Query psy17135
Match_columns 106
No_of_seqs 133 out of 1325
Neff 11.4
Searched_HMMs 46136
Date Fri Aug 16 22:46:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17135.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17135hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0286|consensus 99.8 3E-20 6.5E-25 108.8 8.5 97 1-106 160-257 (343)
2 KOG0263|consensus 99.8 6.2E-20 1.3E-24 117.8 10.2 96 2-106 552-647 (707)
3 KOG0263|consensus 99.8 4.1E-20 8.8E-25 118.6 8.6 96 2-106 510-605 (707)
4 KOG0266|consensus 99.8 1.5E-19 3.3E-24 114.3 10.1 96 2-106 220-316 (456)
5 KOG0272|consensus 99.8 3.4E-20 7.3E-25 112.7 6.7 95 3-106 321-416 (459)
6 KOG0272|consensus 99.8 3.1E-20 6.8E-25 112.8 5.6 94 4-106 280-373 (459)
7 KOG0271|consensus 99.8 9.3E-20 2E-24 110.1 7.3 96 2-106 132-233 (480)
8 KOG0285|consensus 99.8 1.5E-19 3.2E-24 108.6 7.9 96 2-106 168-263 (460)
9 KOG0284|consensus 99.8 1.9E-19 4.2E-24 109.2 8.3 96 2-106 197-292 (464)
10 KOG0302|consensus 99.8 3.7E-19 8.1E-24 107.2 8.6 98 2-106 275-376 (440)
11 KOG0264|consensus 99.8 1.3E-18 2.9E-23 106.1 9.4 98 3-106 246-345 (422)
12 KOG0279|consensus 99.8 3.1E-18 6.8E-23 99.8 9.3 99 2-106 122-220 (315)
13 PTZ00421 coronin; Provisional 99.8 3.7E-18 8.1E-23 108.7 10.1 98 3-106 94-196 (493)
14 KOG0273|consensus 99.8 3E-18 6.5E-23 105.6 8.9 99 2-106 376-480 (524)
15 KOG0276|consensus 99.8 3.1E-18 6.7E-23 108.8 8.6 97 3-106 159-255 (794)
16 KOG0279|consensus 99.8 1.1E-17 2.3E-22 97.7 9.1 97 2-106 80-178 (315)
17 KOG0295|consensus 99.8 8.3E-18 1.8E-22 101.0 8.5 95 3-106 310-404 (406)
18 KOG0286|consensus 99.8 1.7E-17 3.8E-22 97.4 9.2 98 2-106 204-301 (343)
19 KOG0319|consensus 99.7 1.3E-17 2.8E-22 107.1 9.1 97 1-106 521-617 (775)
20 KOG0271|consensus 99.7 7.5E-18 1.6E-22 102.0 7.2 93 5-106 387-479 (480)
21 KOG0316|consensus 99.7 1.3E-17 2.9E-22 95.7 7.6 97 1-106 33-129 (307)
22 KOG0275|consensus 99.7 5.4E-18 1.2E-22 101.3 5.9 96 3-106 281-376 (508)
23 KOG0295|consensus 99.7 3.1E-17 6.7E-22 98.6 8.8 99 2-106 252-362 (406)
24 KOG0269|consensus 99.7 3.6E-17 7.9E-22 105.6 8.1 97 2-106 151-248 (839)
25 KOG0277|consensus 99.7 1.8E-17 3.9E-22 95.9 5.6 96 3-106 166-263 (311)
26 KOG0266|consensus 99.7 9E-17 1.9E-21 101.9 9.3 94 4-106 178-274 (456)
27 KOG0293|consensus 99.7 1.2E-17 2.6E-22 101.9 5.1 97 4-106 414-511 (519)
28 KOG0296|consensus 99.7 9.3E-17 2E-21 96.5 8.2 91 5-106 306-396 (399)
29 KOG0277|consensus 99.7 3.1E-17 6.8E-22 94.9 6.0 98 2-106 78-176 (311)
30 KOG0291|consensus 99.7 1.2E-16 2.5E-21 103.3 9.2 94 4-106 327-420 (893)
31 KOG0291|consensus 99.7 7.4E-17 1.6E-21 104.2 8.2 96 3-106 410-506 (893)
32 KOG0292|consensus 99.7 5.6E-17 1.2E-21 106.5 7.7 95 3-106 69-163 (1202)
33 PTZ00420 coronin; Provisional 99.7 3E-16 6.5E-21 101.1 9.6 98 2-106 92-195 (568)
34 KOG0282|consensus 99.7 1.5E-16 3.2E-21 98.3 7.7 96 2-106 275-370 (503)
35 KOG0645|consensus 99.7 7.2E-16 1.6E-20 89.9 9.5 97 2-106 32-133 (312)
36 KOG0278|consensus 99.7 4.2E-16 9E-21 90.4 8.3 97 3-106 161-295 (334)
37 KOG0315|consensus 99.7 4.6E-16 1E-20 90.0 8.4 94 5-106 59-152 (311)
38 KOG0315|consensus 99.7 3.3E-16 7.1E-21 90.6 7.8 94 3-106 16-111 (311)
39 KOG0292|consensus 99.7 1.2E-16 2.5E-21 105.0 6.6 96 2-106 26-121 (1202)
40 KOG0285|consensus 99.7 2.1E-16 4.5E-21 95.3 6.7 95 3-106 211-305 (460)
41 KOG0647|consensus 99.7 7.4E-16 1.6E-20 91.0 8.6 96 3-106 46-143 (347)
42 KOG0772|consensus 99.7 2.7E-16 5.8E-21 98.3 6.9 101 1-106 285-392 (641)
43 KOG0319|consensus 99.7 6.3E-16 1.4E-20 99.5 8.6 96 2-106 480-575 (775)
44 KOG4283|consensus 99.7 1.2E-15 2.6E-20 90.2 8.8 98 2-106 119-217 (397)
45 KOG0318|consensus 99.7 1.5E-15 3.2E-20 95.1 9.6 97 1-106 164-263 (603)
46 KOG0281|consensus 99.7 3.5E-16 7.6E-21 94.3 6.1 91 3-106 336-426 (499)
47 KOG0281|consensus 99.6 1E-15 2.3E-20 92.2 7.1 92 2-106 212-303 (499)
48 KOG0276|consensus 99.6 1.7E-15 3.6E-20 96.7 8.0 96 2-106 72-169 (794)
49 KOG0289|consensus 99.6 4.3E-15 9.2E-20 91.3 9.4 97 3-106 321-417 (506)
50 KOG0264|consensus 99.6 2.3E-15 5E-20 92.3 8.0 99 2-106 195-301 (422)
51 KOG0313|consensus 99.6 1.1E-15 2.5E-20 92.4 6.6 94 3-106 277-374 (423)
52 PTZ00421 coronin; Provisional 99.6 6E-15 1.3E-19 94.2 10.2 96 3-106 144-243 (493)
53 KOG0284|consensus 99.6 7.4E-16 1.6E-20 93.9 5.7 95 3-106 156-250 (464)
54 KOG0282|consensus 99.6 8.6E-16 1.9E-20 95.0 6.0 95 2-106 232-328 (503)
55 KOG0267|consensus 99.6 1.1E-15 2.3E-20 98.6 5.8 95 3-106 88-182 (825)
56 PLN00181 protein SPA1-RELATED; 99.6 1.3E-14 2.8E-19 97.3 10.4 94 4-106 552-646 (793)
57 KOG0294|consensus 99.6 8.9E-15 1.9E-19 86.9 8.5 98 2-106 58-155 (362)
58 KOG0273|consensus 99.6 1.2E-14 2.5E-19 90.1 9.1 96 2-106 334-438 (524)
59 KOG0265|consensus 99.6 1.3E-14 2.8E-19 85.7 8.3 96 2-106 107-202 (338)
60 PTZ00420 coronin; Provisional 99.6 2.4E-14 5.1E-19 92.5 10.2 93 5-106 52-154 (568)
61 KOG1445|consensus 99.6 3.6E-15 7.8E-20 95.7 6.3 97 4-106 647-748 (1012)
62 KOG0313|consensus 99.6 1.8E-14 3.9E-19 87.3 8.0 97 3-106 318-416 (423)
63 KOG0306|consensus 99.6 1E-14 2.2E-19 94.6 7.3 97 1-106 566-662 (888)
64 KOG1034|consensus 99.6 1.8E-14 3.9E-19 86.1 7.6 94 5-106 113-209 (385)
65 KOG0275|consensus 99.6 2.9E-15 6.4E-20 89.8 4.0 97 2-105 230-333 (508)
66 KOG0645|consensus 99.6 9.7E-14 2.1E-18 81.2 9.8 98 2-106 122-223 (312)
67 PLN00181 protein SPA1-RELATED; 99.6 5.7E-14 1.2E-18 94.2 10.1 97 3-106 501-604 (793)
68 KOG0316|consensus 99.6 6.4E-14 1.4E-18 80.8 8.8 100 2-106 76-211 (307)
69 KOG0265|consensus 99.6 2.2E-14 4.8E-19 84.7 7.0 94 3-106 151-244 (338)
70 KOG0643|consensus 99.6 5.6E-14 1.2E-18 82.2 8.3 99 1-106 68-218 (327)
71 cd00200 WD40 WD40 domain, foun 99.5 1.3E-13 2.9E-18 81.0 10.1 94 4-106 196-289 (289)
72 KOG0303|consensus 99.5 3.1E-14 6.7E-19 86.8 7.4 98 2-106 99-201 (472)
73 KOG0283|consensus 99.5 3.4E-14 7.3E-19 92.3 7.8 95 2-106 385-479 (712)
74 KOG0274|consensus 99.5 5.8E-14 1.3E-18 90.3 8.8 91 4-106 308-398 (537)
75 KOG0640|consensus 99.5 3.8E-14 8.2E-19 84.5 7.1 101 2-106 189-289 (430)
76 KOG0640|consensus 99.5 6.3E-14 1.4E-18 83.6 7.8 95 6-106 237-333 (430)
77 KOG4283|consensus 99.5 4E-14 8.7E-19 83.9 6.7 99 4-106 165-274 (397)
78 KOG0274|consensus 99.5 8.3E-14 1.8E-18 89.6 8.6 91 3-106 267-357 (537)
79 KOG0318|consensus 99.5 2.8E-13 6.1E-18 85.1 10.3 101 3-106 208-348 (603)
80 KOG0310|consensus 99.5 4.3E-14 9.3E-19 87.7 6.6 95 4-106 87-182 (487)
81 KOG0269|consensus 99.5 4.7E-14 1E-18 91.6 7.0 99 2-106 105-205 (839)
82 KOG0288|consensus 99.5 1.2E-13 2.5E-18 84.6 8.3 100 2-106 358-459 (459)
83 KOG1007|consensus 99.5 5.3E-14 1.2E-18 83.1 6.6 96 4-106 190-287 (370)
84 KOG1407|consensus 99.5 2.7E-13 5.9E-18 79.1 9.2 95 2-106 82-217 (313)
85 KOG0308|consensus 99.5 1.1E-13 2.4E-18 88.7 8.2 95 5-106 138-241 (735)
86 KOG0310|consensus 99.5 2.1E-13 4.5E-18 84.7 8.8 94 3-106 129-223 (487)
87 KOG0302|consensus 99.5 1.2E-13 2.5E-18 83.9 7.4 95 6-106 233-330 (440)
88 KOG0639|consensus 99.5 6.5E-14 1.4E-18 87.9 6.5 92 6-106 486-579 (705)
89 KOG0283|consensus 99.5 5.4E-14 1.2E-18 91.4 6.0 70 28-106 368-438 (712)
90 KOG0322|consensus 99.5 1.2E-13 2.6E-18 80.7 6.8 96 4-106 224-321 (323)
91 KOG0268|consensus 99.5 4.6E-14 1E-18 85.3 5.2 93 3-105 206-299 (433)
92 KOG0305|consensus 99.5 7.1E-13 1.5E-17 83.8 10.2 96 3-106 364-459 (484)
93 cd00200 WD40 WD40 domain, foun 99.5 8.1E-13 1.8E-17 77.7 9.9 93 5-106 113-205 (289)
94 KOG0306|consensus 99.5 4.3E-13 9.3E-18 87.3 8.4 93 3-106 390-482 (888)
95 KOG0305|consensus 99.5 2.8E-13 6.1E-18 85.6 6.7 96 3-106 276-374 (484)
96 KOG0270|consensus 99.5 2.2E-13 4.8E-18 83.9 5.9 73 28-106 242-315 (463)
97 KOG0301|consensus 99.5 5.3E-13 1.1E-17 86.0 7.8 92 2-106 156-247 (745)
98 KOG0289|consensus 99.4 1.3E-12 2.9E-17 80.6 9.1 96 2-105 364-459 (506)
99 KOG1539|consensus 99.4 3.6E-13 7.8E-18 88.2 7.0 96 1-106 509-604 (910)
100 KOG0641|consensus 99.4 2.8E-12 6.1E-17 74.0 9.8 97 3-106 200-301 (350)
101 KOG0308|consensus 99.4 9.5E-13 2.1E-17 84.5 8.5 91 5-104 191-281 (735)
102 KOG0296|consensus 99.4 1.2E-12 2.6E-17 79.2 8.4 92 6-106 127-218 (399)
103 KOG1273|consensus 99.4 6.9E-13 1.5E-17 79.3 6.9 69 31-106 25-93 (405)
104 KOG1408|consensus 99.4 1.3E-12 2.8E-17 85.1 8.5 95 5-106 616-711 (1080)
105 KOG1188|consensus 99.4 1.2E-12 2.6E-17 78.7 7.6 98 2-106 89-194 (376)
106 KOG2111|consensus 99.4 2.7E-12 5.9E-17 76.5 8.9 96 5-105 157-253 (346)
107 KOG0267|consensus 99.4 2.2E-13 4.7E-18 88.2 4.5 97 1-106 128-224 (825)
108 KOG1446|consensus 99.4 4E-12 8.7E-17 75.5 9.3 98 2-106 31-128 (311)
109 KOG0270|consensus 99.4 4.1E-12 9E-17 78.4 9.4 95 3-106 262-358 (463)
110 KOG0268|consensus 99.4 6.2E-13 1.3E-17 80.5 5.4 95 4-106 248-343 (433)
111 KOG2110|consensus 99.4 9.2E-12 2E-16 75.5 9.5 96 4-106 150-246 (391)
112 KOG0300|consensus 99.4 2.4E-12 5.1E-17 77.4 6.6 93 4-106 291-384 (481)
113 KOG1332|consensus 99.4 7.7E-12 1.7E-16 72.6 8.4 99 2-105 28-131 (299)
114 KOG0288|consensus 99.4 6.9E-12 1.5E-16 77.0 8.6 97 4-106 319-415 (459)
115 KOG2096|consensus 99.4 5.3E-12 1.2E-16 75.7 7.9 96 1-106 203-306 (420)
116 KOG1407|consensus 99.4 5.2E-12 1.1E-16 73.8 7.4 91 5-104 167-257 (313)
117 KOG0301|consensus 99.4 7.6E-12 1.6E-16 80.8 8.8 91 2-105 195-285 (745)
118 KOG0293|consensus 99.4 6.7E-12 1.4E-16 77.4 8.1 98 3-106 242-340 (519)
119 KOG0646|consensus 99.4 1.3E-11 2.7E-16 76.7 9.2 97 2-106 193-305 (476)
120 KOG0290|consensus 99.4 1.3E-11 2.8E-16 73.3 8.6 103 2-106 168-316 (364)
121 KOG1539|consensus 99.3 6.7E-12 1.4E-16 82.5 7.8 92 4-105 553-645 (910)
122 KOG0639|consensus 99.3 3.1E-12 6.6E-17 80.6 5.9 93 2-104 526-618 (705)
123 KOG2445|consensus 99.3 2E-11 4.3E-16 72.8 8.9 100 2-106 30-142 (361)
124 KOG1036|consensus 99.3 1.1E-11 2.3E-16 73.7 7.7 90 5-106 33-122 (323)
125 KOG0321|consensus 99.3 9.8E-12 2.1E-16 79.8 7.2 103 2-106 117-246 (720)
126 KOG0294|consensus 99.3 4.6E-11 1E-15 71.4 9.1 96 4-106 146-279 (362)
127 KOG1332|consensus 99.3 1.6E-11 3.5E-16 71.3 6.5 100 2-106 75-191 (299)
128 KOG1446|consensus 99.3 6.7E-11 1.5E-15 70.4 9.1 91 5-106 78-168 (311)
129 KOG1007|consensus 99.3 2.1E-11 4.5E-16 72.4 6.5 99 2-106 139-243 (370)
130 KOG1274|consensus 99.3 6.1E-11 1.3E-15 78.7 9.3 99 3-106 156-260 (933)
131 KOG0299|consensus 99.3 2.8E-11 6E-16 75.2 6.9 95 3-106 220-314 (479)
132 PF08662 eIF2A: Eukaryotic tra 99.3 1.1E-10 2.3E-15 66.9 9.0 87 6-106 82-177 (194)
133 PF00400 WD40: WD domain, G-be 99.3 1.4E-11 3E-16 52.9 4.2 38 65-106 2-39 (39)
134 KOG1408|consensus 99.3 1.4E-11 3E-16 80.5 5.7 69 31-106 461-532 (1080)
135 KOG0772|consensus 99.3 2.7E-11 5.8E-16 76.5 6.6 77 28-106 267-345 (641)
136 KOG0321|consensus 99.2 1.4E-11 3.1E-16 79.1 5.3 96 4-106 71-173 (720)
137 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 2.5E-10 5.4E-15 68.4 10.1 94 3-106 7-101 (300)
138 KOG1036|consensus 99.2 1.7E-10 3.8E-15 68.6 9.0 90 4-106 72-161 (323)
139 KOG0278|consensus 99.2 8E-11 1.7E-15 68.8 7.4 67 31-106 186-252 (334)
140 KOG4378|consensus 99.2 1.3E-10 2.8E-15 73.4 8.5 95 4-106 184-278 (673)
141 KOG0642|consensus 99.2 4.6E-11 1E-15 75.7 6.5 98 2-106 311-424 (577)
142 KOG0303|consensus 99.2 1.3E-10 2.9E-15 71.4 8.2 96 2-106 149-247 (472)
143 KOG0646|consensus 99.2 4.1E-11 8.8E-16 74.5 5.9 90 7-106 61-151 (476)
144 KOG0299|consensus 99.2 1.4E-10 3.1E-15 72.1 8.1 97 3-106 160-272 (479)
145 KOG0973|consensus 99.2 8E-11 1.7E-15 78.9 7.4 96 4-106 34-157 (942)
146 KOG2110|consensus 99.2 3.4E-10 7.4E-15 68.9 9.4 94 7-105 106-201 (391)
147 KOG0307|consensus 99.2 5.1E-11 1.1E-15 80.3 6.4 97 4-106 181-282 (1049)
148 KOG0973|consensus 99.2 1.2E-10 2.7E-15 78.0 7.8 96 4-106 88-199 (942)
149 KOG2394|consensus 99.2 1.3E-10 2.8E-15 73.7 7.1 71 29-106 290-360 (636)
150 KOG1009|consensus 99.2 1.2E-10 2.7E-15 71.5 6.4 98 2-106 31-151 (434)
151 KOG0644|consensus 99.2 4.2E-11 9.2E-16 79.3 4.0 93 1-106 206-298 (1113)
152 KOG0647|consensus 99.1 2.9E-10 6.2E-15 67.8 7.0 72 29-106 27-100 (347)
153 KOG1445|consensus 99.1 3E-10 6.4E-15 73.8 7.3 98 2-106 97-198 (1012)
154 TIGR03866 PQQ_ABC_repeats PQQ- 99.1 2E-09 4.2E-14 64.6 10.4 96 4-106 176-277 (300)
155 KOG0649|consensus 99.1 3.2E-10 7E-15 66.1 6.4 97 3-106 77-184 (325)
156 KOG2048|consensus 99.1 1.1E-09 2.4E-14 70.9 9.2 98 2-106 85-182 (691)
157 KOG0300|consensus 99.1 2.8E-10 6.1E-15 68.7 6.0 72 28-106 147-218 (481)
158 KOG4328|consensus 99.1 4.7E-10 1E-14 69.9 7.1 92 7-106 301-397 (498)
159 KOG1063|consensus 99.1 2.9E-10 6.2E-15 73.8 6.2 92 6-106 551-646 (764)
160 KOG0649|consensus 99.1 2.2E-09 4.8E-14 62.7 8.7 65 4-73 133-197 (325)
161 KOG1272|consensus 99.1 3.9E-10 8.5E-15 70.6 5.8 95 3-106 227-321 (545)
162 KOG2048|consensus 99.1 2.8E-09 6.1E-14 69.1 9.6 96 3-105 172-272 (691)
163 KOG0643|consensus 99.1 1.1E-09 2.4E-14 64.5 7.2 76 24-106 5-80 (327)
164 KOG3881|consensus 99.1 1.5E-09 3.3E-14 66.5 7.5 96 2-106 221-318 (412)
165 KOG0307|consensus 99.0 8.5E-10 1.8E-14 74.7 6.8 98 3-106 135-238 (1049)
166 KOG2445|consensus 99.0 1.6E-09 3.5E-14 64.9 7.1 71 29-106 13-89 (361)
167 KOG1273|consensus 99.0 1.4E-09 2.9E-14 65.5 6.5 77 4-90 42-118 (405)
168 KOG0641|consensus 99.0 1.1E-08 2.4E-13 59.4 9.2 94 3-105 249-346 (350)
169 KOG0290|consensus 99.0 7.8E-09 1.7E-13 61.7 8.5 96 5-106 119-225 (364)
170 KOG1587|consensus 99.0 1.3E-08 2.9E-13 66.2 10.1 98 4-106 219-321 (555)
171 KOG2106|consensus 99.0 8.8E-09 1.9E-13 65.4 8.9 91 1-105 384-474 (626)
172 KOG1034|consensus 99.0 9.9E-09 2.1E-13 62.1 8.5 98 5-106 62-164 (385)
173 KOG0771|consensus 99.0 2E-09 4.3E-14 66.3 5.6 66 33-106 148-213 (398)
174 KOG2055|consensus 99.0 6.5E-09 1.4E-13 65.1 7.9 94 4-106 322-415 (514)
175 KOG1274|consensus 99.0 8.3E-09 1.8E-13 69.0 8.8 93 2-106 71-166 (933)
176 KOG2096|consensus 99.0 1.1E-08 2.4E-13 61.8 8.5 58 44-106 199-256 (420)
177 KOG2394|consensus 99.0 1.7E-09 3.8E-14 68.8 5.2 75 4-87 309-383 (636)
178 COG2319 FOG: WD40 repeat [Gene 98.9 1.7E-08 3.8E-13 61.9 9.5 94 4-106 131-227 (466)
179 KOG1310|consensus 98.9 6.6E-09 1.4E-13 66.6 7.4 98 3-106 68-176 (758)
180 PF08662 eIF2A: Eukaryotic tra 98.9 1.8E-08 4E-13 57.8 8.6 68 31-106 61-131 (194)
181 KOG4328|consensus 98.9 2.5E-09 5.3E-14 66.8 5.1 98 2-106 252-351 (498)
182 KOG4378|consensus 98.9 6.7E-09 1.5E-13 65.9 6.7 95 4-106 98-193 (673)
183 KOG1524|consensus 98.9 7.4E-09 1.6E-13 66.3 6.0 98 3-106 81-214 (737)
184 KOG2055|consensus 98.9 3.9E-08 8.4E-13 61.8 9.0 100 3-106 362-510 (514)
185 KOG4714|consensus 98.9 5.1E-09 1.1E-13 61.6 4.9 69 32-106 182-252 (319)
186 KOG0974|consensus 98.9 9.8E-09 2.1E-13 69.2 6.3 94 3-106 193-286 (967)
187 KOG1310|consensus 98.8 1.5E-08 3.3E-13 65.0 6.4 72 28-106 49-123 (758)
188 KOG1272|consensus 98.8 1.4E-08 3E-13 63.9 6.0 90 4-105 270-359 (545)
189 COG2319 FOG: WD40 repeat [Gene 98.8 1.3E-07 2.7E-12 58.2 10.0 93 5-106 176-269 (466)
190 KOG0974|consensus 98.8 4.7E-08 1E-12 66.1 8.5 90 6-106 154-244 (967)
191 KOG0771|consensus 98.8 4.2E-08 9E-13 60.7 7.6 98 3-106 162-309 (398)
192 KOG0280|consensus 98.8 7E-08 1.5E-12 57.7 8.3 96 5-106 141-239 (339)
193 KOG1517|consensus 98.8 5.5E-08 1.2E-12 66.5 8.6 97 5-106 1185-1285(1387)
194 KOG2106|consensus 98.8 1.8E-07 3.8E-12 59.7 10.0 93 5-106 220-314 (626)
195 KOG0642|consensus 98.8 8.7E-09 1.9E-13 65.8 4.3 71 28-105 293-371 (577)
196 KOG0650|consensus 98.8 8.3E-09 1.8E-13 66.6 4.0 90 7-105 587-677 (733)
197 KOG1523|consensus 98.8 1.3E-07 2.8E-12 57.2 8.3 94 5-105 30-127 (361)
198 KOG0650|consensus 98.7 7E-08 1.5E-12 62.5 7.2 62 28-97 399-462 (733)
199 KOG1188|consensus 98.7 1.4E-07 3.1E-12 57.4 8.0 97 4-106 140-240 (376)
200 PF11768 DUF3312: Protein of u 98.7 1.5E-07 3.2E-12 60.7 8.4 69 29-106 259-327 (545)
201 KOG1009|consensus 98.7 2.6E-08 5.7E-13 61.5 4.6 93 3-102 83-189 (434)
202 KOG2111|consensus 98.7 4.5E-07 9.7E-12 54.8 9.5 95 6-106 112-210 (346)
203 KOG1587|consensus 98.7 7.6E-08 1.7E-12 62.7 6.4 96 3-106 416-514 (555)
204 KOG0322|consensus 98.7 2.9E-07 6.2E-12 54.6 7.8 97 3-106 171-279 (323)
205 KOG2919|consensus 98.7 1.5E-07 3.3E-12 57.1 6.6 90 5-100 271-362 (406)
206 KOG1538|consensus 98.6 1.6E-07 3.4E-12 62.0 6.4 67 32-106 15-81 (1081)
207 KOG2139|consensus 98.6 9.4E-07 2E-11 54.5 9.3 69 30-105 196-265 (445)
208 KOG2695|consensus 98.6 1.3E-07 2.7E-12 57.9 5.2 97 5-106 272-374 (425)
209 KOG1523|consensus 98.6 2E-07 4.3E-12 56.4 5.9 98 2-105 72-173 (361)
210 KOG2919|consensus 98.6 5.4E-07 1.2E-11 54.8 7.7 96 5-106 177-279 (406)
211 KOG1063|consensus 98.6 2E-07 4.4E-12 61.1 6.3 70 30-106 526-600 (764)
212 PF02239 Cytochrom_D1: Cytochr 98.6 4.9E-07 1.1E-11 56.7 7.3 93 3-106 12-106 (369)
213 KOG2139|consensus 98.5 2.5E-06 5.3E-11 52.7 9.2 89 3-101 214-304 (445)
214 KOG1517|consensus 98.5 1.1E-06 2.3E-11 60.6 7.7 100 1-106 1127-1237(1387)
215 KOG1538|consensus 98.5 1.7E-06 3.6E-11 57.4 8.3 95 5-104 31-158 (1081)
216 KOG4547|consensus 98.5 3.9E-06 8.5E-11 54.2 9.1 95 3-106 76-170 (541)
217 smart00320 WD40 WD40 repeats. 98.5 1.1E-06 2.4E-11 36.1 4.9 37 66-106 4-40 (40)
218 KOG2321|consensus 98.4 2.2E-06 4.7E-11 55.7 7.9 94 8-106 156-256 (703)
219 PRK01742 tolB translocation pr 98.4 3.1E-06 6.7E-11 54.1 8.7 90 6-106 227-320 (429)
220 KOG1963|consensus 98.4 3.7E-06 8E-11 56.4 8.7 92 5-104 225-318 (792)
221 PRK11028 6-phosphogluconolacto 98.4 6.6E-06 1.4E-10 50.7 9.5 97 5-106 100-203 (330)
222 KOG4227|consensus 98.4 4E-06 8.8E-11 52.5 8.4 98 3-106 74-177 (609)
223 PF00400 WD40: WD domain, G-be 98.4 2.8E-07 6.2E-12 39.1 2.5 31 27-60 9-39 (39)
224 KOG4497|consensus 98.4 3.5E-06 7.6E-11 51.6 7.7 85 5-98 69-153 (447)
225 KOG0644|consensus 98.4 1.6E-07 3.5E-12 63.0 2.3 72 28-106 189-260 (1113)
226 PRK01742 tolB translocation pr 98.4 9.5E-06 2.1E-10 51.9 9.3 89 6-105 183-275 (429)
227 PRK11028 6-phosphogluconolacto 98.3 1.5E-05 3.3E-10 49.1 9.8 93 4-106 9-108 (330)
228 KOG1334|consensus 98.3 1.4E-06 3E-11 55.4 5.1 63 37-106 402-464 (559)
229 KOG2315|consensus 98.3 9.4E-06 2E-10 52.4 8.6 88 8-106 295-388 (566)
230 KOG4547|consensus 98.3 1.2E-05 2.7E-10 52.0 8.4 92 3-105 120-217 (541)
231 KOG1240|consensus 98.3 2E-05 4.3E-10 55.3 9.6 102 2-106 1066-1223(1431)
232 KOG1524|consensus 98.3 3.5E-06 7.6E-11 54.5 5.6 71 28-102 185-280 (737)
233 KOG0280|consensus 98.3 6.4E-06 1.4E-10 49.6 6.3 80 1-88 182-263 (339)
234 KOG4227|consensus 98.2 1.5E-05 3.2E-10 50.1 8.1 98 3-106 123-223 (609)
235 KOG1963|consensus 98.2 1.3E-05 2.8E-10 54.0 8.1 93 7-106 181-279 (792)
236 KOG1064|consensus 98.2 1.5E-05 3.2E-10 57.9 8.0 97 2-106 2225-2364(2439)
237 KOG1240|consensus 98.2 1.3E-05 2.8E-10 56.1 7.6 75 24-105 1043-1125(1431)
238 PRK03629 tolB translocation pr 98.1 0.00011 2.5E-09 47.1 10.2 90 6-105 222-314 (429)
239 KOG1064|consensus 98.1 4.3E-06 9.3E-11 60.5 3.8 85 4-106 2312-2396(2439)
240 KOG3914|consensus 98.1 3.2E-05 7E-10 48.2 7.1 71 28-106 150-221 (390)
241 PRK02889 tolB translocation pr 98.1 6.6E-05 1.4E-09 48.1 8.8 90 6-105 219-311 (427)
242 PRK04922 tolB translocation pr 98.1 0.00013 2.8E-09 46.8 9.9 89 6-104 227-318 (433)
243 KOG4532|consensus 98.1 9.6E-05 2.1E-09 44.4 8.4 96 3-106 134-231 (344)
244 PRK05137 tolB translocation pr 98.0 0.00017 3.7E-09 46.3 9.8 83 5-97 224-308 (435)
245 KOG3881|consensus 98.0 6.5E-05 1.4E-09 46.9 7.3 95 7-106 173-275 (412)
246 KOG2695|consensus 98.0 1.8E-05 4E-10 48.8 4.8 84 1-87 315-401 (425)
247 KOG4190|consensus 98.0 1.1E-05 2.3E-10 52.8 4.0 66 32-106 738-810 (1034)
248 KOG4497|consensus 98.0 1.6E-05 3.5E-10 48.8 4.2 93 5-106 27-120 (447)
249 KOG2321|consensus 98.0 3.5E-05 7.5E-10 50.4 5.8 95 5-106 195-300 (703)
250 PRK05137 tolB translocation pr 98.0 0.00018 3.9E-09 46.2 9.1 91 6-104 181-272 (435)
251 KOG4640|consensus 97.9 3.8E-05 8.2E-10 50.5 5.8 68 31-106 22-90 (665)
252 PRK02889 tolB translocation pr 97.9 0.00031 6.7E-09 45.1 9.8 89 6-105 175-267 (427)
253 KOG0309|consensus 97.9 1.6E-05 3.5E-10 53.4 3.5 96 2-106 132-230 (1081)
254 PRK04922 tolB translocation pr 97.8 0.00035 7.6E-09 44.9 8.5 89 7-106 184-278 (433)
255 TIGR02800 propeller_TolB tol-p 97.8 0.00085 1.8E-08 42.7 9.9 81 7-97 214-296 (417)
256 KOG1409|consensus 97.7 9.2E-05 2E-09 45.7 4.7 72 28-106 196-268 (404)
257 KOG1334|consensus 97.7 7.3E-05 1.6E-09 48.0 4.2 70 28-104 141-213 (559)
258 COG4946 Uncharacterized protei 97.7 0.0013 2.9E-08 42.6 9.6 88 4-101 378-466 (668)
259 PLN02919 haloacid dehalogenase 97.7 0.0017 3.6E-08 46.3 10.7 70 33-106 807-886 (1057)
260 TIGR02658 TTQ_MADH_Hv methylam 97.7 0.002 4.3E-08 40.6 10.0 94 7-106 27-134 (352)
261 PRK03629 tolB translocation pr 97.6 0.0015 3.3E-08 42.1 9.3 92 7-106 179-273 (429)
262 PF02239 Cytochrom_D1: Cytochr 97.6 0.0013 2.9E-08 41.6 8.8 96 4-104 55-154 (369)
263 PRK04792 tolB translocation pr 97.6 0.0025 5.5E-08 41.3 10.0 88 7-104 242-332 (448)
264 TIGR02800 propeller_TolB tol-p 97.6 0.0026 5.6E-08 40.5 9.9 90 6-105 257-351 (417)
265 PRK00178 tolB translocation pr 97.6 0.0028 6.1E-08 40.7 9.9 85 7-101 223-310 (430)
266 KOG4190|consensus 97.5 0.00027 5.8E-09 46.6 4.8 103 4-106 801-904 (1034)
267 KOG1275|consensus 97.4 0.00042 9.2E-09 47.8 5.3 96 4-106 243-340 (1118)
268 KOG3914|consensus 97.4 0.0023 5E-08 40.3 8.0 68 32-104 110-177 (390)
269 PRK00178 tolB translocation pr 97.4 0.0032 6.9E-08 40.5 9.0 88 8-105 180-272 (430)
270 KOG1409|consensus 97.4 0.00059 1.3E-08 42.4 5.1 60 1-64 213-272 (404)
271 KOG2315|consensus 97.4 0.0043 9.3E-08 40.7 9.1 91 5-106 249-342 (566)
272 KOG4532|consensus 97.4 0.0093 2E-07 36.3 9.5 58 31-91 205-263 (344)
273 PRK04043 tolB translocation pr 97.3 0.0068 1.5E-07 39.1 9.6 88 6-101 212-300 (419)
274 TIGR03300 assembly_YfgL outer 97.3 0.0029 6.2E-08 39.9 7.8 90 5-105 287-376 (377)
275 KOG3617|consensus 97.3 0.00068 1.5E-08 46.9 4.8 68 32-106 62-129 (1416)
276 KOG3621|consensus 97.3 0.0022 4.8E-08 43.1 6.8 97 4-104 52-150 (726)
277 KOG1912|consensus 97.2 0.0066 1.4E-07 41.8 8.7 92 6-103 88-181 (1062)
278 KOG1645|consensus 97.2 0.0022 4.8E-08 40.7 6.1 71 29-106 193-264 (463)
279 KOG1354|consensus 97.2 0.0036 7.7E-08 39.2 6.7 100 3-106 232-357 (433)
280 PF11768 DUF3312: Protein of u 97.2 0.003 6.6E-08 41.6 6.6 54 4-64 278-331 (545)
281 PRK01029 tolB translocation pr 97.2 0.012 2.5E-07 38.1 9.3 93 7-105 211-308 (428)
282 PF12894 Apc4_WD40: Anaphase-p 97.1 0.0018 4E-08 28.7 4.1 27 79-105 12-38 (47)
283 smart00320 WD40 WD40 repeats. 97.1 0.0011 2.3E-08 26.5 3.0 29 29-60 12-40 (40)
284 PRK04792 tolB translocation pr 97.0 0.021 4.5E-07 37.2 9.5 87 8-104 199-288 (448)
285 PF08553 VID27: VID27 cytoplas 97.0 0.021 4.7E-07 39.7 9.8 87 4-98 549-638 (794)
286 KOG4714|consensus 97.0 0.007 1.5E-07 36.6 6.6 57 4-63 199-255 (319)
287 TIGR02658 TTQ_MADH_Hv methylam 97.0 0.037 8.1E-07 35.1 9.9 66 35-106 253-328 (352)
288 PF13360 PQQ_2: PQQ-like domai 96.9 0.0054 1.2E-07 36.0 5.9 64 5-72 1-64 (238)
289 KOG2041|consensus 96.9 0.0048 1E-07 42.2 6.0 69 30-105 15-98 (1189)
290 KOG2444|consensus 96.8 0.0085 1.8E-07 35.4 5.9 96 4-106 77-175 (238)
291 KOG1008|consensus 96.8 0.001 2.2E-08 44.5 2.1 93 4-106 126-223 (783)
292 PRK01029 tolB translocation pr 96.7 0.027 5.9E-07 36.5 8.4 68 33-106 284-357 (428)
293 KOG2314|consensus 96.7 0.0098 2.1E-07 39.5 6.3 90 6-100 469-559 (698)
294 PF08553 VID27: VID27 cytoplas 96.7 0.066 1.4E-06 37.4 10.3 97 4-106 501-604 (794)
295 PLN02919 haloacid dehalogenase 96.7 0.066 1.4E-06 38.7 10.4 99 5-106 703-831 (1057)
296 KOG0309|consensus 96.6 0.0035 7.5E-08 42.9 3.8 94 7-106 91-186 (1081)
297 KOG4640|consensus 96.5 0.019 4.2E-07 38.5 6.6 74 5-87 40-114 (665)
298 KOG2041|consensus 96.5 0.039 8.4E-07 38.1 8.0 95 4-103 33-140 (1189)
299 KOG1275|consensus 96.5 0.025 5.4E-07 39.8 7.2 48 47-100 190-237 (1118)
300 KOG2314|consensus 96.5 0.018 3.8E-07 38.3 6.2 81 7-95 282-363 (698)
301 KOG0882|consensus 96.4 0.028 6.1E-07 36.5 6.7 99 5-106 120-229 (558)
302 KOG1354|consensus 96.4 0.0067 1.4E-07 38.0 3.9 99 5-106 183-299 (433)
303 PF13360 PQQ_2: PQQ-like domai 96.4 0.053 1.2E-06 31.8 7.6 93 5-105 44-137 (238)
304 PF07433 DUF1513: Protein of u 96.2 0.071 1.5E-06 33.1 7.5 86 4-96 25-116 (305)
305 COG0823 TolB Periplasmic compo 96.2 0.053 1.2E-06 35.3 7.2 89 7-105 218-309 (425)
306 PF10282 Lactonase: Lactonase, 96.2 0.14 3E-06 32.3 8.9 96 4-105 211-319 (345)
307 TIGR03300 assembly_YfgL outer 96.2 0.14 3.1E-06 32.4 9.0 60 5-71 73-132 (377)
308 KOG2066|consensus 96.2 0.022 4.8E-07 39.2 5.5 55 44-104 83-142 (846)
309 PF14783 BBS2_Mid: Ciliary BBS 96.1 0.077 1.7E-06 28.0 7.0 52 47-106 18-69 (111)
310 KOG1832|consensus 96.0 0.012 2.6E-07 41.4 4.0 63 28-97 1100-1162(1516)
311 KOG1912|consensus 95.9 0.04 8.7E-07 38.3 5.8 98 4-106 444-549 (1062)
312 COG5170 CDC55 Serine/threonine 95.9 0.016 3.4E-07 36.1 3.6 72 32-106 224-307 (460)
313 PRK11138 outer membrane biogen 95.9 0.19 4.1E-06 32.2 8.6 89 5-105 302-391 (394)
314 PRK02888 nitrous-oxide reducta 95.7 0.26 5.7E-06 33.7 9.0 48 54-106 296-349 (635)
315 PRK02888 nitrous-oxide reducta 95.7 0.33 7.1E-06 33.3 9.2 92 5-106 294-402 (635)
316 PF12894 Apc4_WD40: Anaphase-p 95.5 0.039 8.3E-07 24.4 3.3 32 31-66 13-44 (47)
317 PRK04043 tolB translocation pr 95.5 0.39 8.4E-06 31.3 9.6 82 5-98 255-338 (419)
318 COG2706 3-carboxymuconate cycl 95.4 0.37 8.1E-06 30.5 9.1 94 5-105 109-218 (346)
319 KOG1920|consensus 95.3 0.25 5.4E-06 36.0 8.1 93 4-105 218-319 (1265)
320 PF07569 Hira: TUP1-like enhan 95.3 0.31 6.6E-06 28.9 8.2 66 37-106 18-93 (219)
321 COG2706 3-carboxymuconate cycl 95.2 0.42 9.2E-06 30.2 9.5 96 2-104 11-115 (346)
322 PF04762 IKI3: IKI3 family; I 95.2 0.21 4.5E-06 35.8 7.6 67 30-104 76-146 (928)
323 PF15492 Nbas_N: Neuroblastoma 95.2 0.054 1.2E-06 33.1 4.1 28 79-106 230-257 (282)
324 KOG2079|consensus 95.1 0.062 1.3E-06 38.5 4.6 57 47-106 102-158 (1206)
325 PF10282 Lactonase: Lactonase, 95.0 0.41 8.8E-06 30.2 7.9 92 6-105 12-114 (345)
326 KOG2395|consensus 95.0 0.46 1E-05 32.0 8.1 98 5-106 354-457 (644)
327 COG5170 CDC55 Serine/threonine 95.0 0.082 1.8E-06 33.1 4.6 97 1-101 238-360 (460)
328 PF05694 SBP56: 56kDa selenium 94.9 0.2 4.4E-06 32.8 6.4 95 6-106 221-340 (461)
329 KOG2066|consensus 94.9 0.26 5.7E-06 34.4 7.1 94 2-106 88-185 (846)
330 COG4946 Uncharacterized protei 94.8 0.76 1.6E-05 30.7 9.2 53 47-104 374-427 (668)
331 PF06433 Me-amine-dh_H: Methyl 94.7 0.12 2.7E-06 32.6 5.0 65 4-72 266-330 (342)
332 PF04762 IKI3: IKI3 family; I 94.7 0.65 1.4E-05 33.5 8.8 91 7-105 237-330 (928)
333 KOG2079|consensus 94.7 0.22 4.8E-06 35.9 6.4 69 29-101 130-198 (1206)
334 PF15492 Nbas_N: Neuroblastoma 94.5 0.53 1.1E-05 29.0 7.1 58 48-106 12-71 (282)
335 KOG1645|consensus 94.4 0.33 7.1E-06 31.4 6.3 55 5-64 214-268 (463)
336 PF12234 Rav1p_C: RAVE protein 94.3 0.94 2E-05 31.3 8.5 52 50-105 47-101 (631)
337 COG5354 Uncharacterized protei 94.3 0.85 1.8E-05 30.5 8.0 90 6-106 254-346 (561)
338 COG5354 Uncharacterized protei 94.1 0.27 5.8E-06 32.7 5.6 60 32-101 35-94 (561)
339 KOG3630|consensus 93.9 0.16 3.5E-06 36.9 4.6 94 5-105 122-225 (1405)
340 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.8 1.1 2.3E-05 30.3 8.2 63 5-73 439-501 (527)
341 KOG2395|consensus 93.8 1.4 3.1E-05 29.8 8.5 47 47-97 444-490 (644)
342 PF00930 DPPIV_N: Dipeptidyl p 93.4 0.33 7.2E-06 30.7 5.2 87 6-99 22-121 (353)
343 PF10313 DUF2415: Uncharacteri 93.2 0.34 7.4E-06 21.0 4.2 33 32-64 3-35 (43)
344 KOG1916|consensus 92.1 0.2 4.4E-06 35.7 3.1 72 33-105 184-262 (1283)
345 PF14783 BBS2_Mid: Ciliary BBS 92.0 1.1 2.3E-05 23.8 8.0 85 4-104 22-110 (111)
346 TIGR03074 PQQ_membr_DH membran 91.7 2.9 6.4E-05 29.7 8.2 85 5-92 639-738 (764)
347 PF07676 PD40: WD40-like Beta 91.6 0.52 1.1E-05 19.5 4.6 27 79-105 9-38 (39)
348 PF15390 DUF4613: Domain of un 91.6 3.3 7.1E-05 28.6 8.0 92 7-106 82-184 (671)
349 PF12234 Rav1p_C: RAVE protein 91.5 3.4 7.4E-05 28.7 8.8 88 5-97 49-147 (631)
350 KOG2114|consensus 91.4 1.9 4.2E-05 30.7 7.0 71 33-105 68-152 (933)
351 KOG1008|consensus 91.4 0.19 4E-06 34.4 2.3 68 36-106 202-273 (783)
352 PF11715 Nup160: Nucleoporin N 91.2 0.24 5.3E-06 33.2 2.7 23 47-69 233-255 (547)
353 KOG1920|consensus 91.1 3.9 8.4E-05 30.5 8.3 67 30-104 69-135 (1265)
354 KOG0882|consensus 91.0 3.3 7.2E-05 27.6 8.3 97 4-105 73-171 (558)
355 PF04053 Coatomer_WDAD: Coatom 90.4 1.2 2.6E-05 29.4 5.3 48 47-101 120-167 (443)
356 COG3391 Uncharacterized conser 90.1 3.6 7.8E-05 26.6 9.7 91 5-105 94-187 (381)
357 KOG4649|consensus 90.1 3.1 6.8E-05 25.8 7.0 61 6-71 72-132 (354)
358 PF07433 DUF1513: Protein of u 89.7 3.6 7.7E-05 25.9 9.3 93 4-99 74-183 (305)
359 KOG4499|consensus 89.4 3.5 7.5E-05 25.3 7.1 37 47-87 226-262 (310)
360 KOG4649|consensus 89.1 3.9 8.4E-05 25.5 8.3 54 47-105 66-120 (354)
361 COG0823 TolB Periplasmic compo 88.8 5 0.00011 26.5 7.1 69 32-105 195-265 (425)
362 PF04841 Vps16_N: Vps16, N-ter 88.3 3.4 7.3E-05 27.0 6.1 48 8-62 62-109 (410)
363 PF08450 SGL: SMP-30/Gluconola 88.1 3.9 8.5E-05 24.4 8.8 86 5-99 20-106 (246)
364 PF03178 CPSF_A: CPSF A subuni 87.5 5.1 0.00011 25.0 9.1 92 6-105 106-199 (321)
365 COG3490 Uncharacterized protei 87.1 5.6 0.00012 25.1 7.5 86 5-97 89-180 (366)
366 PF08450 SGL: SMP-30/Gluconola 87.1 4.6 0.0001 24.0 8.0 93 7-106 115-211 (246)
367 PRK11138 outer membrane biogen 87.0 6.2 0.00013 25.4 9.0 64 5-71 77-147 (394)
368 PF06433 Me-amine-dh_H: Methyl 86.2 6.8 0.00015 25.2 8.1 66 6-72 66-136 (342)
369 PF06977 SdiA-regulated: SdiA- 85.9 6 0.00013 24.2 7.8 69 31-105 23-91 (248)
370 PF14779 BBS1: Ciliary BBSome 85.6 6.4 0.00014 24.2 5.9 55 47-105 198-255 (257)
371 cd00216 PQQ_DH Dehydrogenases 85.4 8.8 0.00019 25.7 9.0 65 5-72 364-434 (488)
372 KOG3621|consensus 85.1 3 6.4E-05 29.2 4.7 55 47-105 48-103 (726)
373 PF01011 PQQ: PQQ enzyme repea 84.9 2 4.2E-05 17.7 2.9 25 48-72 4-28 (38)
374 smart00564 PQQ beta-propeller 84.5 1.8 3.8E-05 16.9 2.6 22 47-68 9-30 (33)
375 PF07569 Hira: TUP1-like enhan 83.5 4.9 0.00011 24.0 4.7 20 4-23 29-48 (219)
376 TIGR02276 beta_rpt_yvtn 40-res 83.5 2.3 5E-05 17.5 4.1 26 47-72 7-32 (42)
377 KOG3617|consensus 82.9 5.2 0.00011 29.2 5.2 53 5-62 79-131 (1416)
378 PF02897 Peptidase_S9_N: Proly 81.9 11 0.00025 24.3 8.0 81 7-95 150-243 (414)
379 PF03088 Str_synth: Strictosid 81.7 5.2 0.00011 20.3 4.3 47 48-99 31-78 (89)
380 PF01436 NHL: NHL repeat; Int 81.6 2.4 5.1E-05 16.2 4.1 25 81-105 4-28 (28)
381 PF11715 Nup160: Nucleoporin N 79.3 3.9 8.5E-05 27.6 3.7 27 80-106 216-246 (547)
382 KOG1900|consensus 79.0 13 0.00029 28.2 6.2 90 5-99 97-199 (1311)
383 PF14761 HPS3_N: Hermansky-Pud 78.6 12 0.00026 22.5 5.2 42 51-97 35-78 (215)
384 KOG2444|consensus 78.5 9.6 0.00021 23.1 4.7 16 47-62 73-88 (238)
385 PF04841 Vps16_N: Vps16, N-ter 77.7 17 0.00037 23.9 7.4 46 55-106 62-107 (410)
386 KOG4441|consensus 76.5 22 0.00049 24.6 7.1 85 6-101 300-392 (571)
387 COG5167 VID27 Protein involved 76.3 17 0.00037 25.1 5.8 47 47-97 576-622 (776)
388 PRK13616 lipoprotein LpqB; Pro 76.2 23 0.00051 24.7 9.6 24 79-103 448-471 (591)
389 PF02897 Peptidase_S9_N: Proly 76.1 15 0.00032 23.8 5.5 58 35-97 129-188 (414)
390 KOG3616|consensus 75.2 13 0.00027 27.1 5.1 32 32-66 17-48 (1636)
391 PF10168 Nup88: Nuclear pore c 74.3 29 0.00064 24.9 9.6 28 79-106 147-177 (717)
392 PF08596 Lgl_C: Lethal giant l 73.5 21 0.00046 23.5 5.7 59 47-105 100-170 (395)
393 PHA02713 hypothetical protein; 72.7 28 0.00061 24.0 6.9 83 7-100 432-523 (557)
394 PF14655 RAB3GAP2_N: Rab3 GTPa 71.6 27 0.00059 23.3 7.3 40 32-74 310-349 (415)
395 PF03178 CPSF_A: CPSF A subuni 71.5 22 0.00047 22.3 5.4 86 7-103 62-152 (321)
396 PF15525 DUF4652: Domain of un 70.5 20 0.00042 21.2 8.7 68 4-71 85-157 (200)
397 KOG1832|consensus 68.3 10 0.00022 28.0 3.6 36 67-106 1094-1129(1516)
398 PF00930 DPPIV_N: Dipeptidyl p 68.3 28 0.00062 22.2 6.6 59 35-97 286-346 (353)
399 TIGR02608 delta_60_rpt delta-6 68.1 11 0.00023 17.3 3.0 19 80-98 2-20 (55)
400 KOG2247|consensus 66.7 6.6 0.00014 26.7 2.4 79 5-92 95-173 (615)
401 PF05096 Glu_cyclase_2: Glutam 66.1 29 0.00064 21.6 9.2 89 5-106 66-155 (264)
402 PF14269 Arylsulfotran_2: Aryl 65.1 32 0.0007 21.7 5.7 61 46-106 157-218 (299)
403 KOG3630|consensus 64.5 34 0.00073 26.2 5.5 60 31-94 200-259 (1405)
404 KOG2114|consensus 63.6 58 0.0012 24.1 9.3 44 47-92 140-185 (933)
405 KOG1897|consensus 63.1 63 0.0014 24.3 7.2 50 49-102 843-892 (1096)
406 COG3204 Uncharacterized protei 62.6 38 0.00082 21.6 7.0 68 30-103 86-153 (316)
407 PF08596 Lgl_C: Lethal giant l 60.1 21 0.00045 23.5 3.8 91 5-97 233-325 (395)
408 COG3386 Gluconolactonase [Carb 60.0 28 0.00062 22.0 4.2 27 79-105 163-190 (307)
409 PF14870 PSII_BNR: Photosynthe 58.7 45 0.00097 21.2 8.0 25 79-104 187-211 (302)
410 PF14655 RAB3GAP2_N: Rab3 GTPa 58.6 28 0.00061 23.2 4.2 28 79-106 308-335 (415)
411 TIGR03075 PQQ_enz_alc_DH PQQ-d 57.6 60 0.0013 22.3 8.1 64 5-71 77-147 (527)
412 PF10168 Nup88: Nuclear pore c 56.7 35 0.00076 24.5 4.6 34 31-64 148-181 (717)
413 PF03022 MRJP: Major royal jel 56.3 48 0.001 20.8 6.5 63 4-66 31-100 (287)
414 PF14583 Pectate_lyase22: Olig 55.6 46 0.00099 22.0 4.6 58 11-71 14-76 (386)
415 KOG2280|consensus 55.5 79 0.0017 23.1 6.4 52 5-63 62-113 (829)
416 PF12657 TFIIIC_delta: Transcr 54.9 38 0.00083 19.2 4.3 27 79-105 86-118 (173)
417 PF12768 Rax2: Cortical protei 54.9 49 0.0011 20.8 4.6 40 54-97 16-55 (281)
418 PF13570 PQQ_3: PQQ-like domai 54.3 17 0.00036 14.9 2.4 17 47-63 24-40 (40)
419 PF07995 GSDH: Glucose / Sorbo 53.3 57 0.0012 20.8 6.3 54 47-103 274-330 (331)
420 KOG2280|consensus 53.1 81 0.0018 23.1 5.7 47 54-106 64-110 (829)
421 TIGR03074 PQQ_membr_DH membran 51.9 92 0.002 22.8 7.3 66 5-70 412-485 (764)
422 PHA03098 kelch-like protein; P 51.8 74 0.0016 21.6 7.9 13 7-19 406-418 (534)
423 KOG2377|consensus 51.4 79 0.0017 21.8 7.4 27 79-105 67-93 (657)
424 cd06919 Asp_decarbox Aspartate 51.0 38 0.00082 18.1 3.5 23 5-27 39-61 (111)
425 PF08728 CRT10: CRT10; InterP 49.8 98 0.0021 22.5 6.5 56 47-105 117-192 (717)
426 PF04053 Coatomer_WDAD: Coatom 49.4 46 0.001 22.4 4.1 49 6-62 125-173 (443)
427 PRK05449 aspartate alpha-decar 49.1 44 0.00096 18.3 3.5 23 5-27 40-62 (126)
428 PF12341 DUF3639: Protein of u 48.4 19 0.00041 13.9 3.8 26 79-106 2-27 (27)
429 KOG3616|consensus 48.2 42 0.00091 24.7 3.8 26 80-105 16-41 (1636)
430 COG5308 NUP170 Nuclear pore co 48.0 98 0.0021 23.4 5.5 21 79-99 182-202 (1263)
431 PF10584 Proteasome_A_N: Prote 47.5 7.4 0.00016 14.4 0.2 7 86-92 8-14 (23)
432 COG0853 PanD Aspartate 1-decar 47.5 47 0.001 18.1 3.3 23 5-27 39-61 (126)
433 PF06977 SdiA-regulated: SdiA- 45.7 71 0.0015 19.7 6.7 69 32-104 173-246 (248)
434 PF00780 CNH: CNH domain; Int 44.6 71 0.0015 19.3 6.0 52 47-105 10-61 (275)
435 PF00843 Arena_nucleocap: Aren 44.2 9.6 0.00021 25.5 0.5 16 4-19 149-164 (533)
436 TIGR00223 panD L-aspartate-alp 44.0 55 0.0012 17.9 3.5 23 5-27 40-62 (126)
437 KOG4460|consensus 43.2 1.2E+02 0.0025 21.5 8.4 27 80-106 167-196 (741)
438 COG3490 Uncharacterized protei 42.7 92 0.002 20.1 8.6 92 3-98 136-245 (366)
439 KOG4441|consensus 42.6 1.2E+02 0.0025 21.3 8.2 84 7-101 444-534 (571)
440 cd00216 PQQ_DH Dehydrogenases 42.3 1.1E+02 0.0023 20.8 9.4 66 5-71 118-192 (488)
441 KOG0088|consensus 37.9 39 0.00085 19.5 2.2 18 48-65 82-99 (218)
442 PF02261 Asp_decarbox: Asparta 37.5 70 0.0015 17.3 3.1 23 5-27 40-62 (116)
443 PF14782 BBS2_C: Ciliary BBSom 37.1 64 0.0014 21.7 3.3 26 32-59 17-42 (431)
444 PHA02713 hypothetical protein; 37.0 1.4E+02 0.0031 20.7 8.2 14 7-20 367-380 (557)
445 KOG4460|consensus 36.8 92 0.002 21.9 4.0 42 33-74 169-210 (741)
446 PF05096 Glu_cyclase_2: Glutam 34.2 1.2E+02 0.0026 19.0 6.4 58 5-70 108-165 (264)
447 PF08728 CRT10: CRT10; InterP 33.3 1.9E+02 0.0042 21.1 7.5 58 47-106 180-244 (717)
448 PRK14751 tetracycline resistan 32.3 35 0.00075 12.9 1.0 11 5-15 13-23 (28)
449 PF08801 Nucleoporin_N: Nup133 30.7 90 0.002 20.6 3.3 28 79-106 190-217 (422)
450 KOG1520|consensus 30.1 1E+02 0.0022 20.4 3.3 44 48-96 193-236 (376)
451 KOG1916|consensus 29.3 1.8E+02 0.004 22.2 4.6 35 37-74 243-282 (1283)
452 COG5167 VID27 Protein involved 28.1 2.2E+02 0.0048 20.2 7.2 18 89-106 572-589 (776)
453 PHA03098 kelch-like protein; P 27.7 2E+02 0.0044 19.6 8.1 13 7-19 358-370 (534)
454 PF09081 DUF1921: Domain of un 27.0 58 0.0013 14.5 1.4 11 49-59 40-50 (51)
455 TIGR03606 non_repeat_PQQ dehyd 27.0 1.2E+02 0.0027 20.6 3.4 27 79-105 30-56 (454)
456 KOG1769|consensus 26.9 65 0.0014 16.9 1.7 45 49-93 25-70 (99)
457 PF01731 Arylesterase: Arylest 26.9 97 0.0021 15.6 5.2 51 5-62 34-84 (86)
458 PF02870 Methyltransf_1N: 6-O- 26.4 69 0.0015 15.2 1.8 19 87-105 9-27 (77)
459 PF06739 SBBP: Beta-propeller 26.2 64 0.0014 13.3 3.2 22 79-100 13-34 (38)
460 TIGR02381 cspD cold shock doma 25.5 84 0.0018 14.9 1.9 13 5-17 2-14 (68)
461 PF06200 tify: tify domain; I 24.5 55 0.0012 13.6 1.0 13 48-60 8-20 (36)
462 cd01211 GAPCenA GAPCenA Phosph 24.4 1.4E+02 0.0029 16.5 4.1 26 48-73 45-70 (125)
463 PRK10526 acyl-CoA thioesterase 23.8 99 0.0021 19.4 2.5 25 81-105 261-285 (286)
464 PRK14998 cold shock-like prote 23.3 99 0.0021 15.0 2.0 13 6-18 3-15 (73)
465 PRK09937 stationary phase/star 23.0 1E+02 0.0022 15.0 1.9 14 5-18 2-15 (74)
466 KOG2467|consensus 22.4 89 0.0019 20.9 2.1 17 47-63 344-360 (477)
467 PF08149 BING4CT: BING4CT (NUC 22.2 1.2E+02 0.0027 15.2 3.0 23 79-101 10-32 (80)
468 cd03473 Rieske_CMP_Neu5Ac_hydr 22.0 1.3E+02 0.0029 16.0 2.4 11 58-68 76-86 (107)
469 cd01210 EPS8 Epidermal growth 22.0 1.5E+02 0.0033 16.4 2.6 24 3-26 47-70 (127)
470 PF01394 Clathrin_propel: Clat 21.4 83 0.0018 12.9 1.5 10 5-14 27-36 (37)
471 KOG3535|consensus 21.3 2.8E+02 0.0061 19.0 4.7 26 47-73 95-120 (557)
472 PF10395 Utp8: Utp8 family; I 20.7 2.5E+02 0.0053 20.5 3.9 28 79-106 130-157 (670)
473 cd03444 Thioesterase_II_repeat 20.2 74 0.0016 16.4 1.2 21 80-100 82-102 (104)
474 PF03646 FlaG: FlaG protein; 20.1 86 0.0019 16.2 1.5 19 55-73 69-87 (107)
No 1
>KOG0286|consensus
Probab=99.84 E-value=3e-20 Score=108.84 Aligned_cols=97 Identities=21% Similarity=0.319 Sum_probs=86.8
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
+|.+.|.++-+||+.+++....+.. |...+..+...| ..+. +++|+.|+..++||++.+.+.+.+.+|+ .
T Consensus 160 lT~SGD~TCalWDie~g~~~~~f~G--H~gDV~slsl~p~~~nt---FvSg~cD~~aklWD~R~~~c~qtF~ghe----s 230 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQQTQVFHG--HTGDVMSLSLSPSDGNT---FVSGGCDKSAKLWDVRSGQCVQTFEGHE----S 230 (343)
T ss_pred EecCCCceEEEEEcccceEEEEecC--CcccEEEEecCCCCCCe---EEecccccceeeeeccCcceeEeecccc----c
Confidence 3678999999999999999777775 466677788888 4444 8999999999999999999999999999 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|+++.|.|+|.-+++|+.|++.++||
T Consensus 231 DINsv~ffP~G~afatGSDD~tcRlyD 257 (343)
T KOG0286|consen 231 DINSVRFFPSGDAFATGSDDATCRLYD 257 (343)
T ss_pred ccceEEEccCCCeeeecCCCceeEEEe
Confidence 999999999999999999999999987
No 2
>KOG0263|consensus
Probab=99.83 E-value=6.2e-20 Score=117.75 Aligned_cols=96 Identities=18% Similarity=0.310 Sum_probs=88.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+.+.|.+||+||..+|..++.+.. |.+.+.++.|+|.+.+ |++|+.|+.|++||+.++..+.++.+|. +.+
T Consensus 552 TGSsD~tVRlWDv~~G~~VRiF~G--H~~~V~al~~Sp~Gr~---LaSg~ed~~I~iWDl~~~~~v~~l~~Ht----~ti 622 (707)
T KOG0263|consen 552 TGSSDRTVRLWDVSTGNSVRIFTG--HKGPVTALAFSPCGRY---LASGDEDGLIKIWDLANGSLVKQLKGHT----GTI 622 (707)
T ss_pred cCCCCceEEEEEcCCCcEEEEecC--CCCceEEEEEcCCCce---EeecccCCcEEEEEcCCCcchhhhhccc----Cce
Confidence 467899999999999999888877 4666788999998877 9999999999999999999999999997 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++.|+.++.+|++|+.|.+|++||
T Consensus 623 ~SlsFS~dg~vLasgg~DnsV~lWD 647 (707)
T KOG0263|consen 623 YSLSFSRDGNVLASGGADNSVRLWD 647 (707)
T ss_pred eEEEEecCCCEEEecCCCCeEEEEE
Confidence 9999999999999999999999997
No 3
>KOG0263|consensus
Probab=99.83 E-value=4.1e-20 Score=118.58 Aligned_cols=96 Identities=22% Similarity=0.367 Sum_probs=88.9
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|++-++|......+++.+.+ |.+.+.++.|+|.+.+ +++||.|++||+||+.+|..++.+.+|. +.|
T Consensus 510 tas~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y---~aTGSsD~tVRlWDv~~G~~VRiF~GH~----~~V 580 (707)
T KOG0263|consen 510 TASHDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNY---VATGSSDRTVRLWDVSTGNSVRIFTGHK----GPV 580 (707)
T ss_pred ecCCCceeeeeecccCCchhhhcc--cccccceEEECCcccc---cccCCCCceEEEEEcCCCcEEEEecCCC----Cce
Confidence 346799999999999888777777 4677888999999999 8999999999999999999999999999 999
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++|||+|++|++|+.|+.|.+||
T Consensus 581 ~al~~Sp~Gr~LaSg~ed~~I~iWD 605 (707)
T KOG0263|consen 581 TALAFSPCGRYLASGDEDGLIKIWD 605 (707)
T ss_pred EEEEEcCCCceEeecccCCcEEEEE
Confidence 9999999999999999999999997
No 4
>KOG0266|consensus
Probab=99.82 E-value=1.5e-19 Score=114.35 Aligned_cols=96 Identities=21% Similarity=0.415 Sum_probs=85.2
Q ss_pred CcCCCceEEEEeC-ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTL-LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
+...|++|+|||+ ..+..+..+.. |...+.++.|+|.++. +++|+.|++|++||++++++++.+.+|. ..
T Consensus 220 s~s~D~tiriwd~~~~~~~~~~l~g--H~~~v~~~~f~p~g~~---i~Sgs~D~tvriWd~~~~~~~~~l~~hs----~~ 290 (456)
T KOG0266|consen 220 SGSDDKTLRIWDLKDDGRNLKTLKG--HSTYVTSVAFSPDGNL---LVSGSDDGTVRIWDVRTGECVRKLKGHS----DG 290 (456)
T ss_pred EecCCceEEEeeccCCCeEEEEecC--CCCceEEEEecCCCCE---EEEecCCCcEEEEeccCCeEEEeeeccC----Cc
Confidence 4578999999999 44566555554 5667788999999966 8999999999999999999999999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.+++|++++.++++++.|+.+++||
T Consensus 291 is~~~f~~d~~~l~s~s~d~~i~vwd 316 (456)
T KOG0266|consen 291 ISGLAFSPDGNLLVSASYDGTIRVWD 316 (456)
T ss_pred eEEEEECCCCCEEEEcCCCccEEEEE
Confidence 99999999999999999999999997
No 5
>KOG0272|consensus
Probab=99.82 E-value=3.4e-20 Score=112.70 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=85.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..-|..-+|||++++.++.-+.. |...+..+.|+|.+.. ++||+.|++++|||++..+++.++++|. +-|.
T Consensus 321 GGlD~~~RvWDlRtgr~im~L~g--H~k~I~~V~fsPNGy~---lATgs~Dnt~kVWDLR~r~~ly~ipAH~----nlVS 391 (459)
T KOG0272|consen 321 GGLDSLGRVWDLRTGRCIMFLAG--HIKEILSVAFSPNGYH---LATGSSDNTCKVWDLRMRSELYTIPAHS----NLVS 391 (459)
T ss_pred cCccchhheeecccCcEEEEecc--cccceeeEeECCCceE---EeecCCCCcEEEeeecccccceeccccc----chhh
Confidence 45677789999999999665555 5677888999999988 9999999999999999999999999999 8999
Q ss_pred EEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.|.|+| .|.+|++++.|+++++|.
T Consensus 392 ~Vk~~p~~g~fL~TasyD~t~kiWs 416 (459)
T KOG0272|consen 392 QVKYSPQEGYFLVTASYDNTVKIWS 416 (459)
T ss_pred heEecccCCeEEEEcccCcceeeec
Confidence 999999 788899999999999994
No 6
>KOG0272|consensus
Probab=99.81 E-value=3.1e-20 Score=112.82 Aligned_cols=94 Identities=22% Similarity=0.321 Sum_probs=85.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.-|.+=++||+.++.. .+..+.|...+..+.|.+++.. ++||+.|..-++||+++|.++-.+.+|. ..|..
T Consensus 280 sfD~tWRlWD~~tk~E--lL~QEGHs~~v~~iaf~~DGSL---~~tGGlD~~~RvWDlRtgr~im~L~gH~----k~I~~ 350 (459)
T KOG0272|consen 280 SFDSTWRLWDLETKSE--LLLQEGHSKGVFSIAFQPDGSL---AATGGLDSLGRVWDLRTGRCIMFLAGHI----KEILS 350 (459)
T ss_pred ccccchhhcccccchh--hHhhcccccccceeEecCCCce---eeccCccchhheeecccCcEEEEecccc----cceee
Confidence 4577889999999987 4455556677888999999998 8999999999999999999999999998 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|+|..+++|+.|++++|||
T Consensus 351 V~fsPNGy~lATgs~Dnt~kVWD 373 (459)
T KOG0272|consen 351 VAFSPNGYHLATGSSDNTCKVWD 373 (459)
T ss_pred EeECCCceEEeecCCCCcEEEee
Confidence 99999999999999999999997
No 7
>KOG0271|consensus
Probab=99.81 E-value=9.3e-20 Score=110.13 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=83.4
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~ 80 (106)
+...|.++|+||+.+..+ .+.+..|...+.++.|+|++.. +++|+.||+|++||.++|++ .+.+.+|. ..
