RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17138
(212 letters)
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 94.6 bits (234), Expect = 8e-25
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 76 PYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALP 135
YI+GLTGGI SGK+TIA LG L++ D + + + E FG I
Sbjct: 2 TYIVGLTGGIGSGKTTIANLFTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILTE 61
Query: 136 DGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSAK 195
G ++R L VF++ ++ LN + P I ++K+++A ++ + +L+ K
Sbjct: 62 QGELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAE--QTAPYTLFVVPLLIENK 119
Query: 196 WQDQVHEIWVTFIPEQE 212
I V + Q
Sbjct: 120 LTALCDRILVVDVSPQT 136
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 90.3 bits (223), Expect = 4e-23
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 76 PYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALP 135
YI+ LTGGI SGKST+A LG +I+ D + + + G + + FG ++
Sbjct: 3 RYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIAA 62
Query: 136 DGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSAK 195
DG++ R+ L +F+N +E N LN + PLI + + +I + + ++ +L+
Sbjct: 63 DGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ--ATSPYVLWVVPLLVENS 120
Query: 196 WQDQVHEIWVTFIPEQE 212
+ + + V + +
Sbjct: 121 LYKKANRVLVVDVSPET 137
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 88.4 bits (218), Expect = 4e-22
Identities = 15/138 (10%), Positives = 31/138 (22%), Gaps = 8/138 (5%)
Query: 78 IIGLTGGIASGKSTIAKYL-ETLGAGLINC-DQLGHRAYDVGTRGNQVVRELFGE----- 130
+I L+G SGK T A ++ A +
Sbjct: 3 LIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKEFE 62
Query: 131 DIALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVI-EAA 189
I + ++ + LN + +E I +
Sbjct: 63 GIDYDRETNLNLTKLEVITIMEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKITDVI 122
Query: 190 VLLSAKWQDQVHEIWVTF 207
+ +W + +
Sbjct: 123 NNIEDQWSVRRLMQALGT 140
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 74.6 bits (182), Expect = 2e-17
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 75 YPYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIAL 134
+P IIG+TG I SGKST+A L + G +++ D L RA + N+ A+
Sbjct: 2 HPIIIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARE-----NKEEELKRLFPEAV 56
Query: 135 PDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSA 194
G +DR+ L +VFS+ + + L + P + + EE++RL ++ +E +L
Sbjct: 57 VGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRL--EAPLVFLEIPLLFEK 114
Query: 195 KWQDQVHEIWVTFIP 209
W+ ++H + P
Sbjct: 115 GWEGRLHGTLLVAAP 129
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 59.0 bits (141), Expect = 1e-11
Identities = 17/140 (12%), Positives = 34/140 (24%), Gaps = 2/140 (1%)
Query: 73 SPYPYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDI 132
+ ++G+ G SGK+T+A L + H + R +
Sbjct: 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFE 78
Query: 133 ALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLL 192
+ K + +I+IE L
Sbjct: 79 YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHET--DTHSKRTVYLSDSDMIMIEGVFLQ 136
Query: 193 SAKWQDQVHEIWVTFIPEQE 212
+W+ + P +
Sbjct: 137 RKEWRPFFDFVVYLDCPREI 156
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 44.2 bits (103), Expect = 2e-06
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQ 108
P++IG++GG ASGKS++ + + LG ++ Q
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQ 35
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 37.9 bits (87), Expect = 5e-04
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 76 PYIIGLTGGIASGKSTIAKYL 96
P I +G SGKS + +
Sbjct: 27 PLFIFFSGPQGSGKSFTSIQI 47
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 36.9 bits (84), Expect = 7e-04
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 76 PYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRG 120
P+ + + G I SGK+T + E + + + +V
Sbjct: 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVN 53
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 37.0 bits (85), Expect = 9e-04
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 76 PYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGT----RGNQVVRELFGED 131
