Query psy17147
Match_columns 291
No_of_seqs 154 out of 1697
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 23:08:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17147.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17147hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02606 palmitoyl-protein thi 100.0 1.2E-34 2.5E-39 233.2 15.9 258 3-291 25-294 (306)
2 KOG2541|consensus 100.0 3.1E-34 6.6E-39 222.8 16.4 259 3-290 22-290 (296)
3 PF02089 Palm_thioest: Palmito 100.0 1E-34 2.2E-39 232.1 13.3 260 2-291 3-279 (279)
4 PLN02633 palmitoyl protein thi 100.0 2.2E-34 4.7E-39 231.6 15.1 259 3-290 24-294 (314)
5 PLN02824 hydrolase, alpha/beta 100.0 2.2E-29 4.7E-34 211.4 8.1 101 4-108 29-138 (294)
6 KOG4178|consensus 100.0 8.5E-29 1.8E-33 200.0 10.1 104 2-108 42-149 (322)
7 PLN02965 Probable pheophorbida 100.0 7.3E-29 1.6E-33 203.9 9.2 102 1-106 1-106 (255)
8 TIGR02240 PHA_depoly_arom poly 100.0 1.1E-28 2.4E-33 205.2 10.3 101 4-108 25-127 (276)
9 PRK03592 haloalkane dehalogena 99.9 4.6E-28 1E-32 203.4 9.6 100 3-106 26-127 (295)
10 PRK00870 haloalkane dehalogena 99.9 1.2E-27 2.7E-32 201.5 11.4 101 3-106 45-149 (302)
11 PRK10673 acyl-CoA esterase; Pr 99.9 2.4E-27 5.2E-32 194.8 11.8 99 3-105 15-114 (255)
12 PRK03204 haloalkane dehalogena 99.9 4.1E-27 8.8E-32 196.5 12.7 100 3-106 33-135 (286)
13 PLN02679 hydrolase, alpha/beta 99.9 2.7E-27 5.9E-32 203.5 11.4 101 3-107 87-191 (360)
14 PRK11126 2-succinyl-6-hydroxy- 99.9 1.1E-27 2.4E-32 195.4 8.0 100 3-106 1-101 (242)
15 PRK10349 carboxylesterase BioH 99.9 1.5E-27 3.1E-32 196.4 8.4 94 5-106 14-108 (256)
16 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.6E-27 7.7E-32 196.7 7.9 102 3-107 29-136 (282)
17 TIGR03056 bchO_mg_che_rel puta 99.9 2E-26 4.4E-31 191.5 12.4 101 3-107 27-130 (278)
18 TIGR01738 bioH putative pimelo 99.9 7.3E-27 1.6E-31 189.9 6.6 96 4-106 4-99 (245)
19 PLN03084 alpha/beta hydrolase 99.9 3.3E-26 7.1E-31 196.3 9.8 100 4-107 127-232 (383)
20 PLN03087 BODYGUARD 1 domain co 99.9 3.5E-26 7.7E-31 199.9 10.1 103 4-107 201-309 (481)
21 KOG1454|consensus 99.9 3.9E-26 8.4E-31 191.8 9.6 105 3-109 57-168 (326)
22 TIGR03611 RutD pyrimidine util 99.9 3.7E-26 8.1E-31 187.4 8.6 100 3-106 12-114 (257)
23 KOG4409|consensus 99.9 4.4E-26 9.5E-31 184.9 8.6 102 3-108 89-196 (365)
24 PLN02578 hydrolase 99.9 7.1E-26 1.5E-30 194.5 8.5 101 3-107 85-187 (354)
25 PLN02385 hydrolase; alpha/beta 99.9 2E-25 4.3E-30 191.6 10.3 101 4-107 87-197 (349)
26 PLN02211 methyl indole-3-aceta 99.9 4.5E-25 9.8E-30 182.6 11.7 101 3-106 17-121 (273)
27 PRK06489 hypothetical protein; 99.9 9.1E-26 2E-30 194.3 6.9 102 4-106 69-188 (360)
28 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.2E-25 2.5E-30 183.4 6.2 101 3-107 12-114 (251)
29 TIGR03695 menH_SHCHC 2-succiny 99.9 1E-24 2.2E-29 177.5 10.1 99 4-106 1-104 (251)
30 PHA02857 monoglyceride lipase; 99.9 1.3E-24 2.8E-29 180.8 10.8 98 7-107 28-132 (276)
31 PRK10749 lysophospholipase L2; 99.9 3.6E-24 7.8E-29 182.3 12.5 101 4-107 54-166 (330)
32 PF12697 Abhydrolase_6: Alpha/ 99.9 1.1E-25 2.4E-30 180.7 2.2 98 7-108 1-102 (228)
33 PLN02894 hydrolase, alpha/beta 99.9 1.3E-23 2.8E-28 182.7 13.7 101 3-107 104-211 (402)
34 TIGR01250 pro_imino_pep_2 prol 99.9 3.9E-24 8.5E-29 178.1 9.1 101 4-107 25-131 (288)
35 PLN02298 hydrolase, alpha/beta 99.9 3.6E-24 7.8E-29 182.6 7.5 100 5-107 60-169 (330)
36 PRK08775 homoserine O-acetyltr 99.9 1.1E-24 2.4E-29 186.4 4.2 100 4-107 57-173 (343)
37 PRK14875 acetoin dehydrogenase 99.9 1.5E-23 3.2E-28 181.7 9.6 101 4-108 131-233 (371)
38 PLN02511 hydrolase 99.9 3.9E-23 8.5E-28 179.0 9.6 104 3-108 99-211 (388)
39 TIGR01392 homoserO_Ac_trn homo 99.9 3.4E-24 7.4E-29 184.0 2.3 101 4-107 31-162 (351)
40 PRK00175 metX homoserine O-ace 99.9 1.9E-23 4.2E-28 180.8 4.5 101 4-107 48-182 (379)
41 PRK07581 hypothetical protein; 99.9 5.5E-23 1.2E-27 175.9 6.0 100 5-107 42-159 (339)
42 KOG2382|consensus 99.9 5.7E-23 1.2E-27 166.5 5.4 102 3-106 51-159 (315)
43 PLN02652 hydrolase; alpha/beta 99.9 3.1E-22 6.6E-27 172.9 8.6 99 5-106 137-244 (395)
44 PLN02980 2-oxoglutarate decarb 99.9 2.5E-22 5.4E-27 199.3 8.7 100 3-106 1370-1479(1655)
45 COG2267 PldB Lysophospholipase 99.9 6.9E-22 1.5E-26 164.5 10.0 100 5-107 35-142 (298)
46 COG1647 Esterase/lipase [Gener 99.9 8E-22 1.7E-26 150.0 8.9 101 4-110 15-121 (243)
47 PRK10985 putative hydrolase; P 99.8 2.6E-21 5.6E-26 164.3 9.4 104 4-109 58-170 (324)
48 PRK05855 short chain dehydroge 99.8 5.2E-21 1.1E-25 175.3 9.0 100 3-106 24-130 (582)
49 TIGR01249 pro_imino_pep_1 prol 99.8 8.3E-21 1.8E-25 160.1 8.3 101 3-107 26-130 (306)
50 KOG1455|consensus 99.8 6E-21 1.3E-25 152.4 6.1 99 6-107 56-164 (313)
51 PRK11071 esterase YqiA; Provis 99.8 7.6E-20 1.7E-24 142.9 11.3 89 5-107 2-93 (190)
52 TIGR01607 PST-A Plasmodium sub 99.8 2.5E-20 5.4E-25 158.4 8.8 101 5-107 22-185 (332)
53 PRK05077 frsA fermentation/res 99.8 4.1E-19 8.9E-24 154.7 11.7 101 5-108 195-301 (414)
54 PRK10566 esterase; Provisional 99.8 1.9E-18 4E-23 141.6 8.7 95 4-102 27-136 (249)
55 TIGR03100 hydr1_PEP hydrolase, 99.7 6.1E-18 1.3E-22 140.2 10.1 101 4-108 26-135 (274)
