Query psy17135
Match_columns 106
No_of_seqs 133 out of 1325
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 22:47:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.9 4.6E-21 1.6E-25 116.6 9.5 98 3-106 188-286 (344)
2 2w18_A PALB2, fancn, partner a 99.8 2.3E-20 8E-25 113.2 9.9 56 47-106 298-354 (356)
3 3ow8_A WD repeat-containing pr 99.8 2.3E-20 7.8E-25 112.4 9.4 95 3-106 224-318 (321)
4 2ynn_A Coatomer subunit beta'; 99.8 1.6E-20 5.4E-25 112.2 8.6 95 3-106 31-125 (304)
5 1got_B GT-beta; complex (GTP-b 99.8 2.5E-20 8.5E-25 112.8 9.4 97 3-106 244-340 (340)
6 4gqb_B Methylosome protein 50; 99.8 1.6E-20 5.4E-25 114.2 8.2 97 3-106 99-198 (344)
7 3ow8_A WD repeat-containing pr 99.8 7.8E-20 2.7E-24 110.1 10.8 94 4-106 183-276 (321)
8 1vyh_C Platelet-activating fac 99.8 3.7E-20 1.3E-24 114.5 9.6 95 3-106 314-408 (410)
9 4gga_A P55CDC, cell division c 99.8 8.8E-20 3E-24 112.9 11.0 95 4-106 298-392 (420)
10 1got_B GT-beta; complex (GTP-b 99.8 3.4E-20 1.1E-24 112.2 8.7 95 3-106 160-254 (340)
11 2pbi_B Guanine nucleotide-bind 99.8 1E-19 3.5E-24 110.7 10.0 97 3-106 258-354 (354)
12 2ynn_A Coatomer subunit beta'; 99.8 7.6E-20 2.6E-24 109.2 8.1 95 3-106 73-169 (304)
13 1vyh_C Platelet-activating fac 99.8 6.3E-20 2.2E-24 113.5 7.7 95 3-106 126-220 (410)
14 4g56_B MGC81050 protein; prote 99.8 1.6E-19 5.3E-24 110.1 9.3 94 4-106 246-340 (357)
15 2xzm_R RACK1; ribosome, transl 99.8 1.4E-19 5E-24 109.5 9.0 97 3-106 45-146 (343)
16 2pbi_B Guanine nucleotide-bind 99.8 2.2E-19 7.6E-24 109.3 9.6 97 3-106 172-268 (354)
17 4g56_B MGC81050 protein; prote 99.8 3E-19 1E-23 108.9 10.1 98 3-106 200-298 (357)
18 3vu4_A KMHSV2; beta-propeller 99.8 3.1E-19 1.1E-23 108.7 9.5 95 3-106 155-268 (355)
19 4h5i_A Guanine nucleotide-exch 99.8 2.8E-19 9.6E-24 109.3 9.2 92 8-106 246-340 (365)
20 4ggc_A P55CDC, cell division c 99.8 8.9E-19 3.1E-23 104.2 11.0 95 4-106 218-312 (318)
21 3iz6_a 40S ribosomal protein R 99.8 4.2E-19 1.4E-23 108.8 9.8 98 3-106 176-277 (380)
22 3iz6_a 40S ribosomal protein R 99.8 8.9E-19 3E-23 107.4 10.9 98 2-106 266-372 (380)
23 3frx_A Guanine nucleotide-bind 99.8 3.2E-19 1.1E-23 107.2 7.7 96 2-106 35-135 (319)
24 2j04_B YDR362CP, TAU91; beta p 99.8 1.6E-19 5.6E-24 115.0 6.7 97 3-106 329-425 (524)
25 1nr0_A Actin interacting prote 99.8 6.7E-19 2.3E-23 113.5 8.6 95 3-106 166-267 (611)
26 3fm0_A Protein CIAO1; WDR39,SG 99.8 8.2E-19 2.8E-23 106.4 8.5 97 3-106 34-133 (345)
27 2hes_X YDR267CP; beta-propelle 99.8 1.6E-18 5.6E-23 104.5 9.7 97 3-106 30-135 (330)
28 4ggc_A P55CDC, cell division c 99.8 4.4E-18 1.5E-22 101.2 10.7 99 5-106 43-178 (318)
29 3lrv_A PRE-mRNA-splicing facto 99.8 4.3E-18 1.5E-22 103.0 10.8 95 3-106 145-241 (343)
30 2ymu_A WD-40 repeat protein; u 99.8 2.8E-18 9.5E-23 109.2 10.1 92 4-106 486-577 (577)
31 4ery_A WD repeat-containing pr 99.8 2E-18 6.8E-23 103.0 8.8 95 3-106 83-177 (312)
32 4ery_A WD repeat-containing pr 99.8 1.9E-18 6.7E-23 103.0 8.7 95 3-106 41-135 (312)
33 3vl1_A 26S proteasome regulato 99.8 3.2E-18 1.1E-22 105.3 9.7 94 4-106 116-209 (420)
34 3bg1_A Protein SEC13 homolog; 99.8 1.4E-18 4.9E-23 104.2 7.8 97 3-106 31-133 (316)
35 4gq1_A NUP37; propeller, trans 99.8 1.5E-18 5.2E-23 106.8 6.8 99 4-106 108-215 (393)
36 3dm0_A Maltose-binding peripla 99.8 3.8E-18 1.3E-22 111.2 8.7 98 2-106 400-500 (694)
37 2pm7_B Protein transport prote 99.8 4.8E-18 1.7E-22 101.1 8.3 99 4-106 120-235 (297)
38 2hes_X YDR267CP; beta-propelle 99.7 8.4E-18 2.9E-22 101.4 8.7 95 3-106 76-181 (330)
39 2pm7_B Protein transport prote 99.7 9.1E-18 3.1E-22 99.9 8.7 95 3-106 27-129 (297)
40 1erj_A Transcriptional repress 99.7 1.2E-17 4.2E-22 102.7 9.4 94 3-106 183-284 (393)
41 1nr0_A Actin interacting prote 99.7 1.4E-17 4.6E-22 107.4 9.8 101 3-106 208-352 (611)
42 3fm0_A Protein CIAO1; WDR39,SG 99.7 9.3E-18 3.2E-22 101.8 8.3 97 3-106 79-178 (345)
43 3frx_A Guanine nucleotide-bind 99.7 1.5E-17 5E-22 100.0 8.9 97 3-106 125-224 (319)
44 3k26_A Polycomb protein EED; W 99.7 2.4E-17 8.3E-22 99.4 9.6 95 3-106 91-189 (366)
45 2aq5_A Coronin-1A; WD40 repeat 99.7 1.3E-17 4.5E-22 102.5 8.5 96 3-106 100-204 (402)
46 4e54_B DNA damage-binding prot 99.7 5.2E-17 1.8E-21 101.0 10.8 99 4-106 139-237 (435)
47 4gga_A P55CDC, cell division c 99.7 4.7E-17 1.6E-21 100.8 10.3 92 6-106 124-215 (420)
48 3bg1_A Protein SEC13 homolog; 99.7 2.3E-17 7.9E-22 99.0 8.5 100 3-106 185-290 (316)
49 2oaj_A Protein SNI1; WD40 repe 99.7 8.5E-18 2.9E-22 112.5 7.3 96 3-106 453-602 (902)
50 1erj_A Transcriptional repress 99.7 5.1E-17 1.8E-21 100.0 10.1 95 5-106 83-193 (393)
51 2xzm_R RACK1; ribosome, transl 99.7 4.7E-17 1.6E-21 98.5 9.4 99 3-106 136-241 (343)
52 3dwl_C Actin-related protein 2 99.7 1.8E-17 6.2E-22 100.8 7.2 97 3-106 29-128 (377)
53 3k26_A Polycomb protein EED; W 99.7 9.5E-17 3.2E-21 96.8 10.1 97 3-106 247-363 (366)
54 4e54_B DNA damage-binding prot 99.7 1.1E-16 3.8E-21 99.5 9.9 97 2-106 182-279 (435)
55 4aow_A Guanine nucleotide-bind 99.7 5.9E-17 2E-21 97.1 8.3 97 3-106 233-334 (340)
56 1sq9_A Antiviral protein SKI8; 99.7 1.4E-16 4.7E-21 97.3 10.0 93 7-106 258-392 (397)
57 3gre_A Serine/threonine-protei 99.7 1.8E-17 6.2E-22 102.6 6.1 96 4-106 189-289 (437)
58 3dwl_C Actin-related protein 2 99.7 2E-17 7E-22 100.6 6.2 97 3-106 73-174 (377)
59 1pgu_A Actin interacting prote 99.7 8.1E-17 2.8E-21 102.8 8.9 94 4-106 507-611 (615)
60 2oit_A Nucleoporin 214KDA; NH2 99.7 3E-17 1E-21 102.6 6.5 98 3-106 114-220 (434)
61 2aq5_A Coronin-1A; WD40 repeat 99.7 1.9E-16 6.5E-21 97.4 10.0 97 3-106 53-160 (402)
62 2pm9_A Protein WEB1, protein t 99.7 9.9E-17 3.4E-21 98.4 8.6 96 4-106 42-142 (416)
63 3v7d_B Cell division control p 99.7 1.1E-16 3.6E-21 99.8 8.5 94 3-106 138-233 (464)
64 3odt_A Protein DOA1; ubiquitin 99.7 2E-16 6.9E-21 93.7 9.3 93 3-106 201-293 (313)
65 1gxr_A ESG1, transducin-like e 99.7 2.6E-16 8.8E-21 94.0 9.8 96 4-106 116-211 (337)
66 3mkq_A Coatomer beta'-subunit; 99.7 2.2E-16 7.4E-21 103.8 9.9 94 4-106 32-125 (814)
67 2ymu_A WD-40 repeat protein; u 99.7 2E-16 6.8E-21 100.7 9.3 93 3-106 34-126 (577)
68 3mmy_A MRNA export factor; mRN 99.7 2E-16 6.7E-21 95.4 8.8 95 3-106 60-157 (368)
69 3f3f_A Nucleoporin SEH1; struc 99.7 1.3E-16 4.6E-21 95.2 8.1 97 3-106 29-140 (351)
70 3dm0_A Maltose-binding peripla 99.7 2.7E-16 9.1E-21 102.5 9.8 99 3-106 490-589 (694)
71 3ei3_B DNA damage-binding prot 99.7 6.4E-16 2.2E-20 94.3 10.8 95 3-106 137-233 (383)
72 3lrv_A PRE-mRNA-splicing facto 99.7 3.5E-16 1.2E-20 94.6 9.3 97 3-106 91-198 (343)
73 1sq9_A Antiviral protein SKI8; 99.7 1.4E-16 4.8E-21 97.3 7.6 97 3-106 203-319 (397)
74 2j04_B YDR362CP, TAU91; beta p 99.7 2E-16 7E-21 100.9 8.5 96 3-106 231-339 (524)
75 1pgu_A Actin interacting prote 99.7 3.3E-16 1.1E-20 100.0 9.3 93 6-106 466-569 (615)
76 3jrp_A Fusion protein of prote 99.7 2.7E-16 9.1E-21 95.2 8.3 94 4-106 30-131 (379)
77 3dw8_B Serine/threonine-protei 99.7 7.4E-16 2.5E-20 95.4 9.8 98 5-106 196-312 (447)
78 2pm9_A Protein WEB1, protein t 99.7 2.5E-16 8.6E-21 96.6 7.5 91 8-106 241-334 (416)
79 3f3f_A Nucleoporin SEH1; struc 99.7 4.8E-16 1.6E-20 92.8 8.3 99 4-106 189-334 (351)
80 4aow_A Guanine nucleotide-bind 99.7 1.8E-15 6E-20 90.6 10.7 97 4-106 147-243 (340)
81 3jrp_A Fusion protein of prote 99.7 5.1E-16 1.8E-20 94.0 8.3 96 4-106 122-237 (379)
82 3v7d_B Cell division control p 99.7 9.8E-16 3.4E-20 95.5 9.6 92 4-106 287-378 (464)
83 2j04_A TAU60, YPL007P, hypothe 99.7 1.5E-15 5.1E-20 97.3 10.5 95 4-106 104-208 (588)
84 3zwl_B Eukaryotic translation 99.7 1.8E-15 6.1E-20 91.2 10.3 93 4-106 237-343 (369)
85 3vl1_A 26S proteasome regulato 99.7 4.2E-16 1.4E-20 95.9 7.7 92 4-106 75-167 (420)
86 2xyi_A Probable histone-bindin 99.7 9.1E-16 3.1E-20 95.4 9.2 96 3-106 250-350 (430)
87 3i2n_A WD repeat-containing pr 99.7 5.3E-16 1.8E-20 93.3 7.9 94 5-106 42-145 (357)
88 1r5m_A SIR4-interacting protei 99.7 3.3E-16 1.1E-20 96.0 7.0 95 3-106 306-422 (425)
89 3ei3_B DNA damage-binding prot 99.6 1E-15 3.5E-20 93.4 8.9 93 4-106 182-279 (383)
90 3sfz_A APAF-1, apoptotic pepti 99.6 1.2E-15 4E-20 104.2 9.7 97 3-106 675-771 (1249)
91 4a11_B DNA excision repair pro 99.6 2E-15 6.8E-20 92.2 9.9 97 3-106 118-215 (408)
92 1r5m_A SIR4-interacting protei 99.6 1.3E-15 4.6E-20 93.3 9.1 93 4-106 266-358 (425)
93 1yfq_A Cell cycle arrest prote 99.6 1.6E-15 5.5E-20 91.0 9.2 100 4-106 167-279 (342)
94 3zwl_B Eukaryotic translation 99.6 2.2E-15 7.4E-20 90.8 9.7 93 4-106 51-148 (369)
95 3i2n_A WD repeat-containing pr 99.6 8.4E-16 2.9E-20 92.5 7.9 93 4-106 187-288 (357)
96 2oaj_A Protein SNI1; WD40 repe 99.6 2E-15 6.8E-20 101.2 10.2 100 4-106 117-239 (902)
97 1k8k_C P40, ARP2/3 complex 41 99.6 1.4E-15 4.7E-20 92.1 8.6 97 3-106 70-170 (372)
98 3sfz_A APAF-1, apoptotic pepti 99.6 1.2E-15 4E-20 104.2 9.1 95 3-106 633-729 (1249)
99 2vdu_B TRNA (guanine-N(7)-)-me 99.6 6.4E-16 2.2E-20 96.4 7.2 97 3-106 121-226 (450)
100 4a11_B DNA excision repair pro 99.6 4E-15 1.4E-19 90.8 10.0 95 4-106 163-273 (408)
101 4aez_A CDC20, WD repeat-contai 99.6 2.3E-15 7.8E-20 92.7 8.9 92 5-106 282-377 (401)
102 1k8k_C P40, ARP2/3 complex 41 99.6 2.1E-15 7.3E-20 91.2 8.7 94 4-106 27-124 (372)
103 3jro_A Fusion protein of prote 99.6 1.3E-15 4.4E-20 100.4 8.2 97 3-106 27-129 (753)
104 3dw8_B Serine/threonine-protei 99.6 1.7E-15 5.9E-20 93.7 8.2 71 28-106 176-255 (447)
105 4gq1_A NUP37; propeller, trans 99.6 8.5E-16 2.9E-20 94.6 6.5 100 3-106 162-283 (393)
106 1gxr_A ESG1, transducin-like e 99.6 4.4E-15 1.5E-19 88.6 9.5 94 6-106 71-169 (337)
107 3gre_A Serine/threonine-protei 99.6 2.6E-15 8.8E-20 93.0 8.5 100 3-106 279-437 (437)
108 4aez_A CDC20, WD repeat-contai 99.6 5.5E-15 1.9E-19 91.0 9.8 93 4-106 110-202 (401)
109 2w18_A PALB2, fancn, partner a 99.6 4.4E-15 1.5E-19 90.3 8.7 99 5-106 155-266 (356)
110 2j04_A TAU60, YPL007P, hypothe 99.6 8.6E-16 2.9E-20 98.4 5.6 96 4-106 61-157 (588)
111 3jro_A Fusion protein of prote 99.6 1.7E-15 5.9E-20 99.8 7.0 97 3-106 119-235 (753)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.6 6.3E-15 2.1E-19 91.9 8.6 95 4-106 168-268 (450)
113 3mmy_A MRNA export factor; mRN 99.6 1.3E-15 4.5E-20 91.8 5.2 94 3-103 234-340 (368)
114 2xyi_A Probable histone-bindin 99.6 1.7E-14 5.9E-19 89.6 9.9 96 3-106 147-260 (430)
115 3mkq_A Coatomer beta'-subunit; 99.6 2E-14 6.9E-19 94.5 10.5 96 3-106 159-256 (814)
116 1yfq_A Cell cycle arrest prote 99.6 2.6E-14 9E-19 85.7 10.2 93 3-106 29-128 (342)
117 1p22_A F-BOX/WD-repeat protein 99.6 1.3E-14 4.3E-19 90.2 8.9 91 3-106 149-239 (435)
118 2ovr_B FBW7, F-BOX/WD repeat p 99.6 2E-14 6.7E-19 89.4 9.5 95 3-106 335-439 (445)
119 1p22_A F-BOX/WD-repeat protein 99.6 1.5E-14 5E-19 89.9 8.6 91 3-106 272-362 (435)
120 3vu4_A KMHSV2; beta-propeller 99.6 2.4E-14 8.3E-19 87.2 9.3 53 50-106 155-224 (355)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.6 3.2E-14 1.1E-18 88.5 9.0 91 3-106 135-225 (445)
122 4h5i_A Guanine nucleotide-exch 99.5 2.4E-14 8E-19 87.6 8.0 71 29-106 219-297 (365)
123 3odt_A Protein DOA1; ubiquitin 99.5 6.6E-14 2.3E-18 82.9 8.8 93 3-106 35-130 (313)
124 1l0q_A Surface layer protein; 99.5 2E-13 6.7E-18 83.4 8.9 94 3-106 8-102 (391)
125 1l0q_A Surface layer protein; 99.4 1.2E-12 4.2E-17 79.9 10.0 93 4-106 51-144 (391)
126 3bws_A Protein LP49; two-domai 99.4 6.8E-13 2.3E-17 82.0 8.5 97 3-106 140-240 (433)
127 3bws_A Protein LP49; two-domai 99.4 7.9E-12 2.7E-16 77.2 10.0 92 4-106 322-429 (433)
128 1nir_A Nitrite reductase; hemo 99.3 3E-11 1E-15 77.5 8.9 92 4-106 156-254 (543)
129 2oit_A Nucleoporin 214KDA; NH2 99.2 1.7E-11 5.8E-16 76.7 6.2 87 3-95 168-257 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.2 8.1E-11 2.8E-15 73.1 8.6 89 7-106 159-253 (415)
131 2ojh_A Uncharacterized protein 99.2 1.7E-10 5.7E-15 67.5 7.2 92 4-105 19-113 (297)
132 2hqs_A Protein TOLB; TOLB, PAL 99.1 9.2E-10 3.2E-14 68.4 10.8 90 7-106 203-297 (415)
133 1jmx_B Amine dehydrogenase; ox 99.1 2.5E-10 8.5E-15 68.5 7.6 101 3-106 17-131 (349)
134 1pby_B Quinohemoprotein amine 99.1 1.1E-09 3.7E-14 65.3 8.5 101 4-106 8-121 (337)
135 3u4y_A Uncharacterized protein 99.1 6.3E-10 2.2E-14 66.5 7.4 95 3-106 16-114 (331)
136 2ecf_A Dipeptidyl peptidase IV 99.1 1.3E-09 4.3E-14 71.6 9.2 90 8-106 65-178 (741)
137 3vgz_A Uncharacterized protein 99.0 6.8E-09 2.3E-13 62.4 11.3 97 5-106 162-259 (353)
138 1xfd_A DIP, dipeptidyl aminope 99.0 4.4E-10 1.5E-14 73.5 6.3 95 4-106 34-140 (723)
139 1pby_B Quinohemoprotein amine 99.0 1.3E-09 4.4E-14 65.0 7.9 88 8-106 220-307 (337)
140 1nir_A Nitrite reductase; hemo 99.0 3.4E-09 1.1E-13 68.1 9.9 94 4-106 390-511 (543)
141 3vgz_A Uncharacterized protein 99.0 8.2E-09 2.8E-13 62.0 10.7 96 6-106 68-170 (353)
142 1ri6_A Putative isomerase YBHE 99.0 2.2E-09 7.5E-14 64.1 8.1 94 4-106 12-112 (343)
143 1xfd_A DIP, dipeptidyl aminope 99.0 3.1E-09 1.1E-13 69.5 9.3 90 5-99 89-193 (723)
144 3o4h_A Acylamino-acid-releasin 99.0 3.3E-09 1.1E-13 68.1 8.7 88 6-106 131-224 (582)
145 1k32_A Tricorn protease; prote 99.0 2E-09 6.8E-14 73.4 7.9 91 6-106 357-458 (1045)
146 1ri6_A Putative isomerase YBHE 99.0 1.7E-09 5.9E-14 64.6 6.6 93 6-106 59-157 (343)
147 1z68_A Fibroblast activation p 99.0 8.7E-10 3E-14 72.2 5.4 93 5-106 34-136 (719)
148 3hfq_A Uncharacterized protein 99.0 7.9E-09 2.7E-13 62.3 8.9 99 5-106 61-168 (347)
149 1k32_A Tricorn protease; prote 98.9 4.4E-09 1.5E-13 71.7 8.3 92 4-105 397-498 (1045)
150 3u4y_A Uncharacterized protein 98.9 2E-08 7E-13 60.0 10.2 92 4-106 59-157 (331)
151 3o4h_A Acylamino-acid-releasin 98.9 6.5E-10 2.2E-14 71.4 3.8 89 7-106 175-273 (582)
152 4a5s_A Dipeptidyl peptidase 4 98.9 9.8E-09 3.4E-13 67.8 9.0 92 6-106 35-138 (740)
153 2z3z_A Dipeptidyl aminopeptida 98.9 4E-09 1.4E-13 69.0 7.0 86 5-97 99-199 (706)
154 2ojh_A Uncharacterized protein 98.9 3.5E-08 1.2E-12 57.6 9.1 92 5-106 60-157 (297)
155 1z68_A Fibroblast activation p 98.9 1.3E-08 4.4E-13 66.8 7.8 84 5-99 88-189 (719)
156 3fvz_A Peptidyl-glycine alpha- 98.8 4.7E-08 1.6E-12 58.9 9.5 96 4-106 215-319 (329)
157 2z3z_A Dipeptidyl aminopeptida 98.8 8.3E-09 2.9E-13 67.5 6.4 99 5-106 233-339 (706)
158 1xip_A Nucleoporin NUP159; bet 98.8 1.3E-08 4.4E-13 63.1 6.5 85 5-106 104-188 (388)
159 1jmx_B Amine dehydrogenase; ox 98.7 4.5E-08 1.5E-12 58.7 7.2 93 4-106 62-172 (349)
160 2ecf_A Dipeptidyl peptidase IV 98.7 3.9E-08 1.3E-12 64.6 7.4 87 7-100 129-230 (741)
161 3hfq_A Uncharacterized protein 98.7 7.8E-08 2.7E-12 58.0 8.2 96 4-105 206-313 (347)
162 3scy_A Hypothetical bacterial 98.7 1.7E-07 5.8E-12 56.8 8.8 94 5-105 231-333 (361)
163 3scy_A Hypothetical bacterial 98.7 1.9E-07 6.4E-12 56.6 9.0 99 4-106 174-288 (361)
164 2oiz_A Aromatic amine dehydrog 98.7 3.2E-08 1.1E-12 60.6 4.8 96 4-106 28-137 (361)
165 1q7f_A NHL, brain tumor CG1071 98.6 8.7E-07 3E-11 52.1 9.8 94 5-106 183-277 (286)
166 1qks_A Cytochrome CD1 nitrite 98.6 5.6E-07 1.9E-11 58.3 8.9 92 4-106 174-272 (567)
167 2bkl_A Prolyl endopeptidase; m 98.6 7.8E-07 2.7E-11 58.5 9.5 86 6-100 146-248 (695)
168 2oiz_A Aromatic amine dehydrog 98.6 1.1E-06 3.8E-11 53.8 9.5 74 6-91 285-360 (361)
169 1jof_A Carboxy-CIS,CIS-muconat 98.6 1.2E-06 4.2E-11 53.4 9.7 96 5-106 117-221 (365)
170 3no2_A Uncharacterized protein 98.5 3.6E-06 1.2E-10 49.8 10.4 92 4-105 12-104 (276)
171 3fvz_A Peptidyl-glycine alpha- 98.5 6E-06 2E-10 49.8 11.4 98 5-106 67-172 (329)
172 1jof_A Carboxy-CIS,CIS-muconat 98.5 8.2E-07 2.8E-11 54.2 7.1 93 8-106 61-173 (365)
173 3azo_A Aminopeptidase; POP fam 98.5 1.3E-06 4.6E-11 56.8 8.4 90 7-105 161-270 (662)
174 2xdw_A Prolyl endopeptidase; a 98.4 2.2E-06 7.6E-11 56.5 8.7 89 8-106 152-265 (710)
175 1q7f_A NHL, brain tumor CG1071 98.4 9.1E-06 3.1E-10 47.7 10.3 95 5-106 140-235 (286)
176 3pe7_A Oligogalacturonate lyas 98.4 9.5E-07 3.2E-11 53.8 5.6 94 6-106 9-108 (388)
177 4a5s_A Dipeptidyl peptidase 4 98.3 1.6E-06 5.4E-11 57.5 6.8 82 7-99 92-191 (740)
178 3dsm_A Uncharacterized protein 98.2 1.7E-05 5.7E-10 47.9 9.3 91 5-106 150-250 (328)
179 1rwi_B Serine/threonine-protei 98.2 3.9E-05 1.3E-09 44.5 10.4 92 6-106 170-261 (270)
180 2dg1_A DRP35, lactonase; beta 98.2 2E-05 7E-10 47.1 8.6 69 31-106 46-118 (333)
181 2gop_A Trilobed protease; beta 98.1 1.3E-05 4.4E-10 48.2 7.0 77 6-98 42-123 (347)
182 3pe7_A Oligogalacturonate lyas 98.1 2.5E-05 8.4E-10 47.6 8.2 79 8-95 61-141 (388)
183 1mda_H Methylamine dehydrogena 98.1 1.4E-05 4.9E-10 49.3 7.0 92 8-106 47-155 (368)
184 3dsm_A Uncharacterized protein 98.1 0.00016 5.4E-09 43.6 11.0 91 6-106 202-299 (328)
185 2mad_H Methylamine dehydrogena 98.1 8.9E-05 3E-09 45.8 9.9 92 8-106 48-154 (373)
186 3azo_A Aminopeptidase; POP fam 98.1 1.3E-05 4.5E-10 52.2 6.4 94 7-105 217-319 (662)
187 1xip_A Nucleoporin NUP159; bet 98.0 2.3E-05 7.8E-10 48.8 6.8 77 4-95 143-230 (388)
188 1pjx_A Dfpase, DIISOPROPYLFLUO 98.0 7.5E-05 2.6E-09 44.1 8.8 95 5-106 196-296 (314)
189 1rwi_B Serine/threonine-protei 98.0 0.00021 7.2E-09 41.4 10.4 92 6-106 128-219 (270)
190 1yr2_A Prolyl oligopeptidase; 98.0 3.8E-05 1.3E-09 51.0 7.9 93 7-106 189-300 (741)
191 3sjl_D Methylamine dehydrogena 98.0 2.5E-05 8.6E-10 48.6 6.6 94 6-106 58-166 (386)
192 3c5m_A Oligogalacturonate lyas 98.0 4.2E-05 1.4E-09 46.5 7.1 96 4-106 165-270 (396)
193 2dg1_A DRP35, lactonase; beta 98.0 0.00023 7.7E-09 42.6 10.1 87 5-98 64-154 (333)
194 3c5m_A Oligogalacturonate lyas 97.9 4.6E-05 1.6E-09 46.3 7.0 93 8-106 11-108 (396)
195 3e5z_A Putative gluconolactona 97.9 0.00027 9.2E-09 41.7 10.0 86 5-103 191-281 (296)
196 3e5z_A Putative gluconolactona 97.9 9.8E-05 3.3E-09 43.6 7.7 67 32-106 30-96 (296)
197 2bkl_A Prolyl endopeptidase; m 97.9 4.8E-05 1.7E-09 50.2 6.9 66 32-101 123-190 (695)
198 1qks_A Cytochrome CD1 nitrite 97.8 9.5E-05 3.2E-09 48.1 7.5 57 45-106 168-224 (567)
199 1yiq_A Quinohemoprotein alcoho 97.8 9.4E-05 3.2E-09 49.1 7.3 79 6-93 454-532 (689)
200 3no2_A Uncharacterized protein 97.8 0.0004 1.4E-08 41.1 9.4 91 6-106 98-192 (276)
201 2hz6_A Endoplasmic reticulum t 97.8 2.8E-06 9.7E-11 52.2 0.0 60 4-70 16-75 (369)
202 2xdw_A Prolyl endopeptidase; a 97.7 7.2E-05 2.5E-09 49.5 5.9 65 32-101 127-193 (710)
203 3c75_H MADH, methylamine dehyd 97.7 9.5E-05 3.2E-09 46.6 5.8 93 7-106 99-206 (426)
204 2qe8_A Uncharacterized protein 97.7 0.002 6.7E-08 39.1 11.2 93 6-100 92-216 (343)
205 2z2n_A Virginiamycin B lyase; 97.7 0.0021 7.3E-08 37.4 10.8 90 6-106 35-126 (299)
206 2hz6_A Endoplasmic reticulum t 97.5 4.1E-05 1.4E-09 47.0 2.1 88 4-106 99-189 (369)
207 2iwa_A Glutamine cyclotransfer 97.4 0.0051 1.8E-07 36.5 9.9 90 5-106 42-132 (266)
208 3mbr_X Glutamine cyclotransfer 97.4 0.0063 2.2E-07 35.6 10.0 89 6-106 42-130 (243)
209 1kb0_A Quinohemoprotein alcoho 97.4 0.00099 3.4E-08 44.2 7.4 80 6-94 456-535 (677)
210 3sjl_D Methylamine dehydrogena 97.4 0.0016 5.6E-08 40.6 7.9 64 6-72 108-178 (386)
211 2gop_A Trilobed protease; beta 97.3 0.00084 2.9E-08 40.2 6.4 83 6-105 243-327 (347)
212 3iuj_A Prolyl endopeptidase; h 97.3 0.0019 6.4E-08 42.9 8.3 88 7-105 155-264 (693)
213 3nok_A Glutaminyl cyclase; bet 97.3 0.0039 1.3E-07 37.0 8.8 89 5-106 73-161 (268)
214 2z2n_A Virginiamycin B lyase; 97.3 0.0076 2.6E-07 35.1 10.8 91 6-106 77-168 (299)
215 2qc5_A Streptogramin B lactona 97.3 0.0088 3E-07 34.8 10.8 93 5-106 39-131 (300)
216 3nol_A Glutamine cyclotransfer 97.2 0.0053 1.8E-07 36.4 8.7 89 6-106 64-152 (262)
217 3hrp_A Uncharacterized protein 97.2 0.0028 9.6E-08 39.6 8.0 90 5-106 150-246 (409)
218 2mad_H Methylamine dehydrogena 97.2 0.007 2.4E-07 37.4 9.2 49 53-106 297-347 (373)
219 2ece_A 462AA long hypothetical 97.2 0.015 5.1E-07 37.2 10.7 95 6-105 163-285 (462)
220 1yiq_A Quinohemoprotein alcoho 97.1 0.0032 1.1E-07 41.9 7.4 49 53-106 454-502 (689)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 97.1 0.0094 3.2E-07 35.1 8.9 91 4-99 43-137 (314)
222 1kb0_A Quinohemoprotein alcoho 97.0 0.0035 1.2E-07 41.7 7.4 48 54-106 457-504 (677)
223 3g4e_A Regucalcin; six bladed 97.0 0.0047 1.6E-07 36.6 7.3 56 35-97 204-261 (297)
224 1flg_A Protein (quinoprotein e 97.0 0.0056 1.9E-07 40.1 7.8 80 5-93 464-543 (582)
225 2iwa_A Glutamine cyclotransfer 96.9 0.023 7.8E-07 33.7 10.4 93 5-105 84-177 (266)
226 2qc5_A Streptogramin B lactona 96.9 0.021 7.2E-07 33.2 11.0 91 6-106 166-257 (300)
227 3g4e_A Regucalcin; six bladed 96.8 0.03 1E-06 33.1 10.1 83 5-96 33-115 (297)
228 3dr2_A Exported gluconolactona 96.8 0.018 6.2E-07 34.1 8.4 66 33-106 48-113 (305)
229 2ad6_A Methanol dehydrogenase 96.8 0.009 3.1E-07 39.0 7.4 82 5-95 442-523 (571)
230 3hrp_A Uncharacterized protein 96.7 0.044 1.5E-06 34.2 11.9 97 6-106 239-351 (409)
231 1fwx_A Nitrous oxide reductase 96.7 0.011 3.6E-07 39.0 7.4 90 7-106 254-358 (595)
232 1kv9_A Type II quinohemoprotei 96.7 0.0099 3.4E-07 39.5 7.4 63 6-74 437-499 (668)
233 3c75_H MADH, methylamine dehyd 96.6 0.012 4E-07 37.3 7.0 48 54-106 350-399 (426)
234 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.014 4.8E-07 35.5 7.2 90 5-106 285-375 (376)
235 3nok_A Glutaminyl cyclase; bet 96.6 0.045 1.6E-06 32.5 10.4 93 5-106 114-207 (268)
236 2xzh_A Clathrin heavy chain 1; 96.6 0.035 1.2E-06 34.3 8.5 84 6-97 86-170 (365)
237 3q7m_A Lipoprotein YFGL, BAMB; 96.5 0.04 1.4E-06 33.5 8.9 65 5-72 61-131 (376)
238 3nol_A Glutamine cyclotransfer 96.5 0.055 1.9E-06 32.1 10.3 93 5-106 105-198 (262)
239 1bpo_A Protein (clathrin); cla 96.5 0.063 2.2E-06 34.5 9.4 84 6-97 85-169 (494)
240 2ghs_A AGR_C_1268P; regucalcin 96.4 0.065 2.2E-06 32.2 9.4 69 32-106 181-257 (326)
241 1yr2_A Prolyl oligopeptidase; 96.3 0.037 1.3E-06 37.0 8.3 92 6-105 242-346 (741)
242 1w6s_A Methanol dehydrogenase 96.3 0.03 1E-06 36.9 7.6 79 5-92 451-529 (599)
243 1fwx_A Nitrous oxide reductase 96.2 0.046 1.6E-06 36.1 8.1 92 4-106 172-305 (595)
244 1mda_H Methylamine dehydrogena 96.1 0.013 4.3E-07 36.4 5.0 63 7-74 294-357 (368)
245 2ghs_A AGR_C_1268P; regucalcin 96.0 0.11 3.7E-06 31.2 9.0 48 47-99 244-293 (326)
246 2qe8_A Uncharacterized protein 96.0 0.037 1.3E-06 33.5 6.6 28 79-106 248-275 (343)
247 3dr2_A Exported gluconolactona 95.7 0.16 5.3E-06 30.1 8.8 82 5-95 65-147 (305)
248 3hxj_A Pyrrolo-quinoline quino 95.6 0.16 5.6E-06 30.0 8.5 80 5-96 115-194 (330)
249 3iuj_A Prolyl endopeptidase; h 95.6 0.23 8E-06 33.1 9.5 89 7-106 259-356 (693)
250 3mbr_X Glutamine cyclotransfer 95.3 0.21 7E-06 29.3 11.2 92 5-105 83-175 (243)
251 2ece_A 462AA long hypothetical 95.1 0.36 1.2E-05 31.1 9.5 94 8-106 44-170 (462)
252 2xe4_A Oligopeptidase B; hydro 95.1 0.17 5.9E-06 34.1 7.9 81 7-97 201-289 (751)
253 1flg_A Protein (quinoprotein e 94.7 0.19 6.6E-06 33.0 7.1 49 53-106 465-513 (582)
254 2ad6_A Methanol dehydrogenase 94.5 0.35 1.2E-05 31.7 8.0 50 52-106 442-491 (571)
255 1kv9_A Type II quinohemoprotei 94.4 0.7 2.4E-05 30.9 10.1 52 55-106 271-330 (668)
256 3pbp_A Nucleoporin NUP82; beta 94.0 0.73 2.5E-05 29.6 10.0 97 6-106 40-155 (452)
257 3pbp_A Nucleoporin NUP82; beta 93.7 0.51 1.7E-05 30.3 7.2 73 30-103 125-206 (452)
258 1k3i_A Galactose oxidase precu 93.7 0.72 2.5E-05 30.6 8.3 84 8-97 220-305 (656)
259 1xi4_A Clathrin heavy chain; a 92.9 0.43 1.5E-05 35.3 6.5 84 6-97 85-169 (1630)
260 1npe_A Nidogen, entactin; glyc 92.6 0.86 2.9E-05 26.3 10.3 91 5-104 56-150 (267)
261 3hxj_A Pyrrolo-quinoline quino 91.7 1.2 4.1E-05 26.2 8.6 85 5-104 155-239 (330)
262 2p9w_A MAL S 1 allergenic prot 91.7 0.47 1.6E-05 29.2 5.0 98 5-106 98-212 (334)
263 1ijq_A LDL receptor, low-densi 91.4 1.4 4.9E-05 26.3 9.0 91 6-105 9-104 (316)
264 2xzh_A Clathrin heavy chain 1; 91.0 1.8 6.3E-05 26.9 9.8 51 48-102 275-325 (365)
265 3tc9_A Hypothetical hydrolase; 90.9 2 6.8E-05 27.1 8.1 68 33-105 229-297 (430)
266 3v65_B Low-density lipoprotein 90.9 1.9 6.4E-05 26.7 9.0 89 7-104 96-185 (386)
267 2fp8_A Strictosidine synthase; 90.8 1.6 5.5E-05 25.9 8.7 83 6-98 164-248 (322)
268 1k3i_A Galactose oxidase precu 90.1 2.1 7.2E-05 28.4 7.3 84 8-98 433-530 (656)
269 1npe_A Nidogen, entactin; glyc 89.8 1.8 6.2E-05 24.9 7.9 91 7-105 10-106 (267)
270 3qqz_A Putative uncharacterize 88.4 2.6 8.8E-05 24.8 6.9 69 31-105 28-96 (255)
271 1n7d_A LDL receptor, low-densi 88.2 2.1 7.3E-05 28.9 6.4 53 6-63 385-437 (699)
272 2p4o_A Hypothetical protein; p 88.0 2.8 9.5E-05 24.8 8.8 55 33-95 215-274 (306)
273 4fhn_B Nucleoporin NUP120; pro 87.1 0.7 2.4E-05 32.9 3.7 23 47-69 252-274 (1139)
274 1n7d_A LDL receptor, low-densi 87.0 5.4 0.00018 27.0 9.8 93 6-106 474-568 (699)
275 3v64_C Agrin; beta propeller, 86.8 3.7 0.00013 25.0 9.5 67 32-104 75-142 (349)
276 4gq2_M Nucleoporin NUP120; bet 86.1 0.61 2.1E-05 32.6 3.0 24 47-70 250-273 (950)
277 1bpo_A Protein (clathrin); cla 86.0 5.4 0.00018 26.0 10.5 51 48-102 274-324 (494)
278 4hw6_A Hypothetical protein, I 85.6 5 0.00017 25.4 7.4 67 35-105 233-300 (433)
279 2p4o_A Hypothetical protein; p 85.0 4.3 0.00015 24.0 8.0 57 32-97 34-90 (306)
280 3p5b_L Low density lipoprotein 83.3 6.2 0.00021 24.6 10.2 90 7-105 92-186 (400)
281 3f7f_A Nucleoporin NUP120; nuc 82.1 1.1 3.6E-05 30.7 2.7 24 47-70 234-257 (729)
282 3amr_A 3-phytase; beta-propell 81.7 7.4 0.00025 24.3 8.1 93 5-106 151-260 (355)
283 3tc9_A Hypothetical hydrolase; 81.2 8 0.00027 24.4 7.5 88 7-105 159-253 (430)
284 3v64_C Agrin; beta propeller, 81.0 7.3 0.00025 23.7 11.0 66 33-104 119-186 (349)
285 2xe4_A Oligopeptidase B; hydro 80.6 11 0.00038 25.6 8.2 89 8-99 248-340 (751)
286 3ei3_A DNA damage-binding prot 80.0 15 0.00051 26.7 8.7 50 53-105 531-587 (1158)
287 3kya_A Putative phosphatase; s 79.9 10 0.00035 24.8 7.1 69 33-105 250-337 (496)
288 3qqz_A Putative uncharacterize 79.9 7.1 0.00024 23.0 9.1 91 6-101 48-143 (255)
289 1w6s_A Methanol dehydrogenase 79.8 11 0.00038 25.1 10.4 21 5-25 180-200 (599)
290 3v65_B Low-density lipoprotein 79.7 8.6 0.00029 23.8 10.6 64 34-103 163-228 (386)
291 4gq2_M Nucleoporin NUP120; bet 69.5 6.7 0.00023 27.7 4.0 27 80-106 237-263 (950)
292 3sre_A PON1, serum paraoxonase 68.7 18 0.00062 22.4 8.7 28 79-106 221-249 (355)
293 2fp8_A Strictosidine synthase; 67.0 17 0.00058 21.5 7.7 31 32-65 21-51 (322)
294 2vpj_A Kelch-like protein 12; 66.1 17 0.00059 21.2 7.3 55 6-65 174-233 (301)
295 1ijq_A LDL receptor, low-densi 65.9 19 0.00064 21.5 10.6 65 33-103 80-146 (316)
296 2xn4_A Kelch-like protein 2; s 62.7 20 0.0007 20.9 7.5 55 6-65 172-231 (302)
297 3p5b_L Low density lipoprotein 61.8 26 0.00089 21.8 10.0 66 33-104 205-272 (400)
298 1uhe_A Aspartate 1-decarboxyla 61.7 12 0.00042 18.7 3.1 24 5-28 15-38 (97)
299 4hw6_A Hypothetical protein, I 61.6 28 0.00095 22.0 10.8 100 5-106 248-371 (433)
300 3m0c_C LDL receptor, low-densi 60.8 39 0.0013 23.5 10.1 67 32-104 516-584 (791)
301 3sov_A LRP-6, low-density lipo 60.5 25 0.00085 21.1 9.8 67 33-105 125-193 (318)
302 3ei3_A DNA damage-binding prot 60.4 47 0.0016 24.3 7.3 93 7-106 807-910 (1158)
303 3ii7_A Kelch-like protein 7; p 58.8 25 0.00085 20.6 7.5 55 6-65 23-81 (306)
304 1tl2_A L10, protein (tachylect 57.5 27 0.00092 20.5 5.1 67 31-105 42-112 (236)
305 3plx_B Aspartate 1-decarboxyla 57.4 16 0.00056 18.4 3.1 24 5-28 16-39 (102)
306 3f7f_A Nucleoporin NUP120; nuc 55.8 8.3 0.00028 26.6 2.5 21 5-25 239-259 (729)
307 1xi4_A Clathrin heavy chain; a 55.0 70 0.0024 24.6 9.1 51 48-102 274-324 (1630)
308 4fhn_B Nucleoporin NUP120; pro 53.1 8.5 0.00029 27.7 2.3 27 80-106 239-265 (1139)
309 4a0p_A LRP6, LRP-6, low-densit 52.5 50 0.0017 22.2 9.8 92 6-104 14-106 (628)
310 3m0c_C LDL receptor, low-densi 50.3 62 0.0021 22.6 10.7 58 33-96 474-532 (791)
311 3das_A Putative oxidoreductase 49.9 43 0.0015 20.7 4.8 27 79-105 32-58 (347)
312 1vc3_B L-aspartate-alpha-decar 48.7 25 0.00085 17.5 3.6 23 5-27 16-38 (96)
313 3s94_A LRP-6, low-density lipo 47.8 60 0.0021 21.7 9.3 93 5-104 16-110 (619)
314 3oug_A Aspartate 1-decarboxyla 47.7 28 0.00096 17.9 3.5 23 5-27 43-65 (114)
315 4a9v_A PHOX; hydrolase, beta-p 46.9 50 0.0017 22.3 4.9 39 55-96 510-548 (592)
316 3zwu_A Alkaline phosphatase PH 46.2 66 0.0022 21.7 6.7 37 57-96 512-548 (592)
317 1pqh_A Aspartate 1-decarboxyla 44.6 34 0.0012 18.4 3.2 23 5-27 57-79 (143)
318 3mwp_A Nucleoprotein; structur 43.4 5.4 0.00019 25.8 0.2 15 5-19 165-179 (577)
319 2c45_A Aspartate 1-decarboxyla 41.9 40 0.0014 18.0 3.3 23 5-27 40-62 (139)
320 3q6k_A 43.2 kDa salivary prote 41.6 65 0.0022 20.3 9.8 86 4-89 120-230 (381)
321 2uvk_A YJHT; unknown function, 39.8 60 0.002 19.4 5.2 39 55-99 286-326 (357)
322 2be1_A Serine/threonine-protei 39.1 68 0.0023 19.8 5.9 61 4-66 17-79 (339)
323 1sr4_A CDT A, cytolethal diste 36.3 62 0.0021 18.6 5.0 62 4-71 105-167 (206)
324 1zgk_A Kelch-like ECH-associat 35.7 67 0.0023 18.8 7.3 55 6-65 183-242 (308)
325 4asc_A Kelch repeat and BTB do 33.8 73 0.0025 18.7 7.8 55 6-65 116-176 (315)
326 3amr_A 3-phytase; beta-propell 33.6 89 0.003 19.6 10.8 90 6-102 98-203 (355)
327 2xbg_A YCF48-like protein; pho 32.8 80 0.0027 18.8 9.5 63 33-105 253-318 (327)
328 3sbq_A Nitrous-oxide reductase 32.5 1.2E+02 0.0042 20.8 8.2 73 31-106 324-405 (638)
329 3a9g_A Putative uncharacterize 30.3 75 0.0026 19.4 3.7 26 79-105 29-54 (354)
330 1ukf_A Avirulence protein AVRP 28.0 54 0.0018 18.6 2.5 27 80-106 120-147 (188)
331 2cy5_A Epidermal growth factor 27.9 76 0.0026 17.0 3.5 24 3-26 54-77 (140)
332 3s94_A LRP-6, low-density lipo 27.0 1.5E+02 0.005 20.0 9.5 67 32-104 351-418 (619)
333 2p9w_A MAL S 1 allergenic prot 26.5 1.2E+02 0.0041 18.8 7.5 65 29-95 12-82 (334)
334 2woz_A Kelch repeat and BTB do 25.4 1.1E+02 0.0037 18.0 5.4 15 6-20 174-188 (318)
335 3kya_A Putative phosphatase; s 25.2 1.5E+02 0.0051 19.5 10.4 93 7-106 162-275 (496)
336 3sov_A LRP-6, low-density lipo 23.7 1.3E+02 0.0043 18.1 10.0 65 32-104 168-233 (318)
337 1cru_A Protein (soluble quinop 22.3 1.6E+02 0.0055 18.8 5.6 17 81-97 29-45 (454)
338 2ism_A Putative oxidoreductase 22.3 1.4E+02 0.0048 18.1 6.5 49 32-89 33-85 (352)
339 3d8d_A Amyloid beta A4 precurs 21.7 59 0.002 17.6 1.9 23 3-25 60-82 (148)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=4.6e-21 Score=116.58 Aligned_cols=98 Identities=17% Similarity=0.272 Sum_probs=79.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+++++....+....+...+.++.|+|.+... +++|+.|+.|++||+++++++..+.+|. ..|.