PYII + G +A GKST A+ L+ L++ R + T NQV++E
Sbjct: 80 PYIISIAGSVAVGKSTTARVLQA----LLSRWPEHRRVELITTDGFLHPNQVLKERGLMK 135
Query: 132 IALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVL 191
S D +L V K + + ++ ++ V + + ++++E +
Sbjct: 136 KKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNV 195
Query: 192 LSAK--WQDQVHEIW 204
L + + H ++
Sbjct: 196 LQSGMDYPHDPHHVF 210
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 36.5 bits (84), Expect = 0.001
Identities = 13/115 (11%), Positives = 31/115 (26%), Gaps = 6/115 (5%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPD- 136
I L G GK+T A+ +G +
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLN 67
Query: 137 GSIDRKKLGAIVFSNK----DEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIE 187
G + + + + ++ I L+ + + E +K+++ +
Sbjct: 68 GDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSD 122
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 35.2 bits (80), Expect = 0.002
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 67 QPKPHLSPYPYIIGLTGGIASGKSTIAK-YLETLGAGLINCDQLGHRAY 114
+ LSP P ++ G +GKST + +L + G +N D LG
Sbjct: 5 ESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQR 53
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 35.3 bits (80), Expect = 0.003
Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPDG 137
I L G +GK T A+++ E G I+ + A G+ + +++ + D
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDE 62
Query: 138 SIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVI 184
+ L + +D N +P + Q V+
Sbjct: 63 LVI--ALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVL 107
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 35.0 bits (79), Expect = 0.003
Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 22/129 (17%)
Query: 76 PYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALP 135
+I L GG ++GKS I + L+ L G V L
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQ---------SVLPEPWLAFG------VDSLIEAMPLKM 47
Query: 136 DGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSAK 195
+ + A + + + W E + ++ + I+I+ L A
Sbjct: 48 QSAEGGIEFDADGGVSIGPEFRALEGAW-------AEGVVAMARAGARIIIDDVFLGGAA 100
Query: 196 WQDQVHEIW 204
Q++
Sbjct: 101 AQERWRSFV 109
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 34.5 bits (79), Expect = 0.006
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 78 IIGLTGGIASGKSTIAKYLETL 99
II +TG +G ST+ + +
Sbjct: 6 IISVTGSSGAGTSTVKHTFDQI 27
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 33.6 bits (77), Expect = 0.012
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 11/119 (9%)
Query: 78 IIGLTGGIASGKSTIAK---YLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIAL 134
+ G GKST+ + +G I D GH D T + L +D L
Sbjct: 46 TVAFVGMSGGGKSTLINLIPRFYDVTSGQILID--GHNIKDFLTGSLRNQIGLVQQDNIL 103
Query: 135 PDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLS 193
++ I+ ++ + + +A + I L + + V E V LS
Sbjct: 104 FSDTV----KENILLGRPTATDE--EVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLS 156
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 32.8 bits (73), Expect = 0.015
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVG 117
II G SGKST A+ G N ++ +R +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMA 43
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 32.6 bits (73), Expect = 0.021
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 76 PYIIGLTGGIASGKSTIA----KYLETLG--AGLINCDQLGHRAYD 115
P +I + G A GK+ I+ +YL +G N Q
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVK 47
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 32.2 bits (72), Expect = 0.022
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 2/102 (1%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLIN-CDQLGHRAYDVGTRGNQVVRELFGEDIALPD 136
I LTG GK+T+ K L G IN D G L + +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 66
Query: 137 GSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLS 178
+ R+ + + D + I ++ RL
Sbjct: 67 DNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLE 108
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 31.8 bits (71), Expect = 0.029
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTRGNQVVRELF 128
+ L G +GK T A L E A + + GT+ +++