T Consensus 132 tGsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~---iASG~~dg~I~lwdpktg~~~g~~l~gH~----K~ 202 (480)
T KOG0271|consen 132 TGSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKK---IASGSKDGSIRLWDPKTGQQIGRALRGHK----KW 202 (480)
T ss_pred ecCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcch---hhccccCCeEEEecCCCCCcccccccCcc----cc
Confidence 457899999999999998 4444446667888999999999 89999999999999999875 56788898 89
Q ss_pred eEEEEEcC-----CCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHP-----SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~-----~~~~~~s~~~d~~i~iwd 106 (106)
|.+++|.| .++.+++++.||.++|||
T Consensus 203 It~Lawep~hl~p~~r~las~skDg~vrIWd 233 (480)
T KOG0271|consen 203 ITALAWEPLHLVPPCRRLASSSKDGSVRIWD 233 (480)
T ss_pred eeEEeecccccCCCccceecccCCCCEEEEE
Confidence 99999975 667899999999999997
No 8
>KOG0285|consensus
Probab=99.81 E-value=1.5e-19 Score=108.61 Aligned_cols=96 Identities=16% Similarity=0.256 Sum_probs=84.7
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|++|.|||+.++++...+.. |-..+..+.+++...+ +++++.|+.|+.||+...+.++.+.+|- ..|
T Consensus 168 tgs~DrtikIwDlatg~LkltltG--hi~~vr~vavS~rHpY---lFs~gedk~VKCwDLe~nkvIR~YhGHl----S~V 238 (460)
T KOG0285|consen 168 TGSADRTIKIWDLATGQLKLTLTG--HIETVRGVAVSKRHPY---LFSAGEDKQVKCWDLEYNKVIRHYHGHL----SGV 238 (460)
T ss_pred ecCCCceeEEEEcccCeEEEeecc--hhheeeeeeecccCce---EEEecCCCeeEEEechhhhhHHHhcccc----cee
Confidence 467899999999999999444444 3444556778888877 8999999999999999999999999999 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++.+|....+++|++|.++++||
T Consensus 239 ~~L~lhPTldvl~t~grDst~RvWD 263 (460)
T KOG0285|consen 239 YCLDLHPTLDVLVTGGRDSTIRVWD 263 (460)
T ss_pred EEEeccccceeEEecCCcceEEEee
Confidence 9999999999999999999999998
No 9
>KOG0284|consensus
Probab=99.81 E-value=1.9e-19 Score=109.22 Aligned_cols=96 Identities=18% Similarity=0.356 Sum_probs=86.7
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+++.||+|+|||....+....+. .|.-.+.++.|+|.... +++++.|..|++||.+++.|+.++..|. ..|
T Consensus 197 t~SdDg~ikiWdf~~~kee~vL~--GHgwdVksvdWHP~kgL---iasgskDnlVKlWDprSg~cl~tlh~HK----ntV 267 (464)
T KOG0284|consen 197 TCSDDGTIKIWDFRMPKEERVLR--GHGWDVKSVDWHPTKGL---IASGSKDNLVKLWDPRSGSCLATLHGHK----NTV 267 (464)
T ss_pred EecCCCeEEEEeccCCchhheec--cCCCCcceeccCCccce---eEEccCCceeEeecCCCcchhhhhhhcc----ceE
Confidence 57899999999999887744443 35667889999999988 8999999999999999999999999998 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.|+|++++|+++|+|..++++|
T Consensus 268 l~~~f~~n~N~Llt~skD~~~kv~D 292 (464)
T KOG0284|consen 268 LAVKFNPNGNWLLTGSKDQSCKVFD 292 (464)
T ss_pred EEEEEcCCCCeeEEccCCceEEEEe
Confidence 9999999999999999999999987
No 10
>KOG0302|consensus
Probab=99.80 E-value=3.7e-19 Score=107.21 Aligned_cols=98 Identities=19% Similarity=0.311 Sum_probs=83.0
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKFD 78 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~ 78 (106)
+++.||+|+|||++.+..-.......|++.++.++|+..... |++|+.||+++|||+++ ++++.++.-|.
T Consensus 275 ScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~l---LasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk---- 347 (440)
T KOG0302|consen 275 SCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPL---LASGGDDGTLSIWDLRQFKSGQPVATFKYHK---- 347 (440)
T ss_pred eeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcce---eeecCCCceEEEEEhhhccCCCcceeEEecc----
Confidence 478999999999998844334444567788899999998885 89999999999999985 46788888888
Q ss_pred CCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..|+++.|+| +...+++++.|..|.+||
T Consensus 348 ~pItsieW~p~e~s~iaasg~D~QitiWD 376 (440)
T KOG0302|consen 348 APITSIEWHPHEDSVIAASGEDNQITIWD 376 (440)
T ss_pred CCeeEEEeccccCceEEeccCCCcEEEEE
Confidence 8999999999 455689999999999997
No 11
>KOG0264|consensus
Probab=99.79 E-value=1.3e-18 Score=106.15 Aligned_cols=98 Identities=17% Similarity=0.323 Sum_probs=83.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v 81 (106)
...|+.+.|||+++++.-.......|...+.++.|+|.+... |+||+.|++|++||+++ .+++..+.+|. ..|
T Consensus 246 v~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~i--lAT~S~D~tV~LwDlRnL~~~lh~~e~H~----dev 319 (422)
T KOG0264|consen 246 VGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFI--LATGSADKTVALWDLRNLNKPLHTFEGHE----DEV 319 (422)
T ss_pred ecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCce--EEeccCCCcEEEeechhcccCceeccCCC----cce
Confidence 457899999999964222245555677889999999999876 89999999999999998 46788899998 999
Q ss_pred EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
+.+.|+| ....++|++.|+.+.+||
T Consensus 320 ~~V~WSPh~etvLASSg~D~rl~vWD 345 (422)
T KOG0264|consen 320 FQVEWSPHNETVLASSGTDRRLNVWD 345 (422)
T ss_pred EEEEeCCCCCceeEecccCCcEEEEe
Confidence 9999999 556799999999999997
No 12
>KOG0279|consensus
Probab=99.78 E-value=3.1e-18 Score=99.83 Aligned_cols=99 Identities=19% Similarity=0.293 Sum_probs=81.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+.++|.+|.+||+..+.... .....+...+.++.|+|...... +++++.|++|++||+++.+....+.+|. ..+
T Consensus 122 SGSrDkTiklwnt~g~ck~t-~~~~~~~~WVscvrfsP~~~~p~-Ivs~s~DktvKvWnl~~~~l~~~~~gh~----~~v 195 (315)
T KOG0279|consen 122 SGSRDKTIKLWNTLGVCKYT-IHEDSHREWVSCVRFSPNESNPI-IVSASWDKTVKVWNLRNCQLRTTFIGHS----GYV 195 (315)
T ss_pred cCCCcceeeeeeecccEEEE-EecCCCcCcEEEEEEcCCCCCcE-EEEccCCceEEEEccCCcchhhcccccc----ccE
Confidence 46789999999998655422 22222255677799999852222 6999999999999999999889999998 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+++||||...++|+.||.+.+||
T Consensus 196 ~t~~vSpDGslcasGgkdg~~~Lwd 220 (315)
T KOG0279|consen 196 NTVTVSPDGSLCASGGKDGEAMLWD 220 (315)
T ss_pred EEEEECCCCCEEecCCCCceEEEEE
Confidence 9999999999999999999999997
No 13
>PTZ00421 coronin; Provisional
Probab=99.78 E-value=3.7e-18 Score=108.67 Aligned_cols=98 Identities=13% Similarity=0.217 Sum_probs=79.7
Q ss_pred cCCCceEEEEeCccCceee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 3 KVPSSVIYIWTLLELQTYA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
...|++|++||+.++.... ......|...+..+.|+|..... +++++.|+.|++||+++++.+..+..|.
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~i--LaSgs~DgtVrIWDl~tg~~~~~l~~h~--- 168 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNV--LASAGADMVVNVWDVERGKAVEVIKCHS--- 168 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCE--EEEEeCCCEEEEEECCCCeEEEEEcCCC---
Confidence 4679999999998653210 11223355567779999976433 7999999999999999998888888888
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 169 -~~V~sla~spdG~lLatgs~Dg~IrIwD 196 (493)
T PTZ00421 169 -DQITSLEWNLDGSLLCTTSKDKKLNIID 196 (493)
T ss_pred -CceEEEEEECCCCEEEEecCCCEEEEEE
Confidence 8999999999999999999999999997
No 14
>KOG0273|consensus
Probab=99.77 E-value=3e-18 Score=105.59 Aligned_cols=99 Identities=19% Similarity=0.439 Sum_probs=85.3
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC------ceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI------SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
+++.|++++||.+..... ...++.|...+.++.|+|.+.. +..+++++.|++|++||+..+.++..+..|.
T Consensus 376 S~SdD~TlkiWs~~~~~~--~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~- 452 (524)
T KOG0273|consen 376 SCSDDGTLKIWSMGQSNS--VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ- 452 (524)
T ss_pred EecCCCeeEeeecCCCcc--hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC-
Confidence 578999999999988777 4444446767888888886542 2347999999999999999999999998898
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|+++++++|+.|+.|.+|+
T Consensus 453 ---~pVysvafS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 453 ---EPVYSVAFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred ---CceEEEEecCCCcEEEecCCCCeeEecc
Confidence 8999999999999999999999999995
No 15
>KOG0276|consensus
Probab=99.77 E-value=3.1e-18 Score=108.77 Aligned_cols=97 Identities=20% Similarity=0.401 Sum_probs=85.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..=|++|++|.+....+ .+..+.|..+++++.|.+-+... +++||+.|.++++||.++.+|++++.+|. ..|.
T Consensus 159 ~sLDrTVKVWslgs~~~--nfTl~gHekGVN~Vdyy~~gdkp-ylIsgaDD~tiKvWDyQtk~CV~TLeGHt----~Nvs 231 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPHP--NFTLEGHEKGVNCVDYYTGGDKP-YLISGADDLTIKVWDYQTKSCVQTLEGHT----NNVS 231 (794)
T ss_pred eeccccEEEEEcCCCCC--ceeeeccccCcceEEeccCCCcc-eEEecCCCceEEEeecchHHHHHHhhccc----ccce
Confidence 34589999999988887 56666678889999998876443 26999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.|+|.-++++||+.||+++||.
T Consensus 232 ~v~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 232 FVFFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred EEEecCCCcEEEEecCCccEEEec
Confidence 999999999999999999999994
No 16
>KOG0279|consensus
Probab=99.76 E-value=1.1e-17 Score=97.66 Aligned_cols=97 Identities=22% Similarity=0.263 Sum_probs=79.1
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|+++++||+.+++...++.. |...+.+++++++... +++|+.|.++++|+.... +..++..... ++-|
T Consensus 80 S~swD~~lrlWDl~~g~~t~~f~G--H~~dVlsva~s~dn~q---ivSGSrDkTiklwnt~g~-ck~t~~~~~~--~~WV 151 (315)
T KOG0279|consen 80 SASWDGTLRLWDLATGESTRRFVG--HTKDVLSVAFSTDNRQ---IVSGSRDKTIKLWNTLGV-CKYTIHEDSH--REWV 151 (315)
T ss_pred eccccceEEEEEecCCcEEEEEEe--cCCceEEEEecCCCce---eecCCCcceeeeeeeccc-EEEEEecCCC--cCcE
Confidence 346799999999999988666666 4666888999999888 899999999999999644 4444433321 1789
Q ss_pred EEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
.|+.|+|+ ..+|++++.|+++++||
T Consensus 152 scvrfsP~~~~p~Ivs~s~DktvKvWn 178 (315)
T KOG0279|consen 152 SCVRFSPNESNPIIVSASWDKTVKVWN 178 (315)
T ss_pred EEEEEcCCCCCcEEEEccCCceEEEEc
Confidence 99999997 77899999999999997
No 17
>KOG0295|consensus
Probab=99.76 E-value=8.3e-18 Score=100.98 Aligned_cols=95 Identities=19% Similarity=0.342 Sum_probs=86.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.++.++..+.. |...+..++|+|.+.+ ++++..|+++++||+++++|++.+++|+ ..+.
T Consensus 310 ~SrDktIk~wdv~tg~cL~tL~g--hdnwVr~~af~p~Gky---i~ScaDDktlrvwdl~~~~cmk~~~ah~----hfvt 380 (406)
T KOG0295|consen 310 GSRDKTIKIWDVSTGMCLFTLVG--HDNWVRGVAFSPGGKY---ILSCADDKTLRVWDLKNLQCMKTLEAHE----HFVT 380 (406)
T ss_pred ecccceEEEEeccCCeEEEEEec--ccceeeeeEEcCCCeE---EEEEecCCcEEEEEeccceeeeccCCCc----ceeE
Confidence 46899999999999999666555 5667788999999888 8999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+.+..++++|+.|.++++|.
T Consensus 381 ~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 381 SLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred EEecCCCCceEEeccccceeeeee
Confidence 999999999999999999999984
No 18
>KOG0286|consensus
Probab=99.75 E-value=1.7e-17 Score=97.41 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=86.1
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|++.++||++.+.+...|.. |...++.+.|.|.+.. +++|+.|+++++||++..+.+..+...... .+|
T Consensus 204 Sg~cD~~aklWD~R~~~c~qtF~g--hesDINsv~ffP~G~a---fatGSDD~tcRlyDlRaD~~~a~ys~~~~~--~gi 276 (343)
T KOG0286|consen 204 SGGCDKSAKLWDVRSGQCVQTFEG--HESDINSVRFFPSGDA---FATGSDDATCRLYDLRADQELAVYSHDSII--CGI 276 (343)
T ss_pred ecccccceeeeeccCcceeEeecc--cccccceEEEccCCCe---eeecCCCceeEEEeecCCcEEeeeccCccc--CCc
Confidence 456799999999999999666666 5778999999999998 899999999999999999888887744432 689
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++++||..|++|++|..|.++.+||
T Consensus 277 tSv~FS~SGRlLfagy~d~~c~vWD 301 (343)
T KOG0286|consen 277 TSVAFSKSGRLLFAGYDDFTCNVWD 301 (343)
T ss_pred eeEEEcccccEEEeeecCCceeEee
Confidence 9999999999999999999999997
No 19
>KOG0319|consensus
Probab=99.75 E-value=1.3e-17 Score=107.10 Aligned_cols=97 Identities=18% Similarity=0.333 Sum_probs=89.6
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
||+++|++|+||.+.++.++.++.. |.+.+..+.|...+.. +++++.||.+++|+++++.|+.++.+|. +.
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eG--H~~aVlra~F~~~~~q---liS~~adGliKlWnikt~eC~~tlD~H~----Dr 591 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEG--HTSAVLRASFIRNGKQ---LISAGADGLIKLWNIKTNECEMTLDAHN----DR 591 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecC--ccceeEeeeeeeCCcE---EEeccCCCcEEEEeccchhhhhhhhhcc----ce
Confidence 5789999999999999999888877 4566777999999988 8999999999999999999999999999 99
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|++++-+|....+++|+.|+.+.+|.
T Consensus 592 vWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 592 VWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred eEEEeecCccceeEecCCCeEEEEee
Confidence 99999999999999999999999984
No 20
>KOG0271|consensus
Probab=99.75 E-value=7.5e-18 Score=102.02 Aligned_cols=93 Identities=15% Similarity=0.268 Sum_probs=84.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
=|..|++||.++|+.+..+.. |-..+..+.|+.++.. +++|+.|.++++|++++.+....+++|. +.|+++
T Consensus 387 FDkSVkLW~g~tGk~lasfRG--Hv~~VYqvawsaDsRL---lVS~SkDsTLKvw~V~tkKl~~DLpGh~----DEVf~v 457 (480)
T KOG0271|consen 387 FDKSVKLWDGRTGKFLASFRG--HVAAVYQVAWSADSRL---LVSGSKDSTLKVWDVRTKKLKQDLPGHA----DEVFAV 457 (480)
T ss_pred cccceeeeeCCCcchhhhhhh--ccceeEEEEeccCccE---EEEcCCCceEEEEEeeeeeecccCCCCC----ceEEEE
Confidence 478999999999998666665 3455677999998888 8999999999999999999999999999 999999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|+|||..+++|+.|..+++|.
T Consensus 458 DwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 458 DWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EecCCCceeecCCCceEEEeec
Confidence 9999999999999999999994
No 21
>KOG0316|consensus
Probab=99.74 E-value=1.3e-17 Score=95.71 Aligned_cols=97 Identities=12% Similarity=0.206 Sum_probs=84.5
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
+++.+|.+|++||...+.++..+..+.+ ++..+.-..+... +++|+.|+.+.+||+.+|+.++.+.+|. ..
T Consensus 33 ltcGsdrtvrLWNp~rg~liktYsghG~--EVlD~~~s~Dnsk---f~s~GgDk~v~vwDV~TGkv~Rr~rgH~----aq 103 (307)
T KOG0316|consen 33 LTCGSDRTVRLWNPLRGALIKTYSGHGH--EVLDAALSSDNSK---FASCGGDKAVQVWDVNTGKVDRRFRGHL----AQ 103 (307)
T ss_pred EEcCCCceEEeecccccceeeeecCCCc--eeeeccccccccc---cccCCCCceEEEEEcccCeeeeeccccc----ce
Confidence 3678999999999999999888887432 3444444455555 7999999999999999999999999999 99
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|+.++|+.+...++||+-|.++++||
T Consensus 104 VNtV~fNeesSVv~SgsfD~s~r~wD 129 (307)
T KOG0316|consen 104 VNTVRFNEESSVVASGSFDSSVRLWD 129 (307)
T ss_pred eeEEEecCcceEEEeccccceeEEEE
Confidence 99999999999999999999999997
No 22
>KOG0275|consensus
Probab=99.74 E-value=5.4e-18 Score=101.34 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=88.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..-||.|++|.+.+|.++.++... |..++.++.|+.++.. +++++.|.++++--+++|++++.+.+|. ..|+
T Consensus 281 GsqDGkIKvWri~tG~ClRrFdrA-HtkGvt~l~FSrD~Sq---iLS~sfD~tvRiHGlKSGK~LKEfrGHs----Syvn 352 (508)
T KOG0275|consen 281 GSQDGKIKVWRIETGQCLRRFDRA-HTKGVTCLSFSRDNSQ---ILSASFDQTVRIHGLKSGKCLKEFRGHS----SYVN 352 (508)
T ss_pred cCcCCcEEEEEEecchHHHHhhhh-hccCeeEEEEccCcch---hhcccccceEEEeccccchhHHHhcCcc----cccc
Confidence 456999999999999999998875 3456888999999888 8999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...|.++|..+++++.||+|++|+
T Consensus 353 ~a~ft~dG~~iisaSsDgtvkvW~ 376 (508)
T KOG0275|consen 353 EATFTDDGHHIISASSDGTVKVWH 376 (508)
T ss_pred ceEEcCCCCeEEEecCCccEEEec
Confidence 999999999999999999999996
No 23
>KOG0295|consensus
Probab=99.74 E-value=3.1e-17 Score=98.57 Aligned_cols=99 Identities=18% Similarity=0.296 Sum_probs=81.0
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC------------CceEEEeeCCCCcEEEeeCCCccchhe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN------------ISLFDSRPGHDCSIRLWNLDNKTCVQE 69 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~s~~~d~~v~iwd~~~~~~~~~ 69 (106)
++.+|.+|++|-+.++++...+.. |.-.+.++.|-|... .+.++++++.|++|++||+.++.++-+
T Consensus 252 s~s~dqtl~vW~~~t~~~k~~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~t 329 (406)
T KOG0295|consen 252 SCSNDQTLRVWVVATKQCKAELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFT 329 (406)
T ss_pred ecCCCceEEEEEeccchhhhhhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEE
Confidence 367899999999999977333333 332345566655422 234689999999999999999999999
Q ss_pred eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+|. ..|..++|+|.|++|+|+..|+++++||
T Consensus 330 L~ghd----nwVr~~af~p~Gkyi~ScaDDktlrvwd 362 (406)
T KOG0295|consen 330 LVGHD----NWVRGVAFSPGGKYILSCADDKTLRVWD 362 (406)
T ss_pred Eeccc----ceeeeeEEcCCCeEEEEEecCCcEEEEE
Confidence 99999 8999999999999999999999999997
No 24
>KOG0269|consensus
Probab=99.72 E-value=3.6e-17 Score=105.63 Aligned_cols=97 Identities=18% Similarity=0.375 Sum_probs=82.9
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~ 80 (106)
+.+.||+|++||++..+....+... ...+..+.|+|..... ++++...|.+++||++.. ++..++.+|. +.
T Consensus 151 SGSQDg~vK~~DlR~~~S~~t~~~n--SESiRDV~fsp~~~~~--F~s~~dsG~lqlWDlRqp~r~~~k~~AH~----Gp 222 (839)
T KOG0269|consen 151 SGSQDGTVKCWDLRSKKSKSTFRSN--SESIRDVKFSPGYGNK--FASIHDSGYLQLWDLRQPDRCEKKLTAHN----GP 222 (839)
T ss_pred ecCCCceEEEEeeeccccccccccc--chhhhceeeccCCCce--EEEecCCceEEEeeccCchhHHHHhhccc----Cc
Confidence 4578999999999988875555552 2346679999987665 799999999999999974 6788999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.|+.|+|++.+||+||+|+.|+|||
T Consensus 223 V~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 223 VLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred eEEEeecCCCceeeecCCCccEEEEe
Confidence 99999999999999999999999997
No 25
>KOG0277|consensus
Probab=99.71 E-value=1.8e-17 Score=95.90 Aligned_cols=96 Identities=21% Similarity=0.301 Sum_probs=81.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v 81 (106)
.+.|+++++||++.... ....+.|+.++.+|.|+...... ++||+.|+.|++||+++ ..++..+.+|. -.|
T Consensus 166 ~Sgd~~l~lwdvr~~gk--~~~i~ah~~Eil~cdw~ky~~~v--l~Tg~vd~~vr~wDir~~r~pl~eL~gh~----~AV 237 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGK--FMSIEAHNSEILCCDWSKYNHNV--LATGGVDNLVRGWDIRNLRTPLFELNGHG----LAV 237 (311)
T ss_pred ccCCceEEEEEecCCCc--eeEEEeccceeEeecccccCCcE--EEecCCCceEEEEehhhccccceeecCCc----eEE
Confidence 46899999999986543 33355567789999999998886 89999999999999997 46788899998 899
Q ss_pred EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..++||| ....|+|++.|-+++|||
T Consensus 238 Rkvk~Sph~~~lLaSasYDmT~riw~ 263 (311)
T KOG0277|consen 238 RKVKFSPHHASLLASASYDMTVRIWD 263 (311)
T ss_pred EEEecCcchhhHhhhccccceEEecc
Confidence 9999999 455799999999999997
No 26
>KOG0266|consensus
Probab=99.71 E-value=9e-17 Score=101.91 Aligned_cols=94 Identities=19% Similarity=0.389 Sum_probs=81.3
Q ss_pred CCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC-CCccchheeccccccCCCC
Q psy17135 4 VPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL-DNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~-~~~~~~~~~~~~~~~~~~~ 80 (106)
..|+.+++|++.+.+ .+... ..|...+..+.|.|.+.. +++++.|+++++||+ ..+.+++.+.+|. ..
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~l--~~h~~~v~~~~fs~d~~~---l~s~s~D~tiriwd~~~~~~~~~~l~gH~----~~ 248 (456)
T KOG0266|consen 178 SSDGLIRIWKLEGIKSNLLREL--SGHTRGVSDVAFSPDGSY---LLSGSDDKTLRIWDLKDDGRNLKTLKGHS----TY 248 (456)
T ss_pred cCCCcEEEeecccccchhhccc--cccccceeeeEECCCCcE---EEEecCCceEEEeeccCCCeEEEEecCCC----Cc
Confidence 468999999997766 32222 446667888999999997 899999999999999 4568899999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|++++|+|+++.+++|+.|++|++||
T Consensus 249 v~~~~f~p~g~~i~Sgs~D~tvriWd 274 (456)
T KOG0266|consen 249 VTSVAFSPDGNLLVSGSDDGTVRIWD 274 (456)
T ss_pred eEEEEecCCCCEEEEecCCCcEEEEe
Confidence 99999999999999999999999997
No 27
>KOG0293|consensus
Probab=99.71 E-value=1.2e-17 Score=101.95 Aligned_cols=97 Identities=15% Similarity=0.221 Sum_probs=75.2
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..+..|++||++..+.+.++.++.....+....|--.. ..|+++|++|+.|+||+..+|+++..+.+|. ..|++
T Consensus 414 L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~--~~fiaSGSED~kvyIWhr~sgkll~~LsGHs----~~vNc 487 (519)
T KOG0293|consen 414 LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN--DKFIASGSEDSKVYIWHRISGKLLAVLSGHS----KTVNC 487 (519)
T ss_pred cccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC--cceEEecCCCceEEEEEccCCceeEeecCCc----ceeeE
Confidence 45778999999987776666664322212222232222 2448999999999999999999999999999 89999
Q ss_pred EEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
++|+| +-..+||++.||+|+||-
T Consensus 488 VswNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 488 VSWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred EecCCCCHHHhhccCCCCeEEEec
Confidence 99999 445699999999999993
No 28
>KOG0296|consensus
Probab=99.71 E-value=9.3e-17 Score=96.52 Aligned_cols=91 Identities=21% Similarity=0.297 Sum_probs=82.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
=||+|.|||+...+. +..+++.. .+..+.|.+ ..+ +++++.+|.|+.||.++|+++..+.+|. ..|.++
T Consensus 306 vdG~i~iyD~a~~~~--R~~c~he~-~V~~l~w~~-t~~---l~t~c~~g~v~~wDaRtG~l~~~y~GH~----~~Il~f 374 (399)
T KOG0296|consen 306 VDGTIAIYDLAASTL--RHICEHED-GVTKLKWLN-TDY---LLTACANGKVRQWDARTGQLKFTYTGHQ----MGILDF 374 (399)
T ss_pred ccceEEEEecccchh--heeccCCC-ceEEEEEcC-cch---heeeccCceEEeeeccccceEEEEecCc----hheeEE
Confidence 489999999999888 77777544 477899999 667 7999999999999999999999999999 899999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+.+.++++|.|++.++|+
T Consensus 375 ~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 375 ALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred EEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999985
No 29
>KOG0277|consensus
Probab=99.71 E-value=3.1e-17 Score=94.90 Aligned_cols=98 Identities=19% Similarity=0.258 Sum_probs=81.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...||+++|||+..... .....++|..++.++.|++..... +++++.|++||+|+..-.+.+.++.+|. ..|
T Consensus 78 ~a~GDGSLrl~d~~~~s~-Pi~~~kEH~~EV~Svdwn~~~r~~--~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~----~~I 150 (311)
T KOG0277|consen 78 AASGDGSLRLFDLTMPSK-PIHKFKEHKREVYSVDWNTVRRRI--FLTSSWDGTIKLWDPNRPNSVQTFNGHN----SCI 150 (311)
T ss_pred EEecCceEEEeccCCCCc-chhHHHhhhhheEEecccccccee--EEeeccCCceEeecCCCCcceEeecCCc----cEE
Confidence 467899999999653322 223344566778889999987776 6788999999999999899999999998 899
Q ss_pred EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
....|+| ....+++++.|++.++||
T Consensus 151 y~a~~sp~~~nlfas~Sgd~~l~lwd 176 (311)
T KOG0277|consen 151 YQAAFSPHIPNLFASASGDGTLRLWD 176 (311)
T ss_pred EEEecCCCCCCeEEEccCCceEEEEE
Confidence 9999999 677899999999999997
No 30
>KOG0291|consensus
Probab=99.71 E-value=1.2e-16 Score=103.33 Aligned_cols=94 Identities=14% Similarity=0.268 Sum_probs=85.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..-|++.+|+.++-.- .++.+.|.....++.++|+++. ++||++|+.|++||...+.|..++..|. ..|+.
T Consensus 327 ~klgQLlVweWqsEsY--VlKQQgH~~~i~~l~YSpDgq~---iaTG~eDgKVKvWn~~SgfC~vTFteHt----s~Vt~ 397 (893)
T KOG0291|consen 327 SKLGQLLVWEWQSESY--VLKQQGHSDRITSLAYSPDGQL---IATGAEDGKVKVWNTQSGFCFVTFTEHT----SGVTA 397 (893)
T ss_pred CccceEEEEEeeccce--eeeccccccceeeEEECCCCcE---EEeccCCCcEEEEeccCceEEEEeccCC----CceEE
Confidence 3457899999987665 6666667778899999999998 8999999999999999999999999999 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|+..++.++++|-||+|+.||
T Consensus 398 v~f~~~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 398 VQFTARGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred EEEEecCCEEEEeecCCeEEeee
Confidence 99999999999999999999997
No 31
>KOG0291|consensus
Probab=99.71 E-value=7.4e-17 Score=104.24 Aligned_cols=96 Identities=16% Similarity=0.329 Sum_probs=82.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
..=||+|+.||++.++....+..+... ...+++..|.+.. ++.|+.|.. |++|++++|+.+-.+.+|+ +.|
T Consensus 410 sSLDGtVRAwDlkRYrNfRTft~P~p~-QfscvavD~sGel---V~AG~~d~F~IfvWS~qTGqllDiLsGHE----gPV 481 (893)
T KOG0291|consen 410 SSLDGTVRAWDLKRYRNFRTFTSPEPI-QFSCVAVDPSGEL---VCAGAQDSFEIFVWSVQTGQLLDILSGHE----GPV 481 (893)
T ss_pred eecCCeEEeeeecccceeeeecCCCce-eeeEEEEcCCCCE---EEeeccceEEEEEEEeecCeeeehhcCCC----Ccc
Confidence 345999999999999999999887544 3555666666665 677777754 8999999999999999999 999
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++|+|++..|+|++.|.+|++||
T Consensus 482 s~l~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 482 SGLSFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred eeeEEccccCeEEeccccceEEEEE
Confidence 9999999999999999999999996
No 32
>KOG0292|consensus
Probab=99.71 E-value=5.6e-17 Score=106.51 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=86.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|-+|++|+.++.+++.++.. |-+.+.++.|++.-+. ++++|.|.+|+||++.+++++..+.+|. ..|.
T Consensus 69 GGDDykIkVWnYk~rrclftL~G--HlDYVRt~~FHheyPW---IlSASDDQTIrIWNwqsr~~iavltGHn----HYVM 139 (1202)
T KOG0292|consen 69 GGDDYKIKVWNYKTRRCLFTLLG--HLDYVRTVFFHHEYPW---ILSASDDQTIRIWNWQSRKCIAVLTGHN----HYVM 139 (1202)
T ss_pred cCCccEEEEEecccceehhhhcc--ccceeEEeeccCCCce---EEEccCCCeEEEEeccCCceEEEEecCc----eEEE
Confidence 46788999999999999555444 6777888999998888 8999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|..|+|....++|+|-|.+||+||
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWD 163 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWD 163 (1202)
T ss_pred eeccCCccceEEEecccceEEEEe
Confidence 999999999999999999999998
No 33
>PTZ00420 coronin; Provisional
Probab=99.69 E-value=3e-16 Score=101.11 Aligned_cols=98 Identities=8% Similarity=0.156 Sum_probs=76.3
Q ss_pred CcCCCceEEEEeCccCce-ee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 2 QKVPSSVIYIWTLLELQT-YA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
+...|++|++||+.++.. .. ......|...+..+.|+|.+... +++++.|+.|++||+++++....+. +.
T Consensus 92 SgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~i--LaSgS~DgtIrIWDl~tg~~~~~i~-~~- 167 (568)
T PTZ00420 92 SGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYI--MCSSGFDSFVNIWDIENEKRAFQIN-MP- 167 (568)
T ss_pred EEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeE--EEEEeCCCeEEEEECCCCcEEEEEe-cC-
Confidence 346799999999986432 11 11122345567779999987653 5799999999999999988766664 44
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+++|+|++..+++++.|+.+++||
T Consensus 168 ---~~V~SlswspdG~lLat~s~D~~IrIwD 195 (568)
T PTZ00420 168 ---KKLSSLKWNIKGNLLSGTCVGKHMHIID 195 (568)
T ss_pred ---CcEEEEEECCCCCEEEEEecCCEEEEEE
Confidence 6899999999999999999999999997
No 34
>KOG0282|consensus
Probab=99.69 E-value=1.5e-16 Score=98.33 Aligned_cols=96 Identities=21% Similarity=0.295 Sum_probs=85.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+..-|..|++||+.+|+++.++.. .....++.+.|.+... +++|+.|+.|+.||+++++.++.+..|. ..|
T Consensus 275 S~sfD~~lKlwDtETG~~~~~f~~---~~~~~cvkf~pd~~n~--fl~G~sd~ki~~wDiRs~kvvqeYd~hL----g~i 345 (503)
T KOG0282|consen 275 SASFDRFLKLWDTETGQVLSRFHL---DKVPTCVKFHPDNQNI--FLVGGSDKKIRQWDIRSGKVVQEYDRHL----GAI 345 (503)
T ss_pred eeecceeeeeeccccceEEEEEec---CCCceeeecCCCCCcE--EEEecCCCcEEEEeccchHHHHHHHhhh----hhe
Confidence 346689999999999999888877 4456778999998444 7899999999999999999999999888 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.|-++++.+++++.|+.+++|+
T Consensus 346 ~~i~F~~~g~rFissSDdks~riWe 370 (503)
T KOG0282|consen 346 LDITFVDEGRRFISSSDDKSVRIWE 370 (503)
T ss_pred eeeEEccCCceEeeeccCccEEEEE
Confidence 9999999999999999999999996
No 35
>KOG0645|consensus
Probab=99.68 E-value=7.2e-16 Score=89.87 Aligned_cols=97 Identities=14% Similarity=0.258 Sum_probs=80.3
Q ss_pred CcCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheecccccc
Q psy17135 2 QKVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKK 76 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~ 76 (106)
++..|..|++|++..+. +...+.- .|...+..++|.|.+++ |++++.|.++.||.-..+ +++..+.+|+
T Consensus 32 scg~Dk~vriw~~~~~~s~~ck~vld~-~hkrsVRsvAwsp~g~~---La~aSFD~t~~Iw~k~~~efecv~~lEGHE-- 105 (312)
T KOG0645|consen 32 SCGTDKAVRIWSTSSGDSWTCKTVLDD-GHKRSVRSVAWSPHGRY---LASASFDATVVIWKKEDGEFECVATLEGHE-- 105 (312)
T ss_pred eecCCceEEEEecCCCCcEEEEEeccc-cchheeeeeeecCCCcE---EEEeeccceEEEeecCCCceeEEeeeeccc--
Confidence 46789999999998533 3112222 34556788999999998 999999999999976654 5788999999
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|-+++|+++|.+||+|++|..|-+|.
T Consensus 106 --nEVK~Vaws~sG~~LATCSRDKSVWiWe 133 (312)
T KOG0645|consen 106 --NEVKCVAWSASGNYLATCSRDKSVWIWE 133 (312)
T ss_pred --cceeEEEEcCCCCEEEEeeCCCeEEEEE
Confidence 8999999999999999999999999984
No 36
>KOG0278|consensus
Probab=99.68 E-value=4.2e-16 Score=90.35 Aligned_cols=97 Identities=12% Similarity=0.201 Sum_probs=74.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCC-------------------------------------CCCCCeeEeeeCCCCce
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPEL-------------------------------------NSEPPACQTIPSSNISL 45 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~ 45 (106)
+..|++||+||.+++..+..+....+ ...+.+.+..|....
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~-- 238 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEF-- 238 (334)
T ss_pred eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCce--
Confidence 46788899999888877776654330 011222333444433
Q ss_pred EEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 46 FDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 46 ~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|++|..++.||..++..+..+ .+|. +.|.|+.|+|+|...++|+.||+|++|.
T Consensus 239 -fVaGged~~~~kfDy~TgeEi~~~nkgh~----gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 239 -FVAGGEDFKVYKFDYNTGEEIGSYNKGHF----GPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred -EEecCcceEEEEEeccCCceeeecccCCC----CceEEEEECCCCceeeccCCCceEEEEE
Confidence 699999999999999999877775 7777 8999999999999999999999999993
No 37
>KOG0315|consensus
Probab=99.68 E-value=4.6e-16 Score=89.97 Aligned_cols=94 Identities=14% Similarity=0.247 Sum_probs=77.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
....||+||++++.+......+.|+..+..+.|...+.. ++||++||+++|||++...+-+.+. +. ..|+++
T Consensus 59 ~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrW---MyTgseDgt~kIWdlR~~~~qR~~~-~~----spVn~v 130 (311)
T KOG0315|consen 59 GNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRW---MYTGSEDGTVKIWDLRSLSCQRNYQ-HN----SPVNTV 130 (311)
T ss_pred cCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeE---EEecCCCceEEEEeccCcccchhcc-CC----CCcceE
Confidence 346799999998877555555556666777888888877 8999999999999999866555554 55 799999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+|+...|++|..+|.|++||
T Consensus 131 vlhpnQteLis~dqsg~irvWD 152 (311)
T KOG0315|consen 131 VLHPNQTELISGDQSGNIRVWD 152 (311)
T ss_pred EecCCcceEEeecCCCcEEEEE
Confidence 9999999999999999999997
No 38
>KOG0315|consensus
Probab=99.68 E-value=3.3e-16 Score=90.57 Aligned_cols=94 Identities=17% Similarity=0.288 Sum_probs=80.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~ 80 (106)
-..|.+||+|.+.+|.+ ....++..+.+..+...|.... |++++. ..||+||+++++ ++.++.+|. ..
T Consensus 16 A~YDhTIRfWqa~tG~C--~rTiqh~dsqVNrLeiTpdk~~---LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~----kN 85 (311)
T KOG0315|consen 16 AGYDHTIRFWQALTGIC--SRTIQHPDSQVNRLEITPDKKD---LAAAGN-QHVRLYDLNSNNPNPVATFEGHT----KN 85 (311)
T ss_pred ccCcceeeeeehhcCeE--EEEEecCccceeeEEEcCCcch---hhhccC-CeeEEEEccCCCCCceeEEeccC----Cc
Confidence 46789999999999999 5555555667888888888887 666664 679999999865 588899998 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.++.|..+|+++.+|++||+++|||
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWd 111 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWD 111 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEe
Confidence 99999999999999999999999997
No 39
>KOG0292|consensus
Probab=99.68 E-value=1.2e-16 Score=105.05 Aligned_cols=96 Identities=23% Similarity=0.400 Sum_probs=87.7
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
++.-+|.|++||.+-+.++.++.- |.+.+..+.|+|..+. +++|+.|..|++|+.++.+|+.++.+|- +.|
T Consensus 26 tslHsG~IQlWDYRM~tli~rFde--HdGpVRgv~FH~~qpl---FVSGGDDykIkVWnYk~rrclftL~GHl----DYV 96 (1202)
T KOG0292|consen 26 TSLHSGVIQLWDYRMGTLIDRFDE--HDGPVRGVDFHPTQPL---FVSGGDDYKIKVWNYKTRRCLFTLLGHL----DYV 96 (1202)
T ss_pred EeecCceeeeehhhhhhHHhhhhc--cCCccceeeecCCCCe---EEecCCccEEEEEecccceehhhhcccc----cee
Confidence 345689999999999999777776 4666778999999988 8999999999999999999999999999 999
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.|++..++++|+|.|.+|+||.
T Consensus 97 Rt~~FHheyPWIlSASDDQTIrIWN 121 (1202)
T KOG0292|consen 97 RTVFFHHEYPWILSASDDQTIRIWN 121 (1202)
T ss_pred EEeeccCCCceEEEccCCCeEEEEe
Confidence 9999999999999999999999995
No 40
>KOG0285|consensus
Probab=99.67 E-value=2.1e-16 Score=95.28 Aligned_cols=95 Identities=16% Similarity=0.318 Sum_probs=83.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|+.||+...+.+..+.. |-+.+.++..+|.-.. +++|+.|.++++||+++...+..+.+|. ..|.
T Consensus 211 ~gedk~VKCwDLe~nkvIR~YhG--HlS~V~~L~lhPTldv---l~t~grDst~RvWDiRtr~~V~~l~GH~----~~V~ 281 (460)
T KOG0285|consen 211 AGEDKQVKCWDLEYNKVIRHYHG--HLSGVYCLDLHPTLDV---LVTGGRDSTIRVWDIRTRASVHVLSGHT----NPVA 281 (460)
T ss_pred ecCCCeeEEEechhhhhHHHhcc--ccceeEEEecccccee---EEecCCcceEEEeeecccceEEEecCCC----Ccce
Confidence 46799999999998887666655 3456777888887766 8999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+.|-...+++|+-|++|++||
T Consensus 282 ~V~~~~~dpqvit~S~D~tvrlWD 305 (460)
T KOG0285|consen 282 SVMCQPTDPQVITGSHDSTVRLWD 305 (460)
T ss_pred eEEeecCCCceEEecCCceEEEee
Confidence 999999888999999999999998
No 41
>KOG0647|consensus
Probab=99.67 E-value=7.4e-16 Score=90.96 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=77.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+=|++||+|+++............+...+.++.|+.++.. +++|+.|+.+++||+.+++ ..++..|. ..|.
T Consensus 46 ~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddgsk---Vf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd----~pvk 117 (347)
T KOG0647|consen 46 GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSK---VFSGGCDKQAKLWDLASGQ-VSQVAAHD----APVK 117 (347)
T ss_pred cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCce---EEeeccCCceEEEEccCCC-eeeeeecc----ccee
Confidence 34589999999987433333444445666777999999987 8999999999999999985 66777888 8999
Q ss_pred EEEEcCCCC--EEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKP--FIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~--~~~s~~~d~~i~iwd 106 (106)
.+.|-+... .|++||.|.+++.||
T Consensus 118 t~~wv~~~~~~cl~TGSWDKTlKfWD 143 (347)
T KOG0647|consen 118 TCHWVPGMNYQCLVTGSWDKTLKFWD 143 (347)
T ss_pred EEEEecCCCcceeEecccccceeecc
Confidence 999876444 699999999999998
No 42
>KOG0772|consensus
Probab=99.67 E-value=2.7e-16 Score=98.33 Aligned_cols=101 Identities=18% Similarity=0.252 Sum_probs=75.3
Q ss_pred CCcCCCceEEEEeCccCce-eeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--ch-heeccc
Q psy17135 1 MQKVPSSVIYIWTLLELQT-YARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CV-QEITAH 73 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~-~~~~~~ 73 (106)
|++..||+++|||+...+. +..+.. ......+.+|.|++.+.. +++|+.||.|++|+..... +. ..-.+|
T Consensus 285 lT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~---iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH 361 (641)
T KOG0772|consen 285 LTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKL---IAAGCLDGSIQIWDKGSRTVRPVMKVKDAH 361 (641)
T ss_pred EEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcch---hhhcccCCceeeeecCCcccccceEeeecc
Confidence 6789999999999976332 122221 112234566999999999 8999999999999975432 22 222455
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
... ..|+++.||++|++|+|-+.|.++++||
T Consensus 362 ~~g--~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 362 LPG--QDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CCC--CceeEEEeccccchhhhccCCCceeeee
Confidence 521 4899999999999999999999999997
No 43
>KOG0319|consensus
Probab=99.67 E-value=6.3e-16 Score=99.55 Aligned_cols=96 Identities=19% Similarity=0.337 Sum_probs=86.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
|.+-|.+.+||++..++.+..+.. |..++-++.|.|.++. ++|+|.|++|+||.+.+..|++++.+|. ..|
T Consensus 480 T~SqDktaKiW~le~~~l~~vLsG--H~RGvw~V~Fs~~dq~---laT~SgD~TvKIW~is~fSClkT~eGH~----~aV 550 (775)
T KOG0319|consen 480 TGSQDKTAKIWDLEQLRLLGVLSG--HTRGVWCVSFSKNDQL---LATCSGDKTVKIWSISTFSCLKTFEGHT----SAV 550 (775)
T ss_pred ecccccceeeecccCceEEEEeeC--CccceEEEEeccccce---eEeccCCceEEEEEeccceeeeeecCcc----cee
Confidence 457799999999997777666655 5667788999999998 8999999999999999999999999999 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.|--++..++||+.||.+++|+
T Consensus 551 lra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 551 LRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred EeeeeeeCCcEEEeccCCCcEEEEe
Confidence 9999999999999999999999995
No 44
>KOG4283|consensus
Probab=99.66 E-value=1.2e-15 Score=90.21 Aligned_cols=98 Identities=17% Similarity=0.316 Sum_probs=83.2
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+++=|.++++||..+.+....+..+ ..+..-.++|......++++|..+-.|++.|+..|.+...+.+|. +.|
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~me---~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr----~~v 191 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFKME---GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHR----DGV 191 (397)
T ss_pred cccccceEEEeecccceeeEEeecC---ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecccc----Cce
Confidence 3556899999999999987777774 335555677776655557999999999999999999999999999 899
Q ss_pred EEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
.++.|+|...+ |++|+.||.+++||
T Consensus 192 laV~Wsp~~e~vLatgsaDg~irlWD 217 (397)
T KOG4283|consen 192 LAVEWSPSSEWVLATGSADGAIRLWD 217 (397)
T ss_pred EEEEeccCceeEEEecCCCceEEEEE
Confidence 99999996665 89999999999997
No 45
>KOG0318|consensus
Probab=99.66 E-value=1.5e-15 Score=95.10 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=85.0
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---cccccC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHRKKF 77 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~ 77 (106)
|+...|++|.+|+=-..+- .....+|..-+.++.|+|++.. +++++.|+++.+||-.+|..+..+. +|.
T Consensus 164 ~T~sdDn~v~ffeGPPFKF--k~s~r~HskFV~~VRysPDG~~---Fat~gsDgki~iyDGktge~vg~l~~~~aHk--- 235 (603)
T KOG0318|consen 164 ATGSDDNTVAFFEGPPFKF--KSSFREHSKFVNCVRYSPDGSR---FATAGSDGKIYIYDGKTGEKVGELEDSDAHK--- 235 (603)
T ss_pred EeccCCCeEEEeeCCCeee--eecccccccceeeEEECCCCCe---EEEecCCccEEEEcCCCccEEEEecCCCCcc---
Confidence 5778999999999777665 5555556666788999999888 8999999999999999999888887 566
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|++++|+||+..+++++.|.++++||
T Consensus 236 -GsIfalsWsPDs~~~~T~SaDkt~KIWd 263 (603)
T KOG0318|consen 236 -GSIFALSWSPDSTQFLTVSADKTIKIWD 263 (603)
T ss_pred -ccEEEEEECCCCceEEEecCCceEEEEE
Confidence 8999999999999999999999999997
No 46
>KOG0281|consensus
Probab=99.65 E-value=3.5e-16 Score=94.26 Aligned_cols=91 Identities=20% Similarity=0.301 Sum_probs=75.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
-+.|.+|++|++.+++.+..+.. |..++.++.+ .+.++++|+.|.+|++||+..|.+++.+++|+ .-|.
T Consensus 336 ASgDRTikvW~~st~efvRtl~g--HkRGIAClQY-----r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHE----eLvR 404 (499)
T KOG0281|consen 336 ASGDRTIKVWSTSTCEFVRTLNG--HKRGIACLQY-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE----ELVR 404 (499)
T ss_pred ecCCceEEEEeccceeeehhhhc--ccccceehhc-----cCeEEEecCCCceEEEEeccccHHHHHHhchH----Hhhh
Confidence 46899999999999999655554 4444444432 23338999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.|. ...++||+.||+|++||
T Consensus 405 ciRFd--~krIVSGaYDGkikvWd 426 (499)
T KOG0281|consen 405 CIRFD--NKRIVSGAYDGKIKVWD 426 (499)
T ss_pred heeec--CceeeeccccceEEEEe
Confidence 99995 66799999999999997
No 47
>KOG0281|consensus
Probab=99.64 E-value=1e-15 Score=92.25 Aligned_cols=92 Identities=15% Similarity=0.262 Sum_probs=76.3
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
....|++|+|||.++..++..+.. |.+.+.++.|... ++++|+.|.+|++||++++.+++++..|. ..|
T Consensus 212 SGlrDnTikiWD~n~~~c~~~L~G--HtGSVLCLqyd~r-----viisGSSDsTvrvWDv~tge~l~tlihHc----eaV 280 (499)
T KOG0281|consen 212 SGLRDNTIKIWDKNSLECLKILTG--HTGSVLCLQYDER-----VIVSGSSDSTVRVWDVNTGEPLNTLIHHC----EAV 280 (499)
T ss_pred cccccCceEEeccccHHHHHhhhc--CCCcEEeeeccce-----EEEecCCCceEEEEeccCCchhhHHhhhc----cee
Confidence 456899999999999998655555 4444444544332 37999999999999999999999999898 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.|+ ..++++|+.|+++.+||
T Consensus 281 Lhlrf~--ng~mvtcSkDrsiaVWd 303 (499)
T KOG0281|consen 281 LHLRFS--NGYMVTCSKDRSIAVWD 303 (499)
T ss_pred EEEEEe--CCEEEEecCCceeEEEe
Confidence 999997 56899999999999997
No 48
>KOG0276|consensus
Probab=99.64 E-value=1.7e-15 Score=96.66 Aligned_cols=96 Identities=21% Similarity=0.307 Sum_probs=84.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~ 80 (106)
+...|..|++|+..+++.+..+ +.|.+.+.++..+|..+. ++|+|.|.+|++||.+++ .+.+++.+|. ..
T Consensus 72 ~GsDD~~IrVfnynt~ekV~~F--eAH~DyIR~iavHPt~P~---vLtsSDDm~iKlW~we~~wa~~qtfeGH~----Hy 142 (794)
T KOG0276|consen 72 TGSDDMQIRVFNYNTGEKVKTF--EAHSDYIRSIAVHPTLPY---VLTSSDDMTIKLWDWENEWACEQTFEGHE----HY 142 (794)
T ss_pred EecCCceEEEEecccceeeEEe--eccccceeeeeecCCCCe---EEecCCccEEEEeeccCceeeeeEEcCcc----eE
Confidence 3568999999999999985554 446778888999999988 899999999999999975 6788899999 89
Q ss_pred eEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
|..++|+| |...++|+|-|++|++|.
T Consensus 143 VMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 143 VMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred EEEEEecCCCccceeeeeccccEEEEE
Confidence 99999999 677899999999999994
No 49
>KOG0289|consensus
Probab=99.63 E-value=4.3e-15 Score=91.32 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=84.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
-.+|++.-..|+.++..+-...-........+..|+|++-. |++|..|+.+++||+.....+..+.+|. +.|.
T Consensus 321 As~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLi---fgtgt~d~~vkiwdlks~~~~a~Fpght----~~vk 393 (506)
T KOG0289|consen 321 ASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLI---FGTGTPDGVVKIWDLKSQTNVAKFPGHT----GPVK 393 (506)
T ss_pred ecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceE---EeccCCCceEEEEEcCCccccccCCCCC----Ccee
Confidence 36899999999999998655544323344667889998877 8999999999999999999999999998 9999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++|+.+|.++++++.|+.|++||
T Consensus 394 ~i~FsENGY~Lat~add~~V~lwD 417 (506)
T KOG0289|consen 394 AISFSENGYWLATAADDGSVKLWD 417 (506)
T ss_pred EEEeccCceEEEEEecCCeEEEEE
Confidence 999999999999999999999998
No 50
>KOG0264|consensus
Probab=99.63 E-value=2.3e-15 Score=92.26 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=78.8
Q ss_pred CcCCCceEEEEeCccCcee----e-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cccchheecccc
Q psy17135 2 QKVPSSVIYIWTLLELQTY----A-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHR 74 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~ 74 (106)
+...|++|.+||+...... . +.....|.+.+..+.|++..... |++++.|+.+.|||.+ +.++.....+|.
T Consensus 195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~l--F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~ 272 (422)
T KOG0264|consen 195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDL--FGSVGDDGKLMIWDTRSNTSKPSHSVKAHS 272 (422)
T ss_pred eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhh--heeecCCCeEEEEEcCCCCCCCcccccccC
Confidence 4567999999999864431 1 12222355566679999988876 8999999999999999 455666777887
Q ss_pred ccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..++|++|+| ++..||+||.|++|.+||
T Consensus 273 ----~~vn~~~fnp~~~~ilAT~S~D~tV~LwD 301 (422)
T KOG0264|consen 273 ----AEVNCVAFNPFNEFILATGSADKTVALWD 301 (422)
T ss_pred ----CceeEEEeCCCCCceEEeccCCCcEEEee
Confidence 8999999999 777899999999999998
No 51
>KOG0313|consensus
Probab=99.63 E-value=1.1e-15 Score=92.35 Aligned_cols=94 Identities=19% Similarity=0.248 Sum_probs=79.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~ 79 (106)
..=|.+|+.||+.+++....... +....++.++|.... +++|+.|..+++||.+++. ...++.+|. .
T Consensus 277 ~SwDHTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~L---l~~gssdr~irl~DPR~~~gs~v~~s~~gH~----n 346 (423)
T KOG0313|consen 277 VSWDHTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKL---LASGSSDRHIRLWDPRTGDGSVVSQSLIGHK----N 346 (423)
T ss_pred ecccceEEEEEeecccceeeeec---CcceeEeecccccce---eeecCCCCceeecCCCCCCCceeEEeeecch----h
Confidence 34589999999999998777666 445778888887777 8999999999999999863 356778888 8
Q ss_pred CeEEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPS-KPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~-~~~~~s~~~d~~i~iwd 106 (106)
-|..+.|+|. ...|+|++.|+++++||
T Consensus 347 wVssvkwsp~~~~~~~S~S~D~t~klWD 374 (423)
T KOG0313|consen 347 WVSSVKWSPTNEFQLVSGSYDNTVKLWD 374 (423)
T ss_pred hhhheecCCCCceEEEEEecCCeEEEEE
Confidence 9999999994 45699999999999997
No 52
>PTZ00421 coronin; Provisional
Probab=99.63 E-value=6e-15 Score=94.24 Aligned_cols=96 Identities=11% Similarity=0.167 Sum_probs=76.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|+|||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||+++++.+..+..|.. ....
T Consensus 144 gs~DgtVrIWDl~tg~~~~~l~~--h~~~V~sla~spdG~l---Latgs~Dg~IrIwD~rsg~~v~tl~~H~~---~~~~ 215 (493)
T PTZ00421 144 AGADMVVNVWDVERGKAVEVIKC--HSDQITSLEWNLDGSL---LCTTSKDKKLNIIDPRDGTIVSSVEAHAS---AKSQ 215 (493)
T ss_pred EeCCCEEEEEECCCCeEEEEEcC--CCCceEEEEEECCCCE---EEEecCCCEEEEEECCCCcEEEEEecCCC---Ccce
Confidence 35699999999999887555443 4556778999998877 89999999999999999998888888862 3345
Q ss_pred EEEEcCCCCEEEEec----CCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAG----ADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~----~d~~i~iwd 106 (106)
.+.|.+++..+++++ .|+.|++||
T Consensus 216 ~~~w~~~~~~ivt~G~s~s~Dr~VklWD 243 (493)
T PTZ00421 216 RCLWAKRKDLIITLGCSKSQQRQIMLWD 243 (493)
T ss_pred EEEEcCCCCeEEEEecCCCCCCeEEEEe
Confidence 677888877776654 478999997
No 53
>KOG0284|consensus
Probab=99.63 E-value=7.4e-16 Score=93.91 Aligned_cols=95 Identities=18% Similarity=0.227 Sum_probs=80.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.-.+|.|++|+..-... .....+|...+..++|+|.... +++++.|++++|||....+..+.+.+|. -.|.
T Consensus 156 gD~gG~iKyWqpnmnnV--k~~~ahh~eaIRdlafSpnDsk---F~t~SdDg~ikiWdf~~~kee~vL~GHg----wdVk 226 (464)
T KOG0284|consen 156 GDKGGMIKYWQPNMNNV--KIIQAHHAEAIRDLAFSPNDSK---FLTCSDDGTIKIWDFRMPKEERVLRGHG----WDVK 226 (464)
T ss_pred cCCCceEEecccchhhh--HHhhHhhhhhhheeccCCCCce---eEEecCCCeEEEEeccCCchhheeccCC----CCcc
Confidence 45789999999864432 2222233356788999998887 8999999999999999999999999998 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|....++++|.|..|++||
T Consensus 227 svdWHP~kgLiasgskDnlVKlWD 250 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGSKDNLVKLWD 250 (464)
T ss_pred eeccCCccceeEEccCCceeEeec
Confidence 999999999999999999999998
No 54
>KOG0282|consensus
Probab=99.63 E-value=8.6e-16 Score=95.05 Aligned_cols=95 Identities=11% Similarity=0.183 Sum_probs=81.2
Q ss_pred CcCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.+.-|+.|+|||+.. ++++..+.. |...+..+.|+..+.. +++++.|+.+++||.++|+++..+... ..
T Consensus 232 S~gmD~~vklW~vy~~~~~lrtf~g--H~k~Vrd~~~s~~g~~---fLS~sfD~~lKlwDtETG~~~~~f~~~-----~~ 301 (503)
T KOG0282|consen 232 SGGMDGLVKLWNVYDDRRCLRTFKG--HRKPVRDASFNNCGTS---FLSASFDRFLKLWDTETGQVLSRFHLD-----KV 301 (503)
T ss_pred ecCCCceEEEEEEecCcceehhhhc--chhhhhhhhccccCCe---eeeeecceeeeeeccccceEEEEEecC-----CC
Confidence 356799999999987 777666665 4666777999998888 899999999999999999999888644 47
Q ss_pred eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
+.|+.|+|++ ..+++|+.|+.|+.||
T Consensus 302 ~~cvkf~pd~~n~fl~G~sd~ki~~wD 328 (503)
T KOG0282|consen 302 PTCVKFHPDNQNIFLVGGSDKKIRQWD 328 (503)
T ss_pred ceeeecCCCCCcEEEEecCCCcEEEEe
Confidence 8999999987 6799999999999997
No 55
>KOG0267|consensus
Probab=99.62 E-value=1.1e-15 Score=98.56 Aligned_cols=95 Identities=18% Similarity=0.342 Sum_probs=84.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..++|+|++||+.+.+.++.+.++ ......+.|+|.+.+ +++|+.|...++||.+...|...+.+|. ..+.
T Consensus 88 gsasgtiK~wDleeAk~vrtLtgh--~~~~~sv~f~P~~~~---~a~gStdtd~~iwD~Rk~Gc~~~~~s~~----~vv~ 158 (825)
T KOG0267|consen 88 GSASGTIKVWDLEEAKIVRTLTGH--LLNITSVDFHPYGEF---FASGSTDTDLKIWDIRKKGCSHTYKSHT----RVVD 158 (825)
T ss_pred cccCCceeeeehhhhhhhhhhhcc--ccCcceeeeccceEE---eccccccccceehhhhccCceeeecCCc----ceeE
Confidence 467999999999998887766663 455777889998888 7999999999999999888898998887 7899
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.|+|+|+++++++.|.++++||
T Consensus 159 ~l~lsP~Gr~v~~g~ed~tvki~d 182 (825)
T KOG0267|consen 159 VLRLSPDGRWVASGGEDNTVKIWD 182 (825)
T ss_pred EEeecCCCceeeccCCcceeeeec
Confidence 999999999999999999999997
No 56
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.61 E-value=1.3e-14 Score=97.30 Aligned_cols=94 Identities=16% Similarity=0.181 Sum_probs=76.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|++|++||+.+++.+..+.. |...+..+.|+|..... |++|+.|+.|++||++++.++..+..+ ..+.+
T Consensus 552 ~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~--L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-----~~v~~ 622 (793)
T PLN00181 552 NFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTL--LASGSDDGSVKLWSINQGVSIGTIKTK-----ANICC 622 (793)
T ss_pred eCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCE--EEEEcCCCEEEEEECCCCcEEEEEecC-----CCeEE
Confidence 4699999999999887555543 45667789998754332 899999999999999998888777643 57889
Q ss_pred EEEc-CCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFH-PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~-~~~~~~~s~~~d~~i~iwd 106 (106)
+.|+ +++..+++|+.|+.|++||
T Consensus 623 v~~~~~~g~~latgs~dg~I~iwD 646 (793)
T PLN00181 623 VQFPSESGRSLAFGSADHKVYYYD 646 (793)
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEE
Confidence 9995 5789999999999999997
No 57
>KOG0294|consensus
Probab=99.61 E-value=8.9e-15 Score=86.92 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=82.5
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|.+|+|||+++...+..+.. |.+.+.++.|.+..... .|++|+.||.|.+|+...-.++..+.+|. ..|
T Consensus 58 SGssDetI~IYDm~k~~qlg~ll~--HagsitaL~F~~~~S~s-hLlS~sdDG~i~iw~~~~W~~~~slK~H~----~~V 130 (362)
T KOG0294|consen 58 SGSSDETIHIYDMRKRKQLGILLS--HAGSITALKFYPPLSKS-HLLSGSDDGHIIIWRVGSWELLKSLKAHK----GQV 130 (362)
T ss_pred ccCCCCcEEEEeccchhhhcceec--cccceEEEEecCCcchh-heeeecCCCcEEEEEcCCeEEeeeecccc----ccc
Confidence 346899999999998776444433 46667788887776521 17999999999999999999999999999 789
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.++++|.+++..+.+.|+.+++|+
T Consensus 131 t~lsiHPS~KLALsVg~D~~lr~WN 155 (362)
T KOG0294|consen 131 TDLSIHPSGKLALSVGGDQVLRTWN 155 (362)
T ss_pred ceeEecCCCceEEEEcCCceeeeeh
Confidence 9999999999999999999999996
No 58
>KOG0273|consensus
Probab=99.60 E-value=1.2e-14 Score=90.06 Aligned_cols=96 Identities=19% Similarity=0.324 Sum_probs=85.4
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
++..|+.|+++-+...++...+.. |+..+..+.|.|.+.. |++++.|++++||+...+.+...+.+|. ..|
T Consensus 334 ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~n~tg~L---LaS~SdD~TlkiWs~~~~~~~~~l~~Hs----kei 404 (524)
T KOG0273|consen 334 TSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKWNPTGSL---LASCSDDGTLKIWSMGQSNSVHDLQAHS----KEI 404 (524)
T ss_pred ecCCCceEEEEEecCCCcceeeec--ccCceEEEEECCCCce---EEEecCCCeeEeeecCCCcchhhhhhhc----cce
Confidence 467899999999998888666666 5667889999999988 9999999999999999999999999999 899
Q ss_pred EEEEEcCCCC---------EEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKP---------FIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~---------~~~s~~~d~~i~iwd 106 (106)
..+.|+|.+. .+++++.|++|++||
T Consensus 405 ~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd 438 (524)
T KOG0273|consen 405 YTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD 438 (524)
T ss_pred eeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence 9999998653 689999999999997
No 59
>KOG0265|consensus
Probab=99.59 E-value=1.3e-14 Score=85.69 Aligned_cols=96 Identities=16% Similarity=0.230 Sum_probs=78.2
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
.+..|.+++.||+++|++..++.. |..-+..+. |......++.+++.|+++++||+++..+++++... -++
T Consensus 107 S~gtDk~v~~wD~~tG~~~rk~k~--h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k-----yql 177 (338)
T KOG0265|consen 107 SCGTDKTVRGWDAETGKRIRKHKG--HTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK-----YQL 177 (338)
T ss_pred EecCCceEEEEecccceeeehhcc--ccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhccccc-----eeE
Confidence 467899999999999999777766 343333343 54444455789999999999999999888888644 488
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++.|...+..+++|+=|+.|++||
T Consensus 178 tAv~f~d~s~qv~sggIdn~ikvWd 202 (338)
T KOG0265|consen 178 TAVGFKDTSDQVISGGIDNDIKVWD 202 (338)
T ss_pred EEEEecccccceeeccccCceeeec
Confidence 9999999999999999999999997
No 60
>PTZ00420 coronin; Provisional
Probab=99.59 E-value=2.4e-14 Score=92.53 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=71.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCcc--------chheeccccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKT--------CVQEITAHRK 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~--------~~~~~~~~~~ 75 (106)
.++.|++|+......+..+. .|...+..+.|+|.. .. +++|+.|+.|++||+.++. ++..+.+|.
T Consensus 52 ~~gvI~L~~~~r~~~v~~L~--gH~~~V~~lafsP~~~~l---LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~- 125 (568)
T PTZ00420 52 LIGAIRLENQMRKPPVIKLK--GHTSSILDLQFNPCFSEI---LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK- 125 (568)
T ss_pred ceeEEEeeecCCCceEEEEc--CCCCCEEEEEEcCCCCCE---EEEEeCCCeEEEEECCCCCccccccccceEEeecCC-
Confidence 46778888877665533333 355667789999974 44 8999999999999998642 233456676
Q ss_pred cCCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++.. +++++.|++|++||
T Consensus 126 ---~~V~sVaf~P~g~~iLaSgS~DgtIrIWD 154 (568)
T PTZ00420 126 ---KKISIIDWNPMNYYIMCSSGFDSFVNIWD 154 (568)
T ss_pred ---CcEEEEEECCCCCeEEEEEeCCCeEEEEE
Confidence 89999999998875 57999999999997
No 61
>KOG1445|consensus
Probab=99.59 E-value=3.6e-15 Score=95.72 Aligned_cols=97 Identities=20% Similarity=0.299 Sum_probs=80.5
Q ss_pred CCCceEEEEeCccCceeeeccc-----CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDC-----PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
..||.|++|-+..+..-..... ..|...+..+.|+|..... |++++.|.+|++||+.+++....+.+|.
T Consensus 647 ~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadv--La~asyd~Ti~lWDl~~~~~~~~l~gHt---- 720 (1012)
T KOG1445|consen 647 TDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADV--LAVASYDSTIELWDLANAKLYSRLVGHT---- 720 (1012)
T ss_pred ccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhH--hhhhhccceeeeeehhhhhhhheeccCc----
Confidence 3689999999976544222211 1245567779999987775 7899999999999999999988999999
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|+.++|||+|+.+++.|.||++++|.
T Consensus 721 dqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 721 DQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred CceeEEEECCCCcceeeeecCceEEEeC
Confidence 9999999999999999999999999974
No 62
>KOG0313|consensus
Probab=99.58 E-value=1.8e-14 Score=87.28 Aligned_cols=97 Identities=16% Similarity=0.300 Sum_probs=81.4
Q ss_pred cCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~ 80 (106)
...|..|++||-+++.- +.......|..-+..+.|+|...+. |++++.|+++++||+++.+ ++..+.+|. +.
T Consensus 318 gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~--~~S~S~D~t~klWDvRS~k~plydI~~h~----DK 391 (423)
T KOG0313|consen 318 GSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQ--LVSGSYDNTVKLWDVRSTKAPLYDIAGHN----DK 391 (423)
T ss_pred cCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceE--EEEEecCCeEEEEEeccCCCcceeeccCC----ce
Confidence 46789999999987543 3344444466677789999999987 8999999999999999877 899999998 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.++.|+. +..+++|+.|.+++++.
T Consensus 392 vl~vdW~~-~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 392 VLSVDWNE-GGLIVSGGADNKLRIFK 416 (423)
T ss_pred EEEEeccC-CceEEeccCcceEEEec
Confidence 99999985 56899999999999873
No 63
>KOG0306|consensus
Probab=99.58 E-value=1e-14 Score=94.56 Aligned_cols=97 Identities=15% Similarity=0.281 Sum_probs=88.5
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.|+++|..|++|-+.-|.| ......|.+.+.++.|.|.... +.+++.|+.++-||-..-..+.++.+|. ..
T Consensus 566 vTgSADKnVKiWGLdFGDC--HKS~fAHdDSvm~V~F~P~~~~---FFt~gKD~kvKqWDg~kFe~iq~L~~H~----~e 636 (888)
T KOG0306|consen 566 VTGSADKNVKIWGLDFGDC--HKSFFAHDDSVMSVQFLPKTHL---FFTCGKDGKVKQWDGEKFEEIQKLDGHH----SE 636 (888)
T ss_pred EeccCCCceEEeccccchh--hhhhhcccCceeEEEEccccee---EEEecCcceEEeechhhhhhheeeccch----he
Confidence 3788999999999999999 6666667777889999997777 8999999999999999889999999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|+|++.+|+|.+++|++.|..|++|.
T Consensus 637 v~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 637 VWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred eeeeEEcCCCCeEEeccCCceeEeee
Confidence 99999999999999999999999994
No 64
>KOG1034|consensus
Probab=99.57 E-value=1.8e-14 Score=86.09 Aligned_cols=94 Identities=24% Similarity=0.313 Sum_probs=79.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---cccccCCCCe
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHRKKFDESI 81 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~v 81 (106)
.-|.|+|.|+.++++...+.. |...+..+.+.|..... +++++.|..|++|++++..|+..+- +|+ +.|
T Consensus 113 ~~GvIrVid~~~~~~~~~~~g--hG~sINeik~~p~~~ql--vls~SkD~svRlwnI~~~~Cv~VfGG~egHr----deV 184 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRG--HGGSINEIKFHPDRPQL--VLSASKDHSVRLWNIQTDVCVAVFGGVEGHR----DEV 184 (385)
T ss_pred ceeEEEEEecchhhhccceec--cCccchhhhcCCCCCcE--EEEecCCceEEEEeccCCeEEEEeccccccc----CcE
Confidence 358899999999888555544 34457779999987765 7899999999999999999887664 455 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++.|++++..++||+-|..+.+|+
T Consensus 185 LSvD~~~~gd~i~ScGmDhslk~W~ 209 (385)
T KOG1034|consen 185 LSVDFSLDGDRIASCGMDHSLKLWR 209 (385)
T ss_pred EEEEEcCCCCeeeccCCcceEEEEe
Confidence 9999999999999999999999996
No 65
>KOG0275|consensus
Probab=99.57 E-value=2.9e-15 Score=89.81 Aligned_cols=97 Identities=14% Similarity=0.280 Sum_probs=82.2
Q ss_pred CcCCCceEEEEeCccCceeeecccCC------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-ccc
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPE------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHR 74 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~ 74 (106)
+.+-||.|-+||..+|+.-..+..+. ....+.++.|+.+++. +++|+.||.|++|.+.+|.|++.+. +|.
T Consensus 230 sgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEM---lAsGsqDGkIKvWri~tG~ClRrFdrAHt 306 (508)
T KOG0275|consen 230 SGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEM---LASGSQDGKIKVWRIETGQCLRRFDRAHT 306 (508)
T ss_pred eccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHH---hhccCcCCcEEEEEEecchHHHHhhhhhc
Confidence 45679999999999988744343332 3455677888888888 8999999999999999999999996 777
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.+|+++.|+.|+..+.+++.|.++++.