T Consensus 188 ~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--l~sg~~dg~v~~wd~~~~~~~~~~~~h~----~~v~ 261 (344)
T 4gqb_B 188 CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV--FVFGDENGTVSLVDTKSTSCVLSSAVHS----QCVT 261 (344)
T ss_dssp EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE--EEEEETTSEEEEEESCC--CCEEEECCS----SCEE
T ss_pred eccccccccccccccceeeeeecceeeccceeeeecCCCCcc--eEEeccCCcEEEEECCCCcEEEEEcCCC----CCEE
Confidence 457999999999999987766655444445678888876653 7899999999999999999999999998 8999
Q ss_pred EEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
+++|+|++ .+|++|+.|++|++||
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEEC
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEE
Confidence 99999987 5799999999999997
No 2
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.84 E-value=2.3e-20 Score=113.22 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=49.3
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeE-EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL-DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++++.|++|++||+.+++++.++.+|. ..+. .++|+|++++|++|+.|++|++||
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~----~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVS----DQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC------CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCC----CCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 5888899999999999999999998887 5544 689999999999999999999996
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.84 E-value=2.3e-20 Score=112.41 Aligned_cols=95 Identities=17% Similarity=0.269 Sum_probs=84.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+++++....+.. |...+..+.|+|.+.. +++++.|+.|++||+.+++++..+..|. ..|.
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~~~~---l~s~s~D~~v~iwd~~~~~~~~~~~~h~----~~v~ 294 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTLSG--HASWVLNVAFCPDDTH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQ----DQVW 294 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred EcCCCeEEEEECCCcceeEEEcC--CCCceEEEEECCCCCE---EEEEeCCCcEEEEeCCCCEEEEEEcCCC----CcEE
Confidence 45789999999999888555544 4555777999998887 8999999999999999999999998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..|++++.|++|++||
T Consensus 295 ~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 295 GVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.84 E-value=1.6e-20 Score=112.18 Aligned_cols=95 Identities=22% Similarity=0.303 Sum_probs=83.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...||+|++||+.+++.+..+.. +...+..+.|.|.+.. +++++.|+.|++||+.+++++..+.+|. ..|.
T Consensus 31 ~~~dg~v~lWd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~s~s~d~~i~vwd~~~~~~~~~~~~h~----~~v~ 101 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVEVRSIQV--TETPVRAGKFIARKNW---IIVGSDDFRIRVFNYNTGEKVVDFEAHP----DYIR 101 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred EcCCCcEEEEECCCCceeEEeec--cCCcEEEEEEeCCCCE---EEEECCCCEEEEEECCCCcEEEEEeCCC----CcEE
Confidence 35699999999999988665554 3445677889998887 8999999999999999999999999998 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++.++++|+.|++|++||
T Consensus 102 ~~~~~~~~~~l~sgs~D~~v~lWd 125 (304)
T 2ynn_A 102 SIAVHPTKPYVLSGSDDLTVKLWN 125 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCEEEEECCCCeEEEEE
Confidence 999999999999999999999996
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.84 E-value=2.5e-20 Score=112.78 Aligned_cols=97 Identities=9% Similarity=0.077 Sum_probs=83.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+++++.+..+....+...+..+.|+|.+.. +++++.|+.|++||+.+++.+..+.+|. ..|.
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~---l~~g~~d~~i~vwd~~~~~~~~~~~~h~----~~v~ 316 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL---LLAGYDDFNCNVWDALKADRAGVLAGHD----NRVS 316 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE---EEEECCCCeEEEEEcccCcEeeEeecCC----CcEE
Confidence 45799999999999887655544333334667889998877 8999999999999999999888899898 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++|+.|++|++||
T Consensus 317 ~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 317 CLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999997
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=114.20 Aligned_cols=97 Identities=20% Similarity=0.276 Sum_probs=83.2
Q ss_pred cCCCceEEEEeCccCceeeecc--cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARND--CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
...||+|++||+.+++.+.... ...|...+.++.|+|.+.. |++++.|+.|++||+.+++++..+.+|. ..
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~---l~sgs~d~~i~iwd~~~~~~~~~~~~h~----~~ 171 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ---AVSGSKDICIKVWDLAQQVVLSSYRAHA----AQ 171 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SC
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCE---EEEEeCCCeEEEEECCCCcEEEEEcCcC----Cc
Confidence 4579999999999987644332 3345666778999998887 8999999999999999999999999998 89
Q ss_pred eEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
|.+++|+|++. .+++++.|++|++||
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred eEEEEecCCCCCceeeecccccccccc
Confidence 99999999875 789999999999996
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.83 E-value=7.8e-20 Score=110.07 Aligned_cols=94 Identities=17% Similarity=0.260 Sum_probs=83.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||+++++....+.+|. ..|.+
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spd~~~---l~s~s~dg~i~iwd~~~~~~~~~~~~h~----~~v~~ 253 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSPDSQL---LVTASDDGYIKIYDVQHANLAGTLSGHA----SWVLN 253 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECC--CSSCCCEEEECTTSCE---EEEECTTSCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred cCCCeEEEEECCCCcEEEEEcc--cCCceeEEEEcCCCCE---EEEEcCCCeEEEEECCCcceeEEEcCCC----CceEE
Confidence 4689999999999988665554 4556788999998887 8999999999999999998888898888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.++++++.|++|++||
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWD 276 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999996
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.83 E-value=3.7e-20 Score=114.53 Aligned_cols=95 Identities=17% Similarity=0.323 Sum_probs=84.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++++..+.. |...+..+.|+|.+.. +++++.|+.|++||+.+++++..+.+|. ..|.
T Consensus 314 gs~D~~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~~~g~~---l~s~s~D~~i~vwd~~~~~~~~~~~~h~----~~v~ 384 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKF---ILSCADDKTLRVWDYKNKRCMKTLNAHE----HFVT 384 (410)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSC---EEEEETTTEEEEECCTTSCCCEEEECCS----SCEE
T ss_pred EeCCCeEEEEECCCCceEEEEEC--CCCcEEEEEEcCCCCE---EEEEeCCCeEEEEECCCCceEEEEcCCC----CcEE
Confidence 35689999999999998666654 4555677899998888 8999999999999999999999999998 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++.++++|+.|++|++|+
T Consensus 385 ~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 385 SLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEe
Confidence 999999999999999999999997
No 9
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.83 E-value=8.8e-20 Score=112.93 Aligned_cols=95 Identities=18% Similarity=0.272 Sum_probs=81.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|++|++||+.++++...+.. +..+..+.|.+.+.... +++|+.|+.|++||+.+++++..+.+|. ..|.+
T Consensus 298 s~D~~I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~~lv-~~sg~~d~~I~iwd~~~~~~v~~l~gH~----~~V~~ 369 (420)
T 4gga_A 298 TSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELI-SGHGFAQNQLVIWKYPTMAKVAELKGHT----SRVLS 369 (420)
T ss_dssp TTTCEEEEEETTTTEEEEEEEC---SSCEEEEEEETTTTEEE-EEECTTTCCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred cCCCEEEEEeCCccccceeecc---ccceeeeeecCCCCeEE-EEEecCCCEEEEEECCCCcEEEEEcCCC----CCEEE
Confidence 4689999999999998666554 34567788888887731 1345689999999999999999999998 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.+|+||+.|++|++||
T Consensus 370 l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 370 LTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp EEECTTSSCEEEEETTTEEEEEC
T ss_pred EEEcCCCCEEEEEecCCeEEEEE
Confidence 99999999999999999999997
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.83 E-value=3.4e-20 Score=112.21 Aligned_cols=95 Identities=18% Similarity=0.325 Sum_probs=83.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||++++++...+.+|. ..|.
T Consensus 160 ~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~sg~~d~~v~~wd~~~~~~~~~~~~h~----~~v~ 230 (340)
T 1got_B 160 SSGDTTCALWDIETGQQTTTFTG--HTGDVMSLSLAPDTRL---FVSGACDASAKLWDVREGMCRQTFTGHE----SDIN 230 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCSEEEEECCCS----SCEE
T ss_pred EECCCcEEEEECCCCcEEEEEcC--CCCceEEEEECCCCCE---EEEEeCCCcEEEEECCCCeeEEEEcCCc----CCEE
Confidence 45799999999999988655544 4556777899998776 8999999999999999999888998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|++|++||
T Consensus 231 ~v~~~p~~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 231 AICFFPNGNAFATGSDDATCRLFD 254 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEE
Confidence 999999999999999999999996
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.82 E-value=1e-19 Score=110.74 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=82.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+++++.+..+....+...+..+.|+|.+.. +++++.|+.|++||+.+++.+..+.+|. ..|.
T Consensus 258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~---l~~g~~d~~i~vwd~~~~~~~~~l~~h~----~~v~ 330 (354)
T 2pbi_B 258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL---LFAGYNDYTINVWDVLKGSRVSILFGHE----NRVS 330 (354)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCSEEEEECCCS----SCEE
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE---EEEEECCCcEEEEECCCCceEEEEECCC----CcEE
Confidence 45799999999998877555544322334556888888877 8999999999999999999888888888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++.+|++|+.|++|++|+
T Consensus 331 ~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999996
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.81 E-value=7.6e-20 Score=109.22 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=81.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v 81 (106)
...|++|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|++|++||++++. ....+.+|. ..|
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~sgs~D~~v~lWd~~~~~~~~~~~~~h~----~~v 143 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPY---VLSGSDDLTVKLWNWENNWALEQTFEGHE----HFV 143 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSE---EEEEETTSCEEEEEGGGTTEEEEEECCCC----SCE
T ss_pred ECCCCEEEEEECCCCcEEEEEeC--CCCcEEEEEEcCCCCE---EEEECCCCeEEEEECCCCcchhhhhcccC----CcE
Confidence 35799999999999998665554 4556778999998887 8999999999999998774 455677787 899
Q ss_pred EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.+++|+| ++..+++|+.|++|++||
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 9999999 678999999999999996
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.81 E-value=6.3e-20 Score=113.51 Aligned_cols=95 Identities=17% Similarity=0.274 Sum_probs=83.7
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++....+.. |...+..+.|.|.+.. +++|+.|++|++||+.+++++..+.+|. ..|.
T Consensus 126 ~s~Dg~i~vwd~~~~~~~~~l~~--h~~~V~~v~~~~~~~~---l~sgs~D~~i~iwd~~~~~~~~~~~~h~----~~V~ 196 (410)
T 1vyh_C 126 ASEDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKL---LASCSADMTIKLWDFQGFECIRTMHGHD----HNVS 196 (410)
T ss_dssp EESSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSE---EEEEETTSCCCEEETTSSCEEECCCCCS----SCEE
T ss_pred EeCCCeEEEEECCCCcEEEEEec--cCCcEEEEEEcCCCCE---EEEEeCCCeEEEEeCCCCceeEEEcCCC----CCEE
Confidence 35799999999999988555544 4556777999988776 8999999999999999999999999898 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|++|++||
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999996
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.81 E-value=1.6e-19 Score=110.11 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=79.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+++++.+..+.. +...+..+.|+|.+... |++++.|++|++||+++++++..+ +|. ..|.+
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~--lasgs~D~~i~iwd~~~~~~~~~~-~H~----~~V~~ 316 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAV--HSQNITGLAYSYHSSPF--LASISEDCTVAVLDADFSEVFRDL-SHR----DFVTG 316 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECC--CSSCEEEEEECSSSSCC--EEEEETTSCEEEECTTSCEEEEEC-CCS----SCEEE
T ss_pred ecccceeEEECCCCcEeEEEec--cceeEEEEEEcCCCCCE--EEEEeCCCEEEEEECCCCcEeEEC-CCC----CCEEE
Confidence 4689999999999888655544 45556778999987543 789999999999999998877554 577 89999
Q ss_pred EEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
++|+| ++..|++++.|++|++|+
T Consensus 317 vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 317 VAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEE
Confidence 99999 789999999999999996
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.81 E-value=1.4e-19 Score=109.48 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=80.2
Q ss_pred cCCCceEEEEeCccCce-----eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135 3 KVPSSVIYIWTLLELQT-----YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 77 (106)
...|++|++||+.+.+. ........|...+..+.|+|.+.. +++++.|++|++||+++++++..+.+|.
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~---l~s~s~D~~v~lwd~~~~~~~~~~~~h~--- 118 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF---AISSSWDKTLRLWDLRTGTTYKRFVGHQ--- 118 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE---EEEEETTSEEEEEETTSSCEEEEEECCC---
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE---EEEEcCCCcEEEEECCCCcEEEEEcCCC---
Confidence 45799999999975431 111222334555677889988777 8999999999999999999999999898
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 119 -~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 119 -SEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp -SCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred -CcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 8999999999999999999999999996
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.81 E-value=2.2e-19 Score=109.28 Aligned_cols=97 Identities=18% Similarity=0.269 Sum_probs=81.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++.+..+.. |...+..+.+.|... +..+++++.|+.|++||+++++++..+..|. ..|.
T Consensus 172 ~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~-g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~----~~v~ 244 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSET-GNTFVSGGCDKKAMVWDMRSGQCVQAFETHE----SDVN 244 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECCCSS-CCEEEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred EeCCCcEEEEeCCCCeEEEEEcC--CCCCeEEEEEEeCCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCC----CCeE
Confidence 45799999999999998666654 344455677776432 1127999999999999999999999998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|+++++||
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999996
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.81 E-value=3e-19 Score=108.88 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=83.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+++++.........+...+..+.|+|.+... +++++.|+.|++||+++++++..+..|. ..|.
T Consensus 200 ~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~--la~g~~d~~i~~wd~~~~~~~~~~~~~~----~~v~ 273 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT--FACGDETGNVSLVNIKNPDSAQTSAVHS----QNIT 273 (357)
T ss_dssp EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE--EEEEESSSCEEEEESSCGGGCEEECCCS----SCEE
T ss_pred eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce--EEEeecccceeEEECCCCcEeEEEeccc----eeEE
Confidence 356899999999998876665554455556678899886653 7899999999999999999999999888 8999
Q ss_pred EEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
+++|+|++ .+|++++.|++|++||
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 99999976 5799999999999997
No 18
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.80 E-value=3.1e-19 Score=108.65 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=79.1
Q ss_pred cCCCceEEEEeCccCce----------------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCcc
Q psy17135 3 KVPSSVIYIWTLLELQT----------------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKT 65 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~ 65 (106)
...||.|++||+.+++. +..+ ..|...+.++.|+|.+.. +++++.|++ |++||+++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~h~~~v~~~~~s~~g~~---l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KAHTNPIKMVRLNRKSDM---VATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEE--CCCSSCEEEEEECTTSSE---EEEEETTCSEEEEEETTTCC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEE--EccCCceEEEEECCCCCE---EEEEeCCCCEEEEEECCCCc
Confidence 35789999999998651 2222 335566778999998877 899999998 9999999999
Q ss_pred chheec-c-ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 CVQEIT-A-HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..+. + |. ..|.+++|+|++.++++++.|++|++||
T Consensus 230 ~~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 230 LVREFRRGLDR----ADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEEEECTTCC----SCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEEEEcCCCC----CcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 998887 4 77 8999999999999999999999999996
No 19
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.80 E-value=2.8e-19 Score=109.32 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=76.1
Q ss_pred eEEEEeCccCceee--ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEE
Q psy17135 8 VIYIWTLLELQTYA--RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDV 84 (106)
Q Consensus 8 ~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~ 84 (106)
++++||+....... ......+...+.++.|+|.+.. |++|+.|++|++||+++++++..+ .+|. ..|+++
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~---lasgs~D~~V~iwd~~~~~~~~~~~~gH~----~~V~~v 318 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL---AVLASNDNSIALVKLKDLSMSKIFKQAHS----FAITEV 318 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE---EEEEETTSCEEEEETTTTEEEEEETTSSS----SCEEEE
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCCc---eEEEcCCCEEEEEECCCCcEEEEecCccc----CCEEEE
Confidence 68889987655421 2223334555677899998887 899999999999999999988875 6788 899999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|+|++++|+||+.|++|+|||
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999996
No 20
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.80 E-value=8.9e-19 Score=104.15 Aligned_cols=95 Identities=18% Similarity=0.272 Sum_probs=79.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..+++|++||............ ...+..+.|.|.+.... +++++.|+.|++||+++++++..+.+|. ..|.+
T Consensus 218 ~~~~~i~lwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~-~~sg~~d~~i~iwd~~~~~~~~~l~gH~----~~V~~ 289 (318)
T 4ggc_A 218 TSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELI-SGHGFAQNQLVIWKYPTMAKVAELKGHT----SRVLS 289 (318)
T ss_dssp TTTCEEEEEETTTCCEEEEEEC---SSCEEEEEEETTTTEEE-EEECTTTCCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred CCCCEEEEEecccccccccccc---eeeeeeeeecccccceE-EEEEcCCCEEEEEECCCCcEEEEEcCCC----CCEEE
Confidence 4678999999998887444332 34466688888777632 2456789999999999999999999998 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.+|+||+.|++|++||
T Consensus 290 l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 290 LTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp EEECTTSSCEEEEETTTEEEEEC
T ss_pred EEEcCCCCEEEEEecCCeEEEEE
Confidence 99999999999999999999997
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.80 E-value=4.2e-19 Score=108.81 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=79.9
Q ss_pred cCCCceEEEEeCccCceeeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~ 78 (106)
...|++|++||+.+++.+..+.. ..|...+..+.+.+..... +++|+.|+.|++||++. ++++..+.+|.
T Consensus 176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~--l~sgs~D~~v~~wd~~~~~~~~~~~~~h~---- 249 (380)
T 3iz6_a 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM--FISGSCDTTVRLWDLRITSRAVRTYHGHE---- 249 (380)
T ss_dssp ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE--EEEEETTSCEEEEETTTTCCCCEEECCCS----
T ss_pred ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE--EEEEECCCeEEEEECCCCCcceEEECCcC----
Confidence 45799999999999988665532 2244455667777644333 89999999999999984 57788888888
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 8999999999999999999999999996
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.80 E-value=8.9e-19 Score=107.39 Aligned_cols=98 Identities=7% Similarity=0.006 Sum_probs=80.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCC-----CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee----cc
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPEL-----NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI----TA 72 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~----~~ 72 (106)
+...|++|++||+++++.+..+..... ...+..+.|+|.+.. +++|+.|+.|++||..+++.+..+ .+
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~---l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL---LFAGYSNGDCYVWDTLLAEMVLNLGTLQNS 342 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE---EEEECTTSCEEEEETTTCCEEEEECCSCSS
T ss_pred EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE---EEEEECCCCEEEEECCCCceEEEEecccCC
Confidence 346899999999999888665544221 123567899998887 899999999999999988776665 45
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|. ..|.+++|+|++..|++|+.|++|++|+
T Consensus 343 h~----~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 343 HE----GRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CC----CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CC----CceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 65 8999999999999999999999999996
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.79 E-value=3.2e-19 Score=107.16 Aligned_cols=96 Identities=16% Similarity=0.285 Sum_probs=80.5
Q ss_pred CcCCCceEEEEeCccCc-----eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135 2 QKVPSSVIYIWTLLELQ-----TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK 76 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 76 (106)
+...|++|++||+.... ++..+. .|...+..+.|.|.+.. +++++.|++|++||+.+++++..+.+|.
T Consensus 35 s~s~D~~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~---l~s~s~D~~v~~wd~~~~~~~~~~~~h~-- 107 (319)
T 3frx_A 35 SASRDKTLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLTADGAY---ALSASWDKTLRLWDVATGETYQRFVGHK-- 107 (319)
T ss_dssp EEETTSEEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCS--
T ss_pred EecCCccEEEecCCCCCccccccceEEe--CCcccEEEEEECCCCCE---EEEEeCCCEEEEEECCCCCeeEEEccCC--
Confidence 34679999999987532 222232 34555667889998877 8999999999999999999999999998
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 108 --~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 108 --SDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp --SCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred --CcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 8999999999999999999999999996
No 24
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.6e-19 Score=114.99 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=80.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|+|||++++++...+........+..+.|+|.+.. +++++.|++|++||++++.++..+.+|. ..|.
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~---l~s~~~d~tv~lwd~~~~~~~~~l~gH~----~~V~ 401 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS---YIYSDGASSLRAVPSRAAFAVHPLVSRE----TTIT 401 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE---EEEECSSSEEEEEETTCTTCCEEEEECS----SCEE
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe---EEEeCCCCcEEEEECcccccceeeecCC----CceE
Confidence 46799999999998776444433211123567899998777 7999999999999999998888888888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++|+.|++|++||
T Consensus 402 sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 402 AIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp EEECCSSCCBCEEEETTTEEECCB
T ss_pred EEEeCCCCCeEEEEECCCEEEEEe
Confidence 999999999999999999999996
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.78 E-value=6.7e-19 Score=113.48 Aligned_cols=95 Identities=20% Similarity=0.193 Sum_probs=81.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-------cccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-------AHRK 75 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-------~~~~ 75 (106)
...|++|++||..++++...+.. |...+.++.|+|.+.. +++++.|++|++||+.+++++..+. +|.
T Consensus 166 ~s~D~~v~lwd~~~~~~~~~l~~--H~~~V~~v~fspdg~~---las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~- 239 (611)
T 1nr0_A 166 GSDDNTVAIFEGPPFKFKSTFGE--HTKFVHSVRYNPDGSL---FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS- 239 (611)
T ss_dssp EETTSCEEEEETTTBEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS-
T ss_pred EeCCCeEEEEECCCCeEeeeecc--ccCceEEEEECCCCCE---EEEEECCCcEEEEECCCCcEeeeeccccccccccC-
Confidence 45789999999998887555443 5666778999998877 8999999999999999988777663 566
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..|++++.|++|++||
T Consensus 240 ---~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 240 ---GSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ---CCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 8999999999999999999999999996
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=8.2e-19 Score=106.38 Aligned_cols=97 Identities=18% Similarity=0.256 Sum_probs=80.3
Q ss_pred cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~ 79 (106)
...|++|++||+.++....... ...|...+..+.|+|.+.. |++++.|+.+++|+..++ +++..+.+|. .
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~---l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~----~ 106 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY---LASASFDATTCIWKKNQDDFECVTTLEGHE----N 106 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSE---EEEEETTSCEEEEEECCC-EEEEEEECCCS----S
T ss_pred EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCE---EEEEECCCcEEEEEccCCCeEEEEEccCCC----C
Confidence 4579999999998876432322 2335556777999998877 899999999999998876 4567788888 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|.+++|+|++.+|++++.|++|++||
T Consensus 107 ~v~~v~~sp~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCeEEEEE
Confidence 999999999999999999999999996
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.6e-18 Score=104.51 Aligned_cols=97 Identities=11% Similarity=0.150 Sum_probs=73.2
Q ss_pred cCCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-------ccchheeccc
Q psy17135 3 KVPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-------KTCVQEITAH 73 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-------~~~~~~~~~~ 73 (106)
...|++|++||+.++. ....+....|...+..+.|+|.+.. +++++.|+.|++|++.. .+++..+.+|
T Consensus 30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~---las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSL---LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSE---EEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCE---EEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence 4579999999998753 3222322225556777999998877 89999999999999853 2345667778
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. ..|.+++|+|++.+|++|+.|++|++||
T Consensus 107 ~----~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 107 E----NEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp ------CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred C----CcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 7 8999999999999999999999999996
No 28
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.78 E-value=4.4e-18 Score=101.18 Aligned_cols=99 Identities=15% Similarity=0.315 Sum_probs=82.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---------
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK--------- 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------- 75 (106)
.|++|+|||+.+++++..+..+.|...+.++.|+|.+.. +++|+.|+.|++|++++++++..+.+|..
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~---l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~ 119 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNY---LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS 119 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCE---EEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC
Confidence 388999999999998877777666666778999998887 89999999999999999887766554431
Q ss_pred ----------------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 ----------------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ----------------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|...+..+.+++++..+++++.|+.|++||
T Consensus 120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 1346677888999999999999999999986
No 29
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.3e-18 Score=102.98 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=79.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch-heecc-ccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV-QEITA-HRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~-~~~~~-~~~~~~~~ 80 (106)
...|++|++||+.+++.+...... +...+.++.|+|.+.. +++|+.|+.|++||+++++.+ ..+.. |. ..
T Consensus 145 ~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~---lasg~~dg~i~iwd~~~~~~~~~~~~~~h~----~~ 216 (343)
T 3lrv_A 145 ADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLL---LALYSPDGILDVYNLSSPDQASSRFPVDEE----AK 216 (343)
T ss_dssp EETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEECTTSCE---EEEECTTSCEEEEESSCTTSCCEECCCCTT----SC
T ss_pred EeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEECCCCCE---EEEEcCCCEEEEEECCCCCCCccEEeccCC----CC
Confidence 457999999999999884444332 3345778999998877 899999999999999998877 67776 77 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.+++|+|++.++++++ ++.|++||
T Consensus 217 v~~l~fs~~g~~l~s~~-~~~v~iwd 241 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVEC-DQTVVCFD 241 (343)
T ss_dssp EEEEEECTTSSEEEEEE-SSBEEEEE
T ss_pred EEEEEEeCCCCEEEEEe-CCeEEEEE
Confidence 99999999999999999 45999996
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.77 E-value=2.8e-18 Score=109.17 Aligned_cols=92 Identities=25% Similarity=0.360 Sum_probs=79.4
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|++|++||. +++.+..+.. |...+..+.|+|.+.. |++++.|+.|++||. +++++..+.+|. ..|.+
T Consensus 486 ~~d~~i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~dg~~---l~s~~~dg~v~lwd~-~~~~~~~~~~h~----~~v~~ 554 (577)
T 2ymu_A 486 SDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQT---IASASDDKTVKLWNR-NGQLLQTLTGHS----SSVWG 554 (577)
T ss_dssp ETTSEEEEEET-TSCEEEEEEC--CSSCEEEEEECTTSSC---EEEEETTSEEEEECT-TSCEEEEEECCS----SCEEE
T ss_pred eCCCEEEEEcC-CCCEEEEEeC--CCCCEEEEEEcCCCCE---EEEEECcCEEEEEeC-CCCEEEEEcCCC----CCEEE
Confidence 46899999995 5666555544 4556777999998888 899999999999996 678888899998 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++++|+|++.|++|++||
T Consensus 555 ~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 555 VAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999998
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.77 E-value=2e-18 Score=103.00 Aligned_cols=95 Identities=21% Similarity=0.423 Sum_probs=83.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||+++++++..+..|. ..+.
T Consensus 83 ~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~v~ 153 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLKTLKG--HSNYVFCCNFNPQSNL---IVSGSFDESVRIWDVKTGKCLKTLPAHS----DPVS 153 (312)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred ECCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCE---EEEEeCCCcEEEEECCCCEEEEEecCCC----CcEE
Confidence 35789999999999988665554 4555677889998877 8999999999999999999888888888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.|+|++..+++++.|+.|++||
T Consensus 154 ~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEE
Confidence 999999999999999999999996
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.77 E-value=1.9e-18 Score=103.05 Aligned_cols=95 Identities=15% Similarity=0.312 Sum_probs=83.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++....+.. |...+..+.|+|.+.. +++++.|+.|++||+++++++..+..|. ..+.
T Consensus 41 ~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~v~ 111 (312)
T 4ery_A 41 SSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNL---LVSASDDKTLKIWDVSSGKCLKTLKGHS----NYVF 111 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred eeCCCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCE---EEEECCCCEEEEEECCCCcEEEEEcCCC----CCEE
Confidence 35789999999999887555543 4555777999998877 8999999999999999999998998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|+.|++||
T Consensus 112 ~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 112 CCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEE
Confidence 999999999999999999999996
No 33
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.77 E-value=3.2e-18 Score=105.30 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=82.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++....+. .|...+..+.|+|.+.. +++++.|+.|++||+.+++.+..+..|. ..|.+
T Consensus 116 ~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~---l~s~s~d~~i~iwd~~~~~~~~~~~~h~----~~v~~ 186 (420)
T 3vl1_A 116 TTEGDIKVLDSNFNLQREIDQ--AHVSEITKLKFFPSGEA---LISSSQDMQLKIWSVKDGSNPRTLIGHR----ATVTD 186 (420)
T ss_dssp ETTSCEEEECTTSCEEEEETT--SSSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCCCEEEECCS----SCEEE
T ss_pred ECCCCEEEEeCCCcceeeecc--cccCccEEEEECCCCCE---EEEEeCCCeEEEEeCCCCcCceEEcCCC----CcEEE
Confidence 468999999999888744433 34566778999998776 8999999999999999999998998888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++..+++++.|+.+++||
T Consensus 187 ~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEEETTTTEEEEEETTSCEEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEeE
Confidence 99999999999999999999996
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.77 E-value=1.4e-18 Score=104.24 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=76.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~ 78 (106)
...|++|++||+.+++.........|...+..+.|.+. +.. |++++.|++|++||+++++ .+..+.+|.
T Consensus 31 gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~---l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~---- 103 (316)
T 3bg1_A 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNI---LASCSYDRKVIIWREENGTWEKSHEHAGHD---- 103 (316)
T ss_dssp EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSC---EEEEETTSCEEEECCSSSCCCEEEEECCCS----
T ss_pred EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCE---EEEEECCCEEEEEECCCCcceEEEEccCCC----
Confidence 45799999999988754222333335556777888753 555 8999999999999998874 455667777
Q ss_pred CCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|+ +.++++++.|++|++||
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~~i~lwd 133 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDGAISLLT 133 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred CceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence 89999999997 78999999999999996
No 35
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.76 E-value=1.5e-18 Score=106.85 Aligned_cols=99 Identities=12% Similarity=0.183 Sum_probs=79.4
Q ss_pred CCCceEEEEeCccCceeee---cccCCCCCCCCeeEeeeCC-----CCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 4 VPSSVIYIWTLLELQTYAR---NDCPELNSEPPACQTIPSS-----NISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
..|++|+|||+.+++.... .....|...+..+.|.|.. ..+.+|++++.|++|++||++++.++..+..|.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~- 186 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS- 186 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS-
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC-
Confidence 4699999999998865332 1234466677889999832 233448999999999999999888777777787
Q ss_pred cCCCCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
..+.+++|+|++. .+++++.|++|++||
T Consensus 187 ---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd 215 (393)
T 4gq1_A 187 ---SPGISVQFRPSNPNQLIVGERNGNIRIFD 215 (393)
T ss_dssp ---SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred ---CCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence 7999999999875 799999999999996
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.76 E-value=3.8e-18 Score=111.18 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=81.2
Q ss_pred CcCCCceEEEEeCccCcee---eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135 2 QKVPSSVIYIWTLLELQTY---ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
+...|++|++||+.+.... .......|...+.++.|+|.+.. +++++.|+.|++||+.+++++..+.+|.
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~---l~sgs~Dg~v~vwd~~~~~~~~~~~~h~---- 472 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF---ALSGSWDGELRLWDLAAGVSTRRFVGHT---- 472 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCS----
T ss_pred EEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE---EEEEeCCCcEEEEECCCCcceeEEeCCC----
Confidence 3567999999999764321 11122234555677899998877 8999999999999999999999999898
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 8999999999999999999999999997
No 37
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.75 E-value=4.8e-18 Score=101.13 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=75.2
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC----------CceEEEeeCCCCcEEEeeCCCcc----chhe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN----------ISLFDSRPGHDCSIRLWNLDNKT----CVQE 69 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s~~~d~~v~iwd~~~~~----~~~~ 69 (106)
..|++|++||++++..........|...+..+.|.|... .+..|++++.|+.|++||+++++ ....
T Consensus 120 s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~ 199 (297)
T 2pm7_B 120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (297)
T ss_dssp ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE
Confidence 468999999998764322222333455567788988631 11238999999999999998765 4556
Q ss_pred eccccccCCCCeEEEEEcCCC---CEEEEecCCCeEEEcC
Q psy17135 70 ITAHRKKFDESILDVAFHPSK---PFIASAGADGLAKVFV 106 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~---~~~~s~~~d~~i~iwd 106 (106)
+.+|. ..|.+++|+|++ .++++++.|++|++||
T Consensus 200 l~~H~----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 200 LEGHS----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp ECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ecCCC----CceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 77787 899999999984 7899999999999996
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.75 E-value=8.4e-18 Score=101.41 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=72.5
Q ss_pred cCCCceEEEEeCccC-------ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----cchheec
Q psy17135 3 KVPSSVIYIWTLLEL-------QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----TCVQEIT 71 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----~~~~~~~ 71 (106)
...|++|++||+... +.+..+ ..|...+..+.|+|.+.. |++++.|+.|++||++.. +++..+.
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~g~~---las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAWSNDGYY---LATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEE--C----CEEEEEECTTSCE---EEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEECCCCCE---EEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 356999999999542 222222 335556778999998877 899999999999999532 3456677
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|. ..|.+++|+|++.+|++++.|++|++||
T Consensus 151 ~h~----~~v~~v~~~p~~~~l~s~s~D~~i~iW~ 181 (330)
T 2hes_X 151 EHS----QDVKHVIWHPSEALLASSSYDDTVRIWK 181 (330)
T ss_dssp CCS----SCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred cCC----CceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 787 8999999999999999999999999995
No 39
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.75 E-value=9.1e-18 Score=99.94 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=74.7
Q ss_pred cCCCceEEEEeCccC--ceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheecccccc
Q psy17135 3 KVPSSVIYIWTLLEL--QTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~ 76 (106)
...|++|++||+.+. +.+..+. .|...+..+.|.+. +.. |++++.|++|++||+++++ .+..+..|.
T Consensus 27 ~s~D~~v~iw~~~~~~~~~~~~l~--gH~~~V~~v~~s~~~~g~~---l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-- 99 (297)
T 2pm7_B 27 CSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTI---LASCSYDGKVMIWKEENGRWSQIAVHAVHS-- 99 (297)
T ss_dssp EETTSCEEEEEBCSSCBCCCEEEC--CCSSCEEEEEECCGGGCSE---EEEEETTTEEEEEEBSSSCBCCCEEECCCS--
T ss_pred EeCCCEEEEEecCCCCcEEEEEEc--cccCCeEEEEecCCCcCCE---EEEEcCCCEEEEEEcCCCceEEEEEeecCC--
Confidence 457999999999754 3333333 35556677888764 444 8999999999999998874 455666777
Q ss_pred CCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|+ +..+++++.|++|++||
T Consensus 100 --~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd 129 (297)
T 2pm7_B 100 --ASVNSVQWAPHEYGPMLLVASSDGKVSVVE 129 (297)
T ss_dssp --SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred --CceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence 89999999997 88999999999999996
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.75 E-value=1.2e-17 Score=102.73 Aligned_cols=94 Identities=18% Similarity=0.291 Sum_probs=77.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchhee-------cccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-------TAHR 74 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-------~~~~ 74 (106)
...|++|++||+.+++....+.. ...+..+.++| .+.. +++++.|+.|++||+++++.+..+ .+|.
T Consensus 183 ~s~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~---l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 183 GSGDRTVRIWDLRTGQCSLTLSI---EDGVTTVAVSPGDGKY---IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSTTCCE---EEEEETTSCEEEEETTTCCEEEEEC------CCCS
T ss_pred ecCCCcEEEEECCCCeeEEEEEc---CCCcEEEEEECCCCCE---EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC
Confidence 45799999999999987555443 34466788888 4444 899999999999999998876665 3455
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|++|++||
T Consensus 257 ----~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 257 ----DSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp ----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ----CCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 8999999999999999999999999996
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=1.4e-17 Score=107.45 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=79.3
Q ss_pred cCCCceEEEEeCccCceeeecccC-----CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc----
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCP-----ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH---- 73 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~---- 73 (106)
...|++|++||+.+++.+..+... .|...+..+.|+|.+.. +++++.|++|++||+.+++++..+..+
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~---l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK---IASASADKTIKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE---EEEEeCCCeEEEEeCCCCceeeeecCCCCcc
Confidence 457999999999998876555321 35556777999998887 899999999999999987655433210
Q ss_pred -----------------------------------cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 -----------------------------------RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 -----------------------------------~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...|...|.+++|+|++..+++++.|++|++||
T Consensus 285 ~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 285 DQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 012337899999999999999999999999996
No 42
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.74 E-value=9.3e-18 Score=101.76 Aligned_cols=97 Identities=23% Similarity=0.384 Sum_probs=78.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~ 79 (106)
...|++|++||+.++..........|...+..+.|+|.+.. |++++.|+.|++||++++. ++..+..|. .
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~---l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~----~ 151 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL---LATCSRDKSVWVWEVDEEDEYECVSVLNSHT----Q 151 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE---EEEEETTSCEEEEEECTTSCEEEEEEECCCC----S
T ss_pred EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE---EEEEECCCeEEEEECCCCCCeEEEEEecCcC----C
Confidence 35689999999987653223333345666778999998877 8999999999999998763 355667777 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|.+++|+|++.++++++.|++|++||
T Consensus 152 ~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 152 DVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 999999999999999999999999996
No 43
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.74 E-value=1.5e-17 Score=99.98 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=77.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC---CceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN---ISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
...|++|++||++.. ++..+.. |...+..+.+.|... ....+++++.|+.|++||+++.+....+.+|. .
T Consensus 125 ~s~D~~i~vwd~~~~-~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~----~ 197 (319)
T 3frx_A 125 GSRDKTIKVWTIKGQ-CLATLLG--HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN----S 197 (319)
T ss_dssp EETTSCEEEEETTSC-EEEEECC--CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC----S
T ss_pred EeCCCeEEEEECCCC-eEEEEec--cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC----C
Confidence 457999999999743 4333332 444566678877543 22237999999999999999988888888888 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|.+++|+|++.++++++.|++|++||
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999996
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.74 E-value=2.4e-17 Score=99.38 Aligned_cols=95 Identities=21% Similarity=0.283 Sum_probs=81.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchhee---ccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEI---TAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~ 78 (106)
...||.|++||+.+++.+..+.. |...+..+.|+| .+.. +++++.|+.|++||+++++.+..+ ..|.
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---- 161 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNL---LLSVSKDHALRLWNIQTDTLVAIFGGVEGHR---- 161 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTE---EEEEETTSCEEEEETTTTEEEEEECSTTSCS----
T ss_pred ecCCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCE---EEEEeCCCeEEEEEeecCeEEEEeccccccc----
Confidence 35789999999999988666553 455677799999 5555 899999999999999999887777 5676
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..+++++.|+.+++||
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d 189 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWR 189 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEE
Confidence 8999999999999999999999999996
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.74 E-value=1.3e-17 Score=102.55 Aligned_cols=96 Identities=14% Similarity=0.243 Sum_probs=80.0
Q ss_pred cCCCceEEEEeCccCc-------eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee--ccc
Q psy17135 3 KVPSSVIYIWTLLELQ-------TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI--TAH 73 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~--~~~ 73 (106)
...|++|++||+.++. .+..+. .|...+..+.|+|.+... +++++.|+.|++||+++++++..+ ..|
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 175 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNV--LLSAGCDNVILVWDVGTGAAVLTLGPDVH 175 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTE--EEEEETTSCEEEEETTTTEEEEEECTTTC
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCE--EEEEcCCCEEEEEECCCCCccEEEecCCC
Confidence 3568999999999873 322332 245567779999987432 799999999999999999988888 677
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. ..|.+++|+|++..+++++.|+.|++||
T Consensus 176 ~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 176 P----DTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp C----SCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred C----CceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 7 8999999999999999999999999996
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.73 E-value=5.2e-17 Score=101.00 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=75.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..||+|+|||+.+++.........|...+.++.|+|..... |++++.|++|++||++++........+. ....+.+
T Consensus 139 s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~--l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~ 214 (435)
T 4e54_B 139 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQ--FYASSMEGTTRLQDFKGNILRVFASSDT--INIWFCS 214 (435)
T ss_dssp ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTE--EEEECSSSCEEEEETTSCEEEEEECCSS--CSCCCCC
T ss_pred eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCE--EEEEeCCCEEEEeeccCCceeEEeccCC--CCccEEE
Confidence 57999999999887654445554566778889999864433 8999999999999998654322222222 1146788
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.++++|+.|+.|++||
T Consensus 215 ~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 215 LDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp EEEETTTTEEEEECSSSBEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEeeec
Confidence 99999999999999999999996
No 47
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.73 E-value=4.7e-17 Score=100.76 Aligned_cols=92 Identities=11% Similarity=0.236 Sum_probs=81.4
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
|++|+|||+.+++....+....|...+.++.|+|.+.. +++|+.|+.|++||+.+++++..+.+|. ..+.+++
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~---lasgs~Dg~v~iWd~~~~~~~~~~~~h~----~~v~~~s 196 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNY---LAVGTSSAEVQLWDVQQQKRLRNMTSHS----ARVGSLS 196 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCE---EEEEECCCeEEEEEcCCCcEEEEEeCCC----CceEEEe
Confidence 78999999999998777777666666788999998887 8999999999999999999999999988 7888887
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
++ +..+++++.|+.+++||
T Consensus 197 ~~--~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 197 WN--SYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EE--TTEEEEEETTSEEEEEE
T ss_pred eC--CCEEEEEeCCCceeEee
Confidence 75 67899999999999985
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.73 E-value=2.3e-17 Score=98.99 Aligned_cols=100 Identities=13% Similarity=0.202 Sum_probs=74.3
Q ss_pred cCCCceEEEEeCccCcee-eecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCc---c-chheecccccc
Q psy17135 3 KVPSSVIYIWTLLELQTY-ARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNK---T-CVQEITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~---~-~~~~~~~~~~~ 76 (106)
...|++|++||+.+.... .......|...+..+.|+|.+.. ..++++++.|++|++|++++. . ....+..|.
T Consensus 185 gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-- 262 (316)
T 3bg1_A 185 GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN-- 262 (316)
T ss_dssp CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS--
T ss_pred ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC--
Confidence 456899999999755211 12233335566777999997621 122799999999999998763 1 233455566
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++..|++++.|++|++|+
T Consensus 263 --~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 263 --DVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp --SCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred --CcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 8999999999999999999999999995
No 49
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.73 E-value=8.5e-18 Score=112.54 Aligned_cols=96 Identities=7% Similarity=-0.032 Sum_probs=75.9
Q ss_pred cCCCceEEEEeCccCceee--ecc-------cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--------
Q psy17135 3 KVPSSVIYIWTLLELQTYA--RND-------CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-------- 65 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-------- 65 (106)
...|++|++||+.++.... .+. ...|...+.++.|+|.+.. |++|+.|++|++|++.+++
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~---LAsgs~DgtV~lwd~~~~~~~~~~~~~ 529 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLE---LAVSIETGDVVLFKYEVNQFYSVENRP 529 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTE---EEEEETTSCEEEEEEEECCC-------
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCe---EEEEecCcEEEEEEecCccccCccccC
Confidence 4579999999998875311 011 0134456778999999988 8999999999999987652
Q ss_pred -------------------------------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 -------------------------------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 -------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..+..|. ..|++++|+|+| +||+|+.|++|++||
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~----~~V~svafSpdG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 530 ESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK----GKTSAINNSNIG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp --------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS----CSEEEEEECBTS-EEEEEETTSEEEEEE
T ss_pred CCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC----CcEEEEEecCCc-EEEEEeCCCcEEEEE
Confidence 244556666 899999999999 999999999999997
No 50
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.73 E-value=5.1e-17 Score=99.97 Aligned_cols=95 Identities=16% Similarity=0.263 Sum_probs=79.3
Q ss_pred CCceEEEEeCccCceeeecccCC----------------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE----------------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ 68 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~ 68 (106)
.++++++|++.+++.+..+.... +...+.++.|+|.+.. +++++.|+.|++||+.+++.+.
T Consensus 83 ~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~---l~s~~~d~~i~iwd~~~~~~~~ 159 (393)
T 1erj_A 83 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF---LATGAEDRLIRIWDIENRKIVM 159 (393)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEE
T ss_pred cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE---EEEEcCCCeEEEEECCCCcEEE
Confidence 46789999999988765554321 0112456889998877 8999999999999999999888
Q ss_pred eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 69 EITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+|. ..|.+++|+|++..+++++.|++|++||
T Consensus 160 ~~~~h~----~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 160 ILQGHE----QDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp EECCCS----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEccCC----CCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 899898 8999999999999999999999999996
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.72 E-value=4.7e-17 Score=98.47 Aligned_cols=99 Identities=16% Similarity=0.293 Sum_probs=75.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC-------ceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI-------SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
...|++|++||+.............|...+.++.|.|.... ..++++++.|+.|++||. +.+....+..|.
T Consensus 136 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~- 213 (343)
T 2xzm_R 136 AGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE- 213 (343)
T ss_dssp EETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS-
T ss_pred EcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc-
Confidence 35789999999985443222222234455667888887521 123799999999999994 455666777887
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++.+|++++.|+.|++||
T Consensus 214 ---~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 214 ---SNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred ---ccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 8999999999999999999999999996
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.72 E-value=1.8e-17 Score=100.82 Aligned_cols=97 Identities=8% Similarity=0.005 Sum_probs=74.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~ 79 (106)
...|+.|++||+.++..........|...+..+.|+|.+.. +++++.|+.|++||+.++. ....+..|. .