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIM 55
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 32.0 bits (71), Expect = 0.033
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 75 YPYIIGLTGGIASGKSTIAKYL-ETLGAGLINCD 107
+ + + GG +SGKS + L
Sbjct: 6 FAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEY 39
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 31.9 bits (71), Expect = 0.037
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQL 109
P ++ + GG SGK T + G ++ L
Sbjct: 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDL 40
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 31.5 bits (70), Expect = 0.043
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYLET-LGAGLINCDQL 109
+I L G SGKS +A + L A ++ D L
Sbjct: 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFL 40
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 31.5 bits (70), Expect = 0.055
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGH----RAYDVGTRGNQVVRELFGE 130
P + + G IA GKST K L +T + + + +A +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 131 D 131
Sbjct: 62 M 62
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 31.8 bits (71), Expect = 0.055
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 175 ARLSESHKVIVIEA 188
A LSE +KV+V+E
Sbjct: 43 ATLSEKYKVLVLER 56
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 31.1 bits (69), Expect = 0.061
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQL 109
P ++ + GG +GK T + E G ++ +L
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGEL 35
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.8 bits (68), Expect = 0.075
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 78 IIGLTGGIASGKSTIAKYLE 97
+ +TG GKST K L
Sbjct: 4 LYIITGPAGVGKSTTCKRLA 23
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 30.8 bits (68), Expect = 0.083
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+I + G +GK T+ K +
Sbjct: 5 VITIDGPSGAGKGTLCKAM 23
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 30.7 bits (68), Expect = 0.083
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 78 IIGLTGGIASGKSTIAKYL-ETLGAGLINCD 107
I+ L+G SGKSTIA+ L G ++
Sbjct: 6 ILLLSGHPGSGKSTIAEALANLPGVPKVHFH 36
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.8 bits (68), Expect = 0.087
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYLET-LGAGLINCDQ 108
+ LTG +GK+T++ LE L I C
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYT 52
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.5 bits (67), Expect = 0.088
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 68 PKPHLSPYPYIIGLTGGIASGKSTIAKYLE 97
P+ + I LTG + SGK IA+ L+
Sbjct: 1 PRATQ---GFTIFLTGYMNSGKDAIARALQ 27
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 30.7 bits (68), Expect = 0.093
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 76 PYIIGLTGGIASGKSTIAKYL 96
I + G +SGKST+AK +
Sbjct: 3 TIQIAIDGPASSGKSTVAKII 23
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 30.7 bits (68), Expect = 0.093
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPD 136
+ L G +GK T A+ + G I+ + A GT ++ +PD
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPD 61
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 30.3 bits (67), Expect = 0.095
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQ 108
I G + SGKST+A+ L + L ++ D
Sbjct: 3 IVFIGFMGSGKSTLARALAKDLDLVFLDSDF 33
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.1 bits (66), Expect = 0.12
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Query: 77 YIIGLTGGIASGKSTIAKYLE 97
+++G G +GKSTI + L
Sbjct: 6 FLVGPMG---AGKSTIGRQLA 23
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 30.7 bits (69), Expect = 0.12
Identities = 8/29 (27%), Positives = 10/29 (34%), Gaps = 1/29 (3%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGL 103
I L G GKST + + G
Sbjct: 6 IVRIYLDGVYGIGKSTTGRVMASAASGGS 34
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 30.4 bits (68), Expect = 0.13
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 74 PYPYIIGLTGGIASGKSTIAKYL-ETLGAGLI 104
P + + G GK+T + L I
Sbjct: 2 PTLLRVYIDGPHGMGKTTTTQLLVALGSRDDI 33