T Consensus 307 ----kGvt~l~FSrD~SqiLS~sfD~tvRiH 333 (508)
T KOG0275|consen 307 ----KGVTCLSFSRDNSQILSASFDQTVRIH 333 (508)
T ss_pred ----cCeeEEEEccCcchhhcccccceEEEe
Confidence 899999999999999999999999874
No 66
>KOG0645|consensus
Probab=99.56 E-value=9.7e-14 Score=81.15 Aligned_cols=98 Identities=16% Similarity=0.288 Sum_probs=82.1
Q ss_pred CcCCCceEEEEeCccCceeeec-ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARN-DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKF 77 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~ 77 (106)
++.+|..|=||.+..+...... .++.|...+..+.|+|.... |++++.|.+|++|.-.. -.+..++.+|.
T Consensus 122 TCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl---L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~--- 195 (312)
T KOG0645|consen 122 TCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL---LFSCSYDNTIKVYRDEDDDDWECVQTLDGHE--- 195 (312)
T ss_pred EeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce---eEEeccCCeEEEEeecCCCCeeEEEEecCcc---
Confidence 5789999999999865543332 33446667888999998888 89999999999997662 25788999998
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.-|++++|++.|..+++++.|++++||.
T Consensus 196 -~TVW~~~F~~~G~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 196 -NTVWSLAFDNIGSRLVSCSDDGTVSIWR 223 (312)
T ss_pred -ceEEEEEecCCCceEEEecCCcceEeee
Confidence 8999999999999999999999999983
No 67
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.56 E-value=5.7e-14 Score=94.24 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=74.5
Q ss_pred cCCCceEEEEeCccCc----eee--ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135 3 KVPSSVIYIWTLLELQ----TYA--RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 76 (106)
...|++|+|||+.... ... ..... +...+..+.|.+..... +++++.|+.|++||+.+++.+..+..|.
T Consensus 501 gg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~--las~~~Dg~v~lWd~~~~~~~~~~~~H~-- 575 (793)
T PLN00181 501 AGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQ--VASSNFEGVVQVWDVARSQLVTEMKEHE-- 575 (793)
T ss_pred EeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCE--EEEEeCCCeEEEEECCCCeEEEEecCCC--
Confidence 4679999999986421 100 01111 23345667888764333 7999999999999999998888888888
Q ss_pred CCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..|++++|+| ++..|++|+.|++|++||
T Consensus 576 --~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 576 --KRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred --CCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 8999999997 788999999999999997
No 68
>KOG0316|consensus
Probab=99.56 E-value=6.4e-14 Score=80.78 Aligned_cols=100 Identities=14% Similarity=0.202 Sum_probs=72.2
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheecccc-----
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHR----- 74 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~----- 74 (106)
.+..|..|.+||+.+|+...++.. |...++.+.|+..+.. +++|+.|.++++||.+.. ++++.+....
T Consensus 76 s~GgDk~v~vwDV~TGkv~Rr~rg--H~aqVNtV~fNeesSV---v~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~S 150 (307)
T KOG0316|consen 76 SCGGDKAVQVWDVNTGKVDRRFRG--HLAQVNTVRFNEESSV---VASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSS 150 (307)
T ss_pred cCCCCceEEEEEcccCeeeeeccc--ccceeeEEEecCcceE---EEeccccceeEEEEcccCCCCccchhhhhcCceeE
Confidence 367899999999999999777776 4566888999888877 899999999999999865 3455444332
Q ss_pred -------c----------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 -------K----------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 -------~----------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. -....|+++.|+++++....++-|+++++-|
T Consensus 151 i~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 151 IDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLD 211 (307)
T ss_pred EEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecc
Confidence 0 0224566666666666666666666666543
No 69
>KOG0265|consensus
Probab=99.56 E-value=2.2e-14 Score=84.74 Aligned_cols=94 Identities=15% Similarity=0.292 Sum_probs=82.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+++++||+++.+++..+.. ......+.|...+.. +.+|+-|+.|++||++....+..+.+|. +.|+
T Consensus 151 gsdD~t~kl~D~R~k~~~~t~~~---kyqltAv~f~d~s~q---v~sggIdn~ikvWd~r~~d~~~~lsGh~----DtIt 220 (338)
T KOG0265|consen 151 GSDDGTLKLWDIRKKEAIKTFEN---KYQLTAVGFKDTSDQ---VISGGIDNDIKVWDLRKNDGLYTLSGHA----DTIT 220 (338)
T ss_pred cCCCceEEEEeecccchhhcccc---ceeEEEEEecccccc---eeeccccCceeeeccccCcceEEeeccc----Ccee
Confidence 46899999999998887666544 234566788888877 7999999999999999999999999999 9999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+..+|++..+.+-+-|.++++||
T Consensus 221 ~lsls~~gs~llsnsMd~tvrvwd 244 (338)
T KOG0265|consen 221 GLSLSRYGSFLLSNSMDNTVRVWD 244 (338)
T ss_pred eEEeccCCCccccccccceEEEEE
Confidence 999999999999999999999997
No 70
>KOG0643|consensus
Probab=99.55 E-value=5.6e-14 Score=82.15 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=78.6
Q ss_pred CCcCCCceEEEEeCccCceeeecccCC---------------------------------------------------CC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPE---------------------------------------------------LN 29 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~---------------------------------------------------~~ 29 (106)
|+..+|.++++||+.+|+.+..++... +.
T Consensus 68 iTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ 147 (327)
T KOG0643|consen 68 ITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD 147 (327)
T ss_pred eeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc
Confidence 567889999999998888755443321 22
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+..+.|.|.+.. +++|.+||.|..||+++|+. +.....|. ..|+.+.++++..+++++|.|.+.++||
T Consensus 148 skit~a~Wg~l~~~---ii~Ghe~G~is~~da~~g~~~v~s~~~h~----~~Ind~q~s~d~T~FiT~s~Dttakl~D 218 (327)
T KOG0643|consen 148 SKITSALWGPLGET---IIAGHEDGSISIYDARTGKELVDSDEEHS----SKINDLQFSRDRTYFITGSKDTTAKLVD 218 (327)
T ss_pred cceeeeeecccCCE---EEEecCCCcEEEEEcccCceeeechhhhc----cccccccccCCcceEEecccCccceeee
Confidence 33455667777777 89999999999999999864 44456677 7999999999999999999999999987
No 71
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.55 E-value=1.3e-13 Score=80.96 Aligned_cols=94 Identities=22% Similarity=0.415 Sum_probs=77.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.+..+.. +...+..+.|.|.+.. +++++.++.+++|++.+++....+..|. ..+.+
T Consensus 196 ~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~---~~~~~~~~~i~i~~~~~~~~~~~~~~~~----~~i~~ 266 (289)
T cd00200 196 SSDGTIKLWDLSTGKCLGTLRG--HENGVNSVAFSPDGYL---LASGSEDGTIRVWDLRTGECVQTLSGHT----NSVTS 266 (289)
T ss_pred cCCCcEEEEECCCCceecchhh--cCCceEEEEEcCCCcE---EEEEcCCCcEEEEEcCCceeEEEccccC----CcEEE
Confidence 3489999999998887555432 3445667888887444 6778889999999999888888888777 79999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|+|++..+++++.|+.+++|+
T Consensus 267 ~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 267 LAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEECCCCCEEEEecCCCeEEecC
Confidence 99999999999999999999997
No 72
>KOG0303|consensus
Probab=99.55 E-value=3.1e-14 Score=86.85 Aligned_cols=98 Identities=12% Similarity=0.226 Sum_probs=81.2
Q ss_pred CcCCCceEEEEeCccCceeeecc-----cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135 2 QKVPSSVIYIWTLLELQTYARND-----CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK 76 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 76 (106)
+++.|.+|.||.+-.+.....+. +..|...+..+.|+|.-... |++++.|.+|.+|++.+|..+-++. |+
T Consensus 99 SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NV--Llsag~Dn~v~iWnv~tgeali~l~-hp-- 173 (472)
T KOG0303|consen 99 SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNV--LLSAGSDNTVSIWNVGTGEALITLD-HP-- 173 (472)
T ss_pred cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhh--HhhccCCceEEEEeccCCceeeecC-CC--
Confidence 35789999999997655433222 22256667779999987765 7899999999999999999887777 88
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|.++.|+-+|..+++.+.|..|++||
T Consensus 174 --d~i~S~sfn~dGs~l~TtckDKkvRv~d 201 (472)
T KOG0303|consen 174 --DMVYSMSFNRDGSLLCTTCKDKKVRVID 201 (472)
T ss_pred --CeEEEEEeccCCceeeeecccceeEEEc
Confidence 8999999999999999999999999997
No 73
>KOG0283|consensus
Probab=99.55 E-value=3.4e-14 Score=92.34 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=80.2
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+..-|.||++|++....++..|. |+..+.++.|+|..... +++|+-|+.+|||++...+.+.....+ .-|
T Consensus 385 SSSMDKTVRLWh~~~~~CL~~F~---HndfVTcVaFnPvDDry--FiSGSLD~KvRiWsI~d~~Vv~W~Dl~-----~lI 454 (712)
T KOG0283|consen 385 SSSMDKTVRLWHPGRKECLKVFS---HNDFVTCVAFNPVDDRY--FISGSLDGKVRLWSISDKKVVDWNDLR-----DLI 454 (712)
T ss_pred eccccccEEeecCCCcceeeEEe---cCCeeEEEEecccCCCc--EeecccccceEEeecCcCeeEeehhhh-----hhh
Confidence 45679999999999999866555 57778889999987765 899999999999999877755444433 689
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++.|+|+|...+.|+.+|.+++|+
T Consensus 455 TAvcy~PdGk~avIGt~~G~C~fY~ 479 (712)
T KOG0283|consen 455 TAVCYSPDGKGAVIGTFNGYCRFYD 479 (712)
T ss_pred eeEEeccCCceEEEEEeccEEEEEE
Confidence 9999999999999999999999874
No 74
>KOG0274|consensus
Probab=99.55 E-value=5.8e-14 Score=90.34 Aligned_cols=91 Identities=11% Similarity=0.212 Sum_probs=75.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
+.|.+|++|++.+++.+..+.. |...+.++... ... +++|+.|++|++||+.++++++.+.+|. ..|.+
T Consensus 308 s~D~tVkVW~v~n~~~l~l~~~--h~~~V~~v~~~--~~~---lvsgs~d~~v~VW~~~~~~cl~sl~gH~----~~V~s 376 (537)
T KOG0274|consen 308 SRDNTVKVWDVTNGACLNLLRG--HTGPVNCVQLD--EPL---LVSGSYDGTVKVWDPRTGKCLKSLSGHT----GRVYS 376 (537)
T ss_pred cCCceEEEEeccCcceEEEecc--ccccEEEEEec--CCE---EEEEecCceEEEEEhhhceeeeeecCCc----ceEEE
Confidence 5789999999998888666655 44445445433 444 7999999999999999999999999999 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+.+. ..+++|+.|++|++||
T Consensus 377 l~~~~~-~~~~Sgs~D~~IkvWd 398 (537)
T KOG0274|consen 377 LIVDSE-NRLLSGSLDTTIKVWD 398 (537)
T ss_pred EEecCc-ceEEeeeeccceEeec
Confidence 988654 8899999999999997
No 75
>KOG0640|consensus
Probab=99.54 E-value=3.8e-14 Score=84.55 Aligned_cols=101 Identities=11% Similarity=0.174 Sum_probs=78.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...+|++|+++|+........++.......+.++.|+|.+.. ++.|.....+++||+++-+|...-. +...|.+.|
T Consensus 189 S~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGef---llvgTdHp~~rlYdv~T~Qcfvsan-Pd~qht~ai 264 (430)
T KOG0640|consen 189 SGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEF---LLVGTDHPTLRLYDVNTYQCFVSAN-PDDQHTGAI 264 (430)
T ss_pred eccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCce---EEEecCCCceeEEeccceeEeeecC-cccccccce
Confidence 457899999999976443223333222334677999999988 8899999999999999988754433 222344899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++.|++.+...++++.||.|++||
T Consensus 265 ~~V~Ys~t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 265 TQVRYSSTGSLYVTASKDGAIKLWD 289 (430)
T ss_pred eEEEecCCccEEEEeccCCcEEeec
Confidence 9999999999999999999999998
No 76
>KOG0640|consensus
Probab=99.54 E-value=6.3e-14 Score=83.61 Aligned_cols=95 Identities=17% Similarity=0.345 Sum_probs=80.0
Q ss_pred CceEEEEeCccCceeeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~ 83 (106)
-.++++||+++.++......+ .|...+..+.+++.+.. .++++.||.|++||--.++|+.++. +|.+ ..|++
T Consensus 237 Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~l---YvTaSkDG~IklwDGVS~rCv~t~~~AH~g---sevcS 310 (430)
T KOG0640|consen 237 HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSL---YVTASKDGAIKLWDGVSNRCVRTIGNAHGG---SEVCS 310 (430)
T ss_pred CCceeEEeccceeEeeecCcccccccceeEEEecCCccE---EEEeccCCcEEeeccccHHHHHHHHhhcCC---ceeee
Confidence 467999999999987665443 35555666888888777 7999999999999999999999985 4553 78999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|..+++++.+++.|..+++|.
T Consensus 311 a~Ftkn~kyiLsSG~DS~vkLWE 333 (430)
T KOG0640|consen 311 AVFTKNGKYILSSGKDSTVKLWE 333 (430)
T ss_pred EEEccCCeEEeecCCcceeeeee
Confidence 99999999999999999999995
No 77
>KOG4283|consensus
Probab=99.53 E-value=4e-14 Score=83.89 Aligned_cols=99 Identities=17% Similarity=0.270 Sum_probs=79.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheecccc--------
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHR-------- 74 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~-------- 74 (106)
.+|.+|++-|+++|.. ...+..|..++..+.|+|..+.. |++|+.||.+++||++.. .|...+..|.
T Consensus 165 tr~~~VrLCDi~SGs~--sH~LsGHr~~vlaV~Wsp~~e~v--LatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~ 240 (397)
T KOG4283|consen 165 TRDVQVRLCDIASGSF--SHTLSGHRDGVLAVEWSPSSEWV--LATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILK 240 (397)
T ss_pred cCCCcEEEEeccCCcc--eeeeccccCceEEEEeccCceeE--EEecCCCceEEEEEeecccceeEEeecccCccCcccc
Confidence 4688999999999999 44444467888999999999886 899999999999999864 3444333322
Q ss_pred --ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 --KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 --~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+.++.++|+.++.++++++.|..+++|.
T Consensus 241 ~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn 274 (397)
T KOG4283|consen 241 TNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWN 274 (397)
T ss_pred ccccccceeeeeeecccchhhhhccCccceEEee
Confidence 11337899999999999999999999999994
No 78
>KOG0274|consensus
Probab=99.53 E-value=8.3e-14 Score=89.64 Aligned_cols=91 Identities=19% Similarity=0.342 Sum_probs=74.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|.++++||+.++++...+.. |.+ ...+... .... +++|+.|.+|++|++.+++++..+.+|. ..|.
T Consensus 267 gS~D~t~rvWd~~sg~C~~~l~g--h~s-tv~~~~~--~~~~--~~sgs~D~tVkVW~v~n~~~l~l~~~h~----~~V~ 335 (537)
T KOG0274|consen 267 GSTDKTERVWDCSTGECTHSLQG--HTS-SVRCLTI--DPFL--LVSGSRDNTVKVWDVTNGACLNLLRGHT----GPVN 335 (537)
T ss_pred EecCCcEEeEecCCCcEEEEecC--CCc-eEEEEEc--cCce--EeeccCCceEEEEeccCcceEEEecccc----ccEE
Confidence 45699999999999999777765 333 3333322 2222 6889999999999999999999999988 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.++ +..+++|+.|++|++||
T Consensus 336 ~v~~~--~~~lvsgs~d~~v~VW~ 357 (537)
T KOG0274|consen 336 CVQLD--EPLLVSGSYDGTVKVWD 357 (537)
T ss_pred EEEec--CCEEEEEecCceEEEEE
Confidence 99997 78999999999999996
No 79
>KOG0318|consensus
Probab=99.52 E-value=2.8e-13 Score=85.12 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=83.1
Q ss_pred cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-------
Q psy17135 3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR------- 74 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~------- 74 (106)
-..||+|.+||=++++.+..+. ...|...+..+.|+|++.. ++|++.|.++++||+.+.++++++.-..
T Consensus 208 ~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~---~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqv 284 (603)
T KOG0318|consen 208 AGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQ---FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQV 284 (603)
T ss_pred ecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCce---EEEecCCceEEEEEeeccceEEEeecCCchhceEE
Confidence 3579999999999999977776 3456777888999999999 8999999999999988776654432110
Q ss_pred --------------------------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 --------------------------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 --------------------------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+|...|+++..+|++.+|.||+.||.|.-|+
T Consensus 285 G~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 285 GCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred EEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEe
Confidence 02457999999999999999999999999886
No 80
>KOG0310|consensus
Probab=99.52 E-value=4.3e-14 Score=87.67 Aligned_cols=95 Identities=12% Similarity=0.195 Sum_probs=77.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-..|.|+++|+++... ......|+..+....|.|..... +++|+.|+.+++||+.+......+.+|. +.|.+
T Consensus 87 D~sG~V~vfD~k~r~i--LR~~~ah~apv~~~~f~~~d~t~--l~s~sDd~v~k~~d~s~a~v~~~l~~ht----DYVR~ 158 (487)
T KOG0310|consen 87 DESGHVKVFDMKSRVI--LRQLYAHQAPVHVTKFSPQDNTM--LVSGSDDKVVKYWDLSTAYVQAELSGHT----DYVRC 158 (487)
T ss_pred CCcCcEEEeccccHHH--HHHHhhccCceeEEEecccCCeE--EEecCCCceEEEEEcCCcEEEEEecCCc----ceeEe
Confidence 3578999999776333 22333456667778899988876 7899999999999999888655788898 99999
Q ss_pred EEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
.+++|-. ..++|||.||+|++||
T Consensus 159 g~~~~~~~hivvtGsYDg~vrl~D 182 (487)
T KOG0310|consen 159 GDISPANDHIVVTGSYDGKVRLWD 182 (487)
T ss_pred eccccCCCeEEEecCCCceEEEEE
Confidence 9999954 4799999999999997
No 81
>KOG0269|consensus
Probab=99.52 E-value=4.7e-14 Score=91.63 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=80.1
Q ss_pred CcCCCceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
++.+.|.|.+||+........ ...-.|...+..+.|++..... |++|+.||.|++||++..+...++.+.. ..
T Consensus 105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~i--liSGSQDg~vK~~DlR~~~S~~t~~~nS----ES 178 (839)
T KOG0269|consen 105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNI--LISGSQDGTVKCWDLRSKKSKSTFRSNS----ES 178 (839)
T ss_pred eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccE--EEecCCCceEEEEeeecccccccccccc----hh
Confidence 567899999999987322111 1223355567889999988886 8899999999999999988888887766 79
Q ss_pred eEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
|..++|+| .+..++++...|.+++||
T Consensus 179 iRDV~fsp~~~~~F~s~~dsG~lqlWD 205 (839)
T KOG0269|consen 179 IRDVKFSPGYGNKFASIHDSGYLQLWD 205 (839)
T ss_pred hhceeeccCCCceEEEecCCceEEEee
Confidence 99999999 667799999999999998
No 82
>KOG0288|consensus
Probab=99.52 E-value=1.2e-13 Score=84.60 Aligned_cols=100 Identities=11% Similarity=0.141 Sum_probs=81.8
Q ss_pred CcCCCceEEEEeCccCceeeecccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
++++|.++.+.|+++.+....+.-. ........+.|+|.+.+ +++|++||.|+||++.++++...+...... .
T Consensus 358 sssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Y---vaAGS~dgsv~iW~v~tgKlE~~l~~s~s~--~ 432 (459)
T KOG0288|consen 358 SSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSY---VAAGSADGSVYIWSVFTGKLEKVLSLSTSN--A 432 (459)
T ss_pred eecCCCceeeeecccccEEEEeeccccccccccceeEECCCCce---eeeccCCCcEEEEEccCceEEEEeccCCCC--c
Confidence 5689999999999998775544322 12234566889999999 899999999999999999998887665521 3
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|++++|+|.|..+++++.++.+.+|.
T Consensus 433 aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 433 AITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ceEEEEEcCCCchhhcccCCcceEecC
Confidence 699999999999999999999999994
No 83
>KOG1007|consensus
Probab=99.52 E-value=5.3e-14 Score=83.09 Aligned_cols=96 Identities=20% Similarity=0.325 Sum_probs=78.4
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~ 82 (106)
..|+++..||+++........-. |...+..+.|+|..+.. +++|+.|+.|++||.++. .++..+..|. --|+
T Consensus 190 t~d~tl~~~D~RT~~~~~sI~dA-Hgq~vrdlDfNpnkq~~--lvt~gDdgyvriWD~R~tk~pv~el~~Hs----HWvW 262 (370)
T KOG1007|consen 190 TSDSTLQFWDLRTMKKNNSIEDA-HGQRVRDLDFNPNKQHI--LVTCGDDGYVRIWDTRKTKFPVQELPGHS----HWVW 262 (370)
T ss_pred eCCCcEEEEEccchhhhcchhhh-hcceeeeccCCCCceEE--EEEcCCCccEEEEeccCCCccccccCCCc----eEEE
Confidence 36899999999998874444433 33346778999988876 899999999999999974 5788999998 7999
Q ss_pred EEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPS-KPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~-~~~~~s~~~d~~i~iwd 106 (106)
++.|+|. ..++.+++.|..|.+|.
T Consensus 263 ~VRfn~~hdqLiLs~~SDs~V~Lsc 287 (370)
T KOG1007|consen 263 AVRFNPEHDQLILSGGSDSAVNLSC 287 (370)
T ss_pred EEEecCccceEEEecCCCceeEEEe
Confidence 9999994 45689999999998873
No 84
>KOG1407|consensus
Probab=99.52 E-value=2.7e-13 Score=79.06 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=73.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----------------
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---------------- 65 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---------------- 65 (106)
+-.+|.+|++||.+.+++...... ..+-..+.|+|.+++ ++.++.|-.|.+.|.++.+
T Consensus 82 tas~dk~ir~wd~r~~k~~~~i~~---~~eni~i~wsp~g~~---~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w 155 (313)
T KOG1407|consen 82 TASGDKTIRIWDIRSGKCTARIET---KGENINITWSPDGEY---IAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISW 155 (313)
T ss_pred EecCCceEEEEEeccCcEEEEeec---cCcceEEEEcCCCCE---EEEecCcccEEEEEecccceeehhcccceeeeeee
Confidence 446789999999999999666655 334456788898888 6777777777777755432
Q ss_pred -------------------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 -------------------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 -------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..+++|+ ....|+.|+|+|+++|+|+.|..+.+||
T Consensus 156 ~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~----snCicI~f~p~GryfA~GsADAlvSLWD 217 (313)
T KOG1407|consen 156 NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP----SNCICIEFDPDGRYFATGSADALVSLWD 217 (313)
T ss_pred cCCCCEEEEecCCceEEEEeccccccccccccCC----cceEEEEECCCCceEeeccccceeeccC
Confidence 223344555 8899999999999999999999999998
No 85
>KOG0308|consensus
Probab=99.52 E-value=1.1e-13 Score=88.67 Aligned_cols=95 Identities=14% Similarity=0.226 Sum_probs=75.5
Q ss_pred CCceEEEEeCccCce--eeeccc------C-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 5 PSSVIYIWTLLELQT--YARNDC------P-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~--~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
=|+.|.+||+.++.. +..+.. . .+...+.+++.++.+.. +++|+.++-+++||.++++.+-.+.+|.
T Consensus 138 LD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~---ivsGgtek~lr~wDprt~~kimkLrGHT- 213 (735)
T KOG0308|consen 138 LDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTI---IVSGGTEKDLRLWDPRTCKKIMKLRGHT- 213 (735)
T ss_pred CCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceE---EEecCcccceEEeccccccceeeeeccc-
Confidence 478999999998732 222211 1 12333455666666644 8999999999999999999888899999
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.++..+++|..++|++.||+|++||
T Consensus 214 ---dNVr~ll~~dDGt~~ls~sSDgtIrlWd 241 (735)
T KOG0308|consen 214 ---DNVRVLLVNDDGTRLLSASSDGTIRLWD 241 (735)
T ss_pred ---cceEEEEEcCCCCeEeecCCCceEEeee
Confidence 8999999999999999999999999997
No 86
>KOG0310|consensus
Probab=99.51 E-value=2.1e-13 Score=84.71 Aligned_cols=94 Identities=22% Similarity=0.284 Sum_probs=78.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v 81 (106)
...|+.+++||+.+... ......|.+.+.+..++|..... ++||+.||.|++||.+.. ..+..+. |. ..|
T Consensus 129 ~sDd~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hi--vvtGsYDg~vrl~DtR~~~~~v~eln-hg----~pV 199 (487)
T KOG0310|consen 129 GSDDKVVKYWDLSTAYV--QAELSGHTDYVRCGDISPANDHI--VVTGSYDGKVRLWDTRSLTSRVVELN-HG----CPV 199 (487)
T ss_pred cCCCceEEEEEcCCcEE--EEEecCCcceeEeeccccCCCeE--EEecCCCceEEEEEeccCCceeEEec-CC----Cce
Confidence 46789999999998874 55666678889999999987766 789999999999999986 4455554 55 789
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+-|.|..+++++ ...+++||
T Consensus 200 e~vl~lpsgs~iasAg-Gn~vkVWD 223 (487)
T KOG0310|consen 200 ESVLALPSGSLIASAG-GNSVKVWD 223 (487)
T ss_pred eeEEEcCCCCEEEEcC-CCeEEEEE
Confidence 9999999999999987 67899997
No 87
>KOG0302|consensus
Probab=99.51 E-value=1.2e-13 Score=83.90 Aligned_cols=95 Identities=18% Similarity=0.251 Sum_probs=73.2
Q ss_pred CceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh--eeccccccCCCCeE
Q psy17135 6 SSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ--EITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~v~ 82 (106)
-+.|++|...++....- ...-.|+..+-.+.|+|..... |++|+.|++|+|||++.++... ...+|. ..|+
T Consensus 233 ~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~v--faScS~DgsIrIWDiRs~~~~~~~~~kAh~----sDVN 306 (440)
T KOG0302|consen 233 VKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGV--FASCSCDGSIRIWDIRSGPKKAAVSTKAHN----SDVN 306 (440)
T ss_pred ccceEeeeeccCceeecCccccccccchhhhccCCccCce--EEeeecCceEEEEEecCCCccceeEeeccC----Ccee
Confidence 45689999988665221 1222255566678999977665 7999999999999999884322 225676 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.|+-...+|++|+.||+++|||
T Consensus 307 VISWnr~~~lLasG~DdGt~~iwD 330 (440)
T KOG0302|consen 307 VISWNRREPLLASGGDDGTLSIWD 330 (440)
T ss_pred eEEccCCcceeeecCCCceEEEEE
Confidence 999999888999999999999997
No 88
>KOG0639|consensus
Probab=99.51 E-value=6.5e-14 Score=87.91 Aligned_cols=92 Identities=21% Similarity=0.323 Sum_probs=74.6
Q ss_pred CceEEEEeCccCceeeecccCCCCCCC--CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEP--PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-.++.|||+..... +.+-+...... ..+..+|+... .+++..||.|.|||+.+...++++++|. +++.|
T Consensus 486 astlsiWDLAapTp--rikaeltssapaCyALa~spDakv---cFsccsdGnI~vwDLhnq~~VrqfqGht----DGasc 556 (705)
T KOG0639|consen 486 ASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDAKV---CFSCCSDGNIAVWDLHNQTLVRQFQGHT----DGASC 556 (705)
T ss_pred cceeeeeeccCCCc--chhhhcCCcchhhhhhhcCCccce---eeeeccCCcEEEEEcccceeeecccCCC----CCcee
Confidence 45799999998776 44333222211 22455666665 6888999999999999999999999999 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.++++|..|.+|+.|.++|-||
T Consensus 557 Idis~dGtklWTGGlDntvRcWD 579 (705)
T KOG0639|consen 557 IDISKDGTKLWTGGLDNTVRCWD 579 (705)
T ss_pred EEecCCCceeecCCCccceeehh
Confidence 99999999999999999999997
No 89
>KOG0283|consensus
Probab=99.50 E-value=5.4e-14 Score=91.42 Aligned_cols=70 Identities=20% Similarity=0.398 Sum_probs=60.5
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
|...+..+.|+..+ . |+++++|.+||+|++....|++.+. |. +.|+|++|+| |.++++||+-|+.+|||.
T Consensus 368 Ht~DILDlSWSKn~-f---LLSSSMDKTVRLWh~~~~~CL~~F~-Hn----dfVTcVaFnPvDDryFiSGSLD~KvRiWs 438 (712)
T KOG0283|consen 368 HTADILDLSWSKNN-F---LLSSSMDKTVRLWHPGRKECLKVFS-HN----DFVTCVAFNPVDDRYFISGSLDGKVRLWS 438 (712)
T ss_pred cchhheecccccCC-e---eEeccccccEEeecCCCcceeeEEe-cC----CeeEEEEecccCCCcEeecccccceEEee
Confidence 55556667776643 3 7999999999999999899998886 77 8999999999 889999999999999995
No 90
>KOG0322|consensus
Probab=99.50 E-value=1.2e-13 Score=80.70 Aligned_cols=96 Identities=18% Similarity=0.254 Sum_probs=76.4
Q ss_pred CCCceEEEEeCcc--CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLE--LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
.++..+..|.++. +.+..+......+.++..+..-|++.. ++|++.|+.+|+|+.++.+++..+.-|. +.|
T Consensus 224 ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KI---lATAGWD~RiRVyswrtl~pLAVLkyHs----agv 296 (323)
T KOG0322|consen 224 GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKI---LATAGWDHRIRVYSWRTLNPLAVLKYHS----AGV 296 (323)
T ss_pred CccccceeeeeccccCcccccceEEecCCCccceEEccCCcE---EeecccCCcEEEEEeccCCchhhhhhhh----cce
Confidence 4556677888764 343222222223445666666777766 8999999999999999999999999998 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++|+|+...+|+++.|.+|.+|+
T Consensus 297 n~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 297 NAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred eEEEeCCCCchhhhccCCceEEeee
Confidence 9999999999999999999999996
No 91
>KOG0268|consensus
Probab=99.50 E-value=4.6e-14 Score=85.32 Aligned_cols=93 Identities=14% Similarity=0.176 Sum_probs=80.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v 81 (106)
+..|+.|.+||++...++..... .-..+.++|+|..-. ++++++|..+..+|++. ..++..+.+|. +.|
T Consensus 206 ~~sDrsIvLyD~R~~~Pl~KVi~---~mRTN~IswnPeafn---F~~a~ED~nlY~~DmR~l~~p~~v~~dhv----sAV 275 (433)
T KOG0268|consen 206 CASDRSIVLYDLRQASPLKKVIL---TMRTNTICWNPEAFN---FVAANEDHNLYTYDMRNLSRPLNVHKDHV----SAV 275 (433)
T ss_pred eccCCceEEEecccCCccceeee---eccccceecCccccc---eeeccccccceehhhhhhcccchhhcccc----eeE
Confidence 34789999999999999877776 345678999993333 79999999999999987 45788888898 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.+++|||.|.-++|||.|.+|+||
T Consensus 276 ~dVdfsptG~EfvsgsyDksIRIf 299 (433)
T KOG0268|consen 276 MDVDFSPTGQEFVSGSYDKSIRIF 299 (433)
T ss_pred EEeccCCCcchhccccccceEEEe
Confidence 999999999999999999999997
No 92
>KOG0305|consensus
Probab=99.49 E-value=7.1e-13 Score=83.81 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=81.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..+|++|++||..+++.+..... .+.+..+.|++....... .-|..+..|.||++.+-+.+..+.+|. .+|.
T Consensus 364 Gs~D~~i~fwn~~~g~~i~~vdt---gsQVcsL~Wsk~~kEi~s-thG~s~n~i~lw~~ps~~~~~~l~gH~----~RVl 435 (484)
T KOG0305|consen 364 GSADRCIKFWNTNTGARIDSVDT---GSQVCSLIWSKKYKELLS-THGYSENQITLWKYPSMKLVAELLGHT----SRVL 435 (484)
T ss_pred CCcccEEEEEEcCCCcEeccccc---CCceeeEEEcCCCCEEEE-ecCCCCCcEEEEeccccceeeeecCCc----ceeE
Confidence 36899999999999998666655 456788999999877311 335667789999999988899999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++++|++..+++|+.|.++++|.
T Consensus 436 ~la~SPdg~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 436 YLALSPDGETIVTGAADETLRFWN 459 (484)
T ss_pred EEEECCCCCEEEEecccCcEEecc
Confidence 999999999999999999999995
No 93
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.49 E-value=8.1e-13 Score=77.65 Aligned_cols=93 Identities=22% Similarity=0.387 Sum_probs=77.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.|+.|.+||+.+++....+. .+...+..+.|.|.+.. +++++.++.+++||+++++.+..+..+. ..+.++
T Consensus 113 ~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~---l~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~i~~~ 183 (289)
T cd00200 113 RDKTIKVWDVETGKCLTTLR--GHTDWVNSVAFSPDGTF---VASSSQDGTIKLWDLRTGKCVATLTGHT----GEVNSV 183 (289)
T ss_pred CCCeEEEEECCCcEEEEEec--cCCCcEEEEEEcCcCCE---EEEEcCCCcEEEEEccccccceeEecCc----cccceE
Confidence 48999999999887755554 23445677888887554 6777779999999999888888888777 789999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|+|++..+++++.++.+++||
T Consensus 184 ~~~~~~~~l~~~~~~~~i~i~d 205 (289)
T cd00200 184 AFSPDGEKLLSSSSDGTIKLWD 205 (289)
T ss_pred EECCCcCEEEEecCCCcEEEEE
Confidence 9999999999999999999996
No 94
>KOG0306|consensus
Probab=99.47 E-value=4.3e-13 Score=87.26 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=85.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
+.+.+.|++|+..+.+++..+.+. .+.++.|.|.+.+ ++.|...|.+.+||+.....+.++++|. +.++
T Consensus 390 Sga~~SikiWn~~t~kciRTi~~~----y~l~~~Fvpgd~~---Iv~G~k~Gel~vfdlaS~~l~Eti~AHd----gaIW 458 (888)
T KOG0306|consen 390 SGAGESIKIWNRDTLKCIRTITCG----YILASKFVPGDRY---IVLGTKNGELQVFDLASASLVETIRAHD----GAIW 458 (888)
T ss_pred ecCCCcEEEEEccCcceeEEeccc----cEEEEEecCCCce---EEEeccCCceEEEEeehhhhhhhhhccc----ccee
Confidence 345688999999999998888873 6788999999988 8999999999999999999999999999 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++.+||+..+++||.|.+|++||
T Consensus 459 si~~~pD~~g~vT~saDktVkfWd 482 (888)
T KOG0306|consen 459 SISLSPDNKGFVTGSADKTVKFWD 482 (888)
T ss_pred eeeecCCCCceEEecCCcEEEEEe
Confidence 999999999999999999999997
No 95
>KOG0305|consensus
Probab=99.46 E-value=2.8e-13 Score=85.58 Aligned_cols=96 Identities=18% Similarity=0.174 Sum_probs=82.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+.|+.|..+|++..+.... ...+|...+..+.|.+++.. +++|+.|..+.|||.....++..+..|. ..|.
T Consensus 276 Gsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~---lASGgnDN~~~Iwd~~~~~p~~~~~~H~----aAVK 347 (484)
T KOG0305|consen 276 GSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQ---LASGGNDNVVFIWDGLSPEPKFTFTEHT----AAVK 347 (484)
T ss_pred ecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCe---eccCCCccceEeccCCCccccEEEeccc----eeee
Confidence 46799999999999888666 45556667777999999998 8999999999999998788888898898 9999
Q ss_pred EEEEcC-CCCEEEEec--CCCeEEEcC
Q psy17135 83 DVAFHP-SKPFIASAG--ADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~-~~~~~~s~~--~d~~i~iwd 106 (106)
+++|+| ....||+|+ .|++|++|+
T Consensus 348 A~awcP~q~~lLAsGGGs~D~~i~fwn 374 (484)
T KOG0305|consen 348 ALAWCPWQSGLLATGGGSADRCIKFWN 374 (484)
T ss_pred EeeeCCCccCceEEcCCCcccEEEEEE
Confidence 999999 556788866 789999996
No 96
>KOG0270|consensus
Probab=99.45 E-value=2.2e-13 Score=83.88 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=59.4
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
|...+..+.|+..-... |++|+.|.+|++||+.++++...+..|. ..|.++.|+| ...++++|+.|+++.+.|
T Consensus 242 HTdavl~Ls~n~~~~nV--LaSgsaD~TV~lWD~~~g~p~~s~~~~~----k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D 315 (463)
T KOG0270|consen 242 HTDAVLALSWNRNFRNV--LASGSADKTVKLWDVDTGKPKSSITHHG----KKVQTLEWHPYEPSVLLSGSYDGTVALKD 315 (463)
T ss_pred chHHHHHHHhcccccee--EEecCCCceEEEEEcCCCCcceehhhcC----CceeEEEecCCCceEEEeccccceEEeee
Confidence 33333446666554443 7999999999999999999999998777 8999999999 455699999999999876
No 97
>KOG0301|consensus
Probab=99.45 E-value=5.3e-13 Score=86.01 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=77.9
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+..+|.+|++|.- ++.+..+.. |++.+..+...+... +++++.||.|+.|++ +|.++..+.+|. ..+
T Consensus 156 TgsaDKtIklWk~--~~~l~tf~g--HtD~VRgL~vl~~~~----flScsNDg~Ir~w~~-~ge~l~~~~ght----n~v 222 (745)
T KOG0301|consen 156 TGSADKTIKLWKG--GTLLKTFSG--HTDCVRGLAVLDDSH----FLSCSNDGSIRLWDL-DGEVLLEMHGHT----NFV 222 (745)
T ss_pred eccCcceeeeccC--Cchhhhhcc--chhheeeeEEecCCC----eEeecCCceEEEEec-cCceeeeeeccc----eEE
Confidence 5678999999988 455456766 566666777777655 699999999999999 788898999999 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++++..+++..+++++.|+++++|+
T Consensus 223 Ysis~~~~~~~Ivs~gEDrtlriW~ 247 (745)
T KOG0301|consen 223 YSISMALSDGLIVSTGEDRTLRIWK 247 (745)
T ss_pred EEEEecCCCCeEEEecCCceEEEee
Confidence 9999888889999999999999995
No 98
>KOG0289|consensus
Probab=99.45 E-value=1.3e-12 Score=80.62 Aligned_cols=96 Identities=20% Similarity=0.306 Sum_probs=80.1
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+..+|+.|+|||++++..+.+|.. |.+.+..+.|.-.+-+ ++++..|+.|++||++.-+..+++..... ..+
T Consensus 364 tgt~d~~vkiwdlks~~~~a~Fpg--ht~~vk~i~FsENGY~---Lat~add~~V~lwDLRKl~n~kt~~l~~~---~~v 435 (506)
T KOG0289|consen 364 TGTPDGVVKIWDLKSQTNVAKFPG--HTGPVKAISFSENGYW---LATAADDGSVKLWDLRKLKNFKTIQLDEK---KEV 435 (506)
T ss_pred ccCCCceEEEEEcCCccccccCCC--CCCceeEEEeccCceE---EEEEecCCeEEEEEehhhcccceeecccc---ccc
Confidence 346899999999999998667776 5666777888777766 89999999999999999888888876653 579
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..+.|.+.|.+++.++.|=+|+++
T Consensus 436 ~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 436 NSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred eeEEEcCCCCeEEeecceeEEEEE
Confidence 999999999999999888777765
No 99
>KOG1539|consensus
Probab=99.45 E-value=3.6e-13 Score=88.23 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=84.0
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
|+...+|.+..||.+....+..... ......+.++..... ++.+..|-.|+++|..+.+.++.+.+|. +.
T Consensus 509 vsa~~~Gilkfw~f~~k~l~~~l~l---~~~~~~iv~hr~s~l---~a~~~ddf~I~vvD~~t~kvvR~f~gh~----nr 578 (910)
T KOG1539|consen 509 VSAGADGILKFWDFKKKVLKKSLRL---GSSITGIVYHRVSDL---LAIALDDFSIRVVDVVTRKVVREFWGHG----NR 578 (910)
T ss_pred EEccCcceEEEEecCCcceeeeecc---CCCcceeeeeehhhh---hhhhcCceeEEEEEchhhhhhHHhhccc----cc
Confidence 3556899999999999887666665 334667777887777 7888999999999999999999999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++++.|||||+++++++-|++|++||
T Consensus 579 itd~~FS~DgrWlisasmD~tIr~wD 604 (910)
T KOG1539|consen 579 ITDMTFSPDGRWLISASMDSTIRTWD 604 (910)
T ss_pred eeeeEeCCCCcEEEEeecCCcEEEEe
Confidence 99999999999999999999999998
No 100
>KOG0641|consensus
Probab=99.45 E-value=2.8e-12 Score=73.97 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=79.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCC-----CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSE-----PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
.+-|.+|++||++-..++..+....+..+ +..+...|.+.. +++|-.|....+||++.+..++.+..|.
T Consensus 200 gsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrl---l~sg~~dssc~lydirg~r~iq~f~phs--- 273 (350)
T KOG0641|consen 200 GSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRL---LASGHADSSCMLYDIRGGRMIQRFHPHS--- 273 (350)
T ss_pred cCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcce---eeeccCCCceEEEEeeCCceeeeeCCCc---
Confidence 45689999999998888776655443332 333455565555 8999999999999999999999998888
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.++.|+|...++.+|+.|..|++-|
T Consensus 274 -adir~vrfsp~a~yllt~syd~~ikltd 301 (350)
T KOG0641|consen 274 -ADIRCVRFSPGAHYLLTCSYDMKIKLTD 301 (350)
T ss_pred -cceeEEEeCCCceEEEEecccceEEEee
Confidence 8999999999999999999999998743
No 101
>KOG0308|consensus
Probab=99.45 E-value=9.5e-13 Score=84.48 Aligned_cols=91 Identities=18% Similarity=0.281 Sum_probs=79.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+.+++||.++.+.+.++. .|...+..+..++++.. +++++.|++|++||+...+|+.++..|. ..|+++
T Consensus 191 tek~lr~wDprt~~kimkLr--GHTdNVr~ll~~dDGt~---~ls~sSDgtIrlWdLgqQrCl~T~~vH~----e~VWaL 261 (735)
T KOG0308|consen 191 TEKDLRLWDPRTCKKIMKLR--GHTDNVRVLLVNDDGTR---LLSASSDGTIRLWDLGQQRCLATYIVHK----EGVWAL 261 (735)
T ss_pred cccceEEeccccccceeeee--ccccceEEEEEcCCCCe---EeecCCCceEEeeeccccceeeeEEecc----CceEEE
Confidence 45789999999999855555 46777778888888888 8999999999999999999999999999 789999
Q ss_pred EEcCCCCEEEEecCCCeEEE
Q psy17135 85 AFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~i 104 (106)
..+|+-..+.+|++|+.|..
T Consensus 262 ~~~~sf~~vYsG~rd~~i~~ 281 (735)
T KOG0308|consen 262 QSSPSFTHVYSGGRDGNIYR 281 (735)
T ss_pred eeCCCcceEEecCCCCcEEe
Confidence 99999999999999998764
No 102
>KOG0296|consensus
Probab=99.44 E-value=1.2e-12 Score=79.18 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=79.9
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
+|.|+||+..++.....+.. .-..+..+.|+|.... |+.|+.||.+-+|.+.++...+.+.+|. ..+++=.
T Consensus 127 sG~v~v~~~stg~~~~~~~~--e~~dieWl~WHp~a~i---llAG~~DGsvWmw~ip~~~~~kv~~Gh~----~~ct~G~ 197 (399)
T KOG0296|consen 127 SGKVLVFKVSTGGEQWKLDQ--EVEDIEWLKWHPRAHI---LLAGSTDGSVWMWQIPSQALCKVMSGHN----SPCTCGE 197 (399)
T ss_pred CccEEEEEcccCceEEEeec--ccCceEEEEecccccE---EEeecCCCcEEEEECCCcceeeEecCCC----CCccccc
Confidence 78999999999988555542 2345777899997776 8999999999999999887788899988 8999999
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.|+|+.++++..|++|++|+
T Consensus 198 f~pdGKr~~tgy~dgti~~Wn 218 (399)
T KOG0296|consen 198 FIPDGKRILTGYDDGTIIVWN 218 (399)
T ss_pred ccCCCceEEEEecCceEEEEe
Confidence 999999999999999999996
No 103
>KOG1273|consensus
Probab=99.43 E-value=6.9e-13 Score=79.28 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=65.3
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...+|.|++.+.. ++.|+.||.|-|||+.+....+.+.+|. ..|.+++||++|+.|.++++|..+.+||
T Consensus 25 ~a~~~~Fs~~G~~---lAvGc~nG~vvI~D~~T~~iar~lsaH~----~pi~sl~WS~dgr~LltsS~D~si~lwD 93 (405)
T KOG1273|consen 25 LAECCQFSRWGDY---LAVGCANGRVVIYDFDTFRIARMLSAHV----RPITSLCWSRDGRKLLTSSRDWSIKLWD 93 (405)
T ss_pred ccceEEeccCcce---eeeeccCCcEEEEEccccchhhhhhccc----cceeEEEecCCCCEeeeecCCceeEEEe
Confidence 3788999999998 8999999999999999999889999998 8999999999999999999999999997
No 104
>KOG1408|consensus
Probab=99.43 E-value=1.3e-12 Score=85.14 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=83.3
Q ss_pred CCceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-|..|+|||+.+++....|+..+.+ +....+...|.+.+ +++...|+++.++|.-+|.|+.+..+|. ..|+.
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY---~atScsdktl~~~Df~sgEcvA~m~GHs----E~VTG 688 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIY---LATSCSDKTLCFVDFVSGECVAQMTGHS----EAVTG 688 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEEEEECCCccE---EEEeecCCceEEEEeccchhhhhhcCcc----hheee
Confidence 3778999999999998888886544 33444666777766 8999999999999999999999999999 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|.+|.++|++.+.||+|.+|.
T Consensus 689 ~kF~nDCkHlISvsgDgCIFvW~ 711 (1080)
T KOG1408|consen 689 VKFLNDCKHLISVSGDGCIFVWK 711 (1080)
T ss_pred eeecccchhheeecCCceEEEEE
Confidence 99999999999999999999994
No 105
>KOG1188|consensus
Probab=99.43 E-value=1.2e-12 Score=78.67 Aligned_cols=98 Identities=18% Similarity=0.361 Sum_probs=68.9
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCC-CCCeeEeeeCCCCceEEEee----CCCCcEEEeeCCCccc-hheec-ccc
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNS-EPPACQTIPSSNISLFDSRP----GHDCSIRLWNLDNKTC-VQEIT-AHR 74 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~----~~d~~v~iwd~~~~~~-~~~~~-~~~ 74 (106)
++..||+|++||++..+...++....+.. ...++.-....+. +++| ..+-.|.+||++..+. ++.+. .|.
T Consensus 89 s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~i---i~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~ 165 (376)
T KOG1188|consen 89 SCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNI---IACGTELTRSDASVVLWDVRSEQQLLRQLNESHN 165 (376)
T ss_pred EeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCe---EEeccccccCceEEEEEEeccccchhhhhhhhcc
Confidence 45789999999999988766665543331 1222222222333 4555 3345689999998765 77764 566
Q ss_pred ccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
+.|+++.|+| +-..|+|||.||.+.+||
T Consensus 166 ----DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 166 ----DDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred ----CcceeEEecCCCCCeEEeecccceEEeee
Confidence 8999999999 556799999999999986
No 106
>KOG2111|consensus
Probab=99.43 E-value=2.7e-12 Score=76.55 Aligned_cols=96 Identities=17% Similarity=0.261 Sum_probs=77.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.-|+|+|-|+...+.-.+.....|.+.+.++.....+.. ++|+|..|+ |||||..+|..+..+.--.. ...+++
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~---vATaStkGTLIRIFdt~~g~~l~E~RRG~d--~A~iy~ 231 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTL---VATASTKGTLIRIFDTEDGTLLQELRRGVD--RADIYC 231 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccE---EEEeccCcEEEEEEEcCCCcEeeeeecCCc--hheEEE
Confidence 458899999976554334555567777777777777777 899999998 68999999999888853321 278999
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
++|||+..+++.+|..|++++|
T Consensus 232 iaFSp~~s~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 232 IAFSPNSSWLAVSSDKGTLHIF 253 (346)
T ss_pred EEeCCCccEEEEEcCCCeEEEE
Confidence 9999999999999999999987
No 107
>KOG0267|consensus
Probab=99.42 E-value=2.2e-13 Score=88.23 Aligned_cols=97 Identities=14% Similarity=0.315 Sum_probs=85.2
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
|...-|+-+.+||.+...+...+.. |...+..+.+.|.+.. ++++++|..+++||...|+.+..+..|+ ..
T Consensus 128 a~gStdtd~~iwD~Rk~Gc~~~~~s--~~~vv~~l~lsP~Gr~---v~~g~ed~tvki~d~~agk~~~ef~~~e----~~ 198 (825)
T KOG0267|consen 128 ASGSTDTDLKIWDIRKKGCSHTYKS--HTRVVDVLRLSPDGRW---VASGGEDNTVKIWDLTAGKLSKEFKSHE----GK 198 (825)
T ss_pred ccccccccceehhhhccCceeeecC--CcceeEEEeecCCCce---eeccCCcceeeeeccccccccccccccc----cc
Confidence 3456788999999998888777766 4445566788888888 8999999999999999999999999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..+.|+|....+++|+.|+++++||
T Consensus 199 v~sle~hp~e~Lla~Gs~d~tv~f~d 224 (825)
T KOG0267|consen 199 VQSLEFHPLEVLLAPGSSDRTVRFWD 224 (825)
T ss_pred ccccccCchhhhhccCCCCceeeeec
Confidence 99999999999999999999999997
No 108
>KOG1446|consensus
Probab=99.42 E-value=4e-12 Score=75.50 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=80.1
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
++..|.+++|||..+++.+......+ -++-.+.|......... .+...|.+|+..++.+.+.++.+.+|. ..|
T Consensus 31 tss~dDsl~LYd~~~g~~~~ti~skk--yG~~~~~Fth~~~~~i~-sStk~d~tIryLsl~dNkylRYF~GH~----~~V 103 (311)
T KOG1446|consen 31 TSSEDDSLRLYDSLSGKQVKTINSKK--YGVDLACFTHHSNTVIH-SSTKEDDTIRYLSLHDNKYLRYFPGHK----KRV 103 (311)
T ss_pred EecCCCeEEEEEcCCCceeeEeeccc--ccccEEEEecCCceEEE-ccCCCCCceEEEEeecCceEEEcCCCC----ceE
Confidence 45678899999999999977776643 23555666666655222 334558899999999999999999999 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..++.+|-+..++|++.|++|++||
T Consensus 104 ~sL~~sP~~d~FlS~S~D~tvrLWD 128 (311)
T KOG1446|consen 104 NSLSVSPKDDTFLSSSLDKTVRLWD 128 (311)
T ss_pred EEEEecCCCCeEEecccCCeEEeeE
Confidence 9999999889999999999999998
No 109
>KOG0270|consensus
Probab=99.41 E-value=4.1e-12 Score=78.42 Aligned_cols=95 Identities=12% Similarity=0.116 Sum_probs=74.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v 81 (106)
-+.|.+|++||+.++++ .....+|...+.++.|+|..... +++|+.|++|.+.|.+...+ -..+. -. +.|
T Consensus 262 gsaD~TV~lWD~~~g~p--~~s~~~~~k~Vq~l~wh~~~p~~--LLsGs~D~~V~l~D~R~~~~s~~~wk-~~----g~V 332 (463)
T KOG0270|consen 262 GSADKTVKLWDVDTGKP--KSSITHHGKKVQTLEWHPYEPSV--LLSGSYDGTVALKDCRDPSNSGKEWK-FD----GEV 332 (463)
T ss_pred cCCCceEEEEEcCCCCc--ceehhhcCCceeEEEecCCCceE--EEeccccceEEeeeccCccccCceEE-ec----cce
Confidence 46899999999999999 44444667778889999988775 89999999999999995332 22333 22 689
Q ss_pred EEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPS-KPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~-~~~~~s~~~d~~i~iwd 106 (106)
-.++|.|. ...++.+..||+++-+|
T Consensus 333 Ekv~w~~~se~~f~~~tddG~v~~~D 358 (463)
T KOG0270|consen 333 EKVAWDPHSENSFFVSTDDGTVYYFD 358 (463)
T ss_pred EEEEecCCCceeEEEecCCceEEeee
Confidence 99999984 45578888999998765
No 110
>KOG0268|consensus
Probab=99.40 E-value=6.2e-13 Score=80.55 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=73.4
Q ss_pred CCCceEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..|..++.+|++.... ...... |.+.+..+.|+|.+.. +++||.|.+|+||..+.+..-..+..... ..|+
T Consensus 248 ~ED~nlY~~DmR~l~~--p~~v~~dhvsAV~dVdfsptG~E---fvsgsyDksIRIf~~~~~~SRdiYhtkRM---q~V~ 319 (433)
T KOG0268|consen 248 NEDHNLYTYDMRNLSR--PLNVHKDHVSAVMDVDFSPTGQE---FVSGSYDKSIRIFPVNHGHSRDIYHTKRM---QHVF 319 (433)
T ss_pred cccccceehhhhhhcc--cchhhcccceeEEEeccCCCcch---hccccccceEEEeecCCCcchhhhhHhhh---heee
Confidence 4577788899887665 333322 3445666899999999 89999999999999987754333332332 6899
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.||.|.++++|||.|+.|++|.
T Consensus 320 ~Vk~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 320 CVKYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred EEEEeccccEEEecCCCcceeeee
Confidence 999999999999999999999994
No 111
>KOG2110|consensus
Probab=99.39 E-value=9.2e-12 Score=75.52 Aligned_cols=96 Identities=16% Similarity=0.262 Sum_probs=79.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|.|++||+.+.+....+. .|.+...++.|++.+.. ++|+++.|+ ||++++.+|+.+.+++--.. ...|.
T Consensus 150 ~t~GdV~l~d~~nl~~v~~I~--aH~~~lAalafs~~G~l---lATASeKGTVIRVf~v~~G~kl~eFRRG~~--~~~Iy 222 (391)
T KOG2110|consen 150 TTSGDVVLFDTINLQPVNTIN--AHKGPLAALAFSPDGTL---LATASEKGTVIRVFSVPEGQKLYEFRRGTY--PVSIY 222 (391)
T ss_pred CCCceEEEEEcccceeeeEEE--ecCCceeEEEECCCCCE---EEEeccCceEEEEEEcCCccEeeeeeCCce--eeEEE
Confidence 357899999999998855554 46666777899999988 999999998 57999999999888853221 26788
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|+..+|++.+..++|++|.
T Consensus 223 SL~Fs~ds~~L~~sS~TeTVHiFK 246 (391)
T KOG2110|consen 223 SLSFSPDSQFLAASSNTETVHIFK 246 (391)
T ss_pred EEEECCCCCeEEEecCCCeEEEEE
Confidence 999999999999999999999873
No 112
>KOG0300|consensus
Probab=99.38 E-value=2.4e-12 Score=77.36 Aligned_cols=93 Identities=19% Similarity=0.344 Sum_probs=77.4
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~ 82 (106)
+=|.+-.+||+.+++.+..+..+ .....-|..+|.... +++.+.|.+.++||.+.. +.+..+++|. +.|+
T Consensus 291 SWDRTAnlwDVEtge~v~~LtGH--d~ELtHcstHptQrL---VvTsSrDtTFRLWDFReaI~sV~VFQGHt----dtVT 361 (481)
T KOG0300|consen 291 SWDRTANLWDVETGEVVNILTGH--DSELTHCSTHPTQRL---VVTSSRDTTFRLWDFREAIQSVAVFQGHT----DTVT 361 (481)
T ss_pred eccccceeeeeccCceeccccCc--chhccccccCCcceE---EEEeccCceeEeccchhhcceeeeecccc----ccee
Confidence 34778899999999997777763 445666888887777 899999999999999854 4567889998 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.|..+ ..+++|+.|.+|++||
T Consensus 362 S~vF~~d-d~vVSgSDDrTvKvWd 384 (481)
T KOG0300|consen 362 SVVFNTD-DRVVSGSDDRTVKVWD 384 (481)
T ss_pred EEEEecC-CceeecCCCceEEEee
Confidence 9999875 4588999999999997
No 113
>KOG1332|consensus
Probab=99.38 E-value=7.7e-12 Score=72.58 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=71.8
Q ss_pred CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135 2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD 78 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~ 78 (106)
|+..|++|+|++.+.... .....+..|...+-.+.|-. ..++.+|++++.||.|-||...+++ .......|.
T Consensus 28 TcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wah-Pk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~---- 102 (299)
T KOG1332|consen 28 TCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAH-PKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHS---- 102 (299)
T ss_pred eecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecc-cccCcEeeEeecCceEEEEecCCCchhhhhhhhhhc----
Confidence 678999999999987554 22233333444444466633 3334448999999999999998884 345566677
Q ss_pred CCeEEEEEcC--CCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHP--SKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~--~~~~~~s~~~d~~i~iw 105 (106)
..|++++|-| .+..|+.++.||.|.+.
T Consensus 103 ~SVNsV~wapheygl~LacasSDG~vsvl 131 (299)
T KOG1332|consen 103 ASVNSVAWAPHEYGLLLACASSDGKVSVL 131 (299)
T ss_pred ccceeecccccccceEEEEeeCCCcEEEE
Confidence 8999999988 45578999999999875
No 114
>KOG0288|consensus
Probab=99.37 E-value=6.9e-12 Score=77.03 Aligned_cols=97 Identities=14% Similarity=0.179 Sum_probs=74.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-.|++|++||.++..+....+. .+.+.++..++.+.. +.+++.|.++.+.|+++......+.+..-+-....+.
T Consensus 319 H~DkkvRfwD~Rs~~~~~sv~~---gg~vtSl~ls~~g~~---lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtr 392 (459)
T KOG0288|consen 319 HFDKKVRFWDIRSADKTRSVPL---GGRVTSLDLSMDGLE---LLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTR 392 (459)
T ss_pred ccccceEEEeccCCceeeEeec---CcceeeEeeccCCeE---EeeecCCCceeeeecccccEEEEeeccccccccccce
Confidence 4588999999999888555544 235666766676666 7888999999999999887666665432111145778
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|||++.++++||.||.++||+
T Consensus 393 vvfSpd~~YvaAGS~dgsv~iW~ 415 (459)
T KOG0288|consen 393 VVFSPDGSYVAAGSADGSVYIWS 415 (459)
T ss_pred eEECCCCceeeeccCCCcEEEEE
Confidence 89999999999999999999995
No 115
>KOG2096|consensus
Probab=99.37 E-value=5.3e-12 Score=75.72 Aligned_cols=96 Identities=19% Similarity=0.273 Sum_probs=75.4
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---c-----cchheecc
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---K-----TCVQEITA 72 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~-----~~~~~~~~ 72 (106)
|+...|.+|.+|+++ |+.+...... +..-..+..+|.+.. +++++..--|++|.+-- | ....++.+
T Consensus 203 msas~dt~i~lw~lk-Gq~L~~idtn--q~~n~~aavSP~GRF---ia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG 276 (420)
T KOG2096|consen 203 MSASLDTKICLWDLK-GQLLQSIDTN--QSSNYDAAVSPDGRF---IAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG 276 (420)
T ss_pred EEecCCCcEEEEecC-Cceeeeeccc--cccccceeeCCCCcE---EEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence 678899999999999 7765555442 222344666777776 88899889999998542 2 22456778
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|. ..|..++|+++...+++.+.||+.++||
T Consensus 277 H~----saV~~~aFsn~S~r~vtvSkDG~wriwd 306 (420)
T KOG2096|consen 277 HQ----SAVLAAAFSNSSTRAVTVSKDGKWRIWD 306 (420)
T ss_pred ch----hheeeeeeCCCcceeEEEecCCcEEEee
Confidence 88 8999999999999999999999999997
No 116
>KOG1407|consensus
Probab=99.37 E-value=5.2e-12 Score=73.83 Aligned_cols=91 Identities=16% Similarity=0.225 Sum_probs=77.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..|+|.|......++ ......|...-.++.|.|.+.+ +++|+.|-.+.+||++.--|++.+..+. -.|..+
T Consensus 167 GlG~v~ILsypsLkp--v~si~AH~snCicI~f~p~Gry---fA~GsADAlvSLWD~~ELiC~R~isRld----wpVRTl 237 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKP--VQSIKAHPSNCICIEFDPDGRY---FATGSADALVSLWDVDELICERCISRLD----WPVRTL 237 (313)
T ss_pred CCceEEEEecccccc--ccccccCCcceEEEEECCCCce---EeeccccceeeccChhHhhhheeecccc----CceEEE
Confidence 457788888777776 4444556777788999999998 9999999999999999888999998887 899999
Q ss_pred EEcCCCCEEEEecCCCeEEE
Q psy17135 85 AFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~i 104 (106)
+||.+|++||+++.|..|-|
T Consensus 238 SFS~dg~~lASaSEDh~IDI 257 (313)
T KOG1407|consen 238 SFSHDGRMLASASEDHFIDI 257 (313)
T ss_pred EeccCcceeeccCccceEEe
Confidence 99999999999999987743
No 117
>KOG0301|consensus
Probab=99.37 E-value=7.6e-12 Score=80.85 Aligned_cols=91 Identities=24% Similarity=0.349 Sum_probs=70.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
.+.+||.|+.|++ +++++..... |+..+.++...+.+.. ++++++|+++++|+.. .+.+.+.-+. -.+
T Consensus 195 ScsNDg~Ir~w~~-~ge~l~~~~g--htn~vYsis~~~~~~~---Ivs~gEDrtlriW~~~--e~~q~I~lPt----tsi 262 (745)
T KOG0301|consen 195 SCSNDGSIRLWDL-DGEVLLEMHG--HTNFVYSISMALSDGL---IVSTGEDRTLRIWKKD--ECVQVITLPT----TSI 262 (745)
T ss_pred eecCCceEEEEec-cCceeeeeec--cceEEEEEEecCCCCe---EEEecCCceEEEeecC--ceEEEEecCc----cce
Confidence 5789999999999 6777555554 4555666665666666 8999999999999876 5666666444 689
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+++.+-+++. +++|+.||.||+|
T Consensus 263 Wsa~~L~NgD-Ivvg~SDG~VrVf 285 (745)
T KOG0301|consen 263 WSAKVLLNGD-IVVGGSDGRVRVF 285 (745)
T ss_pred EEEEEeeCCC-EEEeccCceEEEE
Confidence 9999887776 6677789999998
No 118
>KOG0293|consensus
Probab=99.36 E-value=6.7e-12 Score=77.35 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=78.1
Q ss_pred cCCCceEEEEeCccCceee-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYA-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...|.+..||++.....+. ...+..|...+..+.|+|++.+ +++|+.+..+.+||+.+|.+...+.... ...+
T Consensus 242 aSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdry---LlaCg~~e~~~lwDv~tgd~~~~y~~~~---~~S~ 315 (519)
T KOG0293|consen 242 ASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRY---LLACGFDEVLSLWDVDTGDLRHLYPSGL---GFSV 315 (519)
T ss_pred ccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCe---EEecCchHheeeccCCcchhhhhcccCc---CCCc
Confidence 4678899999987655422 2233334555667999999999 8999999999999999998777665432 1788
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+|.||+..+++|+.|+++..||
T Consensus 316 ~sc~W~pDg~~~V~Gs~dr~i~~wd 340 (519)
T KOG0293|consen 316 SSCAWCPDGFRFVTGSPDRTIIMWD 340 (519)
T ss_pred ceeEEccCCceeEecCCCCcEEEec
Confidence 9999999999999999999999996
No 119
>KOG0646|consensus
Probab=99.36 E-value=1.3e-11 Score=76.67 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=76.0
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----------------
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---------------- 65 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---------------- 65 (106)
+.+.|.++++||+..+..+..+..+ ....++...|.... +..|+++|.|.+.++.+-.
T Consensus 193 TaS~D~t~k~wdlS~g~LLlti~fp---~si~av~lDpae~~---~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t 266 (476)
T KOG0646|consen 193 TASEDRTIKLWDLSLGVLLLTITFP---SSIKAVALDPAERV---VYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENT 266 (476)
T ss_pred EecCCceEEEEEeccceeeEEEecC---CcceeEEEcccccE---EEecCCcceEEeeehhcCCcccccccccccccccc
Confidence 4567999999999999998877773 44666777777766 7899999999988765432
Q ss_pred chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
....+.+|.. +..|+|++++-|+..|++|+.||.+.+||
T Consensus 267 ~~~~~~Gh~~--~~~ITcLais~DgtlLlSGd~dg~VcvWd 305 (476)
T KOG0646|consen 267 QINVLVGHEN--ESAITCLAISTDGTLLLSGDEDGKVCVWD 305 (476)
T ss_pred eeeeeccccC--CcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence 1223445551 14999999999999999999999999997
No 120
>KOG0290|consensus
Probab=99.35 E-value=1.3e-11 Score=73.25 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=73.9
Q ss_pred CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---c-----
Q psy17135 2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---A----- 72 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~----- 72 (106)
+++=|.+..|||+.++.. ..+..+-.|...+..+.|...+... +++.+.||.||+||++.-.-...+. .
T Consensus 168 tSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~--FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pL 245 (364)
T KOG0290|consen 168 TSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDV--FASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPL 245 (364)
T ss_pred eecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccce--EEEecCCCcEEEEEecccccceEEecCCCCCCcc
Confidence 356689999999998732 1233444567778889998854443 6999999999999988532111000 0
Q ss_pred ------------------------------------ccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 73 ------------------------------------HRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ------------------------------------~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.-.+|++.|+.++|.| ....+++|+.|..+.+||
T Consensus 246 lRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWD 316 (364)
T KOG0290|consen 246 LRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWD 316 (364)
T ss_pred eeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEe
Confidence 0013668999999999 667899999999999997
No 121
>KOG1539|consensus
Probab=99.35 E-value=6.7e-12 Score=82.49 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=78.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|-.|+++|..+.+.++.+.. |...+....|+|++.. +++++.|++|++||+.++.++-.+... ..+..
T Consensus 553 ~ddf~I~vvD~~t~kvvR~f~g--h~nritd~~FS~DgrW---lisasmD~tIr~wDlpt~~lID~~~vd-----~~~~s 622 (910)
T KOG1539|consen 553 LDDFSIRVVDVVTRKVVREFWG--HGNRITDMTFSPDGRW---LISASMDSTIRTWDLPTGTLIDGLLVD-----SPCTS 622 (910)
T ss_pred cCceeEEEEEchhhhhhHHhhc--cccceeeeEeCCCCcE---EEEeecCCcEEEEeccCcceeeeEecC-----Cccee
Confidence 3567899999998887555554 5667888999999998 899999999999999999988877644 57899
Q ss_pred EEEcCCCCEEEEecCC-CeEEEc
Q psy17135 84 VAFHPSKPFIASAGAD-GLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d-~~i~iw 105 (106)
+.|+|++.+||+...| ..|++|
T Consensus 623 ls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 623 LSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred eEECCCCCEEEEEEecCceEEEE
Confidence 9999999999999998 678888
No 122
>KOG0639|consensus
Probab=99.34 E-value=3.1e-12 Score=80.61 Aligned_cols=93 Identities=14% Similarity=0.222 Sum_probs=78.3
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
.+-.||.|.|||+.++..+..+.. |.+++.++..++++.. |-||+-|.+||.||++.+..+.+..-. ..|
T Consensus 526 sccsdGnI~vwDLhnq~~VrqfqG--htDGascIdis~dGtk---lWTGGlDntvRcWDlregrqlqqhdF~-----SQI 595 (705)
T KOG0639|consen 526 SCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCIDISKDGTK---LWTGGLDNTVRCWDLREGRQLQQHDFS-----SQI 595 (705)
T ss_pred eeccCCcEEEEEcccceeeecccC--CCCCceeEEecCCCce---eecCCCccceeehhhhhhhhhhhhhhh-----hhh
Confidence 356799999999999998666655 5777888888888888 899999999999999998877666533 689
Q ss_pred EEEEEcCCCCEEEEecCCCeEEE
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
+++.++|.+.+++.|-.++.+.+
T Consensus 596 fSLg~cP~~dWlavGMens~vev 618 (705)
T KOG0639|consen 596 FSLGYCPTGDWLAVGMENSNVEV 618 (705)
T ss_pred eecccCCCccceeeecccCcEEE
Confidence 99999999999999998887654
No 123
>KOG2445|consensus
Probab=99.34 E-value=2e-11 Score=72.83 Aligned_cols=100 Identities=16% Similarity=0.228 Sum_probs=70.7
Q ss_pred CcCCCceEEEEeCccCce--eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---------chhee
Q psy17135 2 QKVPSSVIYIWTLLELQT--YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---------CVQEI 70 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---------~~~~~ 70 (106)
++..|++|+|||.+...- ...-....|.+.+..+.|-+ .+++.++++++.|+++.||.-.... ...++
T Consensus 30 tCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAh-PEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl 108 (361)
T KOG2445|consen 30 TCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAH-PEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTL 108 (361)
T ss_pred eccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecC-ccccceEEEEecCCceeeeeecccccccccceeEEEEEe
Confidence 678999999999754332 11233344566666677755 4455668999999999999763211 12234
Q ss_pred ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135 71 TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 71 ~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~iwd 106 (106)
.... ..|+.+.|.| -|-.+++++.||.+|||+
T Consensus 109 ~Dsr----ssV~DV~FaP~hlGLklA~~~aDG~lRIYE 142 (361)
T KOG2445|consen 109 VDSR----SSVTDVKFAPKHLGLKLAAASADGILRIYE 142 (361)
T ss_pred ecCC----cceeEEEecchhcceEEEEeccCcEEEEEe
Confidence 3444 7999999999 566799999999999985
No 124
>KOG1036|consensus
Probab=99.34 E-value=1.1e-11 Score=73.66 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=72.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
=||++++||...... +.... +......|.|.+... +++|+-||.|+.+|+.+++ ..++..|. ..+.++
T Consensus 33 WDgslrlYdv~~~~l--~~~~~-~~~plL~c~F~d~~~----~~~G~~dg~vr~~Dln~~~-~~~igth~----~~i~ci 100 (323)
T KOG1036|consen 33 WDGSLRLYDVPANSL--KLKFK-HGAPLLDCAFADEST----IVTGGLDGQVRRYDLNTGN-EDQIGTHD----EGIRCI 100 (323)
T ss_pred ccCcEEEEeccchhh--hhhee-cCCceeeeeccCCce----EEEeccCceEEEEEecCCc-ceeeccCC----CceEEE
Confidence 489999999998866 33332 233466688877444 5899999999999998876 34555677 899999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++....+++|+.|++|++||
T Consensus 101 ~~~~~~~~vIsgsWD~~ik~wD 122 (323)
T KOG1036|consen 101 EYSYEVGCVISGSWDKTIKFWD 122 (323)
T ss_pred EeeccCCeEEEcccCccEEEEe
Confidence 9999888899999999999997
No 125
>KOG0321|consensus
Probab=99.32 E-value=9.8e-12 Score=79.85 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=73.4
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--ch-----h---eec
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CV-----Q---EIT 71 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~-----~---~~~ 71 (106)
+...|.++++||+++.++........|...+.+..|.|..... |++|+.|+.+.|||++-.. .+ . ...