56 TIGR01838 PHA_synth_I poly(R)- 99.7 5.6E-18 1.2E-22 149.9 10.3 105 3-110 187-305 (532)
57 PRK06765 homoserine O-acetyltr 99.7 1.3E-18 2.8E-23 149.8 5.8 102 4-108 56-197 (389)
58 PRK13604 luxD acyl transferase 99.7 6.7E-17 1.4E-21 132.7 15.1 99 4-107 37-141 (307)
59 TIGR01836 PHA_synth_III_C poly 99.7 6.8E-18 1.5E-22 144.9 8.6 103 4-109 62-173 (350)
60 PF12695 Abhydrolase_5: Alpha/ 99.7 1.2E-16 2.6E-21 119.7 14.2 92 6-105 1-93 (145)
61 KOG2564|consensus 99.7 2.3E-17 5E-22 129.8 10.3 101 3-104 73-179 (343)
62 TIGR03101 hydr2_PEP hydrolase, 99.7 9.5E-17 2.1E-21 130.9 12.2 103 4-109 25-136 (266)
63 COG0429 Predicted hydrolase of 99.7 2.3E-17 5E-22 133.7 7.8 104 4-109 75-187 (345)
64 COG0596 MhpC Predicted hydrola 99.7 2.1E-16 4.6E-21 129.1 13.4 102 5-108 22-124 (282)
65 KOG2984|consensus 99.7 7.6E-18 1.6E-22 126.3 3.1 223 4-291 42-274 (277)
66 COG3208 GrsT Predicted thioest 99.7 3.3E-17 7.2E-22 127.7 6.2 220 3-290 6-233 (244)
67 PF00561 Abhydrolase_1: alpha/ 99.7 3.3E-19 7.2E-24 143.8 -5.7 72 34-106 1-78 (230)
68 KOG1838|consensus 99.7 2.9E-15 6.2E-20 126.0 14.1 105 3-109 124-237 (409)
69 PLN02872 triacylglycerol lipas 99.6 1.2E-16 2.5E-21 137.8 4.0 101 4-107 74-197 (395)
70 PRK11460 putative hydrolase; P 99.6 8.8E-15 1.9E-19 118.1 13.8 100 3-103 15-134 (232)
71 TIGR03230 lipo_lipase lipoprot 99.6 6.4E-15 1.4E-19 127.1 12.6 105 3-108 40-155 (442)
72 PLN00021 chlorophyllase 99.6 8.9E-14 1.9E-18 116.5 17.2 100 4-105 52-164 (313)
73 PRK07868 acyl-CoA synthetase; 99.6 2.2E-15 4.8E-20 145.3 7.9 102 3-109 66-179 (994)
74 KOG4667|consensus 99.6 3.5E-14 7.6E-19 107.9 12.6 101 3-107 32-139 (269)
75 TIGR02821 fghA_ester_D S-formy 99.5 1.9E-13 4.2E-18 113.4 15.0 101 4-106 42-172 (275)
76 cd00707 Pancreat_lipase_like P 99.5 6E-14 1.3E-18 115.9 11.8 105 3-109 35-149 (275)
77 PLN02442 S-formylglutathione h 99.5 3.9E-13 8.5E-18 111.9 15.3 101 4-107 47-178 (283)
78 PF07819 PGAP1: PGAP1-like pro 99.5 2.4E-13 5.2E-18 108.7 12.7 109 3-111 3-127 (225)
79 KOG1552|consensus 99.5 4.1E-13 8.8E-18 105.7 12.1 101 4-108 60-164 (258)
80 PF00326 Peptidase_S9: Prolyl 99.5 6.1E-14 1.3E-18 112.1 7.5 85 20-107 3-99 (213)
81 KOG4391|consensus 99.5 3.1E-14 6.7E-19 108.3 2.8 101 3-105 77-182 (300)
82 PF06342 DUF1057: Alpha/beta h 99.5 1.5E-13 3.3E-18 109.5 6.8 101 6-111 37-141 (297)
83 PF06821 Ser_hydrolase: Serine 99.4 8E-13 1.7E-17 100.9 10.4 88 7-107 1-91 (171)
84 COG1506 DAP2 Dipeptidyl aminop 99.4 6.2E-13 1.3E-17 122.0 8.4 98 4-106 394-506 (620)
85 TIGR01840 esterase_phb esteras 99.4 3.8E-12 8.3E-17 101.6 11.4 101 4-107 13-130 (212)
86 TIGR01839 PHA_synth_II poly(R) 99.4 3.4E-12 7.4E-17 112.5 11.5 105 4-110 215-331 (560)
87 PF06028 DUF915: Alpha/beta hy 99.4 4.8E-12 1E-16 102.3 9.4 109 3-111 10-147 (255)
88 PF02230 Abhydrolase_2: Phosph 99.4 8.3E-12 1.8E-16 99.9 10.8 102 3-106 13-139 (216)
89 COG2021 MET2 Homoserine acetyl 99.3 1E-12 2.2E-17 108.7 4.6 103 4-109 51-184 (368)
90 TIGR03502 lipase_Pla1_cef extr 99.3 1.4E-11 3.1E-16 113.0 11.6 85 5-91 450-575 (792)
91 PF01674 Lipase_2: Lipase (cla 99.3 1.1E-11 2.5E-16 97.7 8.6 86 5-92 2-96 (219)
92 PF00975 Thioesterase: Thioest 99.3 3.4E-11 7.5E-16 97.2 9.7 102 5-109 1-106 (229)
93 PF05057 DUF676: Putative seri 99.2 8.6E-11 1.9E-15 93.8 10.6 111 4-114 4-132 (217)
94 PRK10162 acetyl esterase; Prov 99.2 3.1E-10 6.7E-15 96.1 14.5 101 4-106 81-194 (318)
95 PF05728 UPF0227: Uncharacteri 99.2 3.1E-10 6.7E-15 87.7 13.2 87 7-107 2-91 (187)
96 COG2945 Predicted hydrolase of 99.2 1.2E-10 2.7E-15 87.4 10.1 97 5-105 29-135 (210)
97 PLN02733 phosphatidylcholine-s 99.2 1.1E-10 2.5E-15 101.6 9.9 95 15-112 105-206 (440)
98 PF06500 DUF1100: Alpha/beta h 99.2 6.1E-11 1.3E-15 100.8 7.6 102 5-109 191-298 (411)
99 COG0400 Predicted esterase [Ge 99.2 3.3E-10 7.2E-15 88.6 10.6 99 3-105 17-132 (207)
100 PF08538 DUF1749: Protein of u 99.1 3.3E-10 7.2E-15 92.5 10.0 102 4-109 33-150 (303)
101 PF01738 DLH: Dienelactone hyd 99.1 2.1E-09 4.5E-14 86.2 14.6 96 4-103 14-128 (218)
102 PF12146 Hydrolase_4: Putative 99.1 1.3E-10 2.7E-15 76.7 5.5 62 4-67 16-79 (79)
103 TIGR00976 /NonD putative hydro 99.1 3.8E-10 8.3E-15 102.6 9.8 102 4-108 22-133 (550)
104 KOG2931|consensus 99.1 3E-10 6.5E-15 90.8 7.2 100 4-107 46-157 (326)
105 TIGR01849 PHB_depoly_PhaZ poly 99.1 2.1E-10 4.6E-15 98.4 6.3 104 5-112 103-213 (406)
106 COG3545 Predicted esterase of 99.1 1.9E-09 4.1E-14 80.1 10.3 93 4-108 2-95 (181)
107 PRK10115 protease 2; Provision 99.0 2.3E-09 4.9E-14 99.5 10.6 101 4-107 445-559 (686)
108 COG3319 Thioesterase domains o 99.0 2.4E-09 5.1E-14 86.5 9.2 100 5-108 1-104 (257)
109 COG1075 LipA Predicted acetylt 99.0 1.3E-09 2.8E-14 92.6 7.9 107 4-114 59-171 (336)
110 PRK10252 entF enterobactin syn 99.0 1.7E-09 3.6E-14 108.3 9.7 97 4-105 1068-1169(1296)
111 COG3243 PhaC Poly(3-hydroxyalk 99.0 2.2E-09 4.7E-14 90.4 8.3 106 4-111 107-221 (445)
112 PF10230 DUF2305: Uncharacteri 99.0 1.4E-08 2.9E-13 83.6 12.9 102 5-106 3-121 (266)
113 COG4814 Uncharacterized protei 98.9 2.4E-08 5.3E-13 78.4 12.5 105 4-108 45-177 (288)
114 PF03096 Ndr: Ndr family; Int 98.9 2.5E-10 5.4E-15 92.3 1.3 101 4-108 23-135 (283)