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 29.6 bits (65), Expect = 0.17
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQ 108
P + L G SGKSTI + L + LG GL++ D
Sbjct: 2 PKAV-LVGLPGSGKSTIGRRLAKALGVGLLDTDV 34
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.6 bits (65), Expect = 0.18
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 23/130 (17%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPDG 137
++ +TG G +T ++ ++ G FG +
Sbjct: 3 VVVVTGVPGVGSTTSSQLA----------------MDNLRKEGVNYKMVSFGSVMF---- 42
Query: 138 SIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSAKWQ 197
+ S++D+M K++ I +IA +++ V V + + + K
Sbjct: 43 ---EVAKEENLVSDRDQMRKMDPETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGY 99
Query: 198 DQVHEIWVTF 207
WV
Sbjct: 100 LPGLPSWVLN 109
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 29.5 bits (65), Expect = 0.21
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQL 109
P + ++G ASGK T + + I+ L
Sbjct: 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISAGDL 37
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 29.2 bits (64), Expect = 0.23
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 79 IGLTGGIASGKSTIAKYL 96
I +TG +GK+++A+ +
Sbjct: 8 ILITGTPGTGKTSMAEMI 25
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 29.2 bits (64), Expect = 0.28
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 77 YIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQ 108
+++G G G +T+ + L LG ++ D
Sbjct: 6 FMVGARG---CGMTTVGRELARALGYEFVDTDI 35
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.9 bits (63), Expect = 0.36
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+I + G +GK T+ + L
Sbjct: 2 LIAIEGVDGAGKRTLVEKL 20
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 28.4 bits (62), Expect = 0.44
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 81 LTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTR 119
L G +GK T A L + + + G+
Sbjct: 8 LLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSE 47
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 28.4 bits (62), Expect = 0.46
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 76 PYIIGLTGGIASGKSTIAKYL-ETLGAGLINC-DQLGHRAYDVGTRGNQVVRELFGEDIA 133
II + GG SGK T + + + G ++ D L RG + + +
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLV 67
Query: 134 LPD 136
+
Sbjct: 68 PLE 70
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 28.3 bits (62), Expect = 0.47
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRA 113
+ G SGK T++ + + ++ L
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDN 44
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.4 bits (62), Expect = 0.48
Identities = 12/58 (20%), Positives = 21/58 (36%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALP 135
I + G IA+GKST L+ L + R +V + ++ +
Sbjct: 4 KISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGN 61
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 28.4 bits (62), Expect = 0.50
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 20/128 (15%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPDG 137
I +TG GKST+ + + +G +G D L
Sbjct: 3 IGIVTGIPGVGKSTVLAKV----------------KEILDNQGINNKIINYG-DFMLATA 45
Query: 138 SIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLSAKWQ 197
+++ Q + A+ E AR + + AV+ +
Sbjct: 46 LKLGYAKD---RDEMRKLSVEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGY 102
Query: 198 DQVHEIWV 205
+V
Sbjct: 103 LPGLPSYV 110
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.4 bits (62), Expect = 0.52
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 70 PHLSP-YPYIIGLTGGIASGKSTIAKYL-ETLGAGLINCDQL 109
P SP +I + GG +GK T + L + ++ L
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDL 42
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 28.3 bits (62), Expect = 0.54
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAY 114
+ L G +GK T A L E LG I+ +L R
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNI 39
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 27.9 bits (61), Expect = 0.65
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 79 IGLTGGIASGKSTIAKYL-ETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPD 136
I L G +GK T A + E G I+ + A GT + + +PD