T Consensus 117 sasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~v--F~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n 194 (720)
T KOG0321|consen 117 SASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAV--FCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHN 194 (720)
T ss_pred EccCCceeeeeeeccceeecceeecccccccchhhhccCCCcc--eeeccCCCcEEEEEEeccchhhHHHHhhhhhcccc
Confidence 3568999999999998886664455567778888899988876 7999999999999987332 00 0 011
Q ss_pred c---cc----------ccCCCCeEE---EEEcCCCCEEEEecC-CCeEEEcC
Q psy17135 72 A---HR----------KKFDESILD---VAFHPSKPFIASAGA-DGLAKVFV 106 (106)
Q Consensus 72 ~---~~----------~~~~~~v~~---~~~~~~~~~~~s~~~-d~~i~iwd 106 (106)
. +. ..+...+.. +.+..|...||+++. |+.|++||
T Consensus 195 ~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWD 246 (720)
T KOG0321|consen 195 TAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWD 246 (720)
T ss_pred CCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence 1 00 001134444 566778889999887 99999998
No 126
>KOG0294|consensus
Probab=99.30 E-value=4.6e-11 Score=71.44 Aligned_cols=96 Identities=22% Similarity=0.265 Sum_probs=71.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCc------------------------------------eEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNIS------------------------------------LFD 47 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~ 47 (106)
..|+.+++||+-+|+.-...... + ....+.|.|.+... ..+
T Consensus 146 g~D~~lr~WNLV~Gr~a~v~~L~--~-~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L 222 (362)
T KOG0294|consen 146 GGDQVLRTWNLVRGRVAFVLNLK--N-KATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSEL 222 (362)
T ss_pred cCCceeeeehhhcCccceeeccC--C-cceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceE
Confidence 57899999999887763332221 1 22335555544421 114
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE--cCCCCEEEEecCCCeEEEcC
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF--HPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~~~d~~i~iwd 106 (106)
++|..|+.+++||.+...++..+.+|+ .+|-.+.+ .|++.+|++++.||.|++||
T Consensus 223 ~vG~d~~~i~~~D~ds~~~~~~~~AH~----~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd 279 (362)
T KOG0294|consen 223 LVGGDNEWISLKDTDSDTPLTEFLAHE----NRVKDIASYTNPEHEYLVTASSDGFIKVWD 279 (362)
T ss_pred EEecCCceEEEeccCCCccceeeecch----hheeeeEEEecCCceEEEEeccCceEEEEE
Confidence 788999999999999999999999999 88888874 56788999999999999997
No 127
>KOG1332|consensus
Probab=99.29 E-value=1.6e-11 Score=71.27 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=79.3
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheeccccccCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITAHRKKFD 78 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~ 78 (106)
.++.||+|.||.-.+++.........|...++++.|-|.+ ++..|++++.||.|.+.+.++. ...+...+|+
T Consensus 75 ScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphe-ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~---- 149 (299)
T KOG1332|consen 75 SCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHE-YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHE---- 149 (299)
T ss_pred EeecCceEEEEecCCCchhhhhhhhhhcccceeecccccc-cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccc----
Confidence 3678999999999998665555555577778889888865 4455699999999999988764 2345567788
Q ss_pred CCeEEEEEcCC---C-----------CEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPS---K-----------PFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~---~-----------~~~~s~~~d~~i~iwd 106 (106)
.+|+++.|.|. | ..|+||+-|..|++|+
T Consensus 150 ~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~ 191 (299)
T KOG1332|consen 150 IGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWK 191 (299)
T ss_pred cccceeeecCcCCCccccccCcccccceeeccCCccceeeee
Confidence 89999999985 3 3499999999999995
No 128
>KOG1446|consensus
Probab=99.29 E-value=6.7e-11 Score=70.41 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=75.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
-|.+|+..++.+.+.++-+.+ |...++.+..+|.+.. +++++.|++|++||++..+|...+.... -...
T Consensus 78 ~d~tIryLsl~dNkylRYF~G--H~~~V~sL~~sP~~d~---FlS~S~D~tvrLWDlR~~~cqg~l~~~~------~pi~ 146 (311)
T KOG1446|consen 78 EDDTIRYLSLHDNKYLRYFPG--HKKRVNSLSVSPKDDT---FLSSSLDKTVRLWDLRVKKCQGLLNLSG------RPIA 146 (311)
T ss_pred CCCceEEEEeecCceEEEcCC--CCceEEEEEecCCCCe---EEecccCCeEEeeEecCCCCceEEecCC------Ccce
Confidence 478999999999999888887 4556788999998877 8999999999999999877766664333 2456
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|.|+|-++|.+.....|++||
T Consensus 147 AfDp~GLifA~~~~~~~IkLyD 168 (311)
T KOG1446|consen 147 AFDPEGLIFALANGSELIKLYD 168 (311)
T ss_pred eECCCCcEEEEecCCCeEEEEE
Confidence 8999999999999888999986
No 129
>KOG1007|consensus
Probab=99.28 E-value=2.1e-11 Score=72.38 Aligned_cols=99 Identities=19% Similarity=0.377 Sum_probs=71.4
Q ss_pred CcCCCceEEEEeCccCceee-ecccCC---CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-ccccc
Q psy17135 2 QKVPSSVIYIWTLLELQTYA-RNDCPE---LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKK 76 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~ 76 (106)
.++.|+.|.+|++.....+. ...... +.....+..|+|...... +....|+++..||+++-++...+. +|.
T Consensus 139 asm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnq--v~tt~d~tl~~~D~RT~~~~~sI~dAHg-- 214 (370)
T KOG1007|consen 139 ASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQ--VATTSDSTLQFWDLRTMKKNNSIEDAHG-- 214 (370)
T ss_pred EEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccce--EEEeCCCcEEEEEccchhhhcchhhhhc--
Confidence 45779999999998765521 111111 233456678999654442 344457899999999877766664 454
Q ss_pred CCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
..|..+.|+|+..+ |++|+.|+.|++||
T Consensus 215 --q~vrdlDfNpnkq~~lvt~gDdgyvriWD 243 (370)
T KOG1007|consen 215 --QRVRDLDFNPNKQHILVTCGDDGYVRIWD 243 (370)
T ss_pred --ceeeeccCCCCceEEEEEcCCCccEEEEe
Confidence 78999999997765 89999999999997
No 130
>KOG1274|consensus
Probab=99.27 E-value=6.1e-11 Score=78.67 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=76.8
Q ss_pred cCCCceEEEEeCccCceeeecccCC-----CCCC-CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPE-----LNSE-PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 76 (106)
...||.|++||+.++.....+..-. .... .....|+|.+.. ++....|+.|++++..+......+.....
T Consensus 156 ss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~---la~~~~d~~Vkvy~r~~we~~f~Lr~~~~- 231 (933)
T KOG1274|consen 156 SSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGT---LAVPPVDNTVKVYSRKGWELQFKLRDKLS- 231 (933)
T ss_pred EecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCe---EEeeccCCeEEEEccCCceeheeeccccc-
Confidence 3579999999999988755443322 1122 234899999888 78888899999999998877766654321
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...+.++.|+|+|.+||++.-||.|.+||
T Consensus 232 -ss~~~~~~wsPnG~YiAAs~~~g~I~vWn 260 (933)
T KOG1274|consen 232 -SSKFSDLQWSPNGKYIAASTLDGQILVWN 260 (933)
T ss_pred -ccceEEEEEcCCCcEEeeeccCCcEEEEe
Confidence 14588999999999999999999999997
No 131
>KOG0299|consensus
Probab=99.27 E-value=2.8e-11 Score=75.16 Aligned_cols=95 Identities=13% Similarity=0.230 Sum_probs=76.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|..|.|||..+.+++..+.. |...+..+.|-..... +.+++.|+.+++|+++.-..+.++.+|+ +.|.
T Consensus 220 gg~d~~v~Iw~~~t~ehv~~~~g--hr~~V~~L~fr~gt~~---lys~s~Drsvkvw~~~~~s~vetlyGHq----d~v~ 290 (479)
T KOG0299|consen 220 GGRDRHVQIWDCDTLEHVKVFKG--HRGAVSSLAFRKGTSE---LYSASADRSVKVWSIDQLSYVETLYGHQ----DGVL 290 (479)
T ss_pred cCCCceEEEecCcccchhhcccc--cccceeeeeeecCccc---eeeeecCCceEEEehhHhHHHHHHhCCc----ccee
Confidence 45688899999999998666554 4555566666666666 7899999999999999888888999998 8888
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+....-++.+..|+.|+++++|+
T Consensus 291 ~IdaL~reR~vtVGgrDrT~rlwK 314 (479)
T KOG0299|consen 291 GIDALSRERCVTVGGRDRTVRLWK 314 (479)
T ss_pred eechhcccceEEeccccceeEEEe
Confidence 887776677777777888888885
No 132
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.27 E-value=1.1e-10 Score=66.94 Aligned_cols=87 Identities=14% Similarity=0.275 Sum_probs=63.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
++.|.+||++ ++.+..+. ......+.|+|.+.. ++.++ ..|.+.+||.++.+.+.... | ..+.
T Consensus 82 ~~~v~lyd~~-~~~i~~~~----~~~~n~i~wsP~G~~---l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-----~~~t 147 (194)
T PF08662_consen 82 PAKVTLYDVK-GKKIFSFG----TQPRNTISWSPDGRF---LVLAGFGNLNGDLEFWDVRKKKKISTFE-H-----SDAT 147 (194)
T ss_pred CcccEEEcCc-ccEeEeec----CCCceEEEECCCCCE---EEEEEccCCCcEEEEEECCCCEEeeccc-c-----CcEE
Confidence 4589999997 55433332 234567999999998 55554 34779999999877776553 3 4578
Q ss_pred EEEEcCCCCEEEEecC------CCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGA------DGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~------d~~i~iwd 106 (106)
.++|+|+|++++++.. |..++||+
T Consensus 148 ~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~ 177 (194)
T PF08662_consen 148 DVEWSPDGRYLATATTSPRLRVDNGFKIWS 177 (194)
T ss_pred EEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence 9999999999988774 56777774
No 133
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.26 E-value=1.4e-11 Score=52.91 Aligned_cols=38 Identities=34% Similarity=0.656 Sum_probs=35.2
Q ss_pred cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 65 TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 65 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++..+.+|. ..|.+++|+|++..+++++.|+.|++||
T Consensus 2 ~~~~~~~~h~----~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHS----SSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSS----SSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCC----CcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5677888898 8999999999999999999999999997
No 134
>KOG1408|consensus
Probab=99.26 E-value=1.4e-11 Score=80.52 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=60.0
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC---CCCEEEEecCCCeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP---SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~~~d~~i~iwd 106 (106)
++.++..+|.++. |++|..-|.++++++..-..+..+.+|+ ..|.|+.|+. ...+|+++++|+-|+++|
T Consensus 461 G~R~~~vSp~gqh---LAsGDr~GnlrVy~Lq~l~~~~~~eAHe----sEilcLeyS~p~~~~kLLASasrdRlIHV~D 532 (1080)
T KOG1408|consen 461 GFRALAVSPDGQH---LASGDRGGNLRVYDLQELEYTCFMEAHE----SEILCLEYSFPVLTNKLLASASRDRLIHVYD 532 (1080)
T ss_pred ceEEEEECCCcce---ecccCccCceEEEEehhhhhhhheeccc----ceeEEEeecCchhhhHhhhhccCCceEEEEe
Confidence 3556777888877 8999999999999999888888899999 8999999985 446799999999999987
No 135
>KOG0772|consensus
Probab=99.25 E-value=2.7e-11 Score=76.49 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=59.1
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheecccc-ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHR-KKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
|.....+..|+|..... ++|++.|+++++||+++.+. +..+.... ..-+-.+...+|++++..||+|+.||.|.+|
T Consensus 267 Hia~lt~g~whP~~k~~--FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W 344 (641)
T KOG0772|consen 267 HIAELTCGCWHPDNKEE--FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW 344 (641)
T ss_pred ceeeeeccccccCcccc--eEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence 55567778999998776 79999999999999987542 33332111 1112567788999999999999999999999
Q ss_pred C
Q psy17135 106 V 106 (106)
Q Consensus 106 d 106 (106)
+
T Consensus 345 ~ 345 (641)
T KOG0772|consen 345 D 345 (641)
T ss_pred e
Confidence 6
No 136
>KOG0321|consensus
Probab=99.25 E-value=1.4e-11 Score=79.09 Aligned_cols=96 Identities=15% Similarity=0.201 Sum_probs=74.9
Q ss_pred CCCceEEEEeCccCcee--e-e-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--eccccccC
Q psy17135 4 VPSSVIYIWTLLELQTY--A-R-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--ITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~ 77 (106)
..||.|.++|.+..... . . .....|...+..+.|.|-... |++++.|.++++||++++.+... +.+|.
T Consensus 71 dE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~---lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~--- 144 (720)
T KOG0321|consen 71 DEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESL---LVSASGDSTIRPWDVKTSRLVGGRLNLGHT--- 144 (720)
T ss_pred cCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCcee---EEEccCCceeeeeeeccceeecceeecccc---
Confidence 35889999998764431 0 1 222335555667899994444 89999999999999999887766 78888
Q ss_pred CCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..+-+++|+| +...|++|++||.+.|||
T Consensus 145 -~SvkS~cf~~~n~~vF~tGgRDg~illWD 173 (720)
T KOG0321|consen 145 -GSVKSECFMPTNPAVFCTGGRDGEILLWD 173 (720)
T ss_pred -cccchhhhccCCCcceeeccCCCcEEEEE
Confidence 8999999999 556799999999999997
No 137
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.24 E-value=2.5e-10 Score=68.44 Aligned_cols=94 Identities=12% Similarity=0.124 Sum_probs=70.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++.+..+.. ......+.|.|.+... +++++.++.+++||..+++.+..+..+. .+.
T Consensus 7 ~~~d~~v~~~d~~t~~~~~~~~~---~~~~~~l~~~~dg~~l--~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~ 76 (300)
T TIGR03866 7 NEKDNTISVIDTATLEVTRTFPV---GQRPRGITLSKDGKLL--YVCASDSDTIQVIDLATGEVIGTLPSGP-----DPE 76 (300)
T ss_pred ecCCCEEEEEECCCCceEEEEEC---CCCCCceEECCCCCEE--EEEECCCCeEEEEECCCCcEEEeccCCC-----Ccc
Confidence 45789999999999887665543 2234568888887652 4677888999999999888766665443 356
Q ss_pred EEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIA-SAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~-s~~~d~~i~iwd 106 (106)
.+.++|++..++ +++.++.+++||
T Consensus 77 ~~~~~~~g~~l~~~~~~~~~l~~~d 101 (300)
T TIGR03866 77 LFALHPNGKILYIANEDDNLVTVID 101 (300)
T ss_pred EEEECCCCCEEEEEcCCCCeEEEEE
Confidence 788999998764 556688999986
No 138
>KOG1036|consensus
Probab=99.24 E-value=1.7e-10 Score=68.65 Aligned_cols=90 Identities=9% Similarity=0.059 Sum_probs=70.2
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.-||.|+.+|+.++.. .....|...+.++.+.+.... +++|+.|++|++||.++..+...+... ..|.+
T Consensus 72 ~~dg~vr~~Dln~~~~---~~igth~~~i~ci~~~~~~~~---vIsgsWD~~ik~wD~R~~~~~~~~d~~-----kkVy~ 140 (323)
T KOG1036|consen 72 GLDGQVRRYDLNTGNE---DQIGTHDEGIRCIEYSYEVGC---VISGSWDKTIKFWDPRNKVVVGTFDQG-----KKVYC 140 (323)
T ss_pred ccCceEEEEEecCCcc---eeeccCCCceEEEEeeccCCe---EEEcccCccEEEEeccccccccccccC-----ceEEE
Confidence 4589999999999885 333345666777888877777 899999999999999985555444432 47787
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..+ +..|+.|+.++.+.+||
T Consensus 141 ~~v~--g~~LvVg~~~r~v~iyD 161 (323)
T KOG1036|consen 141 MDVS--GNRLVVGTSDRKVLIYD 161 (323)
T ss_pred Eecc--CCEEEEeecCceEEEEE
Confidence 7664 67899999999999997
No 139
>KOG0278|consensus
Probab=99.23 E-value=8e-11 Score=68.80 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=47.8
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.++..++.+.. ++....+.|+.||.++-..++.+..+ ..|.+.+++|+...++.|+.|..++-||
T Consensus 186 ~VtSlEvs~dG~i----lTia~gssV~Fwdaksf~~lKs~k~P-----~nV~SASL~P~k~~fVaGged~~~~kfD 252 (334)
T KOG0278|consen 186 PVTSLEVSQDGRI----LTIAYGSSVKFWDAKSFGLLKSYKMP-----CNVESASLHPKKEFFVAGGEDFKVYKFD 252 (334)
T ss_pred CCcceeeccCCCE----EEEecCceeEEeccccccceeeccCc-----cccccccccCCCceEEecCcceEEEEEe
Confidence 3444555554443 55566677888888776666666544 4788888999998999999999988776
No 140
>KOG4378|consensus
Probab=99.22 E-value=1.3e-10 Score=73.36 Aligned_cols=95 Identities=12% Similarity=0.220 Sum_probs=77.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..+|.|.+||+....+...+... |......+.|+|..+.. +++.+.|..|.+||....+....+... .....
T Consensus 184 sd~G~VtlwDv~g~sp~~~~~~~-HsAP~~gicfspsne~l--~vsVG~Dkki~~yD~~s~~s~~~l~y~-----~Plst 255 (673)
T KOG4378|consen 184 SDKGAVTLWDVQGMSPIFHASEA-HSAPCRGICFSPSNEAL--LVSVGYDKKINIYDIRSQASTDRLTYS-----HPLST 255 (673)
T ss_pred ccCCeEEEEeccCCCcccchhhh-ccCCcCcceecCCccce--EEEecccceEEEeecccccccceeeec-----CCcce
Confidence 57899999999988875555443 33445558899988886 899999999999999877666666533 47789
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+++|.+|+.|...|.+..||
T Consensus 256 vaf~~~G~~L~aG~s~G~~i~YD 278 (673)
T KOG4378|consen 256 VAFSECGTYLCAGNSKGELIAYD 278 (673)
T ss_pred eeecCCceEEEeecCCceEEEEe
Confidence 99999999999999999998886
No 141
>KOG0642|consensus
Probab=99.22 E-value=4.6e-11 Score=75.72 Aligned_cols=98 Identities=15% Similarity=0.231 Sum_probs=71.3
Q ss_pred CcCCCceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------c
Q psy17135 2 QKVPSSVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----------T 65 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----------~ 65 (106)
+..-||+|.+|+++. ......+....|...+.++...+.+.. +.+|+-||+|+.|++... .
T Consensus 311 t~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~---~ysgg~Dg~I~~w~~p~n~dp~ds~dp~v 387 (577)
T KOG0642|consen 311 TASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEH---CYSGGIDGTIRCWNLPPNQDPDDSYDPSV 387 (577)
T ss_pred EeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceE---EEeeccCceeeeeccCCCCCcccccCcch
Confidence 456799999999932 111223344446655556666666666 789999999999965421 1
Q ss_pred chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...++.+|. +.++.+++|+....|++|+.||++++|+
T Consensus 388 l~~~l~Ght----davw~l~~s~~~~~Llscs~DgTvr~w~ 424 (577)
T KOG0642|consen 388 LSGTLLGHT----DAVWLLALSSTKDRLLSCSSDGTVRLWE 424 (577)
T ss_pred hccceeccc----cceeeeeecccccceeeecCCceEEeec
Confidence 234566777 8999999999888899999999999995
No 142
>KOG0303|consensus
Probab=99.22 E-value=1.3e-10 Score=71.36 Aligned_cols=96 Identities=13% Similarity=0.083 Sum_probs=74.3
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|++|.+||+.+++.+..+. |.+-+.++.|+..+.. ++|.+.|+.|++||.++++.+..-.+|++ ..-
T Consensus 149 sag~Dn~v~iWnv~tgeali~l~---hpd~i~S~sfn~dGs~---l~TtckDKkvRv~dpr~~~~v~e~~~heG---~k~ 219 (472)
T KOG0303|consen 149 SAGSDNTVSIWNVGTGEALITLD---HPDMVYSMSFNRDGSL---LCTTCKDKKVRVIDPRRGTVVSEGVAHEG---AKP 219 (472)
T ss_pred hccCCceEEEEeccCCceeeecC---CCCeEEEEEeccCCce---eeeecccceeEEEcCCCCcEeeecccccC---CCc
Confidence 45689999999999999866554 5666778999999988 89999999999999999998887777773 344
Q ss_pred EEEEEcCCCCEEEEec---CCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAG---ADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~---~d~~i~iwd 106 (106)
..+-|-.++..+.+|. .++.+-+||
T Consensus 220 ~Raifl~~g~i~tTGfsr~seRq~aLwd 247 (472)
T KOG0303|consen 220 ARAIFLASGKIFTTGFSRMSERQIALWD 247 (472)
T ss_pred ceeEEeccCceeeeccccccccceeccC
Confidence 4455666777554443 556777776
No 143
>KOG0646|consensus
Probab=99.22 E-value=4.1e-11 Score=74.50 Aligned_cols=90 Identities=17% Similarity=0.241 Sum_probs=70.4
Q ss_pred ceEEEEeCccCceee-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 7 SVIYIWTLLELQTYA-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
..|.+|.+.....+. .... ...+.++...|.+.. ++.|...+.+.+|.+.+|..+..+.+|- ..|+++.
T Consensus 61 p~l~vw~i~k~~~~~q~~v~---Pg~v~al~s~n~G~~---l~ag~i~g~lYlWelssG~LL~v~~aHY----Q~ITcL~ 130 (476)
T KOG0646|consen 61 PLLHVWEILKKDQVVQYIVL---PGPVHALASSNLGYF---LLAGTISGNLYLWELSSGILLNVLSAHY----QSITCLK 130 (476)
T ss_pred ccccccccCchhhhhhhccc---ccceeeeecCCCceE---EEeecccCcEEEEEeccccHHHHHHhhc----cceeEEE
Confidence 467888887655533 2222 223344444454444 7778799999999999999999999998 8999999
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
|+-|+.+++|||.||.|.+|+
T Consensus 131 fs~dgs~iiTgskDg~V~vW~ 151 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWL 151 (476)
T ss_pred EeCCCcEEEecCCCccEEEEE
Confidence 999999999999999999994
No 144
>KOG0299|consensus
Probab=99.21 E-value=1.4e-10 Score=72.07 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=78.3
Q ss_pred cCCCceEEEEeCccCcee----ee----------cccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135 3 KVPSSVIYIWTLLELQTY----AR----------NDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~----~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
...|++|.=|++.+++.. .+ .... .|.....+++.++++.+ +++|+.|..+.||+.++...
T Consensus 160 ask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky---latgg~d~~v~Iw~~~t~eh 236 (479)
T KOG0299|consen 160 ASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY---LATGGRDRHVQIWDCDTLEH 236 (479)
T ss_pred cCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE---EEecCCCceEEEecCcccch
Confidence 467889999999887742 01 0111 23445566777777777 99999999999999999999
Q ss_pred hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 67 VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+.+|. +.|.+++|......+.+++.|+.+++|+
T Consensus 237 v~~~~ghr----~~V~~L~fr~gt~~lys~s~Drsvkvw~ 272 (479)
T KOG0299|consen 237 VKVFKGHR----GAVSSLAFRKGTSELYSASADRSVKVWS 272 (479)
T ss_pred hhcccccc----cceeeeeeecCccceeeeecCCceEEEe
Confidence 99999999 8999999998878899999999999995
No 145
>KOG0973|consensus
Probab=99.21 E-value=8e-11 Score=78.90 Aligned_cols=96 Identities=16% Similarity=0.308 Sum_probs=72.7
Q ss_pred CCCceEEEEeCccCc----e----eeec--ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-------c--
Q psy17135 4 VPSSVIYIWTLLELQ----T----YARN--DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-------K-- 64 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~----~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-------~-- 64 (106)
+.|+.++||+...-- . +.+. ....|.+.+.++.|.|++.+ |++|+.|+.|.+|+... |
T Consensus 34 ~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~---lAsGSDD~~v~iW~~~~~~~~~~fgs~ 110 (942)
T KOG0973|consen 34 VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSY---LASGSDDRLVMIWERAEIGSGTVFGST 110 (942)
T ss_pred cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCe---EeeccCcceEEEeeecccCCccccccc
Confidence 368888899985311 0 1122 12225566777889999999 99999999999998773 0
Q ss_pred ---------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 65 ---------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 65 ---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++...+.+|. ..|..+.|+|++.++++++-|++|.+|+
T Consensus 111 g~~~~vE~wk~~~~l~~H~----~DV~Dv~Wsp~~~~lvS~s~DnsViiwn 157 (942)
T KOG0973|consen 111 GGAKNVESWKVVSILRGHD----SDVLDVNWSPDDSLLVSVSLDNSVIIWN 157 (942)
T ss_pred ccccccceeeEEEEEecCC----CccceeccCCCccEEEEecccceEEEEc
Confidence 1344566676 8999999999999999999999999996
No 146
>KOG2110|consensus
Probab=99.21 E-value=3.4e-10 Score=68.89 Aligned_cols=94 Identities=21% Similarity=0.385 Sum_probs=70.2
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEE-EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFD-SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
+.|.|||+++.+.++....-..+ ....+++++......+. -.....|.|.+||..+-+....+.+|. +.+-+++
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n-~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~----~~lAala 180 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPN-PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK----GPLAALA 180 (391)
T ss_pred ccEEEEecccceeehhhhccCCC-ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC----CceeEEE
Confidence 35999999999997776653222 23345566655432111 223345889999999999999999999 8999999
Q ss_pred EcCCCCEEEEecCCCeE-EEc
Q psy17135 86 FHPSKPFIASAGADGLA-KVF 105 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i-~iw 105 (106)
|+++|..+|+++..|+| |+|
T Consensus 181 fs~~G~llATASeKGTVIRVf 201 (391)
T KOG2110|consen 181 FSPDGTLLATASEKGTVIRVF 201 (391)
T ss_pred ECCCCCEEEEeccCceEEEEE
Confidence 99999999999999984 444
No 147
>KOG0307|consensus
Probab=99.20 E-value=5.1e-11 Score=80.31 Aligned_cols=97 Identities=20% Similarity=0.308 Sum_probs=74.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC---CcEEEeeCCCc-cchheeccccccCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD---CSIRLWNLDNK-TCVQEITAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d---~~v~iwd~~~~-~~~~~~~~~~~~~~~ 79 (106)
.++|.+.|||++..+.+..+.-.-.......+.|+|......+ +++.| -.|.+||++.. .+++.++.|. .
T Consensus 181 s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~--~As~dd~~PviqlWDlR~assP~k~~~~H~----~ 254 (1049)
T KOG0307|consen 181 SPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL--VASGDDSAPVIQLWDLRFASSPLKILEGHQ----R 254 (1049)
T ss_pred CCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee--eecCCCCCceeEeecccccCCchhhhcccc----c
Confidence 4678999999998887555544222233456999999888744 44433 34889999974 5788888998 8
Q ss_pred CeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
+|.++.|++.+ .+++|++.|++|..|+
T Consensus 255 GilslsWc~~D~~lllSsgkD~~ii~wN 282 (1049)
T KOG0307|consen 255 GILSLSWCPQDPRLLLSSGKDNRIICWN 282 (1049)
T ss_pred ceeeeccCCCCchhhhcccCCCCeeEec
Confidence 99999999954 7899999999999995
No 148
>KOG0973|consensus
Probab=99.20 E-value=1.2e-10 Score=78.03 Aligned_cols=96 Identities=18% Similarity=0.298 Sum_probs=79.5
Q ss_pred CCCceEEEEeCccC----------ce-----e-eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch
Q psy17135 4 VPSSVIYIWTLLEL----------QT-----Y-ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV 67 (106)
Q Consensus 4 ~~d~~i~iwd~~~~----------~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~ 67 (106)
..|..|.||+.... .. . .......|...+..+.|.|.+.. +++++.|++|-+|+..+...+
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~---lvS~s~DnsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL---LVSVSLDNSVIIWNAKTFELL 164 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE---EEEecccceEEEEccccceee
Confidence 56888999998730 00 0 01112226677888999998888 899999999999999999999
Q ss_pred heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 68 QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 68 ~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+.+|. ..|-.+.|.|-|+++|+-+.|+++++|+
T Consensus 165 ~vl~~H~----s~VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 165 KVLRGHQ----SLVKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred eeeeccc----ccccceEECCccCeeeeecCCceEEEEE
Confidence 9999999 8999999999999999999999999995
No 149
>KOG2394|consensus
Probab=99.18 E-value=1.3e-10 Score=73.75 Aligned_cols=71 Identities=17% Similarity=0.322 Sum_probs=62.5
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...+....|+|++.. |++.+.||.+||||..+-..+..+...- +...|+.||||+++|++|++|.-|.+|.
T Consensus 290 ~g~in~f~FS~DG~~---LA~VSqDGfLRvF~fdt~eLlg~mkSYF----GGLLCvcWSPDGKyIvtGGEDDLVtVwS 360 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKY---LATVSQDGFLRIFDFDTQELLGVMKSYF----GGLLCVCWSPDGKYIVTGGEDDLVTVWS 360 (636)
T ss_pred cccccceeEcCCCce---EEEEecCceEEEeeccHHHHHHHHHhhc----cceEEEEEcCCccEEEecCCcceEEEEE
Confidence 345666788887777 9999999999999999888877777777 8999999999999999999999999984
No 150
>KOG1009|consensus
Probab=99.17 E-value=1.2e-10 Score=71.48 Aligned_cols=98 Identities=16% Similarity=0.305 Sum_probs=75.0
Q ss_pred CcCCCceEEEEeCccCce-------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------
Q psy17135 2 QKVPSSVIYIWTLLELQT-------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---------- 64 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---------- 64 (106)
+...|..|+||-+..... ...-.+..|+..++.+.|+|.+.. +++|+.+|.+.+|-...-
T Consensus 31 T~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gel---LASg~D~g~v~lWk~~~~~~~~~d~e~~ 107 (434)
T KOG1009|consen 31 TAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGEL---LASGGDGGEVFLWKQGDVRIFDADTEAD 107 (434)
T ss_pred cccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCe---eeecCCCceEEEEEecCcCCccccchhh
Confidence 356789999999875333 112233346667888999999998 899999999999976511
Q ss_pred ------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 65 ------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 65 ------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...+.+.+|. ..+..++|+|++..+++++-|..+++||
T Consensus 108 ~~ke~w~v~k~lr~h~----~diydL~Ws~d~~~l~s~s~dns~~l~D 151 (434)
T KOG1009|consen 108 LNKEKWVVKKVLRGHR----DDIYDLAWSPDSNFLVSGSVDNSVRLWD 151 (434)
T ss_pred hCccceEEEEEecccc----cchhhhhccCCCceeeeeeccceEEEEE
Confidence 1122344555 8999999999999999999999999997
No 151
>KOG0644|consensus
Probab=99.15 E-value=4.2e-11 Score=79.26 Aligned_cols=93 Identities=18% Similarity=0.352 Sum_probs=75.0
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
++.++|..++||.+.+..++..... |.+.+....... .+.. +++++.|..|++|-+..+.++..+.+|. +.
T Consensus 206 itgsdd~lvKiwS~et~~~lAs~rG--hs~ditdlavs~-~n~~--iaaaS~D~vIrvWrl~~~~pvsvLrght----ga 276 (1113)
T KOG0644|consen 206 ITGSDDRLVKIWSMETARCLASCRG--HSGDITDLAVSS-NNTM--IAAASNDKVIRVWRLPDGAPVSVLRGHT----GA 276 (1113)
T ss_pred eecCccceeeeeeccchhhhccCCC--Cccccchhccch-hhhh--hhhcccCceEEEEecCCCchHHHHhccc----cc
Confidence 3567899999999999998544444 455454444333 3333 7899999999999999999999999999 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|++++|+|-. +.+.||++++||
T Consensus 277 vtaiafsP~~----sss~dgt~~~wd 298 (1113)
T KOG0644|consen 277 VTAIAFSPRA----SSSDDGTCRIWD 298 (1113)
T ss_pred eeeeccCccc----cCCCCCceEecc
Confidence 9999999954 788999999997
No 152
>KOG0647|consensus
Probab=99.15 E-value=2.9e-10 Score=67.80 Aligned_cols=72 Identities=22% Similarity=0.351 Sum_probs=57.6
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccch-heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCV-QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+..+.|+|..... ++.++.|++||+|+++. |... +....|. ..+.+++|+.+|..+++|+.|+.+++||
T Consensus 27 ~DsIS~l~FSP~~~~~--~~A~SWD~tVR~wevq~~g~~~~ka~~~~~----~PvL~v~WsddgskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADNL--LAAGSWDGTVRIWEVQNSGQLVPKAQQSHD----GPVLDVCWSDDGSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCce--EEecccCCceEEEEEecCCcccchhhhccC----CCeEEEEEccCCceEEeeccCCceEEEE
Confidence 3446679999954442 67999999999999987 3332 3334455 8999999999999999999999999997
No 153
>KOG1445|consensus
Probab=99.14 E-value=3e-10 Score=73.79 Aligned_cols=98 Identities=13% Similarity=0.179 Sum_probs=77.0
Q ss_pred CcCCCceEEEEeCccCceeee----cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 2 QKVPSSVIYIWTLLELQTYAR----NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
+++.|..|+||.+..+-.... ....+.+..+-++.|+|.... +...+..|.+++||+.+++.+..+.+|.
T Consensus 97 T~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDg---il~s~a~g~v~i~D~stqk~~~el~~h~--- 170 (1012)
T KOG1445|consen 97 TCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADG---ILASGAHGSVYITDISTQKTAVELSGHT--- 170 (1012)
T ss_pred cccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCc---eEEeccCceEEEEEcccCceeecccCCc---
Confidence 578999999999984322111 112223334556788887766 5556667899999999999999999998
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|.+..|+.||..+++++.|..|+|||
T Consensus 171 -d~vQSa~WseDG~llatscKdkqirifD 198 (1012)
T KOG1445|consen 171 -DKVQSADWSEDGKLLATSCKDKQIRIFD 198 (1012)
T ss_pred -hhhhccccccCCceEeeecCCcceEEeC
Confidence 8999999999999999999999999997
No 154
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.13 E-value=2e-09 Score=64.57 Aligned_cols=96 Identities=7% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCCceEEEEeCccCceeeecccCCC-----CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPEL-----NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
..++.|++||+.+++.+..+..... ......+.++|.+... +++...+..+.+||.++++....+. +.
T Consensus 176 ~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~--~~~~~~~~~i~v~d~~~~~~~~~~~-~~---- 248 (300)
T TIGR03866 176 EIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA--FVALGPANRVAVVDAKTYEVLDYLL-VG---- 248 (300)
T ss_pred CCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE--EEEcCCCCeEEEEECCCCcEEEEEE-eC----
Confidence 3578999999999887555432210 1112346678877763 3444556679999998887665543 33
Q ss_pred CCeEEEEEcCCCCEEEEe-cCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASA-GADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~-~~d~~i~iwd 106 (106)
..+.+++|+|++..++++ +.++.|.+||
T Consensus 249 ~~~~~~~~~~~g~~l~~~~~~~~~i~v~d 277 (300)
T TIGR03866 249 QRVWQLAFTPDEKYLLTTNGVSNDVSVID 277 (300)
T ss_pred CCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence 568899999999998776 5689999997
No 155
>KOG0649|consensus
Probab=99.13 E-value=3.2e-10 Score=66.12 Aligned_cols=97 Identities=22% Similarity=0.188 Sum_probs=69.5
Q ss_pred cCCCceEEEEeCccCce------eeecccCCCC-----CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 3 KVPSSVIYIWTLLELQT------YARNDCPELN-----SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
+-.||.|+-|.-+.... +.....+.+. ..++.+...|..+. +..++-|+.+..||+++|+..+.+.
T Consensus 77 s~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS---i~~AgGD~~~y~~dlE~G~i~r~~r 153 (325)
T KOG0649|consen 77 SGGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS---ILFAGGDGVIYQVDLEDGRIQREYR 153 (325)
T ss_pred eccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc---EEEecCCeEEEEEEecCCEEEEEEc
Confidence 45678888887654222 1111111111 23445555566665 5666689999999999999999999
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|. +.+.++........+.||+.||++|+||
T Consensus 154 GHt----DYvH~vv~R~~~~qilsG~EDGtvRvWd 184 (325)
T KOG0649|consen 154 GHT----DYVHSVVGRNANGQILSGAEDGTVRVWD 184 (325)
T ss_pred CCc----ceeeeeeecccCcceeecCCCccEEEEe
Confidence 999 8999998866666799999999999997
No 156
>KOG2048|consensus
Probab=99.12 E-value=1.1e-09 Score=70.88 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=74.7
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...-+|+|.-||+.++++....... ...+-+++.+|.+.. ++.|+.||.+..++...++....- .-+++++++
T Consensus 85 S~g~sg~i~EwDl~~lk~~~~~d~~--gg~IWsiai~p~~~~---l~IgcddGvl~~~s~~p~~I~~~r--~l~rq~sRv 157 (691)
T KOG2048|consen 85 SSGLSGSITEWDLHTLKQKYNIDSN--GGAIWSIAINPENTI---LAIGCDDGVLYDFSIGPDKITYKR--SLMRQKSRV 157 (691)
T ss_pred eecCCceEEEEecccCceeEEecCC--CcceeEEEeCCccce---EEeecCCceEEEEecCCceEEEEe--ecccccceE
Confidence 4567899999999999986666652 223444667777766 788999998888888777643221 112223899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++|+|++..+++|+.||.|++||
T Consensus 158 Lslsw~~~~~~i~~Gs~Dg~Iriwd 182 (691)
T KOG2048|consen 158 LSLSWNPTGTKIAGGSIDGVIRIWD 182 (691)
T ss_pred EEEEecCCccEEEecccCceEEEEE
Confidence 9999999999999999999999997
No 157
>KOG0300|consensus
Probab=99.11 E-value=2.8e-10 Score=68.66 Aligned_cols=72 Identities=21% Similarity=0.364 Sum_probs=60.1
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.+++-.+......+. +.+++.|.+.+||.++++.|+.++.+|. +.|++++|++.+.++++++.|++..||.
T Consensus 147 HkDGiW~Vaa~~tqpi---~gtASADhTA~iWs~Esg~CL~~Y~GH~----GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 147 HKDGIWHVAADSTQPI---CGTASADHTARIWSLESGACLATYTGHT----GSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred cccceeeehhhcCCcc---eeecccccceeEEeeccccceeeecccc----cceeeEEeccccceEEEccCCcchHHHH
Confidence 4444433433333333 7999999999999999999999999999 8999999999999999999999999983
No 158
>KOG4328|consensus
Probab=99.11 E-value=4.7e-10 Score=69.91 Aligned_cols=92 Identities=16% Similarity=0.180 Sum_probs=69.4
Q ss_pred ceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch----heeccccccCCCCe
Q psy17135 7 SVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV----QEITAHRKKFDESI 81 (106)
Q Consensus 7 ~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~~v 81 (106)
|...+||++++.. ...... |...+..+.++|..... ++|++-|++++|||++.-... -....|. ..|
T Consensus 301 G~f~~iD~R~~~s~~~~~~l--h~kKI~sv~~NP~~p~~--laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hr----rsV 372 (498)
T KOG4328|consen 301 GNFNVIDLRTDGSEYENLRL--HKKKITSVALNPVCPWF--LATASLDQTAKIWDLRQLRGKASPFLSTLPHR----RSV 372 (498)
T ss_pred cceEEEEeecCCccchhhhh--hhcccceeecCCCCchh--eeecccCcceeeeehhhhcCCCCcceeccccc----cee
Confidence 4567899987665 222222 34467889999988776 899999999999999863222 2223455 789
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.-|||++-.+++-+.|..|++||
T Consensus 373 ~sAyFSPs~gtl~TT~~D~~IRv~d 397 (498)
T KOG4328|consen 373 NSAYFSPSGGTLLTTCQDNEIRVFD 397 (498)
T ss_pred eeeEEcCCCCceEeeccCCceEEee
Confidence 9999999777799999999999997
No 159
>KOG1063|consensus
Probab=99.10 E-value=2.9e-10 Score=73.85 Aligned_cols=92 Identities=17% Similarity=0.269 Sum_probs=71.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----chheeccccccCCCCe
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT----CVQEITAHRKKFDESI 81 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~~v 81 (106)
-..|++|+..+-.....+.. |.-.+..+.|+|++.+ |++.+.|+++.+|...... .......|. ..|
T Consensus 551 hAvI~lw~t~~W~~~~~L~~--HsLTVT~l~FSpdg~~---LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~Ht----RII 621 (764)
T KOG1063|consen 551 HAVIRLWNTANWLQVQELEG--HSLTVTRLAFSPDGRY---LLSVSRDRTVSLYEVQEDIKDEFRFACLKAHT----RII 621 (764)
T ss_pred ceEEEEEeccchhhhheecc--cceEEEEEEECCCCcE---EEEeecCceEEeeeeecccchhhhhccccccc----eEE
Confidence 34689999987665443333 3434556999999998 8999999999999875432 233456676 789
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..|+|++.+++++|+|.+|++|.
T Consensus 622 WdcsW~pde~~FaTaSRDK~VkVW~ 646 (764)
T KOG1063|consen 622 WDCSWSPDEKYFATASRDKKVKVWE 646 (764)
T ss_pred EEcccCcccceeEEecCCceEEEEe
Confidence 9999999999999999999999994
No 160
>KOG0649|consensus
Probab=99.08 E-value=2.2e-09 Score=62.72 Aligned_cols=65 Identities=14% Similarity=0.093 Sum_probs=50.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
..|+.++.||+++|+....+.. |.+.+.++.--..... +++|++||++|+||.++++++..+...
T Consensus 133 gGD~~~y~~dlE~G~i~r~~rG--HtDYvH~vv~R~~~~q---ilsG~EDGtvRvWd~kt~k~v~~ie~y 197 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGRIQREYRG--HTDYVHSVVGRNANGQ---ILSGAEDGTVRVWDTKTQKHVSMIEPY 197 (325)
T ss_pred cCCeEEEEEEecCCEEEEEEcC--CcceeeeeeecccCcc---eeecCCCccEEEEeccccceeEEeccc
Confidence 4799999999999998555554 5666666544333444 689999999999999999988877643
No 161
>KOG1272|consensus
Probab=99.08 E-value=3.9e-10 Score=70.55 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=78.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
....|.++.-|+.+|+.+..+... ......+.-+|.... +-.|...|+|.+|+.....++..+-.|. +.|.
T Consensus 227 ~~~~G~L~Y~DVS~GklVa~~~t~--~G~~~vm~qNP~NaV---ih~GhsnGtVSlWSP~skePLvKiLcH~----g~V~ 297 (545)
T KOG1272|consen 227 ASEAGFLKYQDVSTGKLVASIRTG--AGRTDVMKQNPYNAV---IHLGHSNGTVSLWSPNSKEPLVKILCHR----GPVS 297 (545)
T ss_pred cccCCceEEEeechhhhhHHHHcc--CCccchhhcCCccce---EEEcCCCceEEecCCCCcchHHHHHhcC----CCcc
Confidence 356788899999999985555442 333334555666655 7899999999999999888888888898 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++++.++|.++++.+.|+.++|||
T Consensus 298 siAv~~~G~YMaTtG~Dr~~kIWD 321 (545)
T KOG1272|consen 298 SIAVDRGGRYMATTGLDRKVKIWD 321 (545)
T ss_pred eEEECCCCcEEeecccccceeEee
Confidence 999999999999999999999998
No 162
>KOG2048|consensus
Probab=99.07 E-value=2.8e-09 Score=69.10 Aligned_cols=96 Identities=19% Similarity=0.194 Sum_probs=73.7
Q ss_pred cCCCceEEEEeCccCceeeecccCC--CCCCCCeeEeee---CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPE--LNSEPPACQTIP---SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
...||.|++||.+.+..+.....+. -..+..++.|+- .... +++|...|+|++||...+..+..+..|.
T Consensus 172 Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t---I~sgDS~G~V~FWd~~~gTLiqS~~~h~--- 245 (691)
T KOG2048|consen 172 GSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST---IASGDSAGTVTFWDSIFGTLIQSHSCHD--- 245 (691)
T ss_pred cccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCc---EEEecCCceEEEEcccCcchhhhhhhhh---
Confidence 3568899999999998866333221 111123333322 2334 7999999999999999999999999998
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..|.+++-.+++..+++++.|+++..+
T Consensus 246 -adVl~Lav~~~~d~vfsaGvd~~ii~~ 272 (691)
T KOG2048|consen 246 -ADVLALAVADNEDRVFSAGVDPKIIQY 272 (691)
T ss_pred -cceeEEEEcCCCCeEEEccCCCceEEE
Confidence 899999999999999999999987654
No 163
>KOG0643|consensus
Probab=99.07 E-value=1.1e-09 Score=64.51 Aligned_cols=76 Identities=11% Similarity=0.056 Sum_probs=67.5
Q ss_pred ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 24 DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
..+.|......+.|+..+.. |.+++.|....+|=..+|..+.++.+|. +.|++++..-+...+++|+.|.+++
T Consensus 5 ~l~GHERplTqiKyN~eGDL---lFscaKD~~~~vw~s~nGerlGty~GHt----GavW~~Did~~s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDL---LFSCAKDSTPTVWYSLNGERLGTYDGHT----GAVWCCDIDWDSKHLITGSADQTAK 77 (327)
T ss_pred ccccCccccceEEecCCCcE---EEEecCCCCceEEEecCCceeeeecCCC----ceEEEEEecCCcceeeeccccceeE
Confidence 34445555667888888877 8999999999999888999999999999 8999999999999999999999999
Q ss_pred EcC
Q psy17135 104 VFV 106 (106)
Q Consensus 104 iwd 106 (106)
+||
T Consensus 78 LWD 80 (327)
T KOG0643|consen 78 LWD 80 (327)
T ss_pred EEE
Confidence 997
No 164
>KOG3881|consensus
Probab=99.06 E-value=1.5e-09 Score=66.52 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=74.5
Q ss_pred CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCC
Q psy17135 2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDE 79 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~ 79 (106)
++..-+++++||.+.++. +..+... .....+..-.|.++. +.+|...+.+..||.+.++.+.. +.+-. +
T Consensus 221 t~T~~hqvR~YDt~~qRRPV~~fd~~--E~~is~~~l~p~gn~---Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t----G 291 (412)
T KOG3881|consen 221 TITRYHQVRLYDTRHQRRPVAQFDFL--ENPISSTGLTPSGNF---IYTGNTKGQLAKFDLRGGKLLGCGLKGIT----G 291 (412)
T ss_pred EEecceeEEEecCcccCcceeEeccc--cCcceeeeecCCCcE---EEEecccchhheecccCceeeccccCCcc----C
Confidence 345668999999998765 2223332 223444555666666 89999999999999999987666 66666 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+..+..+|.++++++|+-|+.+||+|
T Consensus 292 sirsih~hp~~~~las~GLDRyvRIhD 318 (412)
T KOG3881|consen 292 SIRSIHCHPTHPVLASCGLDRYVRIHD 318 (412)
T ss_pred CcceEEEcCCCceEEeeccceeEEEee
Confidence 999999999999999999999999987
No 165
>KOG0307|consensus
Probab=99.05 E-value=8.5e-10 Score=74.67 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=73.3
Q ss_pred cCCCceEEEEeCccCceeeeccc--CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDC--PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.-+||.|.|||++..+. .+.. +...+.+.++.|+..-+.. |++++.++.+-|||++..+++-.+..+..+ ..
T Consensus 135 Ga~~geI~iWDlnn~~t--P~~~~~~~~~~eI~~lsWNrkvqhI--LAS~s~sg~~~iWDlr~~~pii~ls~~~~~--~~ 208 (1049)
T KOG0307|consen 135 GADDGEILIWDLNKPET--PFTPGSQAPPSEIKCLSWNRKVSHI--LASGSPSGRAVIWDLRKKKPIIKLSDTPGR--MH 208 (1049)
T ss_pred cCCCCcEEEeccCCcCC--CCCCCCCCCcccceEeccchhhhHH--hhccCCCCCceeccccCCCcccccccCCCc--cc
Confidence 45799999999998665 3333 2234568889999887776 899999999999999998877777666532 45
Q ss_pred eEEEEEcCCCCE-EEEecCCC---eEEEcC
Q psy17135 81 ILDVAFHPSKPF-IASAGADG---LAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~-~~s~~~d~---~i~iwd 106 (106)
+..+.|+|+... +++++.|. .|.+||
T Consensus 209 ~S~l~WhP~~aTql~~As~dd~~PviqlWD 238 (1049)
T KOG0307|consen 209 CSVLAWHPDHATQLLVASGDDSAPVIQLWD 238 (1049)
T ss_pred eeeeeeCCCCceeeeeecCCCCCceeEeec
Confidence 788999997653 55555443 588887
No 166
>KOG2445|consensus
Probab=99.04 E-value=1.6e-09 Score=64.88 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=59.3
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----cchheeccccccCCCCeEEEEEc-C-CCCEEEEecCCCeE
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----TCVQEITAHRKKFDESILDVAFH-P-SKPFIASAGADGLA 102 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----~~~~~~~~~~~~~~~~v~~~~~~-~-~~~~~~s~~~d~~i 102 (106)
.+-+.++.|.+.+.. +++|+.|++++|||.+.. .+......|. +.|..+.|- | =|+.+|+|+.|+++
T Consensus 13 ~DlihdVs~D~~GRR---mAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~----~Si~rV~WAhPEfGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 13 KDLIHDVSFDFYGRR---MATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD----GSIWRVVWAHPEFGQVVATCSYDRTV 85 (361)
T ss_pred cceeeeeeecccCce---eeeccCCCcEEEEeccCCCCceEEeeeEEecC----CcEEEEEecCccccceEEEEecCCce
Confidence 345777889999988 899999999999997644 3566777888 899999984 4 57889999999999
Q ss_pred EEcC
Q psy17135 103 KVFV 106 (106)
Q Consensus 103 ~iwd 106 (106)
.||.
T Consensus 86 ~iWE 89 (361)
T KOG2445|consen 86 SIWE 89 (361)
T ss_pred eeee
Confidence 9995
No 167
>KOG1273|consensus
Probab=99.03 E-value=1.4e-09 Score=65.55 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=60.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-.||.|.|||+.+... ......|...+.++.|++.+.. |+|++.|..+.+||+..|.+++.+.-. +.|+.
T Consensus 42 c~nG~vvI~D~~T~~i--ar~lsaH~~pi~sl~WS~dgr~---LltsS~D~si~lwDl~~gs~l~rirf~-----spv~~ 111 (405)
T KOG1273|consen 42 CANGRVVIYDFDTFRI--ARMLSAHVRPITSLCWSRDGRK---LLTSSRDWSIKLWDLLKGSPLKRIRFD-----SPVWG 111 (405)
T ss_pred ccCCcEEEEEccccch--hhhhhccccceeEEEecCCCCE---eeeecCCceeEEEeccCCCceeEEEcc-----Cccce
Confidence 3689999999998875 3333334445777999999998 899999999999999999988877644 46777
Q ss_pred EEEcCCC
Q psy17135 84 VAFHPSK 90 (106)
Q Consensus 84 ~~~~~~~ 90 (106)
..|+|..
T Consensus 112 ~q~hp~k 118 (405)
T KOG1273|consen 112 AQWHPRK 118 (405)
T ss_pred eeecccc
Confidence 7777733
No 168
>KOG0641|consensus
Probab=99.00 E-value=1.1e-08 Score=59.41 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=76.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---c-chheeccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---T-CVQEITAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~-~~~~~~~~~~~~~ 78 (106)
.-.|....+||++.++.+.++.. |...+.++.|+|...+ +++++.|..|++=|++.. + ++-.+-.|.
T Consensus 249 g~~dssc~lydirg~r~iq~f~p--hsadir~vrfsp~a~y---llt~syd~~ikltdlqgdla~el~~~vv~ehk---- 319 (350)
T KOG0641|consen 249 GHADSSCMLYDIRGGRMIQRFHP--HSADIRCVRFSPGAHY---LLTCSYDMKIKLTDLQGDLAHELPIMVVAEHK---- 319 (350)
T ss_pred ccCCCceEEEEeeCCceeeeeCC--CccceeEEEeCCCceE---EEEecccceEEEeecccchhhcCceEEEEecc----
Confidence 35688899999999998777776 4667888999998888 899999999999998632 1 122333455
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.+....|+|..-.+++.+.|.++.+|
T Consensus 320 dk~i~~rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 320 DKAIQCRWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred CceEEEEecCccceeeeccCcceEEEe
Confidence 778888999998889999999999999
No 169
>KOG0290|consensus
Probab=98.99 E-value=7.8e-09 Score=61.75 Aligned_cols=96 Identities=19% Similarity=0.352 Sum_probs=68.8
Q ss_pred CCceEEEEeCccCce-------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hheecccc
Q psy17135 5 PSSVIYIWTLLELQT-------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHR 74 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~ 74 (106)
.+-.+|+|.+...+. +...+..++.....+..|+...... +.+.+-|.++.+||++++.. ..++.+|.
T Consensus 119 s~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~--igtSSiDTTCTiWdie~~~~~~vkTQLIAHD 196 (364)
T KOG0290|consen 119 SSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNL--IGTSSIDTTCTIWDIETGVSGTVKTQLIAHD 196 (364)
T ss_pred ccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcce--eEeecccCeEEEEEEeeccccceeeEEEecC
Confidence 345799999874221 1111111122334556777766665 88999999999999998743 56778888
Q ss_pred ccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
..|+.++|...+ ..++|++.||.+|+||
T Consensus 197 ----KEV~DIaf~~~s~~~FASvgaDGSvRmFD 225 (364)
T KOG0290|consen 197 ----KEVYDIAFLKGSRDVFASVGADGSVRMFD 225 (364)
T ss_pred ----cceeEEEeccCccceEEEecCCCcEEEEE
Confidence 899999999844 4699999999999997
No 170
>KOG1587|consensus
Probab=98.98 E-value=1.3e-08 Score=66.15 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=72.8
Q ss_pred CCCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCC
Q psy17135 4 VPSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDES 80 (106)
Q Consensus 4 ~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~ 80 (106)
.+++.+.+|+++.. .+...+.. .+.+.++.|.|..+.. ++.|..+|+|.+||++.+.. ...+..+...|...
T Consensus 219 ~~~~~~~vW~~~~p~~Pe~~~~~---~s~v~~~~f~p~~p~l--l~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~ 293 (555)
T KOG1587|consen 219 EPDGVLLVWSLKNPNTPELVLES---PSEVTCLKFCPFDPNL--LAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEP 293 (555)
T ss_pred cCCceEEEEecCCCCCceEEEec---CCceeEEEeccCCcce--EEeeccCceEEEEEccCCCCCCCcccccccccCCcC
Confidence 34568999999876 33334444 5668889999998886 78999999999999997654 34443333333488
Q ss_pred eEEEEEcCCCCE--EEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPF--IASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~--~~s~~~d~~i~iwd 106 (106)
+..+.|-.+... +++++.||.|..|+
T Consensus 294 v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 294 VTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred eEEEEEeccCCCCceEEEecCCcEeeee
Confidence 999998664444 99999999999984
No 171
>KOG2106|consensus
Probab=98.98 E-value=8.8e-09 Score=65.36 Aligned_cols=91 Identities=12% Similarity=0.163 Sum_probs=70.3
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
+++.-|+++++|+ ..+++..... .....++.|+|.+ . ++.|...|.-.+.|.++...+..... . ..
T Consensus 384 ~T~gqdk~v~lW~--~~k~~wt~~~---~d~~~~~~fhpsg-~---va~Gt~~G~w~V~d~e~~~lv~~~~d-~----~~ 449 (626)
T KOG2106|consen 384 LTCGQDKHVRLWN--DHKLEWTKII---EDPAECADFHPSG-V---VAVGTATGRWFVLDTETQDLVTIHTD-N----EQ 449 (626)
T ss_pred eeccCcceEEEcc--CCceeEEEEe---cCceeEeeccCcc-e---EEEeeccceEEEEecccceeEEEEec-C----Cc
Confidence 3677899999999 3343223333 2346778899988 5 79999999999999988554433333 4 79
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.+++|+|+|..+|.|+.|+.|++|
T Consensus 450 ls~v~ysp~G~~lAvgs~d~~iyiy 474 (626)
T KOG2106|consen 450 LSVVRYSPDGAFLAVGSHDNHIYIY 474 (626)
T ss_pred eEEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999999999999999999999887
No 172
>KOG1034|consensus
Probab=98.97 E-value=9.9e-09 Score=62.08 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=75.8
Q ss_pred CCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 5 PSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
....+.+|+...... +....-+.+......|.|.-.... ..+++.++.-|.|++.|+.++++...+.+|. ..
T Consensus 62 G~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG----~s 137 (385)
T KOG1034|consen 62 GGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHG----GS 137 (385)
T ss_pred CCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccC----cc
Confidence 456677888765442 223333334445677888777664 4567888899999999999999999999998 89
Q ss_pred eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|..+.++|+. ++++++|.|..|++|+
T Consensus 138 INeik~~p~~~qlvls~SkD~svRlwn 164 (385)
T KOG1034|consen 138 INEIKFHPDRPQLVLSASKDHSVRLWN 164 (385)
T ss_pred chhhhcCCCCCcEEEEecCCceEEEEe
Confidence 9999999955 5789999999999996
No 173
>KOG0771|consensus
Probab=98.97 E-value=2e-09 Score=66.33 Aligned_cols=66 Identities=27% Similarity=0.438 Sum_probs=57.3
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..++++..+.. +++++.||.+|+|++.+-..+.....|. ..|.++.|+||+..+++-+.| ..++|+
T Consensus 148 k~vaf~~~gs~---latgg~dg~lRv~~~Ps~~t~l~e~~~~----~eV~DL~FS~dgk~lasig~d-~~~VW~ 213 (398)
T KOG0771|consen 148 KVVAFNGDGSK---LATGGTDGTLRVWEWPSMLTILEEIAHH----AEVKDLDFSPDGKFLASIGAD-SARVWS 213 (398)
T ss_pred eEEEEcCCCCE---eeeccccceEEEEecCcchhhhhhHhhc----CccccceeCCCCcEEEEecCC-ceEEEE
Confidence 56778887777 8999999999999987766666667777 899999999999999999999 888986
No 174
>KOG2055|consensus
Probab=98.97 E-value=6.5e-09 Score=65.10 Aligned_cols=94 Identities=10% Similarity=0.164 Sum_probs=75.4
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.+.|.|.+.-.++++.+..++. .+.+....|..++.. ++..+.+|.|.+||++...+++.+..... -.-+.
T Consensus 322 G~~G~I~lLhakT~eli~s~Ki---eG~v~~~~fsSdsk~---l~~~~~~GeV~v~nl~~~~~~~rf~D~G~---v~gts 392 (514)
T KOG2055|consen 322 GNNGHIHLLHAKTKELITSFKI---EGVVSDFTFSSDSKE---LLASGGTGEVYVWNLRQNSCLHRFVDDGS---VHGTS 392 (514)
T ss_pred ccCceEEeehhhhhhhhheeee---ccEEeeEEEecCCcE---EEEEcCCceEEEEecCCcceEEEEeecCc---cceee
Confidence 4678899999999998887777 455666788877765 67777789999999999988888765541 23456
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.++++.++|+|+..|.|.|||
T Consensus 393 ~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 393 LCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred eeecCCCceEEeccCcceEEEec
Confidence 67788999999999999999986
No 175
>KOG1274|consensus
Probab=98.96 E-value=8.3e-09 Score=68.96 Aligned_cols=93 Identities=16% Similarity=0.290 Sum_probs=78.4
Q ss_pred CcCCCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135 2 QKVPSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
+.+.+++|..|...+++. +.++.. ....+.++..+.. ++.|+.|-.|++-++.+......+.+|.
T Consensus 71 ~~s~~~tv~~y~fps~~~~~iL~Rftl-----p~r~~~v~g~g~~---iaagsdD~~vK~~~~~D~s~~~~lrgh~---- 138 (933)
T KOG1274|consen 71 TGSEQNTVLRYKFPSGEEDTILARFTL-----PIRDLAVSGSGKM---IAAGSDDTAVKLLNLDDSSQEKVLRGHD---- 138 (933)
T ss_pred EeeccceEEEeeCCCCCccceeeeeec-----cceEEEEecCCcE---EEeecCceeEEEEeccccchheeecccC----
Confidence 346678899998877654 333443 3566777787777 8999999999999999998899999998
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.++.|+|.+.+||+++-||.+++||
T Consensus 139 apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 139 APVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred CceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 9999999999999999999999999996
No 176
>KOG2096|consensus
Probab=98.96 E-value=1.1e-08 Score=61.85 Aligned_cols=58 Identities=29% Similarity=0.411 Sum_probs=50.0
Q ss_pred ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 44 SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 44 ~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..++++++.|..|.+|+++ |+.+..+.... ..-+..+.||+|+++++++.--.+++|.
T Consensus 199 ~k~imsas~dt~i~lw~lk-Gq~L~~idtnq----~~n~~aavSP~GRFia~~gFTpDVkVwE 256 (420)
T KOG2096|consen 199 AKYIMSASLDTKICLWDLK-GQLLQSIDTNQ----SSNYDAAVSPDGRFIAVSGFTPDVKVWE 256 (420)
T ss_pred ceEEEEecCCCcEEEEecC-Cceeeeecccc----ccccceeeCCCCcEEEEecCCCCceEEE
Confidence 4567999999999999998 99898888776 5567778999999999999988898884
No 177
>KOG2394|consensus
Probab=98.96 E-value=1.7e-09 Score=68.80 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=63.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..||.+||+|..+.+++-..+. ...+..++.|+|++.+ +++|++|-.|.+|.+..++.+..=++|. .-|..
T Consensus 309 SqDGfLRvF~fdt~eLlg~mkS--YFGGLLCvcWSPDGKy---IvtGGEDDLVtVwSf~erRVVARGqGHk----SWVs~ 379 (636)
T KOG2394|consen 309 SQDGFLRIFDFDTQELLGVMKS--YFGGLLCVCWSPDGKY---IVTGGEDDLVTVWSFEERRVVARGQGHK----SWVSV 379 (636)
T ss_pred ecCceEEEeeccHHHHHHHHHh--hccceEEEEEcCCccE---EEecCCcceEEEEEeccceEEEeccccc----cceee
Confidence 4699999999999887444443 3567888999999999 8999999999999999888887777787 78888
Q ss_pred EEEc
Q psy17135 84 VAFH 87 (106)
Q Consensus 84 ~~~~ 87 (106)
++|.
T Consensus 380 VaFD 383 (636)
T KOG2394|consen 380 VAFD 383 (636)
T ss_pred Eeec
Confidence 8886
No 178
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.95 E-value=1.7e-08 Score=61.92 Aligned_cols=94 Identities=18% Similarity=0.360 Sum_probs=73.6
Q ss_pred CCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
..|+.+.+||... ......... |...+..+.+.|.+.. +++++. ++.+++|+...+..+..+..|. ..+
T Consensus 131 ~~d~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v 201 (466)
T COG2319 131 SLDGTVKLWDLSTPGKLIRTLEG--HSESVTSLAFSPDGKL---LASGSSLDGTIKLWDLRTGKPLSTLAGHT----DPV 201 (466)
T ss_pred CCCccEEEEEecCCCeEEEEEec--CcccEEEEEECCCCCE---EEecCCCCCceEEEEcCCCceEEeeccCC----Cce
Confidence 3488999999987 555334443 3444556888998885 677775 9999999999877788888777 899
Q ss_pred EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
.+++|+|++. .+++++.|+.+++||
T Consensus 202 ~~~~~~~~~~~~~~~~~~d~~i~~wd 227 (466)
T COG2319 202 SSLAFSPDGGLLIASGSSDGTIRLWD 227 (466)
T ss_pred EEEEEcCCcceEEEEecCCCcEEEEE
Confidence 9999999887 566669999999884
No 179
>KOG1310|consensus
Probab=98.94 E-value=6.6e-09 Score=66.64 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=78.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------cchheecc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----------TCVQEITA 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----------~~~~~~~~ 72 (106)
.+.|-.+.|||....++++..... |...+.++.|.|......+ ++|..|..|+++|+... ..++.+..
T Consensus 68 GSDD~r~ivWd~~~~KllhsI~Tg-HtaNIFsvKFvP~tnnriv-~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c 145 (758)
T KOG1310|consen 68 GSDDTRLIVWDPFEYKLLHSISTG-HTANIFSVKFVPYTNNRIV-LSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSC 145 (758)
T ss_pred cCCcceEEeecchhcceeeeeecc-cccceeEEeeeccCCCeEE-EeccCcceEEEEecccccccccccCccchhhhhhh
Confidence 467888999999988886666553 4556888999999877665 89999999999999842 33455666
Q ss_pred ccccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|. .+|-.++-.|++ ..+.+++.||+++.+|
T Consensus 146 ht----~rVKria~~p~~PhtfwsasEDGtirQyD 176 (758)
T KOG1310|consen 146 HT----DRVKRIATAPNGPHTFWSASEDGTIRQYD 176 (758)
T ss_pred hh----hhhhheecCCCCCceEEEecCCcceeeec
Confidence 76 788888888988 5699999999999876
No 180
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.94 E-value=1.8e-08 Score=57.80 Aligned_cols=68 Identities=12% Similarity=0.151 Sum_probs=51.5
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCC---CeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD---GLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~i~iwd 106 (106)
.+..+.|+|.+....+ +.|..+..+.+||++ ++.+..+. . ..+..+.|+|+|++++.++.+ |.+.+||
T Consensus 61 ~I~~~~WsP~g~~fav-i~g~~~~~v~lyd~~-~~~i~~~~--~----~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd 131 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAV-IYGSMPAKVTLYDVK-GKKIFSFG--T----QPRNTISWSPDGRFLVLAGFGNLNGDLEFWD 131 (194)
T ss_pred ceEEEEECcCCCEEEE-EEccCCcccEEEcCc-ccEeEeec--C----CCceEEEECCCCCEEEEEEccCCCcEEEEEE
Confidence 4778999999887422 456677899999996 55555553 3 466789999999999988744 5699997
No 181
>KOG4328|consensus
Probab=98.93 E-value=2.5e-09 Score=66.82 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=71.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES 80 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~ 80 (106)
..+.||+|++-|+++......+...........+.+...... ++.+..-|...+||.+++. .+..+.-|. ..
T Consensus 252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~---vl~~~~~G~f~~iD~R~~~s~~~~~~lh~----kK 324 (498)
T KOG4328|consen 252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRS---VLFGDNVGNFNVIDLRTDGSEYENLRLHK----KK 324 (498)
T ss_pred eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCcc---EEEeecccceEEEEeecCCccchhhhhhh----cc
Confidence 356899999999998766333443222333444555555555 5666666788999999865 466777787 79
Q ss_pred eEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
|..++++|...+ +++|+.|++++|||
T Consensus 325 I~sv~~NP~~p~~laT~s~D~T~kIWD 351 (498)
T KOG4328|consen 325 ITSVALNPVCPWFLATASLDQTAKIWD 351 (498)
T ss_pred cceeecCCCCchheeecccCcceeeee
Confidence 999999996665 89999999999998
No 182
>KOG4378|consensus
Probab=98.92 E-value=6.7e-09 Score=65.88 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=73.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.-.++|+|||++...+ +++.. .|.+.+.++.|+-...+ +++++..|.|-+..+.++.....+..... ..|.-
T Consensus 98 G~~~~Vkiwdl~~kl~-hr~lk-dh~stvt~v~YN~~Dey---iAsvs~gGdiiih~~~t~~~tt~f~~~sg---qsvRl 169 (673)
T KOG4378|consen 98 GQSGCVKIWDLRAKLI-HRFLK-DHQSTVTYVDYNNTDEY---IASVSDGGDIIIHGTKTKQKTTTFTIDSG---QSVRL 169 (673)
T ss_pred CcCceeeehhhHHHHH-hhhcc-CCcceeEEEEecCCcce---eEEeccCCcEEEEecccCccccceecCCC---CeEEE
Confidence 3468999999995444 33333 34556777888888888 89999999999999998887777765542 45668
Q ss_pred EEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
+.|+|..+. |.+++.+|.|.+||
T Consensus 170 l~ys~skr~lL~~asd~G~VtlwD 193 (673)
T KOG4378|consen 170 LRYSPSKRFLLSIASDKGAVTLWD 193 (673)
T ss_pred eecccccceeeEeeccCCeEEEEe
Confidence 999997665 78899999999998
No 183
>KOG1524|consensus
Probab=98.88 E-value=7.4e-09 Score=66.25 Aligned_cols=98 Identities=16% Similarity=0.205 Sum_probs=67.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC---------Cccchheecc-
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD---------NKTCVQEITA- 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~---------~~~~~~~~~~- 72 (106)
+.+||.+.|.+-. ++. ......|...+.+..|+|++.. ++++++||.|++|.-. .+..++....