115 COG0412 Dienelactone hydrolase 98.9 4.9E-08 1.1E-12 78.8 14.5 95 5-103 28-142 (236)
116 PF05990 DUF900: Alpha/beta hy 98.9 2.4E-08 5.2E-13 80.4 11.6 103 3-106 17-136 (233)
117 PF09752 DUF2048: Uncharacteri 98.9 8.3E-08 1.8E-12 79.9 14.2 98 4-105 92-208 (348)
118 PF00151 Lipase: Lipase; Inte 98.9 9.3E-09 2E-13 86.8 8.7 107 3-109 70-189 (331)
119 PF05448 AXE1: Acetyl xylan es 98.9 1E-08 2.2E-13 86.3 8.8 96 4-105 83-207 (320)
120 PF12740 Chlorophyllase2: Chlo 98.9 3.8E-08 8.2E-13 79.1 11.3 101 4-106 17-130 (259)
121 PF06057 VirJ: Bacterial virul 98.9 1.1E-07 2.3E-12 72.5 12.9 102 5-108 3-108 (192)
122 PF07859 Abhydrolase_3: alpha/ 98.9 1.4E-08 3E-13 80.9 8.6 97 7-106 1-109 (211)
123 COG3571 Predicted hydrolase of 98.8 1.6E-07 3.4E-12 68.7 12.8 101 5-108 15-125 (213)
124 PF07224 Chlorophyllase: Chlor 98.8 2.9E-08 6.2E-13 78.5 9.4 102 4-107 46-157 (307)
125 PF03959 FSH1: Serine hydrolas 98.8 3.3E-08 7.2E-13 78.7 8.5 91 1-91 1-122 (212)
126 COG4757 Predicted alpha/beta h 98.7 1.7E-08 3.7E-13 78.2 5.7 94 7-105 33-136 (281)
127 PF10503 Esterase_phd: Esteras 98.7 2.6E-07 5.7E-12 73.2 11.2 104 4-109 16-134 (220)
128 KOG3724|consensus 98.7 1.6E-07 3.4E-12 84.7 10.3 106 3-112 88-225 (973)
129 KOG2565|consensus 98.7 4.7E-08 1E-12 80.9 6.6 98 4-102 152-259 (469)
130 COG4188 Predicted dienelactone 98.6 1.9E-07 4E-12 78.1 8.9 89 4-94 71-182 (365)
131 KOG4627|consensus 98.6 1.3E-07 2.8E-12 72.0 7.2 99 4-107 67-172 (270)
132 KOG2100|consensus 98.6 3.7E-07 8.1E-12 85.4 11.7 98 4-106 526-643 (755)
133 PF08840 BAAT_C: BAAT / Acyl-C 98.6 3.5E-07 7.7E-12 72.8 9.8 36 71-108 22-57 (213)
134 KOG2624|consensus 98.6 9.8E-08 2.1E-12 82.0 6.0 103 3-107 72-199 (403)
135 COG3458 Acetyl esterase (deace 98.6 3.9E-08 8.4E-13 78.1 2.7 95 4-103 83-206 (321)
136 PF11339 DUF3141: Protein of u 98.5 1.6E-06 3.5E-11 75.2 11.5 102 3-109 67-177 (581)
137 PF03403 PAF-AH_p_II: Platelet 98.5 1E-06 2.3E-11 76.0 10.3 101 4-108 100-263 (379)
138 PRK05371 x-prolyl-dipeptidyl a 98.5 6E-07 1.3E-11 84.2 8.9 82 22-106 270-372 (767)
139 KOG2112|consensus 98.5 6.5E-07 1.4E-11 68.7 7.3 97 4-103 3-124 (206)
140 COG0657 Aes Esterase/lipase [L 98.5 2.3E-06 5.1E-11 72.5 11.6 101 4-107 79-191 (312)
141 PRK04940 hypothetical protein; 98.5 1.9E-06 4.1E-11 65.5 9.6 88 7-107 2-92 (180)
142 smart00824 PKS_TE Thioesterase 98.4 2.1E-06 4.6E-11 67.9 9.7 94 9-107 2-102 (212)
143 PF02273 Acyl_transf_2: Acyl t 98.4 3.7E-06 7.9E-11 66.1 10.3 96 4-104 30-131 (294)
144 PF02450 LCAT: Lecithin:choles 98.4 2E-06 4.3E-11 74.8 9.9 89 19-112 66-165 (389)
145 PF02129 Peptidase_S15: X-Pro 98.4 3.5E-06 7.6E-11 69.9 10.6 102 4-109 20-138 (272)
146 COG4782 Uncharacterized protei 98.4 4.5E-06 9.8E-11 69.5 10.7 90 2-91 114-211 (377)
147 KOG2551|consensus 98.3 6.5E-06 1.4E-10 63.9 9.8 55 204-290 162-217 (230)
148 COG3509 LpqC Poly(3-hydroxybut 98.3 6.4E-06 1.4E-10 66.7 9.6 102 4-107 61-179 (312)
149 KOG3847|consensus 98.2 2.4E-06 5.1E-11 69.4 5.0 100 4-107 118-275 (399)
150 PF00756 Esterase: Putative es 98.2 1.6E-05 3.4E-10 65.1 9.4 103 3-106 23-149 (251)
151 KOG1515|consensus 98.2 7E-05 1.5E-09 63.3 13.2 104 4-110 90-210 (336)
152 PF05677 DUF818: Chlamydia CHL 98.1 1.6E-05 3.6E-10 65.8 9.2 90 3-93 136-237 (365)
153 PF12715 Abhydrolase_7: Abhydr 98.1 9.5E-06 2.1E-10 68.6 8.0 96 4-105 115-258 (390)
154 COG3150 Predicted esterase [Ge 98.1 2.9E-06 6.3E-11 62.6 4.1 77 7-93 2-81 (191)
155 PF03583 LIP: Secretory lipase 98.1 1E-05 2.2E-10 67.5 7.9 83 23-107 18-113 (290)
156 COG4099 Predicted peptidase [G 98.1 9.1E-06 2E-10 65.7 6.7 101 5-107 192-304 (387)
157 PTZ00472 serine carboxypeptida 98.1 5.5E-06 1.2E-10 73.6 5.7 104 3-106 76-215 (462)
158 KOG2369|consensus 98.0 9.1E-06 2E-10 69.9 5.9 92 18-111 124-229 (473)
159 PF05577 Peptidase_S28: Serine 98.0 0.00015 3.1E-09 64.5 12.6 105 4-110 28-151 (434)
160 KOG1553|consensus 98.0 2E-05 4.2E-10 65.1 6.0 95 5-105 244-343 (517)
161 KOG2281|consensus 97.9 6.1E-05 1.3E-09 67.1 9.1 101 4-108 642-762 (867)
162 PLN02517 phosphatidylcholine-s 97.9 2.7E-05 5.8E-10 69.3 6.8 92 18-111 156-267 (642)
163 PF12048 DUF3530: Protein of u 97.9 0.00037 8.1E-09 58.7 13.1 101 6-108 89-230 (310)
164 PF11144 DUF2920: Protein of u 97.9 0.00016 3.4E-09 61.8 10.7 48 57-105 165-217 (403)
165 KOG3043|consensus 97.9 4.4E-05 9.4E-10 59.4 6.6 95 5-103 40-150 (242)
166 PRK10439 enterobactin/ferric e 97.8 0.00027 5.8E-09 62.0 11.6 102 4-106 209-322 (411)
167 KOG3975|consensus 97.8 0.00037 8.1E-09 55.2 10.5 100 4-103 29-143 (301)
168 cd00741 Lipase Lipase. Lipase 97.8 0.0001 2.2E-09 55.5 7.0 53 57-109 13-69 (153)
169 PF04301 DUF452: Protein of un 97.8 6.8E-05 1.5E-09 58.9 5.9 78 4-107 11-91 (213)
170 KOG3253|consensus 97.7 0.00018 4E-09 63.7 8.5 107 3-109 175-288 (784)
171 PF05705 DUF829: Eukaryotic pr 97.6 0.00015 3.2E-09 59.0 5.9 102 6-111 1-116 (240)
172 PF01764 Lipase_3: Lipase (cla 97.6 0.00014 3E-09 53.8 5.2 56 54-109 46-107 (140)
173 KOG2183|consensus 97.5 0.00064 1.4E-08 57.8 8.9 102 4-107 80-202 (492)
174 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0028 6E-08 48.5 11.6 54 56-110 92-147 (177)
