RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17141
         (141 letters)



>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 453

 Score = 25.6 bits (56), Expect = 2.5
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 36  DKDHIPEKILKKI-TNYVNLPDFDP 59
           D+ H+PE++L  +    + LP +DP
Sbjct: 424 DRKHVPEEVLAVLEQEPIILPAWDP 448


>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate
           uridylyltransferase {Escherichia coli [TaxId: 562]}
          Length = 176

 Score = 24.3 bits (52), Expect = 5.6
 Identities = 4/37 (10%), Positives = 14/37 (37%)

Query: 52  VNLPDFDPEEIGMVSVAAKSLSKWVMAIEKYAQLFKD 88
             LP+     +  +    +  +  +     + Q+F++
Sbjct: 116 KTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFEN 152


>d1kqfa2 c.81.1.1 (A:34-850) Formate dehydrogenase N, alpha subunit
           {Escherichia coli [TaxId: 562]}
          Length = 817

 Score = 24.4 bits (52), Expect = 7.2
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 32  LYEYDKDHIPEKILKKITNYVNLPDFDPEEI 62
           LY+ +     E ++K   NY    +   +E+
Sbjct: 630 LYQSEGGKGVEPLMKMSWNYKQPHEPQSDEV 660


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0576    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 578,241
Number of extensions: 27218
Number of successful extensions: 89
Number of sequences better than 10.0: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 18
Length of query: 141
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 64
Effective length of database: 1,350,386
Effective search space: 86424704
Effective search space used: 86424704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 48 (22.6 bits)