T Consensus 81 ~s~DGkf~il~k~-~rV--E~sv~AH~~A~~~gRW~~dGtg---Llt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~ 154 (737)
T KOG1524|consen 81 CSNDGRFVILNKS-ARV--ERSISAHAAAISSGRWSPDGAG---LLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWA 154 (737)
T ss_pred EcCCceEEEeccc-chh--hhhhhhhhhhhhhcccCCCCce---eeeecCCceEEEEeccchHHHHHhhcCceeEEEEEC
Confidence 4677777776533 222 2233345666777899999888 8999999999999732 1111111000
Q ss_pred ------------c---------c-----ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 ------------H---------R-----KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ------------~---------~-----~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
| . +.|.+-|.++.|++....+++|+.|-..++||
T Consensus 155 p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD 214 (737)
T KOG1524|consen 155 PNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWD 214 (737)
T ss_pred CCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeec
Confidence 0 0 01447899999999999999999999999998
No 184
>KOG2055|consensus
Probab=98.88 E-value=3.9e-08 Score=61.77 Aligned_cols=100 Identities=11% Similarity=0.161 Sum_probs=70.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc------cchheecc----
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK------TCVQEITA---- 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~------~~~~~~~~---- 72 (106)
+..+|.|.+||++...+++++.-+..- ...+++-++.+.+ +++|+..|.|.|||.++. ++++.+..
T Consensus 362 ~~~~GeV~v~nl~~~~~~~rf~D~G~v-~gts~~~S~ng~y---lA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~ 437 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSCLHRFVDDGSV-HGTSLCISLNGSY---LATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTA 437 (514)
T ss_pred EcCCceEEEEecCCcceEEEEeecCcc-ceeeeeecCCCce---EEeccCcceEEEeccchhhccCCCCchhhhhhhhee
Confidence 457899999999999988888764322 2333444566665 899999999999995532 22221100
Q ss_pred ---------------------------cc------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 ---------------------------HR------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ---------------------------~~------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|. ...-..++|++|+|.+-+++.|-.+|.+.+|.
T Consensus 438 Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 438 ITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK 510 (514)
T ss_pred eeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence 00 00115789999999999999999999999984
No 185
>KOG4714|consensus
Probab=98.88 E-value=5.1e-09 Score=61.65 Aligned_cols=69 Identities=23% Similarity=0.318 Sum_probs=57.6
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
+.++.-+|..+.. +++|+.||.+-+||.++.. +...+.+|+ ..++.+.|+| +...|++++.||.+..||
T Consensus 182 v~~l~~hp~qq~~--v~cgt~dg~~~l~d~rn~~~p~S~l~ahk----~~i~eV~FHpk~p~~Lft~sedGslw~wd 252 (319)
T KOG4714|consen 182 VTALCSHPAQQHL--VCCGTDDGIVGLWDARNVAMPVSLLKAHK----AEIWEVHFHPKNPEHLFTCSEDGSLWHWD 252 (319)
T ss_pred chhhhCCcccccE--EEEecCCCeEEEEEcccccchHHHHHHhh----hhhhheeccCCCchheeEecCCCcEEEEc
Confidence 5556667776665 6899999999999999874 556678888 8999999999 667899999999999987
No 186
>KOG0974|consensus
Probab=98.86 E-value=9.8e-09 Score=69.20 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=76.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+.|.++|+|++.+.+... .....|..++..+.+.|. . ++|+++|.+.++|+.+ ++.+..+..|.. ..+.
T Consensus 193 ~SdDRsiRlW~i~s~~~~~-~~~fgHsaRvw~~~~~~n--~---i~t~gedctcrvW~~~-~~~l~~y~~h~g---~~iw 262 (967)
T KOG0974|consen 193 VSDDRSIRLWPIDSREVLG-CTGFGHSARVWACCFLPN--R---IITVGEDCTCRVWGVN-GTQLEVYDEHSG---KGIW 262 (967)
T ss_pred EecCcceeeeecccccccC-cccccccceeEEEEeccc--e---eEEeccceEEEEEecc-cceehhhhhhhh---ccee
Confidence 4678999999999988754 233345666777888887 4 7999999999999774 555667888875 7899
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++..+.....++++.|+.+++||
T Consensus 263 ~~~~~~~~~~~vT~g~Ds~lk~~~ 286 (967)
T KOG0974|consen 263 KIAVPIGVIIKVTGGNDSTLKLWD 286 (967)
T ss_pred EEEEcCCceEEEeeccCcchhhhh
Confidence 999999999999999999999986
No 187
>KOG1310|consensus
Probab=98.84 E-value=1.5e-08 Score=65.04 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=62.0
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEE
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKV 104 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~i 104 (106)
|.+-+.++.|+..+.. |++|+.|..+.|||.-..+.+..+ .+|. ..|++++|-| +.+.++||..|..|++
T Consensus 49 H~GCVN~LeWn~dG~l---L~SGSDD~r~ivWd~~~~KllhsI~TgHt----aNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 49 HTGCVNCLEWNADGEL---LASGSDDTRLIVWDPFEYKLLHSISTGHT----ANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred ccceecceeecCCCCE---EeecCCcceEEeecchhcceeeeeecccc----cceeEEeeeccCCCeEEEeccCcceEEE
Confidence 5666788999998888 999999999999999877776665 4676 8999999998 5668999999999999
Q ss_pred cC
Q psy17135 105 FV 106 (106)
Q Consensus 105 wd 106 (106)
||
T Consensus 122 fd 123 (758)
T KOG1310|consen 122 FD 123 (758)
T ss_pred Ee
Confidence 86
No 188
>KOG1272|consensus
Probab=98.83 E-value=1.4e-08 Score=63.88 Aligned_cols=90 Identities=8% Similarity=0.208 Sum_probs=69.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
-..|+|.+|.-...+++....+ |.+.+.++...+.+.+ ++|.+.|..++|||+++-..+.++.. + -....
T Consensus 270 hsnGtVSlWSP~skePLvKiLc--H~g~V~siAv~~~G~Y---MaTtG~Dr~~kIWDlR~~~ql~t~~t-p----~~a~~ 339 (545)
T KOG1272|consen 270 HSNGTVSLWSPNSKEPLVKILC--HRGPVSSIAVDRGGRY---MATTGLDRKVKIWDLRNFYQLHTYRT-P----HPASN 339 (545)
T ss_pred CCCceEEecCCCCcchHHHHHh--cCCCcceEEECCCCcE---EeecccccceeEeeeccccccceeec-C----CCccc
Confidence 3579999999999999877777 4556777888888888 89999999999999998776666554 2 35566
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+++|..+ +.+++....+.+|
T Consensus 340 ls~Sqkg--lLA~~~G~~v~iw 359 (545)
T KOG1272|consen 340 LSLSQKG--LLALSYGDHVQIW 359 (545)
T ss_pred ccccccc--ceeeecCCeeeee
Confidence 7777544 5556666677777
No 189
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.82 E-value=1.3e-07 Score=58.15 Aligned_cols=93 Identities=19% Similarity=0.391 Sum_probs=71.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~ 83 (106)
.|+.+++|++..+..+..... |...+..+.|.|.+.. .+++++.|+.+++||...+..+. .+..|. ... .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~--~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~----~~~-~ 246 (466)
T COG2319 176 LDGTIKLWDLRTGKPLSTLAG--HTDPVSSLAFSPDGGL--LIASGSSDGTIRLWDLSTGKLLRSTLSGHS----DSV-V 246 (466)
T ss_pred CCCceEEEEcCCCceEEeecc--CCCceEEEEEcCCcce--EEEEecCCCcEEEEECCCCcEEeeecCCCC----cce-e
Confidence 489999999998666555554 4556777888877662 25566999999999988777766 577776 454 3
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|+|++..+++++.|+.+++|+
T Consensus 247 ~~~~~~~~~~~~~~~d~~~~~~~ 269 (466)
T COG2319 247 SSFSPDGSLLASGSSDGTIRLWD 269 (466)
T ss_pred EeECCCCCEEEEecCCCcEEEee
Confidence 38999988888999999999996
No 190
>KOG0974|consensus
Probab=98.82 E-value=4.7e-08 Score=66.10 Aligned_cols=90 Identities=20% Similarity=0.250 Sum_probs=71.6
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~ 84 (106)
.+.|.+|+....+. ......|...+..+.|+.++.+ +++.|+|+++++|++++.+... ...+|. .+++.+
T Consensus 154 ~~~iivW~~~~dn~--p~~l~GHeG~iF~i~~s~dg~~---i~s~SdDRsiRlW~i~s~~~~~~~~fgHs----aRvw~~ 224 (967)
T KOG0974|consen 154 FGEIIVWKPHEDNK--PIRLKGHEGSIFSIVTSLDGRY---IASVSDDRSIRLWPIDSREVLGCTGFGHS----ARVWAC 224 (967)
T ss_pred cccEEEEeccccCC--cceecccCCceEEEEEccCCcE---EEEEecCcceeeeecccccccCccccccc----ceeEEE
Confidence 46789999873332 2222224555667888888888 8999999999999999987665 667788 999999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|.|. .+++++.|.+.++|+
T Consensus 225 ~~~~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 225 CFLPN--RIITVGEDCTCRVWG 244 (967)
T ss_pred Eeccc--eeEEeccceEEEEEe
Confidence 99998 899999999999994
No 191
>KOG0771|consensus
Probab=98.82 E-value=4.2e-08 Score=60.67 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=73.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-----------
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT----------- 71 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~----------- 71 (106)
...||++|+|+..+... ......|+..+..+.|+|++.. +++.+.| ..++|+.+++.++....
T Consensus 162 gg~dg~lRv~~~Ps~~t--~l~e~~~~~eV~DL~FS~dgk~---lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~c 235 (398)
T KOG0771|consen 162 GGTDGTLRVWEWPSMLT--ILEEIAHHAEVKDLDFSPDGKF---LASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSC 235 (398)
T ss_pred ccccceEEEEecCcchh--hhhhHhhcCccccceeCCCCcE---EEEecCC-ceEEEEeccCchhhhcCCcccchhhhhc
Confidence 35799999999876665 4444456777888999999988 8999998 89999999884332221
Q ss_pred -----c------------ccc----------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 -----A------------HRK----------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 -----~------------~~~----------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. ..+ .....+.+++.+++|++++-|+-||.|.+++
T Consensus 236 RF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~ 309 (398)
T KOG0771|consen 236 RFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYD 309 (398)
T ss_pred eecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEE
Confidence 0 000 0113788899999999999999999988764
No 192
>KOG0280|consensus
Probab=98.81 E-value=7e-08 Score=57.74 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=63.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchhe-eccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQE-ITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~-~~~~~~~~~~~v~ 82 (106)
.+|.+.+-+.........-..+.|.-+.-.+.|....+.. +.+|+.|+.+..||.+- ++.+.+ ...|. .+|.
T Consensus 141 s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnl--vytGgDD~~l~~~D~R~p~~~i~~n~kvH~----~GV~ 214 (339)
T KOG0280|consen 141 SRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNL--VYTGGDDGSLSCWDIRIPKTFIWHNSKVHT----SGVV 214 (339)
T ss_pred CCCcEEEEecceeeeeecccccccceeeeeeecccCCCce--EEecCCCceEEEEEecCCcceeeecceeee----cceE
Confidence 4455554444333332222333345455557777666654 68999999999999993 333322 23344 8999
Q ss_pred EEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
++.-+| ...++++|+.|-.|++||
T Consensus 215 SI~ss~~~~~~I~TGsYDe~i~~~D 239 (339)
T KOG0280|consen 215 SIYSSPPKPTYIATGSYDECIRVLD 239 (339)
T ss_pred EEecCCCCCceEEEeccccceeeee
Confidence 998887 566899999999999997
No 193
>KOG1517|consensus
Probab=98.81 E-value=5.5e-08 Score=66.53 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=66.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCCCe
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDESI 81 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~v 81 (106)
.-..|+|||+..-........... +.+..+ ++....+..++.|..||.|++||.+... .+.....|... ..|
T Consensus 1185 d~r~IRIWDa~~E~~~~diP~~s~-t~vTaL--S~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~--~~I 1259 (1387)
T KOG1517|consen 1185 DVRSIRIWDAHKEQVVADIPYGSS-TLVTAL--SADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDV--EPI 1259 (1387)
T ss_pred CeeEEEEEecccceeEeecccCCC-ccceee--cccccCCceEEEeecCCceEEeecccCCccccceeecccCCc--ccc
Confidence 356899999987776554444321 222222 2222223448999999999999988653 34555666521 238
Q ss_pred EEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
..+.+.+.|-. ++||+.+|.|++||
T Consensus 1260 v~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1260 VHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred eeEEeecCCCcceeeeccCCeEEEEe
Confidence 99999886665 99999999999997
No 194
>KOG2106|consensus
Probab=98.79 E-value=1.8e-07 Score=59.67 Aligned_cols=93 Identities=13% Similarity=0.219 Sum_probs=71.5
Q ss_pred CCceEEEEeCccCceeeecccCCCC--CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELN--SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.-+.+..|+.+.+....+-...+.. ..+.++.|.+.+. ++||..+|.+.||+..+.+..++..+|. ..|+
T Consensus 220 Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd----viTgDS~G~i~Iw~~~~~~~~k~~~aH~----ggv~ 291 (626)
T KOG2106|consen 220 GKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD----VITGDSGGNILIWSKGTNRISKQVHAHD----GGVF 291 (626)
T ss_pred CCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC----EEeecCCceEEEEeCCCceEEeEeeecC----CceE
Confidence 3578999999988776554332211 2344456666554 5999999999999998888777777888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..-.+|.++. |+.|+.|..||
T Consensus 292 ~L~~lr~GtllS-GgKDRki~~Wd 314 (626)
T KOG2106|consen 292 SLCMLRDGTLLS-GGKDRKIILWD 314 (626)
T ss_pred EEEEecCccEee-cCccceEEecc
Confidence 999888887665 99999999997
No 195
>KOG0642|consensus
Probab=98.79 E-value=8.7e-09 Score=65.75 Aligned_cols=71 Identities=23% Similarity=0.325 Sum_probs=60.3
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--------cchheeccccccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
|.+.+....+.+.... ++++++|+.+++|.+... +++.++.+|. +.|.|+.+.+++.++.+|+-|
T Consensus 293 ~~d~ir~l~~~~sep~---lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~----gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 293 HDDCIRALAFHPSEPV---LITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE----GPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred chhhhhhhhcCCCCCe---EEEeccccchhhhhhcccCCccccceeeeEEEeccc----CceEEEEecCCceEEEeeccC
Confidence 4445666777887777 899999999999999321 3467788998 899999999999999999999
Q ss_pred CeEEEc
Q psy17135 100 GLAKVF 105 (106)
Q Consensus 100 ~~i~iw 105 (106)
|+|+.|
T Consensus 366 g~I~~w 371 (577)
T KOG0642|consen 366 GTIRCW 371 (577)
T ss_pred ceeeee
Confidence 999999
No 196
>KOG0650|consensus
Probab=98.78 E-value=8.3e-09 Score=66.57 Aligned_cols=90 Identities=20% Similarity=0.226 Sum_probs=72.7
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~ 85 (106)
..|+|||+..+..+..+.. ....+..++.+|.+.. ++.++.|+.+..+|+.-+ ++.+++.-|. ..+..++
T Consensus 587 ~~vRiYdL~kqelvKkL~t--g~kwiS~msihp~GDn---li~gs~d~k~~WfDldlsskPyk~lr~H~----~avr~Va 657 (733)
T KOG0650|consen 587 RSVRIYDLSKQELVKKLLT--GSKWISSMSIHPNGDN---LILGSYDKKMCWFDLDLSSKPYKTLRLHE----KAVRSVA 657 (733)
T ss_pred cceEEEehhHHHHHHHHhc--CCeeeeeeeecCCCCe---EEEecCCCeeEEEEcccCcchhHHhhhhh----hhhhhhh
Confidence 4699999998776444443 1223444667777777 889999999999999864 6788898888 8999999
Q ss_pred EcCCCCEEEEecCCCeEEEc
Q psy17135 86 FHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iw 105 (106)
|++...++++|+.|+++.++
T Consensus 658 ~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 658 FHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred hccccceeeeecCCCcEEEE
Confidence 99999999999999999876
No 197
>KOG1523|consensus
Probab=98.76 E-value=1.3e-07 Score=57.20 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=72.2
Q ss_pred CCceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-cc--chheeccccccCCCC
Q psy17135 5 PSSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KT--CVQEITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~--~~~~~~~~~~~~~~~ 80 (106)
+...|.||.....++... .....|...+..+.|.|..+. +++++.|....+|.... ++ +.-.+..+. ..
T Consensus 30 ~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snr---Ivtcs~drnayVw~~~~~~~WkptlvLlRiN----rA 102 (361)
T KOG1523|consen 30 NNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNR---IVTCSHDRNAYVWTQPSGGTWKPTLVLLRIN----RA 102 (361)
T ss_pred CCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCc---eeEccCCCCccccccCCCCeeccceeEEEec----cc
Confidence 456789999887774333 344456666777999999999 89999999999998843 33 333333344 68
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.++.|+|.++.+++|+..+.|.+|
T Consensus 103 At~V~WsP~enkFAVgSgar~isVc 127 (361)
T KOG1523|consen 103 ATCVKWSPKENKFAVGSGARLISVC 127 (361)
T ss_pred eeeEeecCcCceEEeccCccEEEEE
Confidence 8999999999999999999988775
No 198
>KOG0650|consensus
Probab=98.74 E-value=7e-08 Score=62.50 Aligned_cols=62 Identities=21% Similarity=0.366 Sum_probs=50.2
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE--EEEec
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF--IASAG 97 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~s~~ 97 (106)
|.+.+.+++..|.+.. |++|+.||+|++|.+.+|.|++++.-. +.|.+++|+|.... |+.+-
T Consensus 399 Htg~Vr~iSvdp~G~w---lasGsdDGtvriWEi~TgRcvr~~~~d-----~~I~~vaw~P~~~~~vLAvA~ 462 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEW---LASGSDDGTVRIWEIATGRCVRTVQFD-----SEIRSVAWNPLSDLCVLAVAV 462 (733)
T ss_pred cCCeEEEEEecCCcce---eeecCCCCcEEEEEeecceEEEEEeec-----ceeEEEEecCCCCceeEEEEe
Confidence 5666677777887777 899999999999999999999998755 58999999996553 44443
No 199
>KOG1188|consensus
Probab=98.74 E-value=1.4e-07 Score=57.38 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=69.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDES 80 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~ 80 (106)
..+-.|.+||.+.-+...+.-...|++.+..+.|+|..+.. |+||+.||.|.+||++... .+.+...+. ..
T Consensus 140 ~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnl--LlSGSvDGLvnlfD~~~d~EeDaL~~viN~~----sS 213 (376)
T KOG1188|consen 140 RSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNL--LLSGSVDGLVNLFDTKKDNEEDALLHVINHG----SS 213 (376)
T ss_pred cCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCe--EEeecccceEEeeecCCCcchhhHHHhhccc----ce
Confidence 35678999999986663344444577788999999998887 8999999999999997542 244444455 67
Q ss_pred eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|..+.|.-.+ ..+..-+-..+..+|+
T Consensus 214 I~~igw~~~~ykrI~clTH~Etf~~~e 240 (376)
T KOG1188|consen 214 IHLIGWLSKKYKRIMCLTHMETFAIYE 240 (376)
T ss_pred eeeeeeecCCcceEEEEEccCceeEEE
Confidence 8999997655 2355555566666653
No 200
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.73 E-value=1.5e-07 Score=60.68 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=56.7
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+.++.++|.... ++.|+.||.|.+||...+.. +..... -....++|+|++..++.|+..|.+.+||
T Consensus 259 ~s~v~~ca~sp~E~k---LvlGC~DgSiiLyD~~~~~t--~~~ka~----~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 259 PSQVICCARSPSEDK---LVLGCEDGSIILYDTTRGVT--LLAKAE----FIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred CCcceEEecCcccce---EEEEecCCeEEEEEcCCCee--eeeeec----ccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 456788999998888 89999999999999976632 222233 4678899999999999999999999997
No 201
>KOG1009|consensus
Probab=98.72 E-value=2.6e-08 Score=61.55 Aligned_cols=93 Identities=17% Similarity=0.261 Sum_probs=74.9
Q ss_pred cCCCceEEEEeCc--------c------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh
Q psy17135 3 KVPSSVIYIWTLL--------E------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ 68 (106)
Q Consensus 3 ~~~d~~i~iwd~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~ 68 (106)
...+|.|.+|-.. + ...+.......|...+..+.|.|.+.. +++++.|..+++||+..|+...
T Consensus 83 g~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~---l~s~s~dns~~l~Dv~~G~l~~ 159 (434)
T KOG1009|consen 83 GGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNF---LVSGSVDNSVRLWDVHAGQLLA 159 (434)
T ss_pred cCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCce---eeeeeccceEEEEEeccceeEe
Confidence 4568899999876 2 112223333346667888999999988 8999999999999999999999
Q ss_pred eeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 69 EITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
.+..|. ..+..++|-|..+++++-+.|+..
T Consensus 160 ~~~dh~----~yvqgvawDpl~qyv~s~s~dr~~ 189 (434)
T KOG1009|consen 160 ILDDHE----HYVQGVAWDPLNQYVASKSSDRHP 189 (434)
T ss_pred eccccc----cccceeecchhhhhhhhhccCccc
Confidence 999998 899999999999999888877743
No 202
>KOG2111|consensus
Probab=98.71 E-value=4.5e-07 Score=54.82 Aligned_cols=95 Identities=21% Similarity=0.273 Sum_probs=64.6
Q ss_pred CceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeE
Q psy17135 6 SSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~ 82 (106)
.+.|.+|... +.+.+..+..... .-..|...|......+..-|-.-|.|++-|+...+. ...+.+|. ..|.
T Consensus 112 ~~~I~VytF~~n~k~l~~~et~~N--PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~----s~Ia 185 (346)
T KOG2111|consen 112 ENKIYVYTFPDNPKLLHVIETRSN--PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHD----SDIA 185 (346)
T ss_pred cCeEEEEEcCCChhheeeeecccC--CCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEccc----Ccee
Confidence 3455555554 3343333333211 122466666666655545566779999999876543 46778898 8999
Q ss_pred EEEEcCCCCEEEEecCCCe-EEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGL-AKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~-i~iwd 106 (106)
|++++.+|..+||+|..|+ |||||
T Consensus 186 cv~Ln~~Gt~vATaStkGTLIRIFd 210 (346)
T KOG2111|consen 186 CVALNLQGTLVATASTKGTLIRIFD 210 (346)
T ss_pred EEEEcCCccEEEEeccCcEEEEEEE
Confidence 9999999999999999998 78875
No 203
>KOG1587|consensus
Probab=98.69 E-value=7.6e-08 Score=62.71 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=71.7
Q ss_pred cCCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~ 79 (106)
...|-+++||... ...++..+.. +......+.|+|..... |+++..+|.+.+||+.... ++....... .
T Consensus 416 s~gDW~vriWs~~~~~~Pl~~~~~--~~~~v~~vaWSptrpav--F~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~----~ 487 (555)
T KOG1587|consen 416 SVGDWTVRIWSEDVIASPLLSLDS--SPDYVTDVAWSPTRPAV--FATVDGDGNLDIWDLLQDDEEPVLSQKVCS----P 487 (555)
T ss_pred eeccceeEeccccCCCCcchhhhh--ccceeeeeEEcCcCceE--EEEEcCCCceehhhhhccccCCcccccccc----c
Confidence 3458899999998 5555333333 34446779999987765 7899999999999998653 344443333 5
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+.++++++.++.|...|++++++
T Consensus 488 ~l~~~~~s~~g~~lavGd~~G~~~~~~ 514 (555)
T KOG1587|consen 488 ALTRVRWSPNGKLLAVGDANGTTHILK 514 (555)
T ss_pred ccceeecCCCCcEEEEecCCCcEEEEE
Confidence 677888999999999999999998874
No 204
>KOG0322|consensus
Probab=98.67 E-value=2.9e-07 Score=54.57 Aligned_cols=97 Identities=19% Similarity=0.262 Sum_probs=67.1
Q ss_pred cCCCceEEEEeCccCceeeeccc--------CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cc-hh-ee
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDC--------PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TC-VQ-EI 70 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~-~~-~~ 70 (106)
...+|.+.+||+.++..+..++. ..|...+.++.|-+....+ ++|+.+..+-.|+++.. .+ ++ .+
T Consensus 171 GyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rG---isgga~dkl~~~Sl~~s~gslq~~~e~ 247 (323)
T KOG0322|consen 171 GYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRG---ISGGADDKLVMYSLNHSTGSLQIRKEI 247 (323)
T ss_pred eccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCC---cCCCccccceeeeeccccCcccccceE
Confidence 35689999999998743222211 1134456667777766665 66777778888987743 21 11 22
Q ss_pred ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 71 TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 71 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.-.. .++..+.+.||++++|+++.|++||+|.
T Consensus 248 ~lkn----pGv~gvrIRpD~KIlATAGWD~RiRVys 279 (323)
T KOG0322|consen 248 TLKN----PGVSGVRIRPDGKILATAGWDHRIRVYS 279 (323)
T ss_pred EecC----CCccceEEccCCcEEeecccCCcEEEEE
Confidence 2222 6889999999999999999999999973
No 205
>KOG2919|consensus
Probab=98.66 E-value=1.5e-07 Score=57.12 Aligned_cols=90 Identities=13% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~ 82 (106)
.|..|..||++.. .++..+.. |....+.-.+......+.+|++|+.+|.|++||+++ +.....+..+. .-++
T Consensus 271 k~dkIl~WDiR~~~~pv~~L~r--hv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s----d~vN 344 (406)
T KOG2919|consen 271 KDDKILCWDIRYSRDPVYALER--HVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS----DTVN 344 (406)
T ss_pred CCCeEEEEeehhccchhhhhhh--hccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccc----cccc
Confidence 4778999999863 33333333 232233322333333444489999999999999998 66666677777 8899
Q ss_pred EEEEcCCCCEEEEecCCC
Q psy17135 83 DVAFHPSKPFIASAGADG 100 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~ 100 (106)
.++++|--.++++++..+
T Consensus 345 gvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 345 GVSLNPIMPILATSSGQR 362 (406)
T ss_pred ceecCcccceeeeccCce
Confidence 999999888888877443
No 206
>KOG1538|consensus
Probab=98.63 E-value=1.6e-07 Score=61.98 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=58.4
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..+.|-|++... +.+. +..+.+||...|..+.++.+|. +-|.+++|+.+|..++||+.|..|.+|.
T Consensus 15 i~d~afkPDGsqL---~lAA-g~rlliyD~ndG~llqtLKgHK----DtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 15 INDIAFKPDGTQL---ILAA-GSRLLVYDTSDGTLLQPLKGHK----DTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred hheeEECCCCceE---EEec-CCEEEEEeCCCccccccccccc----ceEEEEEEccCCceeccCCCceeEEEec
Confidence 6678899998884 3333 2368999999999999999999 8999999999999999999999999994
No 207
>KOG2139|consensus
Probab=98.63 E-value=9.4e-07 Score=54.51 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..+..+.|.+++.. +++++. +..+.+||..++..+.-..... +++.-+.||||+.+++++..|+..++|
T Consensus 196 ~pVtsmqwn~dgt~---l~tAS~gsssi~iWdpdtg~~~pL~~~gl----gg~slLkwSPdgd~lfaAt~davfrlw 265 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTI---LVTASFGSSSIMIWDPDTGQKIPLIPKGL----GGFSLLKWSPDGDVLFAATCDAVFRLW 265 (445)
T ss_pred ceeeEEEEcCCCCE---EeecccCcceEEEEcCCCCCcccccccCC----CceeeEEEcCCCCEEEEecccceeeee
Confidence 34667889888777 677655 4669999999987655553344 788999999999999999999999999
No 208
>KOG2695|consensus
Probab=98.61 E-value=1.3e-07 Score=57.88 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=65.6
Q ss_pred CCceEEEEeCccCce--eeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccc---hheeccccccCC
Q psy17135 5 PSSVIYIWTLLELQT--YARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~ 78 (106)
++|.|..+|++.... ..+...--|.+.+.++.... .++. |++.+++|+|++||.+.-++ +.++.+|...
T Consensus 272 RngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~---LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~-- 346 (425)
T KOG2695|consen 272 RNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQK---LMASDMTGKIKLYDLRATKCKKSVMQYEGHVNL-- 346 (425)
T ss_pred cCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccce---EeeccCcCceeEeeehhhhcccceeeeeccccc--
Confidence 578899999986521 01122222444455555555 3334 78899999999999998777 7788888732
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..-.-+...+.+..+++++.|...++|.
T Consensus 347 ~a~l~~~v~~eeg~I~s~GdDcytRiWs 374 (425)
T KOG2695|consen 347 SAYLPAHVKEEEGSIFSVGDDCYTRIWS 374 (425)
T ss_pred ccccccccccccceEEEccCeeEEEEEe
Confidence 1222334567777899999999999994
No 209
>KOG1523|consensus
Probab=98.60 E-value=2e-07 Score=56.42 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=70.8
Q ss_pred CcCCCceEEEEeC-ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hheeccccccC
Q psy17135 2 QKVPSSVIYIWTL-LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHRKKF 77 (106)
Q Consensus 2 ~~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~ 77 (106)
++.-|.--++|.. ..++....+....++....++.|.|.++. +++|+..+.|.+|=++.... .+++..+-
T Consensus 72 tcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk---FAVgSgar~isVcy~E~ENdWWVsKhikkPi--- 145 (361)
T KOG1523|consen 72 TCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK---FAVGSGARLISVCYYEQENDWWVSKHIKKPI--- 145 (361)
T ss_pred EccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce---EEeccCccEEEEEEEecccceehhhhhCCcc---
Confidence 3455666678887 33433334444446777888999999999 89999999999986654331 22232221
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+..|.+++|+|+.-.+++|+.|+..++|
T Consensus 146 rStv~sldWhpnnVLlaaGs~D~k~rVf 173 (361)
T KOG1523|consen 146 RSTVTSLDWHPNNVLLAAGSTDGKCRVF 173 (361)
T ss_pred ccceeeeeccCCcceecccccCcceeEE
Confidence 2789999999999999999999999987
No 210
>KOG2919|consensus
Probab=98.60 E-value=5.4e-07 Score=54.83 Aligned_cols=96 Identities=8% Similarity=0.012 Sum_probs=71.3
Q ss_pred CCceEEEEeCc-cCceeeecccCC----C-CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135 5 PSSVIYIWTLL-ELQTYARNDCPE----L-NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~-~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
...+|+++|+. .|.--....... . .+.+.+..++|..... ++.++....+-|+......++..+.+|.
T Consensus 177 ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~--~a~gsY~q~~giy~~~~~~pl~llggh~---- 250 (406)
T KOG2919|consen 177 YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKT--LAVGSYGQRVGIYNDDGRRPLQLLGGHG---- 250 (406)
T ss_pred ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcc--eeeecccceeeeEecCCCCceeeecccC----
Confidence 35679999994 433222221111 1 2233447788887754 7889999999999888888899998898
Q ss_pred CCeEEEEEcCCCCEEEEecC-CCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGA-DGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~-d~~i~iwd 106 (106)
++|+.+.|.++|+.+++|.+ +..|..||
T Consensus 251 gGvThL~~~edGn~lfsGaRk~dkIl~WD 279 (406)
T KOG2919|consen 251 GGVTHLQWCEDGNKLFSGARKDDKILCWD 279 (406)
T ss_pred CCeeeEEeccCcCeecccccCCCeEEEEe
Confidence 89999999999999999885 56788886
No 211
>KOG1063|consensus
Probab=98.60 E-value=2e-07 Score=61.12 Aligned_cols=70 Identities=27% Similarity=0.407 Sum_probs=57.2
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
-.+.++..+|.++. ++|++.. ..|++|+..+-...+.+..|. -.|+.++||||+++|++.|+|+++.+
T Consensus 526 yEv~~l~~s~~gnl---iASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs----LTVT~l~FSpdg~~LLsvsRDRt~sl 598 (764)
T KOG1063|consen 526 YEVYALAISPTGNL---IASACKSSLKEHAVIRLWNTANWLQVQELEGHS----LTVTRLAFSPDGRYLLSVSRDRTVSL 598 (764)
T ss_pred eeEEEEEecCCCCE---EeehhhhCCccceEEEEEeccchhhhheecccc----eEEEEEEECCCCcEEEEeecCceEEe
Confidence 34555666666666 7887544 348899998888888899998 89999999999999999999999998
Q ss_pred cC
Q psy17135 105 FV 106 (106)
Q Consensus 105 wd 106 (106)
|.
T Consensus 599 ~~ 600 (764)
T KOG1063|consen 599 YE 600 (764)
T ss_pred ee
Confidence 84
No 212
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.57 E-value=4.9e-07 Score=56.68 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=65.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...++.|.+.|..+.+.+..+... . .... ..+.|++.. +..++.|+.|.++|+.+.+.++++..- ...
T Consensus 12 ~~~~~~v~viD~~t~~~~~~i~~~--~-~~h~~~~~s~Dgr~---~yv~~rdg~vsviD~~~~~~v~~i~~G-----~~~ 80 (369)
T PF02239_consen 12 ERGSGSVAVIDGATNKVVARIPTG--G-APHAGLKFSPDGRY---LYVANRDGTVSVIDLATGKVVATIKVG-----GNP 80 (369)
T ss_dssp EGGGTEEEEEETTT-SEEEEEE-S--T-TEEEEEE-TT-SSE---EEEEETTSEEEEEETTSSSEEEEEE-S-----SEE
T ss_pred ecCCCEEEEEECCCCeEEEEEcCC--C-CceeEEEecCCCCE---EEEEcCCCeEEEEECCcccEEEEEecC-----CCc
Confidence 457899999999999987777652 1 2222 456677776 566678999999999999988888754 367
Q ss_pred EEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
..++++++|+++++++ .++.+.++|
T Consensus 81 ~~i~~s~DG~~~~v~n~~~~~v~v~D 106 (369)
T PF02239_consen 81 RGIAVSPDGKYVYVANYEPGTVSVID 106 (369)
T ss_dssp EEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred ceEEEcCCCCEEEEEecCCCceeEec
Confidence 8899999999977665 677887765
No 213
>KOG2139|consensus
Probab=98.53 E-value=2.5e-06 Score=52.73 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=63.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC-CccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD-NKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~v 81 (106)
+..|..|.|||..++..+... ...-.++..+.|+|++.. +.++..|+..++|... +....+...+. +.|
T Consensus 214 S~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPdgd~---lfaAt~davfrlw~e~q~wt~erw~lgs-----grv 283 (445)
T KOG2139|consen 214 SFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPDGDV---LFAATCDAVFRLWQENQSWTKERWILGS-----GRV 283 (445)
T ss_pred ccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCCCCE---EEEecccceeeeehhcccceecceeccC-----Cce
Confidence 345778999999998874333 222345667999999998 8889999999999554 34445544433 588
Q ss_pred EEEEEcCCCCE-EEEecCCCe
Q psy17135 82 LDVAFHPSKPF-IASAGADGL 101 (106)
Q Consensus 82 ~~~~~~~~~~~-~~s~~~d~~ 101 (106)
....|+|+|.. +++++....
T Consensus 284 qtacWspcGsfLLf~~sgsp~ 304 (445)
T KOG2139|consen 284 QTACWSPCGSFLLFACSGSPR 304 (445)
T ss_pred eeeeecCCCCEEEEEEcCCce
Confidence 88899999987 455554433
No 214
>KOG1517|consensus
Probab=98.49 E-value=1.1e-06 Score=60.57 Aligned_cols=100 Identities=18% Similarity=0.178 Sum_probs=66.0
Q ss_pred CCcCCCceEEEEeCcc-----Cceeeecc---cCCCC-CCC-CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 1 MQKVPSSVIYIWTLLE-----LQTYARND---CPELN-SEP-PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~-----~~~~~~~~---~~~~~-~~~-~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
|+...||.|+||+--. .+.+.... .+... .+. ....|...... |++++.-..|+|||....+.++.+
T Consensus 1127 Ltas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~---Ll~tGd~r~IRIWDa~~E~~~~di 1203 (1387)
T KOG1517|consen 1127 LTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGH---LLVTGDVRSIRIWDAHKEQVVADI 1203 (1387)
T ss_pred eeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCe---EEecCCeeEEEEEecccceeEeec
Confidence 4678899999998432 22222111 11111 112 33566666666 566666889999999988888777
Q ss_pred ccccccCCCCeEEEEEc-CCCCEEEEecCCCeEEEcC
Q psy17135 71 TAHRKKFDESILDVAFH-PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 71 ~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~i~iwd 106 (106)
..... ..++++.-+ +.|..+++|..||.+++||
T Consensus 1204 P~~s~---t~vTaLS~~~~~gn~i~AGfaDGsvRvyD 1237 (1387)
T KOG1517|consen 1204 PYGSS---TLVTALSADLVHGNIIAAGFADGSVRVYD 1237 (1387)
T ss_pred ccCCC---ccceeecccccCCceEEEeecCCceEEee
Confidence 65542 566666543 3678999999999999997
No 215
>KOG1538|consensus
Probab=98.49 E-value=1.7e-06 Score=57.35 Aligned_cols=95 Identities=9% Similarity=0.120 Sum_probs=68.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh--------ee--cc--
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ--------EI--TA-- 72 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~--------~~--~~-- 72 (106)
++..+.+||...|..+..++. |.+-+.++.|+.++.. +++|+.|..|-+|..+-.-.++ .. +.
T Consensus 31 Ag~rlliyD~ndG~llqtLKg--HKDtVycVAys~dGkr---FASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~ 105 (1081)
T KOG1538|consen 31 AGSRLLVYDTSDGTLLQPLKG--HKDTVYCVAYAKDGKR---FASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPIT 105 (1081)
T ss_pred cCCEEEEEeCCCccccccccc--ccceEEEEEEccCCce---eccCCCceeEEEecccccceeeeccCCeeeEeecCchH
Confidence 456789999999999777766 4555778999999988 8999999999999865321111 00 00
Q ss_pred c---------------------cccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 73 H---------------------RKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 73 ~---------------------~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
| ..+...++.+.+|.-||.+++-|-.+|+|.+
T Consensus 106 h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsi 158 (1081)
T KOG1538|consen 106 HQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISI 158 (1081)
T ss_pred HHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEe
Confidence 0 0012356778888889999999999998876
No 216
>KOG4547|consensus
Probab=98.45 E-value=3.9e-06 Score=54.15 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=78.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..+-|.|.+|+...++.-..+....|...+..+.+...-.. +.+++.|+.+..|+...++.++.+.... ..+.
T Consensus 76 gt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~c---iyS~~ad~~v~~~~~~~~~~~~~~~~~~----~~~~ 148 (541)
T KOG4547|consen 76 GTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGC---IYSVGADLKVVYILEKEKVIIRIWKEQK----PLVS 148 (541)
T ss_pred ecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCc---eEecCCceeEEEEecccceeeeeeccCC----Cccc
Confidence 45789999999999998777776666766777777776666 7999999999999999999888888877 7889
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.++||+..+++++ +.|++||
T Consensus 149 sl~is~D~~~l~~as--~~ik~~~ 170 (541)
T KOG4547|consen 149 SLCISPDGKILLTAS--RQIKVLD 170 (541)
T ss_pred eEEEcCCCCEEEecc--ceEEEEE
Confidence 999999999998876 4566554
No 217
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.45 E-value=1.1e-06 Score=36.10 Aligned_cols=37 Identities=30% Similarity=0.556 Sum_probs=31.2
Q ss_pred chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+...+..|. ..+.++.|++.+..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHT----GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecC----CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 344555566 7899999999889999999999999996
No 218
>KOG2321|consensus
Probab=98.45 E-value=2.2e-06 Score=55.69 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=69.5
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc------ccc-cCCCC
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA------HRK-KFDES 80 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~------~~~-~~~~~ 80 (106)
.|+=.|+..|.-+.++... ......+..++.... +++|+.+|.|..||.+....+..+.. ++. .....
T Consensus 156 evYRlNLEqGrfL~P~~~~--~~~lN~v~in~~hgL---la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~s 230 (703)
T KOG2321|consen 156 EVYRLNLEQGRFLNPFETD--SGELNVVSINEEHGL---LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPS 230 (703)
T ss_pred ceEEEEccccccccccccc--cccceeeeecCccce---EEecccCceEEEecchhhhhheeeecccccCCCccccccCc
Confidence 3555677777776666663 344666777777766 89999999999999998766555432 221 11245
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|++++|+-+|-.++.|..+|.+.|||
T Consensus 231 vTal~F~d~gL~~aVGts~G~v~iyD 256 (703)
T KOG2321|consen 231 VTALKFRDDGLHVAVGTSTGSVLIYD 256 (703)
T ss_pred ceEEEecCCceeEEeeccCCcEEEEE
Confidence 99999999999999999999999986
No 219
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.44 E-value=3.1e-06 Score=54.08 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=57.6
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe-eCCCCcEEEe--eCCCccchheeccccccCCCCeE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR-PGHDCSIRLW--NLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
+..|.+||+.+++........ .......|+|++.. ++. .+.++...+| |+.++. ...+..+. ..+.
T Consensus 227 ~~~i~i~dl~tg~~~~l~~~~---g~~~~~~wSPDG~~---La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~----~~~~ 295 (429)
T PRK01742 227 KSQLVVHDLRSGARKVVASFR---GHNGAPAFSPDGSR---LAFASSKDGVLNIYVMGANGGT-PSQLTSGA----GNNT 295 (429)
T ss_pred CcEEEEEeCCCCceEEEecCC---CccCceeECCCCCE---EEEEEecCCcEEEEEEECCCCC-eEeeccCC----CCcC
Confidence 457999999887642222221 12335789998887 444 4567776665 555554 44555555 5677
Q ss_pred EEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIA-SAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~-s~~~d~~i~iwd 106 (106)
...|+|++..++ ++..++...+|+
T Consensus 296 ~~~wSpDG~~i~f~s~~~g~~~I~~ 320 (429)
T PRK01742 296 EPSWSPDGQSILFTSDRSGSPQVYR 320 (429)
T ss_pred CEEECCCCCEEEEEECCCCCceEEE
Confidence 899999999755 455677777763
No 220
>KOG1963|consensus
Probab=98.42 E-value=3.7e-06 Score=56.40 Aligned_cols=92 Identities=12% Similarity=0.167 Sum_probs=71.3
Q ss_pred CCceEEEEeCcc--CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLE--LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
-||.|.+|.-.. +........+.|+..+.++.|++.+.+ +.+|+.++.+-+|.+.+++ +++-..- .+.|.
T Consensus 225 ~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~---LlSGG~E~VLv~Wq~~T~~--kqfLPRL---gs~I~ 296 (792)
T KOG1963|consen 225 SDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAY---LLSGGREGVLVLWQLETGK--KQFLPRL---GSPIL 296 (792)
T ss_pred cCCcEEEEeccccccccccceEEEecccccceeEEecCCce---EeecccceEEEEEeecCCC--ccccccc---CCeeE
Confidence 478999997543 333223333346778899999999999 8999999999999999887 4443333 27899
Q ss_pred EEEEcCCCCEEEEecCCCeEEE
Q psy17135 83 DVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~i 104 (106)
.+.++||+...+....|..|.+
T Consensus 297 ~i~vS~ds~~~sl~~~DNqI~l 318 (792)
T KOG1963|consen 297 HIVVSPDSDLYSLVLEDNQIHL 318 (792)
T ss_pred EEEEcCCCCeEEEEecCceEEE
Confidence 9999999999999999998865
No 221
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.42 E-value=6.6e-06 Score=50.72 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=60.2
Q ss_pred CCceEEEEeCccCcee-eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-----eccccccCC
Q psy17135 5 PSSVIYIWTLLELQTY-ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-----ITAHRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-----~~~~~~~~~ 78 (106)
.++.|.+|++.+...+ .......+......+.+.|.+... +++...++.|.+||+++...+.. ......
T Consensus 100 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l--~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g--- 174 (330)
T PRK11028 100 NANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTL--WVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG--- 174 (330)
T ss_pred CCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEE--EEeeCCCCEEEEEEECCCCcccccCCCceecCCC---
Confidence 4788999999743211 111111112234566788877663 46667779999999976332211 111121
Q ss_pred CCeEEEEEcCCCCEEEEecC-CCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGA-DGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~-d~~i~iwd 106 (106)
.....+.|+|++++++++.. ++++.+|+
T Consensus 175 ~~p~~~~~~pdg~~lyv~~~~~~~v~v~~ 203 (330)
T PRK11028 175 AGPRHMVFHPNQQYAYCVNELNSSVDVWQ 203 (330)
T ss_pred CCCceEEECCCCCEEEEEecCCCEEEEEE
Confidence 45677899999999877765 88888875
No 222
>KOG4227|consensus
Probab=98.42 E-value=4e-06 Score=52.48 Aligned_cols=98 Identities=7% Similarity=-0.023 Sum_probs=72.8
Q ss_pred cCCCceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135 3 KVPSSVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 76 (106)
...|-.+++|++.. .+++. +..++|.+.+.++.|...... +.+|..+++|-.-|+.+.+.+..+. |..
T Consensus 74 GGDD~~~~~W~~de~~~~k~~KPI~-~~~~~H~SNIF~L~F~~~N~~---~~SG~~~~~VI~HDiEt~qsi~V~~-~~~- 147 (609)
T KOG4227|consen 74 GGDDMHGRVWNVDELMVRKTPKPIG-VMEHPHRSNIFSLEFDLENRF---LYSGERWGTVIKHDIETKQSIYVAN-ENN- 147 (609)
T ss_pred cCCcceeeeechHHHHhhcCCCCce-eccCccccceEEEEEccCCee---EecCCCcceeEeeecccceeeeeec-ccC-
Confidence 34677899999863 23211 222334466777777776666 8999999999999999888766554 321
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++.|+.+.-+|..+.+++.+.++.|.+||
T Consensus 148 ~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D 177 (609)
T KOG4227|consen 148 NRGDVYHMDQHPTDNTLIVVTRAKLVSFID 177 (609)
T ss_pred cccceeecccCCCCceEEEEecCceEEEEe
Confidence 126899999999989999999999999997
No 223
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.41 E-value=2.8e-07 Score=39.13 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=26.7
Q ss_pred CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEee
Q psy17135 27 ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWN 60 (106)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd 60 (106)
.|...+..+.|.|.+.. +++++.|+.|++||
T Consensus 9 ~h~~~i~~i~~~~~~~~---~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 9 GHSSSINSIAWSPDGNF---LASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSSEEEEEEETTSSE---EEEEETTSEEEEEE
T ss_pred CCCCcEEEEEEeccccc---ceeeCCCCEEEEEC
Confidence 35667888999999777 89999999999997
No 224
>KOG4497|consensus
Probab=98.41 E-value=3.5e-06 Score=51.63 Aligned_cols=85 Identities=19% Similarity=0.291 Sum_probs=65.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.|+.|.+|++...+- ..+.+....+.....|+|++... +.+...+-.+.+|++.+.+.. .++ |++ ..+..+
T Consensus 69 k~~~vqvwsl~Qpew--~ckIdeg~agls~~~WSPdgrhi--L~tseF~lriTVWSL~t~~~~-~~~-~pK---~~~kg~ 139 (447)
T KOG4497|consen 69 KDPKVQVWSLVQPEW--YCKIDEGQAGLSSISWSPDGRHI--LLTSEFDLRITVWSLNTQKGY-LLP-HPK---TNVKGY 139 (447)
T ss_pred ccceEEEEEeeccee--EEEeccCCCcceeeeECCCcceE--eeeecceeEEEEEEeccceeE-Eec-ccc---cCceeE
Confidence 478899999987666 55555567778889999999775 778899999999999877643 233 332 567889
Q ss_pred EEcCCCCEEEEecC
Q psy17135 85 AFHPSKPFIASAGA 98 (106)
Q Consensus 85 ~~~~~~~~~~s~~~ 98 (106)
+|+|++++.+-+++
T Consensus 140 ~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 140 AFHPDGQFCAILSR 153 (447)
T ss_pred EECCCCceeeeeec
Confidence 99999998776654
No 225
>KOG0644|consensus
Probab=98.41 E-value=1.6e-07 Score=63.02 Aligned_cols=72 Identities=17% Similarity=0.310 Sum_probs=63.0
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|...+.++.+...+.+ +.+|+.|..++||...++.++....+|. ..++.++.+-+...+++++.|..|++|.
T Consensus 189 H~naVyca~fDrtg~~---Iitgsdd~lvKiwS~et~~~lAs~rGhs----~ditdlavs~~n~~iaaaS~D~vIrvWr 260 (1113)
T KOG0644|consen 189 HRNAVYCAIFDRTGRY---IITGSDDRLVKIWSMETARCLASCRGHS----GDITDLAVSSNNTMIAAASNDKVIRVWR 260 (1113)
T ss_pred hhhheeeeeeccccce---EeecCccceeeeeeccchhhhccCCCCc----cccchhccchhhhhhhhcccCceEEEEe
Confidence 4444566667777777 8999999999999999999999999999 8999999998888899999999999994
No 226
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.35 E-value=9.5e-06 Score=51.89 Aligned_cols=89 Identities=11% Similarity=0.066 Sum_probs=56.6
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
+..|.+||...... ..+.. +........|+|.+.. ++..+. +..+.+||+.+++.. .+.... ....
T Consensus 183 ~~~i~i~d~dg~~~-~~lt~--~~~~v~~p~wSPDG~~---la~~s~~~~~~~i~i~dl~tg~~~-~l~~~~----g~~~ 251 (429)
T PRK01742 183 PYEVRVADYDGFNQ-FIVNR--SSQPLMSPAWSPDGSK---LAYVSFENKKSQLVVHDLRSGARK-VVASFR----GHNG 251 (429)
T ss_pred eEEEEEECCCCCCc-eEecc--CCCccccceEcCCCCE---EEEEEecCCCcEEEEEeCCCCceE-EEecCC----CccC
Confidence 57899999876543 22222 2334667899999988 444432 346999999877532 122122 2334
Q ss_pred EEEEcCCCCEEEEe-cCCCeEEEc
Q psy17135 83 DVAFHPSKPFIASA-GADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~~~~~~s~-~~d~~i~iw 105 (106)
..+|+|+++.++.+ +.++.+.||
T Consensus 252 ~~~wSPDG~~La~~~~~~g~~~Iy 275 (429)
T PRK01742 252 APAFSPDGSRLAFASSKDGVLNIY 275 (429)
T ss_pred ceeECCCCCEEEEEEecCCcEEEE
Confidence 67999999987765 467766665
No 227
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.34 E-value=1.5e-05 Score=49.15 Aligned_cols=93 Identities=13% Similarity=0.067 Sum_probs=58.3
Q ss_pred CCCceEEEEeCcc-Cce--eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccc--hheeccccccC
Q psy17135 4 VPSSVIYIWTLLE-LQT--YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTC--VQEITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~--~~~~~~~~~~~ 77 (106)
..++.|++||+.+ ++. +..+.. ......+.++|.+... ++++..++.|.+|+++. ++. ..... ..
T Consensus 9 ~~~~~I~~~~~~~~g~l~~~~~~~~---~~~~~~l~~spd~~~l--yv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~--- 79 (330)
T PRK11028 9 PESQQIHVWNLNHEGALTLLQVVDV---PGQVQPMVISPDKRHL--YVGVRPEFRVLSYRIADDGALTFAAESP-LP--- 79 (330)
T ss_pred CCCCCEEEEEECCCCceeeeeEEec---CCCCccEEECCCCCEE--EEEECCCCcEEEEEECCCCceEEeeeec-CC---
Confidence 4589999999964 332 222221 2345567788877662 24445678899999863 332 22221 22
Q ss_pred CCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
.....+.++|+++.+++++ .++.+.+|+
T Consensus 80 -~~p~~i~~~~~g~~l~v~~~~~~~v~v~~ 108 (330)
T PRK11028 80 -GSPTHISTDHQGRFLFSASYNANCVSVSP 108 (330)
T ss_pred -CCceEEEECCCCCEEEEEEcCCCeEEEEE
Confidence 3567899999999877665 467777774
No 228
>KOG1334|consensus
Probab=98.33 E-value=1.4e-06 Score=55.45 Aligned_cols=63 Identities=21% Similarity=0.293 Sum_probs=55.7
Q ss_pred eeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 37 TIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 37 ~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|-|..++ +++|+.-|.|++|+-.+++.++-+.+.. .-|+|+.-+|--.+||+++-|..|+||-
T Consensus 402 fGPrsEy---VvSGSDCGhIFiW~K~t~eii~~MegDr----~VVNCLEpHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 402 FGPRSEY---VVSGSDCGHIFIWDKKTGEIIRFMEGDR----HVVNCLEPHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred ccCccce---EEecCccceEEEEecchhHHHHHhhccc----ceEeccCCCCCCchhhccCCccceeeec
Confidence 3455555 8999999999999999999999998887 6899999999999999999999999993
No 229
>KOG2315|consensus
Probab=98.33 E-value=9.4e-06 Score=52.42 Aligned_cols=88 Identities=17% Similarity=0.279 Sum_probs=60.5
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH 87 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 87 (106)
++.|+|++ +.. .+... .+..+++.|+|.++...+..=|.--|.+-+||+.+.+++..+.+. ..+-+.|+
T Consensus 295 kvtifnlr-~~~--v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~------~tt~~eW~ 363 (566)
T KOG2315|consen 295 KVTIFNLR-GKP--VFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA------NTTVFEWS 363 (566)
T ss_pred eEEEEcCC-CCE--eEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccC------CceEEEEc
Confidence 46677775 333 34442 344677889999998533222344588999999998887777644 44667999
Q ss_pred CCCCEEEEecC------CCeEEEcC
Q psy17135 88 PSKPFIASAGA------DGLAKVFV 106 (106)
Q Consensus 88 ~~~~~~~s~~~------d~~i~iwd 106 (106)
|||.++.++.. |..++||+
T Consensus 364 PdGe~flTATTaPRlrvdNg~Kiwh 388 (566)
T KOG2315|consen 364 PDGEYFLTATTAPRLRVDNGIKIWH 388 (566)
T ss_pred CCCcEEEEEeccccEEecCCeEEEE
Confidence 99999988774 45677774
No 230
>KOG4547|consensus
Probab=98.28 E-value=1.2e-05 Score=51.97 Aligned_cols=92 Identities=14% Similarity=0.101 Sum_probs=69.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..+|..+..|+.++...+..+... +....++...|++.. +++++ +++++||+++++.+.++.+|. ..|.
T Consensus 120 ~~ad~~v~~~~~~~~~~~~~~~~~--~~~~~sl~is~D~~~---l~~as--~~ik~~~~~~kevv~~ftgh~----s~v~ 188 (541)
T KOG4547|consen 120 VGADLKVVYILEKEKVIIRIWKEQ--KPLVSSLCISPDGKI---LLTAS--RQIKVLDIETKEVVITFTGHG----SPVR 188 (541)
T ss_pred cCCceeEEEEecccceeeeeeccC--CCccceEEEcCCCCE---EEecc--ceEEEEEccCceEEEEecCCC----cceE
Confidence 467899999999998886666664 334556777887666 67777 689999999999999999999 8999
Q ss_pred EEEEcCC-----CCEEEE-ecCCCeEEEc
Q psy17135 83 DVAFHPS-----KPFIAS-AGADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~-----~~~~~s-~~~d~~i~iw 105 (106)
++.|-.+ |.++.+ ...+..+.+|
T Consensus 189 t~~f~~~~~g~~G~~vLssa~~~r~i~~w 217 (541)
T KOG4547|consen 189 TLSFTTLIDGIIGKYVLSSAAAERGITVW 217 (541)
T ss_pred EEEEEEeccccccceeeeccccccceeEE
Confidence 9998765 555444 4444445444
No 231
>KOG1240|consensus
Probab=98.26 E-value=2e-05 Score=55.29 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=66.4
Q ss_pred CcCCCceEEEEeCccCcee----e-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--c-----chhe
Q psy17135 2 QKVPSSVIYIWTLLELQTY----A-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--T-----CVQE 69 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~-----~~~~ 69 (106)
+.+.||+|++||++....- . .....-..+.+..+...+.+.. ++.++.||.|++.+++.. . +.+.
T Consensus 1066 sgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~---~Av~t~DG~v~~~~id~~~~~~~~~~~~ri 1142 (1431)
T KOG1240|consen 1066 SGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ---FAVSTKDGSVRVLRIDHYNVSKRVATQVRI 1142 (1431)
T ss_pred EecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe---EEEEcCCCeEEEEEccccccccceeeeeec
Confidence 5678999999999752210 0 1111112334445666666666 788899999999887641 1 0000
Q ss_pred ec--------------ccc------------------------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 70 IT--------------AHR------------------------------KKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 70 ~~--------------~~~------------------------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.. .+. ....+.|++++.+|.+.+++.|...|.+.+|
T Consensus 1143 ~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lW 1222 (1431)
T KOG1240|consen 1143 PNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLW 1222 (1431)
T ss_pred ccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEE
Confidence 00 000 0134689999999999999999999999999
Q ss_pred C
Q psy17135 106 V 106 (106)
Q Consensus 106 d 106 (106)
|
T Consensus 1223 D 1223 (1431)
T KOG1240|consen 1223 D 1223 (1431)
T ss_pred E
Confidence 7
No 232
>KOG1524|consensus
Probab=98.26 E-value=3.5e-06 Score=54.52 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-------------------------ccCCCCeE
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-------------------------KKFDESIL 82 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-------------------------~~~~~~v~ 82 (106)
|.+-+.++.|++.+.. +++|++|-..++||.. |..+..-..|+ +.+.+.|+
T Consensus 185 HDGiiL~~~W~~~s~l---I~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSif 260 (737)
T KOG1524|consen 185 HDGLVLSLSWSTQSNI---IASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIF 260 (737)
T ss_pred cCcEEEEeecCccccc---eeecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceE
Confidence 6666677999998888 8999999999999975 33332222222 11235677
Q ss_pred EEEEcCCCCEEEEecCCCeE
Q psy17135 83 DVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i 102 (106)
.++||+||..++.|...|.+
T Consensus 261 nlsWS~DGTQ~a~gt~~G~v 280 (737)
T KOG1524|consen 261 NLSWSADGTQATCGTSTGQL 280 (737)
T ss_pred EEEEcCCCceeeccccCceE
Confidence 77788877777777776654
No 233
>KOG0280|consensus
Probab=98.25 E-value=6.4e-06 Score=49.64 Aligned_cols=80 Identities=13% Similarity=0.089 Sum_probs=55.4
Q ss_pred CCcCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135 1 MQKVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD 78 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~ 78 (106)
++...|+.+..||++. ++.+... ...|+.++.++.-+|..+.. ++||+.|-.+++||.++ ++++..-...
T Consensus 182 ytGgDD~~l~~~D~R~p~~~i~~n-~kvH~~GV~SI~ss~~~~~~--I~TGsYDe~i~~~DtRnm~kPl~~~~v~----- 253 (339)
T KOG0280|consen 182 YTGGDDGSLSCWDIRIPKTFIWHN-SKVHTSGVVSIYSSPPKPTY--IATGSYDECIRVLDTRNMGKPLFKAKVG----- 253 (339)
T ss_pred EecCCCceEEEEEecCCcceeeec-ceeeecceEEEecCCCCCce--EEEeccccceeeeehhcccCccccCccc-----
Confidence 3567899999999993 4332222 22356667777767765554 89999999999999995 6666443221
Q ss_pred CCeEEEEEcC
Q psy17135 79 ESILDVAFHP 88 (106)
Q Consensus 79 ~~v~~~~~~~ 88 (106)
++|+.+..+|
T Consensus 254 GGVWRi~~~p 263 (339)
T KOG0280|consen 254 GGVWRIKHHP 263 (339)
T ss_pred cceEEEEecc
Confidence 5777777776
No 234
>KOG4227|consensus
Probab=98.25 E-value=1.5e-05 Score=50.05 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=71.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chhee-ccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEI-TAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~-~~~~~~~~~~ 80 (106)
..++++|...|+.+.+.+..+.-......+..+.-+|..+. +++.+.++.|.+||.+..+ ....+ .+... ..
T Consensus 123 G~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~---~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~---~~ 196 (609)
T KOG4227|consen 123 GERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNT---LIVVTRAKLVSFIDNRDRQNPISLVLPANSG---KN 196 (609)
T ss_pred CCCcceeEeeecccceeeeeecccCcccceeecccCCCCce---EEEEecCceEEEEeccCCCCCCceeeecCCC---cc
Confidence 45789999999999988666654333345566777888777 7999999999999998765 33222 22221 67
Q ss_pred eEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
...+.|+|... +|++.+..+.+.+||
T Consensus 197 F~t~~F~P~~P~Li~~~~~~~G~~~~D 223 (609)
T KOG4227|consen 197 FYTAEFHPETPALILVNSETGGPNVFD 223 (609)
T ss_pred ceeeeecCCCceeEEeccccCCCCcee
Confidence 78889999554 578888888888886
No 235
>KOG1963|consensus
Probab=98.24 E-value=1.3e-05 Score=53.95 Aligned_cols=93 Identities=13% Similarity=0.252 Sum_probs=65.9
Q ss_pred ceEEEEeCccCce-eeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEee-CC-Cc--cchheeccccccCCCC
Q psy17135 7 SVIYIWTLLELQT-YARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWN-LD-NK--TCVQEITAHRKKFDES 80 (106)
Q Consensus 7 ~~i~iwd~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd-~~-~~--~~~~~~~~~~~~~~~~ 80 (106)
..+.+|+..+... ....... +|.-...+..++|.+.. ++++..||+|.+|. .. .. .....+..|. ..
T Consensus 181 ~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~---~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~----~~ 253 (792)
T KOG1963|consen 181 CKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERY---LAAGDSDGRILVWRDFGSSDDSETCTLLHWHH----DE 253 (792)
T ss_pred eeEEEEEecccceeeccchhhhhhcccceeEEeccccce---EEEeccCCcEEEEeccccccccccceEEEecc----cc
Confidence 4567787766441 1111111 13333566788888888 89999999999994 33 11 2245566787 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.+++|+++|.++.||+..+.+.+|.
T Consensus 254 V~~L~fS~~G~~LlSGG~E~VLv~Wq 279 (792)
T KOG1963|consen 254 VNSLSFSSDGAYLLSGGREGVLVLWQ 279 (792)
T ss_pred cceeEEecCCceEeecccceEEEEEe
Confidence 99999999999999999999998883
No 236
>KOG1064|consensus
Probab=98.20 E-value=1.5e-05 Score=57.93 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=67.1
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-----cc----------
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-----TC---------- 66 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-----~~---------- 66 (106)
+...||.|++|.-..++.+..+..... +.+..+.|+..++. +..+..||.+.+|..... +|
T Consensus 2225 tgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk---~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~F 2300 (2439)
T KOG1064|consen 2225 TGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNK---FGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRF 2300 (2439)
T ss_pred ecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCc---eeeeccCCceeecccCCcceeccccCCccccceee
Confidence 567899999999998888666654332 44444556665555 455666666666654311 00
Q ss_pred ----------------------------hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 67 ----------------------------VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 ----------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
......| ..++++++|-|....++||+++|.|.+||
T Consensus 2301 i~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H----~~gaT~l~~~P~~qllisggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2301 IGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCH----DGGATVLAYAPKHQLLISGGRKGEVCLFD 2364 (2439)
T ss_pred eehhhhccccCCCCCcccchhcccCcccceeeeec----CCCceEEEEcCcceEEEecCCcCcEEEee
Confidence 0001223 37899999999999999999999999998
No 237
>KOG1240|consensus
Probab=98.19 E-value=1.3e-05 Score=56.13 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=51.0
Q ss_pred ccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCcc-------chheeccccccCCCCeEEEEEcCCCCEEEE
Q psy17135 24 DCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKT-------CVQEITAHRKKFDESILDVAFHPSKPFIAS 95 (106)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s 95 (106)
..+.|...+.....++.. .. ++||+.||+|++|+++.-. ...++.... ..+.++...+.+..+|.
T Consensus 1043 hL~Ehs~~v~k~a~s~~~~s~---FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~----sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSL---FVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEG----SRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred hhhhccccccceeecCCCCce---EEEecCCceEEEeeehhhhcCcceeeeeEEEeccC----CceEEEEeccCCCeEEE
Confidence 333344444444444444 44 8999999999999987421 111222122 68889999999999999
Q ss_pred ecCCCeEEEc
Q psy17135 96 AGADGLAKVF 105 (106)
Q Consensus 96 ~~~d~~i~iw 105 (106)
++.||.|++.
T Consensus 1116 ~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1116 STKDGSVRVL 1125 (1431)
T ss_pred EcCCCeEEEE
Confidence 9999999875
No 238
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.10 E-value=0.00011 Score=47.09 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=55.4
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
+..|.+||+.+++........ .......|+|++... +++.+.++ .+.+||+++++.. .+..+. ..+..
T Consensus 222 ~~~i~i~dl~~G~~~~l~~~~---~~~~~~~~SPDG~~L--a~~~~~~g~~~I~~~d~~tg~~~-~lt~~~----~~~~~ 291 (429)
T PRK03629 222 RSALVIQTLANGAVRQVASFP---RHNGAPAFSPDGSKL--AFALSKTGSLNLYVMDLASGQIR-QVTDGR----SNNTE 291 (429)
T ss_pred CcEEEEEECCCCCeEEccCCC---CCcCCeEECCCCCEE--EEEEcCCCCcEEEEEECCCCCEE-EccCCC----CCcCc
Confidence 457888998887652222221 223457899998874 22333344 5888999877643 343333 46678
Q ss_pred EEEcCCCCEEEEecC-CCeEEEc
Q psy17135 84 VAFHPSKPFIASAGA-DGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~-d~~i~iw 105 (106)
..|+|+++.++..+. ++...+|
T Consensus 292 ~~wSPDG~~I~f~s~~~g~~~Iy 314 (429)
T PRK03629 292 PTWFPDSQNLAYTSDQAGRPQVY 314 (429)
T ss_pred eEECCCCCEEEEEeCCCCCceEE
Confidence 899999998765553 4444444
No 239
>KOG1064|consensus
Probab=98.09 E-value=4.3e-06 Score=60.48 Aligned_cols=85 Identities=9% Similarity=0.230 Sum_probs=62.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..++.+.+||..-.....-.. ..|..+...+.+.|..+. +.+|+.+|.|++||++..+...+++.
T Consensus 2312 ~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~ql---lisggr~G~v~l~D~rqrql~h~~~~----------- 2376 (2439)
T KOG1064|consen 2312 SDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQL---LISGGRKGEVCLFDIRQRQLRHTFQA----------- 2376 (2439)
T ss_pred CCCCcccchhcccCcccceee-eecCCCceEEEEcCcceE---EEecCCcCcEEEeehHHHHHHHHhhh-----------
Confidence 456788999975432211222 224556778899998888 89999999999999998876665543
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+. ...++++++..|.++||+
T Consensus 2377 --~~-~~~~f~~~ss~g~ikIw~ 2396 (2439)
T KOG1064|consen 2377 --LD-TREYFVTGSSEGNIKIWR 2396 (2439)
T ss_pred --hh-hhheeeccCcccceEEEE
Confidence 22 356788999999999995
No 240
>KOG3914|consensus
Probab=98.08 E-value=3.2e-05 Score=48.17 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=55.7
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|-+-...+.++|+++. +.++..|..|++=.......+..+ -+|. ..|..++.-++ ..|+|+|.|+++++||
T Consensus 150 hvSml~dVavS~D~~~---IitaDRDEkIRvs~ypa~f~IesfclGH~----eFVS~isl~~~-~~LlS~sGD~tlr~Wd 221 (390)
T KOG3914|consen 150 HVSMLLDVAVSPDDQF---IITADRDEKIRVSRYPATFVIESFCLGHK----EFVSTISLTDN-YLLLSGSGDKTLRLWD 221 (390)
T ss_pred hhhhhheeeecCCCCE---EEEecCCceEEEEecCcccchhhhccccH----hheeeeeeccC-ceeeecCCCCcEEEEe
Confidence 3445566889998877 899999999998777665555555 3577 88888888765 4589999999999997
No 241
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.08 E-value=6.6e-05 Score=48.09 Aligned_cols=90 Identities=13% Similarity=0.197 Sum_probs=55.6
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC--CCccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL--DNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
...|.+||+.+++....... ........|+|++... +++.+.++...+|.+ ..+. ...+..+. .....