175 COG0627 Predicted esterase [Ge 97.4 0.00047 1E-08 57.9 7.1 102 5-108 55-188 (316)
176 cd00312 Esterase_lipase Estera 97.4 0.00063 1.4E-08 61.5 8.5 101 4-107 95-213 (493)
177 PF11187 DUF2974: Protein of u 97.4 0.00049 1.1E-08 55.0 6.7 54 55-108 68-124 (224)
178 KOG3967|consensus 97.4 0.002 4.3E-08 49.9 9.6 101 4-106 101-226 (297)
179 cd00519 Lipase_3 Lipase (class 97.4 0.00062 1.3E-08 54.9 6.6 53 56-109 112-169 (229)
180 PF10340 DUF2424: Protein of u 97.3 0.0022 4.8E-08 54.7 10.1 105 4-108 122-236 (374)
181 KOG4840|consensus 97.3 0.00044 9.6E-09 53.8 4.4 100 5-108 37-145 (299)
182 KOG4372|consensus 97.3 0.00034 7.5E-09 59.4 4.2 87 5-91 81-170 (405)
183 PF01083 Cutinase: Cutinase; 97.2 0.0041 8.8E-08 48.0 9.5 103 7-109 8-124 (179)
184 KOG3101|consensus 97.1 0.00065 1.4E-08 52.5 4.0 101 4-106 44-175 (283)
185 PLN00413 triacylglycerol lipas 97.1 0.0019 4E-08 56.5 7.0 55 56-110 268-330 (479)
186 PLN02162 triacylglycerol lipas 97.0 0.0025 5.4E-08 55.6 7.3 56 56-111 262-325 (475)
187 PLN02454 triacylglycerol lipas 97.0 0.0023 5E-08 55.3 6.7 54 56-110 210-273 (414)
188 PF07082 DUF1350: Protein of u 96.9 0.013 2.8E-07 47.0 10.0 97 5-105 15-123 (250)
189 PF00135 COesterase: Carboxyle 96.9 0.0057 1.2E-07 55.8 9.2 100 5-107 126-245 (535)
190 PLN02408 phospholipase A1 96.8 0.0042 9.2E-08 52.9 6.8 54 56-109 182-242 (365)
191 COG2819 Predicted hydrolase of 96.8 0.0028 6.2E-08 51.2 5.3 51 55-106 117-171 (264)
192 KOG1202|consensus 96.8 0.0063 1.4E-07 58.5 8.0 93 2-106 2121-2219(2376)
193 PLN02571 triacylglycerol lipas 96.7 0.0036 7.8E-08 54.2 5.8 36 56-91 208-246 (413)
194 KOG2029|consensus 96.7 0.0066 1.4E-07 54.1 7.3 87 26-114 471-579 (697)
195 PF11288 DUF3089: Protein of u 96.6 0.0043 9.3E-08 48.6 5.1 59 34-92 46-116 (207)
196 PLN02310 triacylglycerol lipas 96.5 0.0086 1.9E-07 51.7 6.7 54 56-110 189-251 (405)
197 KOG2182|consensus 96.5 0.023 5E-07 49.8 9.1 106 3-110 85-210 (514)
198 PLN02934 triacylglycerol lipas 96.5 0.0062 1.3E-07 53.8 5.7 55 56-110 305-367 (515)
199 PLN02324 triacylglycerol lipas 96.4 0.0085 1.8E-07 51.8 6.2 54 56-110 197-267 (415)
200 PLN02802 triacylglycerol lipas 96.3 0.0067 1.5E-07 53.6 5.1 55 56-110 312-373 (509)
201 COG3946 VirJ Type IV secretory 96.3 0.035 7.5E-07 47.5 8.8 85 8-94 264-349 (456)
202 COG2382 Fes Enterochelin ester 96.1 0.028 6.1E-07 46.3 7.5 101 4-105 98-210 (299)
203 PF10142 PhoPQ_related: PhoPQ- 96.1 0.019 4.2E-07 49.3 6.9 53 195-276 253-306 (367)
204 KOG2237|consensus 96.1 0.014 3E-07 52.7 6.1 83 18-103 486-580 (712)
205 PLN02719 triacylglycerol lipas 96.1 0.015 3.3E-07 51.5 6.1 56 56-111 277-348 (518)
206 PLN03037 lipase class 3 family 96.1 0.022 4.8E-07 50.5 6.9 56 56-111 298-362 (525)
207 PF08237 PE-PPE: PE-PPE domain 96.0 0.053 1.2E-06 43.4 8.6 77 32-108 1-90 (225)
208 KOG1551|consensus 96.0 0.006 1.3E-07 49.0 3.0 70 33-103 141-226 (371)
209 PLN02753 triacylglycerol lipas 96.0 0.015 3.1E-07 51.7 5.4 56 55-110 290-361 (531)
210 PF05277 DUF726: Protein of un 95.9 0.026 5.6E-07 48.0 6.5 40 70-109 218-262 (345)
211 PLN02761 lipase class 3 family 95.9 0.017 3.7E-07 51.2 5.5 55 56-110 272-344 (527)
212 COG2936 Predicted acyl esteras 95.8 0.02 4.3E-07 51.6 5.7 80 26-109 75-161 (563)
213 COG4947 Uncharacterized protei 95.3 0.091 2E-06 39.5 6.8 100 3-107 25-136 (227)
214 PF00450 Peptidase_S10: Serine 95.2 0.16 3.5E-06 44.7 9.4 105 3-107 39-181 (415)
215 PLN02847 triacylglycerol lipas 94.7 0.052 1.1E-06 49.0 4.9 32 60-91 239-271 (633)
216 PLN03016 sinapoylglucose-malat 94.6 0.24 5.3E-06 43.9 8.8 104 3-106 65-209 (433)
217 COG2272 PnbA Carboxylesterase 94.4 0.2 4.3E-06 44.3 7.6 101 4-107 94-217 (491)
218 PF08386 Abhydrolase_4: TAP-li 94.4 0.014 3E-07 40.6 0.4 57 205-290 34-91 (103)
219 KOG4569|consensus 94.2 0.1 2.2E-06 44.7 5.5 54 56-109 155-214 (336)
220 PF04083 Abhydro_lipase: Parti 94.2 0.03 6.6E-07 34.9 1.7 18 3-20 42-59 (63)
221 PLN02209 serine carboxypeptida 94.2 0.11 2.4E-06 46.1 5.7 103 4-106 68-211 (437)
222 COG1505 Serine proteases of th 93.9 0.067 1.5E-06 48.1 3.8 95 9-107 424-534 (648)
223 PLN02213 sinapoylglucose-malat 93.8 0.26 5.7E-06 41.9 7.2 72 35-106 3-95 (319)
224 COG1073 Hydrolases of the alph 93.7 0.12 2.5E-06 42.9 4.8 104 4-109 49-171 (299)
225 COG2830 Uncharacterized protei 93.5 0.16 3.5E-06 37.8 4.4 76 6-105 13-88 (214)
226 COG1770 PtrB Protease II [Amin 93.3 0.62 1.3E-05 42.7 8.7 96 7-105 451-560 (682)
227 KOG2385|consensus 91.5 0.41 8.8E-06 42.5 5.2 41 68-109 443-489 (633)
228 KOG4540|consensus 90.7 0.6 1.3E-05 38.3 5.1 47 57-107 261-308 (425)
229 COG5153 CVT17 Putative lipase 90.7 0.6 1.3E-05 38.3 5.1 47 57-107 261-308 (425)
230 COG2939 Carboxypeptidase C (ca 90.5 0.92 2E-05 40.3 6.5 104 4-107 101-236 (498)
231 KOG1516|consensus 89.2 0.65 1.4E-05 42.7 4.9 101 4-107 112-232 (545)
232 TIGR03712 acc_sec_asp2 accesso 88.0 2.5 5.5E-05 37.6 7.3 84 4-93 288-379 (511)
233 KOG1282|consensus 87.3 3 6.6E-05 37.2 7.5 104 4-107 73-213 (454)
234 PF05576 Peptidase_S37: PS-10 86.1 0.41 8.9E-06 41.5 1.5 100 3-108 62-170 (448)
235 PF09949 DUF2183: Uncharacteri 84.7 7.7 0.00017 26.7 7.0 81 19-102 12-97 (100)