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~---l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~----~ 101 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNR---IVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN----R 101 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCC---EEEEETTSSEEEC------CCCCEEECCCCS----S
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCE---EEEEeCCCeEEEEEcCCCCceeeeeEecccC----C
Confidence 45799999999998832113333345666778999998877 8999999999999999876 455666677 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.|.+++|+|++..+++++.|+.|++||
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd 128 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGARVISVCY 128 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSSCEEECC
T ss_pred ceEEEEECCCCCEEEEEecCCeEEEEE
Confidence 999999999999999999999999997
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.72 E-value=9.5e-17 Score=96.80 Aligned_cols=97 Identities=12% Similarity=0.162 Sum_probs=76.5
Q ss_pred cCCCceEEEEeCccCce--------------eeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135 3 KVPSSVIYIWTLLELQT--------------YARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
...|+.|++||+.+++. +..+.. +...+..+.|.|. +.. +++++.|+.|++||+.++++
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~---l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKM---LALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSE---EEEECTTSCEEEEECCSSSG
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcE---EEEEecCCcEEEEECCCCCC
Confidence 35699999999987654 222222 3455677888888 666 89999999999999998876
Q ss_pred hh----eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 67 VQ----EITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 ~~----~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.. .+..|. +...|.+++|+|++.++++++.|+.|++||
T Consensus 322 ~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 322 HKAKCTTLTHHK--CGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp GGCEEEEECCTT--CCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEcccc--cCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 54 565552 017999999999999999999999999996
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.71 E-value=1.1e-16 Score=99.53 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=76.6
Q ss_pred CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+...|++|++||++++..........+.....++.|+|.+.. +++|+.|+.|++||++ ++.+..+..|. ..|
T Consensus 182 s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~g~~dg~i~~wd~~-~~~~~~~~~h~----~~v 253 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM---VVTGDNVGNVILLNMD-GKELWNLRMHK----KKV 253 (435)
T ss_dssp EECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE---EEEECSSSBEEEEESS-SCBCCCSBCCS----SCE
T ss_pred EEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE---EEEEeCCCcEeeeccC-cceeEEEeccc----ceE
Confidence 346799999999987655333333223334566888888877 8999999999999986 45677788888 899
Q ss_pred EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
.+++|+|++. ++++++.|+.|++||
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEe
Confidence 9999999876 688999999999996
No 55
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.71 E-value=5.9e-17 Score=97.06 Aligned_cols=97 Identities=19% Similarity=0.196 Sum_probs=74.0
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-----ccC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-----KKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~ 77 (106)
...|++|++||+.+.+.+..+.. ...+..+.|.|.+ . +++++.|+.|++||++++..+..+..+. ..+
T Consensus 233 ~s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~-~---~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 233 GGKDGQAMLWDLNEGKHLYTLDG---GDIINALCFSPNR-Y---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAE 305 (340)
T ss_dssp EETTCEEEEEETTTTEEEEEEEC---SSCEEEEEECSSS-S---EEEEEETTEEEEEETTTTEEEEEECCC-------CC
T ss_pred EeCCCeEEEEEeccCceeeeecC---CceEEeeecCCCC-c---eeeccCCCEEEEEECCCCeEEEeccccceeeeccCC
Confidence 35789999999999988666554 3345567777754 3 5777789999999999876655443211 112
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...|.+++|+|++++|++|+.|+.|++||
T Consensus 306 ~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 306 PPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 27899999999999999999999999996
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.71 E-value=1.4e-16 Score=97.33 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=79.8
Q ss_pred ceEEEEeCccCceeeecccCC-----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec----
Q psy17135 7 SVIYIWTLLELQTYARNDCPE-----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---- 71 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---- 71 (106)
+.|++||+.+++.+..+.... |...+..+.|+|.+.. +++++.|+.|++||+++++++..+.
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 334 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET---LCSAGWDGKLRFWDVKTKERITTLNMHCD 334 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE---EEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE---EEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence 899999999998866655421 4555777999998877 8999999999999999999888887
Q ss_pred --cc---------------cccCCCCeEEEEEcCCC----------CEEEEecCCCeEEEcC
Q psy17135 72 --AH---------------RKKFDESILDVAFHPSK----------PFIASAGADGLAKVFV 106 (106)
Q Consensus 72 --~~---------------~~~~~~~v~~~~~~~~~----------~~~~s~~~d~~i~iwd 106 (106)
.| . ..|.+++|+|++ ..+++++.|+.|++|+
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~----~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 335 DIEIEEDILAVDEHGDSLAE----PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp GCSSGGGCCCBCTTSCBCSS----CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred cccchhhhhccccccccccC----CceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 66 5 899999999998 7999999999999996
No 57
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.8e-17 Score=102.63 Aligned_cols=96 Identities=7% Similarity=0.103 Sum_probs=80.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~ 82 (106)
..|+.|++||+++++.+..+....|...+.++.|+|.+.. +++++.|+.|++||+++++++..+. .|. ..|.
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~ 261 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV---LILGTTRGIIDIWDIRFNVLIRSWSFGDH----APIT 261 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE---EEEEETTSCEEEEETTTTEEEEEEBCTTC----EEEE
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE---EEEEcCCCeEEEEEcCCccEEEEEecCCC----CceE
Confidence 4689999999999998777766434556778999998777 8999999999999999998888775 555 6899
Q ss_pred EEEEc----CCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFH----PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~----~~~~~~~s~~~d~~i~iwd 106 (106)
+++++ |++.++++++.|+.|++||
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 99665 4677999999999999996
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.71 E-value=2e-17 Score=100.60 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=70.6
Q ss_pred cCCCceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheecc-ccccC
Q psy17135 3 KVPSSVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITA-HRKKF 77 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~ 77 (106)
...|++|++||+.+++ .........|...+..+.|+|.+.. +++++.|+.|++||+++++ ....+.. |.
T Consensus 73 ~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~--- 146 (377)
T 3dwl_C 73 CSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDK---FAVGSGARVISVCYFEQENDWWVSKHLKRPLR--- 146 (377)
T ss_dssp EETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSC---CEEEESSSCEEECCC-----CCCCEEECSSCC---
T ss_pred EeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCE---EEEEecCCeEEEEEECCcccceeeeEeecccC---
Confidence 3568999999999877 1112333335556777999998877 7999999999999999876 3666766 66
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++.++++++.|+.+++||
T Consensus 147 -~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 147 -STILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp -SCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred -CCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 8999999999999999999999999996
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.70 E-value=8.1e-17 Score=102.76 Aligned_cols=94 Identities=15% Similarity=0.225 Sum_probs=80.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee----------CCCCceEEEeeCCCCcEEEeeCCCc-cchheecc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP----------SSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITA 72 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~ 72 (106)
..|+.|++||+.+++.+..+... |...+..+.|+| .+.. +++++.|+.|++||+.++ +++..+.+
T Consensus 507 ~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~---l~~~~~dg~i~iw~~~~~~~~~~~~~~ 582 (615)
T 1pgu_A 507 DVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDL---VATGSLDTNIFIYSVKRPMKIIKALNA 582 (615)
T ss_dssp ETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCE---EEEEETTSCEEEEESSCTTCCEEETTS
T ss_pred CCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCE---EEEEcCCCcEEEEECCCCceechhhhc
Confidence 46899999999999985554431 455677799999 6666 899999999999999987 67888888
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|. ..|.+++|+|++. +++++.|+.|++|+
T Consensus 583 h~----~~v~~l~~s~~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 583 HK----DGVNNLLWETPST-LVSSGADACIKRWN 611 (615)
T ss_dssp ST----TCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred Cc----cceEEEEEcCCCC-eEEecCCceEEEEe
Confidence 88 8999999999999 99999999999996
No 60
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.70 E-value=3e-17 Score=102.56 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=76.0
Q ss_pred cCCCceEEEEeCccC--------ceeeec-ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135 3 KVPSSVIYIWTLLEL--------QTYARN-DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
...|++|++||+.++ +.+... ....|...+..+.|+|..... +++++.|++|++||++++..+.....|
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~--las~s~Dg~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM--VAVCLADGSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE--EEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE--EEEEECCCeEEEEEcCCCcceeeccCC
Confidence 456999999999765 111111 122245567779999984332 899999999999999988665555566
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. ..+.+++|+|++.+|++|+.|+.|++||
T Consensus 192 ~----~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 192 T----VAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp G----GCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred C----CceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 6 7999999999999999999999999997
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.70 E-value=1.9e-16 Score=97.37 Aligned_cols=97 Identities=18% Similarity=0.265 Sum_probs=77.4
Q ss_pred cCCCceEEEEeCccCceee-ec-ccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCc-------cchheecc
Q psy17135 3 KVPSSVIYIWTLLELQTYA-RN-DCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNK-------TCVQEITA 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~-------~~~~~~~~ 72 (106)
...||.|++||+....... .. ....|...+..+.|+| .+.. +++++.|+.|++||+.++ +++..+.+
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~---l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNV---IASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTE---EEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCE---EEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence 4679999999997643321 11 2233556677799999 5555 899999999999999987 55677778
Q ss_pred ccccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|. ..|.+++|+|++ ..+++++.|+.|++||
T Consensus 130 h~----~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 130 HT----KRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp CS----SCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CC----CeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 87 899999999997 6999999999999996
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.70 E-value=9.9e-17 Score=98.40 Aligned_cols=96 Identities=17% Similarity=0.262 Sum_probs=78.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC----ccchheeccccccCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN----KTCVQEITAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~ 79 (106)
..|+.|++||+.+++.........+...+..+.|+|.+.. +++++.|+.|++|++.+ .+.+..+..|. .
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~----~ 114 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKI---IAGALDNGSLELYSTNEANNAINSMARFSNHS----S 114 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSC---EEEEESSSCEEEECCSSTTSCCCEEEECCCSS----S
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCe---EEEEccCCeEEEeecccccccccchhhccCCc----c
Confidence 6789999999998764222222234556778999998887 89999999999999987 34677777787 8
Q ss_pred CeEEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPS-KPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~-~~~~~s~~~d~~i~iwd 106 (106)
.|.+++|+|+ +.++++++.|+.|++||
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 9999999998 88999999999999997
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.69 E-value=1.1e-16 Score=99.83 Aligned_cols=94 Identities=12% Similarity=0.223 Sum_probs=80.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...||+|++||+.+++.+..+.. |...+..+.|.|.+ . +++++.|+.|++||+++++++..+.+|. ..|.
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~-~---l~s~s~dg~i~vwd~~~~~~~~~~~~h~----~~v~ 207 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGG-I---LVSGSTDRTVRVWDIKKGCCTHVFEGHN----STVR 207 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSTT-E---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred EcCCCcEEEEECCCCcEEEEEeC--CCcCEEEEEEcCCC-E---EEEEeCCCCEEEEECCCCcEEEEECCCC----CccE
Confidence 45799999999999998666554 45567778887766 3 7999999999999999999998998888 8999
Q ss_pred EEEEc--CCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFH--PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~--~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+ +++..+++++.|+.+++||
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEEEecCCCCCEEEEEcCCCcEEEee
Confidence 99998 5778999999999999996
No 64
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2e-16 Score=93.72 Aligned_cols=93 Identities=19% Similarity=0.215 Sum_probs=79.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++.+..+.. |...+..+.|+|.+ . +++++.|+.|++||+++++++..+..|. ..+.
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~---l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~i~ 270 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNG-D---IVSCGEDRTVRIWSKENGSLKQVITLPA----ISIW 270 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTS-C---EEEEETTSEEEEECTTTCCEEEEEECSS----SCEE
T ss_pred ccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCC-C---EEEEecCCEEEEEECCCCceeEEEeccC----ceEE
Confidence 35789999999999998666654 45557778899977 4 6899999999999999999988888887 7999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++. +++++.|+.|++||
T Consensus 271 ~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 271 SVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEECTTSC-EEEEETTSCEEEEE
T ss_pred EEEEccCCC-EEEEeCCCcEEEEe
Confidence 999999998 66789999999996
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.69 E-value=2.6e-16 Score=93.99 Aligned_cols=96 Identities=18% Similarity=0.251 Sum_probs=79.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.........+...+..+.|.|.+.. +++++.|+.|++||+++++.+..+..|. ..+.+
T Consensus 116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~v~~~d~~~~~~~~~~~~~~----~~i~~ 188 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV---CFSCCSDGNIAVWDLHNQTLVRQFQGHT----DGASC 188 (337)
T ss_dssp ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCE---EEEEeCCCcEEEEeCCCCceeeeeeccc----CceEE
Confidence 4689999999998874333333334555667889997777 8999999999999999999888888887 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++..+++++.|+.+++||
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEE
T ss_pred EEECCCCCEEEEEecCCcEEEEE
Confidence 99999999999999999999996
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.69 E-value=2.2e-16 Score=103.81 Aligned_cols=94 Identities=23% Similarity=0.310 Sum_probs=83.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..||.|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||+.+++.+..+..|. ..|.+
T Consensus 32 ~~~g~v~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~---l~~~~~dg~i~vw~~~~~~~~~~~~~~~----~~v~~ 102 (814)
T 3mkq_A 32 LYSGRVEIWNYETQVEVRSIQV--TETPVRAGKFIARKNW---IIVGSDDFRIRVFNYNTGEKVVDFEAHP----DYIRS 102 (814)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEEE
T ss_pred eCCCEEEEEECCCCceEEEEec--CCCcEEEEEEeCCCCE---EEEEeCCCeEEEEECCCCcEEEEEecCC----CCEEE
Confidence 4689999999999988666654 4556778999998887 8999999999999999999888898888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++..+++++.|+.+++||
T Consensus 103 ~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 103 IAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEE
T ss_pred EEEeCCCCEEEEEcCCCEEEEEE
Confidence 99999999999999999999996
No 67
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.69 E-value=2e-16 Score=100.67 Aligned_cols=93 Identities=25% Similarity=0.330 Sum_probs=79.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|+|||. +++++..+.. |...+.++.|+|.+.. |++++.|+.|++||. +++++..+.+|. ..|.
T Consensus 34 ~~~d~~v~iWd~-~~~~~~~l~g--h~~~V~~l~fspdg~~---las~~~d~~i~vWd~-~~~~~~~~~~~~----~~v~ 102 (577)
T 2ymu_A 34 ASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDGQT---IASASDDKTVKLWNR-NGQLLQTLTGHS----SSVR 102 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEEC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEET-TSCEEEEECCCS----SCEE
T ss_pred EeCCCEEEEEEC-CCCEEEEEeC--CCCCEEEEEECCCCCE---EEEEeCCCEEEEEEC-CCCEEEEEECCC----CCEE
Confidence 357899999995 6777665554 4556777999998877 899999999999996 577788888888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|+.+++|+
T Consensus 103 ~~~~s~d~~~l~~~~~d~~~~~~~ 126 (577)
T 2ymu_A 103 GVAFSPDGQTIASASDDKTVKLWN 126 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEECCCCCEEEEEcCCCceeecc
Confidence 999999999999999999999985
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=95.39 Aligned_cols=95 Identities=13% Similarity=0.179 Sum_probs=77.1
Q ss_pred cCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...|+.|++||+.+ +..+. .....|...+..+.|+|.+.. +++++.|+.|++||+.+++.+. +..|. ..|
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~-~~~~~----~~v 130 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIP-KAQQMHTGPVLDVCWSDDGSK---VFTASCDKTAKMWDLSSNQAIQ-IAQHD----APV 130 (368)
T ss_dssp EETTSEEEEEEECTTSCEEE-EEEEECSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEE-EEECS----SCE
T ss_pred ECCCCcEEEEEcCCCCceeE-EEeccccCCEEEEEECcCCCE---EEEEcCCCcEEEEEcCCCCcee-ecccc----Cce
Confidence 35689999999997 44431 222234556778999998777 8999999999999999888665 44576 899
Q ss_pred EEEEE--cCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAF--HPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~--~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++| +|++..+++++.|+.|++||
T Consensus 131 ~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 131 KTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp EEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred EEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 99999 88999999999999999997
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.69 E-value=1.3e-16 Score=95.17 Aligned_cols=97 Identities=18% Similarity=0.255 Sum_probs=76.3
Q ss_pred cCCCceEEEEeCccCceee--ecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCc---------cchhe
Q psy17135 3 KVPSSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNK---------TCVQE 69 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~---------~~~~~ 69 (106)
...||.|++||+.++.... ......|...+..+.|+|. +.. +++++.|+.|++||++++ +.+..
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~---l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 105 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRI---IASASYDKTVKLWEEDPDQEECSGRRWNKLCT 105 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSE---EEEEETTSCEEEEEECTTSCTTSSCSEEEEEE
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCE---EEEEcCCCeEEEEecCCCcccccccCcceeee
Confidence 3568999999998764211 1222234556777899884 555 899999999999999876 34566
Q ss_pred eccccccCCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 70 ITAHRKKFDESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
+..|. ..+.+++|+|+ +..+++++.|+.|++||
T Consensus 106 ~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 106 LNDSK----GSLYSVKFAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp ECCCS----SCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred ecccC----CceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence 66777 89999999999 99999999999999996
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.68 E-value=2.7e-16 Score=102.55 Aligned_cols=99 Identities=19% Similarity=0.298 Sum_probs=79.2
Q ss_pred cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...|++|++||+.......... ...|...+.++.|+|.+... .+++++.|+.|++||++++++...+.+|. ..|
T Consensus 490 ~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~h~----~~v 564 (694)
T 3dm0_A 490 ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP-TIVSASWDKTVKVWNLSNCKLRSTLAGHT----GYV 564 (694)
T ss_dssp EETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC-EEEEEETTSCEEEEETTTCCEEEEECCCS----SCE
T ss_pred EeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc-eEEEEeCCCeEEEEECCCCcEEEEEcCCC----CCE
Confidence 4679999999987654322222 12244456678888876322 26999999999999999999888898888 899
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++|+|++.++++++.|+.|++||
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999999996
No 71
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.68 E-value=6.4e-16 Score=94.32 Aligned_cols=95 Identities=9% Similarity=0.053 Sum_probs=77.4
Q ss_pred cCCCceEEEEeCccCceeeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
...|+.|++||+.+... ..+... .+...+..+.|+|.+.. +++++.|+.|++||+ +++++..+..|. ..|
T Consensus 137 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~i~d~-~~~~~~~~~~h~----~~v 207 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVI-QVFAKTDSWDYWYCCVDVSVSRQM---LATGDSTGRLLLLGL-DGHEIFKEKLHK----AKV 207 (383)
T ss_dssp EETTTEEEEEETTSCEE-EEEECCCCSSCCEEEEEEETTTTE---EEEEETTSEEEEEET-TSCEEEEEECSS----SCE
T ss_pred EeCCCEEEEEECCCCce-EEEeccCCCCCCeEEEEECCCCCE---EEEECCCCCEEEEEC-CCCEEEEeccCC----CcE
Confidence 35789999999996433 333332 22345667899998877 899999999999999 577788888888 899
Q ss_pred EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
.+++|+|++. .+++++.|+.|++||
T Consensus 208 ~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 208 THAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 9999999998 899999999999996
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.5e-16 Score=94.62 Aligned_cols=97 Identities=9% Similarity=0.038 Sum_probs=74.3
Q ss_pred cCCCceEEEEeCc---------cCceeeecccCCCCCCCCeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 3 KVPSSVIYIWTLL---------ELQTYARNDCPELNSEPPACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 3 ~~~d~~i~iwd~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
...|++|++|+.. +++.+...... +...+..+.|+| .+.. +++++.|+.|++||+++++++....
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---l~s~s~dg~i~~wd~~~~~~~~~~~ 166 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVD-SANEIIYMYGHNEVNTEY---FIWADNRGTIGFQSYEDDSQYIVHS 166 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECC-CSSCEEEEECCC---CCE---EEEEETTCCEEEEESSSSCEEEEEC
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecC-CCCCEEEEEcCCCCCCCE---EEEEeCCCcEEEEECCCCcEEEEEe
Confidence 4678999999765 44433333332 234566788888 7766 8999999999999999988766554
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.. ..+.+++|+|++.++++|+.|+.|++||
T Consensus 167 ~~~~---~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 167 AKSD---VEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp CCSS---CCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred cCCC---CceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 4431 5799999999999999999999999997
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.68 E-value=1.4e-16 Score=97.31 Aligned_cols=97 Identities=14% Similarity=0.228 Sum_probs=82.1
Q ss_pred cCCCceEEEEeCccCceeeecccC-CC---CCCCCeeEeeeCCCCceEEEeeCCC---CcEEEeeCCCccchheecc---
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCP-EL---NSEPPACQTIPSSNISLFDSRPGHD---CSIRLWNLDNKTCVQEITA--- 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~s~~~d---~~v~iwd~~~~~~~~~~~~--- 72 (106)
...|+.|++||+.+++.+..+... .| ...+..+.|+|.+.. +++++.| +.|++||+++++++..+..
T Consensus 203 ~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~---l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 203 GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL---LAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE---EEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE---EEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 357899999999998886665541 13 445677899998777 8999999 9999999999998888887
Q ss_pred ----------ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 73 ----------HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ----------~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|. ..+.+++|+|++.++++++.|+.|++||
T Consensus 280 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 280 SSQASLGEFAHS----SWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp ------CCBSBS----SCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred cccccccccccC----CcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 76 8999999999999999999999999996
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2e-16 Score=100.87 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=72.8
Q ss_pred cCCCceEEEEeCccCceee---------ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheecc
Q psy17135 3 KVPSSVIYIWTLLELQTYA---------RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITA 72 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~ 72 (106)
...||+|++||+.++.... ......|...+.++.|++. .. |++|+.||+|++||++++. +...+..
T Consensus 231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~---lasgs~DgtV~lWD~~~~~~~~~~~~~ 306 (524)
T 2j04_B 231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT---VVCGFKNGFVAEFDLTDPEVPSFYDQV 306 (524)
T ss_dssp EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE---EEEEETTSEEEEEETTBCSSCSEEEEC
T ss_pred EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce---EEEEeCCCEEEEEECCCCCCceEEeec
Confidence 3468999999998764310 0122224455667888874 33 7999999999999999764 4455778
Q ss_pred ccccCCCCeEEE--EEcCCC-CEEEEecCCCeEEEcC
Q psy17135 73 HRKKFDESILDV--AFHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~--~~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|. ..|.++ .|+|++ .+|+|++.|++|++||
T Consensus 307 H~----~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 307 HD----SYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp SS----SCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred cc----ccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 87 899999 568887 8899999999999997
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.68 E-value=3.3e-16 Score=99.99 Aligned_cols=93 Identities=16% Similarity=0.234 Sum_probs=80.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc-ccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA-HRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~v~~~ 84 (106)
|+.|++||+.+++... .....|...+..+.|+|.+.. +++++.|+.|++||+.+++++..+.. |. ..|.++
T Consensus 466 d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~---l~~~~~dg~i~iw~~~~~~~~~~~~~~h~----~~v~~~ 537 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETY---IAAGDVMGKILLYDLQSREVKTSRWAFRT----SKINAI 537 (615)
T ss_dssp TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEECCSCCCS----SCEEEE
T ss_pred CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCE---EEEcCCCCeEEEeeCCCCcceeEeecCCC----CceeEE
Confidence 8999999999877642 334445566777999998887 89999999999999999998888877 77 899999
Q ss_pred EEcC----------CCCEEEEecCCCeEEEcC
Q psy17135 85 AFHP----------SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~----------~~~~~~s~~~d~~i~iwd 106 (106)
+|+| ++.++++++.|+.|++||
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 9999 999999999999999996
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.7e-16 Score=95.21 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=76.4
Q ss_pred CCCceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccC
Q psy17135 4 VPSSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~ 77 (106)
..|+.|++||+. +++.+..+ ..|...+..+.|.+. +.. +++++.|+.|++||+.+++ .+..+..|.
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--- 101 (379)
T 3jrp_A 30 SSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTI---LASCSYDGKVLIWKEENGRWSQIAVHAVHS--- 101 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSE---EEEEETTSCEEEEEEETTEEEEEEEECCCS---
T ss_pred ECCCcEEEEecCCCcceeeeEe--cCCCCcEEEEEeCCCCCCCE---EEEeccCCEEEEEEcCCCceeEeeeecCCC---
Confidence 468999999998 44443333 334556677888876 555 8999999999999999886 666777777
Q ss_pred CCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
..+.+++|+|+ +..+++++.|+.|++||
T Consensus 102 -~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 102 -ASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp -SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred -cceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 89999999998 99999999999999996
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.67 E-value=7.4e-16 Score=95.35 Aligned_cols=98 Identities=20% Similarity=0.211 Sum_probs=74.9
Q ss_pred CCceEEEEeCcc-Cceeeec-----ccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCccc----hheeccc
Q psy17135 5 PSSVIYIWTLLE-LQTYARN-----DCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKTC----VQEITAH 73 (106)
Q Consensus 5 ~d~~i~iwd~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~~----~~~~~~~ 73 (106)
.|++|++||+.+ ++.+..+ ....|...+.++.|+|.+ .. +++++.|+.|++||+++++. +..+..|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT---FVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE---EEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE---EEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 699999999984 4333321 233355567789999987 55 89999999999999998876 5667666
Q ss_pred cc--------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RK--------KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~--------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.. .+...|.+++|+|++.++++++. +.|++||
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD 312 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence 51 00028999999999999999998 9999996
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.5e-16 Score=96.60 Aligned_cols=91 Identities=18% Similarity=0.246 Sum_probs=76.2
Q ss_pred eEEEEeCccC-ceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 8 VIYIWTLLEL-QTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 8 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.|++||++++ ..+..+.. .|...+..+.|+| .+.. +++++.|+.|++||+++++++..+..|. ..+.+++
T Consensus 241 ~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~---l~s~~~dg~v~~wd~~~~~~~~~~~~~~----~~v~~~~ 312 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHL---LLSSGRDNTVLLWNPESAEQLSQFPARG----NWCFKTK 312 (416)
T ss_dssp CCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSC---EEEEESSSEEEEECSSSCCEEEEEECSS----SCCCCEE
T ss_pred eEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCe---EEEEeCCCCEEEeeCCCCccceeecCCC----CceEEEE
Confidence 9999999986 33222220 2455677799999 5666 8999999999999999999999998888 8999999
Q ss_pred EcCCC-CEEEEecCCCeEEEcC
Q psy17135 86 FHPSK-PFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~-~~~~s~~~d~~i~iwd 106 (106)
|+|++ .++++++.|+.|++||
T Consensus 313 ~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 313 FAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp ECTTCTTEEEECCSSSEEEEEE
T ss_pred ECCCCCCEEEEEecCCcEEEEE
Confidence 99998 8999999999999996
No 79
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.66 E-value=4.8e-16 Score=92.79 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=76.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCc------------------
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNK------------------ 64 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~------------------ 64 (106)
..|+.+.+|+...++.........|...+..+.|+|.+.. ..++++++.|+.|++||++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 268 (351)
T 3f3f_A 189 ALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDN 268 (351)
T ss_dssp ETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------
T ss_pred cCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCC
Confidence 3577888888877765334444445666778999998721 122799999999999999864
Q ss_pred ----------------------------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 65 ----------------------------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 65 ----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+..+.+|. ..|.+++|+|++.+|++++.|+.|++||
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 269 SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN----GEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp ----------------------CCSEEEEEEEEECTTS----SCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred CcccccccccccccccceeeeecccccccEEEEEeccc----ccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 3445556666 8999999999999999999999999996
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.66 E-value=1.8e-15 Score=90.64 Aligned_cols=97 Identities=22% Similarity=0.310 Sum_probs=77.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.+++||+........ ....+...+..+.+.+...... +++++.|+.|++||+++++++..+.+|. ..|.+
T Consensus 147 s~d~~~~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~-~~s~~~d~~i~i~d~~~~~~~~~~~~h~----~~v~~ 220 (340)
T 4aow_A 147 SRDKTIKLWNTLGVCKYTV-QDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCKLKTNHIGHT----GYLNT 220 (340)
T ss_dssp ETTSCEEEECTTSCEEEEE-CSSSCSSCEEEEEECSCSSSCE-EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred cCCCeEEEEEeCCCceEEE-EeccccCcccceEEccCCCCcE-EEEEcCCCEEEEEECCCCceeeEecCCC----CcEEE
Confidence 4689999999987655322 2222344455567776654432 5899999999999999999988898888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.++++++.|+.|++||
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999996
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=5.1e-16 Score=93.97 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=77.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC-------------CCCceEEEeeCCCCcEEEeeCCCcc----c
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS-------------SNISLFDSRPGHDCSIRLWNLDNKT----C 66 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~~~d~~v~iwd~~~~~----~ 66 (106)
..|+.|++||+.++..........+...+..+.|.|. +.. +++++.|+.|++||++++. .
T Consensus 122 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~ 198 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK---FVTGGADNLVKIWKYNSDAQTYVL 198 (379)
T ss_dssp ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCE---EEEEETTSCEEEEEEETTTTEEEE
T ss_pred cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE---EEEEeCCCeEEEEEecCCCcceee
Confidence 5689999999998755444444445556777899984 444 8999999999999998764 3
Q ss_pred hheeccccccCCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135 67 VQEITAHRKKFDESILDVAFHPS---KPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd 106 (106)
...+..|. ..|.+++|+|+ +.++++++.|+.|++||
T Consensus 199 ~~~~~~h~----~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 199 ESTLEGHS----DWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp EEEECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred EEEEeccc----CcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 34566677 89999999999 89999999999999996
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.66 E-value=9.8e-16 Score=95.49 Aligned_cols=92 Identities=15% Similarity=0.233 Sum_probs=80.4
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.+..+.. |...+..+.|.|.+.. +++++.|+.|++||+++++++..+.+|. ..+.+
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~~ 357 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSG--HTDRIYSTIYDHERKR---CISASMDTTIRIWDLENGELMYTLQGHT----ALVGL 357 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTTTE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred eCCCeEEEEECCCCcEEEEecC--CCCCEEEEEEcCCCCE---EEEEeCCCcEEEEECCCCcEEEEEeCCC----CcEEE
Confidence 4689999999999998666544 4555777899998877 8999999999999999999999999888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|+ +..+++++.|+.+++||
T Consensus 358 ~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 358 LRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp EEEC--SSEEEEEETTSEEEEEE
T ss_pred EEEc--CCEEEEEeCCCcEEEEE
Confidence 9997 57899999999999996
No 83
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.5e-15 Score=97.34 Aligned_cols=95 Identities=5% Similarity=0.024 Sum_probs=72.2
Q ss_pred CCCceEEEEeCccCceeeecccCCC---CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-------hheeccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPEL---NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-------VQEITAH 73 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-------~~~~~~~ 73 (106)
..||.|++||.++ ++..+. ++. ...+.++.|+|.+.. +++|+.||+|++||+.++.. +.++..+
T Consensus 104 s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~---LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~ 177 (588)
T 2j04_A 104 SNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS---IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS 177 (588)
T ss_dssp ETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC---EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS
T ss_pred eCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE---EEEEcCCCEEEEEECCCCccccccceeeeeeecc
Confidence 5789999999654 433333 211 124667999999998 99999999999999998753 4555333
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...|...|.+++|+|++ +++++.|+++++||
T Consensus 178 ~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 178 DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp CTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred cccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 32233899999999999 88888999999997
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.8e-15 Score=91.24 Aligned_cols=93 Identities=15% Similarity=0.197 Sum_probs=81.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--------------cEEEeeCCCccchhe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--------------SIRLWNLDNKTCVQE 69 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--------------~v~iwd~~~~~~~~~ 69 (106)
..|+.|++||+.+++.+..+.. ......+.|.|.+.. +++++.++ .+++||..+++.+..
T Consensus 237 ~~d~~i~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVLKKYET---DCPLNTAVITPLKEF---IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSE---EEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred cCCceEEEEECCCCceeeeecC---CCCceeEEecCCCce---EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 4689999999999988666653 445677889998887 77887777 899999999999999
Q ss_pred eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+..|. ..|.+++|+|++.++++++.|+.|++|+
T Consensus 311 ~~~~~----~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 311 VQGHF----GPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EECCS----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeccc----CcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 98888 8999999999999999999999999996
No 85
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.65 E-value=4.2e-16 Score=95.87 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=74.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
..|+.|++||+.+++....... . .... ..+.+.+.. +++++.|+.|++||+.+++....+..|. ..|.
T Consensus 75 ~~d~~v~i~d~~~~~~~~~~~~---~-~~~~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~h~----~~v~ 143 (420)
T 3vl1_A 75 RLDGHDFLFNTIIRDGSKMLKR---A-DYTAVDTAKLQMRR---FILGTTEGDIKVLDSNFNLQREIDQAHV----SEIT 143 (420)
T ss_dssp EETTEEEEEECCSEETTTTSCS---C-CEEEEEEECSSSCE---EEEEETTSCEEEECTTSCEEEEETTSSS----SCEE
T ss_pred EcCCcEEEEEecccceeeEEec---C-CceEEEEEecCCCE---EEEEECCCCEEEEeCCCcceeeeccccc----CccE
Confidence 4589999999988776333222 2 2333 455666666 8999999999999999988887777888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++.++++++.|+.|++||
T Consensus 144 ~~~~~~~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQDMQLKIWS 167 (420)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999999996
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.65 E-value=9.1e-16 Score=95.37 Aligned_cols=96 Identities=22% Similarity=0.358 Sum_probs=78.2
Q ss_pred cCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~ 78 (106)
...|+.|++||++++. .+..+. .|...+..+.|+|.+... +++++.|+.|++||+++ +.++..+..|.
T Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~~--l~tg~~dg~v~vwd~~~~~~~~~~~~~h~---- 321 (430)
T 2xyi_A 250 VADDQKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFI--LATGSADKTVALWDLRNLKLKLHSFESHK---- 321 (430)
T ss_dssp EETTSEEEEEETTCSCSSSCSEEEE--CCSSCEEEEEECSSCTTE--EEEEETTSEEEEEETTCTTSCSEEEECCS----
T ss_pred EeCCCeEEEEECCCCCCCcceeEee--cCCCCeEEEEeCCCCCCE--EEEEeCCCeEEEEeCCCCCCCeEEeecCC----
Confidence 3578999999999873 322332 345567789999988754 78999999999999998 56678888887
Q ss_pred CCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|++. ++++++.|+.|++||
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 8999999999885 699999999999996
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.65 E-value=5.3e-16 Score=93.35 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=77.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC---CCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS---NISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~ 80 (106)
.|+.|++||+.+++........ |...+.++.|+|.. .. +++++.|+.|++||+.+++ ++..+..|. ..
T Consensus 42 ~d~~v~iw~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~ 113 (357)
T 3i2n_A 42 GTGVIQLYEIQHGDLKLLREIE-KAKPIKCGTFGATSLQQRY---LATGDFGGNLHIWNLEAPEMPVYSVKGHK----EI 113 (357)
T ss_dssp CCEEEEEEEECSSSEEEEEEEE-ESSCEEEEECTTCCTTTCC---EEEEETTSCEEEECTTSCSSCSEEECCCS----SC
T ss_pred CCcEEEEEeCCCCcccceeeec-ccCcEEEEEEcCCCCCCce---EEEecCCCeEEEEeCCCCCccEEEEEecc----cc
Confidence 4899999999998864443332 34557779999984 55 8999999999999999887 788888888 89
Q ss_pred eEEEEE------cCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAF------HPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~------~~~~~~~~s~~~d~~i~iwd 106 (106)
|.++.| +|++..+++++.|+.+++||
T Consensus 114 v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 114 INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp EEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred eEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 999954 68899999999999999997
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.3e-16 Score=95.96 Aligned_cols=95 Identities=12% Similarity=0.061 Sum_probs=80.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-----------------
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT----------------- 65 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~----------------- 65 (106)
...|+.|++||+.+++.+..+.. +...+..+.|+|.+.. +++++.|+.|++||+.+++
T Consensus 306 ~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~s~~~~~---l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 306 CSMDGSVRLWSLKQNTLLALSIV--DGVPIFAGRISQDGQK---YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC--TTCCEEEEEECTTSSE---EEEEETTSCEEEEECHHHHC--------------CE
T ss_pred EeCCCcEEEEECCCCcEeEeccc--CCccEEEEEEcCCCCE---EEEEECCCeEEEEECCCCccceeeeecccccccCcc
Confidence 35689999999999988665554 3445677889998777 8999999999999999877
Q ss_pred ---chheeccccccCCC--CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 ---CVQEITAHRKKFDE--SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ---~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++..+..|. . .|.+++|+|++.+|++++.|+.|++||
T Consensus 381 ~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 381 PIPLYASYQSSQ----DNDYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp ECCEEEEECCTT----CCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred cchhhhhhcCcc----cCCceEEEEccCCCceEEEEecCceEEEEe
Confidence 777787776 4 999999999999999999999999996
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.65 E-value=1e-15 Score=93.42 Aligned_cols=93 Identities=13% Similarity=0.300 Sum_probs=75.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC----ccchheeccccccCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN----KTCVQEITAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~ 79 (106)
..|+.|++||+ +++.+..+.. |...+..+.|+|.+... +++++.|+.|++||+++ +.++..+ .|. .
T Consensus 182 ~~d~~i~i~d~-~~~~~~~~~~--h~~~v~~~~~~~~~~~~--l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~----~ 251 (383)
T 3ei3_B 182 DSTGRLLLLGL-DGHEIFKEKL--HKAKVTHAEFNPRCDWL--MATSSVDATVKLWDLRNIKDKNSYIAEM-PHE----K 251 (383)
T ss_dssp ETTSEEEEEET-TSCEEEEEEC--SSSCEEEEEECSSCTTE--EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECS----S
T ss_pred CCCCCEEEEEC-CCCEEEEecc--CCCcEEEEEECCCCCCE--EEEEeCCCEEEEEeCCCCCcccceEEEe-cCC----C
Confidence 46899999999 4666444443 45567789999988832 79999999999999987 4444444 466 8
Q ss_pred CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.+.+++|+| ++..+++++.|+.+++||
T Consensus 252 ~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 252 PVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp CEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred ceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 999999999 999999999999999996
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.65 E-value=1.2e-15 Score=104.21 Aligned_cols=97 Identities=22% Similarity=0.386 Sum_probs=82.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++.+..+.. |...+.++.|.|.+... ++++++.|+.|++||+.+++++..+.+|. ..|.
T Consensus 675 ~~~d~~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~h~----~~v~ 747 (1249)
T 3sfz_A 675 CSADKKVKIWDSATGKLVHTYDE--HSEQVNCCHFTNKSNHL-LLATGSNDFFLKLWDLNQKECRNTMFGHT----NSVN 747 (1249)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSCC-EEEEEETTSCEEEEETTSSSEEEEECCCS----SCEE
T ss_pred EeCCCeEEEEECCCCceEEEEcC--CCCcEEEEEEecCCCce-EEEEEeCCCeEEEEECCCcchhheecCCC----CCEE
Confidence 35789999999999998666654 45556778888854432 26899999999999999999998998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|+|++..+++++.|+.|++||
T Consensus 748 ~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 748 HCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp EEEECSSTTEEEEEESSSEEEEEE
T ss_pred EEEEecCCCEEEEEECCCeEEEEe
Confidence 999999999999999999999996
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=92.15 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=82.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++....+.. ......+.+.+.+....++++++.++.+++||+++++.+..+..|. ..|.
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~v~ 190 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR----QEIL 190 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC----SCEE
T ss_pred EeCCCeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC----CcEE
Confidence 34689999999999988666553 3446678888877655558999999999999999999888888888 8999
Q ss_pred EEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
+++|+|++. .+++++.|+.+++||
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEE
Confidence 999999988 589999999999996
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.3e-15 Score=93.25 Aligned_cols=93 Identities=16% Similarity=0.094 Sum_probs=80.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.+..+.. +...+..+.|.|.+ . +++++.|+.+++||+++++.+..+..|. ..+.+
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~i~~ 335 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-K---VISCSMDGSVRLWSLKQNTLLALSIVDG----VPIFA 335 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-E---EEEEETTSEEEEEETTTTEEEEEEECTT----CCEEE
T ss_pred cCCCEEEEEECCCCccceEecC--CCccEEEEEECCCC-E---EEEEeCCCcEEEEECCCCcEeEecccCC----ccEEE
Confidence 4689999999999887555543 35556778899877 4 7999999999999999999888888887 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+|++.++++++.|+.|++||
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCEEEEEECCCeEEEEE
Confidence 99999999999999999999996
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.64 E-value=1.6e-15 Score=90.98 Aligned_cols=100 Identities=15% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCc------cchheeccccc
Q psy17135 4 VPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNK------TCVQEITAHRK 75 (106)
Q Consensus 4 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~------~~~~~~~~~~~ 75 (106)
..|+.|++||+.+ +..........+...+..+.|.| .+.. +++++.|+.+++|+++.. +....+..|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~---l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG---YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE---EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE---EEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 4688999999998 55422222222344566788998 7776 899999999999999876 66677777651
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 -----KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 -----~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+...+.+++|+|++.++++++.|+.|++||
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 0113899999999999999999999999996
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.2e-15 Score=90.85 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=80.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++.+..+.. |...+..+.|+|.+.. +++++.|+.|++||+.+++++..+. +. ..+.+
T Consensus 51 ~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~-~~----~~v~~ 120 (369)
T 3zwl_B 51 SKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKY---CVTGSADYSIKLWDVSNGQCVATWK-SP----VPVKR 120 (369)
T ss_dssp ESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTTEEEEEETTTCCEEEEEE-CS----SCEEE
T ss_pred eCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCE---EEEEeCCCeEEEEECCCCcEEEEee-cC----CCeEE
Confidence 4689999999999998665554 4556777999998777 8999999999999999998888777 55 78999
Q ss_pred EEEcCCCCEEEEecCC-----CeEEEcC
Q psy17135 84 VAFHPSKPFIASAGAD-----GLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d-----~~i~iwd 106 (106)
++|+|++..+++++.+ +.+++||
T Consensus 121 ~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp EEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred EEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 9999999999999998 9999996
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.64 E-value=8.4e-16 Score=92.49 Aligned_cols=93 Identities=12% Similarity=0.185 Sum_probs=77.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee---CCCCceEEEeeCCCCcEEEeeCCCccchheec-----cccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP---SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-----AHRK 75 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~ 75 (106)
..|+.|++||+++++...... +...+..+.|.| .+.. +++++.|+.|++||+++++....+. .|.
T Consensus 187 ~~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~- 259 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMALRWETN---IKNGVCSLEFDRKDISMNK---LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK- 259 (357)
T ss_dssp ETTSEEEEEETTTTEEEEEEE---CSSCEEEEEESCSSSSCCE---EEEEESTTEEEEEEEEEEETTTEEEEEEEECCS-
T ss_pred ccCCeEEEEECccCceeeecC---CCCceEEEEcCCCCCCCCE---EEEECCCCeEEEEeCcCCCcccceeeeccCCCc-
Confidence 468999999999988733322 244577789999 5555 8999999999999999888777665 676
Q ss_pred cCCCCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
..+.+++|+|++. ++++++.|+.|++||
T Consensus 260 ---~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 260 ---STVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp ---SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred ---CCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 8999999999998 799999999999996
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2e-15 Score=101.25 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=77.8
Q ss_pred CCCceEEEEeCccCceeee---------cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135 4 VPSSVIYIWTLLELQTYAR---------NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
..||+|++||+.+++.... .....|...+.++.|+|.+... +++++.|+.| +||+++++++..+..|.
T Consensus 117 s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~--l~~g~~dg~v-lWd~~~~~~~~~~~~~~ 193 (902)
T 2oaj_A 117 LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT--VLISYEYVTL-TYSLVENEIKQSFIYEL 193 (902)
T ss_dssp ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE--EEEECSSCEE-EEETTTTEEEEEECCCB
T ss_pred cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE--EEEEeCCCcE-EEECCCCceEEEEeccc
Confidence 4689999999998875311 1223356678889999965332 7899999999 99999998877776551
Q ss_pred --------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 --------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 --------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|...|.+++|+|++.+|++++.|++|++||
T Consensus 194 ~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 194 PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 01126799999999999999999999999996
No 97
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.64 E-value=1.4e-15 Score=92.07 Aligned_cols=97 Identities=15% Similarity=0.232 Sum_probs=78.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hhee-ccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEI-TAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~-~~~~~~~~ 78 (106)
...|+.|++||+.+++.........+...+..+.|+|.+.. +++++.|+.+++||++.+.. ...+ ..|.
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~---- 142 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK---FAVGSGSRVISICYFEQENDWWVCKHIKKPIR---- 142 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE---EEEEETTSSEEEEEEETTTTEEEEEEECTTCC----
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE---EEEEeCCCEEEEEEecCCCcceeeeeeecccC----
Confidence 34689999999998876555544445556777999998876 89999999999999988763 2233 3455
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+.+++|+|++..+++++.|+.+++||
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 7999999999999999999999999996
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.64 E-value=1.2e-15 Score=104.20 Aligned_cols=95 Identities=12% Similarity=0.167 Sum_probs=83.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...||+|++||+.+++.+..+.. |...+.++.|+|.+.. +++++.|+.|++||+.+++++..+..|. ..|.
T Consensus 633 ~~~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~---l~s~~~d~~v~vwd~~~~~~~~~~~~~~----~~v~ 703 (1249)
T 3sfz_A 633 CGADKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSDDSY---IATCSADKKVKIWDSATGKLVHTYDEHS----EQVN 703 (1249)
T ss_dssp EETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred EeCCCeEEEEECCCCCEEEEecc--CCCCEEEEEEecCCCE---EEEEeCCCeEEEEECCCCceEEEEcCCC----CcEE
Confidence 35789999999999998666553 4566778999998877 8999999999999999999999999888 8999
Q ss_pred EEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHP--SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~--~~~~~~s~~~d~~i~iwd 106 (106)
+++|+| ++..+++++.|+.|++||
T Consensus 704 ~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 704 CCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EEEEecCCCceEEEEEeCCCeEEEEE
Confidence 999999 556899999999999996
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=6.4e-16 Score=96.41 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=80.4
Q ss_pred cCCCceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh----eecccccc
Q psy17135 3 KVPSSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ----EITAHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~----~~~~~~~~ 76 (106)
...|+.|++||+. +++.+..+....+...+..+.|+|.+.. +++++.++.+++|++.++.... .+.+|.
T Consensus 121 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~---l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~-- 195 (450)
T 2vdu_B 121 ADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT---VIIADKFGDVYSIDINSIPEEKFTQEPILGHV-- 195 (450)
T ss_dssp EGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE---EEEEETTSEEEEEETTSCCCSSCCCCCSEECS--
T ss_pred ECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE---EEEEeCCCcEEEEecCCcccccccceeeeccc--
Confidence 3468999999999 7877666554333455677999998877 8999999999999998876554 677777
Q ss_pred CCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135 77 FDESILDVAFHPS---KPFIASAGADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|+ +.++++++.|+.|++||
T Consensus 196 --~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 196 --SMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp --SCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred --CceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 89999999999 99999999999999996
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.63 E-value=4e-15 Score=90.80 Aligned_cols=95 Identities=15% Similarity=0.246 Sum_probs=76.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chhee------------
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEI------------ 70 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~------------ 70 (106)
..|+.|++||+.+++.+..+.. |...+..+.|.|.+... +++++.|+.|++||++++. ++..+
T Consensus 163 ~~~~~v~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l--l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 163 TRGPKVQLCDLKSGSCSHILQG--HRQEILAVSWSPRYDYI--LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp ESSSSEEEEESSSSCCCEEECC--CCSCEEEEEECSSCTTE--EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred cCCCeEEEEeCCCcceeeeecC--CCCcEEEEEECCCCCcE--EEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 4689999999999887555543 45567779999988753 6899999999999998765 33333
Q ss_pred ---ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 71 ---TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 71 ---~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|. ..|.+++|+|++.++++++.|+.+++||
T Consensus 239 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 239 SANTAHN----GKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp TSSCSCS----SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccccccc----CceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 3344 7899999999999999999999999996
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.63 E-value=2.3e-15 Score=92.68 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=76.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCccchh--eeccccccCCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKTCVQ--EITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~ 80 (106)
.|+.|++||+.+++.+..+.. ...+..+.|+|.+.. +++ |+.|+.|++||+.+++... .+.+|. ..