T Consensus 219 ~~~I~~~dl~~g~~~~l~~~---~g~~~~~~~SPDG~~l--a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~----~~~~~ 288 (427)
T PRK02889 219 KPVVYVHDLATGRRRVVANF---KGSNSAPAWSPDGRTL--AVALSRDGNSQIYTVNADGSG-LRRLTQSS----GIDTE 288 (427)
T ss_pred CcEEEEEECCCCCEEEeecC---CCCccceEECCCCCEE--EEEEccCCCceEEEEECCCCC-cEECCCCC----CCCcC
Confidence 35699999998876322222 2234467899998873 346677777777754 3333 44554444 44556
Q ss_pred EEEcCCCCEEEEec-CCCeEEEc
Q psy17135 84 VAFHPSKPFIASAG-ADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~-~d~~i~iw 105 (106)
..|+||++.++..+ .++...+|
T Consensus 289 ~~wSpDG~~l~f~s~~~g~~~Iy 311 (427)
T PRK02889 289 PFFSPDGRSIYFTSDRGGAPQIY 311 (427)
T ss_pred eEEcCCCCEEEEEecCCCCcEEE
Confidence 78999999876544 44555554
No 242
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.06 E-value=0.00013 Score=46.84 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=55.0
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
...|.+||+.+++....... ........|+|.+... +++.+.++ .+.+||+.+++. ..+..+. .....
T Consensus 227 ~~~l~~~dl~~g~~~~l~~~---~g~~~~~~~SpDG~~l--~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~----~~~~~ 296 (433)
T PRK04922 227 RSAIYVQDLATGQRELVASF---RGINGAPSFSPDGRRL--ALTLSRDGNPEIYVMDLGSRQL-TRLTNHF----GIDTE 296 (433)
T ss_pred CcEEEEEECCCCCEEEeccC---CCCccCceECCCCCEE--EEEEeCCCCceEEEEECCCCCe-EECccCC----CCccc
Confidence 45789999988775322222 2223357899988874 23444444 588999987763 3444443 34467
Q ss_pred EEEcCCCCEEEEec-CCCeEEE
Q psy17135 84 VAFHPSKPFIASAG-ADGLAKV 104 (106)
Q Consensus 84 ~~~~~~~~~~~s~~-~d~~i~i 104 (106)
.+|+|+++.++.++ .++...+
T Consensus 297 ~~~spDG~~l~f~sd~~g~~~i 318 (433)
T PRK04922 297 PTWAPDGKSIYFTSDRGGRPQI 318 (433)
T ss_pred eEECCCCCEEEEEECCCCCceE
Confidence 79999999876554 4444333
No 243
>KOG4532|consensus
Probab=98.05 E-value=9.6e-05 Score=44.41 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=67.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~ 80 (106)
+.+|.++++.++..+.. ++..+..+-....+.+++++.. +++.+....|..|.++... .++...+.. ++.
T Consensus 134 ~sndht~k~~~~~~~s~--~~~~h~~~~~~ns~~~snd~~~---~~~Vgds~~Vf~y~id~~sey~~~~~~a~t---~D~ 205 (344)
T KOG4532|consen 134 ASNDHTGKTMVVSGDSN--KFAVHNQNLTQNSLHYSNDPSW---GSSVGDSRRVFRYAIDDESEYIENIYEAPT---SDH 205 (344)
T ss_pred ccCCcceeEEEEecCcc--cceeeccccceeeeEEcCCCce---EEEecCCCcceEEEeCCccceeeeeEeccc---CCC
Confidence 56788888888875554 3333212222556778888877 6788888899999887643 334233333 256
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
-++..|+.....+|++..||++.|||
T Consensus 206 gF~~S~s~~~~~FAv~~Qdg~~~I~D 231 (344)
T KOG4532|consen 206 GFYNSFSENDLQFAVVFQDGTCAIYD 231 (344)
T ss_pred ceeeeeccCcceEEEEecCCcEEEEE
Confidence 68889999888999999999999997
No 244
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.02 E-value=0.00017 Score=46.34 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=53.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+..|.+||+.+++... +.. .........|+|++... +++.+.++. |.+||+.++.. ..+..+. ....
T Consensus 224 g~~~i~~~dl~~g~~~~-l~~--~~g~~~~~~~SPDG~~l--a~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~----~~~~ 293 (435)
T PRK05137 224 GRPRVYLLDLETGQREL-VGN--FPGMTFAPRFSPDGRKV--VMSLSQGGNTDIYTMDLRSGTT-TRLTDSP----AIDT 293 (435)
T ss_pred CCCEEEEEECCCCcEEE-eec--CCCcccCcEECCCCCEE--EEEEecCCCceEEEEECCCCce-EEccCCC----CccC
Confidence 35789999998887622 221 12234467899988774 345555554 66778877653 4454444 4556
Q ss_pred EEEEcCCCCEEEEec
Q psy17135 83 DVAFHPSKPFIASAG 97 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~ 97 (106)
...|+|++..++..+
T Consensus 294 ~~~~spDG~~i~f~s 308 (435)
T PRK05137 294 SPSYSPDGSQIVFES 308 (435)
T ss_pred ceeEcCCCCEEEEEE
Confidence 789999999876554
No 245
>KOG3881|consensus
Probab=98.00 E-value=6.5e-05 Score=46.88 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=68.6
Q ss_pred ceEEEEeCccCceeeecccCCC-------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCC
Q psy17135 7 SVIYIWTLLELQTYARNDCPEL-------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFD 78 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~ 78 (106)
..+.|||+...+.+........ ......+.|.+...... |+++..-+.+++||.+.+ +++.++...+
T Consensus 173 n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~-fat~T~~hqvR~YDt~~qRRPV~~fd~~E---- 247 (412)
T KOG3881|consen 173 NELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYK-FATITRYHQVRLYDTRHQRRPVAQFDFLE---- 247 (412)
T ss_pred cceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCce-EEEEecceeEEEecCcccCcceeEecccc----
Confidence 4578999987766444333211 11234456666633222 699999999999999975 5788887777
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.++...|++..+.++..-+.+..||
T Consensus 248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD 275 (412)
T KOG3881|consen 248 NPISSTGLTPSGNFIYTGNTKGQLAKFD 275 (412)
T ss_pred CcceeeeecCCCcEEEEecccchhheec
Confidence 7999999999999999998888777665
No 246
>KOG2695|consensus
Probab=97.99 E-value=1.8e-05 Score=48.78 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=52.1
Q ss_pred CCcCCCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 1 MQKVPSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
|.+.=+|+|.+||++--++ +..+..+.... .. +.++-..+.+. +++++.|...++|.++.|..+.+++......
T Consensus 315 maS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~-a~-l~~~v~~eeg~-I~s~GdDcytRiWsl~~ghLl~tipf~~s~~ 391 (425)
T KOG2695|consen 315 MASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS-AY-LPAHVKEEEGS-IFSVGDDCYTRIWSLDSGHLLCTIPFPYSAS 391 (425)
T ss_pred eeccCcCceeEeeehhhhcccceeeeecccccc-cc-cccccccccce-EEEccCeeEEEEEecccCceeeccCCCCccc
Confidence 4556689999999987665 44444422111 11 11222222222 5789999999999999999888877654322
Q ss_pred CCCeEEEEEc
Q psy17135 78 DESILDVAFH 87 (106)
Q Consensus 78 ~~~v~~~~~~ 87 (106)
+..+..++|.
T Consensus 392 e~d~~sv~~~ 401 (425)
T KOG2695|consen 392 EVDIPSVAFD 401 (425)
T ss_pred cccccceehh
Confidence 2455666664
No 247
>KOG4190|consensus
Probab=97.99 E-value=1.1e-05 Score=52.82 Aligned_cols=66 Identities=26% Similarity=0.405 Sum_probs=49.9
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
+..+......+. +++++.|++|++|.++.. .|-.++++|. ..|..+.|-.+.++++++ |+.+++
T Consensus 738 iRai~AidNENS---FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk----k~i~~igfL~~lr~i~Sc--D~giHl 808 (1034)
T KOG4190|consen 738 IRAIAAIDNENS---FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK----KPIHDIGFLADLRSIASC--DGGIHL 808 (1034)
T ss_pred hHHHHhcccccc---eeeccCCceEEEEEeccccCccccceeeeEhhhcc----Ccccceeeeeccceeeec--cCccee
Confidence 334444444555 799999999999998742 2445667787 799999998888888776 888999
Q ss_pred cC
Q psy17135 105 FV 106 (106)
Q Consensus 105 wd 106 (106)
||
T Consensus 809 WD 810 (1034)
T KOG4190|consen 809 WD 810 (1034)
T ss_pred ec
Confidence 97
No 248
>KOG4497|consensus
Probab=97.96 E-value=1.6e-05 Score=48.83 Aligned_cols=93 Identities=13% Similarity=0.076 Sum_probs=69.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
++-.+.|-|..+.+....+.+ -..+..+.|..++... +.....++.|++|++....-...+.... +++..+
T Consensus 27 ~~yrlviRd~~tlq~~qlf~c---ldki~yieW~ads~~i--lC~~yk~~~vqvwsl~Qpew~ckIdeg~----agls~~ 97 (447)
T KOG4497|consen 27 SRYRLVIRDSETLQLHQLFLC---LDKIVYIEWKADSCHI--LCVAYKDPKVQVWSLVQPEWYCKIDEGQ----AGLSSI 97 (447)
T ss_pred eeeEEEEeccchhhHHHHHHH---HHHhhheeeeccceee--eeeeeccceEEEEEeecceeEEEeccCC----Ccceee
Confidence 344567777777776555555 2346667888777765 5667888899999998776666676666 789999
Q ss_pred EEcCCCCE-EEEecCCCeEEEcC
Q psy17135 85 AFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
.|||+|+. +.++..+-+|.+|.
T Consensus 98 ~WSPdgrhiL~tseF~lriTVWS 120 (447)
T KOG4497|consen 98 SWSPDGRHILLTSEFDLRITVWS 120 (447)
T ss_pred eECCCcceEeeeecceeEEEEEE
Confidence 99999976 66777888888883
No 249
>KOG2321|consensus
Probab=97.96 E-value=3.5e-05 Score=50.38 Aligned_cols=95 Identities=11% Similarity=0.096 Sum_probs=62.1
Q ss_pred CCceEEEEeCccCceeeecccCCC---------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPEL---------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
.+|.|..||.++......+....+ ...+.++.|...+-. ++.|..+|.+.++|+++.+++..-. |..
T Consensus 195 ~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~---~aVGts~G~v~iyDLRa~~pl~~kd-h~~ 270 (703)
T KOG2321|consen 195 EDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLH---VAVGTSTGSVLIYDLRASKPLLVKD-HGY 270 (703)
T ss_pred cCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCcee---EEeeccCCcEEEEEcccCCceeecc-cCC
Confidence 489999999987665444433221 112444666555444 8999999999999999988764332 221
Q ss_pred cCCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
+..|..+.|.+. +..++| .....++|||
T Consensus 271 --e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd 300 (703)
T KOG2321|consen 271 --ELPIKKLDWQDTDQQNKVVS-MDKRILKIWD 300 (703)
T ss_pred --ccceeeecccccCCCceEEe-cchHHhhhcc
Confidence 167888888774 333444 3466788886
No 250
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.95 E-value=0.00018 Score=46.24 Aligned_cols=91 Identities=11% Similarity=0.004 Sum_probs=56.4
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
...|.++|...... ..+.. +........|+|++....++.....+..|.+||+.+++. ..+.... ..+...+
T Consensus 181 ~~~l~~~d~dg~~~-~~lt~--~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~----g~~~~~~ 252 (435)
T PRK05137 181 IKRLAIMDQDGANV-RYLTD--GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFP----GMTFAPR 252 (435)
T ss_pred ceEEEEECCCCCCc-EEEec--CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCC----CcccCcE
Confidence 34788888865443 22222 233456688999988742211122346899999988764 3344444 5667889
Q ss_pred EcCCCCEE-EEecCCCeEEE
Q psy17135 86 FHPSKPFI-ASAGADGLAKV 104 (106)
Q Consensus 86 ~~~~~~~~-~s~~~d~~i~i 104 (106)
|+|++..+ ++.+.++...+
T Consensus 253 ~SPDG~~la~~~~~~g~~~I 272 (435)
T PRK05137 253 FSPDGRKVVMSLSQGGNTDI 272 (435)
T ss_pred ECCCCCEEEEEEecCCCceE
Confidence 99999876 46666665333
No 251
>KOG4640|consensus
Probab=97.94 E-value=3.8e-05 Score=50.54 Aligned_cols=68 Identities=12% Similarity=0.159 Sum_probs=56.9
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE-EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL-DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+..+.|+|.-.. +|.+.++|.+-+.-+. .+.+.+++.+. ..+. +++|.|||+.++.|-.||+|++.|
T Consensus 22 ~i~~~ewnP~~dL---iA~~t~~gelli~R~n-~qRlwtip~p~----~~v~~sL~W~~DGkllaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 22 NIKRIEWNPKMDL---IATRTEKGELLIHRLN-WQRLWTIPIPG----ENVTASLCWRPDGKLLAVGFKDGTIRLHD 90 (665)
T ss_pred ceEEEEEcCccch---hheeccCCcEEEEEec-cceeEeccCCC----CccceeeeecCCCCEEEEEecCCeEEEEE
Confidence 4566889998888 8999999998888776 67777777666 4555 999999999999999999999876
No 252
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.93 E-value=0.00031 Score=45.10 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=55.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|.++|...... ..+.. +........|+|++.. ++..+ ....+.+||+.+++.. .+.... ....
T Consensus 175 ~~~L~~~D~dG~~~-~~l~~--~~~~v~~p~wSPDG~~---la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~----g~~~ 243 (427)
T PRK02889 175 RYQLQISDADGQNA-QSALS--SPEPIISPAWSPDGTK---LAYVSFESKKPVVYVHDLATGRRR-VVANFK----GSNS 243 (427)
T ss_pred ccEEEEECCCCCCc-eEecc--CCCCcccceEcCCCCE---EEEEEccCCCcEEEEEECCCCCEE-EeecCC----CCcc
Confidence 34677777754332 12222 2334566889999877 33332 2345899999887643 233233 4556
Q ss_pred EEEEcCCCCEEE-EecCCCeEEEc
Q psy17135 83 DVAFHPSKPFIA-SAGADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~~~~~~-s~~~d~~i~iw 105 (106)
..+|+|++..++ +.+.++...+|
T Consensus 244 ~~~~SPDG~~la~~~~~~g~~~Iy 267 (427)
T PRK02889 244 APAWSPDGRTLAVALSRDGNSQIY 267 (427)
T ss_pred ceEECCCCCEEEEEEccCCCceEE
Confidence 789999998765 66777776665
No 253
>KOG0309|consensus
Probab=97.88 E-value=1.6e-05 Score=53.38 Aligned_cols=96 Identities=16% Similarity=0.215 Sum_probs=70.8
Q ss_pred CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCC
Q psy17135 2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDE 79 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~ 79 (106)
++.-|..+..||+++... +..... -+.....+.|+-.... +.+.+....+++||.+.| .++..+.+|. .
T Consensus 132 tcsvdt~vh~wd~rSp~~p~ys~~~--w~s~asqVkwnyk~p~---vlasshg~~i~vwd~r~gs~pl~s~K~~v----s 202 (1081)
T KOG0309|consen 132 TCSVDTYVHAWDMRSPHRPFYSTSS--WRSAASQVKWNYKDPN---VLASSHGNDIFVWDLRKGSTPLCSLKGHV----S 202 (1081)
T ss_pred eccccccceeeeccCCCcceeeeec--ccccCceeeecccCcc---hhhhccCCceEEEeccCCCcceEEecccc----e
Confidence 466788999999998654 122221 2345777889888777 556666678999999976 5677777777 7
Q ss_pred CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.+..++|.- ....+.+++.|++++.||
T Consensus 203 ~vn~~~fnr~~~s~~~s~~~d~tvkfw~ 230 (1081)
T KOG0309|consen 203 SVNSIDFNRFKYSEIMSSSNDGTVKFWD 230 (1081)
T ss_pred eeehHHHhhhhhhhhcccCCCCceeeec
Confidence 888888764 444588899999999996
No 254
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.80 E-value=0.00035 Score=44.91 Aligned_cols=89 Identities=10% Similarity=-0.049 Sum_probs=54.5
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|.+||...... ..+.. +........|+|.+.. ++..+ ....+.+||+.+++.. .+.... .....
T Consensus 184 ~~l~i~D~~g~~~-~~lt~--~~~~v~~p~wSpDg~~---la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~----g~~~~ 252 (433)
T PRK04922 184 YALQVADSDGYNP-QTILR--SAEPILSPAWSPDGKK---LAYVSFERGRSAIYVQDLATGQRE-LVASFR----GINGA 252 (433)
T ss_pred EEEEEECCCCCCc-eEeec--CCCccccccCCCCCCE---EEEEecCCCCcEEEEEECCCCCEE-EeccCC----CCccC
Confidence 4689999865443 22222 2334566789998887 44433 3356899999877642 233333 34457
Q ss_pred EEEcCCCCEE-EEecCCC--eEEEcC
Q psy17135 84 VAFHPSKPFI-ASAGADG--LAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~-~s~~~d~--~i~iwd 106 (106)
.+|+|++..+ ++.+.++ .+++||
T Consensus 253 ~~~SpDG~~l~~~~s~~g~~~Iy~~d 278 (433)
T PRK04922 253 PSFSPDGRRLALTLSRDGNPEIYVMD 278 (433)
T ss_pred ceECCCCCEEEEEEeCCCCceEEEEE
Confidence 8999999876 4555555 466553
No 255
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.78 E-value=0.00085 Score=42.68 Aligned_cols=81 Identities=19% Similarity=0.107 Sum_probs=49.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--CcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--CSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..|.+||+.+++....... ........|+|.+... +++.+.+ ..+.+|++.+++. ..+..+. ......
T Consensus 214 ~~i~v~d~~~g~~~~~~~~---~~~~~~~~~spDg~~l--~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~----~~~~~~ 283 (417)
T TIGR02800 214 PEIYVQDLATGQREKVASF---PGMNGAPAFSPDGSKL--AVSLSKDGNPDIYVMDLDGKQL-TRLTNGP----GIDTEP 283 (417)
T ss_pred cEEEEEECCCCCEEEeecC---CCCccceEECCCCCEE--EEEECCCCCccEEEEECCCCCE-EECCCCC----CCCCCE
Confidence 5799999988765222221 2234457889988763 3344444 3588888877653 3333333 334456
Q ss_pred EEcCCCCEEEEec
Q psy17135 85 AFHPSKPFIASAG 97 (106)
Q Consensus 85 ~~~~~~~~~~s~~ 97 (106)
.|+|+++.++..+
T Consensus 284 ~~s~dg~~l~~~s 296 (417)
T TIGR02800 284 SWSPDGKSIAFTS 296 (417)
T ss_pred EECCCCCEEEEEE
Confidence 8999998765544
No 256
>KOG1409|consensus
Probab=97.73 E-value=9.2e-05 Score=45.74 Aligned_cols=72 Identities=17% Similarity=0.308 Sum_probs=56.8
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.....+..|.+.... +.+|.+|..+-+||+-..+- ...+.+|. ..|..+.+-+-...++|++.|+.|-+|+
T Consensus 196 h~~~~~~l~Wd~~~~~---LfSg~~d~~vi~wdigg~~g~~~el~gh~----~kV~~l~~~~~t~~l~S~~edg~i~~w~ 268 (404)
T KOG1409|consen 196 HTGEVTCLKWDPGQRL---LFSGASDHSVIMWDIGGRKGTAYELQGHN----DKVQALSYAQHTRQLISCGEDGGIVVWN 268 (404)
T ss_pred cccceEEEEEcCCCcE---EEeccccCceEEEeccCCcceeeeeccch----hhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence 4455667788887776 89999999999999975543 34556677 7788887777778899999999999996
No 257
>KOG1334|consensus
Probab=97.70 E-value=7.3e-05 Score=48.00 Aligned_cols=70 Identities=13% Similarity=0.254 Sum_probs=55.0
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEE
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKV 104 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~i 104 (106)
|.+-+..+.|+..+.. +++++.|..|.+||+..++....+ .+|. ..|+-..|-| +...+++++.||.+++
T Consensus 141 H~GcVntV~FN~~Gd~---l~SgSDD~~vv~WdW~~~~~~l~f~SGH~----~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 141 HKGCVNTVHFNQRGDV---LASGSDDLQVVVWDWVSGSPKLSFESGHC----NNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred CCCccceeeecccCce---eeccCccceEEeehhhccCcccccccccc----cchhhhhccCCCCCcCceeccccCceee
Confidence 4555677888888877 899999999999999988765444 4566 7788778887 4556999999998875
No 258
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.70 E-value=0.0013 Score=42.62 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=62.4
Q ss_pred CCCc-eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 4 VPSS-VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+|| .+-|+|..+++. .+.... -+.+-.+...+.+.. ++.+.....+-+.|+.+++.--.-+... +-|+
T Consensus 378 t~dgD~l~iyd~~~~e~-kr~e~~--lg~I~av~vs~dGK~---~vvaNdr~el~vididngnv~~idkS~~----~lIt 447 (668)
T COG4946 378 TNDGDKLGIYDKDGGEV-KRIEKD--LGNIEAVKVSPDGKK---VVVANDRFELWVIDIDNGNVRLIDKSEY----GLIT 447 (668)
T ss_pred ccCCceEEEEecCCceE-EEeeCC--ccceEEEEEcCCCcE---EEEEcCceEEEEEEecCCCeeEeccccc----ceeE
Confidence 4566 788999988875 233322 233555666666666 7788877888888999987432223333 7899
Q ss_pred EEEEcCCCCEEEEecCCCe
Q psy17135 83 DVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~ 101 (106)
.+.|||+.+++|-+-.+|.
T Consensus 448 df~~~~nsr~iAYafP~gy 466 (668)
T COG4946 448 DFDWHPNSRWIAYAFPEGY 466 (668)
T ss_pred EEEEcCCceeEEEecCcce
Confidence 9999999999999988774
No 259
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.67 E-value=0.0017 Score=46.31 Aligned_cols=70 Identities=9% Similarity=0.013 Sum_probs=48.7
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc----------ccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR----------KKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
..+.+.+.+.. +++-..++.|++||..++...... +.. ...-.....++++++++.+++-+.+++|
T Consensus 807 ~Gvavd~dG~L---YVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I 882 (1057)
T PLN02919 807 LGVLCAKDGQI---YVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI 882 (1057)
T ss_pred ceeeEeCCCcE---EEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence 34556665543 688888999999999877643221 110 0001356788999999999999999999
Q ss_pred EEcC
Q psy17135 103 KVFV 106 (106)
Q Consensus 103 ~iwd 106 (106)
++||
T Consensus 883 rvid 886 (1057)
T PLN02919 883 RYLD 886 (1057)
T ss_pred EEEE
Confidence 9986
No 260
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.66 E-value=0.002 Score=40.57 Aligned_cols=94 Identities=6% Similarity=-0.044 Sum_probs=62.6
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---------CCCcEEEeeCCCccchheeccccccC
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---------HDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---------~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
++|.+.|..+++.+...... . .... ..+|++... .++.+ .+..|.+||..+.+.+..+....+.+
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G--~-~P~~-~~spDg~~l--yva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~ 100 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGG--F-LPNP-VVASDGSFF--AHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR 100 (352)
T ss_pred ceEEEEECCCCEEEEEEEcc--C-CCce-eECCCCCEE--EEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch
Confidence 88999999998886666542 1 1222 367776663 34445 57889999999999888887543100
Q ss_pred ---CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 78 ---DESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 78 ---~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
......++++|+++++..... +..+.+.|
T Consensus 101 ~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD 134 (352)
T TIGR02658 101 FLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVD 134 (352)
T ss_pred hhccCccceEEECCCCCEEEEecCCCCCEEEEEE
Confidence 123346789999998776552 45565543
No 261
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.62 E-value=0.0015 Score=42.07 Aligned_cols=92 Identities=11% Similarity=0.016 Sum_probs=54.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF 86 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 86 (106)
..|.++|....... .+.. +........|+|++....++.....+..+.+|++.+++.. .+.... .......|
T Consensus 179 ~~l~~~d~dg~~~~-~lt~--~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~----~~~~~~~~ 250 (429)
T PRK03629 179 YELRVSDYDGYNQF-VVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFP----RHNGAPAF 250 (429)
T ss_pred eeEEEEcCCCCCCE-Eeec--CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCC----CCcCCeEE
Confidence 46888988765441 2222 1234566889999987433111233457889999877532 222222 33456799
Q ss_pred cCCCCEEEEe-cCCC--eEEEcC
Q psy17135 87 HPSKPFIASA-GADG--LAKVFV 106 (106)
Q Consensus 87 ~~~~~~~~s~-~~d~--~i~iwd 106 (106)
+|+++.++.. +.++ .+.+||
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d 273 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMD 273 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEE
Confidence 9999987643 4454 365553
No 262
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.61 E-value=0.0013 Score=41.60 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=59.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc---CCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK---FDES 80 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~ 80 (106)
..||.|.++|+.+++.+..... ......+.+++.+... +++....+.+.++|.++.+.++.+...... ...+
T Consensus 55 ~rdg~vsviD~~~~~~v~~i~~---G~~~~~i~~s~DG~~~--~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~R 129 (369)
T PF02239_consen 55 NRDGTVSVIDLATGKVVATIKV---GGNPRGIAVSPDGKYV--YVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESR 129 (369)
T ss_dssp ETTSEEEEEETTSSSEEEEEE----SSEEEEEEE--TTTEE--EEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---
T ss_pred cCCCeEEEEECCcccEEEEEec---CCCcceEEEcCCCCEE--EEEecCCCceeEeccccccceeecccccccccccCCC
Confidence 3689999999999998777655 2235668888888873 445567899999999998888877543210 1146
Q ss_pred eEEEEEcCCCCEE-EEecCCCeEEE
Q psy17135 81 ILDVAFHPSKPFI-ASAGADGLAKV 104 (106)
Q Consensus 81 v~~~~~~~~~~~~-~s~~~d~~i~i 104 (106)
+..+..+|....+ ++--..+.|.+
T Consensus 130 v~aIv~s~~~~~fVv~lkd~~~I~v 154 (369)
T PF02239_consen 130 VAAIVASPGRPEFVVNLKDTGEIWV 154 (369)
T ss_dssp EEEEEE-SSSSEEEEEETTTTEEEE
T ss_pred ceeEEecCCCCEEEEEEccCCeEEE
Confidence 7777777877744 44444455543
No 263
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.58 E-value=0.0025 Score=41.32 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=52.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..|.+||+.+++....... ........|+|++... +++.+.++. |.++|+.+++. ..+..+. ......
T Consensus 242 ~~L~~~dl~tg~~~~lt~~---~g~~~~~~wSPDG~~L--a~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~----~~~~~p 311 (448)
T PRK04792 242 AEIFVQDIYTQVREKVTSF---PGINGAPRFSPDGKKL--ALVLSKDGQPEIYVVDIATKAL-TRITRHR----AIDTEP 311 (448)
T ss_pred cEEEEEECCCCCeEEecCC---CCCcCCeeECCCCCEE--EEEEeCCCCeEEEEEECCCCCe-EECccCC----CCccce
Confidence 4688888887765222222 1122356899988874 334555554 66778876653 3444443 455677
Q ss_pred EEcCCCCEEEE-ecCCCeEEE
Q psy17135 85 AFHPSKPFIAS-AGADGLAKV 104 (106)
Q Consensus 85 ~~~~~~~~~~s-~~~d~~i~i 104 (106)
.|+|+++.++. +..++...+
T Consensus 312 ~wSpDG~~I~f~s~~~g~~~I 332 (448)
T PRK04792 312 SWHPDGKSLIFTSERGGKPQI 332 (448)
T ss_pred EECCCCCEEEEEECCCCCceE
Confidence 89999987644 444444333
No 264
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.57 E-value=0.0026 Score=40.51 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=52.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
+..|.+||+.+++.. .+.. +........|+|.+... +++....+ .|.++++.+++. ..+..+. .....
T Consensus 257 ~~~i~~~d~~~~~~~-~l~~--~~~~~~~~~~s~dg~~l--~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~----~~~~~ 326 (417)
T TIGR02800 257 NPDIYVMDLDGKQLT-RLTN--GPGIDTEPSWSPDGKSI--AFTSDRGGSPQIYMMDADGGEV-RRLTFRG----GYNAS 326 (417)
T ss_pred CccEEEEECCCCCEE-ECCC--CCCCCCCEEECCCCCEE--EEEECCCCCceEEEEECCCCCE-EEeecCC----CCccC
Confidence 346888888876642 2221 12223346788877763 23333333 466777766553 3333333 45667
Q ss_pred EEEcCCCCEEEEecCCC---eEEEc
Q psy17135 84 VAFHPSKPFIASAGADG---LAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~---~i~iw 105 (106)
..|+|++..++.++.++ .+.++
T Consensus 327 ~~~spdg~~i~~~~~~~~~~~i~~~ 351 (417)
T TIGR02800 327 PSWSPDGDLIAFVHREGGGFNIAVM 351 (417)
T ss_pred eEECCCCCEEEEEEccCCceEEEEE
Confidence 78999999887776654 45554
No 265
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.56 E-value=0.0028 Score=40.69 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=50.7
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..|.+||+.+++....... ........|+|++... +++.+.++ .+.++|+.+++. ..+..+. ......
T Consensus 223 ~~l~~~~l~~g~~~~l~~~---~g~~~~~~~SpDG~~l--a~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~----~~~~~~ 292 (430)
T PRK00178 223 PRIFVQNLDTGRREQITNF---EGLNGAPAWSPDGSKL--AFVLSKDGNPEIYVMDLASRQL-SRVTNHP----AIDTEP 292 (430)
T ss_pred CEEEEEECCCCCEEEccCC---CCCcCCeEECCCCCEE--EEEEccCCCceEEEEECCCCCe-EEcccCC----CCcCCe
Confidence 4688889888765222221 1223357899988874 23444444 577789887653 3344443 445567
Q ss_pred EEcCCCCEEEE-ecCCCe
Q psy17135 85 AFHPSKPFIAS-AGADGL 101 (106)
Q Consensus 85 ~~~~~~~~~~s-~~~d~~ 101 (106)
.|+|++..++. +..++.
T Consensus 293 ~~spDg~~i~f~s~~~g~ 310 (430)
T PRK00178 293 FWGKDGRTLYFTSDRGGK 310 (430)
T ss_pred EECCCCCEEEEEECCCCC
Confidence 89999987644 434443
No 266
>KOG4190|consensus
Probab=97.51 E-value=0.00027 Score=46.62 Aligned_cols=103 Identities=9% Similarity=0.079 Sum_probs=67.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-ccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-KKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~v~ 82 (106)
+.||-|++||--.++++......-.++....+.-.+.-....+++-++...+|+++|.+.+.-...+.... .....-+.
T Consensus 801 ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R 880 (1034)
T KOG4190|consen 801 SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTR 880 (1034)
T ss_pred eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhee
Confidence 46899999999888876544332222333344445553444344556888999999999876444433211 00115678
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++.-+.|++++.+-.+|++.+-|
T Consensus 881 ~iaVa~~GN~lAa~LSnGci~~LD 904 (1034)
T KOG4190|consen 881 AIAVADKGNKLAAALSNGCIAILD 904 (1034)
T ss_pred EEEeccCcchhhHHhcCCcEEEEe
Confidence 899999999999999888876643
No 267
>KOG1275|consensus
Probab=97.45 E-value=0.00042 Score=47.82 Aligned_cols=96 Identities=8% Similarity=0.103 Sum_probs=68.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccc-hheeccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTC-VQEITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~-~~~~~~~~~~~~~~v 81 (106)
..|..|++||++..+.+.+...+. +.--+.|+|.-... ++.++..|...+.|..+ +.+ ......++. +..+
T Consensus 243 ~~D~FvkVYDLRmmral~PI~~~~---~P~flrf~Psl~t~--~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~--~s~i 315 (1118)
T KOG1275|consen 243 AMDPFVKVYDLRMMRALSPIQFPY---GPQFLRFHPSLTTR--LAVTSQSGQFQFVDTATLSNPPAGVKMVNPN--GSGI 315 (1118)
T ss_pred cccchhhhhhhhhhhccCCccccc---Cchhhhhcccccce--EEEEecccceeeccccccCCCccceeEEccC--CCcc
Confidence 458889999999999877776632 33446778875554 67888889999888332 222 222222221 1568
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+++++..++-+..+|.|.+|.
T Consensus 316 ~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 316 SAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeEEecCCCceEEEecccCcEeeec
Confidence 9999999999999999999999983
No 268
>KOG3914|consensus
Probab=97.43 E-value=0.0023 Score=40.27 Aligned_cols=68 Identities=28% Similarity=0.403 Sum_probs=50.1
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
...+.+........+.-..+....+.+|....+. ...+-+|. ..+..++++||.+.++++.+|..|++
T Consensus 110 ~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhv----Sml~dVavS~D~~~IitaDRDEkIRv 177 (390)
T KOG3914|consen 110 PTAISFIREDTSVLVADKAGDVYSFDILSADSGR-CEPILGHV----SMLLDVAVSPDDQFIITADRDEKIRV 177 (390)
T ss_pred cceeeeeeccceEEEEeecCCceeeeeecccccC-cchhhhhh----hhhheeeecCCCCEEEEecCCceEEE
Confidence 4456666666665444455666677777766544 34455687 89999999999999999999999986
No 269
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.43 E-value=0.0032 Score=40.47 Aligned_cols=88 Identities=15% Similarity=-0.016 Sum_probs=50.7
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC--CCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH--DCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.|.++|...+.. ..... +........|+|.+....+ +... ...+.+|++.+++.. .+.... .......
T Consensus 180 ~l~~~d~~g~~~-~~l~~--~~~~~~~p~wSpDG~~la~--~s~~~~~~~l~~~~l~~g~~~-~l~~~~----g~~~~~~ 249 (430)
T PRK00178 180 TLQRSDYDGARA-VTLLQ--SREPILSPRWSPDGKRIAY--VSFEQKRPRIFVQNLDTGRRE-QITNFE----GLNGAPA 249 (430)
T ss_pred EEEEECCCCCCc-eEEec--CCCceeeeeECCCCCEEEE--EEcCCCCCEEEEEECCCCCEE-EccCCC----CCcCCeE
Confidence 577788875543 12221 1233456789999887322 2222 245888899877542 232222 3445688
Q ss_pred EcCCCCEEE-EecCCCe--EEEc
Q psy17135 86 FHPSKPFIA-SAGADGL--AKVF 105 (106)
Q Consensus 86 ~~~~~~~~~-s~~~d~~--i~iw 105 (106)
|+|+++.++ +...++. +.++
T Consensus 250 ~SpDG~~la~~~~~~g~~~Iy~~ 272 (430)
T PRK00178 250 WSPDGSKLAFVLSKDGNPEIYVM 272 (430)
T ss_pred ECCCCCEEEEEEccCCCceEEEE
Confidence 999998765 5555553 4443
No 270
>KOG1409|consensus
Probab=97.41 E-value=0.00059 Score=42.37 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=41.9
Q ss_pred CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135 1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK 64 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~ 64 (106)
|.++.|..+.+||+-..+- .....+.|+..+..+.+.+.... +.+++.||.|-+|+++..
T Consensus 213 fSg~~d~~vi~wdigg~~g-~~~el~gh~~kV~~l~~~~~t~~---l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 213 FSGASDHSVIMWDIGGRKG-TAYELQGHNDKVQALSYAQHTRQ---LISCGEDGGIVVWNMNVK 272 (404)
T ss_pred EeccccCceEEEeccCCcc-eeeeeccchhhhhhhhhhhhhee---eeeccCCCeEEEEeccce
Confidence 4577899999999864333 13344445555555666665655 799999999999997743
No 271
>KOG2315|consensus
Probab=97.39 E-value=0.0043 Score=40.74 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=63.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
...++++++++...+...+.. .+.+..+.|+|.+....+ +-|-+-..+.++|++ +.++..+. + +.-+++
T Consensus 249 GEq~Lyll~t~g~s~~V~L~k---~GPVhdv~W~~s~~EF~V-vyGfMPAkvtifnlr-~~~v~df~--e----gpRN~~ 317 (566)
T KOG2315|consen 249 GEQTLYLLATQGESVSVPLLK---EGPVHDVTWSPSGREFAV-VYGFMPAKVTIFNLR-GKPVFDFP--E----GPRNTA 317 (566)
T ss_pred ccceEEEEEecCceEEEecCC---CCCceEEEECCCCCEEEE-EEecccceEEEEcCC-CCEeEeCC--C----CCccce
Confidence 356778888875454333332 456788999999876433 567888889999996 55554443 2 344677
Q ss_pred EEcCCCCEEEEecCC---CeEEEcC
Q psy17135 85 AFHPSKPFIASAGAD---GLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d---~~i~iwd 106 (106)
-|+|.|++++-++.+ |.+-+||
T Consensus 318 ~fnp~g~ii~lAGFGNL~G~mEvwD 342 (566)
T KOG2315|consen 318 FFNPHGNIILLAGFGNLPGDMEVWD 342 (566)
T ss_pred EECCCCCEEEEeecCCCCCceEEEe
Confidence 899999998777755 6788887
No 272
>KOG4532|consensus
Probab=97.35 E-value=0.0093 Score=36.25 Aligned_cols=58 Identities=12% Similarity=0.007 Sum_probs=39.8
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEEEEcCCCC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDVAFHPSKP 91 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 91 (106)
..-+..|+..... +++++.||++.|||++. +.+.......+.-|.+.+..+.|+|.+.
T Consensus 205 ~gF~~S~s~~~~~---FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~ 263 (344)
T KOG4532|consen 205 HGFYNSFSENDLQ---FAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGL 263 (344)
T ss_pred CceeeeeccCcce---EEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCc
Confidence 3445667766666 79999999999999986 4454443322222337889999997543
No 273
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.33 E-value=0.0068 Score=39.10 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=50.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
+..|.++|+.+++....... ........|+|++....+..+...+..+.++|+.++. ...+.... .......
T Consensus 212 ~~~Iyv~dl~tg~~~~lt~~---~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~----~~d~~p~ 283 (419)
T PRK04043 212 KPTLYKYNLYTGKKEKIASS---QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYP----GIDVNGN 283 (419)
T ss_pred CCEEEEEECCCCcEEEEecC---CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCC----CccCccE
Confidence 46788888888776322222 2222346789988775332333334567777887665 34444333 2233457
Q ss_pred EcCCCCEE-EEecCCCe
Q psy17135 86 FHPSKPFI-ASAGADGL 101 (106)
Q Consensus 86 ~~~~~~~~-~s~~~d~~ 101 (106)
|+||++.+ +++...+.
T Consensus 284 ~SPDG~~I~F~Sdr~g~ 300 (419)
T PRK04043 284 FVEDDKRIVFVSDRLGY 300 (419)
T ss_pred ECCCCCEEEEEECCCCC
Confidence 99999864 44444444
No 274
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.33 E-value=0.0029 Score=39.92 Aligned_cols=90 Identities=10% Similarity=-0.014 Sum_probs=54.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.||.+..+|..+++.+...... ........ ...+.. ++.++.+|.+.++|..+++.+..+..+. ..+...
T Consensus 287 ~~G~l~~~d~~tG~~~W~~~~~-~~~~~ssp--~i~g~~---l~~~~~~G~l~~~d~~tG~~~~~~~~~~----~~~~~s 356 (377)
T TIGR03300 287 ADGVVVALDRRSGSELWKNDEL-KYRQLTAP--AVVGGY---LVVGDFEGYLHWLSREDGSFVARLKTDG----SGIASP 356 (377)
T ss_pred CCCeEEEEECCCCcEEEccccc-cCCccccC--EEECCE---EEEEeCCCEEEEEECCCCCEEEEEEcCC----CccccC
Confidence 5788888998888775443211 01111111 112333 6788899999999999999887776554 333222
Q ss_pred EEcCCCCEEEEecCCCeEEEc
Q psy17135 85 AFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iw 105 (106)
-...+ ..++.++.||.+..|
T Consensus 357 p~~~~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 357 PVVVG-DGLLVQTRDGDLYAF 376 (377)
T ss_pred CEEEC-CEEEEEeCCceEEEe
Confidence 11223 357788889988765
No 275
>KOG3617|consensus
Probab=97.28 E-value=0.00068 Score=46.86 Aligned_cols=68 Identities=6% Similarity=0.038 Sum_probs=54.7
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..++.|+|..-. ++.|=.-|.+.+|...+.+.-.....|+ ..+..+.|||+|..+.++..-|.+.+|.
T Consensus 62 atSLCWHpe~~v---La~gwe~g~~~v~~~~~~e~htv~~th~----a~i~~l~wS~~G~~l~t~d~~g~v~lwr 129 (1416)
T KOG3617|consen 62 ATSLCWHPEEFV---LAQGWEMGVSDVQKTNTTETHTVVETHP----APIQGLDWSHDGTVLMTLDNPGSVHLWR 129 (1416)
T ss_pred hhhhccChHHHH---HhhccccceeEEEecCCceeeeeccCCC----CCceeEEecCCCCeEEEcCCCceeEEEE
Confidence 455788887766 7888888999999876655333344566 8999999999999999999999999984
No 276
>KOG3621|consensus
Probab=97.26 E-value=0.0022 Score=43.14 Aligned_cols=97 Identities=5% Similarity=0.021 Sum_probs=62.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-ecccc-ccCCCCe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHR-KKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~-~~~~~~v 81 (106)
...|.+.+|+-..++....... ..+.....+..++.... ++.|+..|.|.++.+..+.+-.. +..+. .+|...|
T Consensus 52 sS~G~lyl~~R~~~~~~~~~~~-~~~~~~~~~~vs~~e~l---vAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rV 127 (726)
T KOG3621|consen 52 SSAGSVYLYNRHTGEMRKLKNE-GATGITCVRSVSSVEYL---VAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRV 127 (726)
T ss_pred cccceEEEEecCchhhhccccc-CccceEEEEEecchhHh---hhhhcCCceEEeehhhccCCCcceeeccccccCCceE
Confidence 3457788888776665222111 12223344555666655 78889999999998876543221 11111 1133899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEE
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
+++.|++++..+.+|...|+|..
T Consensus 128 Tal~Ws~~~~k~ysGD~~Gkv~~ 150 (726)
T KOG3621|consen 128 TALEWSKNGMKLYSGDSQGKVVL 150 (726)
T ss_pred EEEEecccccEEeecCCCceEEE
Confidence 99999999999999999998764
No 277
>KOG1912|consensus
Probab=97.22 E-value=0.0066 Score=41.80 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=63.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCc-eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNIS-LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.|.|.+||...+.. ....+++...+-.+.|.+..... -+++.-....++-+|+..+|+......... ....|+
T Consensus 88 ~GrIil~d~~~~s~--~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~----~iLs~f 161 (1062)
T KOG1912|consen 88 SGRIILVDFVLASV--INWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH----EILSCF 161 (1062)
T ss_pred cCcEEEEEehhhhh--hhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCC----cceeee
Confidence 58899999988776 55555566666667887765544 335565666789999999998776665444 466678
Q ss_pred EEcC-CCCEEEEecCCCeEE
Q psy17135 85 AFHP-SKPFIASAGADGLAK 103 (106)
Q Consensus 85 ~~~~-~~~~~~s~~~d~~i~ 103 (106)
.+.| +.+.+...+..|.+.
T Consensus 162 ~~DPfd~rh~~~l~s~g~vl 181 (1062)
T KOG1912|consen 162 RVDPFDSRHFCVLGSKGFVL 181 (1062)
T ss_pred eeCCCCcceEEEEccCceEE
Confidence 8877 666665555555543
No 278
>KOG1645|consensus
Probab=97.20 E-value=0.0022 Score=40.67 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=56.0
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
...+..+.++|..+.. +..++-+..+++.|+++..++..+..+. .+++.+|.-+... +..|..+|-|.+||
T Consensus 193 g~~IrdlafSp~~~GL--l~~asl~nkiki~dlet~~~vssy~a~~-----~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGL--LGLASLGNKIKIMDLETSCVVSSYIAYN-----QIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred chhhhhhccCccccce--eeeeccCceEEEEecccceeeeheeccC-----CceeeeeccCCcceeEEeccCceEEEEE
Confidence 3446668888887743 5778889999999999998888888774 8899999876554 66677888898886
No 279
>KOG1354|consensus
Probab=97.17 E-value=0.0036 Score=39.16 Aligned_cols=100 Identities=12% Similarity=0.233 Sum_probs=62.3
Q ss_pred cCCCceEEEEeCccCceee----ecccCC----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccch
Q psy17135 3 KVPSSVIYIWTLLELQTYA----RNDCPE----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCV 67 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~ 67 (106)
++..|+|++-|++...+-. .+..+. --+.+..+.|++.+.+ +++-.. -+|++||+.. .+++
T Consensus 232 SSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGry---ilsRDy-ltvk~wD~nme~~pv 307 (433)
T KOG1354|consen 232 SSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRY---ILSRDY-LTVKLWDLNMEAKPV 307 (433)
T ss_pred ecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcE---EEEecc-ceeEEEeccccCCcc
Confidence 5678999999998422200 111111 0112344667777766 777765 5799999954 5667
Q ss_pred heecccccc-------C-CCC---eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 68 QEITAHRKK-------F-DES---ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 68 ~~~~~~~~~-------~-~~~---v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++.|.-. . .+. -+.+.|+-++.++++|+.....++++
T Consensus 308 ~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~ 357 (433)
T KOG1354|consen 308 ETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN 357 (433)
T ss_pred eEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence 666655410 0 022 23467888888999999998888874
No 280
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.16 E-value=0.003 Score=41.59 Aligned_cols=54 Identities=9% Similarity=0.006 Sum_probs=41.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK 64 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~ 64 (106)
-.||.|.+||..++.. .... ..-.+..++|+|.+.. +++|+..|.+.+||+.-.
T Consensus 278 C~DgSiiLyD~~~~~t--~~~k--a~~~P~~iaWHp~gai---~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 278 CEDGSIILYDTTRGVT--LLAK--AEFIPTLIAWHPDGAI---FVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCeEEEEEcCCCee--eeee--ecccceEEEEcCCCcE---EEEEcCCceEEEEEeecC
Confidence 3699999999987765 2222 1234566999999988 899999999999997644
No 281
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.15 E-value=0.012 Score=38.14 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=48.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCcc--chheeccccccCCCCeE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKT--CVQEITAHRKKFDESIL 82 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~v~ 82 (106)
..|.+.++.+++....... ........|+|++....+... +..+..+..|++..+. ....+..... ....
T Consensus 211 ~~I~~~~l~~g~~~~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~---~~~~ 284 (428)
T PRK01029 211 PKIFLGSLENPAGKKILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAF---GTQG 284 (428)
T ss_pred ceEEEEECCCCCceEeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCC---CCcC
Confidence 4567777776664222222 122334689999988533111 2223344557766531 2223332210 2345
Q ss_pred EEEEcCCCCEEEEe-cCCCeEEEc
Q psy17135 83 DVAFHPSKPFIASA-GADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~~~~~~s~-~~d~~i~iw 105 (106)
...|+||++.|+.. ..++...+|
T Consensus 285 ~p~wSPDG~~Laf~s~~~g~~~ly 308 (428)
T PRK01029 285 NPSFSPDGTRLVFVSNKDGRPRIY 308 (428)
T ss_pred CeEECCCCCEEEEEECCCCCceEE
Confidence 67899999976544 455654444
No 282
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.15 E-value=0.0018 Score=28.69 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=24.9
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..|..++|+|....+|.+..+|.|.++
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~ 38 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVY 38 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEE
Confidence 578999999999999999999999876
No 283
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.08 E-value=0.0011 Score=26.46 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=22.9
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEee
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWN 60 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd 60 (106)
...+..+.|.+.... +++++.|+.+++|+
T Consensus 12 ~~~i~~~~~~~~~~~---~~~~~~d~~~~~~~ 40 (40)
T smart00320 12 TGPVTSVAFSPDGKY---LASASDDGTIKLWD 40 (40)
T ss_pred CCceeEEEECCCCCE---EEEecCCCeEEEcC
Confidence 345667888887755 79999999999996
No 284
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.02 E-value=0.021 Score=37.23 Aligned_cols=87 Identities=10% Similarity=-0.008 Sum_probs=48.7
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--CcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--CSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.|.++|...... ..+.. .........|+|++....+ +...+ ..+.++|+.+++.. .+.... .......
T Consensus 199 ~l~i~d~dG~~~-~~l~~--~~~~~~~p~wSPDG~~La~--~s~~~g~~~L~~~dl~tg~~~-~lt~~~----g~~~~~~ 268 (448)
T PRK04792 199 QLMIADYDGYNE-QMLLR--SPEPLMSPAWSPDGRKLAY--VSFENRKAEIFVQDIYTQVRE-KVTSFP----GINGAPR 268 (448)
T ss_pred EEEEEeCCCCCc-eEeec--CCCcccCceECCCCCEEEE--EEecCCCcEEEEEECCCCCeE-EecCCC----CCcCCee
Confidence 566777655433 12211 1223456789999887422 22222 35788898877532 222222 2334678
Q ss_pred EcCCCCEEE-EecCCCeEEE
Q psy17135 86 FHPSKPFIA-SAGADGLAKV 104 (106)
Q Consensus 86 ~~~~~~~~~-s~~~d~~i~i 104 (106)
|+|+++.++ +.+.++...+
T Consensus 269 wSPDG~~La~~~~~~g~~~I 288 (448)
T PRK04792 269 FSPDGKKLALVLSKDGQPEI 288 (448)
T ss_pred ECCCCCEEEEEEeCCCCeEE
Confidence 999999765 4556665333
No 285
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.01 E-value=0.021 Score=39.67 Aligned_cols=87 Identities=7% Similarity=0.092 Sum_probs=51.5
Q ss_pred CCCceEEEEeCccCc-eeeecccCC--CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 4 VPSSVIYIWTLLELQ-TYARNDCPE--LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.+++.+.-||.+-.. .+....... ......++ ....... +|.|+.+|.||+||-...+....+++-. ..
T Consensus 549 ls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~-aTt~~G~---iavgs~~G~IRLyd~~g~~AKT~lp~lG----~p 620 (794)
T PF08553_consen 549 LSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCF-ATTEDGY---IAVGSNKGDIRLYDRLGKRAKTALPGLG----DP 620 (794)
T ss_pred ECCCceEEeccCCCCCceeeccccccccCCCceEE-EecCCce---EEEEeCCCcEEeecccchhhhhcCCCCC----CC
Confidence 466778888887432 111111100 11122222 2333334 6999999999999953323333344444 89
Q ss_pred eEEEEEcCCCCEEEEecC
Q psy17135 81 ILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~ 98 (106)
|..+..+.||+++++.+.
T Consensus 621 I~~iDvt~DGkwilaTc~ 638 (794)
T PF08553_consen 621 IIGIDVTADGKWILATCK 638 (794)
T ss_pred eeEEEecCCCcEEEEeec
Confidence 999999999999766553
No 286
>KOG4714|consensus
Probab=97.00 E-value=0.007 Score=36.56 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=43.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN 63 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~ 63 (106)
..||.+-+||.+....... ....|......+.|+|..+.. |+++++||.+-.||..+
T Consensus 199 t~dg~~~l~d~rn~~~p~S-~l~ahk~~i~eV~FHpk~p~~--Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 199 TDDGIVGLWDARNVAMPVS-LLKAHKAEIWEVHFHPKNPEH--LFTCSEDGSLWHWDAST 255 (319)
T ss_pred cCCCeEEEEEcccccchHH-HHHHhhhhhhheeccCCCchh--eeEecCCCcEEEEcCCC
Confidence 4689999999998754222 223355667779999998877 78999999999999864
No 287
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.96 E-value=0.037 Score=35.05 Aligned_cols=66 Identities=6% Similarity=0.013 Sum_probs=46.2
Q ss_pred eEeeeCCCCceEEEeeC--------CCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEE
Q psy17135 35 CQTIPSSNISLFDSRPG--------HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKV 104 (106)
Q Consensus 35 ~~~~~~~~~~~~~~s~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~i 104 (106)
+.+++.+....+ +.-. ....|-++|..+++.+..+..- ..+..++++||++ .+.+.. .++.|.+
T Consensus 253 ia~~~dg~~lyV-~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-----~~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 253 VAYHRARDRIYL-LADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-----HEIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred EEEcCCCCEEEE-EecCCccccccCCCCEEEEEECCCCeEEEEEeCC-----CceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 667777776422 1211 1247899999999988888643 4789999999999 766555 5677777
Q ss_pred cC
Q psy17135 105 FV 106 (106)
Q Consensus 105 wd 106 (106)
.|
T Consensus 327 iD 328 (352)
T TIGR02658 327 FD 328 (352)
T ss_pred EE
Confidence 65
No 288
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.93 E-value=0.0054 Score=35.97 Aligned_cols=64 Identities=6% Similarity=-0.032 Sum_probs=42.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
.+|+|..+|.++|+.+.......... ...+...+.+.. +++++.++.+..||..+|+.+.....
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~---v~~~~~~~~l~~~d~~tG~~~W~~~~ 64 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIG-GPVATAVPDGGR---VYVASGDGNLYALDAKTGKVLWRFDL 64 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCS-SEEETEEEETTE---EEEEETTSEEEEEETTTSEEEEEEEC
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCC-CccceEEEeCCE---EEEEcCCCEEEEEECCCCCEEEEeec
Confidence 37899999999999977776532111 111123334555 56667889999999999987655543
No 289
>KOG2041|consensus
Probab=96.90 E-value=0.0048 Score=42.20 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=55.9
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---------------hheeccccccCCCCeEEEEEcCCCCEEE
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---------------VQEITAHRKKFDESILDVAFHPSKPFIA 94 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 94 (106)
....++.|+..+.+ +++|+.||.+++..+.+... -+++.+|. ..|..+.|+...+.+.
T Consensus 15 vkL~c~~WNke~gy---IAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~----~sV~vvTWNe~~QKLT 87 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGY---IACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHN----ASVMVVTWNENNQKLT 87 (1189)
T ss_pred ceEEEEEEcccCCe---EEeccccceeEEEEccccCCcccccccccccccchhhhhccCc----ceEEEEEecccccccc
Confidence 34567889998888 89999999999987764321 12355666 8999999999888999
Q ss_pred EecCCCeEEEc
Q psy17135 95 SAGADGLAKVF 105 (106)
Q Consensus 95 s~~~d~~i~iw 105 (106)
++..+|.|.+|
T Consensus 88 tSDt~GlIiVW 98 (1189)
T KOG2041|consen 88 TSDTSGLIIVW 98 (1189)
T ss_pred ccCCCceEEEE
Confidence 99999999998
No 290
>KOG2444|consensus
Probab=96.81 E-value=0.0085 Score=35.41 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=55.0
Q ss_pred CCCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..+|.|.+|+..-. ....++... .-....-.|......+..++..++.++.|+...++.+.....|.. ..+.
T Consensus 77 ~~dg~v~~~n~n~~g~~~d~~~s~----~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~---~~~e 149 (238)
T KOG2444|consen 77 TSDGAVYVFNWNLEGAHSDRVCSG----EESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF---ESGE 149 (238)
T ss_pred cccceEEEecCCccchHHHhhhcc----cccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC---CCcc
Confidence 46788888887632 221122211 111222345555544478999999999999988776655554541 2333
Q ss_pred EEEEcCCCCEEEEe--cCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASA--GADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~--~~d~~i~iwd 106 (106)
....+..+..++.+ |.|..++.|+
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ 175 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWN 175 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcc
Confidence 33334445555555 6666666664
No 291
>KOG1008|consensus
Probab=96.75 E-value=0.001 Score=44.46 Aligned_cols=93 Identities=13% Similarity=0.185 Sum_probs=56.5
Q ss_pred CCCceEEEEeCccC--ceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCC
Q psy17135 4 VPSSVIYIWTLLEL--QTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~ 79 (106)
.+|..+.|||+.++ .+........ .-.+...+.|...... +.+|...+.+.++|++.... ...+. . .
T Consensus 126 rnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~kl---vlaGm~sr~~~ifdlRqs~~~~~svn--T----k 196 (783)
T KOG1008|consen 126 RNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKL---VLAGMTSRSVHIFDLRQSLDSVSSVN--T----K 196 (783)
T ss_pred cccCCccceecccccCCCccccccccccccCccccccccCcch---hhcccccchhhhhhhhhhhhhhhhhh--h----h
Confidence 46788999999876 3322222221 1223456777755555 78888888999999984322 11221 1 2
Q ss_pred CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.+..+...| .+.++++-. |+.|.+||
T Consensus 197 ~vqG~tVdp~~~nY~cs~~-dg~iAiwD 223 (783)
T KOG1008|consen 197 YVQGITVDPFSPNYFCSNS-DGDIAIWD 223 (783)
T ss_pred hcccceecCCCCCceeccc-cCceeecc
Confidence 334444555 555676665 99999997
No 292
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.75 E-value=0.027 Score=36.49 Aligned_cols=68 Identities=15% Similarity=0.031 Sum_probs=39.2
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEee--CCC-ccchheeccccccCCCCeEEEEEcCCCCEEEEecCC---CeEEEcC
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWN--LDN-KTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD---GLAKVFV 106 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd--~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~i~iwd 106 (106)
....|+|++... +.+...++..++|. +.. +.....+.... ..+....|+|+++.++..+.+ ..+.+||
T Consensus 284 ~~p~wSPDG~~L--af~s~~~g~~~ly~~~~~~~g~~~~~lt~~~----~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~d 357 (428)
T PRK01029 284 GNPSFSPDGTRL--VFVSNKDGRPRIYIMQIDPEGQSPRLLTKKY----RNSSCPAWSPDGKKIAFCSVIKGVRQICVYD 357 (428)
T ss_pred CCeEECCCCCEE--EEEECCCCCceEEEEECcccccceEEeccCC----CCccceeECCCCCEEEEEEcCCCCcEEEEEE
Confidence 456899998874 23344456555554 432 22233344333 456678899999987655432 2455553
No 293
>KOG2314|consensus
Probab=96.75 E-value=0.0098 Score=39.46 Aligned_cols=90 Identities=6% Similarity=0.064 Sum_probs=56.4
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~ 84 (106)
..++++|-..+...-..+.........+.+.|.|.+...++.+-+|..|.+..+|.....+..+- ..| ...+.+
T Consensus 469 k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-----~~at~v 543 (698)
T KOG2314|consen 469 KNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-----FAATEV 543 (698)
T ss_pred ccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-----cccccc
Confidence 34667777663111011111111234677899999998655455678889999998753332222 223 467888
Q ss_pred EEcCCCCEEEEecCCC
Q psy17135 85 AFHPSKPFIASAGADG 100 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~ 100 (106)
.|.|.|+++++++.-.
T Consensus 544 eWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 544 EWDPTGRYVVTSSSSW 559 (698)
T ss_pred eECCCCCEEEEeeehh
Confidence 9999999999988544
No 294
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.72 E-value=0.066 Score=37.41 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=58.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC------CCceEEEeeCCCCcEEEeeCCCcc-chheecccccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS------NISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKK 76 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~ 76 (106)
.....|+-.|+.+|+.+....... ......+.|.. ... -..|-.+..+..||.+-.. .+..-..+.=.
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~---~~~v~~~~p~~K~aqlt~e~--tflGls~n~lfriDpR~~~~k~v~~~~k~Y~ 575 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHD---DIPVVDIAPDSKFAQLTNEQ--TFLGLSDNSLFRIDPRLSGNKLVDSQSKQYS 575 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCC---CcceeEecccccccccCCCc--eEEEECCCceEEeccCCCCCceeeccccccc
Confidence 456778899999999877776632 12233444432 122 2456566778889998632 11111111100
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
......|++-+.+| ++|.|+.+|.||+||
T Consensus 576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYD 604 (794)
T ss_pred cCCCceEEEecCCc-eEEEEeCCCcEEeec
Confidence 11566777766655 689999999999996
No 295
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.67 E-value=0.066 Score=38.70 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=59.1
Q ss_pred CCceEEEEeCccCceeeecccC-------------CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--
Q psy17135 5 PSSVIYIWTLLELQTYARNDCP-------------ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-- 69 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-- 69 (106)
.++.|++||..++... .+... ........+.+.|.+... +++-..++.|++||+.++.....
T Consensus 703 ~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~L--YVADs~n~~Irv~D~~tg~~~~~~g 779 (1057)
T PLN02919 703 GQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKEL--YIADSESSSIRALDLKTGGSRLLAG 779 (1057)
T ss_pred CCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEE--EEEECCCCeEEEEECCCCcEEEEEe
Confidence 4567888888765431 11110 001123446777776642 56777789999999987542100
Q ss_pred -----------eccccc----cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 70 -----------ITAHRK----KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 70 -----------~~~~~~----~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..... ..-.....+++++++..+++-..+++|++||
T Consensus 780 g~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD 831 (1057)
T PLN02919 780 GDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLD 831 (1057)
T ss_pred cccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEE
Confidence 000000 0001335788999999999999999999886
No 296
>KOG0309|consensus
Probab=96.62 E-value=0.0035 Score=42.90 Aligned_cols=94 Identities=11% Similarity=0.093 Sum_probs=60.4
Q ss_pred ceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~ 84 (106)
..-.+|++.... ....+..+.|...+..+.|.|..... +++++.|..+..||++.. .++.....-. .....+
T Consensus 91 qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdV--latcsvdt~vh~wd~rSp~~p~ys~~~w~----s~asqV 164 (1081)
T KOG0309|consen 91 QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDV--LATCSVDTYVHAWDMRSPHRPFYSTSSWR----SAASQV 164 (1081)
T ss_pred chhhhhhhhcCCccceEEEEecCccceeccccCCCCCcc--eeeccccccceeeeccCCCcceeeeeccc----ccCcee
Confidence 344577775321 11234444455556668888877775 899999999999999874 3444443333 466778
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|+.-...+.+.+-.+.|++||
T Consensus 165 kwnyk~p~vlasshg~~i~vwd 186 (1081)
T KOG0309|consen 165 KWNYKDPNVLASSHGNDIFVWD 186 (1081)
T ss_pred eecccCcchhhhccCCceEEEe
Confidence 8886444444555567788886
No 297
>KOG4640|consensus
Probab=96.51 E-value=0.019 Score=38.52 Aligned_cols=74 Identities=14% Similarity=0.085 Sum_probs=49.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCC-eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPP-ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.+|.|.+.-+. -+.+..++.+ +..+. +.+|.|++.. ++.|-.||+|++.|+.++..+....... ...|.+
T Consensus 40 ~~gelli~R~n-~qRlwtip~p--~~~v~~sL~W~~DGkl---laVg~kdG~I~L~Dve~~~~l~~~~~s~---e~~is~ 110 (665)
T KOG4640|consen 40 EKGELLIHRLN-WQRLWTIPIP--GENVTASLCWRPDGKL---LAVGFKDGTIRLHDVEKGGRLVSFLFSV---ETDISK 110 (665)
T ss_pred cCCcEEEEEec-cceeEeccCC--CCccceeeeecCCCCE---EEEEecCCeEEEEEccCCCceecccccc---ccchhe
Confidence 46667777776 4444444433 33334 7899999777 8999999999999999987666532222 145555
Q ss_pred EEEc
Q psy17135 84 VAFH 87 (106)
Q Consensus 84 ~~~~ 87 (106)
+-|.
T Consensus 111 ~~w~ 114 (665)
T KOG4640|consen 111 GIWD 114 (665)
T ss_pred eecc
Confidence 5554
No 298
>KOG2041|consensus
Probab=96.51 E-value=0.039 Score=38.13 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=65.3
Q ss_pred CCCceEEEEeCccCceeeec-------------ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 4 VPSSVIYIWTLLELQTYARN-------------DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
..||.+++..+.+...-... ....|+..+..+.|+...+. +.|...+|.|-+|=+-+|.-....
T Consensus 33 G~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QK---LTtSDt~GlIiVWmlykgsW~EEM 109 (1189)
T KOG2041|consen 33 GADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQK---LTTSDTSGLIIVWMLYKGSWCEEM 109 (1189)
T ss_pred cccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccc---ccccCCCceEEEEeeecccHHHHH
Confidence 46788888777553321111 12225555556778887777 788999999999999888765554
Q ss_pred ccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 71 TAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 71 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
...+. .+-|.+++|+.+|..++-...||.|.
T Consensus 110 iNnRn--KSvV~SmsWn~dG~kIcIvYeDGavI 140 (1189)
T KOG2041|consen 110 INNRN--KSVVVSMSWNLDGTKICIVYEDGAVI 140 (1189)
T ss_pred hhCcC--ccEEEEEEEcCCCcEEEEEEccCCEE
Confidence 43332 26788999999999888888887663
No 299
>KOG1275|consensus
Probab=96.50 E-value=0.025 Score=39.75 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=41.1
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
+.+|...|+|.+-|.++-+.++++.+|. +.+.++.. .|+.|++||...
T Consensus 190 lf~G~t~G~V~LrD~~s~~~iht~~aHs----~siSDfDv--~GNlLitCG~S~ 237 (1118)
T KOG1275|consen 190 LFCGDTRGTVFLRDPNSFETIHTFDAHS----GSISDFDV--QGNLLITCGYSM 237 (1118)
T ss_pred EEeecccceEEeecCCcCceeeeeeccc----cceeeeec--cCCeEEEeeccc
Confidence 7899999999999999999999999998 77776544 688999998554
No 300
>KOG2314|consensus
Probab=96.47 E-value=0.018 Score=38.34 Aligned_cols=81 Identities=12% Similarity=0.109 Sum_probs=50.3
Q ss_pred ceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
..++|||+.+|.....+...... ..-....|+.++.+ ++.-.. ..+.|++...-.++..-.-.- .+|....
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy---~Arm~~-~sisIyEtpsf~lld~Kslki----~gIr~Fs 353 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKY---FARMTG-NSISIYETPSFMLLDKKSLKI----SGIRDFS 353 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCce---eEEecc-ceEEEEecCceeeecccccCC----ccccCcc
Confidence 57999999999997777764222 12334677777776 555544 468888876532221111122 5677778
Q ss_pred EcCCCCEEEE
Q psy17135 86 FHPSKPFIAS 95 (106)
Q Consensus 86 ~~~~~~~~~s 95 (106)
|+|.+..||-
T Consensus 354 wsP~~~llAY 363 (698)
T KOG2314|consen 354 WSPTSNLLAY 363 (698)
T ss_pred cCCCcceEEE
Confidence 8887776654
No 301
>KOG0882|consensus
Probab=96.43 E-value=0.028 Score=36.53 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=66.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC------ccchheecccc----
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN------KTCVQEITAHR---- 74 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~------~~~~~~~~~~~---- 74 (106)
.++.|.++|-....+........|.+.+....+++.+.. +++....|.|.-|.... ......+....
T Consensus 120 ~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds---~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~ 196 (558)
T KOG0882|consen 120 KSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDS---AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYG 196 (558)
T ss_pred cCCCcEEECCcCCcCccceecccccCceEEEEeeccccc---eeeccccceeEeecCCCcccCccccccccccccchhhc
Confidence 467788888765554333333345666777888888887 78888889999998763 11100111000
Q ss_pred -ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 -KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 -~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+......++.|+|++..+.+-+.|..|++++
T Consensus 197 f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~ 229 (558)
T KOG0882|consen 197 FPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFV 229 (558)
T ss_pred ccccccCccceEEccccCcccccCcccEEEEEE
Confidence 01125677899999999999999999998863
No 302
>KOG1354|consensus
Probab=96.41 E-value=0.0067 Score=38.01 Aligned_cols=99 Identities=20% Similarity=0.186 Sum_probs=57.8
Q ss_pred CCceEEEEeCcc-CceeeecccC-----CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc----hheecccc
Q psy17135 5 PSSVIYIWTLLE-LQTYARNDCP-----ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC----VQEITAHR 74 (106)
Q Consensus 5 ~d~~i~iwd~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~----~~~~~~~~ 74 (106)
.|=.|.+|++.- .+........ .-...+.+..|+|..-.. ++-.+..|+|++.|++.... .+.+..+.
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~--f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe 260 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNV--FVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE 260 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccE--EEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence 455678888753 2222211111 111235567788865443 56677889999999985432 11111111
Q ss_pred c---c-----CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 K---K-----FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~---~-----~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. + .-..|..+.|+++|+++++-. --++++||
T Consensus 261 dp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD 299 (433)
T KOG1354|consen 261 DPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWD 299 (433)
T ss_pred CCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEe
Confidence 0 0 014677899999999988753 36788887
No 303
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.40 E-value=0.053 Score=31.78 Aligned_cols=93 Identities=9% Similarity=-0.047 Sum_probs=51.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~ 83 (106)
.++.|..||..+|+.+.+...... ..... ...+.. ++.+..++.+..+|..+|+.+... ....... .....
T Consensus 44 ~~~~l~~~d~~tG~~~W~~~~~~~---~~~~~-~~~~~~---v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~-~~~~~ 115 (238)
T PF13360_consen 44 GDGNLYALDAKTGKVLWRFDLPGP---ISGAP-VVDGGR---VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA-GVRSS 115 (238)
T ss_dssp TTSEEEEEETTTSEEEEEEECSSC---GGSGE-EEETTE---EEEEETTSEEEEEETTTSCEEEEEEE-SSCTC-STB--
T ss_pred CCCEEEEEECCCCCEEEEeecccc---cccee-eecccc---cccccceeeeEecccCCcceeeeecccccccc-ccccc
Confidence 678999999999998777766321 11111 222333 345556779999999999887763 3221000 11111
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
......+..++.+..++.+..+
T Consensus 116 ~~~~~~~~~~~~~~~~g~l~~~ 137 (238)
T PF13360_consen 116 SSPAVDGDRLYVGTSSGKLVAL 137 (238)
T ss_dssp SEEEEETTEEEEEETCSEEEEE
T ss_pred cCceEecCEEEEEeccCcEEEE
Confidence 1222225555565556665544
No 304
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.22 E-value=0.071 Score=33.11 Aligned_cols=86 Identities=12% Similarity=0.054 Sum_probs=57.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee-----CCCCcEEEeeCC-CccchheeccccccC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP-----GHDCSIRLWNLD-NKTCVQEITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----~~d~~v~iwd~~-~~~~~~~~~~~~~~~ 77 (106)
.+-....++|..+++....+..+...--..-..|++++.. |.+. ...|.|-+||.. +-+.+.++..+.