236 COG4553 DepA Poly-beta-hydroxy 83.3 11 0.00024 31.4 8.4 106 4-113 103-215 (415)
237 KOG1283|consensus 80.8 3.1 6.8E-05 34.9 4.5 84 5-92 32-143 (414)
238 PF07519 Tannase: Tannase and 80.5 3 6.5E-05 37.6 4.8 51 56-107 96-150 (474)
239 COG0529 CysC Adenylylsulfate k 79.8 23 0.00049 27.4 8.4 37 3-41 21-59 (197)
240 PTZ00472 serine carboxypeptida 78.7 0.54 1.2E-05 42.2 -0.5 31 261-291 427-457 (462)
241 KOG2521|consensus 78.7 9.5 0.00021 32.8 6.9 104 4-109 38-154 (350)
242 KOG4388|consensus 76.8 8.3 0.00018 35.3 6.2 97 7-110 399-511 (880)
243 PF10081 Abhydrolase_9: Alpha/ 76.5 31 0.00068 28.7 8.9 56 53-109 87-149 (289)
244 PRK12467 peptide synthase; Pro 73.2 9.5 0.0002 44.0 7.0 81 5-91 3693-3777(3956)
245 PF00450 Peptidase_S10: Serine 72.4 0.72 1.6E-05 40.6 -1.4 32 260-291 383-414 (415)
246 PF00326 Peptidase_S9: Prolyl 72.2 16 0.00034 28.7 6.5 44 3-48 143-191 (213)
247 PF00698 Acyl_transf_1: Acyl t 71.3 4.2 9.1E-05 34.5 3.1 30 61-90 73-103 (318)
248 COG1506 DAP2 Dipeptidyl aminop 71.2 17 0.00037 34.2 7.3 42 4-47 551-595 (620)
249 COG1448 TyrB Aspartate/tyrosin 69.0 37 0.0008 29.5 8.0 83 5-105 172-263 (396)
250 smart00827 PKS_AT Acyl transfe 67.2 7.1 0.00015 32.6 3.6 28 63-90 73-101 (298)
251 PF09994 DUF2235: Uncharacteri 66.5 12 0.00025 31.2 4.7 37 57-93 76-114 (277)
252 cd01714 ETF_beta The electron 65.8 55 0.0012 25.7 8.1 63 35-103 79-145 (202)
253 TIGR03131 malonate_mdcH malona 65.7 8.3 0.00018 32.3 3.7 28 63-90 67-95 (295)
254 PLN02209 serine carboxypeptida 63.5 4.1 8.8E-05 36.4 1.5 29 261-290 404-432 (437)
255 COG3933 Transcriptional antite 62.5 38 0.00083 30.0 7.0 70 6-87 111-181 (470)
256 TIGR01361 DAHP_synth_Bsub phos 62.3 46 0.00099 27.4 7.3 73 2-81 130-206 (260)
257 PLN03016 sinapoylglucose-malat 61.6 5.9 0.00013 35.3 2.1 30 261-291 400-429 (433)
258 PRK13397 3-deoxy-7-phosphohept 60.1 36 0.00078 27.8 6.2 39 2-43 120-159 (250)
259 PF06792 UPF0261: Uncharacteri 59.5 1.3E+02 0.0027 26.7 10.4 95 6-103 3-126 (403)
260 PF08386 Abhydrolase_4: TAP-li 59.3 55 0.0012 22.4 6.5 44 4-48 34-77 (103)
261 COG4287 PqaA PhoPQ-activated p 55.7 20 0.00042 31.0 4.1 45 204-276 328-373 (507)
262 TIGR00521 coaBC_dfp phosphopan 55.4 69 0.0015 28.2 7.6 86 5-92 113-225 (390)
263 PF02230 Abhydrolase_2: Phosph 55.2 35 0.00076 26.9 5.5 56 4-63 155-213 (216)
264 COG1856 Uncharacterized homolo 54.2 53 0.0011 26.3 5.9 73 25-103 104-186 (275)
265 TIGR03586 PseI pseudaminic aci 53.1 84 0.0018 26.9 7.5 82 2-91 132-214 (327)
266 TIGR03569 NeuB_NnaB N-acetylne 52.1 64 0.0014 27.7 6.7 83 2-92 131-216 (329)
267 cd07225 Pat_PNPLA6_PNPLA7 Pata 52.0 22 0.00048 30.1 4.0 27 66-92 37-64 (306)
268 cd07212 Pat_PNPLA9 Patatin-lik 51.6 24 0.00051 30.0 4.1 19 74-92 35-53 (312)
269 PRK10279 hypothetical protein; 50.9 22 0.00047 30.0 3.7 27 66-92 27-54 (300)
270 PRK13398 3-deoxy-7-phosphohept 50.6 1.4E+02 0.0031 24.6 9.2 73 3-81 133-208 (266)
271 PF09825 BPL_N: Biotin-protein 50.6 1.3E+02 0.0029 26.2 8.4 79 6-89 2-99 (367)
272 TIGR00128 fabD malonyl CoA-acy 50.5 20 0.00043 29.8 3.5 21 71-91 83-103 (290)
273 PLN02213 sinapoylglucose-malat 50.4 5 0.00011 34.1 -0.1 29 261-290 286-314 (319)
274 PRK11460 putative hydrolase; P 50.3 86 0.0019 25.1 7.0 43 3-47 147-194 (232)
275 PRK05579 bifunctional phosphop 49.6 83 0.0018 27.8 7.2 73 4-78 116-196 (399)
276 cd07198 Patatin Patatin-like p 49.1 28 0.00061 26.4 3.9 32 62-94 17-49 (172)
277 PF00091 Tubulin: Tubulin/FtsZ 48.5 77 0.0017 25.1 6.4 50 54-103 106-164 (216)
278 cd07207 Pat_ExoU_VipD_like Exo 47.4 30 0.00065 26.7 3.9 33 60-93 16-49 (194)
279 KOG1282|consensus 47.3 6.7 0.00015 35.0 0.2 31 261-291 416-446 (454)
280 PRK14457 ribosomal RNA large s 46.9 1.4E+02 0.003 25.9 8.0 73 7-86 260-334 (345)
281 COG3673 Uncharacterized conser 46.8 47 0.001 28.2 4.9 87 4-91 30-142 (423)
282 TIGR02816 pfaB_fam PfaB family 46.2 25 0.00054 32.3 3.6 32 62-93 254-287 (538)
283 cd07210 Pat_hypo_W_succinogene 44.0 39 0.00085 27.0 4.1 26 68-93 24-50 (221)
284 COG0541 Ffh Signal recognition 43.8 2.4E+02 0.0052 25.3 10.1 99 3-103 98-247 (451)
285 PF06309 Torsin: Torsin; Inte 43.7 1.2E+02 0.0027 21.9 8.3 24 4-27 52-77 (127)
286 cd07227 Pat_Fungal_NTE1 Fungal 43.3 35 0.00076 28.3 3.8 27 66-92 32-59 (269)
287 PRK10416 signal recognition pa 43.1 2.1E+02 0.0046 24.4 8.8 82 19-103 185-267 (318)
288 PF14253 AbiH: Bacteriophage a 42.1 23 0.00049 29.1 2.6 14 71-84 235-248 (270)
289 PF12242 Eno-Rase_NADH_b: NAD( 40.1 59 0.0013 21.1 3.6 42 52-93 20-62 (78)
290 PF03681 UPF0150: Uncharacteri 39.4 47 0.001 19.0 2.9 14 32-45 12-25 (48)
291 PRK05282 (alpha)-aspartyl dipe 39.3 2.1E+02 0.0045 23.2 8.2 38 3-42 30-70 (233)
292 PRK12595 bifunctional 3-deoxy- 39.2 1.1E+02 0.0023 26.7 6.2 73 2-81 223-299 (360)
293 cd07209 Pat_hypo_Ecoli_Z1214_l 39.1 47 0.001 26.3 3.9 31 62-93 17-48 (215)
294 PF02089 Palm_thioest: Palmito 38.1 38 0.00082 28.2 3.1 62 96-157 194-260 (279)
295 PRK06849 hypothetical protein; 37.0 1E+02 0.0022 27.0 6.0 74 1-79 1-85 (389)
296 PF06850 PHB_depo_C: PHB de-po 36.9 19 0.00041 28.1 1.2 50 205-279 133-185 (202)