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~---l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~----~~ 351 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPHSKE---IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD----TR 351 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSE---EEEEECTTTCEEEEEEEETTEEEEEEEEECCS----SC
T ss_pred CCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCCCCe---EEEEeecCCCcEEEEecCCccceeEEEecCCC----CC
Confidence 599999999999998666643 345777999998887 566 6689999999999865443 355677 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
|.+++|+|++.++++++.|+.|++|+
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 99999999999999999999999996
No 102
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.63 E-value=2.1e-15 Score=91.23 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=76.9
Q ss_pred CCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee--ccccccCCC
Q psy17135 4 VPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI--TAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~ 79 (106)
..|+.|++||+.+++ .+..+. .|...+..+.|.|.+.. +++++.|+.|++||+.+++....+ ..|. .
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~---l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----~ 97 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNR---IVTCGTDRNAYVWTLKGRTWKPTLVILRIN----R 97 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTE---EEEEETTSCEEEEEEETTEEEEEEECCCCS----S
T ss_pred eCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCE---EEEEcCCCeEEEEECCCCeeeeeEEeecCC----C
Confidence 468999999999887 544443 34556777999998777 899999999999999887644333 4455 7
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+++|+|++..+++++.|+.+++||
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSRVISICY 124 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred ceeEEEECCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999999996
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.3e-15 Score=100.38 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=77.4
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD 78 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~ 78 (106)
...||+|++||+.++..........|...+.++.|+|. +.. +++++.||.|++||+.+++ .+..+..|.
T Consensus 27 g~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~---l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~---- 99 (753)
T 3jro_A 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTI---LASCSYDGKVLIWKEENGRWSQIAVHAVHS---- 99 (753)
T ss_dssp EETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSE---EEEEETTSCEEEEEEETTEEEEEEEECCCS----
T ss_pred EECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCE---EEEEeCCCeEEEEECCCCcccccccccCCC----
Confidence 35699999999984332223333335556777888887 555 8999999999999999886 566777777
Q ss_pred CCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPS--KPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~--~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+|+ +..+++++.|+.|++||
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 89999999998 99999999999999996
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.62 E-value=1.7e-15 Score=93.71 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=58.8
Q ss_pred CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchh-------eeccccccCCCCeEEEEEcCCC-CEEEEecC
Q psy17135 28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQ-------EITAHRKKFDESILDVAFHPSK-PFIASAGA 98 (106)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~ 98 (106)
|...+..+.|+|.+.. ++++ .|+.|++||+++ ++.+. .+..|. ..|.+++|+|++ ..+++++.
T Consensus 176 h~~~v~~~~~~~~~~~---l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 176 HTYHINSISINSDYET---YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT----EVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp CSSCCCEEEECTTSSE---EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC----CCEEEEEECSSCTTEEEEEET
T ss_pred CCcceEEEEEcCCCCE---EEEe-CCCeEEEEECCCCCceeeeeecccccccccC----cceEEEEECCCCCcEEEEEeC
Confidence 5566788999998776 7888 799999999984 44444 244566 899999999998 89999999
Q ss_pred CCeEEEcC
Q psy17135 99 DGLAKVFV 106 (106)
Q Consensus 99 d~~i~iwd 106 (106)
|+.|++||
T Consensus 248 dg~i~iwd 255 (447)
T 3dw8_B 248 KGTIRLCD 255 (447)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 99999996
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.62 E-value=8.5e-16 Score=94.65 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=72.6
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc--------
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-------- 74 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-------- 74 (106)
...|++|+|||+.++.+...... ++..+.++.|+|.+... +++++.|++|++||+++++.......+.
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~--l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYP--LSSPGISVQFRPSNPNQ--LIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEE--CSSCEEEEEEETTEEEE--EEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EECCCeEEEEECCCCceeeeecC--CCCCcEEEEECCCCCce--EEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 35799999999988877444433 35567789999987543 7999999999999999876533221110
Q ss_pred -------------ccCCCCeEEEEEc-CCCCEEEEecCCCeEEEcC
Q psy17135 75 -------------KKFDESILDVAFH-PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 -------------~~~~~~v~~~~~~-~~~~~~~s~~~d~~i~iwd 106 (106)
..+...+.++.|+ |++..+++++.|+++++||
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 1123678888886 7999999999999999996
No 106
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.62 E-value=4.4e-15 Score=88.63 Aligned_cols=94 Identities=18% Similarity=0.349 Sum_probs=75.4
Q ss_pred CceEEEEeCccCceeeec---ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135 6 SSVIYIWTLLELQTYARN---DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES 80 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~ 80 (106)
|+.|++||+.+++..... ....+...+..+.|+|.+.. +++++.|+.|++||+.+++ ....+..|. ..
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----~~ 143 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT---LIVGGEASTLSIWDLAAPTPRIKAELTSSA----PA 143 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE---EEEEESSSEEEEEECCCC--EEEEEEECSS----SC
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE---EEEEcCCCcEEEEECCCCCcceeeecccCC----Cc
Confidence 899999999876642222 22234555677899998776 8999999999999999876 455666676 78
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+++|+|++..+++++.|+.+++||
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d 169 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWD 169 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999999996
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.6e-15 Score=93.01 Aligned_cols=100 Identities=11% Similarity=0.171 Sum_probs=74.4
Q ss_pred cCCCceEEEEeCccCceeeecccCC------------------------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPE------------------------LNSEPPACQTIPSSNISLFDSRPGHDCSIRL 58 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~i 58 (106)
...|++|++||+.+++.+..+.... +...+..+.|. .+.. +++++.|+.|++
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~---l~s~~~d~~i~~ 354 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI---LLTDEATSSIVM 354 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE---EEEEGGGTEEEE
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE---EEecCCCCeEEE
Confidence 3578999999999988765554321 22224445666 3433 899999999999
Q ss_pred eeCCCccchheecccc---------------------------------ccCCCCeEEEEEcCC--CCEEEEecCCCeEE
Q psy17135 59 WNLDNKTCVQEITAHR---------------------------------KKFDESILDVAFHPS--KPFIASAGADGLAK 103 (106)
Q Consensus 59 wd~~~~~~~~~~~~~~---------------------------------~~~~~~v~~~~~~~~--~~~~~s~~~d~~i~ 103 (106)
||+.+++++..+..|. ..|...|.+++|+++ +.++++|+.||.|+
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence 9999998877776521 013389999999987 77999999999999
Q ss_pred EcC
Q psy17135 104 VFV 106 (106)
Q Consensus 104 iwd 106 (106)
+|.
T Consensus 435 iw~ 437 (437)
T 3gre_A 435 IFQ 437 (437)
T ss_dssp EEC
T ss_pred EeC
Confidence 995
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.62 E-value=5.5e-15 Score=90.99 Aligned_cols=93 Identities=9% Similarity=0.147 Sum_probs=79.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|++||+.+++........ +...+.++.|+|.+.. +++++.|+.|++||+.+++.+..+..|. ..|.+
T Consensus 110 ~~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~v~~ 181 (401)
T 4aez_A 110 ALERNVYVWNADSGSVSALAETD-ESTYVASVKWSHDGSF---LSVGLGNGLVDIYDVESQTKLRTMAGHQ----ARVGC 181 (401)
T ss_dssp EETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECTTSSE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred ECCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECCCCCE---EEEECCCCeEEEEECcCCeEEEEecCCC----CceEE
Confidence 46899999999999886655553 3455777999998777 8999999999999999999898998888 89999
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++|+ +..+++++.|+.|++||
T Consensus 182 ~~~~--~~~l~~~~~dg~i~i~d 202 (401)
T 4aez_A 182 LSWN--RHVLSSGSRSGAIHHHD 202 (401)
T ss_dssp EEEE--TTEEEEEETTSEEEEEE
T ss_pred EEEC--CCEEEEEcCCCCEEEEe
Confidence 9995 57999999999999996
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.61 E-value=4.4e-15 Score=90.34 Aligned_cols=99 Identities=10% Similarity=0.040 Sum_probs=70.6
Q ss_pred CCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.|+.|++|++.. ++.+..... |......+.|.+....+..+++++.|++|++||++++++++++.+|.. +...+.+
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~--~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-~v~~v~~ 231 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFL--MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-YQASVCH 231 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEE--CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEE
T ss_pred CCCcEEEEEECCCCceeeeecc--CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-ceeeeEE
Confidence 589999999954 666554444 344566678888322222389999999999999999999999976531 0146778
Q ss_pred EEEcCCCCEE------------EEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFI------------ASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~------------~s~~~d~~i~iwd 106 (106)
++|+|++..+ ++|+.|+++++||
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 8999999876 6688899999996
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.61 E-value=8.6e-16 Score=98.43 Aligned_cols=96 Identities=10% Similarity=0.162 Sum_probs=72.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~ 82 (106)
.|||.+..|++.+++....+...+ ...+..+.|+|.+.. +++++.||.|++||.+. ++..+. |... ....+.
T Consensus 61 sPdg~~~~~~~~~~~~~~~~~~~~-~~~V~~vawSPdG~~---LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~ 133 (588)
T 2j04_A 61 FPLEFENKLDFELAQQNGLLNSQP-VCYPRVCKPSPIDDW---MAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYH 133 (588)
T ss_dssp ECCCCCCTTTTSCCCSSCSSTTSC-SCCEEEEEECSSSSC---EEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEE
T ss_pred CCCCCcceEEEEeCCCceEeecCC-CCcEEEEEECCCCCE---EEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEE
Confidence 466677777777666433444333 556788999999999 89999999999999644 555555 4410 012699
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|||+++.|++|+.||+|++||
T Consensus 134 svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 134 CFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEE
Confidence 999999999999999999999996
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.7e-15 Score=99.80 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=77.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC-------------CCCceEEEeeCCCCcEEEeeCCCc----c
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS-------------SNISLFDSRPGHDCSIRLWNLDNK----T 65 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~~~d~~v~iwd~~~~----~ 65 (106)
...||+|++||+.++..........+...+..+.|.|. +.. +++++.|+.|++||++++ .
T Consensus 119 gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~---l~sgs~dg~I~iwd~~~~~~~~~ 195 (753)
T 3jro_A 119 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK---FVTGGADNLVKIWKYNSDAQTYV 195 (753)
T ss_dssp EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC---EEEEETTSCEEEEEEETTTTEEE
T ss_pred EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE---EEEEECCCeEEEEeccCCcccce
Confidence 35789999999998754334444445556777889884 455 899999999999999876 3
Q ss_pred chheeccccccCCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135 66 CVQEITAHRKKFDESILDVAFHPS---KPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd 106 (106)
+...+..|. ..|.+++|+|+ +..+++++.|+.|++||
T Consensus 196 ~~~~~~~h~----~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 196 LESTLEGHS----DWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp EEEEECCCS----SCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred eeeeecCCC----CcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 455666777 89999999999 89999999999999996
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.60 E-value=6.3e-15 Score=91.95 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=76.8
Q ss_pred CCCceEEEEeCccCceee--ecccCCCCCCCCeeEeeeC---CCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccC
Q psy17135 4 VPSSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPS---SNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~ 77 (106)
..|+.|++|++.+++... ......|...+..+.|+|. +.. +++++.|+.|++||+++++++.. +.+|.
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~---l~s~~~d~~i~vwd~~~~~~~~~~~~~h~--- 241 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF---IITSDRDEHIKISHYPQCFIVDKWLFGHK--- 241 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE---EEEEETTSCEEEEEESCTTCEEEECCCCS---
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE---EEEEcCCCcEEEEECCCCceeeeeecCCC---
Confidence 357899999998877532 1122224556777899998 555 89999999999999999887776 45777
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+ ++.++++++.|+.|++||
T Consensus 242 -~~v~~~~~s-d~~~l~s~~~d~~v~vwd 268 (450)
T 2vdu_B 242 -HFVSSICCG-KDYLLLSAGGDDKIFAWD 268 (450)
T ss_dssp -SCEEEEEEC-STTEEEEEESSSEEEEEE
T ss_pred -CceEEEEEC-CCCEEEEEeCCCeEEEEE
Confidence 899999999 999999999999999996
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=91.76 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=74.4
Q ss_pred cCCCceEEEEeCccCc---eeeecccCCC----------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe
Q psy17135 3 KVPSSVIYIWTLLELQ---TYARNDCPEL----------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE 69 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~ 69 (106)
...|+.|++||+.... .+..+..+.. ...+..+.|+|.+.. +++++.|+.|++||+++++++..
T Consensus 234 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~---l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT---LATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC---EEEEETTSCEEEEETTTTEEEEE
T ss_pred ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE---EEEEccCCeEEEEECCCCcEEEE
Confidence 3568999999998763 3223332111 013667889998877 89999999999999999999999
Q ss_pred eccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
+..|. ..|.+++|+|++.++++++.|+..+
T Consensus 311 ~~~~~----~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 311 SEQLD----QPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp CCCCS----SCEEEEEECTTSSCEEEEECCCSTT
T ss_pred ecCCC----CCceEEEECCCCCeEEEEecccccc
Confidence 98888 8999999999999999999887543
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.59 E-value=1.7e-14 Score=89.64 Aligned_cols=96 Identities=22% Similarity=0.251 Sum_probs=74.8
Q ss_pred cCCCceEEEEeCcc----------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------
Q psy17135 3 KVPSSVIYIWTLLE----------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------ 66 (106)
Q Consensus 3 ~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------ 66 (106)
...||.|++||+.+ .+.+..+. .|...+..+.|+|.+... +++++.|+.|++|++.++..
T Consensus 147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~--l~s~~~dg~i~vwd~~~~~~~~~~~~ 222 (430)
T 2xyi_A 147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGY--LLSASDDHTICLWDINATPKEHRVID 222 (430)
T ss_dssp ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTE--EEEECTTSCEEEEETTSCCBGGGEEE
T ss_pred ECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCe--EEEEeCCCeEEEEeCCCCCCCCceec
Confidence 35689999999987 34433333 355667889999988732 89999999999999987432
Q ss_pred -hheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 67 -VQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 67 -~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
...+..|. ..|.+++|+| ++..+++++.|+.|++||
T Consensus 223 ~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 223 AKNIFTGHT----AVVEDVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp CSEEECCCS----SCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred cceeecCCC----CCEeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 33455566 8999999999 778899999999999996
No 115
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.58 E-value=2e-14 Score=94.53 Aligned_cols=96 Identities=20% Similarity=0.381 Sum_probs=80.9
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
...|++|++||+.+++........ +...+..+.|.| .+.. +++++.|+.|++||+.+++++..+..|. ..
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~ 230 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPY---MITASDDLTIKIWDYQTKSCVATLEGHM----SN 230 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECC-CTTCCCEEEECCSTTCCE---EEEECTTSEEEEEETTTTEEEEEEECCS----SC
T ss_pred EeCCCeEEEEECCCCcceeEEecC-CCCCEEEEEEEECCCCCE---EEEEeCCCEEEEEECCCCcEEEEEcCCC----CC
Confidence 356899999999888775444442 224577788988 5555 7999999999999999999888888887 89
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+++|+|++..+++++.|+.|++||
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd 256 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWN 256 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999996
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.58 E-value=2.6e-14 Score=85.68 Aligned_cols=93 Identities=13% Similarity=0.059 Sum_probs=75.4
Q ss_pred cCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCC-CceEEEeeCCCCcEEEeeC-CCccchheecc--ccc
Q psy17135 3 KVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSN-ISLFDSRPGHDCSIRLWNL-DNKTCVQEITA--HRK 75 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~v~iwd~-~~~~~~~~~~~--~~~ 75 (106)
...|+.|++||+.+++ ...... .+...+.++.|.|.+. . +++++.|+.|++||+ .+++. ..+.. |.
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~---l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~- 101 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQ---IYVGTVQGEILKVDLIGSPSF-QALTNNEAN- 101 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEE---EEEEETTSCEEEECSSSSSSE-EECBSCCCC-
T ss_pred EcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcE---EEEEcCCCeEEEEEeccCCce-EeccccCCC-
Confidence 3578999999999877 112222 2455677799999877 6 899999999999999 77654 56666 76
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..|.+++|+| +..+++++.|+.+++||
T Consensus 102 ---~~v~~l~~~~-~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 102 ---LGICRICKYG-DDKLIAASWDGLIEVID 128 (342)
T ss_dssp ---SCEEEEEEET-TTEEEEEETTSEEEEEC
T ss_pred ---CceEEEEeCC-CCEEEEEcCCCeEEEEc
Confidence 8999999999 99999999999999997
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.58 E-value=1.3e-14 Score=90.20 Aligned_cols=91 Identities=15% Similarity=0.277 Sum_probs=75.1
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...||+|++||+.+++....+.. |...+.++.| .+.. +++|+.|+.|++||+.+++++..+..|. ..|.
T Consensus 149 g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~--~~~~---l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~ 217 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERV---IITGSSDSTVRVWDVNTGEMLNTLIHHC----EAVL 217 (435)
T ss_dssp EESSSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSE---EEEEETTSCEEEEESSSCCEEEEECCCC----SCEE
T ss_pred EeCCCeEEEEeCCCCeEEEEEcC--CCCcEEEEEE--CCCE---EEEEcCCCeEEEEECCCCcEEEEEcCCC----CcEE
Confidence 35789999999999998665554 4444555655 3444 8999999999999999999999998888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++|++ ..+++++.|+.|++||
T Consensus 218 ~l~~~~--~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 218 HLRFNN--GMMVTCSKDRSIAVWD 239 (435)
T ss_dssp EEECCT--TEEEEEETTSCEEEEE
T ss_pred EEEEcC--CEEEEeeCCCcEEEEe
Confidence 999974 5899999999999996
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.58 E-value=2e-14 Score=89.43 Aligned_cols=95 Identities=17% Similarity=0.243 Sum_probs=75.3
Q ss_pred cCCCceEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-----ccccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-----AHRKK 76 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~ 76 (106)
...||.|++||+.+++.+..+.... +...+.++.|. +.. +++++.|+.|++||+.+++.+..+. .+.
T Consensus 335 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-- 407 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF---VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG-- 407 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE---EEEEETTSEEEEEETTTCCEEEEEEECTTGGGT--
T ss_pred EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE---EEEEeCCCeEEEEECCCCceeeeeeccccCCCC--
Confidence 3468999999999998877666533 33344455553 333 8999999999999999998887772 344
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCe----EEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAGADGL----AKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~d~~----i~iwd 106 (106)
..|.+++|+|++..+++++.||+ +.+||
T Consensus 408 --~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 408 --GVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp --CEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred --ceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 78999999999999999999997 88886
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.57 E-value=1.5e-14 Score=89.90 Aligned_cols=91 Identities=20% Similarity=0.318 Sum_probs=75.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|++|++||+.+++.+..+.. |...+.++.+ .+.. +++++.|+.|++||+++++++..+.+|. ..+.
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~---l~~g~~dg~i~iwd~~~~~~~~~~~~h~----~~v~ 340 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQY--RDRL---VVSGSSDNTIRLWDIECGACLRVLEGHE----ELVR 340 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEE--ETTE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred EeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEe--CCCE---EEEEeCCCeEEEEECCCCCEEEEEeCCc----CcEE
Confidence 35799999999999998666654 3444445555 2344 7999999999999999999999999888 8999
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++| ++..+++|+.|+.|++||
T Consensus 341 ~~~~--~~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 341 CIRF--DNKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp EEEC--CSSEEEEEETTSCEEEEE
T ss_pred EEEe--cCCEEEEEeCCCcEEEEE
Confidence 9988 688999999999999996
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.57 E-value=2.4e-14 Score=87.15 Aligned_cols=53 Identities=23% Similarity=0.227 Sum_probs=46.5
Q ss_pred eCCCCcEEEeeCCCcc----------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCe-EEEcC
Q psy17135 50 PGHDCSIRLWNLDNKT----------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL-AKVFV 106 (106)
Q Consensus 50 ~~~d~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~-i~iwd 106 (106)
++.+|.|++||+.++. ++..+.+|. ..|.+++|+|++.++++|+.|++ |++||
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~----~~v~~~~~s~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT----NPIKMVRLNRKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCS----SCEEEEEECTTSSEEEEEETTCSEEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC----CceEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 7899999999998765 266778887 89999999999999999999998 99996
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.55 E-value=3.2e-14 Score=88.51 Aligned_cols=91 Identities=14% Similarity=0.271 Sum_probs=74.3
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...||+|++||+.+++.+..+.. |...+.++.+. +.. +++++.|+.|++||+.+++++..+..|. ..|.
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~---l~s~~~dg~i~vwd~~~~~~~~~~~~h~----~~v~ 203 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMR--DNI---IISGSTDRTLKVWNAETGECIHTLYGHT----STVR 203 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCC--CSSCEEEEEEE--TTE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred EECCCcEEEEECCCCcEEEEEcC--CCCCEEEEEec--CCE---EEEEeCCCeEEEEECCcCcEEEEECCCC----CcEE
Confidence 35799999999999998665554 44455556665 333 7999999999999999999888888888 8899
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.++ +..+++++.|+.+++||
T Consensus 204 ~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 204 CMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEEec--CCEEEEEeCCCEEEEEE
Confidence 99986 56799999999999996
No 122
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.55 E-value=2.4e-14 Score=87.59 Aligned_cols=71 Identities=8% Similarity=0.039 Sum_probs=55.9
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCC----cEEEeeCCCccc----hheeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDC----SIRLWNLDNKTC----VQEITAHRKKFDESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~----~v~iwd~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
...+..+.|+|.+.. +++++.++ .++.|+...... ...+..|. ..|.+++|+|++++|++|+.|+
T Consensus 219 ~~~v~~v~fspdg~~---l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 219 NWSLSKINFIADDTV---LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----KGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp TEEEEEEEEEETTEE---EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----SCEEEEEECTTSCEEEEEETTS
T ss_pred CCCEEEEEEcCCCCE---EEEEecCCcceeEEeecccccceecceeeeeecCCC----CCeEeEEECCCCCceEEEcCCC
Confidence 333556788888877 78887776 578888876543 34455666 7999999999999999999999
Q ss_pred eEEEcC
Q psy17135 101 LAKVFV 106 (106)
Q Consensus 101 ~i~iwd 106 (106)
+|++||
T Consensus 292 ~V~iwd 297 (365)
T 4h5i_A 292 SIALVK 297 (365)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 999997
No 123
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.53 E-value=6.6e-14 Score=82.88 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=75.8
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~ 79 (106)
...||.|++||+.+++....+.. +...+..+.|+|.+.. +++++.|+.+++|++... +.+..+..|. .
T Consensus 35 ~~~dg~v~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~----~ 105 (313)
T 3odt_A 35 VSRDGTVRLWSKDDQWLGTVVYT--GQGFLNSVCYDSEKEL---LLFGGKDTMINGVPLFATSGEDPLYTLIGHQ----G 105 (313)
T ss_dssp EETTSEEEEEEESSSEEEEEEEE--CSSCEEEEEEETTTTE---EEEEETTSCEEEEETTCCTTSCC-CEECCCS----S
T ss_pred EEcCCcEEEEECCCCEEEEEeec--CCccEEEEEECCCCCE---EEEecCCCeEEEEEeeecCCCCcccchhhcc----c
Confidence 45799999999998887554443 3556777999998877 899999999999998764 4566777777 8
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.++.| ++..+++++.|+.+++||
T Consensus 106 ~i~~~~~--~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 106 NVCSLSF--QDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred CEEEEEe--cCCEEEEEeCCCCEEEEc
Confidence 9999999 577999999999999996
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.49 E-value=2e-13 Score=83.41 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=75.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
...|+.|++||+.+++.+..+.. +..+..+.|+|.+... +++++.++.|++||+.+++.+..+..+ ..+.
T Consensus 8 ~~~d~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l--~~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~v~ 77 (391)
T 1l0q_A 8 NSESDNISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKV--YVANAHSNDVSIIDTATNNVIATVPAG-----SSPQ 77 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEE--EEEEGGGTEEEEEETTTTEEEEEEECS-----SSEE
T ss_pred cCCCCEEEEEECCCCeEEEEeec---CCCcceEEECCCCCEE--EEECCCCCeEEEEECCCCeEEEEEECC-----CCcc
Confidence 45789999999999988665554 2346678899988763 478889999999999999887777644 4889
Q ss_pred EEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
+++|+|++..+ ++++.++.|++||
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEE
Confidence 99999999976 5666779999996
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.45 E-value=1.2e-12 Score=79.88 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=75.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|++|++||+.+++.+..+... . .+..+.|+|.+... +++++.++.|++||+.+++.+..+..+ ..+.+
T Consensus 51 ~~d~~i~v~d~~~~~~~~~~~~~--~-~v~~~~~spdg~~l--~~~~~~~~~v~v~d~~~~~~~~~~~~~-----~~~~~ 120 (391)
T 1l0q_A 51 AHSNDVSIIDTATNNVIATVPAG--S-SPQGVAVSPDGKQV--YVTNMASSTLSVIDTTSNTVAGTVKTG-----KSPLG 120 (391)
T ss_dssp GGGTEEEEEETTTTEEEEEEECS--S-SEEEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEEEEECS-----SSEEE
T ss_pred CCCCeEEEEECCCCeEEEEEECC--C-CccceEECCCCCEE--EEEECCCCEEEEEECCCCeEEEEEeCC-----CCcce
Confidence 46899999999999886665542 2 56678899988763 467778899999999999887777644 47899
Q ss_pred EEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
++|+|++..+ ++++.++.|++||
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEE
Confidence 9999999976 7888999999996
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.44 E-value=6.8e-13 Score=81.96 Aligned_cols=97 Identities=6% Similarity=-0.035 Sum_probs=76.1
Q ss_pred cCCCceEEEEeCccCceeeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
...++.|++||+.+++....... ..|...+..+.|.+.+.. +++++.|+.|++||+++++.+..+..+. .
T Consensus 140 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~s~~~d~~v~~~d~~~~~~~~~~~~~~----~ 212 (433)
T 3bws_A 140 LLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNEL---WVSQMQANAVHVFDLKTLAYKATVDLTG----K 212 (433)
T ss_dssp BTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEE---EEEEGGGTEEEEEETTTCCEEEEEECSS----S
T ss_pred eCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEE---EEEECCCCEEEEEECCCceEEEEEcCCC----C
Confidence 34678899999999887543222 123444556777666655 7999999999999999988888887777 7
Q ss_pred CeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
.+.+++|+|++..+ ++++.++.|++||
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 89999999999877 5666899999996
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.37 E-value=7.9e-12 Score=77.21 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=71.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---------------CCcEEEeeCCCccchh
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---------------DCSIRLWNLDNKTCVQ 68 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---------------d~~v~iwd~~~~~~~~ 68 (106)
..|+.|++||+.+++.+..+.. ...+..+.|.|.+.. +++++. ||.|++||..+++.+.
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~---l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSIPV---FDKPNTIALSPDGKY---LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSE---EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred cCCCEEEEEECCCCcEEEEecC---CCCCCeEEEcCCCCE---EEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 5789999999999887655542 334567888888776 444443 5799999999998877
Q ss_pred eeccccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 69 EITAHRKKFDESILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
.+..+ ..+..++|+|++..+++++ .|+.+++|+
T Consensus 396 ~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 396 FWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 77653 5789999999999988776 599999995
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.28 E-value=3e-11 Score=77.52 Aligned_cols=92 Identities=13% Similarity=-0.005 Sum_probs=75.1
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC--CCccchheeccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL--DNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~v 81 (106)
..|++|.+||..+++.+..+... .. ...+.++|.+.. +++++.|+.|.+||+ .+++++..+.. . ...
T Consensus 156 ~~d~~V~v~D~~t~~~~~~i~~g--~~-~~~v~~spdg~~---l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g----~~p 224 (543)
T 1nir_A 156 RDAGQIALVDGDSKKIVKVIDTG--YA-VHISRMSASGRY---LLVIGRDARIDMIDLWAKEPTKVAEIKI-G----IEA 224 (543)
T ss_dssp GGGTEEEEEETTTCCEEEEEECS--TT-EEEEEECTTSCE---EEEEETTSEEEEEETTSSSCEEEEEEEC-C----SEE
T ss_pred cCCCeEEEEECCCceEEEEEecC--cc-cceEEECCCCCE---EEEECCCCeEEEEECcCCCCcEEEEEec-C----CCc
Confidence 46899999999999987766642 22 456778998887 788888999999999 78888777763 3 578
Q ss_pred EEEEEcC----CCCEEEEec-CCCeEEEcC
Q psy17135 82 LDVAFHP----SKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~----~~~~~~s~~-~d~~i~iwd 106 (106)
..++|+| +++++++++ .+++|.+||
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 9999999 999988887 489999986
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.24 E-value=1.7e-11 Score=76.71 Aligned_cols=87 Identities=9% Similarity=-0.027 Sum_probs=62.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---cCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---KFDE 79 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---~~~~ 79 (106)
...||+|++||++++........ |...+.++.|+|.+.. +++|+.|+.|++||.+ ++....+..+.. .+..
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~--~~~~v~~v~wspdg~~---lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~ 241 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLP--STVAVTSVCWSPKGKQ---LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPV 241 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEEC--GGGCEEEEEECTTSSC---EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCE
T ss_pred EECCCeEEEEEcCCCcceeeccC--CCCceeEEEEcCCCCE---EEEEcCCCcEEEEccC-CcccccccCCcccCCCCce
Confidence 35799999999998865333222 3445778999999887 8999999999999998 554444443321 0113
Q ss_pred CeEEEEEcCCCCEEEE
Q psy17135 80 SILDVAFHPSKPFIAS 95 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s 95 (106)
.+.++.|++++.++++
T Consensus 242 ~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIV 257 (434)
T ss_dssp EEEEEEEEETTEEEEE
T ss_pred eEEEEEEecCceEEEE
Confidence 7899999998877644
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.22 E-value=8.1e-11 Score=73.13 Aligned_cols=89 Identities=10% Similarity=-0.008 Sum_probs=66.5
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC---cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC---SIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
+.|++||+..+.. ..+.. +...+..+.|+|.+.. +++++.++ .|++||+.+++.. .+..+. ..+.+
T Consensus 159 ~~i~i~d~~g~~~-~~l~~--~~~~v~~~~~Spdg~~---la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~----~~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYNQ-FVVHR--SPQPLMSPAWSPDGSK---LAYVTFESGRSALVIQTLANGAVR-QVASFP----RHNGA 227 (415)
T ss_dssp EEEEEEETTSCSC-EEEEE--ESSCEEEEEECTTSSE---EEEEECTTSSCEEEEEETTTCCEE-EEECCS----SCEEE
T ss_pred ceEEEEcCCCCCC-EEEeC--CCCcceeeEEcCCCCE---EEEEEecCCCcEEEEEECCCCcEE-EeecCC----CcccC
Confidence 7999999985443 23332 3445677999999887 77777764 8999999988764 455566 78999
Q ss_pred EEEcCCCCEEE-EecCCCe--EEEcC
Q psy17135 84 VAFHPSKPFIA-SAGADGL--AKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~-s~~~d~~--i~iwd 106 (106)
++|+|+++.++ +++.++. |++||
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEE
Confidence 99999999876 7776665 77775
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=1.7e-10 Score=67.46 Aligned_cols=92 Identities=12% Similarity=-0.012 Sum_probs=67.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~ 82 (106)
..|++|++||+.+++...... +...+..+.|+|.+.. +++++ ++.|.+||+.+ ++.......+.. ..+.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~---~~~~v~~~~~spdg~~---l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~---~~~~ 88 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQ---TPELFEAPNWSPDGKY---LLLNS-EGLLYRLSLAGDPSPEKVDTGFAT---ICNN 88 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEE---ESSCCEEEEECTTSSE---EEEEE-TTEEEEEESSSCCSCEECCCTTCC---CBCS
T ss_pred CcceeEEEEeCCCCceeeecc---CCcceEeeEECCCCCE---EEEEc-CCeEEEEeCCCCCCceEecccccc---cccc
Confidence 468999999999888643222 2445777999998887 66665 78999999998 776555544431 5778
Q ss_pred EEEEcCCCCEEEEec--CCCeEEEc
Q psy17135 83 DVAFHPSKPFIASAG--ADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~--~d~~i~iw 105 (106)
+++|+|++..+++++ .++...+|
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEE
Confidence 899999999998888 33455554
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.15 E-value=9.2e-10 Score=68.42 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=64.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..|++||+.+++... +.. +......+.|+|.+... +++++.++. |.+||+.+++. ..+..+. ..+..+
T Consensus 203 ~~i~~~d~~tg~~~~-l~~--~~~~~~~~~~spdg~~l--a~~~~~~g~~~i~~~d~~~~~~-~~l~~~~----~~~~~~ 272 (415)
T 2hqs_A 203 SALVIQTLANGAVRQ-VAS--FPRHNGAPAFSPDGSKL--AFALSKTGSLNLYVMDLASGQI-RQVTDGR----SNNTEP 272 (415)
T ss_dssp CEEEEEETTTCCEEE-EEC--CSSCEEEEEECTTSSEE--EEEECTTSSCEEEEEETTTCCE-EECCCCS----SCEEEE
T ss_pred cEEEEEECCCCcEEE-eec--CCCcccCEEEcCCCCEE--EEEEecCCCceEEEEECCCCCE-EeCcCCC----Ccccce
Confidence 589999999988732 221 23345678999998873 236666554 88999988765 4566666 789999
Q ss_pred EEcCCCCEEEEecC-CC--eEEEcC
Q psy17135 85 AFHPSKPFIASAGA-DG--LAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~-d~--~i~iwd 106 (106)
+|+|+++.++.++. ++ .+.+||
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EECCCCCEEEEEECCCCCcEEEEEE
Confidence 99999998877665 45 455543
No 133
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=2.5e-10 Score=68.47 Aligned_cols=101 Identities=13% Similarity=0.083 Sum_probs=72.2
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc--cCCCC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK--KFDES 80 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~ 80 (106)
...+++|.+||+.+++.+..+.... ......+.+.|.+... +++...++.|.+||+.+++.+..+..... .....
T Consensus 17 ~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~~--~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~ 93 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAPDNRTA--YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 93 (349)
T ss_dssp EETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred eCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEECCCCCEE--EEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence 3468999999999998866665431 1135678888887642 46777889999999998887666543220 00023
Q ss_pred eEEEEEcCCCCEEEEecCC------------CeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAGAD------------GLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d------------~~i~iwd 106 (106)
+..++|+|+++.+++++.+ +.+.+||
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d 131 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS 131 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEE
Confidence 6788999999998888765 8888885
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.08 E-value=1.1e-09 Score=65.34 Aligned_cols=101 Identities=10% Similarity=0.067 Sum_probs=71.8
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc-cCCCCeE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK-KFDESIL 82 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~v~ 82 (106)
..++.|.+||+.+++.+..+...........+.++|.+... ++++..++.|.+||+.+++.+..+..... .+...+.
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l--~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIA--YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEE--EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEE--EEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 46899999999999886666543211035668888887653 56777889999999999887766543210 0002567
Q ss_pred EEEEcCCCCEEEEec------------CCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAG------------ADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~------------~d~~i~iwd 106 (106)
.++|+|++..+++++ .++.+.+||
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence 889999999887775 568898885
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.07 E-value=6.3e-10 Score=66.54 Aligned_cols=95 Identities=9% Similarity=0.014 Sum_probs=69.5
Q ss_pred cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCe
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESI 81 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v 81 (106)
...++.|.+||+.+++........ .... .+.++|.+... +++...++.|.+||..+++. ...+..+. ...
T Consensus 16 ~~~~~~v~~~d~~~~~~~~~~~~~--~~~~-~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~ 86 (331)
T 3u4y_A 16 EQHLRRISFFSTDTLEILNQITLG--YDFV-DTAITSDCSNV--VVTSDFCQTLVQIETQLEPPKVVAIQEGQ----SSM 86 (331)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECC--CCEE-EEEECSSSCEE--EEEESTTCEEEEEECSSSSCEEEEEEECS----SCC
T ss_pred ecCCCeEEEEeCcccceeeeEEcc--CCcc-eEEEcCCCCEE--EEEeCCCCeEEEEECCCCceeEEecccCC----CCc
Confidence 456889999999999886665542 3233 78888888752 45566688999999998887 55565554 344
Q ss_pred EEEEEcCCCCEEEEecCCC---eEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADG---LAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~---~i~iwd 106 (106)
.+++|+|++++++++..++ .+.+||
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEE
Confidence 4489999999988655553 899885
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.07 E-value=1.3e-09 Score=71.59 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=67.0
Q ss_pred eEEEEeCccCceeeecccCCCC----------------------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc
Q psy17135 8 VIYIWTLLELQTYARNDCPELN----------------------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT 65 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~ 65 (106)
.|.+||+.+++........... ..+..+.|+|++.. +++++. +.|.+||+.++.
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~---l~~~~~-~~i~~~d~~~~~ 140 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR---LLFPLG-GELYLYDLKQEG 140 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE---EEEEET-TEEEEEESSSCS
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE---EEEEeC-CcEEEEECCCCC
Confidence 8999999998874444332111 12566889999887 566665 899999998873
Q ss_pred --chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 66 --CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 66 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
....+..+. ..+..++|||+++.++.++ ++.|++||
T Consensus 141 ~~~~~~l~~~~----~~~~~~~~SPDG~~la~~~-~~~i~~~d 178 (741)
T 2ecf_A 141 KAAVRQLTHGE----GFATDAKLSPKGGFVSFIR-GRNLWVID 178 (741)
T ss_dssp TTSCCBCCCSS----SCEEEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred cceEEEcccCC----cccccccCCCCCCEEEEEe-CCcEEEEe
Confidence 355566666 6899999999999998887 45888885
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.05 E-value=6.8e-09 Score=62.36 Aligned_cols=97 Identities=5% Similarity=-0.032 Sum_probs=71.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|.+||+.+++....+... ......+.|.|.+.. ++.++.++.+.+||..+++.+..+......+...+..+
T Consensus 162 ~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~s~dg~~---l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 3vgz_A 162 KESVIWVVDGGNIKLKTAIQNT--GKMSTGLALDSEGKR---LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINI 236 (353)
T ss_dssp SSCEEEEEETTTTEEEEEECCC--CTTCCCCEEETTTTE---EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEE
T ss_pred CCceEEEEcCCCCceEEEecCC--CCccceEEECCCCCE---EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceE
Confidence 4788999999999886655521 223566888998887 67777899999999999987776654221112567889
Q ss_pred EEcCCCCEEEEe-cCCCeEEEcC
Q psy17135 85 AFHPSKPFIASA-GADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~-~~d~~i~iwd 106 (106)
+|+|++..++.+ ..++.+.+||
T Consensus 237 ~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 237 SLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp EEETTTTEEEEEESSSSEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEE
Confidence 999999875554 4558898885
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.05 E-value=4.4e-10 Score=73.51 Aligned_cols=95 Identities=5% Similarity=-0.043 Sum_probs=67.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCC---CCCeeEeeeCCCCceEEEeeCCC---------CcEEEeeCCCccchheec
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNS---EPPACQTIPSSNISLFDSRPGHD---------CSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~d---------~~v~iwd~~~~~~~~~~~ 71 (106)
..|++|++||+.+++....+.. +.. .+..+.|+|++.. +++++.+ +.+.+||+.+++. ..+.
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~--~~~~~~~v~~~~~SpDg~~---l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~ 107 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEG--KKIESLRAIRYEISPDREY---ALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD 107 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECT--TTTTTTTCSEEEECTTSSE---EEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC
T ss_pred eCCCCEEEEECCCCcEEEEecc--ccccccccceEEECCCCCE---EEEEecCccceeecceeeEEEEECCCCce-Eecc
Confidence 4688999999999887444433 221 3677899999887 6666543 6788999998875 3333
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
... .+...+..++|||+++.++.++. +.|++||
T Consensus 108 ~~~-~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 108 PPE-VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp CTT-CCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred CCc-cccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 221 01145788999999999988875 7888885
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.04 E-value=1.3e-09 Score=64.99 Aligned_cols=88 Identities=9% Similarity=0.043 Sum_probs=66.3
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH 87 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 87 (106)
.|.+||+.+++.. ......+......+.|+|.+.. ++++ ++.|.+||+.+++.+..+... ..+..++|+
T Consensus 220 ~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~---l~~~--~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s 288 (337)
T 1pby_B 220 GLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR---AFGA--YNVLESFDLEKNASIKRVPLP-----HSYYSVNVS 288 (337)
T ss_dssp EEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE---EEEE--ESEEEEEETTTTEEEEEEECS-----SCCCEEEEC
T ss_pred ceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE---EEEe--CCeEEEEECCCCcCcceecCC-----CceeeEEEC
Confidence 5899999998874 3222222333456888888776 5555 689999999998877666543 467889999
Q ss_pred CCCCEEEEecCCCeEEEcC
Q psy17135 88 PSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 88 ~~~~~~~s~~~d~~i~iwd 106 (106)
|+++.+++++.++.+.+||
T Consensus 289 ~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 289 TDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp TTSCEEEEESBSSEEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEE
Confidence 9999988889999999986
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.03 E-value=3.4e-09 Score=68.13 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=70.4
Q ss_pred CCCceEEEEeCcc-------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-------CCCcEEEeeCCCccch-h
Q psy17135 4 VPSSVIYIWTLLE-------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-------HDCSIRLWNLDNKTCV-Q 68 (106)
Q Consensus 4 ~~d~~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------~d~~v~iwd~~~~~~~-~ 68 (106)
..|++|.+||+.+ .+.+..+..+ ......+.++|.+.. |.+++ .+++|.+||+.+++.. .
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~--g~~~~~v~~~pdg~~---l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~ 464 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQ--GGGSLFIKTHPKSSH---LYVDTTFNPDARISQSVAVFDLKNLDAKYQ 464 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCCE---EEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcC--CCCceEEEcCCCCCc---EEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence 3579999999998 6766665552 334566888998888 67765 2679999999998766 3
Q ss_pred ee--------ccccccCCCCeEEEEEcCCCCEEEEe-----cCCCeEEEcC
Q psy17135 69 EI--------TAHRKKFDESILDVAFHPSKPFIASA-----GADGLAKVFV 106 (106)
Q Consensus 69 ~~--------~~~~~~~~~~v~~~~~~~~~~~~~s~-----~~d~~i~iwd 106 (106)
.+ ..+. ..+..+.|+|+|+.+..+ +.++.|.+||
T Consensus 465 ~~~v~~~~~~~~~~----~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 465 VLPIAEWADLGEGA----KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp EECHHHHHCCCSSC----CEEEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred EeechhhcccCCCC----CceEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 33 2233 689999999999987654 2479999987
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.02 E-value=8.2e-09 Score=62.02 Aligned_cols=96 Identities=7% Similarity=0.013 Sum_probs=70.3
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC-----CCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF-----DES 80 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-----~~~ 80 (106)
++.|.+||..+++.+..+... .....+.+.|.+... +++...++.|.+||..+++.+..+..+.... ...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l--~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND---LKPFGATINNTTQTL--WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQ 142 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES---SCCCSEEEETTTTEE--EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCE
T ss_pred CccEEEEcCCCCeEEEEEecC---CCcceEEECCCCCEE--EEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCC
Confidence 789999999999886666542 235668888888753 5677778999999999998777776543100 012
Q ss_pred eEEEEEcCCCCEEEEec--CCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAG--ADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~--~d~~i~iwd 106 (106)
+..+.|+|++..++.++ .++.|.+||
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEc
Confidence 68899999998765554 578888885
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.01 E-value=2.2e-09 Score=64.14 Aligned_cols=94 Identities=12% Similarity=0.066 Sum_probs=62.0
Q ss_pred CCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-CcEEEeeCC--Cccc--hheeccccccC
Q psy17135 4 VPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-CSIRLWNLD--NKTC--VQEITAHRKKF 77 (106)
Q Consensus 4 ~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~--~~~~--~~~~~~~~~~~ 77 (106)
..|+.|++||+. +++........ +......+.|+|.+.. +++++.+ +.+.+|++. +++. +..+.. .
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~---l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~--- 83 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRY---LYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P--- 83 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEE-CSSCCCCEEECTTSSE---EEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S---
T ss_pred CCCCeEEEEEECCCCcEEEeeeEe-cCCCCceEEECCCCCE---EEEeecCCCeEEEEEecCCCCceeecccccc-C---
Confidence 468999999995 33321111111 2334667889998876 5555554 899999987 4442 233332 2
Q ss_pred CCCeEEEEEcCCCCEEEEe-cCCCeEEEcC
Q psy17135 78 DESILDVAFHPSKPFIASA-GADGLAKVFV 106 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~-~~d~~i~iwd 106 (106)
..+..++|+|++..++++ ..++.+.+||
T Consensus 84 -~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 84 -GSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp -SCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -CCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 467889999999976555 4588899985
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.01 E-value=3.1e-09 Score=69.51 Aligned_cols=90 Identities=9% Similarity=-0.045 Sum_probs=60.5
Q ss_pred CCceEEEEeCccCceeeeccc-CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC------
Q psy17135 5 PSSVIYIWTLLELQTYARNDC-PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF------ 77 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~------ 77 (106)
.++.|.+||+.+++. ..+.. ..+...+..+.|+|++.. ++.++. +.|++||+.+++.......+....