T Consensus 25 RPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~---LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~G--- 98 (305)
T PF07433_consen 25 RPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRL---LYTTENDYETGRGVIGVYDAARGYRRIGEFPSHG--- 98 (305)
T ss_pred CCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCE---EEEeccccCCCcEEEEEEECcCCcEEEeEecCCC---
Confidence 3455678999999988665544321111122568888887 5554 345789999998 345677777666
Q ss_pred CCCeEEEEEcCCCCEEEEe
Q psy17135 78 DESILDVAFHPSKPFIASA 96 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~ 96 (106)
-.-..+.+.|++..|+.+
T Consensus 99 -IGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 99 -IGPHELLLMPDGETLVVA 116 (305)
T ss_pred -cChhhEEEcCCCCEEEEE
Confidence 566778889999776655
No 305
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.18 E-value=0.053 Score=35.25 Aligned_cols=89 Identities=17% Similarity=0.141 Sum_probs=54.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEE--EeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIR--LWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~--iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+.++|+.+++........ .....-.|+|++... +++...|+... +.|+.++. +..+.... ..-..-
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~---g~~~~P~fspDG~~l--~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~----gi~~~P 287 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFN---GNNGAPAFSPDGSKL--AFSSSRDGSPDIYLMDLDGKN-LPRLTNGF----GINTSP 287 (425)
T ss_pred ceEEEEeccCCccceeeccC---CccCCccCCCCCCEE--EEEECCCCCccEEEEcCCCCc-ceecccCC----ccccCc
Confidence 46888999988874444432 223445688998776 45666666655 44666655 33344333 222355
Q ss_pred EEcCCCCEE-EEecCCCeEEEc
Q psy17135 85 AFHPSKPFI-ASAGADGLAKVF 105 (106)
Q Consensus 85 ~~~~~~~~~-~s~~~d~~i~iw 105 (106)
.|+|+|+.+ +++++.|.-.+|
T Consensus 288 s~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 288 SWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred cCCCCCCEEEEEeCCCCCcceE
Confidence 789999985 555566654443
No 306
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.18 E-value=0.14 Score=32.28 Aligned_cols=96 Identities=19% Similarity=0.244 Sum_probs=54.4
Q ss_pred CCCceEEEEeCc--cCce--eeeccc-CC-C--CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC--ccc--hheec
Q psy17135 4 VPSSVIYIWTLL--ELQT--YARNDC-PE-L--NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN--KTC--VQEIT 71 (106)
Q Consensus 4 ~~d~~i~iwd~~--~~~~--~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~--~~~--~~~~~ 71 (106)
.-+++|.++++. ++.. +..... +. . ......+..+|++... +++...+..|.+|+++. ++. +..+.
T Consensus 211 e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~l--yvsnr~~~sI~vf~~d~~~g~l~~~~~~~ 288 (345)
T PF10282_consen 211 ELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFL--YVSNRGSNSISVFDLDPATGTLTLVQTVP 288 (345)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEE--EEEECTTTEEEEEEECTTTTTEEEEEEEE
T ss_pred CCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEE--EEEeccCCEEEEEEEecCCCceEEEEEEe
Confidence 346778888887 3322 111111 10 1 1123346777777663 45566677899999843 332 22333
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAG-ADGLAKVF 105 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw 105 (106)
... .....+.++|++++++.+. .++.|.+|
T Consensus 289 ~~G----~~Pr~~~~s~~g~~l~Va~~~s~~v~vf 319 (345)
T PF10282_consen 289 TGG----KFPRHFAFSPDGRYLYVANQDSNTVSVF 319 (345)
T ss_dssp ESS----SSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred CCC----CCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence 222 4578899999999977665 55677766
No 307
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.17 E-value=0.14 Score=32.38 Aligned_cols=60 Identities=7% Similarity=-0.084 Sum_probs=38.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.++.|..+|..+|+.+-.......... .. ...+.. ++.++.++.+..+|..+|+.+....
T Consensus 73 ~~g~v~a~d~~tG~~~W~~~~~~~~~~--~p--~v~~~~---v~v~~~~g~l~ald~~tG~~~W~~~ 132 (377)
T TIGR03300 73 ADGTVVALDAETGKRLWRVDLDERLSG--GV--GADGGL---VFVGTEKGEVIALDAEDGKELWRAK 132 (377)
T ss_pred CCCeEEEEEccCCcEeeeecCCCCccc--ce--EEcCCE---EEEEcCCCEEEEEECCCCcEeeeec
Confidence 467899999999988665554321111 11 112333 5677888999999999988765443
No 308
>KOG2066|consensus
Probab=96.16 E-value=0.022 Score=39.23 Aligned_cols=55 Identities=16% Similarity=0.235 Sum_probs=42.9
Q ss_pred ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCC-----CCEEEEecCCCeEEE
Q psy17135 44 SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPS-----KPFIASAGADGLAKV 104 (106)
Q Consensus 44 ~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~s~~~d~~i~i 104 (106)
+.+++||+.||+|.|-.+.+.+...++.-+ ..+.+++++|+ .+.+++|+..| +.+
T Consensus 83 Gey~asCS~DGkv~I~sl~~~~~~~~~df~-----rpiksial~Pd~~~~~sk~fv~GG~ag-lvL 142 (846)
T KOG2066|consen 83 GEYVASCSDDGKVVIGSLFTDDEITQYDFK-----RPIKSIALHPDFSRQQSKQFVSGGMAG-LVL 142 (846)
T ss_pred CceEEEecCCCcEEEeeccCCccceeEecC-----CcceeEEeccchhhhhhhheeecCcce-EEE
Confidence 334899999999999999888877666655 47888999987 45688888777 544
No 309
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.13 E-value=0.077 Score=28.00 Aligned_cols=52 Identities=25% Similarity=0.213 Sum_probs=37.9
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|+.|+.|..|++|+-. ..+..+... ..+..+.-... ..++.+..+|+|-+|+
T Consensus 18 LlvGs~D~~IRvf~~~--e~~~Ei~e~-----~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 18 LLVGSDDFEIRVFKGD--EIVAEITET-----DKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred EEEecCCcEEEEEeCC--cEEEEEecc-----cceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 7899999999998653 455556544 46777766554 5688888899887664
No 310
>KOG1832|consensus
Probab=96.05 E-value=0.012 Score=41.37 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=52.2
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
++....++.|+..... ++.|+..|.|+++++.+|........|. ..++.+.-+.+|..+.+.+
T Consensus 1100 ~~~~fTc~afs~~~~h---L~vG~~~Geik~~nv~sG~~e~s~ncH~----SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNH---LAVGSHAGEIKIFNVSSGSMEESVNCHQ----SAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred cccceeeEEeecCCce---EEeeeccceEEEEEccCccccccccccc----cccccccccCCcceeeeec
Confidence 4556677888887777 8999999999999999999888888888 8899888888888755544
No 311
>KOG1912|consensus
Probab=95.90 E-value=0.04 Score=38.26 Aligned_cols=98 Identities=10% Similarity=0.051 Sum_probs=66.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEE------EeeCCCCcEEEeeCCCcc--chheeccccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFD------SRPGHDCSIRLWNLDNKT--CVQEITAHRK 75 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~s~~~d~~v~iwd~~~~~--~~~~~~~~~~ 75 (106)
.++|+|.++|+.++.....+. .|.+.+..+.|........+- ++++.-..+.+=|+++|. ..+.++...
T Consensus 444 T~sGTV~vvdvst~~v~~~fs--vht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~d- 520 (1062)
T KOG1912|consen 444 TNSGTVDVVDVSTNAVAASFS--VHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPD- 520 (1062)
T ss_pred cCCceEEEEEecchhhhhhhc--ccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCC-
Confidence 468999999999988733343 356667777776655542110 122222345677888874 344444444
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..|..+..|..+++++....+.-+-+||
T Consensus 521 --espI~~irvS~~~~yLai~Fr~~plEiwd 549 (1062)
T KOG1912|consen 521 --ESPIRAIRVSSSGRYLAILFRREPLEIWD 549 (1062)
T ss_pred --cCcceeeeecccCceEEEEecccchHHHh
Confidence 27899999999999999999988888886
No 312
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=95.87 E-value=0.016 Score=36.08 Aligned_cols=72 Identities=18% Similarity=0.145 Sum_probs=44.9
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------hheecccc------ccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------VQEITAHR------KKFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------~~~~~~~~------~~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
+.+..|+|..-.. +.-.+..|.|++.|++.... +....... ......|..+.|+++|+++++-. -
T Consensus 224 ItSaeFhp~~cn~--fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-y 300 (460)
T COG5170 224 ITSAEFHPEMCNV--FMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-Y 300 (460)
T ss_pred HhhcccCHhHcce--EEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-c
Confidence 4556777765442 45567789999999985421 11111000 00115678899999999988764 3
Q ss_pred CeEEEcC
Q psy17135 100 GLAKVFV 106 (106)
Q Consensus 100 ~~i~iwd 106 (106)
-++++||
T Consensus 301 ltvkiwD 307 (460)
T COG5170 301 LTVKIWD 307 (460)
T ss_pred ceEEEEe
Confidence 5788886
No 313
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.85 E-value=0.19 Score=32.20 Aligned_cols=89 Identities=8% Similarity=-0.055 Sum_probs=49.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE-
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD- 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~- 83 (106)
.++.+...|..+++.+-........ ...... -.+.. ++.++.+|.+.+.|..+|+.+....... ..+..
T Consensus 302 ~~g~l~ald~~tG~~~W~~~~~~~~-~~~sp~--v~~g~---l~v~~~~G~l~~ld~~tG~~~~~~~~~~----~~~~s~ 371 (394)
T PRK11138 302 QNDRVYALDTRGGVELWSQSDLLHR-LLTAPV--LYNGY---LVVGDSEGYLHWINREDGRFVAQQKVDS----SGFLSE 371 (394)
T ss_pred CCCeEEEEECCCCcEEEcccccCCC-cccCCE--EECCE---EEEEeCCCEEEEEECCCCCEEEEEEcCC----CcceeC
Confidence 4566777777777653322211000 000000 01233 5678889999999999998776654433 22322
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..+ .+..++.++.||.+..+
T Consensus 372 P~~--~~~~l~v~t~~G~l~~~ 391 (394)
T PRK11138 372 PVV--ADDKLLIQARDGTVYAI 391 (394)
T ss_pred CEE--ECCEEEEEeCCceEEEE
Confidence 112 24467777889988765
No 314
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.73 E-value=0.26 Score=33.68 Aligned_cols=48 Identities=6% Similarity=0.063 Sum_probs=31.4
Q ss_pred CcEEEeeCCC-----ccchheeccccccCCCCeEEEEEcCCCCEEEE-ecCCCeEEEcC
Q psy17135 54 CSIRLWNLDN-----KTCVQEITAHRKKFDESILDVAFHPSKPFIAS-AGADGLAKVFV 106 (106)
Q Consensus 54 ~~v~iwd~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s-~~~d~~i~iwd 106 (106)
+.|.+.|..+ .+.+..+... .....+.++||+++++. +..+.++.+.|
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVG-----KsPHGV~vSPDGkylyVanklS~tVSVID 349 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVP-----KNPHGVNTSPDGKYFIANGKLSPTVTVID 349 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECC-----CCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence 4577777776 2344444433 46688999999998654 44577777654
No 315
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.66 E-value=0.33 Score=33.25 Aligned_cols=92 Identities=11% Similarity=-0.025 Sum_probs=63.5
Q ss_pred CCceEEEEeCcc-----CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------h
Q psy17135 5 PSSVIYIWTLLE-----LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------V 67 (106)
Q Consensus 5 ~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~ 67 (106)
+++.|.+.|..+ .+.+..... ......+..+|++.+. ++++..+.+|.+.|+.+.+. .
T Consensus 294 ~gn~V~VID~~t~~~~~~~v~~yIPV---GKsPHGV~vSPDGkyl--yVanklS~tVSVIDv~k~k~~~~~~~~~~~~vv 368 (635)
T PRK02888 294 GGSKVPVVDGRKAANAGSALTRYVPV---PKNPHGVNTSPDGKYF--IANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVV 368 (635)
T ss_pred CCCEEEEEECCccccCCcceEEEEEC---CCCccceEECCCCCEE--EEeCCCCCcEEEEEChhhhhhhhccCCccceEE
Confidence 457799999887 333333333 2346668889999885 67788899999999987543 1
Q ss_pred heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 68 QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 68 ~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+... ...-...+|.++|..+.|..-|..|.-|+
T Consensus 369 aevev-----GlGPLHTaFDg~G~aytslf~dsqv~kwn 402 (635)
T PRK02888 369 AEPEL-----GLGPLHTAFDGRGNAYTTLFLDSQIVKWN 402 (635)
T ss_pred Eeecc-----CCCcceEEECCCCCEEEeEeecceeEEEe
Confidence 11111 13445668888888888888898888885
No 316
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.52 E-value=0.039 Score=24.44 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=26.4
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
.+..+.|+|.... ++.+..+|.|.++.+ +++.
T Consensus 13 ~v~~~~w~P~mdL---iA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 13 RVSCMSWCPTMDL---IALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred cEEEEEECCCCCE---EEEEECCCeEEEEEC-CCcC
Confidence 4667899998887 899999999999988 5543
No 317
>PRK04043 tolB translocation protein TolB; Provisional
Probab=95.50 E-value=0.39 Score=31.30 Aligned_cols=82 Identities=11% Similarity=0.088 Sum_probs=46.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
++..|.++|+.+++. .++... ........|+|++....| +....+ .|.+.|+.+++..+... .. ..
T Consensus 255 g~~~Iy~~dl~~g~~-~~LT~~--~~~d~~p~~SPDG~~I~F--~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g----~~-- 322 (419)
T PRK04043 255 GQPDIYLYDTNTKTL-TQITNY--PGIDVNGNFVEDDKRIVF--VSDRLGYPNIFMKKLNSGSVEQVVF-HG----KN-- 322 (419)
T ss_pred CCcEEEEEECCCCcE-EEcccC--CCccCccEECCCCCEEEE--EECCCCCceEEEEECCCCCeEeCcc-CC----Cc--
Confidence 456788889887764 233221 112334579999887544 332233 56777887765422222 12 11
Q ss_pred EEEEcCCCCEEEEecC
Q psy17135 83 DVAFHPSKPFIASAGA 98 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~ 98 (106)
...|+|+++.++-.+.
T Consensus 323 ~~~~SPDG~~Ia~~~~ 338 (419)
T PRK04043 323 NSSVSTYKNYIVYSSR 338 (419)
T ss_pred CceECCCCCEEEEEEc
Confidence 2489999998765553
No 318
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=95.39 E-value=0.37 Score=30.45 Aligned_cols=94 Identities=15% Similarity=0.206 Sum_probs=56.5
Q ss_pred CCceEEEEeCcc-CceeeecccCCCCC----------CCCeeEeeeCCCCceEEEee--CCCCcEEEeeCCCccchhee-
Q psy17135 5 PSSVIYIWTLLE-LQTYARNDCPELNS----------EPPACQTIPSSNISLFDSRP--GHDCSIRLWNLDNKTCVQEI- 70 (106)
Q Consensus 5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~s~--~~d~~v~iwd~~~~~~~~~~- 70 (106)
..|.|.++-++. |..........|.. ......+.|.+.. ++++ +.| .|.+|++..|+....-
T Consensus 109 ~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~---l~v~DLG~D-ri~~y~~~dg~L~~~~~ 184 (346)
T COG2706 109 HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRY---LVVPDLGTD-RIFLYDLDDGKLTPADP 184 (346)
T ss_pred cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCE---EEEeecCCc-eEEEEEcccCccccccc
Confidence 457788888865 33322211111111 2556677777776 4444 555 4889999977643222
Q ss_pred -ccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEc
Q psy17135 71 -TAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVF 105 (106)
Q Consensus 71 -~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iw 105 (106)
...+ ..+-..+.|+|++++. +.+=-+++|-+|
T Consensus 185 ~~v~~---G~GPRHi~FHpn~k~aY~v~EL~stV~v~ 218 (346)
T COG2706 185 AEVKP---GAGPRHIVFHPNGKYAYLVNELNSTVDVL 218 (346)
T ss_pred cccCC---CCCcceEEEcCCCcEEEEEeccCCEEEEE
Confidence 2222 2678899999999984 445567777766
No 319
>KOG1920|consensus
Probab=95.34 E-value=0.25 Score=36.03 Aligned_cols=93 Identities=10% Similarity=0.110 Sum_probs=56.8
Q ss_pred CCC-ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee---CCCCcEEEeeCCCccchhe--eccccccC
Q psy17135 4 VPS-SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP---GHDCSIRLWNLDNKTCVQE--ITAHRKKF 77 (106)
Q Consensus 4 ~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~d~~v~iwd~~~~~~~~~--~~~~~~~~ 77 (106)
.++ ..|++||-. |.+...-... ...-.++.|-|.+.. +++. ..|+.|.+|.-+ |-.-.. ++....
T Consensus 218 ~~~~RkirV~drE-g~Lns~se~~--~~l~~~LsWkPsgs~---iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~d-- 288 (1265)
T KOG1920|consen 218 ETGTRKIRVYDRE-GALNSTSEPV--EGLQHSLSWKPSGSL---IAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLD-- 288 (1265)
T ss_pred cCCceeEEEeccc-chhhcccCcc--cccccceeecCCCCe---EeeeeecCCCCcEEEEecC-CccccccccCCccc--
Confidence 344 789999987 5552222221 233466889997777 4443 455678888653 322121 111221
Q ss_pred CCCeEEEEEcCCCCEEEE---ecCCCeEEEc
Q psy17135 78 DESILDVAFHPSKPFIAS---AGADGLAKVF 105 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s---~~~d~~i~iw 105 (106)
...+..++|+.++..|+. +.....|++|
T Consensus 289 e~~ve~L~Wns~sdiLAv~~~~~e~~~v~lw 319 (1265)
T KOG1920|consen 289 EKEVEELAWNSNSDILAVVTSNLENSLVQLW 319 (1265)
T ss_pred ccchheeeecCCCCceeeeecccccceEEEE
Confidence 134889999999998877 5566668888
No 320
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.31 E-value=0.31 Score=28.92 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=43.0
Q ss_pred eeeCCCCceEEEeeCCCCcEEEeeCCCccchhee------cccc----ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 37 TIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI------TAHR----KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 37 ~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~------~~~~----~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
....+.. +++...+|.+++||+.+++++..- -... ......|..+.++.+|..+++-+ +|..+.|+
T Consensus 18 l~~~~~~---Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 18 LECNGSY---LLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS 93 (219)
T ss_pred EEeCCCE---EEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence 3444555 778888999999999988653221 1110 01126788888998888877765 46666664
No 321
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=95.25 E-value=0.42 Score=30.22 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=56.1
Q ss_pred CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEee---CCCCcEEEeeCCC--ccc--hheeccc
Q psy17135 2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRP---GHDCSIRLWNLDN--KTC--VQEITAH 73 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~d~~v~iwd~~~--~~~--~~~~~~~ 73 (106)
|+..+.-|+.|++.+.+- +.....-.......-+.+.|.... |.++ +.++.|-.|.++. |.. +......
T Consensus 11 T~~~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~---LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~ 87 (346)
T COG2706 11 TKRESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRH---LYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLP 87 (346)
T ss_pred cccCCCceEEEEEeCcccccchhhhccccCCCceEEECCCCCE---EEEEEecCCcCcEEEEEEcCCCCeEEEeeccccC
Confidence 345677899999984322 112222222334556888888776 4554 3457777776664 542 2222222
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCC-CeEEE
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGAD-GLAKV 104 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d-~~i~i 104 (106)
. ..-+.+++++++++++++... +.|.+
T Consensus 88 g----~~p~yvsvd~~g~~vf~AnY~~g~v~v 115 (346)
T COG2706 88 G----SPPCYVSVDEDGRFVFVANYHSGSVSV 115 (346)
T ss_pred C----CCCeEEEECCCCCEEEEEEccCceEEE
Confidence 2 344888999999998887744 44444
No 322
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.23 E-value=0.21 Score=35.81 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=46.0
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEe----eCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLW----NLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iw----d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
..+..+.|.+.... ++.+..+|.|-+. +..+.. -.+-+.- ..+|.+.+||||+..++-...++++.+
T Consensus 76 ~~ivs~~yl~d~~~---l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~ 146 (928)
T PF04762_consen 76 DKIVSFQYLADSES---LCIALASGDIILVREDPDPDEDE--IEIVGSV---DSGILAASWSPDEELLALVTGEGNLLL 146 (928)
T ss_pred CcEEEEEeccCCCc---EEEEECCceEEEEEccCCCCCce--eEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEE
Confidence 34666777777777 6777778888887 333322 2222222 179999999999999888887877654
No 323
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.19 E-value=0.054 Score=33.07 Aligned_cols=28 Identities=14% Similarity=0.379 Sum_probs=26.5
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|..+..|||+..|++...+|.+.+|+
T Consensus 230 d~i~kmSlSPdg~~La~ih~sG~lsLW~ 257 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIHFSGSLSLWE 257 (282)
T ss_pred CceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence 6889999999999999999999999995
No 324
>KOG2079|consensus
Probab=95.05 E-value=0.062 Score=38.49 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=42.6
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.|+..|.+...|+...-.-..-..+. ..+|.+++|+.+|..++.|-.+|-|.+||
T Consensus 102 ivi~Ts~ghvl~~d~~~nL~~~~~ne~v---~~~Vtsvafn~dg~~l~~G~~~G~V~v~D 158 (1206)
T KOG2079|consen 102 IVIGTSHGHVLLSDMTGNLGPLHQNERV---QGPVTSVAFNQDGSLLLAGLGDGHVTVWD 158 (1206)
T ss_pred EEEEcCchhhhhhhhhcccchhhcCCcc---CCcceeeEecCCCceeccccCCCcEEEEE
Confidence 5777888888888876431111112222 27899999999999999999999999997
No 325
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.03 E-value=0.41 Score=30.21 Aligned_cols=92 Identities=15% Similarity=0.201 Sum_probs=53.4
Q ss_pred CceEEEEeC--ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----CCCcEEEeeCCCc--c--chheeccccc
Q psy17135 6 SSVIYIWTL--LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----HDCSIRLWNLDNK--T--CVQEITAHRK 75 (106)
Q Consensus 6 d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~d~~v~iwd~~~~--~--~~~~~~~~~~ 75 (106)
.+.|..|++ .+++........ .......+.++|.+.. |.+.. .++.|..|.+... + .+.......
T Consensus 12 ~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~---LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g- 86 (345)
T PF10282_consen 12 GGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRR---LYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGG- 86 (345)
T ss_dssp STEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSE---EEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESS-
T ss_pred CCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCE---EEEEEccccCCCCEEEEEECCCcceeEEeeeeccCC-
Confidence 477888888 444442222111 1223444666776655 44443 4678988887753 3 223332222
Q ss_pred cCCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135 76 KFDESILDVAFHPSKPFIASAG-ADGLAKVF 105 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw 105 (106)
.....++++|++++++++. .++.+.++
T Consensus 87 ---~~p~~i~~~~~g~~l~vany~~g~v~v~ 114 (345)
T PF10282_consen 87 ---SSPCHIAVDPDGRFLYVANYGGGSVSVF 114 (345)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ---CCcEEEEEecCCCEEEEEEccCCeEEEE
Confidence 5667899999999877766 46777654
No 326
>KOG2395|consensus
Probab=94.99 E-value=0.46 Score=31.95 Aligned_cols=98 Identities=8% Similarity=0.026 Sum_probs=52.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceE----EEeeCCCCcEEEeeCCC-cc-chheeccccccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLF----DSRPGHDCSIRLWNLDN-KT-CVQEITAHRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~s~~~d~~v~iwd~~~-~~-~~~~~~~~~~~~~ 78 (106)
+-..++-.|+.+|+.+...... ..+..+.+.|.....++ -+.|-.+..|+-||++- ++ .+...+.|.=...
T Consensus 354 ~~~~l~klDIE~GKIVeEWk~~---~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k 430 (644)
T KOG2395|consen 354 EQDKLYKLDIERGKIVEEWKFE---DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTK 430 (644)
T ss_pred CcCcceeeecccceeeeEeecc---CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccc
Confidence 3345666777777776555552 22334444443322111 12355567788899883 22 2222222210001
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
....|.+-..+| +++.||.+|.|++||
T Consensus 431 ~nFsc~aTT~sG-~IvvgS~~GdIRLYd 457 (644)
T KOG2395|consen 431 NNFSCFATTESG-YIVVGSLKGDIRLYD 457 (644)
T ss_pred cccceeeecCCc-eEEEeecCCcEEeeh
Confidence 345555555444 789999999999986
No 327
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=94.97 E-value=0.082 Score=33.07 Aligned_cols=97 Identities=10% Similarity=0.154 Sum_probs=55.9
Q ss_pred CCcCCCceEEEEeCccCce-ee---ecccCC----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-c
Q psy17135 1 MQKVPSSVIYIWTLLELQT-YA---RNDCPE----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-T 65 (106)
Q Consensus 1 ~~~~~d~~i~iwd~~~~~~-~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~ 65 (106)
|-+...|.|++-|++.... .. .+.... ..+.+....|++.+.+ +++-.. -+|++||.+.. .
T Consensus 238 mYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngry---IlsRdy-ltvkiwDvnm~k~ 313 (460)
T COG5170 238 MYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRY---ILSRDY-LTVKIWDVNMAKN 313 (460)
T ss_pred EEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcE---EEEecc-ceEEEEecccccC
Confidence 4467789999999973211 00 111100 1122344677777766 677665 47999999875 4
Q ss_pred chheecccccc-------C-CCCe---EEEEEcCCCCEEEEecCCCe
Q psy17135 66 CVQEITAHRKK-------F-DESI---LDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 66 ~~~~~~~~~~~-------~-~~~v---~~~~~~~~~~~~~s~~~d~~ 101 (106)
++++++-|... . .+.| +.+.||.+...+.+|+....
T Consensus 314 pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NN 360 (460)
T COG5170 314 PIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNN 360 (460)
T ss_pred CceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccc
Confidence 67776544310 0 0233 34677777777777775543
No 328
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.93 E-value=0.2 Score=32.75 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=47.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEee--eCCCCceEEEeeCCCCcEEEeeC-CCcc----chheecc------
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTI--PSSNISLFDSRPGHDCSIRLWNL-DNKT----CVQEITA------ 72 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~d~~v~iwd~-~~~~----~~~~~~~------ 72 (106)
-.++.+||+.+.+.+..+...........+.|. |....+ ++.+.-..+|..|-- +.+. .+-++..
T Consensus 221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g--Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~ 298 (461)
T PF05694_consen 221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG--FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW 298 (461)
T ss_dssp --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE--EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS
T ss_pred cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce--EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcc
Confidence 357999999999998887775322223335553 444444 455544555555533 2231 1111211
Q ss_pred -----------ccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 73 -----------HRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 73 -----------~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
-+ .-++.+.+|.|.++| +++--+|.++.||
T Consensus 299 ~lp~ml~~~~~~P----~LitDI~iSlDDrfLYvs~W~~GdvrqYD 340 (461)
T PF05694_consen 299 ILPEMLKPFGAVP----PLITDILISLDDRFLYVSNWLHGDVRQYD 340 (461)
T ss_dssp ---GGGGGG-EE----------EEE-TTS-EEEEEETTTTEEEEEE
T ss_pred cccccccccccCC----CceEeEEEccCCCEEEEEcccCCcEEEEe
Confidence 12 467889999988875 7777889999886
No 329
>KOG2066|consensus
Probab=94.90 E-value=0.26 Score=34.40 Aligned_cols=94 Identities=16% Similarity=0.096 Sum_probs=56.8
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCC-c-cchheeccccccC
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDN-K-TCVQEITAHRKKF 77 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~-~-~~~~~~~~~~~~~ 77 (106)
+|+.||+|.|--+-+.+....+.. ......+..+|. .+...-+++|+..| +-++.-+- + +....+....
T Consensus 88 sCS~DGkv~I~sl~~~~~~~~~df---~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e--- 160 (846)
T KOG2066|consen 88 SCSDDGKVVIGSLFTDDEITQYDF---KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE--- 160 (846)
T ss_pred EecCCCcEEEeeccCCccceeEec---CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc---
Confidence 578899999999888776555554 234566777777 11112268999988 66554221 1 1111233334
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|.++.|. |.++|=++.+| |+++|
T Consensus 161 -G~I~~i~W~--g~lIAWand~G-v~vyd 185 (846)
T KOG2066|consen 161 -GPIHSIKWR--GNLIAWANDDG-VKVYD 185 (846)
T ss_pred -cceEEEEec--CcEEEEecCCC-cEEEe
Confidence 789999996 55665555444 45543
No 330
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=94.77 E-value=0.76 Score=30.66 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=40.8
Q ss_pred EEeeCCCC-cEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 47 DSRPGHDC-SIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 47 ~~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
++-|..|| .+-++|.+++.. +.+...- +.|.+++.+++|..++.+.....+.+
T Consensus 374 ~vigt~dgD~l~iyd~~~~e~-kr~e~~l----g~I~av~vs~dGK~~vvaNdr~el~v 427 (668)
T COG4946 374 DVIGTNDGDKLGIYDKDGGEV-KRIEKDL----GNIEAVKVSPDGKKVVVANDRFELWV 427 (668)
T ss_pred eEEeccCCceEEEEecCCceE-EEeeCCc----cceEEEEEcCCCcEEEEEcCceEEEE
Confidence 67888888 788999988763 3444455 79999999999998888876655544
No 331
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=94.75 E-value=0.12 Score=32.56 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=42.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
-+...|=++|+++++.+.+....+ .+.++......... +++....++.+.+||..+|+.++.+..
T Consensus 266 dpgteVWv~D~~t~krv~Ri~l~~---~~~Si~Vsqd~~P~-L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 266 DPGTEVWVYDLKTHKRVARIPLEH---PIDSIAVSQDDKPL-LYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp S-EEEEEEEETTTTEEEEEEEEEE---EESEEEEESSSS-E-EEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CCceEEEEEECCCCeEEEEEeCCC---ccceEEEccCCCcE-EEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 345678889999999988888742 23455555544433 224445678999999999998877764
No 332
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=94.68 E-value=0.65 Score=33.47 Aligned_cols=91 Identities=14% Similarity=0.179 Sum_probs=54.9
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..+++|+=. |+...... ....-...++|.|.++. +++.-. ...|-+|.- +|-.-..+.-........|..
T Consensus 237 R~iRVy~Re-G~L~stSE--~v~gLe~~l~WrPsG~l---IA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~ 309 (928)
T PF04762_consen 237 RVIRVYSRE-GELQSTSE--PVDGLEGALSWRPSGNL---IASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIE 309 (928)
T ss_pred eEEEEECCC-ceEEeccc--cCCCccCCccCCCCCCE---EEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeE
Confidence 567888865 55522222 22333456889999987 666533 244555543 454333333221111268899
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.|++++..|+....|. |.+|
T Consensus 310 l~Wn~ds~iLAv~~~~~-vqLW 330 (928)
T PF04762_consen 310 LAWNSDSEILAVWLEDR-VQLW 330 (928)
T ss_pred EEECCCCCEEEEEecCC-ceEE
Confidence 99999999998877655 8887
No 333
>KOG2079|consensus
Probab=94.66 E-value=0.22 Score=35.94 Aligned_cols=69 Identities=10% Similarity=0.161 Sum_probs=47.4
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
...+.+++++..+.. ++.|-.+|.|.+||...++.++.+..+..++ ..+..+.+..++..+.++...|.
T Consensus 130 ~~~Vtsvafn~dg~~---l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~-t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSL---LLAGLGDGHVTVWDMHRAKILKVITEHGAPV-TGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred CCcceeeEecCCCce---eccccCCCcEEEEEccCCcceeeeeecCCcc-ceEEEEEEeCCCcEEEEccCCCc
Confidence 344556777777777 8899999999999999999888876654222 34444455444556666666664
No 334
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=94.53 E-value=0.53 Score=28.98 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=37.2
Q ss_pred EeeCCCCcEEEeeCCCc--cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 48 SRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.-.|..|-+-..+.. .++...+.+... ...=..++||||+..+|.+...|+|++||
T Consensus 12 lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~-~PQWRkl~WSpD~tlLa~a~S~G~i~vfd 71 (282)
T PF15492_consen 12 LAILQDQCIEIRSAKDDFSSIIGKCQVPKDP-NPQWRKLAWSPDCTLLAYAESTGTIRVFD 71 (282)
T ss_pred EEEEeccEEEEEeccCCchheeEEEecCCCC-CchheEEEECCCCcEEEEEcCCCeEEEEe
Confidence 44555666666655543 222222222210 14567899999999999999999999986
No 335
>KOG1645|consensus
Probab=94.42 E-value=0.33 Score=31.42 Aligned_cols=55 Identities=7% Similarity=-0.078 Sum_probs=42.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK 64 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~ 64 (106)
-+.+|.|.|+.+...+..+.. + ..+-+|.|..+.... +..|-..|.|.+||++..
T Consensus 214 l~nkiki~dlet~~~vssy~a--~-~~~wSC~wDlde~h~--IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 214 LGNKIKIMDLETSCVVSSYIA--Y-NQIWSCCWDLDERHV--IYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred cCceEEEEecccceeeeheec--c-CCceeeeeccCCcce--eEEeccCceEEEEEccCC
Confidence 467899999998887555554 2 346778898877554 679999999999999864
No 336
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.30 E-value=0.94 Score=31.26 Aligned_cols=52 Identities=13% Similarity=0.294 Sum_probs=36.9
Q ss_pred eCCCCcEEEeeCCCccchheec-cccccCCCCeEEEEEc--CCCCEEEEecCCCeEEEc
Q psy17135 50 PGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILDVAFH--PSKPFIASAGADGLAKVF 105 (106)
Q Consensus 50 ~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~i~iw 105 (106)
-+....+.|||.+.+.....-. ... +.|.++.|. |++..+.+.|..+.|.++
T Consensus 47 ~~~~~~LtIWD~~~~~lE~~~~f~~~----~~I~dLDWtst~d~qsiLaVGf~~~v~l~ 101 (631)
T PF12234_consen 47 DSSRSELTIWDTRSGVLEYEESFSED----DPIRDLDWTSTPDGQSILAVGFPHHVLLY 101 (631)
T ss_pred ECCCCEEEEEEcCCcEEEEeeeecCC----CceeeceeeecCCCCEEEEEEcCcEEEEE
Confidence 3444568899999877433222 223 689999884 688888888888888775
No 337
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.25 E-value=0.85 Score=30.46 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=52.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
...+.|+++..... +... .-.+.+....|.|.+....+ ++|-+...+.++|++.. ....++ + ..-..+.
T Consensus 254 esnLyl~~~~e~~i--~V~~-~~~~pVhdf~W~p~S~~F~v-i~g~~pa~~s~~~lr~N-l~~~~P--e----~~rNT~~ 322 (561)
T COG5354 254 ESNLYLLRITERSI--PVEK-DLKDPVHDFTWEPLSSRFAV-ISGYMPASVSVFDLRGN-LRFYFP--E----QKRNTIF 322 (561)
T ss_pred cceEEEEeeccccc--ceec-cccccceeeeecccCCceeE-Eecccccceeecccccc-eEEecC--C----ccccccc
Confidence 35567777763332 2221 12345677889998887433 56678888999999755 222222 2 2224456
Q ss_pred EcCCCCEEEEecCCC---eEEEcC
Q psy17135 86 FHPSKPFIASAGADG---LAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~---~i~iwd 106 (106)
|+|.+++++.++.|. .+-+||
T Consensus 323 fsp~~r~il~agF~nl~gni~i~~ 346 (561)
T COG5354 323 FSPHERYILFAGFDNLQGNIEIFD 346 (561)
T ss_pred ccCcccEEEEecCCccccceEEec
Confidence 788888877766553 344443
No 338
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.14 E-value=0.27 Score=32.66 Aligned_cols=60 Identities=10% Similarity=0.206 Sum_probs=42.8
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
+....|+|.+.+ |++.... .|.+|.-.....+..+. | ..|..+.|+|.+.+|.+-++...
T Consensus 35 ~~~~~~SP~G~~---l~~~~~~-~V~~~~g~~~~~l~~~~-~-----~~V~~~~fSP~~kYL~tw~~~pi 94 (561)
T COG5354 35 VAYVSESPLGTY---LFSEHAA-GVECWGGPSKAKLVRFR-H-----PDVKYLDFSPNEKYLVTWSREPI 94 (561)
T ss_pred hhheeecCcchh---eehhhcc-ceEEccccchhheeeee-c-----CCceecccCcccceeeeeccCCc
Confidence 455778888877 6666554 58899776655343333 3 58899999999999999876554
No 339
>KOG3630|consensus
Probab=93.86 E-value=0.16 Score=36.88 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=59.8
Q ss_pred CCceEEEEeCccCceee-----ecc---cCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheecccc
Q psy17135 5 PSSVIYIWTLLELQTYA-----RND---CPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHR 74 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~-----~~~---~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~ 74 (106)
++..|..||+++..... .+. ... ...-...+.|+|.-... .+....|+.+++..+..- +....+. -.
T Consensus 122 ng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n--~av~l~dlsl~V~~~~~~~~~v~s~p-~t 198 (1405)
T KOG3630|consen 122 NGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLN--SAVDLSDLSLRVKSTKQLAQNVTSFP-VT 198 (1405)
T ss_pred CCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccch--hhhhccccchhhhhhhhhhhhhcccC-cc
Confidence 36678889997644311 010 000 11123457788877665 567788888888765432 2222222 12
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..++++.|+|.|..++.|-..|++..|
T Consensus 199 ----~~~Tav~WSprGKQl~iG~nnGt~vQy 225 (1405)
T KOG3630|consen 199 ----NSQTAVLWSPRGKQLFIGRNNGTEVQY 225 (1405)
T ss_pred ----cceeeEEeccccceeeEecCCCeEEEe
Confidence 578999999999999999999988654
No 340
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.84 E-value=1.1 Score=30.26 Aligned_cols=63 Identities=2% Similarity=-0.087 Sum_probs=41.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
+-|.|.-+|+.+++..-+....... ..... .-.+.. ++.+..+|.++.+|.++|+.+..++..
T Consensus 439 ~~g~l~AiD~~tGk~~W~~~~~~p~--~~~~l-~t~g~l---vf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 439 HMGSLIAWDPITGKIVWEHKEDFPL--WGGVL-ATAGDL---VFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CceeEEEEeCCCCceeeEecCCCCC--CCcce-EECCcE---EEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 4578999999999985555443211 11111 112222 466888999999999999988776543
No 341
>KOG2395|consensus
Probab=93.75 E-value=1.4 Score=29.83 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=35.5
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
++.|+.+|.||+||--......-+++-. ..|..+..+.+|.+++.-+
T Consensus 444 IvvgS~~GdIRLYdri~~~AKTAlPgLG----~~I~hVdvtadGKwil~Tc 490 (644)
T KOG2395|consen 444 IVVGSLKGDIRLYDRIGRRAKTALPGLG----DAIKHVDVTADGKWILATC 490 (644)
T ss_pred EEEeecCCcEEeehhhhhhhhhcccccC----CceeeEEeeccCcEEEEec
Confidence 6899999999999983333333455554 7899999999999876655
No 342
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=93.41 E-value=0.33 Score=30.68 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=49.0
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc----------
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---------- 75 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---------- 75 (106)
.+.+.+||+.+++....... ........|+|.+... +-. .++.+.+++..++...+.-..-..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~---~~v-~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwv 94 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYI---AFV-RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWV 94 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEE---EEE-ETTEEEEESSTTSEEEESES--TTTEEESB--HH
T ss_pred ceeEEEEecCCCceEECcCC---ccccccceeecCCCee---EEE-ecCceEEEECCCCCeEEeccccceeEEcCcccee
Confidence 46788999999876332222 3346678899998773 333 356788888876643221110000
Q ss_pred ---cCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 76 ---KFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 76 ---~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
.--+.-..+-||||++.|+....|
T Consensus 95 yeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 95 YEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp HHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred ccccccccccceEECCCCCEEEEEEEC
Confidence 000223567899999998765533
No 343
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=93.19 E-value=0.34 Score=21.03 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=23.5
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK 64 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~ 64 (106)
+.++.|+|......+|+-.-..+.|.++|++++
T Consensus 3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred eEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 467889976662233666666788999999864
No 344
>KOG1916|consensus
Probab=92.11 E-value=0.2 Score=35.69 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=42.9
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc------CCCCeEEE-EEcCCCCEEEEecCCCeEEEc
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK------FDESILDV-AFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~~-~~~~~~~~~~s~~~d~~i~iw 105 (106)
-.+.|.|.-.....+..+-.++.+++..+..... ..+..|..+ ...++..+ ..||||..++.++.||.++.|
T Consensus 184 ~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~ 262 (1283)
T KOG1916|consen 184 QLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY 262 (1283)
T ss_pred ceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence 3355555433333356677778888877654322 334445411 00122222 379999999999999998877
No 345
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=91.99 E-value=1.1 Score=23.80 Aligned_cols=85 Identities=9% Similarity=0.033 Sum_probs=47.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|..|++|+=.. .+....- ...+..+..... .. ++-+-.+|+|-+|+-.. +.+....+ ..+.+
T Consensus 22 s~D~~IRvf~~~e--~~~Ei~e---~~~v~~L~~~~~-~~---F~Y~l~NGTVGvY~~~~----RlWRiKSK---~~~~~ 85 (111)
T PF14783_consen 22 SDDFEIRVFKGDE--IVAEITE---TDKVTSLCSLGG-GR---FAYALANGTVGVYDRSQ----RLWRIKSK---NQVTS 85 (111)
T ss_pred cCCcEEEEEeCCc--EEEEEec---ccceEEEEEcCC-CE---EEEEecCCEEEEEeCcc----eeeeeccC---CCeEE
Confidence 5677888887653 2223332 223344433333 33 68899999999996632 22222221 35666
Q ss_pred EEEcC---CCC-EEEEecCCCeEEE
Q psy17135 84 VAFHP---SKP-FIASAGADGLAKV 104 (106)
Q Consensus 84 ~~~~~---~~~-~~~s~~~d~~i~i 104 (106)
+.+.. +|. -|++|-.+|.+-+
T Consensus 86 ~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 86 MAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred EEEEcCCCCCceEEEEEecCCeEEe
Confidence 65443 333 4888888888743
No 346
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.70 E-value=2.9 Score=29.71 Aligned_cols=85 Identities=8% Similarity=0.004 Sum_probs=48.5
Q ss_pred CCceEEEEeCccCceeeecccCCCCCC-CCee---------Eee----eCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSE-PPAC---------QTI----PSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~---------~~~----~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
+=|.|.-+|+++++.+-+......... ...+ ... .....+.+++.+..|+.++.+|.++|+.+-+.
T Consensus 639 p~G~l~AiDl~tGk~~W~~~~g~~~~~~p~~~~~~~~~~~g~p~~gG~l~TagglvF~~gt~d~~l~A~D~~tGk~lW~~ 718 (764)
T TIGR03074 639 PWGYMAAIDLKTGKVVWQHPNGTVRDTGPMGIRMPLPIPIGVPTLGGPLATAGGLVFIGATQDNYLRAYDLSTGKELWKA 718 (764)
T ss_pred CcEEEEEEECCCCcEeeeeECCccccccccccccccccccCCcccCCcEEEcCCEEEEEeCCCCEEEEEECCCCceeeEe
Confidence 458899999999998665554211110 0000 000 00111223345789999999999999988776
Q ss_pred ccccccCCCCeEEEEEc-CCCCE
Q psy17135 71 TAHRKKFDESILDVAFH-PSKPF 92 (106)
Q Consensus 71 ~~~~~~~~~~v~~~~~~-~~~~~ 92 (106)
.-... ..-.-+.|. .+|+.
T Consensus 719 ~l~~~---~~a~P~tY~~~~GkQ 738 (764)
T TIGR03074 719 RLPAG---GQATPMTYMGKDGKQ 738 (764)
T ss_pred eCCCC---cccCCEEEEecCCEE
Confidence 65442 223334555 46654
No 347
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=91.63 E-value=0.52 Score=19.45 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=17.4
Q ss_pred CCeEEEEEcCCCCEE-EEecCC--CeEEEc
Q psy17135 79 ESILDVAFHPSKPFI-ASAGAD--GLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~-~s~~~d--~~i~iw 105 (106)
..-....|+|||+.| .++..+ |...||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 456778899999875 455555 655555
No 348
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=91.59 E-value=3.3 Score=28.58 Aligned_cols=92 Identities=14% Similarity=0.213 Sum_probs=47.8
Q ss_pred ceEEEEeCc-----cCceeeecccCCCC---CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cccchheecccccc
Q psy17135 7 SVIYIWTLL-----ELQTYARNDCPELN---SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHRKK 76 (106)
Q Consensus 7 ~~i~iwd~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~ 76 (106)
..|.+|-+. +.+.+..-.++... .-.-.|.|+|......+ +| ..|-.| +.++. +......+. ..
T Consensus 82 khVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~V-LT-~~dvSV-~~sV~~d~srVkaDi~-~~-- 155 (671)
T PF15390_consen 82 KHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTV-LT-ARDVSV-LPSVHCDSSRVKADIK-TS-- 155 (671)
T ss_pred ceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEE-Ee-cCceeE-eeeeeeCCceEEEecc-CC--
Confidence 568889875 23332222222211 12334889998876322 22 223222 23333 223333343 23
Q ss_pred CCCCeEEEEEcCCCCEEEE-ecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIAS-AGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s-~~~d~~i~iwd 106 (106)
+.|.|..|.+||..++. .+..=-.++||
T Consensus 156 --G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 156 --GLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred --ceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 68999999999987544 33333456775
No 349
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=91.54 E-value=3.4 Score=28.72 Aligned_cols=88 Identities=14% Similarity=0.136 Sum_probs=53.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC-----CCc----cchhee--ccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL-----DNK----TCVQEI--TAH 73 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~-----~~~----~~~~~~--~~~ 73 (106)
....+.|||.+.+......... ....+..+.|...... ..+++.+..+.|.++.- .+. .+++.+ ..+
T Consensus 49 ~~~~LtIWD~~~~~lE~~~~f~-~~~~I~dLDWtst~d~-qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~ 126 (631)
T PF12234_consen 49 SRSELTIWDTRSGVLEYEESFS-EDDPIRDLDWTSTPDG-QSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSH 126 (631)
T ss_pred CCCEEEEEEcCCcEEEEeeeec-CCCceeeceeeecCCC-CEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecC
Confidence 3567999999988875544442 2344666777654332 22577777788888742 111 123332 222
Q ss_pred cccCCCCeEEEEEcCCCCEEEEec
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
.. ..|.+..|.++|..++.++
T Consensus 127 T~---h~Igds~Wl~~G~LvV~sG 147 (631)
T PF12234_consen 127 TP---HPIGDSIWLKDGTLVVGSG 147 (631)
T ss_pred CC---CCccceeEecCCeEEEEeC
Confidence 21 4677889999988766554
No 350
>KOG2114|consensus
Probab=91.44 E-value=1.9 Score=30.75 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=42.5
Q ss_pred CeeEeeeCCCCceEEEeeCCCC-----cEEEeeCCCc------cch---heeccccccCCCCeEEEEEcCCCCEEEEecC
Q psy17135 33 PACQTIPSSNISLFDSRPGHDC-----SIRLWNLDNK------TCV---QEITAHRKKFDESILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~-----~v~iwd~~~~------~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~ 98 (106)
....|....... |++.++|. .+++|+++.. .++ +.+....+.....+.+++.+.+-..+|.|-.
T Consensus 68 v~~L~~~~~~~~--L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~ 145 (933)
T KOG2114|consen 68 VQFLYILNKQNF--LFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFT 145 (933)
T ss_pred hhHhhcccCceE--EEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEec
Confidence 334444444332 66766554 4899998743 223 1111010011257788899988888999999
Q ss_pred CCeEEEc
Q psy17135 99 DGLAKVF 105 (106)
Q Consensus 99 d~~i~iw 105 (106)
+|.|..+
T Consensus 146 nG~V~~~ 152 (933)
T KOG2114|consen 146 NGLVICY 152 (933)
T ss_pred CcEEEEE
Confidence 9988754
No 351
>KOG1008|consensus
Probab=91.44 E-value=0.19 Score=34.42 Aligned_cols=68 Identities=19% Similarity=0.301 Sum_probs=40.4
Q ss_pred EeeeCCCCceEEEeeCCCCcEEEee-CCC-ccchheeccccccCCCCeEEEEEcCCCC-EEEEecCC-CeEEEcC
Q psy17135 36 QTIPSSNISLFDSRPGHDCSIRLWN-LDN-KTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGAD-GLAKVFV 106 (106)
Q Consensus 36 ~~~~~~~~~~~~~s~~~d~~v~iwd-~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d-~~i~iwd 106 (106)
...|.... .++...|+.+-+|| .++ ..++.++...+..--.++..++|+|... .+++..+| ++|+++|
T Consensus 202 tVdp~~~n---Y~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlyd 273 (783)
T KOG1008|consen 202 TVDPFSPN---YFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYD 273 (783)
T ss_pred eecCCCCC---ceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEec
Confidence 34564444 35556699999999 444 3344444433211014689999999554 36666666 5677654
No 352
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=91.19 E-value=0.24 Score=33.16 Aligned_cols=23 Identities=22% Similarity=0.596 Sum_probs=20.2
Q ss_pred EEeeCCCCcEEEeeCCCccchhe
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQE 69 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~ 69 (106)
+++.+.|+.+|+||+.+++++..
T Consensus 233 l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 233 LFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EEEEETTSEEEEEETTTTCEEEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEE
Confidence 68999999999999999988444
No 353
>KOG1920|consensus
Probab=91.10 E-value=3.9 Score=30.48 Aligned_cols=67 Identities=12% Similarity=0.057 Sum_probs=46.7
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
..+.++.|...... ++.+...|.|.+-|..+.. +.....-. .+|.+.+||||+.+++-....+++.+
T Consensus 69 ~~i~s~~fl~d~~~---i~v~~~~G~iilvd~et~~-~eivg~vd----~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNS---ICVITALGDIILVDPETLE-LEIVGNVD----NGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred cceEEEEEecccce---EEEEecCCcEEEEcccccc-eeeeeecc----CceEEEeecCCCcEEEEEeCCcEEEE
Confidence 34566777777766 5677778888888776543 22222233 78999999999999888777776644
No 354
>KOG0882|consensus
Probab=90.98 E-value=3.3 Score=27.58 Aligned_cols=97 Identities=11% Similarity=0.089 Sum_probs=61.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hhe-eccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQE-ITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~-~~~~~~~~~~~v 81 (106)
.+|..++++|+.+............. +...+...+......+.++...++.+.++|-....+ ... -.-|. .+|
T Consensus 73 d~Dhs~KvfDvEn~DminmiKL~~lP-g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~----sPV 147 (558)
T KOG0882|consen 73 DPDHSVKVFDVENFDMINMIKLVDLP-GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHF----SPV 147 (558)
T ss_pred CcccceeEEEeeccchhhhcccccCC-CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceeccccc----Cce
Confidence 35889999999887765444442211 222333333333332335556778899999775442 222 23355 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..+.+++.+..++|....|-|.-|
T Consensus 148 ~~i~y~qa~Ds~vSiD~~gmVEyW 171 (558)
T KOG0882|consen 148 KKIRYNQAGDSAVSIDISGMVEYW 171 (558)
T ss_pred EEEEeeccccceeeccccceeEee
Confidence 999999988888888877877777
No 355
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=90.42 E-value=1.2 Score=29.40 Aligned_cols=48 Identities=10% Similarity=0.160 Sum_probs=30.6
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
|+..+. +.|.+||+.+++.++.+.. ..|..+.|++++.+++-.+.+..
T Consensus 120 L~~~~~-~~i~~yDw~~~~~i~~i~v------~~vk~V~Ws~~g~~val~t~~~i 167 (443)
T PF04053_consen 120 LGVKSS-DFICFYDWETGKLIRRIDV------SAVKYVIWSDDGELVALVTKDSI 167 (443)
T ss_dssp EEEEET-TEEEEE-TTT--EEEEESS-------E-EEEEE-TTSSEEEEE-S-SE
T ss_pred EEEECC-CCEEEEEhhHcceeeEEec------CCCcEEEEECCCCEEEEEeCCeE
Confidence 444443 3799999999998888862 24789999999999888876643
No 356
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=90.13 E-value=3.6 Score=26.56 Aligned_cols=91 Identities=10% Similarity=0.092 Sum_probs=59.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
+++.|.+.|+.+.......... .....+.+.+.+... .++-. .++++.+.|..+.+.+.....-. .. .
T Consensus 94 ~~~~v~vid~~~~~~~~~~~vG---~~P~~~~~~~~~~~v--YV~n~~~~~~~vsvid~~t~~~~~~~~vG~----~P-~ 163 (381)
T COG3391 94 DSNTVSVIDTATNTVLGSIPVG---LGPVGLAVDPDGKYV--YVANAGNGNNTVSVIDAATNKVTATIPVGN----TP-T 163 (381)
T ss_pred CCCeEEEEcCcccceeeEeeec---cCCceEEECCCCCEE--EEEecccCCceEEEEeCCCCeEEEEEecCC----Cc-c
Confidence 3677888887777665555442 145667778877763 23333 47888899998888777754333 23 8
Q ss_pred EEEEcCCCCEE-EEecCCCeEEEc
Q psy17135 83 DVAFHPSKPFI-ASAGADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~~~~~-~s~~~d~~i~iw 105 (106)
.+++.|++..+ ++-..++.+.+.
T Consensus 164 ~~a~~p~g~~vyv~~~~~~~v~vi 187 (381)
T COG3391 164 GVAVDPDGNKVYVTNSDDNTVSVI 187 (381)
T ss_pred eEEECCCCCeEEEEecCCCeEEEE
Confidence 88999999854 444466666654
No 357
>KOG4649|consensus
Probab=90.11 E-value=3.1 Score=25.84 Aligned_cols=61 Identities=11% Similarity=-0.016 Sum_probs=40.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.|.+++.+.++|.....+... ..........+.+.. +..++.|+.....|.++..++...+
T Consensus 72 ~g~lYfl~~~tGs~~w~f~~~--~~vk~~a~~d~~~gl---Iycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 72 SGGLYFLCVKTGSQIWNFVIL--ETVKVRAQCDFDGGL---IYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred cCcEEEEEecchhheeeeeeh--hhhccceEEcCCCce---EEEecCCCcEEEecccccceEEecc
Confidence 566788888888765555442 111122333445555 7899999999999998877765543
No 358
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=89.73 E-value=3.6 Score=25.94 Aligned_cols=93 Identities=9% Similarity=0.051 Sum_probs=55.0
Q ss_pred CCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEee----------------CCCCcEEEeeCCCccc
Q psy17135 4 VPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP----------------GHDCSIRLWNLDNKTC 66 (106)
Q Consensus 4 ~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----------------~~d~~v~iwd~~~~~~ 66 (106)
...|.|-+||.. +.+.+..+.. +--+...+.+.|++...++ +-| .++..+-..|..+|+.
T Consensus 74 ~g~G~IgVyd~~~~~~ri~E~~s--~GIGPHel~l~pDG~tLvV-ANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l 150 (305)
T PF07433_consen 74 TGRGVIGVYDAARGYRRIGEFPS--HGIGPHELLLMPDGETLVV-ANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL 150 (305)
T ss_pred CCcEEEEEEECcCCcEEEeEecC--CCcChhhEEEcCCCCEEEE-EcCCCccCcccCceecChhhcCCceEEEecCCCce
Confidence 457899999998 5665444444 3334566778887765211 222 2334455556677776
Q ss_pred hheeccccccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 67 VQEITAHRKKFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
+.+..-...-+...+..+++.+++..++..-..
T Consensus 151 l~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~q 183 (305)
T PF07433_consen 151 LEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQ 183 (305)
T ss_pred eeeeecCccccccceeeEEecCCCcEEEEEecC
Confidence 666432111112678888888888776655433
No 359
>KOG4499|consensus
Probab=89.36 E-value=3.5 Score=25.27 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=32.1
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH 87 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 87 (106)
.+++-..++|...|..+|+.+.++.-+. ..+++.+|-
T Consensus 226 ~Va~~ng~~V~~~dp~tGK~L~eiklPt----~qitsccFg 262 (310)
T KOG4499|consen 226 YVATFNGGTVQKVDPTTGKILLEIKLPT----PQITSCCFG 262 (310)
T ss_pred EEEEecCcEEEEECCCCCcEEEEEEcCC----CceEEEEec
Confidence 5777778899999999999999988777 899999985
No 360
>KOG4649|consensus
Probab=89.07 E-value=3.9 Score=25.46 Aligned_cols=54 Identities=6% Similarity=-0.063 Sum_probs=36.7
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE-EEcCCCCEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV-AFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~s~~~d~~i~iw 105 (106)
++-|...+.+.+.+.++|..+..+..-. .|-+- ...+++..+..++.|+..+.-
T Consensus 66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~-----~vk~~a~~d~~~glIycgshd~~~yal 120 (354)
T KOG4649|consen 66 VVLGCYSGGLYFLCVKTGSQIWNFVILE-----TVKVRAQCDFDGGLIYCGSHDGNFYAL 120 (354)
T ss_pred EEEEEccCcEEEEEecchhheeeeeehh-----hhccceEEcCCCceEEEecCCCcEEEe
Confidence 6889999999999999997666655433 22222 234567777777777776543
No 361
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=88.78 E-value=5 Score=26.50 Aligned_cols=69 Identities=14% Similarity=0.039 Sum_probs=42.1
Q ss_pred CCeeEeeeCCCCceEEEeeCCC-CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE-EEEecCCCeEEEc
Q psy17135 32 PPACQTIPSSNISLFDSRPGHD-CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGADGLAKVF 105 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iw 105 (106)
...-.|.|.+....++.--... ..+.++++++++....... . ..-..-+|+||++. +++..+|+...+|
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~-~----g~~~~P~fspDG~~l~f~~~rdg~~~iy 265 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF-N----GNNGAPAFSPDGSKLAFSSSRDGSPDIY 265 (425)
T ss_pred eeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc-C----CccCCccCCCCCCEEEEEECCCCCccEE
Confidence 3445678877775442111222 4588899998875555442 2 33455689999887 4666677765554
No 362
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=88.26 E-value=3.4 Score=27.03 Aligned_cols=48 Identities=10% Similarity=-0.019 Sum_probs=35.3
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD 62 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~ 62 (106)
.|.||+.. |+.+....... ..+..+.|... .. |+....||.++++|+.
T Consensus 62 ~I~iys~s-G~ll~~i~w~~--~~iv~~~wt~~-e~---LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDS--GRIVGMGWTDD-EE---LVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECCC-CCEeEEEEECC--CCEEEEEECCC-Ce---EEEEEcCCEEEEEeCC
Confidence 69999986 55666666643 45777888774 44 5677789999999986
No 363
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=88.14 E-value=3.9 Score=24.35 Aligned_cols=86 Identities=13% Similarity=-0.010 Sum_probs=43.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~ 83 (106)
..+.|.-||..+++... ... .....+.+...... ++.+... .+.++|..+++........... .....+.
T Consensus 20 ~~~~i~~~~~~~~~~~~-~~~----~~~~G~~~~~~~g~---l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND 90 (246)
T PF08450_consen 20 PGGRIYRVDPDTGEVEV-IDL----PGPNGMAFDRPDGR---LYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPND 90 (246)
T ss_dssp TTTEEEEEETTTTEEEE-EES----SSEEEEEEECTTSE---EEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEE
T ss_pred CCCEEEEEECCCCeEEE-Eec----CCCceEEEEccCCE---EEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCce
Confidence 45566666666655421 222 12444555533433 3444444 4555698887543322221000 0157788
Q ss_pred EEEcCCCCEEEEecCC
Q psy17135 84 VAFHPSKPFIASAGAD 99 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d 99 (106)
+++.|+|.+.++....
T Consensus 91 ~~vd~~G~ly~t~~~~ 106 (246)
T PF08450_consen 91 VAVDPDGNLYVTDSGG 106 (246)
T ss_dssp EEE-TTS-EEEEEECC
T ss_pred EEEcCCCCEEEEecCC
Confidence 9999999988776533
No 364
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=87.51 E-value=5.1 Score=25.01 Aligned_cols=92 Identities=13% Similarity=0.041 Sum_probs=52.3
Q ss_pred CceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~ 83 (106)
.+.|.+|++...+ ........ ...........+.. ++.|.....+.++..+. ...+..+..... ...+.+
T Consensus 106 g~~l~v~~l~~~~~l~~~~~~~---~~~~i~sl~~~~~~---I~vgD~~~sv~~~~~~~~~~~l~~va~d~~--~~~v~~ 177 (321)
T PF03178_consen 106 GNKLYVYDLDNSKTLLKKAFYD---SPFYITSLSVFKNY---ILVGDAMKSVSLLRYDEENNKLILVARDYQ--PRWVTA 177 (321)
T ss_dssp TTEEEEEEEETTSSEEEEEEE----BSSSEEEEEEETTE---EEEEESSSSEEEEEEETTTE-EEEEEEESS---BEEEE
T ss_pred cCEEEEEEccCcccchhhheec---ceEEEEEEeccccE---EEEEEcccCEEEEEEEccCCEEEEEEecCC--CccEEE
Confidence 4678999998877 43333332 11233333333444 67777777787775443 222333322110 145778
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.+-+++..++.+..+|.+.++
T Consensus 178 ~~~l~d~~~~i~~D~~gnl~~l 199 (321)
T PF03178_consen 178 AEFLVDEDTIIVGDKDGNLFVL 199 (321)
T ss_dssp EEEE-SSSEEEEEETTSEEEEE
T ss_pred EEEecCCcEEEEEcCCCeEEEE
Confidence 8887666788999999988765
No 365
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.15 E-value=5.6 Score=25.11 Aligned_cols=86 Identities=12% Similarity=0.038 Sum_probs=53.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC-----CCcEEEeeCCCc-cchheeccccccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH-----DCSIRLWNLDNK-TCVQEITAHRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----d~~v~iwd~~~~-~~~~~~~~~~~~~~ 78 (106)
+-....++|....+.......+...--..--.|+|++.. |...-. -|.|-+||.+.+ +.+..+..|.
T Consensus 89 PGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~---LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~G---- 161 (366)
T COG3490 89 PGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRL---LYATENDFDPNRGVIGVYDAREGFQRVGEFSTHG---- 161 (366)
T ss_pred CCceEEEECCCCCcCcEEEecccCceeecccccCCCCcE---EEeecCCCCCCCceEEEEecccccceecccccCC----
Confidence 334566788877665444443321111122447787776 333322 266889999865 4567777777
Q ss_pred CCeEEEEEcCCCCEEEEec
Q psy17135 79 ESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~ 97 (106)
-.-..+.+.+||+.++.+.
T Consensus 162 iGpHev~lm~DGrtlvvan 180 (366)
T COG3490 162 IGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred cCcceeEEecCCcEEEEeC
Confidence 6778889999999887664
No 366
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=87.09 E-value=4.6 Score=24.05 Aligned_cols=93 Identities=12% Similarity=0.001 Sum_probs=52.4
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-h---heeccccccCCCCeE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-V---QEITAHRKKFDESIL 82 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~---~~~~~~~~~~~~~v~ 82 (106)
|.|..++.. ++....... -.....+.|+|.+... +++-+..+.|..+++..... + +.+..... .....-
T Consensus 115 g~v~~~~~~-~~~~~~~~~---~~~pNGi~~s~dg~~l--yv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~g~pD 187 (246)
T PF08450_consen 115 GSVYRIDPD-GKVTVVADG---LGFPNGIAFSPDGKTL--YVADSFNGRIWRFDLDADGGELSNRRVFIDFPG-GPGYPD 187 (246)
T ss_dssp EEEEEEETT-SEEEEEEEE---ESSEEEEEEETTSSEE--EEEETTTTEEEEEEEETTTCCEEEEEEEEE-SS-SSCEEE
T ss_pred cceEEECCC-CeEEEEecC---cccccceEECCcchhe--eecccccceeEEEeccccccceeeeeeEEEcCC-CCcCCC
Confidence 556666666 333111111 2235568899987763 45778888888888863221 1 12211110 002356
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++..++++.++....+.|.+++
T Consensus 188 G~~vD~~G~l~va~~~~~~I~~~~ 211 (246)
T PF08450_consen 188 GLAVDSDGNLWVADWGGGRIVVFD 211 (246)
T ss_dssp EEEEBTTS-EEEEEETTTEEEEEE
T ss_pred cceEcCCCCEEEEEcCCCEEEEEC
Confidence 788888888888777777776653
No 367
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=87.03 E-value=6.2 Score=25.44 Aligned_cols=64 Identities=5% Similarity=-0.144 Sum_probs=37.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCC-----CeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEP-----PACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.++.+.-+|.++|+.+-+.......... ..+.-.| .+.. +..++.++.+..+|.++|+.+....
T Consensus 77 ~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 77 RAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGK---VYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred CCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCE---EEEEcCCCEEEEEECCCCCCccccc
Confidence 4577888999988886665543211000 0000001 1222 4567788999999999998766554
No 368
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=86.24 E-value=6.8 Score=25.16 Aligned_cols=66 Identities=17% Similarity=0.206 Sum_probs=33.6
Q ss_pred CceEEEEeCccCceeeecccCCC-C----CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPEL-N----SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
.-.|.+||.++.........+.. . ........+..+... ++.-.+-...|.+.|+..++.+.++..
T Consensus 66 tDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~-~V~N~TPa~SVtVVDl~~~kvv~ei~~ 136 (342)
T PF06433_consen 66 TDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFL-YVQNFTPATSVTVVDLAAKKVVGEIDT 136 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEE-EEEEESSSEEEEEEETTTTEEEEEEEG
T ss_pred eeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEE-EEEccCCCCeEEEEECCCCceeeeecC
Confidence 34688999999877554444321 1 011122333333332 122334445566777777666665543
No 369
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=85.88 E-value=6 Score=24.16 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=45.9
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.+..+.|.|..... ++.....+.|.-.+. +|+.++.+.-... .....+++..++.++++.-+++.+.++
T Consensus 23 e~SGLTy~pd~~tL--faV~d~~~~i~els~-~G~vlr~i~l~g~---~D~EgI~y~g~~~~vl~~Er~~~L~~~ 91 (248)
T PF06977_consen 23 ELSGLTYNPDTGTL--FAVQDEPGEIYELSL-DGKVLRRIPLDGF---GDYEGITYLGNGRYVLSEERDQRLYIF 91 (248)
T ss_dssp -EEEEEEETTTTEE--EEEETTTTEEEEEET-T--EEEEEE-SS----SSEEEEEE-STTEEEEEETTTTEEEEE
T ss_pred CccccEEcCCCCeE--EEEECCCCEEEEEcC-CCCEEEEEeCCCC---CCceeEEEECCCEEEEEEcCCCcEEEE
Confidence 45668999977763 677788888887786 4777777654431 577888888778777777667776543
No 370
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=85.56 E-value=6.4 Score=24.22 Aligned_cols=55 Identities=11% Similarity=-0.031 Sum_probs=35.7
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE-cCC-C-CEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF-HPS-K-PFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~-~-~~~~s~~~d~~i~iw 105 (106)
++-|.+++.+.+.|...-..+.++.-.. ..+.-... .-+ . ..++.+++||.|++-
T Consensus 198 LViGTE~~~i~iLd~~af~il~~~~lps----vPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 198 LVIGTESGEIYILDPQAFTILKQVQLPS----VPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred EEEEecCCeEEEECchhheeEEEEecCC----CceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 6889999999999998766666655443 23321111 112 2 347888899998763
No 371
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=85.44 E-value=8.8 Score=25.72 Aligned_cols=65 Identities=5% Similarity=-0.114 Sum_probs=41.1
Q ss_pred CCceEEEEeCccCceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
.+|.+.-.|+.+++.+-........ ...........+.. ++.++.|+.+..+|.++|+.+...+.
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~---v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL---VFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCe---EEEECCCCeEEEEECCCCceeeEEEC
Confidence 4688999999999986655442111 00000001112233 57788999999999999998776654
No 372
>KOG3621|consensus
Probab=85.07 E-value=3 Score=29.15 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=39.9
Q ss_pred EEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
++-|+.-|.+.+|+-..++.... ..+.. ..+.....|++..++|.|+..|.|.++
T Consensus 48 l~~GsS~G~lyl~~R~~~~~~~~~~~~~~----~~~~~~~vs~~e~lvAagt~~g~V~v~ 103 (726)
T KOG3621|consen 48 LAMGSSAGSVYLYNRHTGEMRKLKNEGAT----GITCVRSVSSVEYLVAAGTASGRVSVF 103 (726)
T ss_pred EEEecccceEEEEecCchhhhcccccCcc----ceEEEEEecchhHhhhhhcCCceEEee
Confidence 78899999999998776653222 22232 456666789888888999888888765
No 373
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=84.90 E-value=2 Score=17.73 Aligned_cols=25 Identities=4% Similarity=-0.063 Sum_probs=20.2
Q ss_pred EeeCCCCcEEEeeCCCccchheecc
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
..+..++.+...|.++|+.+-.+..
T Consensus 4 ~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 4 YVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEeCCCCEEEEEECCCCCEEEeeeC
Confidence 4558999999999999998766653
No 374
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=84.48 E-value=1.8 Score=16.87 Aligned_cols=22 Identities=5% Similarity=-0.091 Sum_probs=17.0
Q ss_pred EEeeCCCCcEEEeeCCCccchh
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQ 68 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~ 68 (106)
+..++.++.+..+|.++|+.+.