297 COG1752 RssA Predicted esteras 36.7 49 0.0011 27.9 3.8 28 66-93 33-61 (306)
298 COG0331 FabD (acyl-carrier-pro 36.5 45 0.00098 28.3 3.5 27 64-90 76-104 (310)
299 cd07211 Pat_PNPLA8 Patatin-lik 36.2 46 0.001 28.1 3.6 17 74-90 44-60 (308)
300 PTZ00445 p36-lilke protein; Pr 36.1 66 0.0014 25.6 4.1 22 18-41 29-50 (219)
301 PRK09461 ansA cytoplasmic aspa 35.9 1.1E+02 0.0024 26.3 5.8 24 54-77 93-116 (335)
302 PF03283 PAE: Pectinacetyleste 35.4 71 0.0015 27.8 4.6 32 60-91 142-176 (361)
303 PF03808 Glyco_tran_WecB: Glyc 35.3 2E+02 0.0043 21.9 8.8 68 5-85 49-116 (172)
304 COG0218 Predicted GTPase [Gene 35.3 1E+02 0.0022 24.3 4.9 16 36-51 72-87 (200)
305 PLN02633 palmitoyl protein thi 35.3 34 0.00073 28.9 2.5 61 97-157 211-276 (314)
306 cd07205 Pat_PNPLA6_PNPLA7_NTE1 34.7 92 0.002 23.6 4.8 22 71-92 28-49 (175)
307 cd07228 Pat_NTE_like_bacteria 34.4 71 0.0015 24.3 4.1 33 61-94 18-51 (175)
308 COG1576 Uncharacterized conser 33.6 2.1E+02 0.0045 21.5 6.6 45 32-83 66-110 (155)
309 PRK07313 phosphopantothenoylcy 33.0 1.3E+02 0.0028 23.2 5.3 61 3-66 112-178 (182)
310 COG4822 CbiK Cobalamin biosynt 32.8 2.6E+02 0.0056 22.4 7.0 13 18-30 118-130 (265)
311 cd05312 NAD_bind_1_malic_enz N 32.2 95 0.0021 25.9 4.6 84 7-92 27-127 (279)
312 cd07208 Pat_hypo_Ecoli_yjju_li 31.9 98 0.0021 25.4 4.8 23 72-94 28-50 (266)
313 PRK10115 protease 2; Provision 30.6 2.7E+02 0.0059 26.7 8.0 66 4-70 606-677 (686)
314 PLN02606 palmitoyl-protein thi 30.4 42 0.00091 28.3 2.3 66 97-163 210-280 (306)
315 COG2876 AroA 3-deoxy-D-arabino 29.8 1.2E+02 0.0025 25.1 4.6 74 3-82 151-227 (286)
316 PF03796 DnaB_C: DnaB-like hel 28.1 3.3E+02 0.0071 22.1 7.9 73 6-78 103-178 (259)
317 PRK14454 ribosomal RNA large s 27.8 4E+02 0.0087 23.0 7.9 74 8-86 257-330 (342)
318 TIGR00696 wecB_tagA_cpsF bacte 27.3 2.9E+02 0.0063 21.2 7.4 64 5-82 49-112 (177)
319 cd07230 Pat_TGL4-5_like Triacy 26.9 69 0.0015 28.6 3.2 34 60-94 90-124 (421)
320 PRK06731 flhF flagellar biosyn 26.9 3.7E+02 0.008 22.3 9.8 76 20-103 142-219 (270)
321 PF07745 Glyco_hydro_53: Glyco 26.9 2.6E+02 0.0057 24.1 6.5 71 4-80 168-239 (332)
322 PF00148 Oxidored_nitro: Nitro 26.9 1.2E+02 0.0026 26.6 4.7 63 18-81 91-156 (398)
323 PF08902 DUF1848: Domain of un 26.7 1.8E+02 0.004 24.1 5.3 55 14-70 55-110 (266)
324 PF07521 RMMBL: RNA-metabolisi 26.6 55 0.0012 18.3 1.7 9 4-12 32-40 (43)
325 PRK08506 replicative DNA helic 26.5 4.9E+02 0.011 23.6 9.2 62 16-77 285-349 (472)
326 PRK02842 light-independent pro 26.1 4E+02 0.0087 23.8 7.9 76 4-82 97-178 (427)
327 TIGR03707 PPK2_P_aer polyphosp 26.0 1.7E+02 0.0038 23.6 5.0 68 4-83 30-101 (230)
328 PRK04148 hypothetical protein; 26.0 1.3E+02 0.0028 22.0 3.9 36 56-91 2-38 (134)
329 KOG2963|consensus 25.9 1.1E+02 0.0023 26.3 3.9 32 4-35 134-166 (405)
330 TIGR01249 pro_imino_pep_1 prol 25.8 3.5E+02 0.0075 22.5 7.2 56 4-63 248-303 (306)
331 smart00870 Asparaginase Aspara 25.7 2.2E+02 0.0048 24.3 5.9 11 18-28 60-70 (323)
332 PF02590 SPOUT_MTase: Predicte 25.6 1.3E+02 0.0028 22.6 4.0 25 57-81 84-109 (155)
333 COG0400 Predicted esterase [Ge 25.5 3.4E+02 0.0074 21.5 7.1 42 3-46 145-190 (207)
334 KOG1252|consensus 25.4 3.7E+02 0.008 23.3 6.9 37 4-41 211-247 (362)
335 PF12000 Glyco_trans_4_3: Gkyc 25.4 2.7E+02 0.0058 21.4 5.7 61 33-95 20-89 (171)
336 cd07217 Pat17_PNPLA8_PNPLA9_li 25.0 68 0.0015 27.7 2.7 18 74-91 44-61 (344)
337 PF07519 Tannase: Tannase and 25.0 50 0.0011 29.9 2.0 51 207-277 354-409 (474)
338 TIGR03709 PPK2_rel_1 polyphosp 25.0 91 0.002 25.8 3.3 66 4-81 55-124 (264)
339 PF01583 APS_kinase: Adenylyls 24.9 3E+02 0.0066 20.7 7.0 35 5-41 2-38 (156)
340 PLN02752 [acyl-carrier protein 24.7 58 0.0013 28.0 2.3 18 73-90 126-143 (343)
341 cd07224 Pat_like Patatin-like 24.7 1.2E+02 0.0026 24.4 4.0 22 72-93 30-51 (233)
342 PRK05595 replicative DNA helic 24.6 4.9E+02 0.011 23.4 8.2 69 7-76 286-357 (444)
343 cd06583 PGRP Peptidoglycan rec 24.3 1.6E+02 0.0035 20.5 4.3 32 51-82 84-117 (126)
344 PHA02114 hypothetical protein 24.1 1.1E+02 0.0024 20.8 3.0 33 6-40 84-116 (127)
345 PRK05636 replicative DNA helic 24.0 5.7E+02 0.012 23.5 8.8 61 16-77 359-422 (505)
346 PF01734 Patatin: Patatin-like 23.9 74 0.0016 23.9 2.6 22 71-92 27-48 (204)
347 PRK03204 haloalkane dehalogena 23.7 2.5E+02 0.0055 23.1 5.9 45 4-48 227-271 (286)
348 PRK14194 bifunctional 5,10-met 23.6 1.1E+02 0.0024 25.8 3.6 33 59-91 143-182 (301)
349 PF13728 TraF: F plasmid trans 23.5 2.2E+02 0.0048 22.7 5.2 40 7-47 125-164 (215)
350 PRK11613 folP dihydropteroate 23.5 3.8E+02 0.0083 22.5 6.7 74 4-85 133-225 (282)
351 PF03976 PPK2: Polyphosphate k 23.5 83 0.0018 25.4 2.8 65 5-82 31-100 (228)
352 PF08484 Methyltransf_14: C-me 23.4 1.7E+02 0.0038 22.0 4.4 58 52-110 47-107 (160)
353 cd01972 Nitrogenase_VnfE_like 23.4 2.6E+02 0.0056 25.0 6.1 74 4-81 89-172 (426)
354 PRK13982 bifunctional SbtC-lik 23.2 2.3E+02 0.0051 25.8 5.8 37 3-41 179-218 (475)
355 PHA02857 monoglyceride lipase; 23.1 4.1E+02 0.0088 21.5 7.1 64 4-68 209-272 (276)
356 COG1598 Predicted nuclease of 22.7 2.1E+02 0.0047 18.1 4.5 26 33-58 15-43 (73)
357 COG0031 CysK Cysteine synthase 22.7 4.1E+02 0.0088 22.6 6.7 83 8-94 172-282 (300)