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~---la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQ---LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTC---EEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCE---EEEEEC-CeEEEEECCCCceEEEecCCCCCceECccc
Confidence 358899999998876 22222 222223567889999988 666664 789999999887654444333000
Q ss_pred --------CCCeEEEEEcCCCCEEEEecCC
Q psy17135 78 --------DESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 78 --------~~~v~~~~~~~~~~~~~s~~~d 99 (106)
...+..++||||++.|+.++.+
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 0123789999999999888754
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.99 E-value=3.3e-09 Score=68.15 Aligned_cols=88 Identities=9% Similarity=-0.044 Sum_probs=66.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCCCCe
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
++.+.+||+.+++....... .. ....|+|++.. +++++.+ ..|++||+.+++. ..+..+. ..+
T Consensus 131 ~~~~~l~d~~~g~~~~l~~~---~~--~~~~~spDG~~---la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~----~~~ 197 (582)
T 3o4h_A 131 EDRVALYALDGGGLRELARL---PG--FGFVSDIRGDL---IAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGE----GSF 197 (582)
T ss_dssp SSCEEEEEEETTEEEEEEEE---SS--CEEEEEEETTE---EEEEEEEETTEEEEEEEETTTCCC-EEECCSS----CEE
T ss_pred CCCceEEEccCCcEEEeecC---CC--ceEEECCCCCE---EEEEEEcCCCCeEEEEEcCCCCCc-eEeecCC----Ccc
Confidence 34455999998876333222 11 67889999988 6766555 7799999988774 3666666 678
Q ss_pred EEEEEcCCCCEEEEecCCC--eEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADG--LAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~--~i~iwd 106 (106)
..++||||++.++++..++ .|++||
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEc
Confidence 9999999999999888888 788886
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.99 E-value=2e-09 Score=73.37 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=69.6
Q ss_pred CceEE-EEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 6 SSVIY-IWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
++.+. +||+.+++.. .+. .+......+.|+|.+.. +++++.++.+++||+.+++.......|. ..+..+
T Consensus 357 ~~~l~~~~d~~~~~~~-~l~--~~~~~~~~~~~SpDG~~---la~~~~~~~v~~~d~~tg~~~~~~~~~~----~~v~~~ 426 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAE-KFE--ENLGNVFAMGVDRNGKF---AVVANDRFEIMTVDLETGKPTVIERSRE----AMITDF 426 (1045)
T ss_dssp TEEEEEEEETTTCCEE-ECC--CCCCSEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECSS----SCCCCE
T ss_pred CCceEEEEECCCCCce-Eec--CCccceeeeEECCCCCE---EEEECCCCeEEEEECCCCceEEeccCCC----CCccce
Confidence 44677 8898877652 222 23344566889998887 7888999999999999988766665676 788999
Q ss_pred EEcCCCCEEEEecCCC----------eEEEcC
Q psy17135 85 AFHPSKPFIASAGADG----------LAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~----------~i~iwd 106 (106)
+|+|+++++++++.++ .+++||
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 9999999988877643 888885
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.98 E-value=1.7e-09 Score=64.60 Aligned_cols=93 Identities=5% Similarity=0.000 Sum_probs=63.1
Q ss_pred CceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccCCCC
Q psy17135 6 SSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKFDES 80 (106)
Q Consensus 6 d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~ 80 (106)
++.|.+|++. +++.........+. ....+.|+|.+... ++++..++.|.+||+.+ .+....+..+ ..
T Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----~~ 130 (343)
T 1ri6_A 59 EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFV--FVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-----DG 130 (343)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEE--EEEETTTTEEEEEEEETTEEEEEEEEECCC-----TT
T ss_pred CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEE--EEEecCCCeEEEEECCCCccccccccccCC-----CC
Confidence 4899999997 55532222221122 56778899988762 35556688999999943 3334444333 46
Q ss_pred eEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
+..++|+|++..+++++ .++.+.+||
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 78899999998776666 889999985
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.97 E-value=8.7e-10 Score=72.23 Aligned_cols=93 Identities=11% Similarity=0.096 Sum_probs=66.6
Q ss_pred CCceEEEEeCccCceeeecccCCC-CCCCCeeEeeeCCCCceEEEeeCC---------CCcEEEeeCCCccchheecccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPEL-NSEPPACQTIPSSNISLFDSRPGH---------DCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~---------d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
.|++|++||+.+++.......... ...+....|+|++.. ++.++. ++.+++||+.+++.+.... -.
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~---la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~ 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQF---VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LP 109 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSE---EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CC
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCe---EEEEecCceeEEeecceEEEEEECCCCcccccee-cC
Confidence 588999999999887443332100 012677899999887 565554 6899999999887631111 12
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+..++|||||+.|+.+. ++.|++|+
T Consensus 110 ----~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 110 ----RPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp ----SSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ----cccccceECCCCCEEEEEE-CCeEEEEe
Confidence 4678899999999998885 78999986
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.95 E-value=7.9e-09 Score=62.31 Aligned_cols=99 Identities=8% Similarity=0.070 Sum_probs=63.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCC-cc--chheeccccc-----
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDN-KT--CVQEITAHRK----- 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~-~~--~~~~~~~~~~----- 75 (106)
.++.|.+||+.+++.........+......+.++|.+.. +++++ .++.+.+|++.. +. .+..+.....
T Consensus 61 ~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~---l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~ 137 (347)
T 3hfq_A 61 DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQL---VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPE 137 (347)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTE---EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTT
T ss_pred CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCE---EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCcc
Confidence 368999999977664222221112345667889998887 45544 789999999963 32 2222221110
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.....+..++|+|+++.+++...++.+.+|+
T Consensus 138 ~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 138 QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp CSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 0013588899999999777777888999885
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.94 E-value=4.4e-09 Score=71.74 Aligned_cols=92 Identities=9% Similarity=-0.050 Sum_probs=68.6
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----------CcEEEeeCCCccchheeccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----------CSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~v~iwd~~~~~~~~~~~~~ 73 (106)
..++.|++||+.+++....... +...+..+.|+|.+.. ++.++.+ +.+++||+.+++ ...+..+
T Consensus 397 ~~~~~v~~~d~~tg~~~~~~~~--~~~~v~~~~~SpDG~~---la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~ 470 (1045)
T 1k32_A 397 NDRFEIMTVDLETGKPTVIERS--REAMITDFTISDNSRF---IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTE 470 (1045)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC--SSSCCCCEEECTTSCE---EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCS
T ss_pred CCCCeEEEEECCCCceEEeccC--CCCCccceEECCCCCe---EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCC
Confidence 3567899999999887443322 3444577899999887 5555443 489999999877 5666666
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
. ..+..++|+|+++.++.++.++....|
T Consensus 471 ~----~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 471 N----SHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp S----SBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred C----cccCCceEcCCCCEEEEEecccCCcCc
Confidence 6 678889999999998888876665555
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.93 E-value=2e-08 Score=59.97 Aligned_cols=92 Identities=7% Similarity=-0.002 Sum_probs=65.4
Q ss_pred CCCceEEEEeCccCce-eeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCC-C--cEEEeeCCCccchheeccccccCC
Q psy17135 4 VPSSVIYIWTLLELQT-YARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHD-C--SIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d-~--~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
..++.|.+||+.+++. ...... ...... +.|+|.+.. +++...+ + .|.+||+.+++.+..+..+
T Consensus 59 ~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~---l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----- 127 (331)
T 3u4y_A 59 DFCQTLVQIETQLEPPKVVAIQE---GQSSMADVDITPDDQF---AVTVTGLNHPFNMQSYSFLKNKFISTIPIP----- 127 (331)
T ss_dssp STTCEEEEEECSSSSCEEEEEEE---CSSCCCCEEECTTSSE---EEECCCSSSSCEEEEEETTTTEEEEEEECC-----
T ss_pred CCCCeEEEEECCCCceeEEeccc---CCCCccceEECCCCCE---EEEecCCCCcccEEEEECCCCCeEEEEECC-----
Confidence 3477999999998886 333333 223445 788898887 5655444 3 8999999998877766543
Q ss_pred CCeEEEEEcCCCCEE-EEecCCCe-EEEcC
Q psy17135 79 ESILDVAFHPSKPFI-ASAGADGL-AKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~-~s~~~d~~-i~iwd 106 (106)
.....++|+|+++.+ ++...++. +.+|+
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred CCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 467899999999854 55555577 88774
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.93 E-value=6.5e-10 Score=71.37 Aligned_cols=89 Identities=9% Similarity=0.095 Sum_probs=67.7
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
+.|.+||+.+++.. .+. .+........|+|++.. ++++..++ .|.+||+.+++.. .+..+. ..+..+
T Consensus 175 ~~i~~~d~~~g~~~-~l~--~~~~~~~~~~~SpDG~~---l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~----~~~~~~ 243 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFD--SGEGSFSSASISPGMKV---TAGLETAREARLVTVDPRDGSVE-DLELPS----KDFSSY 243 (582)
T ss_dssp EEEEEEETTTCCCE-EEC--CSSCEEEEEEECTTSCE---EEEEECSSCEEEEEECTTTCCEE-ECCCSC----SHHHHH
T ss_pred eEEEEEcCCCCCce-Eee--cCCCccccceECCCCCE---EEEccCCCeeEEEEEcCCCCcEE-EccCCC----cChhhh
Confidence 67999999988763 222 22334566899999888 67777788 8999999988766 555554 445555
Q ss_pred E--------EcCCCCEEEEecCCCeEEEcC
Q psy17135 85 A--------FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~--------~~~~~~~~~s~~~d~~i~iwd 106 (106)
. |+|++..+++++.++++++|+
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 5 999998899999999999984
No 152
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.92 E-value=9.8e-09 Score=67.84 Aligned_cols=92 Identities=9% Similarity=0.023 Sum_probs=65.7
Q ss_pred CceEEEEeCccCceeeecccCCCCC---CCCeeEeeeCCCCceEEEeeCCC---------CcEEEeeCCCccchheeccc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNS---EPPACQTIPSSNISLFDSRPGHD---------CSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~d---------~~v~iwd~~~~~~~~~~~~~ 73 (106)
|++|++||+.+++....+....... ......|+|++.. ++.++.+ +.+.+||+.+++.. .+..+
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~---l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~ 110 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF---ILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERI 110 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE---EEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCC
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE---EEEEECCeeeEEEccceEEEEEECCCCcEE-EcccC
Confidence 7899999999998754443322111 1122577898887 5665554 55679999988754 45556
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. ..+...+|||||+.|+.+ .++.|++|+
T Consensus 111 ~----~~~~~~~~SPdG~~la~~-~~~~i~~~~ 138 (740)
T 4a5s_A 111 P----NNTQWVTWSPVGHKLAYV-WNNDIYVKI 138 (740)
T ss_dssp C----TTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred C----CcceeeEECCCCCEEEEE-ECCeEEEEE
Confidence 6 689999999999999888 468888875
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.92 E-value=4e-09 Score=68.98 Aligned_cols=86 Identities=8% Similarity=-0.018 Sum_probs=58.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-----ccchheecccccc---
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-----KTCVQEITAHRKK--- 76 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-----~~~~~~~~~~~~~--- 76 (106)
.++.|++||+.+++....... ......+.|+|.+.. ++.+ .++.|.+||+.+ ++.......+...
T Consensus 99 ~~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~SpdG~~---la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFDT---NEETASLDFSPVGDR---VAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp ETTEEEEEETTTTEEEEEECC---TTCCTTCEECTTSSE---EEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred ECCEEEEEECCCCceEEccCC---cccccCCcCCCCCCE---EEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 358899999998876332222 334667889999887 5554 678999999988 7654433333200
Q ss_pred -------CCCCeEEEEEcCCCCEEEEec
Q psy17135 77 -------FDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 77 -------~~~~v~~~~~~~~~~~~~s~~ 97 (106)
....+..+.|+||++.|++++
T Consensus 172 g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp SSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred ccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 001247899999999998887
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=3.5e-08 Score=57.57 Aligned_cols=92 Identities=9% Similarity=0.025 Sum_probs=61.5
Q ss_pred CCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeC--CCccchheeccccccCCC
Q psy17135 5 PSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNL--DNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~--~~~~~~~~~~~~~~~~~~ 79 (106)
.++.|.+||+.+ ++....... ++...+..+.|+|.+.. +++++ .++..++|.+ .+++ ...+..+ .
T Consensus 60 ~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-----~ 129 (297)
T 2ojh_A 60 SEGLLYRLSLAGDPSPEKVDTG-FATICNNDHGISPDGAL---YAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-----L 129 (297)
T ss_dssp ETTEEEEEESSSCCSCEECCCT-TCCCBCSCCEECTTSSE---EEEEECTTTSSCEEEEEETTCCC-CEECCSS-----S
T ss_pred cCCeEEEEeCCCCCCceEeccc-cccccccceEECCCCCE---EEEEEeCCCCcceEEEEECCCCc-eEEeecC-----C
Confidence 367899999998 776333322 12234566889998887 56665 4455666654 4443 3444433 3
Q ss_pred CeEEEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIA-SAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~-s~~~d~~i~iwd 106 (106)
.+..++|+|++..++ +++.++.+++|+
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYS 157 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEE
Confidence 588899999999876 788889888874
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.85 E-value=1.3e-08 Score=66.78 Aligned_cols=84 Identities=15% Similarity=0.078 Sum_probs=58.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCe--
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESI-- 81 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v-- 81 (106)
.++.|++||+.+++.+..... ...+..+.|+|++.. ++.+. ++.|++|++.+++..... .++. ..+
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~---la~~~-~~~i~~~~~~~g~~~~l~~~~~~----~~v~~ 156 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSK---LAYVY-QNNIYLKQRPGDPPFQITFNGRE----NKIFN 156 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTC---EEEEE-TTEEEEESSTTSCCEECCCCCBT----TTEEE
T ss_pred cceEEEEEECCCCccccceec---CcccccceECCCCCE---EEEEE-CCeEEEEeCCCCCcEEEecCCCc----CCeEc
Confidence 368999999999886321222 123566899999998 56664 689999999887654322 1222 222
Q ss_pred ---------------EEEEEcCCCCEEEEecCC
Q psy17135 82 ---------------LDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 82 ---------------~~~~~~~~~~~~~s~~~d 99 (106)
..++||||++.|++++.|
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 479999999999988755
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.84 E-value=4.7e-08 Score=58.92 Aligned_cols=96 Identities=8% Similarity=-0.021 Sum_probs=69.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee------CCCCceEEEeeCCCCcEEEeeCCCccchheec---ccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP------SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHR 74 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~ 74 (106)
..++.|++||..+++.+..+...........+.+.| .+.. .++...+..+++|+..+++.+..+. .+.
T Consensus 215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~---~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~ 291 (329)
T 3fvz_A 215 RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP---YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF 291 (329)
T ss_dssp TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC---CTTCSCCCCEEEEETTTCCEEEEECCSSSCC
T ss_pred CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE---EeccCCCcEEEEEEcCCCeEEEEEcCCCCcc
Confidence 356789999998888876665433333344466666 2322 2344556689999999998877763 333
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.....++++|++.++++...+++|++|+
T Consensus 292 ----~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 292 ----DMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp ----SSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred ----CCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 6789999999998899999999999885
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.83 E-value=8.3e-09 Score=67.47 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=66.5
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC-----cEEEeeCCCccchheecccc-ccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC-----SIRLWNLDNKTCVQEITAHR-KKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-~~~~ 78 (106)
.+..|.+||+.+++.........+...+..+.|+|.+.. +++++.++ .|.+||+.+++....+.... ....
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI---LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE---EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE---EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 567899999998876333322223334566899998887 56655554 89999999884444433222 0000
Q ss_pred CCeEEEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHP--SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~--~~~~~~s~~~d~~i~iwd 106 (106)
..+..+.|+| ++.++++++.++.+++|+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 1235689999 999999999999888873
No 158
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.82 E-value=1.3e-08 Score=63.11 Aligned_cols=85 Identities=13% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|++||+.+......... +...+..+.+.+. . ++.+..||.+.+||+.++.... +. ..|.++
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~~--~~~~v~~i~~~~p--~---~av~~~dG~L~v~dl~~~~~~~----~~----~~Vs~v 168 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVTS--FEKPVFQLKNVNN--T---LVILNSVNDLSALDLRTKSTKQ----LA----QNVTSF 168 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEEE--CSSCEEEEEECSS--E---EEEEETTSEEEEEETTTCCEEE----EE----ESEEEE
T ss_pred cCCcEEEEEchhhhccCccce--eecceeeEEecCC--C---EEEEECCCCEEEEEccCCcccc----cc----CCceEE
Confidence 568999999987664332222 2223333444433 3 5788899999999999776532 34 689999
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+|||.| ++.+..||++++|+
T Consensus 169 ~WSpkG--~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 169 DVTNSQ--LAVLLKDRSFQSFA 188 (388)
T ss_dssp EECSSE--EEEEETTSCEEEEE
T ss_pred EEcCCc--eEEEEcCCcEEEEc
Confidence 999999 77888999998873
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.75 E-value=4.5e-08 Score=58.65 Aligned_cols=93 Identities=6% Similarity=-0.041 Sum_probs=62.3
Q ss_pred CCCceEEEEeCccCceeeecccCCC----CCCCCeeEeeeCCCCceEEEeeCCC------------CcEEEeeCCCccch
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPEL----NSEPPACQTIPSSNISLFDSRPGHD------------CSIRLWNLDNKTCV 67 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~d------------~~v~iwd~~~~~~~ 67 (106)
..++.|.+||+.+++.......... ......+.|+|.+.. +++++.+ +.+.+||+.+++..
T Consensus 62 ~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 62 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE---VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE---EEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 3578999999999887655544211 112456788998877 5666544 89999999886543
Q ss_pred heec--cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 68 QEIT--AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 68 ~~~~--~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+. .+. ..+.+++|+|++. ++.++. .+.+||
T Consensus 139 ~~~~~~~~~----~~~~~~~~s~dg~-l~~~~~--~i~~~d 172 (349)
T 1jmx_B 139 KPVRTFPMP----RQVYLMRAADDGS-LYVAGP--DIYKMD 172 (349)
T ss_dssp CCSEEEECC----SSCCCEEECTTSC-EEEESS--SEEEEC
T ss_pred ceeeeccCC----CcccceeECCCCc-EEEccC--cEEEEe
Confidence 3222 233 4678889999999 444443 377775
No 160
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.75 E-value=3.9e-08 Score=64.59 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=57.5
Q ss_pred ceEEEEeCccC---ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-------
Q psy17135 7 SVIYIWTLLEL---QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK------- 76 (106)
Q Consensus 7 ~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~------- 76 (106)
+.|.+||+.++ +. ..+.. +......+.|+|++.. ++.++ ++.|.+||+.+++.......+...
T Consensus 129 ~~i~~~d~~~~~~~~~-~~l~~--~~~~~~~~~~SPDG~~---la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~ 201 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAV-RQLTH--GEGFATDAKLSPKGGF---VSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAE 201 (741)
T ss_dssp TEEEEEESSSCSTTSC-CBCCC--SSSCEEEEEECTTSSE---EEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCC
T ss_pred CcEEEEECCCCCcceE-EEccc--CCcccccccCCCCCCE---EEEEe-CCcEEEEecCCCCEEEeccCCccceeccccc
Confidence 67999999987 43 22222 2334566899999887 56665 468999999887654433322200
Q ss_pred -----CCCCeEEEEEcCCCCEEEEecCCC
Q psy17135 77 -----FDESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 77 -----~~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
....+..++||||++.|+.++.|+
T Consensus 202 ~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 202 FVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp HHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred eeeeeccccccceEECCCCCEEEEEEEcC
Confidence 001247789999999998887654
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.74 E-value=7.8e-08 Score=57.96 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=61.5
Q ss_pred CCCceEEEEeCcc--CceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheecc
Q psy17135 4 VPSSVIYIWTLLE--LQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITA 72 (106)
Q Consensus 4 ~~d~~i~iwd~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~ 72 (106)
..++.|.+|++.. ++........... .....+.|+|.+... +++...++.|.+|++... +.+..+..
T Consensus 206 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l--~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 206 ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL--YVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE--EEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE--EEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 4567889999874 4431111111001 124457888888762 366667899999998732 33444444
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEecC-CCeEEEc
Q psy17135 73 HRKKFDESILDVAFHPSKPFIASAGA-DGLAKVF 105 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s~~~-d~~i~iw 105 (106)
+. ..+..++|+|+++++++++. ++.+.+|
T Consensus 284 ~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 284 EG----DFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp SS----SCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CC----CCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 43 56789999999998776664 5889888
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.70 E-value=1.7e-07 Score=56.80 Aligned_cols=94 Identities=9% Similarity=0.049 Sum_probs=61.2
Q ss_pred CCceEEEEeCccCceeee--ccc-CCCCCCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCC--Ccc--chheecccccc
Q psy17135 5 PSSVIYIWTLLELQTYAR--NDC-PELNSEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLD--NKT--CVQEITAHRKK 76 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~--~~~--~~~~~~~~~~~ 76 (106)
.++.|.+||+.+++.... ... ..+......+.|+|.+... +++... ++.+.+|++. +++ .+..+.. .
T Consensus 231 ~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l--~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g-- 305 (361)
T 3scy_A 231 IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL--YASNRLKADGVAIFKVDETNGTLTKVGYQLT-G-- 305 (361)
T ss_dssp TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE--EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S--
T ss_pred CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE--EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C--
Confidence 578899999987654221 211 1112233468889988762 244444 5889999986 344 2333333 2
Q ss_pred CCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135 77 FDESILDVAFHPSKPFIASAG-ADGLAKVF 105 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw 105 (106)
..+..++|+|+++++++++ .++.+.+|
T Consensus 306 --~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 306 --IHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp --SCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred --CCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 5678899999999877766 67888886
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.70 E-value=1.9e-07 Score=56.63 Aligned_cols=99 Identities=8% Similarity=0.084 Sum_probs=61.6
Q ss_pred CCCceEEEEeCccCce------e------eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hhe
Q psy17135 4 VPSSVIYIWTLLELQT------Y------ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQE 69 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~ 69 (106)
..++.|.+|++..... + ...... .......+.|+|.+... +++...++.|.+|++.+++. +..
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~spdg~~l--~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA-PGSGPRHLIFNSDGKFA--YLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-TTCCEEEEEECTTSSEE--EEEETTTCEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecC-CCCCCeEEEEcCCCCEE--EEEcCCCCeEEEEEecCCceEEeEE
Confidence 3567899998875431 1 111221 12335568899988762 34555789999999987653 222
Q ss_pred eccccccCCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 70 ITAHRKKFDESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
+..... +......++|+|++++++.+.. ++.+.+|+
T Consensus 251 ~~~~~~-~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 251 VAADTV-NAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp EESCSS-CCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred EecCCC-CCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 222110 0145679999999998765554 48899885
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.66 E-value=3.2e-08 Score=60.57 Aligned_cols=96 Identities=11% Similarity=0.001 Sum_probs=67.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH 73 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~ 73 (106)
+.|+.|.+||..+++.+..+... . .. .+.++|.+.. +++++ .++.|.+||..+.+.+..+...
T Consensus 28 ~~d~~v~v~D~~t~~~~~~i~~g--~-~p-~i~~spdg~~---lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGMVPTA--F-NG-HVQVSNDGKK---IYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP 100 (361)
T ss_dssp GGGCEEEEEETTTCCEEEEEECC--E-EE-EEEECTTSSE---EEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred cccCeEEEEECCCCeEEEEecCC--C-CC-ceEECCCCCE---EEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence 45789999999999886555442 2 23 7788888877 44443 3567999999988877777543
Q ss_pred ccc--CCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 74 RKK--FDESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 74 ~~~--~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
... .......++++|++++++++.. ++.|.+||
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEE
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEE
Confidence 210 0134567899999999887763 57888875
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.61 E-value=8.7e-07 Score=52.08 Aligned_cols=94 Identities=10% Similarity=0.141 Sum_probs=61.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC-cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC-SIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
.++.|++||.. ++.+..+....+......+.+.+.+.. +++...++ .|.+|+. +++.+..+..+.. ...+..
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l---~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~--~~~~~~ 255 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEI---LIADNHNNFNLTIFTQ-DGQLISALESKVK--HAQCFD 255 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCE---EEEECSSSCEEEEECT-TSCEEEEEEESSC--CSCEEE
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCE---EEEeCCCCEEEEEECC-CCCEEEEEcccCC--CCccee
Confidence 46788899874 444344433211123445667776644 56776665 9999996 4665666654431 134788
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++++|++.++++ +.+++|++|+
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEE
T ss_pred EEECCCCcEEEE-CCCCeEEEEE
Confidence 999999988777 4689999985
No 166
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.57 E-value=5.6e-07 Score=58.33 Aligned_cols=92 Identities=11% Similarity=-0.031 Sum_probs=68.7
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--CccchheeccccccCCCCe
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~v 81 (106)
..+++|.++|..+++.+..+... .....+.++|.+.. +++++.++.|.+||+. +.+.+..+... ...
T Consensus 174 ~~~~~V~viD~~t~~v~~~i~~g---~~p~~v~~SpDGr~---lyv~~~dg~V~viD~~~~t~~~v~~i~~G-----~~P 242 (567)
T 1qks_A 174 RDAGQIALIDGSTYEIKTVLDTG---YAVHISRLSASGRY---LFVIGRDGKVNMIDLWMKEPTTVAEIKIG-----SEA 242 (567)
T ss_dssp TTTTEEEEEETTTCCEEEEEECS---SCEEEEEECTTSCE---EEEEETTSEEEEEETTSSSCCEEEEEECC-----SEE
T ss_pred CCCCeEEEEECCCCeEEEEEeCC---CCccceEECCCCCE---EEEEcCCCeEEEEECCCCCCcEeEEEecC-----CCC
Confidence 46789999999999987666542 23446788888877 6677889999999996 66767666543 356
Q ss_pred EEEEEc----CCCCEEEEec-CCCeEEEcC
Q psy17135 82 LDVAFH----PSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~----~~~~~~~s~~-~d~~i~iwd 106 (106)
..++|+ |++++++.++ .++.+.++|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 789999 6999876655 457777765
No 167
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.56 E-value=7.8e-07 Score=58.53 Aligned_cols=86 Identities=12% Similarity=0.007 Sum_probs=57.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-------------EEEeeCCCccch----h
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-------------IRLWNLDNKTCV----Q 68 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-------------v~iwd~~~~~~~----~ 68 (106)
+.+|++||+.+++.+..... .......+.|+|++.. |+.++.+.. |++|++.+++.. .
T Consensus 146 ~~~i~v~dl~tg~~~~~~~~--~~~~~~~~~wspDg~~---l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSKVDVI--EGGKYATPKWTPDSKG---FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp CCEEEEEETTTCCBCSSCCB--SCCTTCCCEECTTSSE---EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred eEEEEEEECCCCCCcCCccc--CcccccceEEecCCCE---EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 46899999999886311111 1222256889999887 566666554 999999887632 2
Q ss_pred eeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135 69 EITAHRKKFDESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
....+. ..+..+.|+|++++++.++.++
T Consensus 221 ~~~~~~----~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 221 ERTGDP----TTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CCCCCT----TCEEEEEECTTSCCEEEEEEET
T ss_pred ecCCCC----EEEEEEEECCCCCEEEEEEeCC
Confidence 222233 5788999999999887766554
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.56 E-value=1.1e-06 Score=53.80 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=59.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~ 83 (106)
+++|.+||+.+++.+..+... . ...+.++|.+.. +++++. +.|.+||..++ +.++.+.... .....
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~--~--p~~ia~spdg~~---l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G----~~P~~ 352 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGR--D--ALSMTIDQQRNL---MLTLDG-GNVNVYDISQPEPKLLRTIEGAA----EASLQ 352 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECT--T--CCEEEEETTTTE---EEEECS-SCEEEEECSSSSCEEEEEETTSC----SSEEE
T ss_pred CceEEEEECCCCcEEEEEecC--C--eeEEEECCCCCE---EEEeCC-CeEEEEECCCCcceeeEEeccCC----CCcEE
Confidence 458999999999987777663 2 677899998886 566666 99999999999 8888875555 67788
Q ss_pred EEEcCCCC
Q psy17135 84 VAFHPSKP 91 (106)
Q Consensus 84 ~~~~~~~~ 91 (106)
+.++|+|.
T Consensus 353 ~~~~p~G~ 360 (361)
T 2oiz_A 353 VQFHPVGG 360 (361)
T ss_dssp EEECCCSC
T ss_pred EEecCCCC
Confidence 99999875
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.56 E-value=1.2e-06 Score=53.40 Aligned_cols=96 Identities=10% Similarity=-0.039 Sum_probs=62.4
Q ss_pred CCceEEEEeCc-cCceeeecccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC-Cccch--heecc--cccc
Q psy17135 5 PSSVIYIWTLL-ELQTYARNDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD-NKTCV--QEITA--HRKK 76 (106)
Q Consensus 5 ~d~~i~iwd~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~-~~~~~--~~~~~--~~~~ 76 (106)
.++++.+|++. +++........ .+......+.|+|.+... +++...++.|.+|++. +++.. ..+.. +.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l--~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g-- 192 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL--YSADLTANKLWTHRKLASGEVELVGSVDAPDPG-- 192 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE--EEEETTTTEEEEEEECTTSCEEEEEEEECSSTT--
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE--EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC--
Confidence 58899999997 45543222210 122345668899988762 2334446789999998 66542 22321 23
Q ss_pred CCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 77 FDESILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
..+..++|+|+++.+++++ .++.+.+|+
T Consensus 193 --~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 193 --DHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp --CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --CCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 5788999999999876665 467888873
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.50 E-value=3.6e-06 Score=49.83 Aligned_cols=92 Identities=8% Similarity=-0.116 Sum_probs=68.3
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|.+||.++++.+..+..... .....+.+.|.+.. +++ .++.|..||. +++.+..+..+.. ..+..
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~i---lvs--~~~~V~~~d~-~G~~~W~~~~~~~---~~~~~ 81 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEI---LFS--YSKGAKMITR-DGRELWNIAAPAG---CEMQT 81 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCE---EEE--CBSEEEEECT-TSCEEEEEECCTT---CEEEE
T ss_pred CCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCE---EEe--CCCCEEEECC-CCCEEEEEcCCCC---ccccc
Confidence 5689999999999999777766321 24566777887765 563 4678999999 7888888876431 46788
Q ss_pred EEEcCCCCEEEEecC-CCeEEEc
Q psy17135 84 VAFHPSKPFIASAGA-DGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~-d~~i~iw 105 (106)
+.+.+++..+++.+. ++.+..+
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEE
Confidence 889999999888776 6666554
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.49 E-value=6e-06 Score=49.76 Aligned_cols=98 Identities=12% Similarity=0.006 Sum_probs=66.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheecccc-----ccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHR-----KKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~-----~~~~ 78 (106)
+++.|.+||..+++.+...... +......+.+.+.+.. +++...++.|+.|+..... .+..+.... ..+.
T Consensus 67 ~~~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~~g~l---~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 67 EEDTILVIDPNNAEILQSSGKN-LFYLPHGLSIDTDGNY---WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CSCCEEEECTTTCCEEEEECTT-TCSSEEEEEECTTSCE---EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred cCCcEEEEECCCCeEEeccCCC-ccCCceEEEECCCCCE---EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 4578999999988875444321 1223455777776664 6888888999999986442 444442100 0011
Q ss_pred CCeEEEEEcC-CCCEEEEec-CCCeEEEcC
Q psy17135 79 ESILDVAFHP-SKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~-~~~~~~s~~-~d~~i~iwd 106 (106)
.....++++| ++.++++.+ .++.|++|+
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred CCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 4688999999 888888886 689998885
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.46 E-value=8.2e-07 Score=54.15 Aligned_cols=93 Identities=10% Similarity=0.112 Sum_probs=58.9
Q ss_pred eEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-------------CCCcEEEeeCC-Cccchheecc
Q psy17135 8 VIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-------------HDCSIRLWNLD-NKTCVQEITA 72 (106)
Q Consensus 8 ~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------------~d~~v~iwd~~-~~~~~~~~~~ 72 (106)
.|.+||+. +++......... ......+.++|.+... ++++++ .++.+.+|++. +++....+..
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~-~g~~~~~~~spdg~~l-~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~ 138 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPI-GGHPRANDADTNTRAI-FLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN 138 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEC-CSSGGGGCTTSCCEEE-EEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeec-CCCCccEEECCCCCEE-EEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee
Confidence 78999997 676533222111 1123446677776631 134543 68899999997 4554433332
Q ss_pred ----ccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 73 ----HRKKFDESILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 73 ----~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
+. ..+..++|+|+++.++++. .++.|++||
T Consensus 139 ~~~~~~----~~~~~~~~spdG~~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 139 YEYQEN----TGIHGMVFDPTETYLYSADLTANKLWTHR 173 (365)
T ss_dssp EECCTT----CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEeCCC----CcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 22 6789999999999877654 467888885
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.45 E-value=1.3e-06 Score=56.79 Aligned_cols=90 Identities=9% Similarity=0.074 Sum_probs=59.5
Q ss_pred ceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--------CcEEEeeCC-Ccc--chhe
Q psy17135 7 SVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--------CSIRLWNLD-NKT--CVQE 69 (106)
Q Consensus 7 ~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--------~~v~iwd~~-~~~--~~~~ 69 (106)
..|.+||+.+ ++. ..+. ..+........|+|++.. ++..+.+ ..|.+||+. +++ ....
T Consensus 161 ~~i~~~~~~~~~~~~~~~~-~~l~-~~~~~~~~~~~~SpDG~~---la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAV-RELS-DDAHRFVTGPRLSPDGRQ---AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGS-EESS-CSCSSEECCCEECTTSSE---EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCce-eEEE-ecCCCcccCceECCCCCE---EEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5899999987 554 2222 012233455789998887 5544433 479999998 561 2333
Q ss_pred ec-cccccCCCCeEEEEEcCCCCEEEEecCCC--eEEEc
Q psy17135 70 IT-AHRKKFDESILDVAFHPSKPFIASAGADG--LAKVF 105 (106)
Q Consensus 70 ~~-~~~~~~~~~v~~~~~~~~~~~~~s~~~d~--~i~iw 105 (106)
+. .+. ..+..+.|+|++++++++..++ .+.+|
T Consensus 236 l~~~~~----~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 236 LLGGPE----EAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp EEEETT----BCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred eCCCCC----ceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 33 334 6789999999999888888888 44444
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.41 E-value=2.2e-06 Score=56.53 Aligned_cols=89 Identities=2% Similarity=-0.194 Sum_probs=59.3
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc----------------EEEeeCCCccchhee-
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS----------------IRLWNLDNKTCVQEI- 70 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~----------------v~iwd~~~~~~~~~~- 70 (106)
+|++||+.+++....... ......+.|+|++.. |+.++.++. |.+|++.+++....+
T Consensus 152 ~i~v~d~~tg~~~~~~~~---~~~~~~~~wspDg~~---l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v 225 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLE---RVKFSCMAWTHDGKG---MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC 225 (710)
T ss_dssp EEEEEETTTTEEEEEEEE---EECSCCEEECTTSSE---EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEECCCCCCCccccc---CcccceEEEEeCCCE---EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence 899999999887443221 122456889998887 555555444 999999877632222
Q ss_pred -cc--ccccCCCCeEEEEEcCCCCEEEEecC-----CCeEEEcC
Q psy17135 71 -TA--HRKKFDESILDVAFHPSKPFIASAGA-----DGLAKVFV 106 (106)
Q Consensus 71 -~~--~~~~~~~~v~~~~~~~~~~~~~s~~~-----d~~i~iwd 106 (106)
.. +. ..+..+.|+|++++++.++. +..+++||
T Consensus 226 ~~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 226 AEFPDEP----KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp ECCTTCT----TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred eccCCCC----eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 21 23 45788999999998776654 45677664
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.39 E-value=9.1e-06 Score=47.71 Aligned_cols=95 Identities=8% Similarity=0.138 Sum_probs=62.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|.+||.. ++.+..+....+......+.+.+.+.. +++...++.|++|+.. ++.+..+..+.. ......+
T Consensus 140 ~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~-g~~~~~~~~~g~--~~~p~~i 212 (286)
T 1q7f_A 140 KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEI---FISDNRAHCVKVFNYE-GQYLRQIGGEGI--TNYPIGV 212 (286)
T ss_dssp TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEE---EEEEGGGTEEEEEETT-CCEEEEESCTTT--SCSEEEE
T ss_pred CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCE---EEEECCCCEEEEEcCC-CCEEEEEccCCc--cCCCcEE
Confidence 46778888864 444334332212223445667776543 6777778999999974 444555533210 1467899
Q ss_pred EEcCCCCEEEEecCCC-eEEEcC
Q psy17135 85 AFHPSKPFIASAGADG-LAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~-~i~iwd 106 (106)
++++++.++++...++ .|.+||
T Consensus 213 ~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 213 GINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp EECTTCCEEEEECSSSCEEEEEC
T ss_pred EECCCCCEEEEeCCCCEEEEEEC
Confidence 9999999988888876 999886
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.35 E-value=9.5e-07 Score=53.82 Aligned_cols=94 Identities=9% Similarity=-0.079 Sum_probs=61.7
Q ss_pred CceEEEEeCccCceeeecccCCCC---CCCCeeEeeeCCCCceEEEeeCC-CCc--EEEeeCCCccchheeccccccCCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELN---SEPPACQTIPSSNISLFDSRPGH-DCS--IRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
+......|..++..+..+...... .......|+|.+.. ++..+. ++. +.+||+.+++.......+. .
T Consensus 9 ~~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~---l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~----~ 81 (388)
T 3pe7_A 9 LTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSK---LLFGGAFDGPWNYYLLDLNTQVATQLTEGRG----D 81 (388)
T ss_dssp CCCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCE---EEEEECTTSSCEEEEEETTTCEEEECCCSSC----B
T ss_pred ccceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCE---EEEEEcCCCCceEEEEeCCCCceEEeeeCCC----C
Confidence 344556777888776665542211 11222678898887 455544 563 7788988887655444444 3
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+....|+|+++.|+.++.++.+++||
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNLMRVD 108 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCeEEEEE
Confidence 444668999999999999888888875
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.34 E-value=1.6e-06 Score=57.49 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=55.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCe----
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESI---- 81 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v---- 81 (106)
+.+.+||+.+++... +. .+........|+|++.. ++.+ .++.|.+|++.++...+.. .++. ..+
T Consensus 92 ~~~~~~d~~~~~~~~-l~--~~~~~~~~~~~SPdG~~---la~~-~~~~i~~~~~~~~~~~~lt~~g~~----~~~~~g~ 160 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EE--RIPNNTQWVTWSPVGHK---LAYV-WNNDIYVKIEPNLPSYRITWTGKE----DIIYNGI 160 (740)
T ss_dssp EEEEEEETTTTEECC-SS--CCCTTEEEEEECSSTTC---EEEE-ETTEEEEESSTTSCCEECCSCCBT----TTEEESB
T ss_pred eEEEEEECCCCcEEE-cc--cCCCcceeeEECCCCCE---EEEE-ECCeEEEEECCCCceEEEcCCCCc----cceecCc
Confidence 667899999988632 22 22334567899999998 5555 4688999999887643321 1221 122
Q ss_pred -------------EEEEEcCCCCEEEEecCC
Q psy17135 82 -------------LDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 82 -------------~~~~~~~~~~~~~s~~~d 99 (106)
..+.|||||+.|+..+.|
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence 348899999998887644
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.25 E-value=1.7e-05 Score=47.91 Aligned_cols=91 Identities=5% Similarity=-0.125 Sum_probs=61.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----------CcEEEeeCCCccchheecccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----------CSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~v~iwd~~~~~~~~~~~~~~ 74 (106)
.++.|.++|+.+++.+...... .....+.+.|.+.. ++++..+ +.|.++|..+++....+....
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g---~~p~~i~~~~dG~l---~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG---IQPTSLVMDKYNKM---WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS---SCBCCCEECTTSEE---EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred CCCEEEEEECCCCeEEEEEEcC---CCccceEEcCCCCE---EEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 3788999999998876655442 22345666665543 4555443 789999999888776665432
Q ss_pred ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
. .....++++|++..+..+.. .+.+||
T Consensus 224 g---~~p~~la~~~d~~~lyv~~~--~v~~~d 250 (328)
T 3dsm_A 224 G---DWPSEVQLNGTRDTLYWINN--DIWRMP 250 (328)
T ss_dssp T---CCCEEEEECTTSCEEEEESS--SEEEEE
T ss_pred C---CCceeEEEecCCCEEEEEcc--EEEEEE
Confidence 1 46789999998888766654 666654
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.23 E-value=3.9e-05 Score=44.47 Aligned_cols=92 Identities=5% Similarity=-0.097 Sum_probs=59.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
++.|.+||..+......... .......+.+.+.+.. +++...++.|.+|+............+. ..+..++
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l---~v~~~~~~~v~~~~~~~~~~~~~~~~~~----~~p~~i~ 240 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPFT--DITAPWGIAVDEAGTV---YVTEHNTNQVVKLLAGSTTSTVLPFTGL----NTPLAVA 240 (270)
T ss_dssp GTEEEEECTTTCCEEECCCS--SCCSEEEEEECTTCCE---EEEETTTSCEEEECTTCSCCEECCCCSC----SCEEEEE
T ss_pred CCEEEEEecCCCceEeeccc--CCCCceEEEECCCCCE---EEEECCCCcEEEEcCCCCcceeeccCCC----CCceeEE
Confidence 46788888776554221111 1123444666665533 5677778889999987554322111222 4688999
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+++.++++...++.|++++
T Consensus 241 ~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 241 VDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEEC
T ss_pred ECCCCCEEEEECCCCEEEEEc
Confidence 999999999999999999875
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.18 E-value=2e-05 Score=47.13 Aligned_cols=69 Identities=10% Similarity=0.004 Sum_probs=50.5
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCC----CeEEEcC
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD----GLAKVFV 106 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d----~~i~iwd 106 (106)
....+.|.+.+.. ++++..++.|.+||..+++.......+. ..+..++++|++.++++...+ +.|.+||
T Consensus 46 ~~~~~~~~~~g~l---~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 46 QLEGLNFDRQGQL---FLLDVFEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CEEEEEECTTSCE---EEEETTTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred cccCcEECCCCCE---EEEECCCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 3455777776653 5778888999999998776544332344 689999999999988887766 6777765
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.13 E-value=1.3e-05 Score=48.17 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=52.0
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC---C--cEEEeeCCCccchheeccccccCCCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD---C--SIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d---~--~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
++.|.+||+.+++.. .+ .......|+|.+.. ++..+.+ + .+.+|++.+++.. .+.... .
T Consensus 42 ~~~l~~~d~~~~~~~-~l------~~~~~~~~SpDg~~---la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~~----~- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARR-FI------ENATMPRISPDGKK---IAFMRANEEKKVSEIWVADLETLSSK-KILEAK----N- 105 (347)
T ss_dssp EEEEEEEETTTCCEE-EE------ESCEEEEECTTSSE---EEEEEEETTTTEEEEEEEETTTTEEE-EEEEES----E-
T ss_pred cceEEEEeCCCCceE-Ec------ccCCCeEECCCCCE---EEEEEeccCCCcceEEEEECCCCceE-EEEcCC----C-
Confidence 678999999887752 22 23556889999887 4444322 3 3777788776643 333344 4
Q ss_pred eEEEEEcCCCCEEEEecC
Q psy17135 81 ILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~ 98 (106)
+..+.|+|+++.|+.++.
T Consensus 106 ~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred ccceeECCCCCEEEEEEc
Confidence 889999999998877653
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.12 E-value=2.5e-05 Score=47.56 Aligned_cols=79 Identities=6% Similarity=-0.130 Sum_probs=52.4
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE--E
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV--A 85 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~--~ 85 (106)
.|.+||+.+++....... +........|+|.+.. |+.++.++.+.+||+.+++.......+. ..+... .
T Consensus 61 ~l~~~d~~~g~~~~lt~~--~~~~~~~~~~spdg~~---l~~~~~~~~l~~~d~~~g~~~~~~~~~~----~~~~~~~~~ 131 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEG--RGDNTFGGFLSPDDDA---LFYVKDGRNLMRVDLATLEENVVYQVPA----EWVGYGTWV 131 (388)
T ss_dssp EEEEEETTTCEEEECCCS--SCBCSSSCEECTTSSE---EEEEETTTEEEEEETTTCCEEEEEECCT----TEEEEEEEE
T ss_pred eEEEEeCCCCceEEeeeC--CCCCccceEEcCCCCE---EEEEeCCCeEEEEECCCCcceeeeechh----hccccccee
Confidence 488889988876333222 2222335679999888 7777778899999999887655444443 333333 3
Q ss_pred EcCCCCEEEE
Q psy17135 86 FHPSKPFIAS 95 (106)
Q Consensus 86 ~~~~~~~~~s 95 (106)
++|++..++.
T Consensus 132 ~~~dg~~l~~ 141 (388)
T 3pe7_A 132 ANSDCTKLVG 141 (388)
T ss_dssp ECTTSSEEEE
T ss_pred ECCCCCeecc
Confidence 4888888763
No 183
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.11 E-value=1.4e-05 Score=49.32 Aligned_cols=92 Identities=7% Similarity=-0.147 Sum_probs=65.9
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-ccc
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RKK 76 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~~ 76 (106)
+|.+.|..+++.+..+... . .. .+.++|.+.. +..+. .++.|.+||..+++.+..+... ..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG--~-~P-~i~~spDg~~---lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA--F-LS-LAVAGHSGSD---FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC--T-TC-EEEECTTSSC---EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEEEeCC--C-CC-ceEECCCCCE---EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 8999999999998877663 2 23 6888998887 34443 4678999999999998888644 100
Q ss_pred C--CCCeEEEEEcCCCCEEEEecC--CCeEEE--cC
Q psy17135 77 F--DESILDVAFHPSKPFIASAGA--DGLAKV--FV 106 (106)
Q Consensus 77 ~--~~~v~~~~~~~~~~~~~s~~~--d~~i~i--wd 106 (106)
+ ......+.++|++++++.+.. +..+.+ +|
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD 155 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEc
Confidence 0 023457889999998877753 456776 65
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.07 E-value=0.00016 Score=43.63 Aligned_cols=91 Identities=7% Similarity=0.033 Sum_probs=62.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--eccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--ITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~v~~ 83 (106)
.+.|.++|..+++.......... .....+.+.|.+.. +..+.. .|.+||..+++.... +.... .....
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~---lyv~~~--~v~~~d~~t~~~~~~~~~~~~~----~~p~g 271 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDT---LYWINN--DIWRMPVEADRVPVRPFLEFRD----TKYYG 271 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCE---EEEESS--SEEEEETTCSSCCSSCSBCCCS----SCEEE
T ss_pred CceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCE---EEEEcc--EEEEEECCCCceeeeeeecCCC----CceEE
Confidence 47899999998887555544211 23566888887776 444443 899999988775321 11112 56788
Q ss_pred EEEcC-CCCEEEEe----cCCCeEEEcC
Q psy17135 84 VAFHP-SKPFIASA----GADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~-~~~~~~s~----~~d~~i~iwd 106 (106)
++++| ++.++++. ..++.|.+||
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 99999 67777777 6788898886
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.06 E-value=8.9e-05 Score=45.76 Aligned_cols=92 Identities=8% Similarity=-0.068 Sum_probs=62.4
Q ss_pred eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-ccc
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RKK 76 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~~ 76 (106)
+|.++|..+++.+..+... . .. .+.++|++.. +..+. .++.|.++|..+.+.+..+... ..+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g--~-~p-~i~~spDg~~---lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG--F-LP-NPVAAHSGSE---FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCCCeEEEEecCC--C-CC-CeEECCCCCE---EEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 8999999999886555432 2 23 7888898887 44443 3678999999988777666433 100
Q ss_pred C--CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 77 F--DESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 77 ~--~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
. ......+.++|++++++.+.. ++.|.++|
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 0 023457899999999887764 46777765
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.05 E-value=1.3e-05 Score=52.20 Aligned_cols=94 Identities=6% Similarity=-0.067 Sum_probs=57.2
Q ss_pred ceEEEEeCc-cCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheecccccc----C
Q psy17135 7 SVIYIWTLL-ELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKK----F 77 (106)
Q Consensus 7 ~~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~----~ 77 (106)
..|.+||+. ++. ....+.. .+........|+|.+.. +++++.++ .+.+||+.+++.......+... -
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~l---~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGSL---IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSCE---EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCeE---EEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 579999998 561 2222222 12234556889998873 67777788 4555666556533222222100 0
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 78 DESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
...+..++|+|++.+++++.. +.+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 011457889999999999988 888887
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.02 E-value=2.3e-05 Score=48.78 Aligned_cols=77 Identities=16% Similarity=0.050 Sum_probs=57.5
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheec---------c
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEIT---------A 72 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~---------~ 72 (106)
..||.|.+||++++.... . ...+.+++|+|.+ ++.|..||.+++|+...+.. .+.+. +
T Consensus 143 ~~dG~L~v~dl~~~~~~~-~-----~~~Vs~v~WSpkG-----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~ 211 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-L-----AQNVTSFDVTNSQ-----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPV 211 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-E-----EESEEEEEECSSE-----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCT
T ss_pred ECCCCEEEEEccCCcccc-c-----cCCceEEEEcCCc-----eEEEEcCCcEEEEcCCCccccccceecCCcccccccC
Confidence 479999999999887632 1 2357789999988 25688899999998877664 44452 1
Q ss_pred ccccCCCCeEEEEEcCCCCEEEE
Q psy17135 73 HRKKFDESILDVAFHPSKPFIAS 95 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s 95 (106)
|. ..|.++.|.+++.++++
T Consensus 212 ~~----~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 212 EE----YSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TT----SEEEEEEESSSSEEEEE
T ss_pred CC----eeEEEEEEecCCeEEEE
Confidence 33 67999999998887765
No 188
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.02 E-value=7.5e-05 Score=44.15 Aligned_cols=95 Identities=11% Similarity=0.125 Sum_probs=58.1
Q ss_pred CCceEEEEeCc-cCceee--e-cccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135 5 PSSVIYIWTLL-ELQTYA--R-NDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE 79 (106)
Q Consensus 5 ~d~~i~iwd~~-~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 79 (106)
.++.|.+||.. +++... . .....+. .....+.+.+.+.. .++...++.|..||.++++.+..+..+. .