T Consensus 9 v~~~~~~g~l~a~d~~~G~~~W 30 (33)
T smart00564 9 VYVGSTDGTLYALDAKTGEILW 30 (33)
T ss_pred EEEEcCCCEEEEEEcccCcEEE
Confidence 4667788999999998887543
No 375
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=83.52 E-value=4.9 Score=23.95 Aligned_cols=20 Identities=20% Similarity=0.499 Sum_probs=16.0
Q ss_pred CCCceEEEEeCccCceeeec
Q psy17135 4 VPSSVIYIWTLLELQTYARN 23 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~ 23 (106)
..+|.+++||+.+++.+...
T Consensus 29 T~~G~l~vWnl~~~k~~~~~ 48 (219)
T PF07569_consen 29 TSSGLLYVWNLKKGKAVLPP 48 (219)
T ss_pred eCCCeEEEEECCCCeeccCC
Confidence 57899999999998874433
No 376
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=83.51 E-value=2.3 Score=17.49 Aligned_cols=26 Identities=4% Similarity=0.082 Sum_probs=19.1
Q ss_pred EEeeCCCCcEEEeeCCCccchheecc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
+++.-.++.|.++|..+++.+..+..
T Consensus 7 yv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 7 YVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 45666678899999988776666654
No 377
>KOG3617|consensus
Probab=82.92 E-value=5.2 Score=29.15 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=39.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD 62 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~ 62 (106)
.-|.+.+|...+.+. ......|...+..+.|++.+.. ++|+..-|.|.+|.+.
T Consensus 79 e~g~~~v~~~~~~e~--htv~~th~a~i~~l~wS~~G~~---l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 79 EMGVSDVQKTNTTET--HTVVETHPAPIQGLDWSHDGTV---LMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccceeEEEecCCcee--eeeccCCCCCceeEEecCCCCe---EEEcCCCceeEEEEee
Confidence 346778888877665 2222234556777999999988 8999999999999776
No 378
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=81.89 E-value=11 Score=24.33 Aligned_cols=81 Identities=5% Similarity=-0.085 Sum_probs=44.9
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee-CC---------CCcEEEeeCCCccch--heecccc
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP-GH---------DCSIRLWNLDNKTCV--QEITAHR 74 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~---------d~~v~iwd~~~~~~~--~~~~~~~ 74 (106)
.+|++.|+.+++.+..... ......+.|.+.+... +.+. .. ...|..|.+.+...- -.+....
T Consensus 150 ~~l~v~Dl~tg~~l~d~i~---~~~~~~~~W~~d~~~~--~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~ 224 (414)
T PF02897_consen 150 YTLRVFDLETGKFLPDGIE---NPKFSSVSWSDDGKGF--FYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD 224 (414)
T ss_dssp EEEEEEETTTTEEEEEEEE---EEESEEEEECTTSSEE--EEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT
T ss_pred EEEEEEECCCCcCcCCccc---ccccceEEEeCCCCEE--EEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC
Confidence 5689999999977543211 1222238888877764 2332 22 334677777665432 2233322
Q ss_pred ccCCCC-eEEEEEcCCCCEEEE
Q psy17135 75 KKFDES-ILDVAFHPSKPFIAS 95 (106)
Q Consensus 75 ~~~~~~-v~~~~~~~~~~~~~s 95 (106)
. .. ...+..++++++++.
T Consensus 225 ~---~~~~~~~~~s~d~~~l~i 243 (414)
T PF02897_consen 225 E---PFWFVSVSRSKDGRYLFI 243 (414)
T ss_dssp C---TTSEEEEEE-TTSSEEEE
T ss_pred C---CcEEEEEEecCcccEEEE
Confidence 1 23 567788999998654
No 379
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=81.72 E-value=5.2 Score=20.30 Aligned_cols=47 Identities=11% Similarity=0.073 Sum_probs=28.0
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEE-EEecCC
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFI-ASAGAD 99 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d 99 (106)
..+..+|.+.-||..+++...-+. .- ...+.+++++++..+ ++-...
T Consensus 31 le~~~~GRll~ydp~t~~~~vl~~-~L----~fpNGVals~d~~~vlv~Et~~ 78 (89)
T PF03088_consen 31 LEGRPTGRLLRYDPSTKETTVLLD-GL----YFPNGVALSPDESFVLVAETGR 78 (89)
T ss_dssp HHT---EEEEEEETTTTEEEEEEE-EE----SSEEEEEE-TTSSEEEEEEGGG
T ss_pred ecCCCCcCEEEEECCCCeEEEehh-CC----CccCeEEEcCCCCEEEEEeccC
Confidence 456777888889998876332232 23 466889999999864 444433
No 380
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=81.59 E-value=2.4 Score=16.23 Aligned_cols=25 Identities=16% Similarity=0.182 Sum_probs=17.7
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
...++..+++..+++-+....|.++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3566777788877777777777654
No 381
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=79.25 E-value=3.9 Score=27.62 Aligned_cols=27 Identities=11% Similarity=0.247 Sum_probs=20.1
Q ss_pred CeEEEEEcC----CCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHP----SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~----~~~~~~s~~~d~~i~iwd 106 (106)
.+..++.++ +..++++.+.|+++|+||
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~ 246 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWS 246 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEE
Confidence 455566666 678899999999999996
No 382
>KOG1900|consensus
Probab=79.02 E-value=13 Score=28.22 Aligned_cols=90 Identities=10% Similarity=0.092 Sum_probs=43.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCC------eeEeeeCCCCceEEEeeCCCCcEEEeeCC--Ccc-chheeccc--
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPP------ACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKT-CVQEITAH-- 73 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~-~~~~~~~~-- 73 (106)
-|+.+.+|+..++....-+....|.--.+ --.|.|.-+...+++|.. .+.++-+. ... ....+..+
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~---ei~ilgV~~~~~~~~~~~f~~~~~ 173 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPV---EIVILGVSFDEFTGELSIFNTSFK 173 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccc---eEEEEEEEeccccCccccccccee
Confidence 58899999999855544444432221100 112344444443333322 24433221 111 11111111
Q ss_pred --cccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 74 --RKKFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 74 --~~~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
.. ...|.++.+..+|+.+++|-.+
T Consensus 174 i~~d--g~~V~~I~~t~nGRIF~~G~dg 199 (1311)
T KOG1900|consen 174 ISVD--GVSVNCITYTENGRIFFAGRDG 199 (1311)
T ss_pred eecC--CceEEEEEeccCCcEEEeecCC
Confidence 21 1578888888889888877544
No 383
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=78.60 E-value=12 Score=22.46 Aligned_cols=42 Identities=7% Similarity=0.401 Sum_probs=29.5
Q ss_pred CCCCcEEEeeCCCc--cchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 51 GHDCSIRLWNLDNK--TCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 51 ~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
...+.|.+|++.+. +....+. .- +.|..+.++..|+++++-=
T Consensus 35 ~~g~~Vev~~l~~~~~~~~~~F~-Tv----~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 35 ASGCKVEVYDLEQEECPLLCTFS-TV----GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred cCCCEEEEEEcccCCCceeEEEc-ch----hheeEEEeccccceEEEEE
Confidence 33456999999843 3344443 33 6889999999999998843
No 384
>KOG2444|consensus
Probab=78.48 E-value=9.6 Score=23.11 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=13.9
Q ss_pred EEeeCCCCcEEEeeCC
Q psy17135 47 DSRPGHDCSIRLWNLD 62 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~ 62 (106)
++.|+.+|.|.+|.+.
T Consensus 73 ~~vG~~dg~v~~~n~n 88 (238)
T KOG2444|consen 73 LMVGTSDGAVYVFNWN 88 (238)
T ss_pred EEeecccceEEEecCC
Confidence 6889999999999876
No 385
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=77.75 E-value=17 Score=23.89 Aligned_cols=46 Identities=15% Similarity=0.335 Sum_probs=34.2
Q ss_pred cEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 55 SIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 55 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|++|+. .|+.+..+.-.. +.+..+.|+.+.. |+....||.++++|
T Consensus 62 ~I~iys~-sG~ll~~i~w~~----~~iv~~~wt~~e~-LvvV~~dG~v~vy~ 107 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDS----GRIVGMGWTDDEE-LVVVQSDGTVRVYD 107 (410)
T ss_pred EEEEECC-CCCEeEEEEECC----CCEEEEEECCCCe-EEEEEcCCEEEEEe
Confidence 4888877 466677766555 7899999998654 55556899998875
No 386
>KOG4441|consensus
Probab=76.53 E-value=22 Score=24.59 Aligned_cols=85 Identities=11% Similarity=0.071 Sum_probs=45.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC------CcEEEeeCCCccch--heeccccccC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD------CSIRLWNLDNKTCV--QEITAHRKKF 77 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d------~~v~iwd~~~~~~~--~~~~~~~~~~ 77 (106)
-..+..||..+++.......+.... ...+. ...+.. .++|+.| ..+-.||..+.+-. ..+...+
T Consensus 300 ~~~ve~yd~~~~~w~~~a~m~~~r~-~~~~~-~~~~~l---Yv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R--- 371 (571)
T KOG4441|consen 300 LRSVECYDPKTNEWSSLAPMPSPRC-RVGVA-VLNGKL---YVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKR--- 371 (571)
T ss_pred cceeEEecCCcCcEeecCCCCcccc-cccEE-EECCEE---EEEccccCCCcccceEEEecCCCCceeccCCccCcc---
Confidence 3567888988886644444443222 12222 222322 6888888 33557777766522 2222222
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 78 DESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
...-.. .-++.+.+.|+.||.
T Consensus 372 -~~~~v~--~l~g~iYavGG~dg~ 392 (571)
T KOG4441|consen 372 -SDFGVA--VLDGKLYAVGGFDGE 392 (571)
T ss_pred -ccceeE--EECCEEEEEeccccc
Confidence 122222 226778888888864
No 387
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=76.29 E-value=17 Score=25.11 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=34.0
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
++.++..|-|++||--.......+++-. ..|-.+..+.+|.++.+.|
T Consensus 576 Ia~as~kGDirLyDRig~rAKtalP~lG----~aIk~idvta~Gk~ilaTC 622 (776)
T COG5167 576 IAAASRKGDIRLYDRIGKRAKTALPGLG----DAIKHIDVTANGKHILATC 622 (776)
T ss_pred EEEecCCCceeeehhhcchhhhcCcccc----cceeeeEeecCCcEEEEee
Confidence 6889999999999865444344455444 6788888888888865554
No 388
>PRK13616 lipoprotein LpqB; Provisional
Probab=76.24 E-value=23 Score=24.66 Aligned_cols=24 Identities=13% Similarity=-0.017 Sum_probs=17.6
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
..|..+.|||||..++... ++.+.
T Consensus 448 g~Issl~wSpDG~RiA~i~-~g~v~ 471 (591)
T PRK13616 448 GPISELQLSRDGVRAAMII-GGKVY 471 (591)
T ss_pred CCcCeEEECCCCCEEEEEE-CCEEE
Confidence 5799999999999765544 34544
No 389
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=76.06 E-value=15 Score=23.84 Aligned_cols=58 Identities=7% Similarity=0.080 Sum_probs=33.2
Q ss_pred eEeeeCCCCceEEEe--eCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 35 CQTIPSSNISLFDSR--PGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 35 ~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
..++|.+....+.++ |++...++++|+.+++.+....... .. ..+.|.+++..++...
T Consensus 129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~----~~-~~~~W~~d~~~~~y~~ 188 (414)
T PF02897_consen 129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP----KF-SSVSWSDDGKGFFYTR 188 (414)
T ss_dssp EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE----ES-EEEEECTTSSEEEEEE
T ss_pred eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc----cc-ceEEEeCCCCEEEEEE
Confidence 345566665422111 3444569999999997654332122 12 2389999887765444
No 390
>KOG3616|consensus
Probab=75.21 E-value=13 Score=27.09 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=24.0
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
...+..+|.++. ++.+..||.+.+|+.-....
T Consensus 17 ~~aiqshp~~~s---~v~~~~d~si~lfn~~~r~q 48 (1636)
T KOG3616|consen 17 TTAIQSHPGGQS---FVLAHQDGSIILFNFIPRRQ 48 (1636)
T ss_pred eeeeeecCCCce---EEEEecCCcEEEEeecccch
Confidence 344666677777 89999999999998765543
No 391
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=74.29 E-value=29 Score=24.87 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=24.1
Q ss_pred CCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPS---KPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~---~~~~~s~~~d~~i~iwd 106 (106)
..|..+.|+|. +..++.-..|+++|+||
T Consensus 147 ~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~ 177 (717)
T PF10168_consen 147 LEIKQVRWHPWSESDSHLVVLTSDNTLRLYD 177 (717)
T ss_pred ceEEEEEEcCCCCCCCeEEEEecCCEEEEEe
Confidence 57888999995 57888889999999986
No 392
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=73.54 E-value=21 Score=23.48 Aligned_cols=59 Identities=10% Similarity=0.070 Sum_probs=35.0
Q ss_pred EEeeCCCCcEEEeeCCCccchhee--ccc--cccCCCCeEEEEEcC-----CC---CEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEI--TAH--RKKFDESILDVAFHP-----SK---PFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~--~~~--~~~~~~~v~~~~~~~-----~~---~~~~s~~~d~~i~iw 105 (106)
++.|.++|.+.+.|++....+..- ..+ .......+.++.|+. |+ ..++.|...|.+.+|
T Consensus 100 vaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~f 170 (395)
T PF08596_consen 100 VAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTF 170 (395)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEE
T ss_pred EEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEE
Confidence 688899999999999876554431 110 001125677777752 22 246777777877665
No 393
>PHA02713 hypothetical protein; Provisional
Probab=72.69 E-value=28 Score=23.96 Aligned_cols=83 Identities=4% Similarity=-0.067 Sum_probs=42.2
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC------CcEEEeeCCC-cc--chheeccccccC
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD------CSIRLWNLDN-KT--CVQEITAHRKKF 77 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d------~~v~iwd~~~-~~--~~~~~~~~~~~~ 77 (106)
..+..||..+.+............ ......-.+.. .+.|+.+ ..+..||..+ .+ .+..++.+.
T Consensus 432 ~~ve~YDP~td~W~~v~~m~~~r~--~~~~~~~~~~I---Yv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r--- 503 (557)
T PHA02713 432 NKVIRYDTVNNIWETLPNFWTGTI--RPGVVSHKDDI---YVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL--- 503 (557)
T ss_pred ceEEEECCCCCeEeecCCCCcccc--cCcEEEECCEE---EEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc---
Confidence 468888988877633333322221 11112222222 3556543 2356788876 33 333443333
Q ss_pred CCCeEEEEEcCCCCEEEEecCCC
Q psy17135 78 DESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
.....+.+ ++.+.+.|+.++
T Consensus 504 -~~~~~~~~--~~~iyv~Gg~~~ 523 (557)
T PHA02713 504 -SALHTILH--DNTIMMLHCYES 523 (557)
T ss_pred -ccceeEEE--CCEEEEEeeecc
Confidence 33333333 677888888777
No 394
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=71.55 E-value=27 Score=23.25 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=29.7
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
...+.-.|.+.. .++...-|.|.++|+.++..++.+++.+
T Consensus 310 ~~~i~~sP~~~l---aA~tDslGRV~LiD~~~~~vvrmWKGYR 349 (415)
T PF14655_consen 310 GESICLSPSGRL---AAVTDSLGRVLLIDVARGIVVRMWKGYR 349 (415)
T ss_pred EEEEEECCCCCE---EEEEcCCCcEEEEECCCChhhhhhccCc
Confidence 334555666444 5666777999999999999888888776
No 395
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=71.53 E-value=22 Score=22.28 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=40.5
Q ss_pred ceEEEEeCccC----ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCe
Q psy17135 7 SVIYIWTLLEL----QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESI 81 (106)
Q Consensus 7 ~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v 81 (106)
|.|.++++... ..+...........+.++. +.... ++++. .+.+.+|++...+ ....-..+.. ..+
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~--~~~~~--lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~---~~i 132 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAIC--SFNGR--LVVAV--GNKLYVYDLDNSKTLLKKAFYDSP---FYI 132 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEE--EETTE--EEEEE--TTEEEEEEEETTSSEEEEEEE-BS---SSE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhh--hhCCE--EEEee--cCEEEEEEccCcccchhhheecce---EEE
Confidence 99999999884 1212111111122233332 33333 12333 3689999998776 3322222221 344
Q ss_pred EEEEEcCCCCEEEEecCCCeEE
Q psy17135 82 LDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
.++... +.+++.|.....+.
T Consensus 133 ~sl~~~--~~~I~vgD~~~sv~ 152 (321)
T PF03178_consen 133 TSLSVF--KNYILVGDAMKSVS 152 (321)
T ss_dssp EEEEEE--TTEEEEEESSSSEE
T ss_pred EEEecc--ccEEEEEEcccCEE
Confidence 444433 44666655444443
No 396
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=70.46 E-value=20 Score=21.19 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=42.3
Q ss_pred CCCceEEEEeCccCceeeecccCCC-CCCCCeeEeeeCCCCceEE----EeeCCCCcEEEeeCCCccchheec
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPEL-NSEPPACQTIPSSNISLFD----SRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
..=|.|.|.|+.++........+.. ...+..+.|..+....+.+ .|.+..|.+.++++.+++......
T Consensus 85 EgiGkIYIkn~~~~~~~~L~i~~~~~k~sPK~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg~~~~ly~ 157 (200)
T PF15525_consen 85 EGIGKIYIKNLNNNNWWSLQIDQNEEKYSPKYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTGNLTELYE 157 (200)
T ss_pred ccceeEEEEecCCCceEEEEecCcccccCCceeEEecCCcEEEEEccccceEccCCeEEEEEccCCceeEeee
Confidence 3457899999998887433333222 2234457888877765221 123566778899999887544444
No 397
>KOG1832|consensus
Probab=68.29 E-value=10 Score=28.02 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=29.8
Q ss_pred hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 67 VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+..+. ...+|++|+-+.++++.|+-.|.|+++.
T Consensus 1094 w~~frd~~----~~fTc~afs~~~~hL~vG~~~Geik~~n 1129 (1516)
T KOG1832|consen 1094 WRSFRDET----ALFTCIAFSGGTNHLAVGSHAGEIKIFN 1129 (1516)
T ss_pred chhhhccc----cceeeEEeecCCceEEeeeccceEEEEE
Confidence 34455555 7899999999999999999999999873
No 398
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=68.27 E-value=28 Score=22.20 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=28.7
Q ss_pred eEeeeCCCCceEEEeeCCCCcEEEe--eCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 35 CQTIPSSNISLFDSRPGHDCSIRLW--NLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 35 ~~~~~~~~~~~~~~s~~~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
..+.+.+....|.++...-..-.+| ++..+..+..+.... ..-..+.|||++.+++-.+
T Consensus 286 ~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~----~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 286 LGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCED----GDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTS----STTEEEEE-TTSSEEEEEE
T ss_pred ceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCC----CCceEEEECCCCCEEEEEE
Confidence 4455555554333333222333344 555233344554443 1226889999999865443
No 399
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=68.14 E-value=11 Score=17.30 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=14.8
Q ss_pred CeEEEEEcCCCCEEEEecC
Q psy17135 80 SILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~ 98 (106)
.+..++..|+++++++|..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 4567888899999888853
No 400
>KOG2247|consensus
Probab=66.66 E-value=6.6 Score=26.68 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=48.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+.+.+||+.+.... .+.... +..-....|.+.... ++-+...+.+.+++..+.+.+-..-.|. .++.+.
T Consensus 95 k~~piylwd~n~eytq-qLE~gg-~~s~sll~wsKg~~e---l~ig~~~gn~viynhgtsR~iiv~Gkh~----RRgtq~ 165 (615)
T KOG2247|consen 95 KTGPIYLWDVNSEYTQ-QLESGG-TSSKSLLAWSKGTPE---LVIGNNAGNIVIYNHGTSRRIIVMGKHQ----RRGTQI 165 (615)
T ss_pred cCCCeeechhhhhhHH-HHhccC-cchHHHHhhccCCcc---ccccccccceEEEeccchhhhhhhcccc----cceeEE
Confidence 3567899998753320 111111 111222667776666 6778888899999887665443343355 688888
Q ss_pred EEcCCCCE
Q psy17135 85 AFHPSKPF 92 (106)
Q Consensus 85 ~~~~~~~~ 92 (106)
++.+.+..
T Consensus 166 av~lEd~v 173 (615)
T KOG2247|consen 166 AVTLEDYV 173 (615)
T ss_pred Eeccccee
Confidence 88886543
No 401
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=66.05 E-value=29 Score=21.57 Aligned_cols=89 Identities=4% Similarity=-0.072 Sum_probs=47.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
....|+.+|+.+++.+.....+. ....- +... .+ . .+.+| =.++...+||..+-+.+.++.-. ..=+.
T Consensus 66 G~S~l~~~d~~tg~~~~~~~l~~--~~FgEGit~~-~d-~-l~qLT-Wk~~~~f~yd~~tl~~~~~~~y~-----~EGWG 134 (264)
T PF05096_consen 66 GQSSLRKVDLETGKVLQSVPLPP--RYFGEGITIL-GD-K-LYQLT-WKEGTGFVYDPNTLKKIGTFPYP-----GEGWG 134 (264)
T ss_dssp TEEEEEEEETTTSSEEEEEE-TT--T--EEEEEEE-TT-E-EEEEE-SSSSEEEEEETTTTEEEEEEE-S-----SS--E
T ss_pred CcEEEEEEECCCCcEEEEEECCc--cccceeEEEE-CC-E-EEEEE-ecCCeEEEEccccceEEEEEecC-----CcceE
Confidence 34679999999998876666642 11211 2222 12 2 22234 44678899999887777776533 23355
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++ .++..++.+.....++++|
T Consensus 135 Lt--~dg~~Li~SDGS~~L~~~d 155 (264)
T PF05096_consen 135 LT--SDGKRLIMSDGSSRLYFLD 155 (264)
T ss_dssp EE--ECSSCEEEE-SSSEEEEE-
T ss_pred EE--cCCCEEEEECCccceEEEC
Confidence 55 3455555554455555543
No 402
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=65.10 E-value=32 Score=21.67 Aligned_cols=61 Identities=11% Similarity=0.236 Sum_probs=35.1
Q ss_pred EEEeeCCCCcEEEeeCCCccchheeccccc-cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 46 FDSRPGHDCSIRLWNLDNKTCVQEITAHRK-KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 46 ~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|+|.-.-..|.+.+.++|+.+..+.+... -....-...++..+-+++-.+..++.|.++|
T Consensus 157 yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 157 YLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred EEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
Confidence 378887778888888888888777765521 0000011133333444444455666777765
No 403
>KOG3630|consensus
Probab=64.55 E-value=34 Score=26.16 Aligned_cols=60 Identities=12% Similarity=0.070 Sum_probs=37.7
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEE
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIA 94 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 94 (106)
...++.|.|.+.. ++.|...|++.-|... .+....+...+-.-..+|.++.|-....+++
T Consensus 200 ~~Tav~WSprGKQ---l~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 200 SQTAVLWSPRGKQ---LFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred ceeeEEeccccce---eeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 4677899999998 7889999998877543 3322223222111015788888865555443
No 404
>KOG2114|consensus
Probab=63.55 E-value=58 Score=24.06 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=27.1
Q ss_pred EEeeCCCCcEEEeeCC--CccchheeccccccCCCCeEEEEEcCCCCE
Q psy17135 47 DSRPGHDCSIRLWNLD--NKTCVQEITAHRKKFDESILDVAFHPSKPF 92 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 92 (106)
++.|..+|.|..+.-+ ..+-.+....|..+ ..|+.+++.-++..
T Consensus 140 Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~--~pITgL~~~~d~~s 185 (933)
T KOG2114|consen 140 IVCGFTNGLVICYKGDILRDRGSRQDYSHRGK--EPITGLALRSDGKS 185 (933)
T ss_pred EEEEecCcEEEEEcCcchhccccceeeeccCC--CCceeeEEecCCce
Confidence 7889999998877422 11222333334332 68898888766654
No 405
>KOG1897|consensus
Probab=63.11 E-value=63 Score=24.35 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=34.1
Q ss_pred eeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 49 RPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 49 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
-++-...|+++++.+++.++.-..+. ..+..+...-.+..++.|.--+.+
T Consensus 843 lA~In~~vrLye~t~~~eLr~e~~~~----~~~~aL~l~v~gdeI~VgDlm~Si 892 (1096)
T KOG1897|consen 843 LAGINQSVRLYEWTTERELRIECNIS----NPIIALDLQVKGDEIAVGDLMRSI 892 (1096)
T ss_pred EEecCcEEEEEEccccceehhhhccc----CCeEEEEEEecCcEEEEeeccceE
Confidence 34445789999999887666655555 566777776667777776654444
No 406
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.60 E-value=38 Score=21.62 Aligned_cols=68 Identities=6% Similarity=-0.035 Sum_probs=40.5
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
..+..+.|+|.... |.+........++=...|+.++.++-..- .....+.|..++.+.++--+++.+.
T Consensus 86 ~nvS~LTynp~~rt---LFav~n~p~~iVElt~~GdlirtiPL~g~---~DpE~Ieyig~n~fvi~dER~~~l~ 153 (316)
T COG3204 86 ANVSSLTYNPDTRT---LFAVTNKPAAIVELTKEGDLIRTIPLTGF---SDPETIEYIGGNQFVIVDERDRALY 153 (316)
T ss_pred ccccceeeCCCcce---EEEecCCCceEEEEecCCceEEEeccccc---CChhHeEEecCCEEEEEehhcceEE
Confidence 34667899999888 66666666666665556887777653221 2334455555555555544454443
No 407
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=60.10 E-value=21 Score=23.49 Aligned_cols=91 Identities=10% Similarity=0.022 Sum_probs=39.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC--CCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS--NISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.+..++++...+.+..++.. . .......+.+.+.. .....|++-..+|.++++.+..-+.+..+.-+.......+.
T Consensus 233 Se~~irv~~~~~~k~~~K~~-~-~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~ 310 (395)
T PF08596_consen 233 SESDIRVFKPPKSKGAHKSF-D-DPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLS 310 (395)
T ss_dssp -SSEEEEE-TT---EEEEE--S-S-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHT
T ss_pred cccceEEEeCCCCcccceee-c-cccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccc
Confidence 35678888887777644333 1 11111123443211 12333778889999999999876655544432210001223
Q ss_pred EEEEcCCCCEEEEec
Q psy17135 83 DVAFHPSKPFIASAG 97 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~ 97 (106)
...++++|..+.-.+
T Consensus 311 ~ssis~~Gdi~~~~g 325 (395)
T PF08596_consen 311 SSSISRNGDIFYWTG 325 (395)
T ss_dssp T-EE-TTS-EEEE-S
T ss_pred ccEECCCCCEEEEeC
Confidence 345566776654444
No 408
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=60.01 E-value=28 Score=22.05 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=17.2
Q ss_pred CCeEEEEEcCCCCEEEEe-cCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASA-GADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~-~~d~~i~iw 105 (106)
...+.++||||++.+..+ +..+.+.-+
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 455789999999765444 444555443
No 409
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=58.74 E-value=45 Score=21.20 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=16.0
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
.++..+.|.|++...+.+ +.+.++.
T Consensus 187 ~riq~~gf~~~~~lw~~~-~Gg~~~~ 211 (302)
T PF14870_consen 187 RRIQSMGFSPDGNLWMLA-RGGQIQF 211 (302)
T ss_dssp S-EEEEEE-TTS-EEEEE-TTTEEEE
T ss_pred ceehhceecCCCCEEEEe-CCcEEEE
Confidence 689999999998775544 6666653
No 410
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=58.62 E-value=28 Score=23.16 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=22.2
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.++..+|++.+.+....-|+|.++|
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD 335 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLID 335 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 3577889999988888877778887765
No 411
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=57.56 E-value=60 Score=22.33 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=37.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCC--eeEeee-----CCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPP--ACQTIP-----SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.++.|.-.|.++++.+-++.......... .+.... .+.. ++.++.++.+...|.++|+.+-...
T Consensus 77 ~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~---v~v~t~dg~l~ALDa~TGk~~W~~~ 147 (527)
T TIGR03075 77 SYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGK---VFFGTLDARLVALDAKTGKVVWSKK 147 (527)
T ss_pred CCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCE---EEEEcCCCEEEEEECCCCCEEeecc
Confidence 45778889999998866655422111000 010000 1122 4567778899999999998765543
No 412
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=56.69 E-value=35 Score=24.51 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.9
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK 64 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~ 64 (106)
.+..+.|+|.+.....++.=..|+.+|+||+...
T Consensus 148 ~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 148 EIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred eEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 3456899999754444777788999999999754
No 413
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=56.27 E-value=48 Score=20.76 Aligned_cols=63 Identities=10% Similarity=-0.020 Sum_probs=35.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCC----CCeeEeeeCCC-C--ceEEEeeCCCCcEEEeeCCCccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSE----PPACQTIPSSN-I--SLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~--~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
....+|.+||+++.+.+.++..+..... ...+....... . ....++-+....+-++|+.+++.
T Consensus 31 ~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s 100 (287)
T PF03022_consen 31 VCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKS 100 (287)
T ss_dssp TS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEE
T ss_pred CCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcE
Confidence 4457899999999999888877643221 22222222221 1 22235555556788999998764
No 414
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=55.61 E-value=46 Score=22.04 Aligned_cols=58 Identities=10% Similarity=-0.128 Sum_probs=23.4
Q ss_pred EEeCccCceeeecccCCC---CCCCCeeEeeeCCCCceEEEeeCCCCcEE--EeeCCCccchheec
Q psy17135 11 IWTLLELQTYARNDCPEL---NSEPPACQTIPSSNISLFDSRPGHDCSIR--LWNLDNKTCVQEIT 71 (106)
Q Consensus 11 iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d~~v~--iwd~~~~~~~~~~~ 71 (106)
.-|-.||..+.++..... +-....-.|.+.+... +..+..++.-. +.|+.+++. .++.
T Consensus 14 ~~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kl--lF~s~~dg~~nly~lDL~t~~i-~QLT 76 (386)
T PF14583_consen 14 WIDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKL--LFASDFDGNRNLYLLDLATGEI-TQLT 76 (386)
T ss_dssp EE-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EE--EEEE-TTSS-EEEEEETTT-EE-EE--
T ss_pred EeCCCCCceEEEecCCCCcccceeecCCCcCCCCCEE--EEEeccCCCcceEEEEcccCEE-EECc
Confidence 446677877666655432 2234445566777665 44555565544 557777663 3443
No 415
>KOG2280|consensus
Probab=55.46 E-value=79 Score=23.09 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=36.9
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN 63 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~ 63 (106)
+...|+|+++. |+.+.+.... +.....+.|+.... |.....+|++.++++-.
T Consensus 62 a~~~I~If~~s-G~lL~~~~w~--~~~lI~mgWs~~ee----LI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 62 ARPYIRIFNIS-GQLLGRILWK--HGELIGMGWSDDEE----LICVQKDGTVHVYGLLG 113 (829)
T ss_pred cceeEEEEecc-ccchHHHHhc--CCCeeeecccCCce----EEEEeccceEEEeecch
Confidence 44568888885 5555555554 33567788887665 57788899999999864
No 416
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=54.89 E-value=38 Score=19.25 Aligned_cols=27 Identities=19% Similarity=0.429 Sum_probs=21.8
Q ss_pred CCeEEEEEcCCC------CEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSK------PFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~------~~~~s~~~d~~i~iw 105 (106)
..+..++|||.| ..|+....++.+.+|
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~ 118 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLY 118 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEE
Confidence 378889999843 478888899999887
No 417
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=54.88 E-value=49 Score=20.77 Aligned_cols=40 Identities=10% Similarity=0.227 Sum_probs=23.7
Q ss_pred CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
..+++||..+.+-...-..-. +.|..+.|..+...+++|.
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~----G~V~~l~~~~~~~Llv~G~ 55 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGIS----GTVTDLQWASNNQLLVGGN 55 (281)
T ss_pred CEEEEEECCCCEeecCCCCce----EEEEEEEEecCCEEEEEEe
Confidence 457888877655332222222 6788888875555566554
No 418
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=54.29 E-value=17 Score=14.90 Aligned_cols=17 Identities=6% Similarity=-0.134 Sum_probs=12.2
Q ss_pred EEeeCCCCcEEEeeCCC
Q psy17135 47 DSRPGHDCSIRLWNLDN 63 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~ 63 (106)
+..++.|+.+..+|.++
T Consensus 24 vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 24 VYVGTGDGNLYALDAAT 40 (40)
T ss_dssp EEEE-TTSEEEEEETT-
T ss_pred EEEEcCCCEEEEEeCCC
Confidence 57778899999888753
No 419
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=53.31 E-value=57 Score=20.79 Aligned_cols=54 Identities=22% Similarity=0.113 Sum_probs=31.3
Q ss_pred EEeeCCCCcEEEeeCCCccchh---eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQ---EITAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
+++.-..+.|....++.+..+. .+.... ..++..+++.|||.++++...+|.|.
T Consensus 274 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 274 FVADYGGGRIWRLDLDEDGSVTEEEEFLGGF---GGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEEECTTS---SS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred EEecCCCCEEEEEeeecCCCccceEEccccC---CCCceEEEEcCCCeEEEEECCCCeEe
Confidence 4444445566655665332221 111112 14789999999999988888888774
No 420
>KOG2280|consensus
Probab=53.08 E-value=81 Score=23.05 Aligned_cols=47 Identities=17% Similarity=0.344 Sum_probs=33.7
Q ss_pred CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..++|++. +|+.+..+.... ..+..+.|+.+...+ ....+|++++++
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~----~~lI~mgWs~~eeLI-~v~k~g~v~Vy~ 110 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKH----GELIGMGWSDDEELI-CVQKDGTVHVYG 110 (829)
T ss_pred eeEEEEec-cccchHHHHhcC----CCeeeecccCCceEE-EEeccceEEEee
Confidence 45778877 577777776655 578888999876544 445788888764
No 421
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=51.86 E-value=92 Score=22.77 Aligned_cols=66 Identities=9% Similarity=-0.036 Sum_probs=41.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCC------CCeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSE------PPACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
..+.|.-.|.++|+..-.+..-+|... ...+.-.+ .+....+++.+..+|.+.++|-++|+.+...
T Consensus 412 y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 412 YSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred ccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 356788899999998665554332211 12222122 2322334788999999999999999876543
No 422
>PHA03098 kelch-like protein; Provisional
Probab=51.77 E-value=74 Score=21.63 Aligned_cols=13 Identities=8% Similarity=0.013 Sum_probs=9.4
Q ss_pred ceEEEEeCccCce
Q psy17135 7 SVIYIWTLLELQT 19 (106)
Q Consensus 7 ~~i~iwd~~~~~~ 19 (106)
..+..||..+.+.
T Consensus 406 ~~v~~yd~~t~~W 418 (534)
T PHA03098 406 KTVECFSLNTNKW 418 (534)
T ss_pred ceEEEEeCCCCee
Confidence 4577888877665
No 423
>KOG2377|consensus
Probab=51.42 E-value=79 Score=21.84 Aligned_cols=27 Identities=11% Similarity=0.154 Sum_probs=23.8
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.|.++.||+|.+.+|.--.+.+|.++
T Consensus 67 G~I~SIkFSlDnkilAVQR~~~~v~f~ 93 (657)
T KOG2377|consen 67 GEIKSIKFSLDNKILAVQRTSKTVDFC 93 (657)
T ss_pred CceeEEEeccCcceEEEEecCceEEEE
Confidence 789999999999999998888887654
No 424
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=51.04 E-value=38 Score=18.09 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=18.6
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||+.+|+++..+..+.
T Consensus 39 ~~E~V~I~Nv~NG~Rf~TYvI~g 61 (111)
T cd06919 39 PYEKVLVVNVNNGARFETYVIPG 61 (111)
T ss_pred CCCEEEEEECCCCcEEEEEEEEc
Confidence 44679999999999988877653
No 425
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=49.78 E-value=98 Score=22.49 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=36.0
Q ss_pred EEeeCCCCcEEEeeCCCcc-chhe-----------------eccccccCCCCeEEEEEc--CCCCEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKT-CVQE-----------------ITAHRKKFDESILDVAFH--PSKPFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~-~~~~-----------------~~~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~i~iw 105 (106)
|+.+..||.|.+|-.+.-. .+.. +.-.. ...++.++++ ...+++|.++....|.+|
T Consensus 117 Ll~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v---~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 117 LLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV---GASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred EEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec---CCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 5788899999999653210 0000 11111 2578889998 777788888877777765
No 426
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=49.36 E-value=46 Score=22.39 Aligned_cols=49 Identities=12% Similarity=0.012 Sum_probs=28.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD 62 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~ 62 (106)
++.|.+||..+++.+.+.... .+..+.|++.+.. ++-.+. ..+.+++.+
T Consensus 125 ~~~i~~yDw~~~~~i~~i~v~----~vk~V~Ws~~g~~---val~t~-~~i~il~~~ 173 (443)
T PF04053_consen 125 SDFICFYDWETGKLIRRIDVS----AVKYVIWSDDGEL---VALVTK-DSIYILKYN 173 (443)
T ss_dssp TTEEEEE-TTT--EEEEESS-----E-EEEEE-TTSSE---EEEE-S--SEEEEEE-
T ss_pred CCCEEEEEhhHcceeeEEecC----CCcEEEEECCCCE---EEEEeC-CeEEEEEec
Confidence 446999999999997777762 2567889988776 444443 467776654
No 427
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=49.15 E-value=44 Score=18.30 Aligned_cols=23 Identities=4% Similarity=-0.054 Sum_probs=18.8
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||+.+|+++..+..+.
T Consensus 40 p~E~V~V~Nv~NG~Rf~TYvI~g 62 (126)
T PRK05449 40 ENEKVQIVNVNNGARFETYVIAG 62 (126)
T ss_pred CCCEEEEEECCCCcEEEEEEEEc
Confidence 45679999999999988887754
No 428
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=48.36 E-value=19 Score=13.89 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=18.6
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+++..+ .+++.+...+.+|+|.
T Consensus 2 E~i~aia~g~--~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD--SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC--CEEEEEeCCCeEEecC
Confidence 3567777654 4778887888888873
No 429
>KOG3616|consensus
Probab=48.17 E-value=42 Score=24.71 Aligned_cols=26 Identities=23% Similarity=0.257 Sum_probs=18.8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.+.++.-+|.+..+++++.||.+++|
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lf 41 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILF 41 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEE
Confidence 45566667777778888888877765
No 430
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=48.03 E-value=98 Score=23.42 Aligned_cols=21 Identities=5% Similarity=-0.015 Sum_probs=17.1
Q ss_pred CCeEEEEEcCCCCEEEEecCC
Q psy17135 79 ESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d 99 (106)
-.|.|+.-+.+|+.+++|-.|
T Consensus 182 inV~civs~e~GrIFf~g~~d 202 (1263)
T COG5308 182 INVRCIVSEEDGRIFFGGEND 202 (1263)
T ss_pred ceeEEEEeccCCcEEEecCCC
Confidence 567777777789999999877
No 431
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=47.54 E-value=7.4 Score=14.44 Aligned_cols=7 Identities=29% Similarity=0.710 Sum_probs=4.3
Q ss_pred EcCCCCE
Q psy17135 86 FHPSKPF 92 (106)
Q Consensus 86 ~~~~~~~ 92 (106)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 5676654
No 432
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=47.54 E-value=47 Score=18.13 Aligned_cols=23 Identities=4% Similarity=-0.054 Sum_probs=18.6
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||..+|+.+..+....
T Consensus 39 e~EkV~I~N~nNGaRf~TYvI~g 61 (126)
T COG0853 39 ENEKVDIVNVNNGARFSTYVIAG 61 (126)
T ss_pred CCceEEEEECCCCcEEEEEEEEc
Confidence 45689999999999988876644
No 433
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=45.66 E-value=71 Score=19.66 Aligned_cols=69 Identities=10% Similarity=-0.027 Sum_probs=34.2
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-----CCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-----FDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
...+.++|..... ++-...++.+...| .+|+.+..+.-.... .=.+...++|.++|..++++= .+..+.
T Consensus 173 ~S~l~~~p~t~~l--liLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsE-pNlfy~ 246 (248)
T PF06977_consen 173 LSGLSYDPRTGHL--LILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSE-PNLFYR 246 (248)
T ss_dssp --EEEEETTTTEE--EEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEET-TTEEEE
T ss_pred ccceEEcCCCCeE--EEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcC-CceEEE
Confidence 4557777765553 45567777888888 456554433211100 003577899999998776663 444443
No 434
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=44.60 E-value=71 Score=19.34 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=30.7
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
++.|.++| +.+++.........+... ..|..+...|+-..++.-+ |+.+.++
T Consensus 10 L~vGt~~G-l~~~~~~~~~~~~~i~~~-----~~I~ql~vl~~~~~llvLs-d~~l~~~ 61 (275)
T PF00780_consen 10 LLVGTEDG-LYVYDLSDPSKPTRILKL-----SSITQLSVLPELNLLLVLS-DGQLYVY 61 (275)
T ss_pred EEEEECCC-EEEEEecCCccceeEeec-----ceEEEEEEecccCEEEEEc-CCccEEE
Confidence 67778888 888888333222233222 3477777777666655543 4666655
No 435
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=44.20 E-value=9.6 Score=25.46 Aligned_cols=16 Identities=13% Similarity=0.378 Sum_probs=8.8
Q ss_pred CCCceEEEEeCccCce
Q psy17135 4 VPSSVIYIWTLLELQT 19 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~ 19 (106)
.++|.|++||++....
T Consensus 149 ~~~GVVrvWDvkd~~l 164 (533)
T PF00843_consen 149 GRNGVVRVWDVKDPSL 164 (533)
T ss_dssp -SSSEE-SEE-S-GGG
T ss_pred CCCCeEEEEecCCHHH
Confidence 4678888888876553
No 436
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=44.02 E-value=55 Score=17.93 Aligned_cols=23 Identities=4% Similarity=0.008 Sum_probs=18.7
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.+||+.+|+.+..+..+.
T Consensus 40 p~E~V~V~Nv~NG~Rf~TYvI~G 62 (126)
T TIGR00223 40 ENEKVDIVNVNNGKRFSTYAIAG 62 (126)
T ss_pred CCCEEEEEECCCCcEEEEEEEEc
Confidence 45679999999999988877654
No 437
>KOG4460|consensus
Probab=43.20 E-value=1.2e+02 Score=21.48 Aligned_cols=27 Identities=22% Similarity=0.596 Sum_probs=20.1
Q ss_pred CeEEEEEcCCC---CEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSK---PFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~---~~~~s~~~d~~i~iwd 106 (106)
.+.-++|+|+. ..+..-..|..+|+|+
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~ 196 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYS 196 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEe
Confidence 44557899954 5677777899999985
No 438
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.73 E-value=92 Score=20.10 Aligned_cols=92 Identities=10% Similarity=0.001 Sum_probs=51.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC------------------CCCcEEEeeCCCc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG------------------HDCSIRLWNLDNK 64 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~------------------~d~~v~iwd~~~~ 64 (106)
+.+-|.|=|||.+.+-. ..-....+.-+...+.+.+++... +.++ +.-++-+.|..+|
T Consensus 136 d~~rGViGvYd~r~~fq-rvgE~~t~GiGpHev~lm~DGrtl---vvanGGIethpdfgR~~lNldsMePSlvlld~atG 211 (366)
T COG3490 136 DPNRGVIGVYDAREGFQ-RVGEFSTHGIGPHEVTLMADGRTL---VVANGGIETHPDFGRTELNLDSMEPSLVLLDAATG 211 (366)
T ss_pred CCCCceEEEEecccccc-eecccccCCcCcceeEEecCCcEE---EEeCCceecccccCccccchhhcCccEEEEecccc
Confidence 34668899999874222 123333344456668888888873 3322 1222334454555
Q ss_pred cchheeccccccCCCCeEEEEEcCCCCEEEEecC
Q psy17135 65 TCVQEITAHRKKFDESILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 65 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~ 98 (106)
..+.+..-....+...+..++.-+++..++.|-.
T Consensus 212 ~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 212 NLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred chhhhccCchhhhhcceeeeeeCCCCcEEEEEEe
Confidence 5544433222112256778888888887766543
No 439
>KOG4441|consensus
Probab=42.64 E-value=1.2e+02 Score=21.31 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=43.8
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-----EEEeeCCCccc--hheeccccccCCC
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-----IRLWNLDNKTC--VQEITAHRKKFDE 79 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-----v~iwd~~~~~~--~~~~~~~~~~~~~ 79 (106)
.++..||-.+.+............ ......-.+.. .+.|+.|+. |..+|..+.+- +....... .
T Consensus 444 ~sve~YDP~t~~W~~~~~M~~~R~--~~g~a~~~~~i---YvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~r----s 514 (571)
T KOG4441|consen 444 NSVECYDPETNTWTLIAPMNTRRS--GFGVAVLNGKI---YVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPR----S 514 (571)
T ss_pred ceEEEEcCCCCceeecCCcccccc--cceEEEECCEE---EEECCccCCCccceEEEEcCCCCceeEcccCcccc----c
Confidence 578888888887744444432222 11122222322 577776653 66688776543 22222222 3
Q ss_pred CeEEEEEcCCCCEEEEecCCCe
Q psy17135 80 SILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
.+..+.. ++...+.|+.|+.
T Consensus 515 ~~g~~~~--~~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 515 AVGVVVL--GGKLYAVGGFDGN 534 (571)
T ss_pred cccEEEE--CCEEEEEecccCc
Confidence 3333333 4667788887764
No 440
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=42.26 E-value=1.1e+02 Score=20.80 Aligned_cols=66 Identities=6% Similarity=-0.058 Sum_probs=36.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee---------CCCCcEEEeeCCCccchheec
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP---------GHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---------~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.++.|.-+|.++++.+-++...........+.-.|.-.... ++.+ ..++.+..+|..+|+.+-.+.
T Consensus 118 ~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~-v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~ 192 (488)
T cd00216 118 FDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKL-VIIGSSGAEFFACGVRGALRAYDVETGKLLWRFY 192 (488)
T ss_pred CCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCE-EEEeccccccccCCCCcEEEEEECCCCceeeEee
Confidence 47889999999999876665532200000011111111111 2233 246788889999998766554
No 441
>KOG0088|consensus
Probab=37.85 E-value=39 Score=19.53 Aligned_cols=18 Identities=6% Similarity=0.362 Sum_probs=13.0
Q ss_pred EeeCCCCcEEEeeCCCcc
Q psy17135 48 SRPGHDCSIRLWNLDNKT 65 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~ 65 (106)
.--+.+|.+.+||+....
T Consensus 82 YYRgSnGalLVyDITDrd 99 (218)
T KOG0088|consen 82 YYRGSNGALLVYDITDRD 99 (218)
T ss_pred EEeCCCceEEEEeccchH
Confidence 445667889999987653
No 442
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=37.51 E-value=70 Score=17.28 Aligned_cols=23 Identities=9% Similarity=0.145 Sum_probs=16.2
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.+||+.+|+.+..+..+.
T Consensus 40 p~E~V~V~Nv~nG~Rf~TYvI~g 62 (116)
T PF02261_consen 40 PYEQVQVVNVNNGERFETYVIPG 62 (116)
T ss_dssp TTBEEEEEETTT--EEEEEEEEE
T ss_pred cCCEEEEEECCCCcEEEEEEEEc
Confidence 44679999999999888776643
No 443
>PF14782 BBS2_C: Ciliary BBSome complex subunit 2, C-terminal
Probab=37.10 E-value=64 Score=21.75 Aligned_cols=26 Identities=8% Similarity=-0.148 Sum_probs=18.1
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEe
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLW 59 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iw 59 (106)
+....|-..+... ++.++.||.|+-|
T Consensus 17 vv~~DYR~dG~~~--lI~csvdGeVrGy 42 (431)
T PF14782_consen 17 VVVADYRMDGKPQ--LICCSVDGEVRGY 42 (431)
T ss_pred eeeeccccCCCce--EEEEEcCCEEEEe
Confidence 3344455555443 7889999999999
No 444
>PHA02713 hypothetical protein; Provisional
Probab=37.03 E-value=1.4e+02 Score=20.73 Aligned_cols=14 Identities=14% Similarity=-0.007 Sum_probs=9.9
Q ss_pred ceEEEEeCccCcee
Q psy17135 7 SVIYIWTLLELQTY 20 (106)
Q Consensus 7 ~~i~iwd~~~~~~~ 20 (106)
.++..||..+.+..
T Consensus 367 ~sve~Ydp~~~~W~ 380 (557)
T PHA02713 367 RTIECYTMGDDKWK 380 (557)
T ss_pred ceEEEEECCCCeEE
Confidence 35788888877653
No 445
>KOG4460|consensus
Probab=36.83 E-value=92 Score=21.95 Aligned_cols=42 Identities=19% Similarity=0.092 Sum_probs=27.9
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
..+.|+|.+-.-..++.-..|..+|+||...-+.+....+..
T Consensus 169 ~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~telylqpgep 210 (741)
T KOG4460|consen 169 KQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTELYLQPGEP 210 (741)
T ss_pred eeccccCCccCCceEEEEecCcEEEEEecCCcchhhccCCCc
Confidence 447899987222225666778999999987766665554444
No 446
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=34.25 E-value=1.2e+02 Score=19.02 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=32.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
.++...+||..+.+.+..+..+ ...-.+. ..+.. +....-...+..+|..+-+..+.+
T Consensus 108 k~~~~f~yd~~tl~~~~~~~y~---~EGWGLt--~dg~~---Li~SDGS~~L~~~dP~~f~~~~~i 165 (264)
T PF05096_consen 108 KEGTGFVYDPNTLKKIGTFPYP---GEGWGLT--SDGKR---LIMSDGSSRLYFLDPETFKEVRTI 165 (264)
T ss_dssp SSSEEEEEETTTTEEEEEEE-S---SS--EEE--ECSSC---EEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred cCCeEEEEccccceEEEEEecC---CcceEEE--cCCCE---EEEECCccceEEECCcccceEEEE
Confidence 4678899999999988777664 2222222 33444 333333456888887765444433
No 447
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=33.35 E-value=1.9e+02 Score=21.14 Aligned_cols=58 Identities=10% Similarity=0.178 Sum_probs=32.6
Q ss_pred EEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEEEEcCCC---C---EEEEecCCCeEEEcC
Q psy17135 47 DSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDVAFHPSK---P---FIASAGADGLAKVFV 106 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~---~---~~~s~~~d~~i~iwd 106 (106)
+|.++....|.+|-.... ........+. +...|.+++|-++. . .+++++=.|.+.+|+
T Consensus 180 IAVSsNs~~VTVFaf~l~~~r~~~~~s~~--~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~ 244 (717)
T PF08728_consen 180 IAVSSNSQEVTVFAFALVDERFYHVPSHQ--HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFK 244 (717)
T ss_pred EEEecCCceEEEEEEeccccccccccccc--cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEE
Confidence 677777777777754431 1111111111 12678888886533 2 677888888776653
No 448
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=32.29 E-value=35 Score=12.93 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=7.9
Q ss_pred CCceEEEEeCc
Q psy17135 5 PSSVIYIWTLL 15 (106)
Q Consensus 5 ~d~~i~iwd~~ 15 (106)
.|..|.-||.-
T Consensus 13 sdksi~hwdf~ 23 (28)
T PRK14751 13 SDKSIYHWDFY 23 (28)
T ss_pred CcCceeeeeeh
Confidence 47778888863
No 449
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=30.69 E-value=90 Score=20.56 Aligned_cols=28 Identities=29% Similarity=0.490 Sum_probs=21.6
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+..++..+..+.+.+...++.|.+|+
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~ 217 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWD 217 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEE
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEE
Confidence 3477888888778899999999999996
No 450
>KOG1520|consensus
Probab=30.13 E-value=1e+02 Score=20.42 Aligned_cols=44 Identities=11% Similarity=0.070 Sum_probs=25.5
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEe
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASA 96 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~ 96 (106)
+.+..+|.+.-+|..+.. .+.+-..- ...+.++.||++..++.|
T Consensus 193 l~g~~~GRl~~YD~~tK~-~~VLld~L----~F~NGlaLS~d~sfvl~~ 236 (376)
T KOG1520|consen 193 LEGDPTGRLFRYDPSTKV-TKVLLDGL----YFPNGLALSPDGSFVLVA 236 (376)
T ss_pred ecCCCccceEEecCcccc-hhhhhhcc----cccccccCCCCCCEEEEE
Confidence 445566776667765443 22232222 455677889988876554
No 451
>KOG1916|consensus
Probab=29.26 E-value=1.8e+02 Score=22.21 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=22.2
Q ss_pred eeeCCCCceEEEeeCCCCcEEEeeCC-Cc----cchheecccc
Q psy17135 37 TIPSSNISLFDSRPGHDCSIRLWNLD-NK----TCVQEITAHR 74 (106)
Q Consensus 37 ~~~~~~~~~~~~s~~~d~~v~iwd~~-~~----~~~~~~~~~~ 74 (106)
.+|++.. ++..+.||.++.|.+. +| .|+.....|.
T Consensus 243 lSpDGtv---~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd 282 (1283)
T KOG1916|consen 243 LSPDGTV---FAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD 282 (1283)
T ss_pred eCCCCcE---EEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence 4555555 7888888888888654 23 3455555554
No 452
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=28.12 E-value=2.2e+02 Score=20.20 Aligned_cols=18 Identities=22% Similarity=0.418 Sum_probs=15.3
Q ss_pred CCCEEEEecCCCeEEEcC
Q psy17135 89 SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 89 ~~~~~~s~~~d~~i~iwd 106 (106)
..-+++.++..|.|++||
T Consensus 572 esGyIa~as~kGDirLyD 589 (776)
T COG5167 572 ESGYIAAASRKGDIRLYD 589 (776)
T ss_pred cCceEEEecCCCceeeeh
Confidence 345899999999999987
No 453
>PHA03098 kelch-like protein; Provisional
Probab=27.68 E-value=2e+02 Score=19.61 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=8.9
Q ss_pred ceEEEEeCccCce
Q psy17135 7 SVIYIWTLLELQT 19 (106)
Q Consensus 7 ~~i~iwd~~~~~~ 19 (106)
..+..||..+.+.
T Consensus 358 ~~v~~yd~~~~~W 370 (534)
T PHA03098 358 NTVESWKPGESKW 370 (534)
T ss_pred ceEEEEcCCCCce
Confidence 4567788777665
No 454
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=27.05 E-value=58 Score=14.46 Aligned_cols=11 Identities=18% Similarity=0.664 Sum_probs=7.8
Q ss_pred eeCCCCcEEEe
Q psy17135 49 RPGHDCSIRLW 59 (106)
Q Consensus 49 s~~~d~~v~iw 59 (106)
.--.+|.|++|
T Consensus 40 ~N~dnG~vRiW 50 (51)
T PF09081_consen 40 VNEDNGQVRIW 50 (51)
T ss_dssp EEETTTTEEEE
T ss_pred hhccCCcEEee
Confidence 34456889998
No 455
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=26.98 E-value=1.2e+02 Score=20.63 Aligned_cols=27 Identities=11% Similarity=0.148 Sum_probs=16.9
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..-+.++|.|+++++++--..|.|+++
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v 56 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRV 56 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEE
Confidence 345677777777766666545666554
No 456
>KOG1769|consensus
Probab=26.90 E-value=65 Score=16.87 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=25.9
Q ss_pred eeCCCCcEEEeeCCCccchheec-cccccCCCCeEEEEEcCCCCEE
Q psy17135 49 RPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILDVAFHPSKPFI 93 (106)
Q Consensus 49 s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ 93 (106)
..+.|+.+.+|.++...+++.+- +...++.-....++|--||..|
T Consensus 25 V~gqd~~~~~Fkikr~t~LkKLM~aYc~r~Gl~~~s~RFlFdG~rI 70 (99)
T KOG1769|consen 25 VKGQDGSVVVFKIKRHTPLKKLMKAYCERQGLSMNSLRFLFDGQRI 70 (99)
T ss_pred EecCCCCEEEEEeecCChHHHHHHHHHHHcCCccceEEEEECCcCc
Confidence 33488999888888776665542 2222222445566665555433
No 457
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=26.86 E-value=97 Score=15.63 Aligned_cols=51 Identities=12% Similarity=0.046 Sum_probs=30.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD 62 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~ 62 (106)
+-+.|..||-++.+. .... -.....+...|..... .++....+.|.++...
T Consensus 34 ~~~~Vvyyd~~~~~~--va~g---~~~aNGI~~s~~~k~l--yVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 34 PWGNVVYYDGKEVKV--VASG---FSFANGIAISPDKKYL--YVASSLAHSIHVYKRH 84 (86)
T ss_pred CCceEEEEeCCEeEE--eecc---CCCCceEEEcCCCCEE--EEEeccCCeEEEEEec
Confidence 446677787654332 2221 1235566777776653 4666777888888654
No 458
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=26.35 E-value=69 Score=15.25 Aligned_cols=19 Identities=26% Similarity=0.499 Sum_probs=12.7
Q ss_pred cCCCCEEEEecCCCeEEEc
Q psy17135 87 HPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 87 ~~~~~~~~s~~~d~~i~iw 105 (106)
+|-|..++.++..|-..++
T Consensus 9 sPlG~l~l~a~e~gL~~i~ 27 (77)
T PF02870_consen 9 SPLGPLLLAASEKGLCGID 27 (77)
T ss_dssp ETTEEEEEEEETTCEEEEE
T ss_pred CCCeEEEEEEECCeEEEEE
Confidence 6677777777777765543
No 459
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=26.22 E-value=64 Score=13.27 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=17.5
Q ss_pred CCeEEEEEcCCCCEEEEecCCC
Q psy17135 79 ESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
.....+++.+++...++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3567888889999998888765
No 460
>TIGR02381 cspD cold shock domain protein CspD. This model represents what appears to be a phylogenetically distinct clade, containing E. coli CspD and related proteobacterial proteins within the larger family of cold shock domain proteins described by pfam model pfam00313. The gene symbol cspD may have been used idependently for other subfamilies of cold shock domain proteins, such as for B. subtilis CspD. These proteins typically are shorter than 70 amino acids. In E. coli, CspD is a stress response protein induced in stationary phase. This homodimer binds single-stranded DNA and appears to inhibit DNA replication.
Probab=25.52 E-value=84 Score=14.86 Aligned_cols=13 Identities=0% Similarity=-0.051 Sum_probs=8.3
Q ss_pred CCceEEEEeCccC
Q psy17135 5 PSSVIYIWTLLEL 17 (106)
Q Consensus 5 ~d~~i~iwd~~~~ 17 (106)
..|+|+.||...+
T Consensus 2 ~~G~Vk~f~~~kG 14 (68)
T TIGR02381 2 AIGIVKWFNNAKG 14 (68)
T ss_pred CCeEEEEEeCCCC
Confidence 3577777776543
No 461
>PF06200 tify: tify domain; InterPro: IPR010399 The tify domain is a 36-amino acid domain only found among Embryophyta (land plants). It has been named after the most conserved amino acid pattern (TIF[F/Y]XG) it contains, but was previously known as the Zim domain. As the use of uppercase characters (TIFY) might imply that the domain is fully conserved across proteins, a lowercase lettering has been chosen in an attempt to highlight the reality of its natural variability. Based on the domain architecture, tify domain containing proteins can be classified into two groups. Group I is formed by proteins possessing a CCT (CONSTANS, CO-like, and TOC1) domain and a GATA-type zinc finger in addition to the tify domain. Group II contains proteins characterised by the tify domain but lacking a GATA-type zinc finger. Tify domain containing proteins might be involved in developmental processes and some of them have features that are characteristic for transcription factors: a nuclear localisation and the presence of a putative DNA-binding domain []. Some proteins known to contain a tify domain include: Arabidopsis thaliana Zinc-finger protein expressed in Inflorescence Meristem (ZIM), a putative transcription factor involved in inflorescence and flower development [, ]. A. thaliana ZIM-like proteins (ZML) []. A. thaliana PEAPOD1 and PEAPOD2 (PPD1 and PPD2) [].
Probab=24.47 E-value=55 Score=13.58 Aligned_cols=13 Identities=0% Similarity=-0.138 Sum_probs=10.9
Q ss_pred EeeCCCCcEEEee
Q psy17135 48 SRPGHDCSIRLWN 60 (106)
Q Consensus 48 ~s~~~d~~v~iwd 60 (106)
+|-..+|.|.++|
T Consensus 8 LTIfY~G~V~Vfd 20 (36)
T PF06200_consen 8 LTIFYGGQVCVFD 20 (36)
T ss_pred EEEEECCEEEEeC
Confidence 5777889999998
No 462
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=24.44 E-value=1.4e+02 Score=16.46 Aligned_cols=26 Identities=4% Similarity=0.157 Sum_probs=17.9
Q ss_pred EeeCCCCcEEEeeCCCccchheeccc
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
+.....|.|++.|..+...+..++-+
T Consensus 45 Vp~~seG~V~l~D~~t~~~ias~~I~ 70 (125)
T cd01211 45 VPNNIEGTVKLIDAQSNKVIASFSIV 70 (125)
T ss_pred ecCCCCceEEEEcCCCCcEEEEEEEE
Confidence 33456788999999887766555443
No 463
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=23.84 E-value=99 Score=19.35 Aligned_cols=25 Identities=12% Similarity=0.223 Sum_probs=19.5
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
...--|+.+|..++++..++-++..
T Consensus 261 ~~g~i~~~~G~LvAs~~Qegl~r~~ 285 (286)
T PRK10526 261 VRGEFYTQDGVLVASTVQEGVMRNH 285 (286)
T ss_pred EEEEEECCCCCEEEEEEeeEEEEec
Confidence 3444578999999999998888753
No 464
>PRK14998 cold shock-like protein CspD; Provisional
Probab=23.25 E-value=99 Score=14.98 Aligned_cols=13 Identities=0% Similarity=-0.120 Sum_probs=9.3
Q ss_pred CceEEEEeCccCc
Q psy17135 6 SSVIYIWTLLELQ 18 (106)
Q Consensus 6 d~~i~iwd~~~~~ 18 (106)
.|+|+.||...|=
T Consensus 3 ~G~Vkwfn~~kGf 15 (73)
T PRK14998 3 TGTVKWFNNAKGF 15 (73)
T ss_pred CeEEEEEeCCCce
Confidence 5888888886543
No 465
>PRK09937 stationary phase/starvation inducible regulatory protein CspD; Provisional
Probab=22.96 E-value=1e+02 Score=15.03 Aligned_cols=14 Identities=0% Similarity=-0.156 Sum_probs=9.5
Q ss_pred CCceEEEEeCccCc
Q psy17135 5 PSSVIYIWTLLELQ 18 (106)
Q Consensus 5 ~d~~i~iwd~~~~~ 18 (106)
..|+|+.||...|=
T Consensus 2 ~~G~Vkwfn~~KGf 15 (74)
T PRK09937 2 EKGTVKWFNNAKGF 15 (74)
T ss_pred CCeEEEEEeCCCCe
Confidence 35788888876543
No 466
>KOG2467|consensus
Probab=22.41 E-value=89 Score=20.92 Aligned_cols=17 Identities=24% Similarity=0.186 Sum_probs=15.8
Q ss_pred EEeeCCCCcEEEeeCCC
Q psy17135 47 DSRPGHDCSIRLWNLDN 63 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~ 63 (106)
++|++.|..+-+||++.
T Consensus 344 lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 344 LVTGGTDNHLVLVDLRP 360 (477)
T ss_pred EecCCccceEEEEeccc
Confidence 79999999999999985
No 467
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=22.20 E-value=1.2e+02 Score=15.18 Aligned_cols=23 Identities=13% Similarity=0.368 Sum_probs=17.8
Q ss_pred CCeEEEEEcCCCCEEEEecCCCe
Q psy17135 79 ESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
..|.++.|.|-...+..|...|.
T Consensus 10 ~~v~~~~F~PfEDvLgvGh~~G~ 32 (80)
T PF08149_consen 10 SPVESLRFCPFEDVLGVGHSKGF 32 (80)
T ss_pred CeeeeeEEechHHeeEeeccCce
Confidence 67888999987777777776664
No 468
>cd03473 Rieske_CMP_Neu5Ac_hydrolase_N Cytidine monophosphate-N-acetylneuraminic acid (CMP Neu5Ac) hydroxylase family, N-terminal Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. CMP Neu5Ac hydroxylase is the key enzyme for the synthesis of N-glycolylneuraminic acid (NeuGc) from N-acetylneuraminic acid (Neu5Ac), NeuGc and Neu5Ac are members of a family of cell surface sugars called sialic acids. All mammals except humans have both NeuGc variants on their cell surfaces. In humans, the gene encoding CMP Neu5Ac hydroxylase has a mutation within its coding region that abolishes NeuGc production.
Probab=21.99 E-value=1.3e+02 Score=15.98 Aligned_cols=11 Identities=9% Similarity=0.138 Sum_probs=8.0
Q ss_pred EeeCCCccchh
Q psy17135 58 LWNLDNKTCVQ 68 (106)
Q Consensus 58 iwd~~~~~~~~ 68 (106)
-||+++|+++.
T Consensus 76 ~FDLrTG~~~~ 86 (107)
T cd03473 76 KLDVSTMKYVN 86 (107)
T ss_pred EEEcCCCCCcc
Confidence 37888888664
No 469
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. EPS8 is a regulator of Rac signaling. It consists of a PTB and an SH3 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=21.98 E-value=1.5e+02 Score=16.36 Aligned_cols=24 Identities=4% Similarity=-0.033 Sum_probs=19.6
Q ss_pred cCCCceEEEEeCccCceeeecccC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCP 26 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~ 26 (106)
+++++.|++-|..+++.+..+...
T Consensus 47 qv~~~~v~LlD~etk~elE~fpl~ 70 (127)
T cd01210 47 RVRYQWVTLLDYETKEELESYPLS 70 (127)
T ss_pred EEcCCeEEEEcCCCcChhhcCCHh
Confidence 467889999999999887777763
No 470
>PF01394 Clathrin_propel: Clathrin propeller repeat; InterPro: IPR022365 This entry represents the propeller repeat found in clathrin heavy chains. The N terminus of the heavy chain is known as the globular domain, and is composed of seven repeats which form a beta propeller []. Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. Clathrin is a trimer composed of three heavy chains and three light chains, each monomer projecting outwards like a leg; this three-legged structure is known as a triskelion [, ]. The heavy chains form the legs, their N-terminal beta-propeller regions extending outwards, while their C-terminal alpha-alpha-superhelical regions form the central hub of the triskelion. Peptide motifs can bind between the beta-propeller blades. The light chains appear to have a regulatory role, and may help orient the assembly and disassembly of clathrin coats as they interact with hsc70 uncoating ATPase []. Clathrin triskelia self-polymerise into a curved lattice by twisting individual legs together. The clathrin lattice forms around a vesicle as it buds from the TGN, plasma membrane or endosomes, acting to stabilise the vesicle and facilitate the budding process []. The multiple blades created when the triskelia polymerise are involved in multiple protein interactions, enabling the recruitment of different cargo adaptors and membrane attachment proteins []. More information about these proteins can be found at Protein of the Month: Clathrin [].; PDB: 1UTC_B 3GD1_I 3GC3_B 1BPO_C 1C9I_B 1C9L_A 2XZG_A 2XZH_A.
Probab=21.41 E-value=83 Score=12.89 Aligned_cols=10 Identities=0% Similarity=0.295 Sum_probs=7.4
Q ss_pred CCceEEEEeC
Q psy17135 5 PSSVIYIWTL 14 (106)
Q Consensus 5 ~d~~i~iwd~ 14 (106)
..|.+.+||+
T Consensus 27 ~~G~v~l~sv 36 (37)
T PF01394_consen 27 VKGQVQLYSV 36 (37)
T ss_dssp TEEEEEEEET
T ss_pred eeeEEEEEEC
Confidence 4577888876
No 471
>KOG3535|consensus
Probab=21.26 E-value=2.8e+02 Score=18.99 Aligned_cols=26 Identities=8% Similarity=0.106 Sum_probs=17.9
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccc
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
.+.-+.+| |+|+|-++|...+.+..+
T Consensus 95 ~l~Is~~G-IKI~DEKtGav~H~hpV~ 120 (557)
T KOG3535|consen 95 TLQISIDG-IKILDEKTGAVLHNHPVS 120 (557)
T ss_pred EEEEeecc-eEEeeccccceeccCccc
Confidence 35666665 899999988766554444
No 472
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=20.69 E-value=2.5e+02 Score=20.47 Aligned_cols=28 Identities=11% Similarity=0.319 Sum_probs=25.1
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+-.+.|..++..++....+|.|.+||
T Consensus 130 ~kvv~Ik~~~~~~~I~vvl~nG~i~~~d 157 (670)
T PF10395_consen 130 DKVVGIKFSSDGKIIYVVLENGSIQIYD 157 (670)
T ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEe
Confidence 6788899999999999999999999886
No 473
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=20.24 E-value=74 Score=16.39 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=15.6
Q ss_pred CeEEEEEcCCCCEEEEecCCC
Q psy17135 80 SILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~ 100 (106)
....--|+++|..++++..++
T Consensus 82 ~~~~~l~~~~G~LvAs~~Q~~ 102 (104)
T cd03444 82 LVEGRIFTRDGELVASVAQEG 102 (104)
T ss_pred EEEEEEECCCCCEEEEEEEee
Confidence 344556889999999987654
No 474
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=20.09 E-value=86 Score=16.22 Aligned_cols=19 Identities=5% Similarity=0.317 Sum_probs=13.7
Q ss_pred cEEEeeCCCccchheeccc
Q psy17135 55 SIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 55 ~v~iwd~~~~~~~~~~~~~ 73 (106)
.|++.|..++..++.++..
T Consensus 69 vVkViD~~T~eVIRqIP~E 87 (107)
T PF03646_consen 69 VVKVIDKETGEVIRQIPPE 87 (107)
T ss_dssp EEEEEETTT-SEEEEE-HH
T ss_pred EEEEEECCCCcEEEeCCcH
Confidence 4788999999988888643
Done!