358 COG3340 PepE Peptidase E [Amin 22.6 1.8E+02 0.0039 23.2 4.3 36 4-41 32-70 (224)
359 PF12692 Methyltransf_17: S-ad 22.6 68 0.0015 23.9 1.9 65 15-84 38-105 (160)
360 cd07229 Pat_TGL3_like Triacylg 22.5 97 0.0021 27.3 3.2 34 60-94 100-134 (391)
361 PTZ00062 glutaredoxin; Provisi 22.4 2.6E+02 0.0056 22.1 5.3 39 4-42 18-57 (204)
362 PRK02399 hypothetical protein; 22.2 5.6E+02 0.012 22.8 11.7 93 8-103 6-128 (406)
363 KOG1465|consensus 22.0 2.7E+02 0.0058 23.6 5.3 33 6-41 164-196 (353)
364 PF01118 Semialdhyde_dh: Semia 21.9 1.7E+02 0.0037 20.5 4.0 33 72-106 1-34 (121)
365 cd01981 Pchlide_reductase_B Pc 21.9 3.5E+02 0.0077 24.1 6.8 43 4-47 85-130 (430)
366 PF03205 MobB: Molybdopterin g 21.9 1.8E+02 0.0039 21.2 4.1 40 6-47 1-42 (140)
367 KOG1200|consensus 21.8 3.7E+02 0.0081 21.4 5.8 27 14-42 21-47 (256)
368 cd07213 Pat17_PNPLA8_PNPLA9_li 21.7 83 0.0018 26.3 2.6 19 74-92 37-55 (288)
369 COG1282 PntB NAD/NADP transhyd 21.6 5.2E+02 0.011 22.7 7.1 38 3-42 307-348 (463)
370 cd07232 Pat_PLPL Patain-like p 21.4 1.3E+02 0.0029 26.6 3.9 36 59-94 83-118 (407)
371 PF08496 Peptidase_S49_N: Pept 21.4 2.4E+02 0.0051 21.3 4.6 46 34-84 98-145 (155)
372 PLN02949 transferase, transfer 21.3 2.9E+02 0.0063 25.0 6.1 20 71-90 116-135 (463)
373 PLN02298 hydrolase, alpha/beta 21.2 3.2E+02 0.007 23.0 6.2 63 4-68 251-316 (330)
374 cd06533 Glyco_transf_WecG_TagA 21.0 3.8E+02 0.0082 20.3 8.6 68 4-84 46-113 (171)
375 PF04084 ORC2: Origin recognit 21.0 5.4E+02 0.012 22.1 9.7 97 8-106 57-178 (326)
376 TIGR02153 gatD_arch glutamyl-t 20.9 2.9E+02 0.0062 24.6 5.8 16 52-67 122-137 (404)
377 TIGR03600 phage_DnaB phage rep 20.8 6E+02 0.013 22.5 9.1 63 16-78 288-352 (421)
378 PRK15453 phosphoribulokinase; 20.7 5.2E+02 0.011 21.8 7.2 65 1-67 1-88 (290)
379 cd07231 Pat_SDP1-like Sugar-De 20.7 1.5E+02 0.0033 25.3 3.9 33 59-92 84-117 (323)
380 PRK09004 FMN-binding protein M 20.6 3.5E+02 0.0077 19.8 5.9 7 71-77 83-89 (146)
381 cd01819 Patatin_and_cPLA2 Pata 20.5 2.1E+02 0.0046 21.2 4.4 29 61-89 16-46 (155)
382 COG2312 Erythromycin esterase 20.4 4E+02 0.0087 23.6 6.3 37 4-41 44-84 (405)
383 PF06107 DUF951: Bacterial pro 20.3 81 0.0018 19.1 1.6 50 236-290 6-56 (57)
384 PLN02385 hydrolase; alpha/beta 20.2 3.5E+02 0.0077 23.0 6.3 64 4-69 279-345 (349)
No 1
>PLN02606 palmitoyl-protein thioesterase
Probab=100.00 E-value=1.2e-34 Score=233.17 Aligned_cols=258 Identities=27% Similarity=0.414 Sum_probs=207.0
Q ss_pred CCCeEEEEcCCC--CChhHHHHHHHHHHHhCCCcEEEEecCCCCC--CCc-chHHHHHHHHHHHHHHHHhcCCCceEEEE
Q psy17147 3 RYRPVLVIHGIL--SGNKTLEKFKERIERFHPGTKVVIPDNYSNW--ASL-EPMWNQVLFFGSLVMKMSQNHPEGIHLIG 77 (291)
Q Consensus 3 ~~~~vvllHG~~--~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g--~S~-~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 77 (291)
+..|||++||++ .++..+..+.+.+.+. +|..+..+. .|.+ .|. .+....++.+++.|.. ...+..-+++||
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~-~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~-~~~L~~G~naIG 101 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINH-SGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQ-MKELSEGYNIVA 101 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhC-CCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhc-chhhcCceEEEE
Confidence 467999999999 5557888888888632 244333333 2223 354 6778889999999988 777777899999
Q ss_pred eChHHHHHHHHHHhCCC-CCcceEEEecCCCCCccC-c-c--ccccccccchhhhcccchhhhhcccccccccccCceeE
Q psy17147 78 YSQGGLIARGILEQFPN-HNVRNFISLSSPHGGQYG-S-N--QFGHFTEDESVVELRDTKMYTENSLGLRTLDKQGKLVL 152 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~-~~v~~li~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
+|.||.+++.+++++|+ .+|..+|.+++|+.|... + + +++++.. ..+....++.+.+
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p~~C~~~~C~~~-~~l~~~~Ys~~vQ----------------- 163 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPKGCNSTFCELL-KAVFAVIYTDFAQ----------------- 163 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCcccchhhHhHHH-HHHHHhhhHHHHh-----------------
Confidence 99999999999999998 779999999999999877 3 1 1222211 1111122222222
Q ss_pred eecCCCccccccCCCccccccccchhccCccchhhhccCCCCCchhhhcccccccceEEEeeCCCceeccCccCcccccC
Q psy17147 153 ISVPGVDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFT 232 (291)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~ 232 (291)
..+.+++||+|| ...+.|+..+.||+.+|+.+....+..|++++.++..+|++.+++|+++.|++++||++|+
T Consensus 164 ---~~lv~AqYwrDP----~~~~~Yl~~s~FLadINNEr~~~~n~tYk~n~~~L~~~Vlv~f~~DtvV~PkeSswFg~y~ 236 (306)
T PLN02606 164 ---DHTAPSGYVKKP----MEIKNYLEHSKYLPKLNNERPGERNPTFKDRFTSLHNLVLVMFQGDTVLIPRETSWFGYYP 236 (306)
T ss_pred ---ccEeccccccCc----chHHHHHHhCcchhhhcCcCcccccHHHHHHHHHhhceEEEEeCCCceECCCccccceecC
Confidence 225667899999 8899999999999999999865567899999999999999999999999999999999999
Q ss_pred CCc--eEEecccccccccccchhhhhhhcCCEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 233 EDE--SVVELRDTKMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 233 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
+++ +++||++++.|+++++|+++|.+++++.+..+|| .|+-+ ..+.|.+.|.+||.