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l---~v~~~~~~~i~~~d~~~g~~~~~~~~~~----~ 268 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL---LVANWGSSHIEVFGPDGGQPKMRIRCPF----E 268 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE---EEEEETTTEEEEECTTCBSCSEEEECSS----S
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE---EEEEcCCCEEEEEcCCCCcEeEEEeCCC----C
Confidence 35677888875 333110 1 1111111 22334556665543 5665567789999998777766666555 6
Q ss_pred CeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKP-FIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~-~~~s~~~d~~i~iwd 106 (106)
.+.+++++|++. ++++...++.+..|+
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 789999999998 556666667776653
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.00 E-value=0.00021 Score=41.38 Aligned_cols=92 Identities=5% Similarity=-0.086 Sum_probs=57.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
++.|.+|+..+.... ............+.+.+.+.. +++...++.|.+|+.............. ..+..++
T Consensus 128 ~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~ 198 (270)
T 1rwi_B 128 NNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNV---YVTDTDNNRVVKLEAESNNQVVLPFTDI----TAPWGIA 198 (270)
T ss_dssp GTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCE---EEEEGGGTEEEEECTTTCCEEECCCSSC----CSEEEEE
T ss_pred CCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCE---EEEECCCCEEEEEecCCCceEeecccCC----CCceEEE
Confidence 456777765544331 111111223455667776643 5666667889999987655332222232 5678999
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+++..+++...++.|..|+
T Consensus 199 ~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 199 VDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp ECTTCCEEEEETTTSCEEEEC
T ss_pred ECCCCCEEEEECCCCcEEEEc
Confidence 999998888888888888875
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.00 E-value=3.8e-05 Score=51.05 Aligned_cols=93 Identities=5% Similarity=-0.020 Sum_probs=55.1
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--------------cEEEeeCCCccchheecc
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--------------SIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--------------~v~iwd~~~~~~~~~~~~ 72 (106)
.+|++||+.+++.+..... ......+.|+|+ .. |+.++.+. .|.+|++.+++....+..
T Consensus 189 ~~i~v~dl~tg~~~~~~~~---~~~~~~~~wspD-~~---l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~ 261 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELK---WVKFSGLAWLGN-DA---LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF 261 (741)
T ss_dssp EEEEEEETTTCCEEEEEEE---EEESCCCEESTT-SE---EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEEECCCCCCCCccCC---CceeccEEEECC-CE---EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe
Confidence 5799999999887443111 112346789998 55 34443333 388899877653222111
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEecCCC-----eEEEcC
Q psy17135 73 HRKKFDESILDVAFHPSKPFIASAGADG-----LAKVFV 106 (106)
Q Consensus 73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~-----~i~iwd 106 (106)
....+...+..+.|+|++++++..+.++ .+++||
T Consensus 262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d 300 (741)
T 1yr2_A 262 ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVAR 300 (741)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEE
T ss_pred ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEE
Confidence 1100003578899999999877666443 676664
No 191
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.00 E-value=2.5e-05 Score=48.57 Aligned_cols=94 Identities=5% Similarity=-0.091 Sum_probs=65.9
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccccc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
++.|.+.|..+++.+...... . .. .+.++|.+.. +..++ .++.|.+||..+.+.+..+.....
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG--~-~P-~va~spDG~~---lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGG--F-LP-NPVVADDGSF---IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEEC--S-SC-EEEECTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCEEEEEECCCCeEEEEEECC--C-CC-cEEECCCCCE---EEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence 679999999999987766652 2 22 4888998887 43433 356799999999988887754320
Q ss_pred c---CCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 76 K---FDESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 76 ~---~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
+ .......+.++|+++++..+.. ++.|.++|
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID 166 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD 166 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEE
Confidence 0 0024567899999998776653 67787765
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=4.2e-05 Score=46.52 Aligned_cols=96 Identities=14% Similarity=0.033 Sum_probs=56.2
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFD 78 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~ 78 (106)
..+..|.+||+.+++...... +........|+| .+....+ ++.... ..+.+|++..++. ..+..+.. .
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~sp~dg~~l~~-~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~--~ 237 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQ---DTAWLGHPIYRPFDDSTVGF-CHEGPHDLVDARMWLVNEDGSNV-RKIKEHAE--G 237 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEE---ESSCEEEEEEETTEEEEEEE-EECSCSSSCSCCCEEEETTSCCC-EESSCCCT--T
T ss_pred CCcceEEEEECCCCcEEeecc---CCcccccceECCCCCCEEEE-EecCCCCCCCceEEEEECCCCce-eEeeccCC--C
Confidence 356789999999887633332 123345578888 5554222 222222 4688888865542 23322210 0
Q ss_pred CCeEEEEEcCCCCEEEEecCC-----CeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGAD-----GLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d-----~~i~iwd 106 (106)
..+..+.|+|+++.|+.++.+ +.+++||
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 357788999999976665433 3488775
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.96 E-value=0.00023 Score=42.58 Aligned_cols=87 Identities=11% Similarity=-0.062 Sum_probs=54.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.++.|.+||..+++....... +...+..+.+.+.+.. +++...+ +.|.+||..++.....+.... ....
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~~--~~~~~~~i~~~~dg~l---~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~ 136 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFVS--HKANPAAIKIHKDGRL---FVCYLGDFKSTGGIFAATENGDNLQDIIEDLS--TAYC 136 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEEC--SSSSEEEEEECTTSCE---EEEECTTSSSCCEEEEECTTSCSCEEEECSSS--SCCC
T ss_pred CCCEEEEEeCCCCcEEEEeeC--CCCCcceEEECCCCcE---EEEeCCCCCCCceEEEEeCCCCEEEEEEccCc--cCCc
Confidence 467888999887765332211 1233555777776654 5565555 689999988766432232111 0157
Q ss_pred eEEEEEcCCCCEEEEecC
Q psy17135 81 ILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~ 98 (106)
+..+.++|++..+++...
T Consensus 137 ~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEEEEECTTSCEEEEECC
T ss_pred ccceEECCCCCEEEEecc
Confidence 889999999988877654
No 194
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.94 E-value=4.6e-05 Score=46.33 Aligned_cols=93 Identities=8% Similarity=-0.083 Sum_probs=57.0
Q ss_pred eEEEEeCccCceeeecccCCC---CCCCCeeEeeeCCCCceEEEeeCC--CCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135 8 VIYIWTLLELQTYARNDCPEL---NSEPPACQTIPSSNISLFDSRPGH--DCSIRLWNLDNKTCVQEITAHRKKFDESIL 82 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 82 (106)
.....|..+++.+..+..... ........|+|.+.... ++... +..+.+||+.+++.. .+..... ....
T Consensus 11 ~~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~--~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~---~~~~ 84 (396)
T 3c5m_A 11 FETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLL--FAGDFDGNRNYYLLNLETQQAV-QLTEGKG---DNTF 84 (396)
T ss_dssp EEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEE--EEECTTSSCEEEEEETTTTEEE-ECCCSSC---BCTT
T ss_pred hheeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEE--EEEecCCCceEEEEECCCCcEE-EeecCCC---Cccc
Confidence 345668888877555543211 11245577889888732 23222 346788898877643 3332320 2223
Q ss_pred EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 83 DVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 83 ~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
...|+|+++.|+.++.++.+++||
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEE
T ss_pred cceECCCCCEEEEEEcCCcEEEEE
Confidence 367999999998888888888774
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.93 E-value=0.00027 Score=41.68 Aligned_cols=86 Identities=7% Similarity=-0.019 Sum_probs=56.1
Q ss_pred CCceEEEEeCc-cCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135 5 PSSVIYIWTLL-ELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES 80 (106)
Q Consensus 5 ~d~~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 80 (106)
.++.|.+||+. +++. ...+ .........+.+.+.+.. .++. ++.|.+|+.. ++.+..+..+. .
T Consensus 191 ~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l---~v~~--~~~v~~~~~~-g~~~~~~~~~~----~- 257 (296)
T 3e5z_A 191 GDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLI---WASA--GDGVHVLTPD-GDELGRVLTPQ----T- 257 (296)
T ss_dssp TTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCE---EEEE--TTEEEEECTT-SCEEEEEECSS----C-
T ss_pred CCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCE---EEEc--CCeEEEECCC-CCEEEEEECCC----C-
Confidence 45788999986 4443 1222 112333445667776653 3444 7789999986 77677776665 5
Q ss_pred eEEEEE-cCCCCEEEEecCCCeEE
Q psy17135 81 ILDVAF-HPSKPFIASAGADGLAK 103 (106)
Q Consensus 81 v~~~~~-~~~~~~~~s~~~d~~i~ 103 (106)
+.+++| .|++..|+.++.++..+
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTEEEE
T ss_pred ceeEEEECCCCCEEEEEcCCeEEE
Confidence 888899 58888887777776544
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.89 E-value=9.8e-05 Score=43.58 Aligned_cols=67 Identities=7% Similarity=-0.033 Sum_probs=52.8
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.....|.|.+... ++++..++.|..|+..++ ...+..+. ..+..++++|++.++++...++.|.+||
T Consensus 30 ~eg~~~d~~g~~l--~~~~~~~~~i~~~~~~~~--~~~~~~~~----~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 30 TEGPVYVPARSAV--IFSDVRQNRTWAWSDDGQ--LSPEMHPS----HHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEEEEEGGGTEE--EEEEGGGTEEEEEETTSC--EEEEESSC----SSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred ccCCeEeCCCCEE--EEEeCCCCEEEEEECCCC--eEEEECCC----CCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 4558888888732 678888899999999876 55555555 6789999999999888887778888875
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.89 E-value=4.8e-05 Score=50.17 Aligned_cols=66 Identities=5% Similarity=-0.050 Sum_probs=44.0
Q ss_pred CCeeEeeeCCCCceEEE--eeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 32 PPACQTIPSSNISLFDS--RPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~--s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
.....|+|++....+.. .|+.+..|++||+.+++.+.. .+.. ......++|+||++.|+.++.|..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~--~~~~~~~~wspDg~~l~~~~~d~~ 190 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIE--GGKYATPKWTPDSKGFYYEWLPTD 190 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBS--CCTTCCCEECTTSSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccC--cccccceEEecCCCEEEEEEecCC
Confidence 44578899888732211 456668899999999876411 1110 012267899999999988887665
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.84 E-value=9.5e-05 Score=48.12 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=48.3
Q ss_pred eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 45 LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 45 ~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++++...++.|.++|..+++.+..+... ..+..+.|+|+++++.+++.++.|.+||
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~dg~V~viD 224 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGRDGKVNMID 224 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcCCCeEEEEE
Confidence 34688888999999999999988887644 3667899999999998889999999886
No 199
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.82 E-value=9.4e-05 Score=49.10 Aligned_cols=79 Identities=11% Similarity=0.029 Sum_probs=54.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
+|.|+.||+.+++.+........ .....+...+.. ++.++.|+.++.||.++|+.+..+..... .....+.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~taggl---vf~gt~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~t 524 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNL---VFEGSADGRVIAYAADTGEKLWEQPAASG---VMAAPVT 524 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEE
T ss_pred ceeEEEEECCCCCeEeEccCCCC---ccCccceECCCE---EEEECCCCcEEEEECCCCccceeeeCCCC---cccCceE
Confidence 58999999999998666554221 222234444554 67789999999999999999888765542 2334466
Q ss_pred EcCCCCEE
Q psy17135 86 FHPSKPFI 93 (106)
Q Consensus 86 ~~~~~~~~ 93 (106)
|..+++.+
T Consensus 525 y~~~G~qy 532 (689)
T 1yiq_A 525 YSVDGEQY 532 (689)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 77777754
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.81 E-value=0.0004 Score=41.07 Aligned_cols=91 Identities=8% Similarity=0.012 Sum_probs=59.2
Q ss_pred CceEEEEeCccCceeeecccCC----CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 6 SSVIYIWTLLELQTYARNDCPE----LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
++.|..+|. +++.+..+.... ++.....+...+.+.. +++...++.|..||.+ |+.+..+.... ..
T Consensus 98 ~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~---lv~~~~~~~v~~~d~~-G~~~w~~~~~~-----~~ 167 (276)
T 3no2_A 98 PSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY---LVPLFATSEVREIAPN-GQLLNSVKLSG-----TP 167 (276)
T ss_dssp TEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE---EEEETTTTEEEEECTT-SCEEEEEECSS-----CC
T ss_pred CCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE---EEEecCCCEEEEECCC-CCEEEEEECCC-----Cc
Confidence 345555554 455544443321 1112223444555555 7888899999999998 88887776542 44
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 82 LDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 82 ~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
..+...+++..+++++.++++..+|
T Consensus 168 ~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 168 FSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp CEEEECTTSCEEEECBTTSEEEEEC
T ss_pred cceeEcCCCCEEEEeCCCCeEEEEe
Confidence 5677788999999888888887664
No 201
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.80 E-value=2.8e-06 Score=52.19 Aligned_cols=60 Identities=7% Similarity=-0.159 Sum_probs=34.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
..|+.|+.||..+|+.+..+.. .......+...+.. +++++.|+.+..||..+|+.+..+
T Consensus 16 s~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~---~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 16 TLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPA---FLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CC---EEECTTTCCEEEC-----CCSEEC
T ss_pred cCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCE---EEEeCCCCEEEEEECCCCceeeee
Confidence 3578999999999998666554 12223323343434 677789999999999888764433
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.74 E-value=7.2e-05 Score=49.45 Aligned_cols=65 Identities=5% Similarity=-0.033 Sum_probs=42.8
Q ss_pred CCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 32 PPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
.....|+|++....+... |+....|++||+.+++.......+. .+..++|+||++.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-----~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-----KFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-----CSCCEEECTTSSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-----ccceEEEEeCCCEEEEEEECCc
Confidence 345788998887422111 1222389999999988655332222 3567899999999888876654
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.72 E-value=9.5e-05 Score=46.59 Aligned_cols=93 Identities=8% Similarity=-0.029 Sum_probs=65.5
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-cc
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RK 75 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~ 75 (106)
+.|.++|+.+++.+..+... . .. .+.++|++.. +..+. .++.|.++|..+.+.+..+... ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG--~-~P-gia~SpDgk~---lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGG--F-LP-HPVAAEDGSF---FAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTTEEEEEEEEC--S-SC-EEEECTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCCCEEEEEEECC--C-CC-ceEECCCCCE---EEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 79999999999997777663 2 23 7888898887 44443 3678999999999888777533 10
Q ss_pred cC--CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135 76 KF--DESILDVAFHPSKPFIASAGA--DGLAKVFV 106 (106)
Q Consensus 76 ~~--~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd 106 (106)
+. ......+.++|+++++..+.. ++.|.+.|
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID 206 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVD 206 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEE
Confidence 00 023456789999998877653 56676654
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.69 E-value=0.002 Score=39.08 Aligned_cols=93 Identities=9% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CceEEEEeCccCceeeecccCC----CCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccc---
Q psy17135 6 SSVIYIWTLLELQTYARNDCPE----LNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRK--- 75 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~--- 75 (106)
++.|.+||+.+++.+..+..+. +......+.+.+.+... +++.. .++.|.+||+.+++..+.+..|..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~--yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFV--YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP 169 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEE--EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEE--EEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc
Confidence 5789999999888655554421 11234556666654432 45555 678899999987765444432110
Q ss_pred --------c--------------CCCCeEEEEEcCCCCEEEEecCCC
Q psy17135 76 --------K--------------FDESILDVAFHPSKPFIASAGADG 100 (106)
Q Consensus 76 --------~--------------~~~~v~~~~~~~~~~~~~s~~~d~ 100 (106)
. ....+..++++|+++.+..+..++
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 0 002467899999998766655444
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.65 E-value=0.0021 Score=37.45 Aligned_cols=90 Identities=8% Similarity=-0.027 Sum_probs=55.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec--cccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT--AHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~~~v~~ 83 (106)
++.|..||.. ++. ..+...........+.+.+.+.. .++...++.|..|+.. ++ ...+. ... ..+..
T Consensus 35 ~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~----~~~~~ 103 (299)
T 2z2n_A 35 ANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEV---WFTENAANKIGRITKK-GI-IKEYTLPNPD----SAPYG 103 (299)
T ss_dssp TTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-SC-EEEEECSSTT----CCEEE
T ss_pred CCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCE---EEeCCCCCeEEEECCC-Cc-EEEEeCCCcC----CCcee
Confidence 5678888887 443 23322212233444555555443 5666667889999876 33 22222 122 57889
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++.+++.++++...++.+..||
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRIT 126 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEEC
T ss_pred eEECCCCCEEEEecCCceEEEEC
Confidence 99999999888887777887764
No 206
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.51 E-value=4.1e-05 Score=47.04 Aligned_cols=88 Identities=13% Similarity=0.049 Sum_probs=44.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD 83 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 83 (106)
..|+.|+.||.++|+.+..+... . .....|.+.. ++.++.++.+..||.++|+.+..+.... ...
T Consensus 99 ~~dg~v~a~D~~tG~~~w~~~~~--~----~~~~~p~~~~---v~~~~~dg~v~a~d~~tG~~~W~~~~~~------~~~ 163 (369)
T 2hz6_A 99 KKQDIWYVIDLLTGEKQQTLSSA--F----ADSLSPSTSL---LYLGRTEYTITMYDTKTRELRWNATYFD------YAA 163 (369)
T ss_dssp EEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE------ECC
T ss_pred eCCCEEEEEECCCCcEEEEecCC--C----cccccccCCE---EEEEecCCEEEEEECCCCCEEEeEeccc------ccC
Confidence 35788999999999985555432 1 1223454444 6788889999999999998766554221 011
Q ss_pred EEEcCCC---CEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSK---PFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~---~~~~s~~~d~~i~iwd 106 (106)
..+.++. ..++.++.++.+..||
T Consensus 164 ~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 164 SLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp BCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred ccccCCccccceEEEECCCCEEEEEE
Confidence 1122221 3455566778777765
No 207
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.40 E-value=0.0051 Score=36.47 Aligned_cols=90 Identities=4% Similarity=-0.072 Sum_probs=58.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc-cccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH-RKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~ 83 (106)
.++.|++.|+.+++.+.......+. ....+.. .+.. . .++.-.++.+.++|..+.+.+.++... . .. .
T Consensus 42 ~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~--~g~~-l-yv~t~~~~~v~viD~~t~~v~~~i~~g~~----~g-~- 110 (266)
T 2iwa_A 42 GRSSVRQVALQTGKVENIHKMDDSY-FGEGLTL--LNEK-L-YQVVWLKNIGFIYDRRTLSNIKNFTHQMK----DG-W- 110 (266)
T ss_dssp TTCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTE-E-EEEETTCSEEEEEETTTTEEEEEEECCSS----SC-C-
T ss_pred CCCEEEEEECCCCCEEEEEecCCCc-ceEEEEE--eCCE-E-EEEEecCCEEEEEECCCCcEEEEEECCCC----Ce-E-
Confidence 3678999999999987776653211 1112332 2333 2 466677889999999999888887643 2 22 2
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+++++..++.+..++.+.++|
T Consensus 111 -glt~Dg~~l~vs~gs~~l~viD 132 (266)
T 2iwa_A 111 -GLATDGKILYGSDGTSILYEID 132 (266)
T ss_dssp -EEEECSSSEEEECSSSEEEEEC
T ss_pred -EEEECCCEEEEECCCCeEEEEE
Confidence 2455666655555677887765
No 208
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.38 E-value=0.0063 Score=35.64 Aligned_cols=89 Identities=9% Similarity=-0.003 Sum_probs=57.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.+.|+.+|+++++.+.....+...- ...+.. .+.. . ....-.++.+.++|..+.+.+.++.... .. ..++
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~--~~~~-l-y~ltw~~~~v~v~D~~tl~~~~ti~~~~----~G-wglt 111 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPYF-GAGIVA--WRDR-L-IQLTWRNHEGFVYDLATLTPRARFRYPG----EG-WALT 111 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTCC-EEEEEE--ETTE-E-EEEESSSSEEEEEETTTTEEEEEEECSS----CC-CEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCcc-eeEEEE--eCCE-E-EEEEeeCCEEEEEECCcCcEEEEEeCCC----Cc-eEEe
Confidence 4689999999999987776642211 111222 2333 2 3556678899999999999888887543 22 3333
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++..++.+..++.+.++|
T Consensus 112 --~dg~~L~vSdgs~~l~~iD 130 (243)
T 3mbr_X 112 --SDDSHLYMSDGTAVIRKLD 130 (243)
T ss_dssp --ECSSCEEEECSSSEEEEEC
T ss_pred --eCCCEEEEECCCCeEEEEe
Confidence 4555555555577888775
No 209
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.38 E-value=0.00099 Score=44.25 Aligned_cols=80 Identities=5% Similarity=-0.047 Sum_probs=54.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.+.|..||+.+++.+....... ..........+.. ++.++.|+.+++||.++++.+..+..... .....+.
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~~~g~~---v~~g~~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~~ 526 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGNV---VFQGTADGRLVAYHAATGEKLWEAPTGTG---VVAAPST 526 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEE
T ss_pred ccEEEEEeCCCCcEEeecCCCC---CCcCcceEeCCCE---EEEECCCCcEEEEECCCCceeeeeeCCCC---cccCCEE
Confidence 4899999999999866655421 1222334455554 56788999999999999999888865442 3334556
Q ss_pred EcCCCCEEE
Q psy17135 86 FHPSKPFIA 94 (106)
Q Consensus 86 ~~~~~~~~~ 94 (106)
|.++++.++
T Consensus 527 y~~~G~~~v 535 (677)
T 1kb0_A 527 YMVDGRQYV 535 (677)
T ss_dssp EEETTEEEE
T ss_pred EEeCCEEEE
Confidence 667776543
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.37 E-value=0.0016 Score=40.59 Aligned_cols=64 Identities=11% Similarity=0.136 Sum_probs=46.1
Q ss_pred CceEEEEeCccCceeeecccCC-----CCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeCCCccchheecc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPE-----LNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~~~~~~~~~~~~ 72 (106)
++.|.+||..+++.+....... .......+.++|++.. +..++ .++.|.++|..+++.+.++..
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~---lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT---LLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSE---EEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCE---EEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 5789999999999877665421 0113455788888877 44443 368899999999998887753
No 211
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.35 E-value=0.00084 Score=40.24 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=49.2
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
...|.+|| +++.. .+ ...+...+.. ..|. .+ ++++++.++.+++| +.+++. ..+..+. ..+..+
T Consensus 243 ~~~l~~~d--~~~~~-~l-~~~~~~~~~~~~~~s-dg----~~~~~~~~~~~~l~-~~~g~~-~~~~~~~----~~v~~~ 307 (347)
T 2gop_A 243 HNKLYIYD--GKEVM-GI-LDEVDRGVGQAKIKD-GK----VYFTLFEEGSVNLY-IWDGEI-KPIAKGR----HWIMGF 307 (347)
T ss_dssp SCEEEEEC--SSCEE-ES-STTCCSEEEEEEEET-TE----EEEEEEETTEEEEE-EESSSE-EEEECSS----SEEEEE
T ss_pred cceEEEEC--CCceE-ec-cccCCcccCCccEEc-Cc----EEEEEecCCcEEEE-EcCCce-EEEecCC----CeEEee
Confidence 45788888 55441 22 2112222332 5565 33 36888889999999 875554 3333344 678899
Q ss_pred EEcCCCCEEEEecCCCeE-EEc
Q psy17135 85 AFHPSKPFIASAGADGLA-KVF 105 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i-~iw 105 (106)
+|+| ..+++++.++.. .+|
T Consensus 308 ~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 308 DVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp EESS--SEEEEEECSSSCCEEE
T ss_pred eeeC--cEEEEEcCCCChHHhe
Confidence 9999 566666655543 444
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.33 E-value=0.0019 Score=42.85 Aligned_cols=88 Identities=9% Similarity=-0.015 Sum_probs=52.6
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-------------CcEEEeeCCCccch----he
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-------------CSIRLWNLDNKTCV----QE 69 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-------------~~v~iwd~~~~~~~----~~ 69 (106)
.+|++||+.+++.+.. ... ........|+ ++.. |+.++.+ ..|++|++.+++.. ..
T Consensus 155 ~~i~v~dl~tg~~~~~-~~~--~~k~~~~~Ws-Dg~~---l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 227 (693)
T 3iuj_A 155 REIHLMDVESKQPLET-PLK--DVKFSGISWL-GNEG---FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG 227 (693)
T ss_dssp EEEEEEETTTCSEEEE-EEE--EEESCCCEEE-TTTE---EEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred EEEEEEECCCCCCCcc-ccC--CceeccEEEe-CCCE---EEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEe
Confidence 6899999999986433 111 1113456788 7766 3444333 34889998876532 22
Q ss_pred ecc-ccccCCCCeEEEEEcCCCCEEE-EecC---CCeEEEc
Q psy17135 70 ITA-HRKKFDESILDVAFHPSKPFIA-SAGA---DGLAKVF 105 (106)
Q Consensus 70 ~~~-~~~~~~~~v~~~~~~~~~~~~~-s~~~---d~~i~iw 105 (106)
... +. .....+.++|++++++ +.+. ...++++
T Consensus 228 ~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 264 (693)
T 3iuj_A 228 AIPAQH----HRYVGATVTEDDRFLLISAANSTSGNRLYVK 264 (693)
T ss_dssp CSGGGC----CSEEEEEECTTSCEEEEEEESSSSCCEEEEE
T ss_pred cCCCCC----eEEEEEEEcCCCCEEEEEEccCCCCcEEEEE
Confidence 222 23 4577889999999864 3332 2356655
No 213
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.32 E-value=0.0039 Score=37.02 Aligned_cols=89 Identities=7% Similarity=-0.098 Sum_probs=57.1
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.+|.|+.+|+++++.+... .. . .....-..+.+.. . ....-.++.+.++|..+.+.+.++.... .. ..+
T Consensus 73 ~~g~v~~iD~~Tgkv~~~~-l~--~-~~FgeGit~~g~~-L-y~ltw~~~~v~V~D~~Tl~~~~ti~~~~----eG-wGL 141 (268)
T 3nok_A 73 HQGTLRQLSLESAQPVWME-RL--G-NIFAEGLASDGER-L-YQLTWTEGLLFTWSGMPPQRERTTRYSG----EG-WGL 141 (268)
T ss_dssp TTTEEEECCSSCSSCSEEE-EC--T-TCCEEEEEECSSC-E-EEEESSSCEEEEEETTTTEEEEEEECSS----CC-CCE
T ss_pred CCCEEEEEECCCCcEEeEE-CC--C-CcceeEEEEeCCE-E-EEEEccCCEEEEEECCcCcEEEEEeCCC----ce-eEE
Confidence 4567999999999987776 43 1 1212111233333 2 3456678899999999999988887543 22 333
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+ +++..|+.+..++.+.++|
T Consensus 142 t--~Dg~~L~vSdGs~~l~~iD 161 (268)
T 3nok_A 142 C--YWNGKLVRSDGGTMLTFHE 161 (268)
T ss_dssp E--EETTEEEEECSSSEEEEEC
T ss_pred e--cCCCEEEEECCCCEEEEEc
Confidence 3 4567666666677887765
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.31 E-value=0.0076 Score=35.10 Aligned_cols=91 Identities=9% Similarity=-0.052 Sum_probs=54.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~ 84 (106)
++.|..||.. ++. ..+..+........+.+.+.+.. .++...++.+..||. +++.... ..... ..+..+
T Consensus 77 ~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~d~-~g~~~~~~~~~~~----~~~~~i 146 (299)
T 2z2n_A 77 ANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDI---WFTEMNGNRIGRITD-DGKIREYELPNKG----SYPSFI 146 (299)
T ss_dssp TTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECT-TCCEEEEECSSTT----CCEEEE
T ss_pred CCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCE---EEEecCCceEEEECC-CCCEEEecCCCCC----CCCceE
Confidence 5667778775 322 22322212223444555555433 566666788999998 5543221 12222 578899
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+++..+++...++.+..+|
T Consensus 147 ~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 147 TLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEEC
T ss_pred EEcCCCCEEEEeCCCCEEEEEc
Confidence 9999998888877777777764
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.26 E-value=0.0088 Score=34.83 Aligned_cols=93 Identities=6% Similarity=-0.105 Sum_probs=55.4
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|..||.. ++.. .+...........+.+.+.+.. .++...++.|..+|.. ++. ..+..... ...+..+
T Consensus 39 ~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~v~~~d~~-g~~-~~~~~~~~--~~~~~~i 109 (300)
T 2qc5_A 39 KANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDI---WFTENGANKIGKLSKK-GGF-TEYPLPQP--DSGPYGI 109 (300)
T ss_dssp TTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-SCE-EEEECSST--TCCEEEE
T ss_pred CCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCE---EEEecCCCeEEEECCC-CCe-EEecCCCC--CCCCccc
Confidence 35678888877 4432 2222212223344555554443 5666667889999987 543 22221110 1578899
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+++.++++...++.+..+|
T Consensus 110 ~~~~~g~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 110 TEGLNGDIWFTQLNGDRIGKLT 131 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEEC
T ss_pred eECCCCCEEEEccCCCeEEEEC
Confidence 9999999888877777777654
No 216
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.24 E-value=0.0053 Score=36.36 Aligned_cols=89 Identities=9% Similarity=0.022 Sum_probs=55.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.+.|+.+|+++++.+....... .....-..+.+.. . .+..-.++.+.++|..+.+.+.++.... .. ..
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGit~~g~~-l-y~ltw~~~~v~v~D~~t~~~~~ti~~~~----eG-~g-- 131 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGK---RYFGEGISDWKDK-I-VGLTWKNGLGFVWNIRNLRQVRSFNYDG----EG-WG-- 131 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCT---TCCEEEEEEETTE-E-EEEESSSSEEEEEETTTCCEEEEEECSS----CC-CC--
T ss_pred CceEEEEECCCCcEEEEEecCC---ccceeEEEEeCCE-E-EEEEeeCCEEEEEECccCcEEEEEECCC----Cc-eE--
Confidence 3589999999999977776632 1212111222333 2 3445567899999999999888887543 11 22
Q ss_pred EcCCCCEEEEecCCCeEEEcC
Q psy17135 86 FHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 86 ~~~~~~~~~s~~~d~~i~iwd 106 (106)
+++++..++.+..++.+.++|
T Consensus 132 lt~dg~~L~~SdGs~~i~~iD 152 (262)
T 3nol_A 132 LTHNDQYLIMSDGTPVLRFLD 152 (262)
T ss_dssp EEECSSCEEECCSSSEEEEEC
T ss_pred EecCCCEEEEECCCCeEEEEc
Confidence 234566655555567777765
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.23 E-value=0.0028 Score=39.56 Aligned_cols=90 Identities=7% Similarity=-0.045 Sum_probs=54.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchhee---cc-ccccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEI---TA-HRKKFD 78 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~---~~-~~~~~~ 78 (106)
.++.|+.||..++........ ..... +.+.+.+.. ++.+..++ .|..++...+.....+ .. ..
T Consensus 150 ~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~---l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~---- 218 (409)
T 3hrp_A 150 DDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQR---VYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS---- 218 (409)
T ss_dssp TTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSE---EEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC----
T ss_pred CCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCc---EEEEecCCCceEEEEEcCCCceeEEeeeccchhc----
Confidence 457888899887665333222 11223 777777765 55555544 7888887655433333 12 22
Q ss_pred CCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
.....++++| ++.+++ +..++.|+.||
T Consensus 219 ~~p~~iav~p~~g~lyv-~d~~~~I~~~d 246 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYF-VDSNKNFGRFN 246 (409)
T ss_dssp SCCCBCEECTTSSEEEE-ECTTCEEEEEE
T ss_pred CCcEEEEEeCCCCeEEE-EECCCcEEEEE
Confidence 5677889999 555555 66677777664
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.18 E-value=0.007 Score=37.38 Aligned_cols=49 Identities=2% Similarity=-0.060 Sum_probs=39.2
Q ss_pred CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEEcC
Q psy17135 53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKVFV 106 (106)
Q Consensus 53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~iwd 106 (106)
.+.|.++|..+++.++.+... .....+.|+|+++ .++++. .++.+.++|
T Consensus 297 ~~~V~VID~~t~~vv~~i~~g-----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 297 AKEVTSVTGLVGQTSSQISLG-----HDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred CCeEEEEECCCCEEEEEEECC-----CCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 357999999999988888533 4678999999999 677776 588998876
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.17 E-value=0.015 Score=37.18 Aligned_cols=95 Identities=8% Similarity=0.071 Sum_probs=61.8
Q ss_pred CceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeC-------------------CCCcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPG-------------------HDCSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~-------------------~d~~v~iwd~~~~~ 65 (106)
.+.|.+.|.++++.+.+....... .....+-|+|.... +++.. ...+|.+||+.+++
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~---mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV---LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE---EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE---EEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 378999999999987777643222 22333666787775 55553 36889999999887
Q ss_pred chheeccccccCCCCeEEEEE--cCCCCEEEEec------CCCeEEEc
Q psy17135 66 CVQEITAHRKKFDESILDVAF--HPSKPFIASAG------ADGLAKVF 105 (106)
Q Consensus 66 ~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~~------~d~~i~iw 105 (106)
.+.++..... ......+.| +|+++++..++ .+++|.+|
T Consensus 240 ~~~tI~vg~~--g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~ 285 (462)
T 2ece_A 240 RIHSLTLGEE--NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW 285 (462)
T ss_dssp EEEEEESCTT--EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred EeeEEecCCC--CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence 7777654310 023445555 99999865555 44566543
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.07 E-value=0.0032 Score=41.95 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=36.4
Q ss_pred CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+..||+.+++.+.++..+. ......+...+..++.++.|+.++.||
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-----~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-----IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-----SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCC-----CccCccceECCCEEEEECCCCcEEEEE
Confidence 4779999999999877766543 222234555677888899999999886
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.07 E-value=0.0094 Score=35.09 Aligned_cols=91 Identities=14% Similarity=0.037 Sum_probs=50.3
Q ss_pred CCCceEEEEeCccCceeeeccc--CCCCCCCCeeEeeeC-CCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCC
Q psy17135 4 VPSSVIYIWTLLELQTYARNDC--PELNSEPPACQTIPS-SNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDE 79 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~ 79 (106)
..++.|..||..+++....... ..+...+..+.+.+. +.. +++.. ...+..||.. ++.... ..........
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l---~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQL---FVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEE---EEEET-TTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcE---EEEEC-CCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 3467899999887775321110 001123445666665 332 34444 3468889987 654322 1111100013
Q ss_pred CeEEEEEcCCCCEEEEecCC
Q psy17135 80 SILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d 99 (106)
.+..+++.+++.++++...+
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp CCCEEEECTTSCEEEEECBC
T ss_pred CCcCEEECCCCCEEEEecCc
Confidence 57889999999988777654
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.05 E-value=0.0035 Score=41.68 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=35.2
Q ss_pred CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.+..||+.+++.+..+... .......+...+..++.++.|+.++.||
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-----~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-----SPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCC-----CCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 67999999999877666533 2334444566677888889999998875
No 223
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.03 E-value=0.0047 Score=36.56 Aligned_cols=56 Identities=4% Similarity=-0.088 Sum_probs=40.0
Q ss_pred eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc-CCCCEE-EEec
Q psy17135 35 CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH-PSKPFI-ASAG 97 (106)
Q Consensus 35 ~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~-~s~~ 97 (106)
+.+.+.+.. .++....+.|..||..+++.+..+..+. ..+.+++|. |++..| ++..
T Consensus 204 ~~~d~~G~l---wva~~~~~~v~~~d~~tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 204 MCIDAEGKL---WVACYNGGRVIRLDPVTGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEBTTSCE---EEEEETTTEEEEECTTTCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEB
T ss_pred eEECCCCCE---EEEEcCCCEEEEEcCCCceEEEEEECCC----CCceEEEEeCCCCCEEEEEcC
Confidence 445555533 4565566789999999898888887776 689999998 777654 4443
No 224
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.97 E-value=0.0056 Score=40.08 Aligned_cols=80 Identities=4% Similarity=-0.132 Sum_probs=51.5
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.+|.|..||+.+++.+-+....... ........+.. ++.++.|+.++.||.++|+.+..+..... ....-+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~---~~g~~~taggl---vf~g~~dg~l~A~D~~tG~~lW~~~~~~g---~~a~P~ 534 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNL---VFTGTGDGYFKAFDAKSGKELWKFQTGSG---IVSPPI 534 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred CcceEEEEECCCCCEEEEecCCCCC---cccceEeCCCE---EEEECCCCcEEEEECCCCCEEEEecCCCC---cccCce
Confidence 4799999999999986555442111 11111122333 56688999999999999999887765441 122235
Q ss_pred EEcCCCCEE
Q psy17135 85 AFHPSKPFI 93 (106)
Q Consensus 85 ~~~~~~~~~ 93 (106)
.|..+++.+
T Consensus 535 ~y~~~G~qY 543 (582)
T 1flg_A 535 TWEQDGEQY 543 (582)
T ss_dssp EEEETTEEE
T ss_pred EEEECCEEE
Confidence 566677654
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.93 E-value=0.023 Score=33.72 Aligned_cols=93 Identities=4% Similarity=-0.055 Sum_probs=59.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc-cCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK-KFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~ 83 (106)
.++.+.++|..+++.+..+... .... ....+.+.. +..+..++.+.++|..+.+.++.+..... +.-...+.
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g--~~~g--~glt~Dg~~---l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ--MKDG--WGLATDGKI---LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC--SSSC--CEEEECSSS---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred cCCEEEEEECCCCcEEEEEECC--CCCe--EEEEECCCE---EEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 5788999999999887776543 1112 223455555 33444578999999998887777653320 00124667
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.|. ++..++....++.|.+.
T Consensus 157 le~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEE-CCEEEEecCCCCeEEEE
Confidence 7777 67666666666676654
No 226
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.92 E-value=0.021 Score=33.20 Aligned_cols=91 Identities=7% Similarity=-0.137 Sum_probs=52.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~ 84 (106)
++.|..+|. +++.. .+...........+.+.+.+.. .++....+.|..++. +++.... +.... ..+..+
T Consensus 166 ~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l---~v~~~~~~~i~~~~~-~g~~~~~~~~~~~----~~~~~i 235 (300)
T 2qc5_A 166 NNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGAL---WFVEIMGNKIGRITT-TGEISEYDIPTPN----ARPHAI 235 (300)
T ss_dssp TTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSE---EEEETTTTEEEEECT-TCCEEEEECSSTT----CCEEEE
T ss_pred CCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCCE---EEEccCCCEEEEEcC-CCcEEEEECCCCC----CCceEE
Confidence 456777776 44432 2222212222334555554432 455556677999988 4443222 22223 578899
Q ss_pred EEcCCCCEEEEecCCCeEEEcC
Q psy17135 85 AFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+++.++++...++.|..+|
T Consensus 236 ~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 236 TAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEEC
T ss_pred EECCCCCEEEeccCCCeEEEEC
Confidence 9999998888777777777664
No 227
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.79 E-value=0.03 Score=33.09 Aligned_cols=83 Identities=14% Similarity=0.181 Sum_probs=48.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|..||..+++. ..+.. ...+..+.+.+.+.. +++. +..|.+||..+++...............+..+
T Consensus 33 ~~~~i~~~d~~~~~~-~~~~~---~~~~~~i~~~~dG~l---~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQV-QRVTM---DAPVSSVALRQSGGY---VATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TTTEEEEEETTTCCE-EEEEC---SSCEEEEEEBTTSSE---EEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CCCEEEEEECCCCcE-EEEeC---CCceEEEEECCCCCE---EEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 456788888876654 22222 223445667776653 3443 45788999987764322211110011457889
Q ss_pred EEcCCCCEEEEe
Q psy17135 85 AFHPSKPFIASA 96 (106)
Q Consensus 85 ~~~~~~~~~~s~ 96 (106)
++.|+++++++.
T Consensus 104 ~~d~dG~l~~~~ 115 (297)
T 3g4e_A 104 KVDPAGRYFAGT 115 (297)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCCEEEec
Confidence 999999977764
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.77 E-value=0.018 Score=34.15 Aligned_cols=66 Identities=6% Similarity=-0.116 Sum_probs=47.5
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
....|.|.+... +++...++.+..|+. ++. ...+..+. ..+..+++.++++++++...++.|..|+
T Consensus 48 egp~~~~~g~~l--~~~d~~~~~i~~~~~-~g~-~~~~~~~~----~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 48 EGPAWWEAQRTL--VWSDLVGRRVLGWRE-DGT-VDVLLDAT----AFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEEEEGGGTEE--EEEETTTTEEEEEET-TSC-EEEEEESC----SCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred cCCeEeCCCCEE--EEEECCCCEEEEEeC-CCC-EEEEeCCC----CccceeeECCCCCEEEEECCCCEEEEEC
Confidence 446788877743 577888899999988 444 34444444 6788999999999877766667776664
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.76 E-value=0.009 Score=38.99 Aligned_cols=82 Identities=4% Similarity=-0.168 Sum_probs=51.2
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|..||+.+++.+.+..... ..........+.. ++.++.|+.+..+|.++++.+..+..... .....+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~---~~~~~~~~t~gg~---v~~g~~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~ 512 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF---AAWGGTLYTKGGL---VWYATLDGYLKALDNKDGKELWNFKMPSG---GIGSPM 512 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS---CCCSBCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred CCCeEEEEECCCCCEEEEecCCC---CccceeEEECCCE---EEEEcCCCeEEEEECCCCCEEEEEeCCCC---cEeeeE
Confidence 46899999999999866654421 1112222233433 45688999999999999998877764431 111223
Q ss_pred EEcCCCCEEEE
Q psy17135 85 AFHPSKPFIAS 95 (106)
Q Consensus 85 ~~~~~~~~~~s 95 (106)
.+..++..++.
T Consensus 513 ~~~~~G~~yv~ 523 (571)
T 2ad6_A 513 TYSFKGKQYIG 523 (571)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCEEEEE
Confidence 45566765443
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.74 E-value=0.044 Score=34.21 Aligned_cols=97 Identities=5% Similarity=-0.136 Sum_probs=58.2
Q ss_pred CceEEEEeCccCceeeecc--cCCCCCCC-C-eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc--c----
Q psy17135 6 SSVIYIWTLLELQTYARND--CPELNSEP-P-ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR--K---- 75 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~--~~~~~~~~-~-~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~--~---- 75 (106)
++.|+.||..++....... ........ . .+.+.|.+... +++-..++.|+.|+.... +..+.++. .
T Consensus 239 ~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l--yv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~d 314 (409)
T 3hrp_A 239 NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF--YMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQD 314 (409)
T ss_dssp TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE--EEEETTTTEEEEECTTCC--EEEEEECTTCCSCBC
T ss_pred CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE--EEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCC
Confidence 5678888887765422100 11111111 2 67888855442 567777889999987643 22222211 0
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135 76 -----KFDESILDVAFHPSKPFIASAG-ADGLAKVFV 106 (106)
Q Consensus 76 -----~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd 106 (106)
..-.....++++|++.++++-. .+++|+.|+
T Consensus 315 g~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 315 GLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred CcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 0013477899999999888888 888888774
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.71 E-value=0.011 Score=39.01 Aligned_cols=90 Identities=11% Similarity=0.013 Sum_probs=62.6
Q ss_pred ceEEEEeCcc--Cce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------hheec
Q psy17135 7 SVIYIWTLLE--LQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------VQEIT 71 (106)
Q Consensus 7 ~~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~~~~~ 71 (106)
+.|.+.|.++ ++. +...... .....+.+.|++... ++++..+.+|.++|..+.+. ..++
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v--~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v- 327 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHL--CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP- 327 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEE--EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-
T ss_pred CcEEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEE--EEeCCCCCeEEEEECcccccccccccCcccceEEEc-
Confidence 3488999987 433 2233321 246778899998885 67788889999999986531 1122
Q ss_pred cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.. ..+...++|+|+|..+.+..-|+.|..|+
T Consensus 328 -~v---G~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 328 -EL---GLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp -BC---CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred -CC---CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 11 15778899999996577888999998885
No 232
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.70 E-value=0.0099 Score=39.49 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=44.3
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
+|.|..||+.+++.+-+...... .........+.. ++.++.|+.++.||.++++.+..+....
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~---vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNL---VFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEeCCCCcEEEEccCCCC---CcCceeEeCCCE---EEEECCcccchhhhhhcChhheEecCCC
Confidence 48999999999998665544211 122223344444 5778999999999999999887776543
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.61 E-value=0.012 Score=37.26 Aligned_cols=48 Identities=6% Similarity=0.107 Sum_probs=39.1
Q ss_pred CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEEcC
Q psy17135 54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKVFV 106 (106)
Q Consensus 54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~iwd 106 (106)
+.|.++|..+.+.++.+.... ....+.|+|+++ .+++.. .++.|.++|
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 579999999999888886443 578899999998 777766 589998876
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.61 E-value=0.014 Score=35.53 Aligned_cols=90 Identities=7% Similarity=-0.083 Sum_probs=53.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE-
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD- 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~- 83 (106)
.++.|..+|..+++.+....... ........ ..+.. +..++.++.+.++|..+++.+....... ..+..