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPD 61
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 28.0 bits (61), Expect = 0.70
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 78 IIGLTGGIASGKST----IAKYLETLG-AGLINCD 107
I+ G SGK+T +YLE +N D
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLD 36
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 27.9 bits (61), Expect = 0.74
Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 64 KPVQPKPHLSPYPYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQ 122
K + K H++ I G + +GKST+ + G+++ + + G +
Sbjct: 17 KDMYGKEHVN-----IVFIGHVDAGKSTLGGNI-LFLTGMVDKRTMEKIEREAKEAGKE 69
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.6 bits (60), Expect = 0.85
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 9/97 (9%)
Query: 79 IGLTGGIASGKSTIAKYLETLGAGLINCDQ-----LGHRAYDVGTRGNQVVRELFGEDIA 133
I +TG GK+T+ K + + R + R + G+
Sbjct: 3 IIITGEPGVGKTTLVKKI----VERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKI 58
Query: 134 LPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQV 170
KKL N +L I +
Sbjct: 59 FSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREA 95
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 27.6 bits (60), Expect = 0.86
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 78 IIGLTGGIASGKSTIAKYLE 97
++ +GK+T+ K L
Sbjct: 4 LLAFAAWSGTGKTTLLKKLI 23
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.5 bits (60), Expect = 0.86
Identities = 18/127 (14%), Positives = 37/127 (29%), Gaps = 10/127 (7%)
Query: 78 IIGLTGGIASGKST----IAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVR--ELFGED 131
+ + G SGK+T G + GH G VR
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVA 62
Query: 132 IALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVL 191
A+ + + L ++ D + L+L + + KV+++ +
Sbjct: 63 TAVEGDGLLQLHLRRPLWRLDDVLALYAPLRLDLVLVEGYK----QERHPKVVLVRSEED 118
Query: 192 LSAKWQD 198
++
Sbjct: 119 WASLQHL 125
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 27.5 bits (60), Expect = 0.95
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 69 KPHLSPYPYIIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQ 122
KPHL+ + + G + GKST+ L + G I+ + G +
Sbjct: 1 KPHLN-----LIVIGHVDHGKSTLVGRL-LMDRGFIDEKTVKEAEEAAKKLGKE 48
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 27.6 bits (61), Expect = 0.97
Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 15/127 (11%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQL-----GHRAYDVGTRGNQVVRELFGEDI 132
+ L G SGKST+A L L G R G++
Sbjct: 42 VTALVGPNGSGKSTVAALL----QNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEP 97
Query: 133 ALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLL 192
+ S+ I + + + + + + I+ L + + V EA L
Sbjct: 98 QVFGRSLQEN----IAYGLTQKP-TMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQL 152
Query: 193 SAKWQDQ 199
S Q Q
Sbjct: 153 SG-GQRQ 158
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 27.5 bits (60), Expect = 1.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 76 PYIIGLTGGIASGKSTIAKYLE 97
I LTG ASGKST+A LE
Sbjct: 24 GLTIWLTGLSASGKSTLAVELE 45
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 27.4 bits (60), Expect = 1.2
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 12/64 (18%)
Query: 65 PVQPKPHLSPYPYIIGLTGGIASGKST----IAKYLETLG--AGLINCDQLGHRAYDVGT 118
PV+PK ++ + G GK+T + +Y + LG D +
Sbjct: 1 PVEPKG------RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLS 54
Query: 119 RGNQ 122
+
Sbjct: 55 EWGK 58
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 27.5 bits (60), Expect = 1.4
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 76 PYIIGLTGGIASGKST----IAKYLETLG--AGLINCDQLGHRAYDVGTRGNQVVRELFG 129
+G+TG +GKST L G +I D + +L
Sbjct: 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLAR 113
Query: 130 EDIALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLIL 167
+ A LG ++ M A + +++
Sbjct: 114 AEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVI 151
>d1rzhh1 b.41.1.1 (H:36-248) Photosynthetic reaction centre
{Rhodobacter sphaeroides [TaxId: 1063]}
Length = 213
Score = 26.3 bits (58), Expect = 2.4