T Consensus 285 ~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~--~~~~~---l~v~~~~g~l~~~d~~tG~~~~~~~~~~----~~~~~~ 354 (376)
T 3q7m_A 285 QNDRVMALTIDGGVTLWTQSDLL-HRLLTSPV--LYNGN---LVVGDSEGYLHWINVEDGRFVAQQKVDS----SGFQTE 354 (376)
T ss_dssp TTCCEEEEETTTCCEEEEECTTT-TSCCCCCE--EETTE---EEEECTTSEEEEEETTTCCEEEEEECCT----TCBCSC
T ss_pred CCCeEEEEECCCCcEEEeecccC-CCcccCCE--EECCE---EEEEeCCCeEEEEECCCCcEEEEEecCC----CcceeC
Confidence 46778889988888755443111 11111111 12333 5778889999999999998776665422 22221
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
... .+..+..++.+|.+..|+
T Consensus 355 ~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 355 PVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEE--ETTEEEEEBTTSCEEEEE
T ss_pred CEE--ECCEEEEEeCCCEEEEEe
Confidence 112 245677778889888764
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.59 E-value=0.045 Score=32.54 Aligned_cols=93 Identities=10% Similarity=-0.002 Sum_probs=59.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~ 83 (106)
.++.+.+||.++++.+..+... .....+. +.+.. |.....+..+.++|..+.+.++.+...... .-..++.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~---~eGwGLt--~Dg~~---L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYS---GEGWGLC--YWNGK---LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECS---SCCCCEE--EETTE---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCC---CceeEEe--cCCCE---EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 4789999999999998877763 1222333 33444 344445788999999998887776543210 0024556
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|. ++..++....+..|.+.|
T Consensus 186 Le~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 186 LECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EEEE-TTEEEEEETTCSEEEEEC
T ss_pred cEEe-CCEEEEEECCCCeEEEEe
Confidence 6666 666666666666766544
No 236
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.57 E-value=0.035 Score=34.28 Aligned_cols=84 Identities=8% Similarity=0.166 Sum_probs=59.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+++++|+.+.+.+..+... ..+.-..|......+ ++|.. .|..|++.. ..+.+.+.-|.......|...
T Consensus 86 g~~LQiFnletK~klks~~~~---e~VvfWkWis~~~L~--lVT~t---aVyHWs~~~~s~P~kvFdR~~~L~~~QIInY 157 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINY 157 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECS---SCEEEEEECSSSEEE--EEESS---EEEEEESSTTCCCEEEEECCGGGTTCEEEEE
T ss_pred CCeEEEechHHhhhhcceecC---CccEEEEecCCCeEE--EEcCC---cEEEEcccCCCCCceeeecchhcccceEEEE
Confidence 467999999999887777773 356667888777765 55654 699999975 345666665554333567777
Q ss_pred EEcCCCCEEEEec
Q psy17135 85 AFHPSKPFIASAG 97 (106)
Q Consensus 85 ~~~~~~~~~~s~~ 97 (106)
..+++.+|++-.+
T Consensus 158 ~~d~~~kW~~l~G 170 (365)
T 2xzh_A 158 RTDAKQKWLLLTG 170 (365)
T ss_dssp EECTTSCEEEEEE
T ss_pred EECCCCCEEEEEe
Confidence 7788888865544
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.52 E-value=0.04 Score=33.52 Aligned_cols=65 Identities=6% Similarity=-0.082 Sum_probs=39.9
Q ss_pred CCceEEEEeCccCceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
.++.|..+|.++++.+......... ...........+.. +..++.++.+..+|..+|+.+.....
T Consensus 61 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 61 RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGH---VYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTE---EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCE---EEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 4678999999999886555542210 11111111222333 46677789999999999987655543
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.47 E-value=0.055 Score=32.07 Aligned_cols=93 Identities=10% Similarity=0.060 Sum_probs=58.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~ 83 (106)
.++.+.++|.++++.+..+.... ....+. +.+.. ++....+..+.++|..+.+.++.+...... .-..++.
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~---eG~glt--~dg~~---L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDG---EGWGLT--HNDQY---LIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNE 176 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS---CCCCEE--ECSSC---EEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEE
T ss_pred eCCEEEEEECccCcEEEEEECCC---CceEEe--cCCCE---EEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccce
Confidence 47889999999999988777632 222232 44444 344444678999999998877776543210 0034455
Q ss_pred EEEcCCCCEEEEecCCCeEEEcC
Q psy17135 84 VAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.|. ++..++....+..|.+.|
T Consensus 177 Le~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 177 LEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEEE-TTEEEEEETTSSEEEEEC
T ss_pred eEEE-CCEEEEEEccCCeEEEEE
Confidence 6665 666666666666766544
No 239
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.46 E-value=0.063 Score=34.49 Aligned_cols=84 Identities=8% Similarity=0.166 Sum_probs=60.0
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+++|+|+.+.+.+..+... ..+.-..|......+ ++|.. .|..|++.. ..+.+.+.-|.......|...
T Consensus 85 g~~lQiFnle~K~klks~~~~---e~VvfWkWis~~~l~--lVT~t---aVyHWsi~~~s~P~kvFdR~~~L~~~QIInY 156 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINY 156 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECS---SCCCEEEEEETTEEE--EECSS---EEEEEESSSSCCCEEEEECCGGGTTCEEEEE
T ss_pred CCeEEEEchHHhhhhcceecC---CCceEEEecCCCeEE--EEcCC---eeEEecccCCCCchhheecchhcccceEEEE
Confidence 467999999998887777773 357788898887775 55544 699999975 345666665554333567777
Q ss_pred EEcCCCCEEEEec
Q psy17135 85 AFHPSKPFIASAG 97 (106)
Q Consensus 85 ~~~~~~~~~~s~~ 97 (106)
..+++.+|++-.+
T Consensus 157 ~~d~~~kW~~l~G 169 (494)
T 1bpo_A 157 RTDAKQKWLLLTG 169 (494)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCeEEEEe
Confidence 7788999875443
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.41 E-value=0.065 Score=32.20 Aligned_cols=69 Identities=9% Similarity=0.000 Sum_probs=43.9
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cc-cch--hee---ccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NK-TCV--QEI---TAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~-~~~--~~~---~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~ 103 (106)
...+.|.|.+... +++...++.|.+|++. ++ ... ..+ .... .....+.+.+++.++++...++.|.
T Consensus 181 ~~~i~~s~dg~~l--yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~----~~p~gi~~d~~G~lwva~~~~~~v~ 254 (326)
T 2ghs_A 181 PNSICFSPDGTTG--YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIK----GGMDGSVCDAEGHIWNARWGEGAVD 254 (326)
T ss_dssp EEEEEECTTSCEE--EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSS----SEEEEEEECTTSCEEEEEETTTEEE
T ss_pred cCCeEEcCCCCEE--EEEECCCCEEEEEEcccccCCcccCceEEEECCCCC----CCCCeeEECCCCCEEEEEeCCCEEE
Confidence 3456778777652 3556667889999986 55 321 112 1122 3566788888888877776667777
Q ss_pred EcC
Q psy17135 104 VFV 106 (106)
Q Consensus 104 iwd 106 (106)
.|+
T Consensus 255 ~~d 257 (326)
T 2ghs_A 255 RYD 257 (326)
T ss_dssp EEC
T ss_pred EEC
Confidence 764
No 241
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.30 E-value=0.037 Score=37.00 Aligned_cols=92 Identities=9% Similarity=-0.010 Sum_probs=50.8
Q ss_pred CceEEEEeCccCceee--ecccCCCCCCCCeeEeeeCCCCceEEEeeC-----CCCcEEEeeCCCc--cchheecccccc
Q psy17135 6 SSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPSSNISLFDSRPG-----HDCSIRLWNLDNK--TCVQEITAHRKK 76 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-----~d~~v~iwd~~~~--~~~~~~~~~~~~ 76 (106)
...|.+|++.+++... .+....+........|+|++... +..+ ....+.+||+.++ ++...+..+.
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l---~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-- 316 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWV---VITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-- 316 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE---EEEEECTTCSCCEEEEEEEETTEECCCEEEECSS--
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEE---EEEEEccCCCcceEEEEECCCCCCcccEEecCCC--
Confidence 3468899997765311 22221111224567888888773 3332 2347999999876 3245555554
Q ss_pred CCCCeEEEEEcCCCCEEEEecC----CCeEEEc
Q psy17135 77 FDESILDVAFHPSKPFIASAGA----DGLAKVF 105 (106)
Q Consensus 77 ~~~~v~~~~~~~~~~~~~s~~~----d~~i~iw 105 (106)
...... ++|++..++..+. ++.+.+|
T Consensus 317 --~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 317 --KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp --SSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred --CceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 333433 3477777655543 2346555
No 242
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.28 E-value=0.03 Score=36.93 Aligned_cols=79 Identities=4% Similarity=-0.144 Sum_probs=49.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.+|.|..||+.+++.+-....... .........+.. ++.++.|+.++.+|.++|+.+..+..... ....-+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~---vf~gt~dg~l~A~D~~tG~~lW~~~l~~g---~~~~P~ 521 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDL---VFYGTLDGYLKARDSDTGDLLWKFKIPSG---AIGYPM 521 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred CcCeEEEEECCCCCEEeEecCCCC---ccCcceEecCCE---EEEECCCCeEEEEECCCCCEEEEeeCCCC---cEeccE
Confidence 468999999999998655543211 111111122333 45688999999999999998877764431 222334
Q ss_pred EEcCCCCE
Q psy17135 85 AFHPSKPF 92 (106)
Q Consensus 85 ~~~~~~~~ 92 (106)
.|..+++.
T Consensus 522 ~y~~~G~q 529 (599)
T 1w6s_A 522 TYTHKGTQ 529 (599)
T ss_dssp EEEETTEE
T ss_pred EEEeCCEE
Confidence 55566764
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.22 E-value=0.046 Score=36.13 Aligned_cols=92 Identities=7% Similarity=-0.017 Sum_probs=56.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC------------------------------
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD------------------------------ 53 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d------------------------------ 53 (106)
..++.+.+.|..+.+......... ..-.+...|.+.. +++.+.+
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~---~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v 245 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKW---AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 245 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSE---EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred ccCceEEEEECCCCeEEEEEEeCC---CccceEECCCCCE---EEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence 346789999999988766555421 2334555666555 3333322
Q ss_pred --------CcEEEeeCCC--ccc-hheeccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 54 --------CSIRLWNLDN--KTC-VQEITAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 54 --------~~v~iwd~~~--~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
+.|.+.|..+ ++. ++.+... ....++.++|||+++ +++..+.++.++|
T Consensus 246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 246 AAGDYQELNGVKVVDGRKEASSLFTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp HHTCSEEETTEEEEECSGGGCCSSEEEEEEE-----SSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred cCCCeeEECcEEEEeCcccCCceeEEEEecC-----CCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence 2367777766 333 3444432 355778999999985 5555667777764
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.11 E-value=0.013 Score=36.38 Aligned_cols=63 Identities=6% Similarity=-0.063 Sum_probs=47.9
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheecccc
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHR 74 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~ 74 (106)
+.+.++|+.+++.+..+... .....+.+.|.+... +++.. .++.|.++|+.+++.++.+....
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l--~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASD--NYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCE--EEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEE--EEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 34669999999987776653 246678888888753 45666 58999999999999888887553
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.05 E-value=0.11 Score=31.24 Aligned_cols=48 Identities=6% Similarity=0.084 Sum_probs=32.3
Q ss_pred EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc-CCCCEE-EEecCC
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH-PSKPFI-ASAGAD 99 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~-~s~~~d 99 (106)
.++...++.|..|+. +++.+..+..+. ..+.+++|. |++..+ ++...+
T Consensus 244 wva~~~~~~v~~~d~-~g~~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 244 WNARWGEGAVDRYDT-DGNHIARYEVPG----KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEETTTEEEEECT-TCCEEEEEECSC----SBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEeCCCEEEEECC-CCCEEEEEECCC----CCcEEEEEecCCCCEEEEEecCC
Confidence 345444578999998 566666666555 678999998 887654 444433
No 246
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.99 E-value=0.037 Score=33.47 Aligned_cols=28 Identities=7% Similarity=-0.015 Sum_probs=22.9
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.....+++.+++.++++...++.|..||
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 3455688999999999988889998885
No 247
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.66 E-value=0.16 Score=30.10 Aligned_cols=82 Identities=7% Similarity=-0.095 Sum_probs=45.8
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc-cccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH-RKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~ 83 (106)
.++.|..|+. +++. ..+.. .......+.+.+.+.. +++...++.|..|+.. ++. ..+... .......+..
T Consensus 65 ~~~~i~~~~~-~g~~-~~~~~--~~~~~~gl~~d~dG~l---~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 65 VGRRVLGWRE-DGTV-DVLLD--ATAFTNGNAVDAQQRL---VHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TTTEEEEEET-TSCE-EEEEE--SCSCEEEEEECTTSCE---EEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCC
T ss_pred CCCEEEEEeC-CCCE-EEEeC--CCCccceeeECCCCCE---EEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCC
Confidence 4567777777 3332 22222 1223445666666553 4555556789999886 542 222111 1000135677
Q ss_pred EEEcCCCCEEEE
Q psy17135 84 VAFHPSKPFIAS 95 (106)
Q Consensus 84 ~~~~~~~~~~~s 95 (106)
+.+.|++.++++
T Consensus 136 i~~d~dG~l~~t 147 (305)
T 3dr2_A 136 LIVARDGAIWFT 147 (305)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCCEEEe
Confidence 899999998886
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.60 E-value=0.16 Score=29.95 Aligned_cols=80 Identities=8% Similarity=-0.125 Sum_probs=42.5
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|..+|.. ++........ ..........+ ... +..++.++.+..+|.. ++....+.... ..+..+
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~~~-~g~---l~vgt~~~~l~~~d~~-g~~~~~~~~~~----~~~~~~ 182 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKTK--KAIYATPIVSE-DGT---IYVGSNDNYLYAINPD-GTEKWRFKTND----AITSAA 182 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECS--SCCCSCCEECT-TSC---EEEECTTSEEEEECTT-SCEEEEEECSS----CCCSCC
T ss_pred cCCEEEEEcCC-CCEEEEEcCC--CceeeeeEEcC-CCE---EEEEcCCCEEEEECCC-CCEeEEEecCC----Cceeee
Confidence 35778888887 6654443332 11122222222 333 4567777888889887 66554444333 344455
Q ss_pred EEcCCCCEEEEe
Q psy17135 85 AFHPSKPFIASA 96 (106)
Q Consensus 85 ~~~~~~~~~~s~ 96 (106)
...+++.+++..
T Consensus 183 ~~d~~g~l~v~t 194 (330)
T 3hxj_A 183 SIGKDGTIYFGS 194 (330)
T ss_dssp EECTTCCEEEES
T ss_pred EEcCCCEEEEEe
Confidence 555555544443
No 249
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.57 E-value=0.23 Score=33.06 Aligned_cols=89 Identities=9% Similarity=0.075 Sum_probs=49.6
Q ss_pred ceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccc--hheeccccccCCCC
Q psy17135 7 SVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTC--VQEITAHRKKFDES 80 (106)
Q Consensus 7 ~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~--~~~~~~~~~~~~~~ 80 (106)
+.|.++|+.++. ....+... .. .....+.+.+... ++.... .+.|..+|+.++.. ...+..+. ..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~--~~-~~~~~~~~~g~~l--~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGD--LD-ADVSLVDNKGSTL--YLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER----QQ 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECS--SS-SCEEEEEEETTEE--EEEECTTCTTCEEEEEETTSCCGGGCEEEECCC----SS
T ss_pred cEEEEEECCCCCCceEEEeCC--CC-ceEEEEeccCCEE--EEEECCCCCCCEEEEEeCCCCCccccEEEecCC----CC
Confidence 578888887663 22233221 11 2222255656553 334433 36788899987654 34555555 44
Q ss_pred eEEEEEcCCCCEEEEec-CCC--eEEEcC
Q psy17135 81 ILDVAFHPSKPFIASAG-ADG--LAKVFV 106 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~-~d~--~i~iwd 106 (106)
+. .|++++..|+... .++ .+++|+
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 44 8888888766555 344 455553
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.32 E-value=0.21 Score=29.32 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~ 83 (106)
.++.+.+||.++++.+..+.... ....+. +.+.. |.....+..+.++|..+.+.++.+...... .-..++.
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~---~Gwglt--~dg~~---L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPG---EGWALT--SDDSH---LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSS---CCCEEE--ECSSC---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred eCCEEEEEECCcCcEEEEEeCCC---CceEEe--eCCCE---EEEECCCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence 47889999999999988777642 223333 34444 333344778999999998877776543210 0024455
Q ss_pred EEEcCCCCEEEEecCCCeEEEc
Q psy17135 84 VAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d~~i~iw 105 (106)
+.+. ++..++....+..|.+.
T Consensus 155 Le~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 155 LEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEE-TTEEEEEETTTTEEEEE
T ss_pred eEEe-CCEEEEEECCCCeEEEE
Confidence 5555 56666655555555544
No 251
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.14 E-value=0.36 Score=31.06 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=51.7
Q ss_pred eEEEEeCcc-----CceeeecccCCCCCCCCeeEe-----------e--eCCCCceEEEeeCCCCcEEEeeCCCc----c
Q psy17135 8 VIYIWTLLE-----LQTYARNDCPELNSEPPACQT-----------I--PSSNISLFDSRPGHDCSIRLWNLDNK----T 65 (106)
Q Consensus 8 ~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~s~~~d~~v~iwd~~~~----~ 65 (106)
.|.+-|+.. ++.+.+...+....+..-.-| . +.... +++++-.+..|.++|..+. +
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~--l~v~~l~s~~I~viD~~t~p~~p~ 121 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRF--LIVPGLRSSRIYIIDTKPNPREPK 121 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCE--EEEEBTTTCCEEEEECCSCTTSCE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCE--EEEccCCCCeEEEEECCCCCCCce
Confidence 466777775 666666555432212222223 2 22333 3678888899999998744 3
Q ss_pred chheecc-----ccccCCCCeEEEEEcCCCCEEEEecCC------CeEEEcC
Q psy17135 66 CVQEITA-----HRKKFDESILDVAFHPSKPFIASAGAD------GLAKVFV 106 (106)
Q Consensus 66 ~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~i~iwd 106 (106)
..+.+.. ... ...-..+...|++ +++++..+ +.+.+.|
T Consensus 122 ~~k~ie~~~~~~~~g--~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 122 IIKVIEPEEVKKVSG--YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp EEEEECHHHHHHHHC--EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred eeeeechhhcccccC--CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 3444421 010 0234556788999 66665554 5566554
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.12 E-value=0.17 Score=34.13 Aligned_cols=81 Identities=9% Similarity=-0.096 Sum_probs=45.4
Q ss_pred ceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCccchhe--eccccccCC
Q psy17135 7 SVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKTCVQE--ITAHRKKFD 78 (106)
Q Consensus 7 ~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~~~ 78 (106)
.+|+++|+.++ +.+.. .. ........|+|++... +-...+ ..|..+++.+++.... +.....
T Consensus 201 ~~l~v~dl~~g~~~l~~-~~---~~~~~~~~WspDg~~l---~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~--- 270 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIAD-KV---SGTNGEIVWGPDHTSL---FYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP--- 270 (751)
T ss_dssp EEEEEEETTCTTCCCCC-CE---EEECSCCEECSSTTEE---EEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT---
T ss_pred EEEEEEECCCCCEeCCc-cc---cCceeeEEEecCCCEE---EEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC---
Confidence 35888898887 53211 11 1113457799988763 222222 2577778876643222 221110
Q ss_pred CCeEEEEEcCCCCEEEEec
Q psy17135 79 ESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~ 97 (106)
.....+.|+||+++|+..+
T Consensus 271 ~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp TCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEECCCCCEEEEEe
Confidence 3456778999999865444
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.66 E-value=0.19 Score=32.98 Aligned_cols=49 Identities=18% Similarity=0.175 Sum_probs=30.8
Q ss_pred CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
++.+..||+.+++.+-...... ....-.....+..++.++.|+.++.+|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-----~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-----PLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-----CCcccceEeCCCEEEEECCCCcEEEEE
Confidence 5789999999998776554332 111111112355677788888888765
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.55 E-value=0.35 Score=31.69 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=31.2
Q ss_pred CCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 52 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.++.+..||..+++.+..+.... .+....+...+..++.++.|+.++.+|
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-----~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-----AAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-----CCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCC-----CccceeEEECCCEEEEEcCCCeEEEEE
Confidence 45789999999998776654332 122222222345666678888888765
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.38 E-value=0.7 Score=30.88 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=29.8
Q ss_pred cEEEeeCCCccchheeccccc-cC----CCCeEEEEEcCCCC---EEEEecCCCeEEEcC
Q psy17135 55 SIRLWNLDNKTCVQEITAHRK-KF----DESILDVAFHPSKP---FIASAGADGLAKVFV 106 (106)
Q Consensus 55 ~v~iwd~~~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~---~~~s~~~d~~i~iwd 106 (106)
.|..+|.++|+.+..++.... .. ........+..++. .++.++.+|.++++|
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD 330 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLD 330 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEE
Confidence 488999999987766653210 00 01222222333554 577788888877764
No 256
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.97 E-value=0.73 Score=29.56 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=58.9
Q ss_pred CceEEEEeCccCceeeecccCC--CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------hheec
Q psy17135 6 SSVIYIWTLLELQTYARNDCPE--LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------VQEIT 71 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~~~~~ 71 (106)
++.||+-++......+.+..+. ....+..+..+|.+.. ++..+ +..|.+..+..+.. .+.+.
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~l---LAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~ 115 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDL---LCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYS 115 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSE---EEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEE
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCE---EEEec-CCeEEEEEecCccccCcccccccccceeEEE
Confidence 5677877777444333444431 2224556777887776 55554 45788888773320 01121
Q ss_pred cccc--cCCCCeEEEEEcC---CCCEEEEecCCCeEEEcC
Q psy17135 72 AHRK--KFDESILDVAFHP---SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~--~~~~~v~~~~~~~---~~~~~~s~~~d~~i~iwd 106 (106)
-.+. .....|..+.||| .+..++.--.|+.|++||
T Consensus 116 l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yD 155 (452)
T 3pbp_A 116 IDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFD 155 (452)
T ss_dssp GGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEE
T ss_pred cCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEE
Confidence 1110 0126799999999 455788889999999996
No 257
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.74 E-value=0.51 Score=30.27 Aligned_cols=73 Identities=14% Similarity=0.047 Sum_probs=48.2
Q ss_pred CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccc-----cCCCCeEEEEEcCCCCEEEE--ecCCC
Q psy17135 30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRK-----KFDESILDVAFHPSKPFIAS--AGADG 100 (106)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~s--~~~d~ 100 (106)
..+..+.|+|.+..+..+++-..|+.|++||+.... +. .+..... .....+.+++|..++-.|.. ..++|
T Consensus 125 s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~G 203 (452)
T 3pbp_A 125 SSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGG 203 (452)
T ss_dssp CCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSC
T ss_pred CceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCC
Confidence 456779999998876567888899999999998632 22 2221110 01156788899886654444 55777
Q ss_pred eEE
Q psy17135 101 LAK 103 (106)
Q Consensus 101 ~i~ 103 (106)
.|+
T Consensus 204 DIY 206 (452)
T 3pbp_A 204 DIF 206 (452)
T ss_dssp EEE
T ss_pred CEE
Confidence 765
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.71 E-value=0.72 Score=30.60 Aligned_cols=84 Identities=10% Similarity=0.035 Sum_probs=43.9
Q ss_pred eEEEEeCccCceeeecccCCCCCCC-CeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSEP-PACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
.+.+||..+++.......+...... ....+...+.. ++.|+ .+..+.+||..+.+-...-.-+.. ..-..+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~l---yv~GG~~~~~v~~yd~~t~~W~~~~~~~~~---R~~~s~~ 293 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQI---VVTGGNDAKKTSLYDSSSDSWIPGPDMQVA---RGYQSSA 293 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCE---EEECSSSTTCEEEEEGGGTEEEECCCCSSC---CSSCEEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCE---EEeCCCCCCceEEecCcCCceeECCCCCcc---ccccceE
Confidence 6788888877653222221111111 12334444444 56666 456799999876642211111111 1123445
Q ss_pred EcCCCCEEEEec
Q psy17135 86 FHPSKPFIASAG 97 (106)
Q Consensus 86 ~~~~~~~~~s~~ 97 (106)
..+++++++.|+
T Consensus 294 ~~~dg~iyv~GG 305 (656)
T 1k3i_A 294 TMSDGRVFTIGG 305 (656)
T ss_dssp ECTTSCEEEECC
T ss_pred EecCCeEEEEeC
Confidence 566888888888
No 259
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.90 E-value=0.43 Score=35.27 Aligned_cols=84 Identities=8% Similarity=0.168 Sum_probs=56.3
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~ 84 (106)
..+++|+|+.+.+.+..+.. +..++-..|......+ ++|.. .|..|++.. ..+.+.+.-|.......|...
T Consensus 85 g~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~~l~--lVT~~---aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY 156 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINY 156 (1630)
T ss_pred CCeEEEeehHHhhhhccccc---CCCceEEEecCCCeeE--EEcCC---eEEEeccCCCCccHHHHhcchhcccCeeEEe
Confidence 46788889888776666665 3346678888877765 55554 699999974 355666655543223567777
Q ss_pred EEcCCCCEEEEec
Q psy17135 85 AFHPSKPFIASAG 97 (106)
Q Consensus 85 ~~~~~~~~~~s~~ 97 (106)
..+++.+|++-.|
T Consensus 157 ~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 157 RTDAKQKWLLLTG 169 (1630)
T ss_pred eeCCCCCeEEEEe
Confidence 7788888865433
No 260
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.55 E-value=0.86 Score=26.29 Aligned_cols=91 Identities=7% Similarity=-0.129 Sum_probs=46.7
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~ 83 (106)
..+.|..+|+........... .......+.+.+.+... +++-...+.|.+++++... ...+. ... .....
T Consensus 56 ~~~~I~~~~~~g~~~~~~~~~--~~~~p~~ia~d~~~~~l--yv~d~~~~~I~~~~~~g~~-~~~~~~~~~----~~P~~ 126 (267)
T 1npe_A 56 SEPSIGRASLHGGEPTTIIRQ--DLGSPEGIALDHLGRTI--FWTDSQLDRIEVAKMDGTQ-RRVLFDTGL----VNPRG 126 (267)
T ss_dssp TTTEEEEEESSSCCCEEEECT--TCCCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCS-CEEEECSSC----SSEEE
T ss_pred CCCEEEEEecCCCCcEEEEEC--CCCCccEEEEEecCCeE--EEEECCCCEEEEEEcCCCC-EEEEEECCC----CCccE
Confidence 345677777655432111111 11234446666654442 4566667789888886432 22222 121 45678
Q ss_pred EEEcCCCC-EEEEecC--CCeEEE
Q psy17135 84 VAFHPSKP-FIASAGA--DGLAKV 104 (106)
Q Consensus 84 ~~~~~~~~-~~~s~~~--d~~i~i 104 (106)
+++.|++. .+++... .+.|..
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~ 150 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIET 150 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEE
Confidence 89999544 4444433 345543
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.74 E-value=1.2 Score=26.19 Aligned_cols=85 Identities=11% Similarity=-0.069 Sum_probs=43.5
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.++.|..+|.. ++.+...... ..........+.+ . +..++ +.+..+| .+++......... ..+.++
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~d~~g-~---l~v~t--~~l~~~d-~~g~~~~~~~~~~----~~~~~~ 220 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTN--DAITSAASIGKDG-T---IYFGS--DKVYAIN-PDGTEKWNFYAGY----WTVTRP 220 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECS--SCCCSCCEECTTC-C---EEEES--SSEEEEC-TTSCEEEEECCSS----CCCSCC
T ss_pred CCCEEEEECCC-CCEeEEEecC--CCceeeeEEcCCC-E---EEEEe--CEEEEEC-CCCcEEEEEccCC----cceece
Confidence 35778888887 6664444432 2222223222222 2 23344 6788888 6666554444333 445566
Q ss_pred EEcCCCCEEEEecCCCeEEE
Q psy17135 85 AFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 85 ~~~~~~~~~~s~~~d~~i~i 104 (106)
...+++.+.+.. .++.+..
T Consensus 221 ~~~~~g~l~v~t-~~~gl~~ 239 (330)
T 3hxj_A 221 AISEDGTIYVTS-LDGHLYA 239 (330)
T ss_dssp EECTTSCEEEEE-TTTEEEE
T ss_pred EECCCCeEEEEc-CCCeEEE
Confidence 666666544433 3444443
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.67 E-value=0.47 Score=29.22 Aligned_cols=98 Identities=11% Similarity=0.007 Sum_probs=53.4
Q ss_pred CCceEEEEeCc---cCceeeecccCCC-----------CCCCCeeEeeeCCCCceEEEeeCCC-CcEEEeeCCCccchhe
Q psy17135 5 PSSVIYIWTLL---ELQTYARNDCPEL-----------NSEPPACQTIPSSNISLFDSRPGHD-CSIRLWNLDNKTCVQE 69 (106)
Q Consensus 5 ~d~~i~iwd~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~~~~~~~~ 69 (106)
.+..|..+|+. +++.+....+... ......+...+.++. .++++.. +.|...+.+.. .+..
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna---YVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS---YVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE---EEEEEESSCEEEEECTTSC-CEEE
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE---EEeCCCCCCeEEEEeCCCC-EEee
Confidence 46778889988 7776544432110 011223444444443 5666666 66666655433 2222
Q ss_pred ecccc--ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 70 ITAHR--KKFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 70 ~~~~~--~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
+.... .......+.++++|++..|+....++.+..+|
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 21111 00114577899999998877776687776543
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.35 E-value=1.4 Score=26.34 Aligned_cols=91 Identities=14% Similarity=-0.084 Sum_probs=49.1
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchhe-eccccccCCCCe
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQE-ITAHRKKFDESI 81 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~-~~~~~~~~~~~v 81 (106)
...|+..|+.+.+....... ......+.|.+.+... +++-...+.|..+++... ..... +.... ...
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~---~~~p~g~~~d~~~~~l--y~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p 79 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDRAHGVSSYDTVISRDI----QAP 79 (316)
T ss_dssp BSSEEEEETTSCCCEEEECS---CSSEEEEEEETTTTEE--EEEETTTTEEEEEEC--------CEEEECSSC----SCC
T ss_pred CCeEEEEECCCcceEehhcC---CCceEEEEEEeCCCEE--EEEECCCCcEEEEECCCCCCCcccEEEEeCCC----CCc
Confidence 45688889887664333222 2235567777765553 466667788998988751 22222 22121 344
Q ss_pred EEEEEcC-CCCEEEEecCCCeEEEc
Q psy17135 82 LDVAFHP-SKPFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~-~~~~~~s~~~d~~i~iw 105 (106)
..+++.+ .+.++++-...+.|.+.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVA 104 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEE
Confidence 6677775 44455555555555543
No 264
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.01 E-value=1.8 Score=26.95 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=35.2
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
..-..-|.+.++|+.++.++..-+-.. +.|+..+.+....-++...+.|.|
T Consensus 275 yviTK~G~ihlyDleTgt~i~~nrIS~----d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCS----SCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEEeCCcEEEEEEcccCcEEEEeccCC----CceEEecccCCCCcEEEEcCCCEE
Confidence 444556899999999999987776665 666666655544455555566654
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.90 E-value=2 Score=27.11 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=40.0
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF 105 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw 105 (106)
..+.+.|..... +++-..++.|..++..++........... .....++|+|+++ .+++-...+.|..+
T Consensus 229 ~giavdp~~g~l--yv~d~~~~~V~~~~~~~~~~~~~~~~~~~---~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 229 NGAETHPINGEL--YFNSWNAGQVFRYDFTTQETTPLFTIQDS---GWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp CCEEECTTTCCE--EEEETTTTEEEEEETTTTEEEEEEECSSS---SCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCEE--EEEECCCCEEEEEECCCCcEEEEEEcCCC---CcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 445555633332 45555667888888876543211211110 3467899999998 56666667777664
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=90.86 E-value=1.9 Score=26.73 Aligned_cols=89 Identities=10% Similarity=-0.151 Sum_probs=45.5
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF 86 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 86 (106)
..|+..++........... ......+.|.+..... +++-...+.|..+++..+.....+.... .....+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~---~~~~~gl~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~~~~----~~p~glav 166 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN---LENAIALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVSTGL----ESPGGLAV 166 (386)
T ss_dssp SCEEEECTTSCCCEEEECS---CSCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCCEEEEECSSC----SCCCCEEE
T ss_pred ccceeeccCCCcEEEEecC---CCccEEEEEecCCCeE--EEEeCCCCcEEEEecCCCCcEEEEeCCC----CCccEEEE
Confidence 3456666654443212111 2234557777665553 4566667788888887554222222221 23455666
Q ss_pred cC-CCCEEEEecCCCeEEE
Q psy17135 87 HP-SKPFIASAGADGLAKV 104 (106)
Q Consensus 87 ~~-~~~~~~s~~~d~~i~i 104 (106)
.+ .+.++++-...+.|.+
T Consensus 167 d~~~g~lY~~d~~~~~I~~ 185 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEV 185 (386)
T ss_dssp ETTTTEEEEEETTTTEEEE
T ss_pred EeCCCeEEEEcCCCCeEEE
Confidence 65 3444555555555544
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.83 E-value=1.6 Score=25.94 Aligned_cols=83 Identities=8% Similarity=-0.035 Sum_probs=44.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESILD 83 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~ 83 (106)
++.|..+|..+++....... ......+.+.+.+... +++-...+.|..+++..... ...+.... . ...
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~l--yv~d~~~~~I~~~~~~~~~~~~~~~~~~~~----g-P~g 233 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFV--LVAEFLSHQIVKYWLEGPKKGTAEVLVKIP----N-PGN 233 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEE--EEEEGGGTEEEEEESSSTTTTCEEEEEECS----S-EEE
T ss_pred CceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEE--EEEeCCCCeEEEEECCCCcCCccceEEeCC----C-CCC
Confidence 45666777665543111111 1224456777766642 34545667899998875321 11121111 2 566
Q ss_pred EEEcCCCCEEEEecC
Q psy17135 84 VAFHPSKPFIASAGA 98 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~ 98 (106)
+++.+++.++++...
T Consensus 234 i~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 234 IKRNADGHFWVSSSE 248 (322)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred eEECCCCCEEEEecC
Confidence 788888887666543
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.11 E-value=2.1 Score=28.44 Aligned_cols=84 Identities=8% Similarity=-0.018 Sum_probs=44.7
Q ss_pred eEEEEeCccCceeeecccCCCCCC-CCeeEeeeCCCCceEEEeeCCC-----------CcEEEeeCCCccc--hheeccc
Q psy17135 8 VIYIWTLLELQTYARNDCPELNSE-PPACQTIPSSNISLFDSRPGHD-----------CSIRLWNLDNKTC--VQEITAH 73 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~d-----------~~v~iwd~~~~~~--~~~~~~~ 73 (106)
.|.+||..+.+.........+..+ ...+...|.+.. ++.|+.+ ..+.+||..+.+- +......
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i---~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGST---FITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCE---EEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCE---EEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 567777776665332201111222 223344555554 5667643 4578899876542 2222222
Q ss_pred cccCCCCeEEEEEcCCCCEEEEecC
Q psy17135 74 RKKFDESILDVAFHPSKPFIASAGA 98 (106)
Q Consensus 74 ~~~~~~~v~~~~~~~~~~~~~s~~~ 98 (106)
+ ....+..+.|++++++.|+.
T Consensus 510 R----~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 R----VYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp C----CTTEEEEECTTSCEEEEECC
T ss_pred c----ccccHhhcCCCcEEEecCCC
Confidence 2 23334456789999999884
No 269
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.76 E-value=1.8 Score=24.90 Aligned_cols=91 Identities=10% Similarity=-0.177 Sum_probs=50.8
Q ss_pred ceEEEEeCccCceee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135 7 SVIYIWTLLELQTYA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI 81 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v 81 (106)
+.|+.+|+....... .... .......+.+.+.+... +++-..++.|..++...+.....+.... ...
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~--~~~~~~gi~~d~~~~~l--y~~d~~~~~I~~~~~~g~~~~~~~~~~~----~~p 81 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHI--PAKVIIGLAFDCVDKVV--YWTDISEPSIGRASLHGGEPTTIIRQDL----GSP 81 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEE--EEEEEEEEEEETTTTEE--EEEETTTTEEEEEESSSCCCEEEECTTC----CCE
T ss_pred CeEEEEEecCcccccccceeeecC--CCCcEEEEEEecCCCEE--EEEECCCCEEEEEecCCCCcEEEEECCC----CCc
Confidence 467778876543210 0111 01123456666655543 4566667889999987654322222222 467
Q ss_pred EEEEEcCCC-CEEEEecCCCeEEEc
Q psy17135 82 LDVAFHPSK-PFIASAGADGLAKVF 105 (106)
Q Consensus 82 ~~~~~~~~~-~~~~s~~~d~~i~iw 105 (106)
..+++.+++ ..+++....+.|.++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEE
Confidence 888999854 455665556666554
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=88.36 E-value=2.6 Score=24.84 Aligned_cols=69 Identities=13% Similarity=0.058 Sum_probs=45.4
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
....+.|.|.+... +++...++.|...|.. ++.++.+.-... .....+++.+++.++++.-.++.+.++
T Consensus 28 ~lSGla~~~~~~~L--~aV~d~~~~I~~ld~~-g~v~~~i~l~g~---~D~EGIa~~~~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 28 NISSLTWSAQSNTL--FSTINKPAAIVEMTTN-GDLIRTIPLDFV---KDLETIEYIGDNQFVISDERDYAIYVI 96 (255)
T ss_dssp CEEEEEEETTTTEE--EEEEETTEEEEEEETT-CCEEEEEECSSC---SSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred CcceeEEeCCCCEE--EEEECCCCeEEEEeCC-CCEEEEEecCCC---CChHHeEEeCCCEEEEEECCCCcEEEE
Confidence 45558888876542 4556668888888987 777776643221 467788888888776665555555543
No 271
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=88.22 E-value=2.1 Score=28.86 Aligned_cols=53 Identities=17% Similarity=-0.144 Sum_probs=29.9
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN 63 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~ 63 (106)
...|+..++.+.+....... ......+.|.+..... +++-...+.|+.+++..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~---~~~p~gla~d~~~~~L--y~sD~~~~~I~~~~~~g 437 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDR 437 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC---CTTCCCCEEETTTTEE--EECCTTTTSBEEEESCC
T ss_pred ccceEEEeCCCCcceeeecc---CcceEEEccccccCeE--EEEecCCCeEEEEecCC
Confidence 34667777766554222221 2235567777765552 45556667888888865
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.99 E-value=2.8 Score=24.79 Aligned_cols=55 Identities=13% Similarity=-0.046 Sum_probs=32.8
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeEEEEEc---CCCCEEEE
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESILDVAFH---PSKPFIAS 95 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~---~~~~~~~s 95 (106)
..+...+.+.. .++....+.|.+++.. ++. +..+.... ....+++|. |++..|..
T Consensus 215 ~gi~vd~dG~l---~va~~~~~~V~~~~~~-G~~~~~~~~~~~~----~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 215 DDFAFDVEGNL---YGATHIYNSVVRIAPD-RSTTIIAQAEQGV----IGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp SSEEEBTTCCE---EEECBTTCCEEEECTT-CCEEEEECGGGTC----TTEEEEEECCSTTTTTEEEE
T ss_pred CCeEECCCCCE---EEEeCCCCeEEEECCC-CCEEEEeeccccc----CCceEEEEecccCCCCEEEE
Confidence 33555555543 4565566789999875 543 22233232 567899998 78665433
No 273
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.07 E-value=0.7 Score=32.93 Aligned_cols=23 Identities=17% Similarity=0.362 Sum_probs=20.5
Q ss_pred EEeeCCCCcEEEeeCCCccchhe
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQE 69 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~ 69 (106)
+++-+.|+++|+|++.+++++.+
T Consensus 252 lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 252 LVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp EEEEBTTCEEEEEETTTTEEEEE
T ss_pred EEEEeCCCEEEEEECCCCCeEEe
Confidence 78999999999999999987665
No 274
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=86.99 E-value=5.4 Score=27.00 Aligned_cols=93 Identities=6% Similarity=-0.086 Sum_probs=44.5
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHRKKFDESILDV 84 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 84 (106)
.+.|.+.++........... .......+.+.|..... +++-. ..+.|...++.... ...+..... .....+
T Consensus 474 ~~~I~v~d~dg~~~~~l~~~--~~~~P~giavDp~~g~l--y~td~~~~~~I~~~~~dG~~-~~~l~~~~l---~~PnGl 545 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTLFRE--QGSKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVD-IYSLVTENI---QWPNGI 545 (699)
T ss_dssp TSCEEEEBSSSCCEEEECCC--SSCCCCCEECCSSSSCC--EECCCSSSCCEEBCCSSSCC-CCEESCSSC---SSCCCE
T ss_pred CCeEEEEecCCCceEEEEeC--CCCCcceEEEccCCCcE--EEcccCCCCeEEEEeCCCCC-eeEEEeCCC---CCccEE
Confidence 45666676654433111111 11223445555654442 33432 23677777665322 222211110 345678
Q ss_pred EEcCC-CCEEEEecCCCeEEEcC
Q psy17135 85 AFHPS-KPFIASAGADGLAKVFV 106 (106)
Q Consensus 85 ~~~~~-~~~~~s~~~d~~i~iwd 106 (106)
+++|+ +.++++-...+.|..++
T Consensus 546 avd~~~~~LY~aD~~~~~I~~~d 568 (699)
T 1n7d_A 546 TLDLLSGRLYWVDSKLHSISSID 568 (699)
T ss_dssp EECTTTCCEEEEETTTTEEEEEC
T ss_pred EEeccCCEEEEEecCCCeEEEEc
Confidence 88875 45566666666666543
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=86.80 E-value=3.7 Score=24.99 Aligned_cols=67 Identities=12% Similarity=-0.081 Sum_probs=36.7
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~i 104 (106)
...+.|.+..... +.+-...+.|..+++..+.....+.... .....+++.+ .+.++++-...+.|.+
T Consensus 75 ~~~l~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~ly~~d~~~~~I~~ 142 (349)
T 3v64_C 75 AIALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYWTDSGTSRIEV 142 (349)
T ss_dssp EEEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEEeccccEE--EEEeccCCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCeEEEEcCCCCeEEE
Confidence 4556777665553 4565667788888887554222222222 3445667765 4444555555555544
No 276
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.14 E-value=0.61 Score=32.64 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=20.9
Q ss_pred EEeeCCCCcEEEeeCCCccchhee
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
+.+-+.|+++|+|++.+++++.+.
T Consensus 250 lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 250 LVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCEEEEEECCCCCeEeee
Confidence 789999999999999999876653
No 277
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=86.01 E-value=5.4 Score=26.03 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=36.3
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
..-..-|.+.++|+.++.++..-+-.. +.|+..+.+....-++...+.|.|
T Consensus 274 yviTK~G~i~lyDleTgt~i~~nrIs~----~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCS----SCEEEEEEETTTTEEEEEETTCEE
T ss_pred EEEecCceEEEEecccceeeeeecccC----CceEEecccCCCCcEEEEccCceE
Confidence 445556899999999999987776665 677766666555556665666655
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=85.62 E-value=5 Score=25.36 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=38.4
Q ss_pred eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135 35 CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF 105 (106)
Q Consensus 35 ~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw 105 (106)
+.+.|..... +++-..++.|..++..++.....+..... ...-..++++|++. ++++-...+.|+.+
T Consensus 233 iavd~~~G~l--yv~d~~~~~V~~~d~~~g~~~~~~~~~~~--~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 233 CAVHPQNGKI--YYTRYHHAMISSYDPATGTLTEEEVMMDT--KGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp CEECTTTCCE--EECBTTCSEEEEECTTTCCEEEEEEECSC--CSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEeCCCCeE--EEEECCCCEEEEEECCCCeEEEEEeccCC--CCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 4445533331 45555667888888876654223321110 02335699999998 55666666777653
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.00 E-value=4.3 Score=23.99 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=36.0
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 97 (106)
...+.|.+.+.. +++-..++.|..+|...+ ....+. .. .....+++.++++++++..
T Consensus 34 pegia~~~~g~l---yv~d~~~~~I~~~d~~g~-~~~~~~-~~----~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 34 LENLASAPDGTI---FVTNHEVGEIVSITPDGN-QQIHAT-VE----GKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp EEEEEECTTSCE---EEEETTTTEEEEECTTCC-EEEEEE-CS----SEEEEEEECTTSCEEEEEE
T ss_pred cceEEECCCCCE---EEEeCCCCeEEEECCCCc-eEEEEe-CC----CCceeEEEcCCCcEEEEec
Confidence 344667675543 566667788988887653 222222 22 4678889999988766553
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.34 E-value=6.2 Score=24.58 Aligned_cols=90 Identities=13% Similarity=-0.095 Sum_probs=46.3
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheecc-ccccCCCCeE
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITA-HRKKFDESIL 82 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~~~~v~ 82 (106)
..|+..|+........... ......+.|.+..... +.+-...+.|+.+++.... ....+.. .. ....
T Consensus 92 ~~I~~i~l~~~~~~~~~~~---~~~~~~l~~d~~~~~l--ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p~ 162 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDRAHGVSSYDTVISRDI----QAPD 162 (400)
T ss_dssp TEEEEECTTSCSCEEEECS---CSCEEEEEEETTTTEE--EEEETTTTEEEEEEC------CCCEEEECSSC----SCEE
T ss_pred ceeEEEccCCcceeEeccc---cCcceEEeeeeccCce--EEEecCCCeEEEEEcccCCCCCcceEEEeCCC----CCcc
Confidence 4566666665443222211 2235567777765553 4565666788888876521 1122222 22 4566
Q ss_pred EEEEcC-CCCEEEEecCCCeEEEc
Q psy17135 83 DVAFHP-SKPFIASAGADGLAKVF 105 (106)
Q Consensus 83 ~~~~~~-~~~~~~s~~~d~~i~iw 105 (106)
.+++.+ .+.++++-...+.|.+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEE
Confidence 777776 45555555555565543
No 281
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=82.09 E-value=1.1 Score=30.67 Aligned_cols=24 Identities=21% Similarity=0.537 Sum_probs=20.9
Q ss_pred EEeeCCCCcEEEeeCCCccchhee
Q psy17135 47 DSRPGHDCSIRLWNLDNKTCVQEI 70 (106)
Q Consensus 47 ~~s~~~d~~v~iwd~~~~~~~~~~ 70 (106)
+++-+.|+++|+|++.+++++...