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 3 IVSAETQGGGVKVNELRVANSLKPLDVVSVPLLPSDGKVDEQEEDKLSS 51
+ + Q V VN L +P + S +V EEDK+
Sbjct: 158 MQMVKVQSNRVHVNALSSDL------FAGIPTIKSPTEVTLLEEDKICG 200
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 26.3 bits (57), Expect = 2.6
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 126 ELFGEDIALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIV 185
+ ++ + + I N E + L Q L ++K+ I S +I
Sbjct: 197 DWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQ--KNKYLPKIKKWIDENSPGDTLIP 254
Query: 186 IEAAV 190
+ A
Sbjct: 255 MSVAF 259
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 26.2 bits (57), Expect = 2.7
Identities = 17/146 (11%), Positives = 39/146 (26%), Gaps = 18/146 (12%)
Query: 76 PYIIGLTGGIASGKST----IAKYLETLGA--GLINCDQLGHRAYD--------VGTRGN 121
P++I + G GK+T +A+ E G L D A +
Sbjct: 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVI 68
Query: 122 QVVRELFGEDIALPDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESH 181
+ + + ++ ++ + + L ++ + +L
Sbjct: 69 AQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEE-LKKIVRVMKKLDVEA 127
Query: 182 KVIVIEAAVLLSAKWQDQVHEIWVTF 207
E + + A F
Sbjct: 128 P---HEVMLTIDASTGQNAVSQAKLF 150
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 26.4 bits (58), Expect = 2.8
Identities = 24/119 (20%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 78 IIGLTGGIASGKSTIAKY---LETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIAL 134
II G GKSTI AG I D + +Q+ +D A+
Sbjct: 30 IIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIG--FVSQDSAI 87
Query: 135 PDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLS 193
G+I + + L LA + + + + V E V +S
Sbjct: 88 MAGTI-----RENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKIS 141
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 26.2 bits (57), Expect = 3.0
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Query: 76 PYIIGLTGGIASGKST----IAKYLETLG--AGLINCDQLGHRAYD 115
P++I + G +GK+T +AK G L D A +
Sbjct: 11 PFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIE 56
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.1 bits (56), Expect = 3.1
Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 20/158 (12%)
Query: 42 DEQEEDKLSSSNLRMRELGTLRKPVQPKPHLSPYPYIIGLTGGIASGKSTIAKYL--ETL 99
D+Q E++L+ + + + + P L L G SGK+++ + ET
Sbjct: 8 DKQFENRLNDNLEELIQ--GKKAVESPTAFL--------LGGQPGSGKTSLRSAIFEETQ 57
Query: 100 GAGL-INCDQLGHRAYDVGTRGNQVVRELFGEDIALPDGSI-------DRKKLGAIVFSN 151
G + I+ D + + +++ + + ++
Sbjct: 58 GNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGT 117
Query: 152 KDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAA 189
+ Q L + ++ ++ +
Sbjct: 118 GRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTI 155
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide
kinase/adenosylcobinamide phosphate guanylyltransferase
CobU {Salmonella typhimurium [TaxId: 90371]}
Length = 180
Score = 25.8 bits (56), Expect = 3.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+I +TGG SGKS A+ L
Sbjct: 1 MILVTGGARSGKSRHAEAL 19
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 25.7 bits (55), Expect = 3.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+I L G +GKST ++ L
Sbjct: 5 LIVLEGVDRAGKSTQSRKL 23
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 25.9 bits (55), Expect = 4.1
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 61 TLRKPVQPKPHLSPYPYIIGLTGGIASGKSTIAKYL 96
+ LS I G G + GK+T+AK+
Sbjct: 31 IYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFT 66
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 25.4 bits (54), Expect = 4.3
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+ LTG GK+T+
Sbjct: 3 HVFLTGPPGVGKTTLIHKA 21
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 25.3 bits (54), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
++ L+G A GKST+ + L
Sbjct: 4 VVVLSGPSAVGKSTVVRCL 22
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 25.4 bits (55), Expect = 4.9
Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 4/52 (7%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFG 129
+ G +GK+ + + AG D +
Sbjct: 28 YFVILGPTGAGKTLFLELI----AGFHVPDSGRILLDGKDVTDLSPEKHDIA 75
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 25.3 bits (54), Expect = 5.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+I + G +GK+T L
Sbjct: 5 LILIEGLDRTGKTTQCNIL 23
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 25.3 bits (55), Expect = 5.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 78 IIGLTGGIASGKSTIAKYL 96
+IG+ G SGKST+ K +
Sbjct: 31 VIGIVGRSGSGKSTLTKLI 49
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 25.2 bits (54), Expect = 6.3
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 46 EDKLSSSNLRMRELGTLRKPVQPKPHLSPYPYIIGLTGGIASGKSTIAKYLETLGAGLIN 105
E + + +R+L P + +G+TG GKST ++ LG+ L
Sbjct: 27 ESRRADHRAAVRDLIDAVLPQTGRAI------RVGITGVPGVGKSTT---IDALGSLLTA 77
Query: 106 CD 107
Sbjct: 78 AG 79
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 25.3 bits (55), Expect = 6.5
Identities = 19/116 (16%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 78 IIGLTGGIASGKSTIAKYLETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIALPDG 137
++ +TG SGK+++ + G + + G + +V + + G
Sbjct: 64 MLAITGSTGSGKTSLLMLI----LGELEASE-GIIKHS-----GRVS--FCSQFSWIMPG 111
Query: 138 SIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSESHKVIVIEAAVLLS 193
+I I+F + + + Q++++I + +E ++ E V LS
Sbjct: 112 TIKE----NIIFGVSYDEYRYKSVVK---ACQLQQDITKFAEQDNTVLGEGGVTLS 160
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 24.9 bits (53), Expect = 7.1
Identities = 7/28 (25%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 69 KPHLSPYPYIIGLTGGIASGKSTIAKYL 96
+P ++ IG+ G + GK+T+ + +
Sbjct: 6 QPEVN-----IGVVGHVDHGKTTLVQAI 28
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 24.9 bits (54), Expect = 7.3
Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 3/105 (2%)
Query: 78 IIGLTGGIASGKSTIAKY---LETLGAGLINCDQLGHRAYDVGTRGNQVVRELFGEDIAL 134
+ + G SGKST+ G + + + + + F L
Sbjct: 32 VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPL 91
Query: 135 PDGSIDRKKLGAIVFSNKDEMNKLNQAIWPLILAQVKEEIARLSE 179
+ ++ L + + +N L W ++ E+ ++ E
Sbjct: 92 KEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILE 136
>d1q33a_ d.113.1.1 (A:) NUDT9 (mitochondrial ADP-ribose
pyrophosphatase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 292
Score = 25.0 bits (54), Expect = 7.4
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 172 EEIARLSESHKVIVIEAAVLLSAKWQDQV 200
+ +L SH + A A W +
Sbjct: 257 NDKLKLYASHSQFIKLVAEKRDAHWSEDS 285
>d2i5nh1 b.41.1.1 (H:37-258) Photosynthetic reaction centre
{Rhodopseudomonas viridis [TaxId: 1079]}
Length = 222
Score = 24.8 bits (54), Expect = 7.5
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 6 AETQGGGVKVNELRVANSLKPLDVVSVPLLPSDGKVDEQEEDKLSS 51
+ + + V + +VP L S ++ +EEDK+S+
Sbjct: 165 CDVKKDKIVVTSILSEQ------FANVPRLQSRDQITLREEDKVSA 204
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 24.9 bits (53), Expect = 8.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 79 IGLTGGIASGKSTIAKYL 96
I + G +GK+T +
Sbjct: 5 IVIEGLEGAGKTTARNVV 22
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 24.6 bits (53), Expect = 8.4
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 69 KPHLSPYPYIIGLTGGIASGKST----IAKYLETLGAGLINCDQLGHRAYDVGTRG 120
KPH++ +G G + GK+T I K L G + A + RG
Sbjct: 1 KPHVN-----VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARG 51
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus
furiosus [TaxId: 2261]}
Length = 225
Score = 24.6 bits (52), Expect = 8.7
Identities = 7/39 (17%), Positives = 20/39 (51%)
Query: 166 ILAQVKEEIARLSESHKVIVIEAAVLLSAKWQDQVHEIW 204
+ ++ ++ ++SE H+V V+ L+ K+ + +
Sbjct: 21 FIKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEKFN 59
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.135 0.383
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 772,194
Number of extensions: 34981
Number of successful extensions: 182
Number of sequences better than 10.0: 1
Number of HSP's gapped: 180
Number of HSP's successfully gapped: 95
Length of query: 212
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 131
Effective length of database: 1,295,466
Effective search space: 169706046
Effective search space used: 169706046
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (24.1 bits)