T Consensus 234 LftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 234 LIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCeEEEEEcCCCceEEee
Confidence 789999999999999999876554
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=81.74 E-value=7.4 Score=24.29 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=51.0
Q ss_pred CCceEEEEeCc-------cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-----ccchheec-
Q psy17135 5 PSSVIYIWTLL-------ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-----KTCVQEIT- 71 (106)
Q Consensus 5 ~d~~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-----~~~~~~~~- 71 (106)
.+|.+..|++. +.+.+..+... +....|...+.... |..+-++.-|-.++.+. ++.+..+.
T Consensus 151 k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~---Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 151 KEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGR---LYIAEEDEAIWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp SSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTE---EEEEETTTEEEEEECSTTSCSCCEEEEEBSS
T ss_pred CCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCe---EEEecccceEEEEeCCcCCCCCceEEEEecC
Confidence 45778888883 33444455542 33445666666666 67787775555555442 23333321
Q ss_pred cccccCCCCeEEEEE--cCCCC-E-EEEecCCCeEEEcC
Q psy17135 72 AHRKKFDESILDVAF--HPSKP-F-IASAGADGLAKVFV 106 (106)
Q Consensus 72 ~~~~~~~~~v~~~~~--~~~~~-~-~~s~~~d~~i~iwd 106 (106)
.+- ...+..+++ .+++. + ++|+-.+.+..+||
T Consensus 225 g~l---~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 225 RHL---TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp SSB---CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred Ccc---ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 122 146777877 45555 4 45554566666664
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=81.19 E-value=8 Score=24.37 Aligned_cols=88 Identities=7% Similarity=-0.065 Sum_probs=44.3
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC----cEEEeeCCCccch--heeccccccCCCC
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC----SIRLWNLDNKTCV--QEITAHRKKFDES 80 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~----~v~iwd~~~~~~~--~~~~~~~~~~~~~ 80 (106)
+.|+.+|+.++....... .......+.+.+.+... +++...++ .+...+. .+... ..+. .. ..
T Consensus 159 ~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~l--yvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~----~~ 227 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSM--IITNDQNNNDRPNNYILTR-ESGFKVITELT-KG----QN 227 (430)
T ss_dssp EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEE--EEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-EC----SS
T ss_pred CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEE--EEEeCCCCcccceEEEEeC-CCceeeeeeec-cC----CC
Confidence 567777776655422222 12234456777766632 34443222 2333332 23221 1222 11 34
Q ss_pred eEEEEEcC-CCCEEEEecCCCeEEEc
Q psy17135 81 ILDVAFHP-SKPFIASAGADGLAKVF 105 (106)
Q Consensus 81 v~~~~~~~-~~~~~~s~~~d~~i~iw 105 (106)
...++++| ++.++++-..++.|..+
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~ 253 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRY 253 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEE
Confidence 56777888 77777776666776655
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=80.99 E-value=7.3 Score=23.73 Aligned_cols=66 Identities=12% Similarity=-0.031 Sum_probs=34.7
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCC-CEEEEecCC-CeEEE
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSK-PFIASAGAD-GLAKV 104 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d-~~i~i 104 (106)
..+.+.+.+... +++-...+.|.+.+++.......+.... .....+++.|.+ .++++-... +.|..
T Consensus 119 ~glavd~~~g~l--y~~d~~~~~I~~~~~dG~~~~~l~~~~l----~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 119 GGLAVDWVHDKL--YWTDSGTSRIEVANLDGAHRKVLLWQSL----EKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp CEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECTTC----SCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred cEEEEecCCCeE--EEEcCCCCeEEEEcCCCCceEEEEeCCC----CCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 344444444432 4566666788888876443222222222 456788888844 445554443 44443
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=80.59 E-value=11 Score=25.62 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=42.2
Q ss_pred eEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-ch--heeccccccCCCCeEE
Q psy17135 8 VIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CV--QEITAHRKKFDESILD 83 (106)
Q Consensus 8 ~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~--~~~~~~~~~~~~~v~~ 83 (106)
.|..+++.+++......... .........|+|++....+.........+.++|+.++. .. ..+.... ......
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---~~~~~s 324 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE---KGVRYD 324 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC---TTCCEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC---CCceEE
Confidence 57777776654211111111 11123346788888775332222234557788887652 12 3332222 134455
Q ss_pred EEEcCCCCEEEEecCC
Q psy17135 84 VAFHPSKPFIASAGAD 99 (106)
Q Consensus 84 ~~~~~~~~~~~s~~~d 99 (106)
+.|+..+.+++....+
T Consensus 325 ~~~~~g~~l~~~t~~~ 340 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEG 340 (751)
T ss_dssp EEEETTTEEEEEECTT
T ss_pred EeeeeCCEEEEEeCCC
Confidence 5555444445554443
No 286
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=79.96 E-value=15 Score=26.71 Aligned_cols=50 Identities=12% Similarity=0.212 Sum_probs=31.8
Q ss_pred CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCC------CCEEEEecC-CCeEEEc
Q psy17135 53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPS------KPFIASAGA-DGLAKVF 105 (106)
Q Consensus 53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~s~~~-d~~i~iw 105 (106)
.+.+.+++++.++. ....... ....|.|+++.|. ..+++.|.. |++++++
T Consensus 531 g~~l~~fel~~~~L-~~~~~~~--l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 531 GRALYYLQIHPQEL-RQISHTE--MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp TTEEEEEEEETTEE-EEEEEEE--CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred CCEEEEEEeeCCce-eeecccC--CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 46777777765532 2221111 1268999998763 367888886 9999886
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=79.92 E-value=10 Score=24.77 Aligned_cols=69 Identities=7% Similarity=-0.018 Sum_probs=40.1
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCC-------Cccc-----------hheeccccccCCCCeEEEEEcCCCCE-E
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLD-------NKTC-----------VQEITAHRKKFDESILDVAFHPSKPF-I 93 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~-------~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 93 (106)
..+...|..... +++-..++.|..+|+. ++.. ...+..... ...-+.++|+|++.. +
T Consensus 250 ~giavdp~~g~L--Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~--~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 250 NGATIHPINGEL--YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD--PSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp CCEEECTTTCCE--EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS--SSCCEEEEECTTSSEEE
T ss_pred eEEEEcCCCCeE--EEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC--CCCceEEEEcCCCCEEE
Confidence 344455544442 4666677788888886 4443 112211110 034578999999984 5
Q ss_pred EEecCCCeEEEc
Q psy17135 94 ASAGADGLAKVF 105 (106)
Q Consensus 94 ~s~~~d~~i~iw 105 (106)
++-...+.|+.+
T Consensus 326 vaD~~~h~I~ki 337 (496)
T 3kya_A 326 FGVINNHYFMRS 337 (496)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeCCCCEEEEE
Confidence 666666777653
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=79.87 E-value=7.1 Score=22.97 Aligned_cols=91 Identities=9% Similarity=-0.040 Sum_probs=49.2
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hheeccc--cccCCCC
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAH--RKKFDES 80 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~--~~~~~~~ 80 (106)
++.|...|+. ++.+.+..... ....-.+.+.+.+.. +++.-.++.+.++++..... +....-. .......
T Consensus 48 ~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~---~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g 122 (255)
T 3qqz_A 48 PAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQF---VISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCG 122 (255)
T ss_dssp TEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEE---EEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSC
T ss_pred CCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEE---EEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCC
Confidence 5677778887 66656554421 122334555544432 45555567788887765332 1222100 0001156
Q ss_pred eEEEEEcCCCCEEEEecCCCe
Q psy17135 81 ILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~~d~~ 101 (106)
...++|.|.+..|..+.....
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p 143 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNP 143 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSS
T ss_pred cceEEEeCCCCEEEEEECcCC
Confidence 789999998766555554433
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=79.78 E-value=11 Score=25.11 Aligned_cols=21 Identities=5% Similarity=-0.064 Sum_probs=16.9
Q ss_pred CCceEEEEeCccCceeeeccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDC 25 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~ 25 (106)
.++.|+.+|.++++.+-++..
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEES
T ss_pred CCCeEEEEECCCCcEEEEEcC
Confidence 478999999999998665544
No 290
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=79.72 E-value=8.6 Score=23.79 Aligned_cols=64 Identities=13% Similarity=-0.033 Sum_probs=32.6
Q ss_pred eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCC-CeEE
Q psy17135 34 ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGAD-GLAK 103 (106)
Q Consensus 34 ~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d-~~i~ 103 (106)
.+.+.+.+... +++-...+.|.+.+++.......+.... .....+++.|.+. ++++-... +.|.
T Consensus 163 glavd~~~g~l--Y~~d~~~~~I~~~~~dg~~~~~l~~~~l----~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 163 GLAVDWVHDKL--YWTDSGTSRIEVANLDGAHRKVLLWQSL----EKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp CEEEETTTTEE--EEEETTTTEEEECBTTSCSCEEEECSSC----SCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEEeCCCeE--EEEcCCCCeEEEEeCCCCceEEeecCCC----CCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 34444444432 4555666778888776433222222222 4567788887544 34443333 4443
No 291
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.51 E-value=6.7 Score=27.66 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=23.4
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.++...++..++++-+.|+++|+|+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWs 263 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLD 263 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEE
Confidence 466777788888999999999999995
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=68.74 E-value=18 Score=22.43 Aligned_cols=28 Identities=7% Similarity=0.141 Sum_probs=19.8
Q ss_pred CCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135 79 ESILDVAFHPSKPFI-ASAGADGLAKVFV 106 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~-~s~~~d~~i~iwd 106 (106)
...+.++|+|+++.+ ++-+..+.|..|+
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence 467889999999764 5555566776653
No 293
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=67.03 E-value=17 Score=21.47 Aligned_cols=31 Identities=10% Similarity=-0.045 Sum_probs=21.2
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT 65 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~ 65 (106)
...+.+.+.+.. +.++..++.|..|+..++.
T Consensus 21 p~~i~~d~~g~~---l~v~~~~~~i~~~~~~~~~ 51 (322)
T 2fp8_A 21 PNSFTFDSTNKG---FYTSVQDGRVIKYEGPNSG 51 (322)
T ss_dssp CCCEECCTTCSS---EEEECTTSEEEEECCTTTC
T ss_pred ceEEEEcCCCCE---EEEEcCCCeEEEECCCCCc
Confidence 445666666554 5677778889989887654
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=66.08 E-value=17 Score=21.15 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=27.9
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~ 65 (106)
...+.+||..+.+.......+.... ...+. .. +... ++.|+.+ ..+.+||+.+.+
T Consensus 174 ~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~-~~-~~~i--~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 174 LNSVEKYDPHTGHWTNVTPMATKRS-GAGVA-LL-NDHI--YVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCB-SCEEE-EE-TTEE--EEECCBCSSSBCCCEEEEETTTTE
T ss_pred cceEEEEeCCCCcEEeCCCCCcccc-cceEE-EE-CCEE--EEEeCCCCCcccceEEEEeCCCCc
Confidence 3567888888776633322221111 11222 22 2221 4556543 457888987764
No 295
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.88 E-value=19 Score=21.50 Aligned_cols=65 Identities=3% Similarity=-0.169 Sum_probs=33.7
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCC-CeEE
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGAD-GLAK 103 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d-~~i~ 103 (106)
..+.+.+.+... +++-...+.|.+.++........+.... .....+++.|.+. .+++.... +.|.
T Consensus 80 ~glavd~~~~~l--y~~d~~~~~I~~~~~~g~~~~~~~~~~~----~~P~~iavdp~~g~ly~~d~~~~~~I~ 146 (316)
T 1ijq_A 80 DGLAVDWIHSNI--YWTDSVLGTVSVADTKGVKRKTLFRENG----SKPRAIVVDPVHGFMYWTDWGTPAKIK 146 (316)
T ss_dssp CEEEEETTTTEE--EEEETTTTEEEEEETTSSSEEEEEECTT----CCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CEEEEeecCCeE--EEEECCCCEEEEEeCCCCceEEEEECCC----CCcceEEeCCCCCEEEEEccCCCCeEE
Confidence 344444434332 3555667788888886433222222222 4667888888544 34443322 4444
No 296
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=62.72 E-value=20 Score=20.87 Aligned_cols=55 Identities=11% Similarity=0.096 Sum_probs=27.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~ 65 (106)
...+.+||..+.+.......+.... ...+. ...+.. ++.|+.+ ..+.+||..+.+
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~-~~~~~i---yv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRS-GAGVG-VLNNLL---YAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCB-SCEEE-EETTEE---EEECCBSSSSBCCCEEEEETTTTE
T ss_pred ccEEEEEeCCCCcEEECCCCccccc-cccEE-EECCEE---EEECCCCCCcccceEEEEeCCCCC
Confidence 3458888988776533322222111 11222 222222 4556543 357788887664
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=61.85 E-value=26 Score=21.81 Aligned_cols=66 Identities=9% Similarity=-0.092 Sum_probs=32.6
Q ss_pred CeeEeeeCCCCceEEEee-CCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE-EEEecCCCeEEE
Q psy17135 33 PACQTIPSSNISLFDSRP-GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGADGLAKV 104 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~i~i 104 (106)
..+...|..... +.+- +..+.|...+++.......+...- .....+++.+++.. +++-...+.|..
T Consensus 205 ~~iavdp~~g~l--y~td~~~~~~I~~~~~dG~~~~~~~~~~l----~~P~glavd~~~~~lY~aD~~~~~I~~ 272 (400)
T 3p5b_L 205 RAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVDIYSLVTENI----QWPNGITLDLLSGRLYWVDSKLHSISS 272 (400)
T ss_dssp EEEEEETTTTEE--EEEECSSSCCEEEEETTSCSCEEEECSSC----SCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceEEEecccCeE--EEEeCCCCCEEEEEeCCCCccEEEEECCC----CceEEEEEEeCCCEEEEEECCCCEEEE
Confidence 345555554442 2333 334677777775432222222222 45677888875444 444444455544
No 298
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=61.73 E-value=12 Score=18.66 Aligned_cols=24 Identities=4% Similarity=-0.125 Sum_probs=19.1
Q ss_pred CCceEEEEeCccCceeeecccCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPEL 28 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~ 28 (106)
+-..|.+||..+|+++..+.....
T Consensus 15 ~~E~V~IvNvnNG~RfeTYvI~Ge 38 (97)
T 1uhe_A 15 EGMKVEIVDVNNGERFSTYVILGK 38 (97)
T ss_dssp TTCEEEEEETTTCCEEEEECEEEC
T ss_pred CCCEEEEEECCCCceEEEEEEeec
Confidence 456899999999999888776543
No 299
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=61.55 E-value=28 Score=22.03 Aligned_cols=100 Identities=6% Similarity=-0.095 Sum_probs=52.0
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cccch--heeccccc-----
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCV--QEITAHRK----- 75 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~--~~~~~~~~----- 75 (106)
.++.|+.+|..++.....+...........+.+.|.+... +++-...+.|..++.. ++... ..+.+...
T Consensus 248 ~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L--Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~ 325 (433)
T 4hw6_A 248 HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA--YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWV 325 (433)
T ss_dssp TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE--EEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCB
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE--EEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccC
Confidence 4566777777755541111111011112247778877632 4666777889887765 23211 11111100
Q ss_pred ------cCCCCeEEEEE---------cCCCCEEEEecCCCeEEEcC
Q psy17135 76 ------KFDESILDVAF---------HPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ------~~~~~v~~~~~---------~~~~~~~~s~~~d~~i~iwd 106 (106)
..-.....+++ .+++.++++-...+.|+.++
T Consensus 326 dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 326 DGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp CEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 00023456788 66777777777777777653
No 300
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=60.78 E-value=39 Score=23.51 Aligned_cols=67 Identities=10% Similarity=-0.027 Sum_probs=31.9
Q ss_pred CCeeEeeeCCCCceEEEee-CCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRP-GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~i 104 (106)
...+...|..... +++- +..+.|...++........+.... .....+++.+... ++++-.....|..
T Consensus 516 P~gIaVDp~~g~L--YwtD~g~~~~I~~~~~dG~~~~~lv~~~l----~~P~GLavD~~~~~LYwaD~~~~~I~~ 584 (791)
T 3m0c_C 516 PRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVDIYSLVTENI----QWPNGITLDLLSGRLYWVDSKLHSISS 584 (791)
T ss_dssp EEEEEEETTTTEE--EEEECSSSCEEEEEETTSCCEEEEECSSC----SCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEEecCCCCE--EEecCCCCCeEEEEecCCCceEEEEeCCC----CCceEEEEecCCCeEEEEeCCCCcEEE
Confidence 3345555554442 2333 333667777775433222222222 4567777776433 4444344444443
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=60.52 E-value=25 Score=21.15 Aligned_cols=67 Identities=12% Similarity=-0.060 Sum_probs=33.9
Q ss_pred CeeEeeeCCCCceEEEee-CCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135 33 PACQTIPSSNISLFDSRP-GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF 105 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw 105 (106)
..+...|..... +.+- +..+.|...+++. .....+..... .....++++|++. ++++-...+.|..+
T Consensus 125 ~giavdp~~g~l--y~td~~~~~~I~r~~~dG-~~~~~~~~~~l---~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 125 RAIALDPSSGFM--YWTDWGEVPKIERAGMDG-SSRFIIINSEI---YWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp EEEEEEGGGTEE--EEEECSSSCEEEEEETTS-CSCEEEECSSC---SCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEeCCCCEE--EEEecCCCCEEEEEEcCC-CCeEEEEECCC---CCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 345555554442 2333 3356777777753 22222221111 3557888988444 45555555666543
No 302
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=60.41 E-value=47 Score=24.30 Aligned_cols=93 Identities=5% Similarity=0.070 Sum_probs=47.8
Q ss_pred ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC-CceEEEeeC----------CCCcEEEeeCCCccchheeccccc
Q psy17135 7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN-ISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAHRK 75 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~ 75 (106)
+.|++.|-.+.+.+..+..+... .+.++....... ...+++.|. ..|.+.++++..++ ++.+...+-
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE-~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~~v 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNE-YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEKEV 884 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTE-EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEEEE
T ss_pred EEEEEEeCCCCeEEEEEeCCCCc-ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEEEc
Confidence 56889998888877666664322 233333222211 112234332 34778899886443 332222111
Q ss_pred cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 76 KFDESILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+.++.-- +|..+++. ..++++|+
T Consensus 885 --~g~v~al~~~-~g~Lla~i--g~~l~vy~ 910 (1158)
T 3ei3_A 885 --KGAVYSMVEF-NGKLLASI--NSTVRLYE 910 (1158)
T ss_dssp --SSCEEEEEEE-TTEEEEEE--TTEEEEEE
T ss_pred --CCcCEEEeee-CCEEEEEc--CCEEEEEE
Confidence 2677777532 35545444 35666664
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=58.79 E-value=25 Score=20.55 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=27.9
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----CcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----CSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----~~v~iwd~~~~~ 65 (106)
...+.+||..+.+.......+.... ...+ ....+.. ++.|+.+ ..+.++|..+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~-~~~~~~l---yv~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRR-DAAC-VFWDNVV---YILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCB-SCEE-EEETTEE---EEECCBSSSBCCEEEEEETTTTE
T ss_pred CceEEEecCCCCCEecCCCCCcccc-eeEE-EEECCEE---EEEeCCCCCCcceEEEEeCCCCe
Confidence 3467888988877633333222111 1122 2222222 4566544 457778887764
No 304
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=57.46 E-value=27 Score=20.54 Aligned_cols=67 Identities=10% Similarity=-0.093 Sum_probs=36.1
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc--C--CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK--F--DESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~--~--~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
....+.++|.+.. ... .++.+.-.+..++..-. +.....+ . -....++.|.|++.+.++ .|+.|+-+
T Consensus 42 ~~~~laf~P~G~L----YaV-~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 42 NFKFLFLSPGGEL----YGV-LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TCSEEEECTTSCE----EEE-ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred cceeEEECCCccE----EEE-eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEe
Confidence 3557888884442 333 56666655554432211 1111100 0 012467888999998888 56887654
No 305
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=57.43 E-value=16 Score=18.41 Aligned_cols=24 Identities=0% Similarity=-0.075 Sum_probs=19.2
Q ss_pred CCceEEEEeCccCceeeecccCCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPEL 28 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~ 28 (106)
+-..|.+||+.+|+++..+.....
T Consensus 16 ~~E~V~I~NvnNG~Rf~TYvI~Ge 39 (102)
T 3plx_B 16 EYEKVQVVNVNNGARFETYTIATQ 39 (102)
T ss_dssp TTCEEEEEETTTCCEEEEECEEES
T ss_pred CCCEEEEEECCCCcEEEEEEEEcC
Confidence 456899999999999888776544
No 306
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.83 E-value=8.3 Score=26.56 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=17.8
Q ss_pred CCceEEEEeCccCceeeeccc
Q psy17135 5 PSSVIYIWTLLELQTYARNDC 25 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~ 25 (106)
.|.++|+||+++++++.....
T Consensus 239 ~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 239 QNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTCEEEEEETTTTEEEEEEET
T ss_pred cCCeEEEEEcCCCceEEeecc
Confidence 588999999999998776665
No 307
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=55.03 E-value=70 Score=24.64 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=30.8
Q ss_pred EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
.....-|.+.++|+.++.++..-+-.. ..|+..+.+....-++...+.|.|
T Consensus 274 y~itk~G~~~~~d~~t~~~i~~~ris~----~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 274 FLITKYGYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred EEEecCceEEEEecccchhhhhccccC----CceEEeccCCCCCceEEEcCCceE
Confidence 445566899999999999886655444 455554444333334443444443
No 308
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.12 E-value=8.5 Score=27.68 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=21.7
Q ss_pred CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPFIASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd 106 (106)
.+.+++..++..++++-+.|+++|+|+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWs 265 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLD 265 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEE
Confidence 344455667888999999999999995
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=52.50 E-value=50 Score=22.18 Aligned_cols=92 Identities=10% Similarity=-0.158 Sum_probs=47.8
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA 85 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 85 (106)
...|+..|+.+.......... .-.....+.|.+..... +.+-..++.|..+++........+.... .....++
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~l~~d~~~~~l--ywtD~~~~~I~r~~~~g~~~~~v~~~g~----~~P~GlA 86 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLT-GVKEASALDFDVTDNRI--YWTDISLKTISRAFMNGSALEHVVEFGL----DYPEGMA 86 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCC-SCSCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECSSC----SCCCEEE
T ss_pred CCcEEEEECCCCCcceEEEcC-CCCceEEEEEECCCCEE--EEEECCCCeEEEEECCCCCcEEEEeCCC----CCcceEE
Confidence 356777788765432222221 11234567777766553 4666677888888886543222222111 2345666
Q ss_pred EcCC-CCEEEEecCCCeEEE
Q psy17135 86 FHPS-KPFIASAGADGLAKV 104 (106)
Q Consensus 86 ~~~~-~~~~~s~~~d~~i~i 104 (106)
+.+. +.++++-...+.|.+
T Consensus 87 vD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp EETTTTEEEEEETTTTEEEE
T ss_pred EEeCCCEEEEEECCCCEEEE
Confidence 6653 334455444444443
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=50.34 E-value=62 Score=22.59 Aligned_cols=58 Identities=2% Similarity=-0.170 Sum_probs=32.2
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCC-CCEEEEe
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPS-KPFIASA 96 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~ 96 (106)
..+++.+.+... +++-...+.|.+.++.... ...+..... .....+++.|. +.++++-
T Consensus 474 ~GLAvD~~~~~L--Y~tD~~~~~I~v~~ldG~~-~~~l~~~~l---~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 474 DGLAVDWIHSNI--YWTDSVLGTVSVADTKGVK-RKTLFRENG---SKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp CEEEEETTTTEE--EEEETTTTEEEEEETTSSS-EEEEEECTT---CCEEEEEEETTTTEEEEEE
T ss_pred ceeeeeecCCcE--EEEecCCCeEEEEeCCCCe-EEEEEeCCC---CCcceEEEecCCCCEEEec
Confidence 345444444332 4666777888888886443 333322221 45678888885 4444443
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=49.91 E-value=43 Score=20.75 Aligned_cols=27 Identities=15% Similarity=0.136 Sum_probs=20.7
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.....++|.|++.++++.-..+.|+++
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v 58 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRV 58 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEE
Confidence 466788899998888777657777665
No 312
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=48.69 E-value=25 Score=17.55 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=18.7
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.+||..+|+++..+....
T Consensus 16 ~~E~V~IvNvnNG~Rf~TYvI~G 38 (96)
T 1vc3_B 16 PFEQVDIYDITNGARLTTYALPG 38 (96)
T ss_dssp TTCEEEEEETTTCCEEEEECEEE
T ss_pred CCCEEEEEECCCCceEEEEEEEc
Confidence 45689999999999988877654
No 313
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=47.83 E-value=60 Score=21.75 Aligned_cols=93 Identities=10% Similarity=-0.062 Sum_probs=46.6
Q ss_pred CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEE
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILD 83 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~ 83 (106)
+...|+..|+............ .-.....+.+.+..... +.+-...+.|..++++...... .+.... .....
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~-~~~~~~~ld~~~~~~~l--y~sD~~~~~I~r~~~~g~~~~~~v~~~~~----~~P~G 88 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLI--YWSDVSEEAIKRTEFNKTESVQNVVVSGL----LSPDG 88 (619)
T ss_dssp CSSBEEEECCC---------CB-CCSCEEEEEEETTTTEE--EEEETTTTEEEEEEC-----CEEEECSSC----SCEEE
T ss_pred ccccEEEEeCCCCcceEEEEEc-CCCceEEEEEEeCCCEE--EEEECCCCeEEEEEccCCCceEEEEeCCC----CCcCe
Confidence 5677888888764321122211 12234567777766553 4555566788888886543211 222222 45677
Q ss_pred EEEcC-CCCEEEEecCCCeEEE
Q psy17135 84 VAFHP-SKPFIASAGADGLAKV 104 (106)
Q Consensus 84 ~~~~~-~~~~~~s~~~d~~i~i 104 (106)
+++.+ .+.++++-...+.|.+
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v 110 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEV 110 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEecCCEEEEEeCCCCEEEE
Confidence 88887 4445566555666654
No 314
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=47.74 E-value=28 Score=17.92 Aligned_cols=23 Identities=4% Similarity=-0.094 Sum_probs=18.3
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||+.+|+++..+....
T Consensus 43 ~~E~V~I~NvnNG~Rf~TYvI~G 65 (114)
T 3oug_A 43 ENEKVQVVNLNNGERLETYVIKG 65 (114)
T ss_dssp TTBEEEEEETTTCCEEEEEEEEE
T ss_pred cCCEEEEEECCCCceEEEEEEEc
Confidence 45689999999999888776643
No 315
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.94 E-value=50 Score=22.35 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=24.7
Q ss_pred cEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEe
Q psy17135 55 SIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASA 96 (106)
Q Consensus 55 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~ 96 (106)
.+..++..+++....+..... ..++.++|+||++.|+.+
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~---aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCC---ccccCCEECCCCCEEEEE
Confidence 355556656664444443321 578999999999886554
No 316
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=46.19 E-value=66 Score=21.70 Aligned_cols=37 Identities=5% Similarity=0.015 Sum_probs=25.1
Q ss_pred EEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEe
Q psy17135 57 RLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASA 96 (106)
Q Consensus 57 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~ 96 (106)
.+.+..+++..+-+..+.. ..++.+.|+||++.|+..
T Consensus 512 ~~~~~~~g~~~rf~~~P~g---aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 512 LCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCeEEEEEeCCCC---ccCcCeeECCCCCEEEEE
Confidence 3345555665555555553 789999999999887654
No 317
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=44.64 E-value=34 Score=18.38 Aligned_cols=23 Identities=13% Similarity=0.326 Sum_probs=18.6
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||..+|+.+..+....
T Consensus 57 ~~EkV~IvNvnNG~RfeTYvI~G 79 (143)
T 1pqh_A 57 ENEAIDIWNVTNGKRFSTYAIAA 79 (143)
T ss_dssp TTCEEEEEETTTCCEEEEEEEEE
T ss_pred CCCEEEEEECCCCceEEEEEEEc
Confidence 45689999999999988876643
No 318
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=43.41 E-value=5.4 Score=25.78 Aligned_cols=15 Identities=13% Similarity=0.485 Sum_probs=9.6
Q ss_pred CCceEEEEeCccCce
Q psy17135 5 PSSVIYIWTLLELQT 19 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~ 19 (106)
++|.|++||++....
T Consensus 165 ~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 165 RDGVVRVWDVKNAEL 179 (577)
T ss_dssp -CCEECSEECSCGGG
T ss_pred CCCeEEEEecCCHHH
Confidence 467777777776543
No 319
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=41.92 E-value=40 Score=18.02 Aligned_cols=23 Identities=4% Similarity=-0.106 Sum_probs=18.6
Q ss_pred CCceEEEEeCccCceeeecccCC
Q psy17135 5 PSSVIYIWTLLELQTYARNDCPE 27 (106)
Q Consensus 5 ~d~~i~iwd~~~~~~~~~~~~~~ 27 (106)
+-..|.|||..+|+.+..+....
T Consensus 40 ~~EkV~IvNvnNG~RfeTYvI~G 62 (139)
T 2c45_A 40 EGEQVTIVDIDNGARLVTYAITG 62 (139)
T ss_dssp SSCCEEEEETTTCCEEEECEEEE
T ss_pred CCCEEEEEECCCCceEEEEEEEc
Confidence 45679999999999988876654
No 320
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=41.56 E-value=65 Score=20.34 Aligned_cols=86 Identities=8% Similarity=0.070 Sum_probs=49.4
Q ss_pred CCCceEEEEeCccC--ceeeecccCCC----CCCCCeeEee---eC--CCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135 4 VPSSVIYIWTLLEL--QTYARNDCPEL----NSEPPACQTI---PS--SNISLFDSRPGHDCSIRLWNLDNKTCVQEITA 72 (106)
Q Consensus 4 ~~d~~i~iwd~~~~--~~~~~~~~~~~----~~~~~~~~~~---~~--~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~ 72 (106)
..-.+|.+||+++. +.+.++..+.. .+....+... |. .......++-+....+-++|+.+++.-+....
T Consensus 120 ~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~ 199 (381)
T 3q6k_A 120 SHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP 199 (381)
T ss_dssp CCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG
T ss_pred CCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC
Confidence 34668999999999 88888776532 1222333333 11 11222235555567788999998764332210
Q ss_pred c--cc------------cCCCCeEEEEEcCC
Q psy17135 73 H--RK------------KFDESILDVAFHPS 89 (106)
Q Consensus 73 ~--~~------------~~~~~v~~~~~~~~ 89 (106)
+ .. ....++..++++|+
T Consensus 200 ~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 200 TFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccccCcceEECCEEeEeccCceEEEecCC
Confidence 0 00 01257888999987
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=39.78 E-value=60 Score=19.41 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=17.3
Q ss_pred cEEEeeCCCccc--hheeccccccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135 55 SIRLWNLDNKTC--VQEITAHRKKFDESILDVAFHPSKPFIASAGAD 99 (106)
Q Consensus 55 ~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 99 (106)
.+.+||+.+.+- +..+.... ..-.++ ..++.+++.|+.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r----~~~~~~--~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGR----AYGVSL--PWNNSLLIIGGET 326 (357)
T ss_dssp CCEEEECC---CEEEEECSSCC----BSSEEE--EETTEEEEEEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCc----ccceeE--EeCCEEEEEeeeC
Confidence 466788876542 22222222 222222 2356677777754
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=39.11 E-value=68 Score=19.83 Aligned_cols=61 Identities=11% Similarity=-0.127 Sum_probs=34.9
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC--CCceEEEeeCCCCcEEEeeCCCccc
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS--NISLFDSRPGHDCSIRLWNLDNKTC 66 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~v~iwd~~~~~~ 66 (106)
..||.|.-.|..+|+..-.+... ......... .+.. ....+++..+.||.+..++..+|..
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~-~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~ 79 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQ-EPSRLETYETLIIEPFGDGNIYYFNAHQGLQ 79 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGG-GSCCSEECC-CSCTTTSSEEEEECCSTTTEEEEEETTTEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCC-ccCCcEEec-CCccccCCcEEEEEECCCCEEEEEECCCCcE
Confidence 46899999999999986666553 101111110 1111 1122223336899999999887743
No 323
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=36.31 E-value=62 Score=18.61 Aligned_cols=62 Identities=6% Similarity=-0.044 Sum_probs=33.0
Q ss_pred CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC-CceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135 4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN-ISLFDSRPGHDCSIRLWNLDNKTCVQEIT 71 (106)
Q Consensus 4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~v~iwd~~~~~~~~~~~ 71 (106)
.++|+|++-+.+++.|+..... ++.. .-...+. ...+-+-...+|.++|-++.+++|+....
T Consensus 105 ~p~G~VqFvN~~TgtCL~ay~n-----Gvv~-~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 105 KHREYFRFVNQSLGTCVEAYGN-----GLIH-DICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp SSTTCEEEEETTTCCEEEEETT-----EEEE-ECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred cCCCEEEEEECCCCceeeeccC-----CeEE-ecCCCCCcccEEEEecCCCccEEEEECCCCccCCccC
Confidence 4678888888888777655332 0100 0001011 11222233446777877888888877543
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=35.72 E-value=67 Score=18.79 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=27.7
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~ 65 (106)
...+.+||+.+.+.......+.... ...+... +... ++.|+.+ ..+.+||+.+.+
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~--~~~i--yv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMNTIRS-GAGVCVL--HNCI--YAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCB-SCEEEEE--TTEE--EEECCBCSSSBCCCEEEEETTTTE
T ss_pred CceEEEEeCCCCeEeeCCCCCCccc-cceEEEE--CCEE--EEEeCCCCCCccceEEEEeCCCCc
Confidence 3567888888776533322221111 1222222 2221 4555543 457888887764
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=33.82 E-value=73 Score=18.67 Aligned_cols=55 Identities=5% Similarity=-0.026 Sum_probs=27.4
Q ss_pred CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC-C-----CcEEEeeCCCcc
Q psy17135 6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH-D-----CSIRLWNLDNKT 65 (106)
Q Consensus 6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-d-----~~v~iwd~~~~~ 65 (106)
...+.+||..+.+.......+... .........+.. ++.|+. + ..+.++|..+.+
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~i---yv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSHMDLV---YVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEE---EEECCBCTTSCBCCCEEEEETTTTE
T ss_pred cceEEEECCCCCcEeECCCCCCcc--cceeEEEECCEE---EEEeCCCCCCcccceEEEEeCCCCe
Confidence 456888998887653332222111 111222222222 455554 2 357788887653
No 326
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=33.60 E-value=89 Score=19.59 Aligned_cols=90 Identities=12% Similarity=0.066 Sum_probs=48.0
Q ss_pred CceEEEEeCc--cCceeeeccc---C--CCCCCCCe-eEee-eCCCCceEEEeeCCCCcEEEeeCC---Cc----cchhe
Q psy17135 6 SSVIYIWTLL--ELQTYARNDC---P--ELNSEPPA-CQTI-PSSNISLFDSRPGHDCSIRLWNLD---NK----TCVQE 69 (106)
Q Consensus 6 d~~i~iwd~~--~~~~~~~~~~---~--~~~~~~~~-~~~~-~~~~~~~~~~s~~~d~~v~iwd~~---~~----~~~~~ 69 (106)
+++|.+|++. +++ +..... + ..-..... |.|. |.... .+++....++.+..|++. ++ +.+++
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~-~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGK-YYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCC-EEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCc-EEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 6889999773 333 233311 1 11122333 4443 33332 224566667899888873 22 34555
Q ss_pred eccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135 70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102 (106)
Q Consensus 70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i 102 (106)
+... ..+..+...+....|..+-.+..|
T Consensus 176 f~lg-----sq~EgcvvDd~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 176 FKMN-----SQTEGMAADDEYGRLYIAEEDEAI 203 (355)
T ss_dssp EECS-----SCEEEEEEETTTTEEEEEETTTEE
T ss_pred ecCC-----CCcceEEEcCCCCeEEEecccceE
Confidence 5433 466677777766666666666443
No 327
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=32.85 E-value=80 Score=18.85 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=32.4
Q ss_pred CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc---ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA---HRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
..+.+.+.+.. ++.+. ++.+ .+..+.|+.=..+.. .. ..+..+.|.+++ .++.++.+|.+.-+
T Consensus 253 ~~v~~~~~~~~---~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~----~~~~~v~~~~~~-~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 253 LDLAYRTPNEV---WLAGG-AGAL-LCSQDGGQTWQQDVDVKKVP----SNFYKILFFSPD-QGFILGQKGILLRY 318 (327)
T ss_dssp EEEEESSSSCE---EEEES-TTCE-EEESSTTSSCEECGGGTTSS----SCCCEEEEEETT-EEEEECSTTEEEEE
T ss_pred EEEEecCCCEE---EEEeC-CCeE-EEeCCCCcccEEcCccCCCC----CCeEEEEEECCC-ceEEEcCCceEEEE
Confidence 34555553332 34444 5666 345554542222221 12 467788886544 46666678877654
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=32.51 E-value=1.2e+02 Score=20.81 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=49.7
Q ss_pred CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---------hheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135 31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---------VQEITAHRKKFDESILDVAFHPSKPFIASAGADGL 101 (106)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 101 (106)
....+...|++.+. ++++.-+.++.++|.+.-.. -..+.+.. ...-+....+|.++|.-..|..-|..
T Consensus 324 sPHGv~vsPDGkyi--~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYF--IAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEE--EEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCcceeeCCCCCEE--EEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCCCcccEEEECCCCceEeeeeecce
Confidence 35677888988886 67888889999999874211 01111111 01246778899999976788888888
Q ss_pred EEEcC
Q psy17135 102 AKVFV 106 (106)
Q Consensus 102 i~iwd 106 (106)
|.-|+
T Consensus 401 vvkWn 405 (638)
T 3sbq_A 401 VVKWN 405 (638)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88774
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=30.27 E-value=75 Score=19.41 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=15.1
Q ss_pred CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135 79 ESILDVAFHPSKPFIASAGADGLAKVF 105 (106)
Q Consensus 79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw 105 (106)
.....++|.|+++++++-. ++.|+++
T Consensus 29 ~~P~~ia~~pdG~l~V~e~-~g~I~~~ 54 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTER-PGRLVLI 54 (354)
T ss_dssp SCEEEEEEEETTEEEEEET-TTEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeC-CCEEEEE
Confidence 3456677777776555543 3666554
No 330
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=27.96 E-value=54 Score=18.56 Aligned_cols=27 Identities=22% Similarity=0.294 Sum_probs=16.7
Q ss_pred CeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135 80 SILDVAFHPSKPF-IASAGADGLAKVFV 106 (106)
Q Consensus 80 ~v~~~~~~~~~~~-~~s~~~d~~i~iwd 106 (106)
.+.++.|...+.+ ++..+.++++.+||
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFD 147 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFD 147 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeC
Confidence 4445556654433 55566788888876
No 331
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=27.87 E-value=76 Score=17.00 Aligned_cols=24 Identities=8% Similarity=0.080 Sum_probs=20.7
Q ss_pred cCCCceEEEEeCccCceeeecccC
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDCP 26 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~~ 26 (106)
++.++.|.+-|..+++.+..++..
T Consensus 54 ~v~~~~v~LlD~et~eelE~fpl~ 77 (140)
T 2cy5_A 54 RVSPSQVTLLDPVSKEELESYPLD 77 (140)
T ss_dssp EECSSEEEEECTTTCCEEEEEEGG
T ss_pred EECCCeEEEEccCccchhhcCChh
Confidence 568899999999999988888873
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.03 E-value=1.5e+02 Score=19.98 Aligned_cols=67 Identities=13% Similarity=-0.030 Sum_probs=34.6
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~i 104 (106)
...+.|.+..... +++-...+.|+.+++........+.... .....+++.. .+.++++-...+.|.+
T Consensus 351 ~~~ld~d~~~~~l--y~sD~~~~~I~r~~~~g~~~~~v~~~~~----~~p~GlAvD~~~~~lY~tD~~~~~I~v 418 (619)
T 3s94_A 351 AIAIDYDPVEGYI--YWTDDEVRAIRRSFIDGSGSQFVVTAQI----AHPDGIAVDWVARNLYWTDTGTDRIEV 418 (619)
T ss_dssp EEEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCeE--EEEeCCCCeEEEEEcCCCccEEEEECCC----CCcCceEEecccCcEEEEeCCCCcEEE
Confidence 3446666654442 4555566778888776433222222222 3455677765 4445555555555543
No 333
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=26.48 E-value=1.2e+02 Score=18.84 Aligned_cols=65 Identities=12% Similarity=0.101 Sum_probs=37.8
Q ss_pred CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eecccc--ccCCCCeEEEEE---cCCCCEEEE
Q psy17135 29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHR--KKFDESILDVAF---HPSKPFIAS 95 (106)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~--~~~~~~v~~~~~---~~~~~~~~s 95 (106)
+...-+..|.+..... +++.-..++|..|+...+.... .+..-. ......+..+.+ .|++++++.
T Consensus 12 ~~yPE~~~wd~~~g~~--~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVF--YQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp TCCCSCEEEETTTTEE--EEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred ccCCcCccCcCCCCEE--EEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEE
Confidence 3445567788765553 5566678999999987553222 222100 000024578888 577777664
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=25.35 E-value=1.1e+02 Score=17.95 Aligned_cols=15 Identities=7% Similarity=0.111 Sum_probs=10.7
Q ss_pred CceEEEEeCccCcee
Q psy17135 6 SSVIYIWTLLELQTY 20 (106)
Q Consensus 6 d~~i~iwd~~~~~~~ 20 (106)
...+.+||..+.+..
T Consensus 174 ~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 174 TNRVFIYNPKKGDWK 188 (318)
T ss_dssp CCCEEEEETTTTEEE
T ss_pred cceEEEEcCCCCEEE
Confidence 346888998887653
No 335
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.24 E-value=1.5e+02 Score=19.51 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=48.8
Q ss_pred ceEEEEeCccCceeeecccCC-CCCCCCeeEe-------eeCCCCceEEEeeCCCC------cEEEeeCCC-ccch----
Q psy17135 7 SVIYIWTLLELQTYARNDCPE-LNSEPPACQT-------IPSSNISLFDSRPGHDC------SIRLWNLDN-KTCV---- 67 (106)
Q Consensus 7 ~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~s~~~d~------~v~iwd~~~-~~~~---- 67 (106)
+.|++.|++++.......... .......+.| .+.+... +++...++ .|.+++... +...
T Consensus 162 ~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~l--yvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~ 239 (496)
T 3kya_A 162 KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYM--IVAIDYDGKGDESPSVYIIKRNADGTFDDRSD 239 (496)
T ss_dssp EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEE--EEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEE--EEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence 457778877766533332211 1112344666 6766642 34433332 255665333 2222
Q ss_pred -heeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135 68 -QEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV 106 (106)
Q Consensus 68 -~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd 106 (106)
..+. .- .....++++| ++.++++-..++.|..+|
T Consensus 240 ~~~v~-~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d 275 (496)
T 3kya_A 240 IQLIA-AY----KQCNGATIHPINGELYFNSYEKGQVFRLD 275 (496)
T ss_dssp EEEEE-EE----SCCCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred ceeec-cC----CCceEEEEcCCCCeEEEEECCCCEEEEEe
Confidence 1222 11 3446778899 566677777788787664
No 336
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=23.73 E-value=1.3e+02 Score=18.09 Aligned_cols=65 Identities=9% Similarity=-0.084 Sum_probs=33.8
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc-ccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA-HRKKFDESILDVAFHPSKPFIASAGADGLAKV 104 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i 104 (106)
...+.+.+.+... .++-...+.|..++++... .+.+.. .. .....+++.. +..+.+-...+.|..
T Consensus 168 Pnglavd~~~~~l--Y~aD~~~~~I~~~d~dG~~-~~~~~~~~~----~~P~glav~~-~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 168 PNGLTLDYEEQKL--YWADAKLNFIHKSNLDGTN-RQAVVKGSL----PHPFALTLFE-DILYWTDWSTHSILA 233 (318)
T ss_dssp EEEEEEETTTTEE--EEEETTTTEEEEEETTSCS-CEEEECSCC----SCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred ccEEEEeccCCEE--EEEECCCCEEEEEcCCCCc-eEEEecCCC----CCceEEEEeC-CEEEEEecCCCeEEE
Confidence 3446666655553 4555667788888886432 222221 22 3445566543 344455444555543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=22.34 E-value=1.6e+02 Score=18.83 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=8.1
Q ss_pred eEEEEEcCCCCEEEEec
Q psy17135 81 ILDVAFHPSKPFIASAG 97 (106)
Q Consensus 81 v~~~~~~~~~~~~~s~~ 97 (106)
...++|.|+++++++-.
T Consensus 29 P~~~a~~pdG~l~V~e~ 45 (454)
T 1cru_A 29 PHALLWGPDNQIWLTER 45 (454)
T ss_dssp EEEEEECTTSCEEEEET
T ss_pred ceEEEEcCCCcEEEEEc
Confidence 34455555555444443
No 338
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=22.25 E-value=1.4e+02 Score=18.12 Aligned_cols=49 Identities=22% Similarity=0.380 Sum_probs=28.5
Q ss_pred CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheec--cccccCCCCeEEEEEcCC
Q psy17135 32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEIT--AHRKKFDESILDVAFHPS 89 (106)
Q Consensus 32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~--~~~~~~~~~v~~~~~~~~ 89 (106)
...+.+.|.+.. +++ ...+.|.+++ +++. +..+. ... ......++++|+
T Consensus 33 P~~ia~~pdG~l---~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g---~~~p~gia~~pd 85 (352)
T 2ism_A 33 PWALAFLPDGGM---LIA-ERPGRIRLFR--EGRLSTYAELSVYHRG---ESGLLGLALHPR 85 (352)
T ss_dssp EEEEEECTTSCE---EEE-ETTTEEEEEE--TTEEEEEEECCCCCST---TCSEEEEEECTT
T ss_pred ceEEEEcCCCeE---EEE-eCCCeEEEEE--CCCccEeecceEeecC---CCCceeEEECCC
Confidence 455777777653 344 4458898888 3331 11111 111 157889999997
No 339
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=21.73 E-value=59 Score=17.61 Aligned_cols=23 Identities=0% Similarity=-0.070 Sum_probs=18.5
Q ss_pred cCCCceEEEEeCccCceeeeccc
Q psy17135 3 KVPSSVIYIWTLLELQTYARNDC 25 (106)
Q Consensus 3 ~~~d~~i~iwd~~~~~~~~~~~~ 25 (106)
.+.+++|++.|-.+...+..++.
T Consensus 60 ~v~~~tlrLvD~~tk~~L~~~pI 82 (148)
T 3d8d_A 60 QLEDETLKLVEPQSQALLHAQPI 82 (148)
T ss_dssp EEETTEEEEECTTTCCEEEEEEG
T ss_pred EEcCCeEEEecCCCCceEEEeeE
Confidence 35788999999999888777766
Done!