T Consensus 237 ~~~~~~vipl~e~~lY~eD~iGLktLd~~Gkl~f~~v~G-~Hl~~--~~~~~~~~i~pyL~ 294 (306)
T PLN02606 237 DGASTPLLSPQSTKLYTEDWIGLKTLDDAGKVKFISVPG-GHIEI--AEEDLVKYVVPYLQ 294 (306)
T ss_pred CCCCceeecchhccchhhcchhHHHHHHCCCeEEEecCC-chhee--cHHHHHHHHHHHhc
Confidence 976 7999999999999999999999999999999999 99988 34688888888763
No 2
>KOG2541|consensus
Probab=100.00 E-value=3.1e-34 Score=222.82 Aligned_cols=259 Identities=35% Similarity=0.553 Sum_probs=219.4
Q ss_pred CCCeEEEEcCCCCChhH--HHHHHHHHHHhCCCcEEEEecCCCC-CCC-cchHHHHHHHHHHHHHHHHhcCCCceEEEEe
Q psy17147 3 RYRPVLVIHGILSGNKT--LEKFKERIERFHPGTKVVIPDNYSN-WAS-LEPMWNQVLFFGSLVMKMSQNHPEGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~--~~~~~~~L~~~~~g~~v~~~D~~G~-g~S-~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 78 (291)
+..|+|++||++.+..+ +..+.+.+.+ .+|..|+++|.-.. ..| ..+....++..++.|. ..+++..-++++|.
T Consensus 22 s~~P~ii~HGigd~c~~~~~~~~~q~l~~-~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~-~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMANLTQLLEE-LPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVK-QMPELSQGYNIVGY 99 (296)
T ss_pred ccCCEEEEeccCcccccchHHHHHHHHHh-CCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHh-cchhccCceEEEEE
Confidence 34799999999999876 8899999999 68999999998532 244 5777888889999988 47788889999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCCCCCccCcccc----ccccccchhhhcccchhhhhcccccccccccCceeEee
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQF----GHFTEDESVVELRDTKMYTENSLGLRTLDKQGKLVLIS 154 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (291)
|.||++++.+++..++.+|..+|.+++|+.|..+.... ++.+....+....++++.++.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~c~~~l~c~~~~~~l~~~~Ys~~vQ~h----------------- 162 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPRCLKWLFCDLMRSNLKLGIYSDFVQDH----------------- 162 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCCCCchhhhHHHHHhhcccccchHHHhc-----------------
Confidence 99999999999999998899999999999998873312 222222334444555555442
Q ss_pred cCCCccccccCCCccccccccchhccCccchhhhccCCCCCchhhhcccccccceEEEeeCCCceeccCccCcccccCCC
Q psy17147 155 VPGVDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTED 234 (291)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~ 234 (291)
++++.||++| ...+.|+..+.|++.+|+.+...+++.|++++.++..+|+|.+++|+++.|+++.|||+|+++
T Consensus 163 ---~a~sgY~~~P----~~~d~Yl~~s~fLp~iNnEr~~~nntt~k~~f~~L~nLVlV~f~~D~vi~P~~SSwFGfY~dg 235 (296)
T KOG2541|consen 163 ---LAPSGYWHDP----HQIDLYLEHSKFLPKINNERPHENNTTYKDNFLSLGNLVLVGFENDTVITPKQSSWFGFYPDG 235 (296)
T ss_pred ---ccccccccCc----hHHHHHHhhchhhhhhcCCCCCccccHHHHHhhhhccEEEEecCCCCEeccCcccceeeecCC
Confidence 4445699999 899999999999999999998888999999999999999999999999999999999999997
Q ss_pred c--eEEecccccccccccchhhhhhhcCCEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 235 E--SVVELRDTKMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 235 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
+ +++|+.+++.|.++++|++.+.+...++++.++| +|..+.+. .+.+.+..+|
T Consensus 236 ~~~~vLp~qet~LYteD~iGLKtL~~aGkv~fv~v~G-~Hl~~~~~--d~~~~vvpyl 290 (296)
T KOG2541|consen 236 EFTTVLPMQETKLYTEDWIGLKTLDEAGKVKFVSVPG-DHLQIWHE--DFVKYVVPYL 290 (296)
T ss_pred CcccccChhhcccccccccchHHHHhCCCEEEeccCC-ceeeeehh--hhhhhhcchh
Confidence 7 4999999999999999999999999999999999 88877764 5777776665
No 3
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=100.00 E-value=1e-34 Score=232.10 Aligned_cols=260 Identities=31% Similarity=0.512 Sum_probs=182.6
Q ss_pred CCCCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCC------cchHHHHHHHHHHHHHHHHhcCCCc
Q psy17147 2 KRYRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWAS------LEPMWNQVLFFGSLVMKMSQNHPEG 72 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S------~~~~~~~~~~~~~~i~~~~~~~~~~ 72 (291)
+++.|||+.||++.+. ..+..+.+.+++.+||..|+.++.-....+ .......++.+++.+.. ..++..-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~-~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLAN-DPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH--GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhh-Chhhhcc
Confidence 4678999999999864 478999999999899999999998533221 12234445555555544 4445578
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCccCcc------ccccccccchhhhcccchhhhhcccccccccc
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSN------QFGHFTEDESVVELRDTKMYTENSLGLRTLDK 146 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (291)
+++||+|.||.+++.+++++++.+|..+|.+++|..|..+.. +++++...+.+....+..+.+.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~c~~~~~~~c~~~~~~l~~~~Y~~~~Q~---------- 151 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPFCPGDSDWFCKLMRKLLKSGAYSDWVQK---------- 151 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TCHCSTCHHHHHHHHHHHHHHHTSHHHHC----------
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCccccccchHHHHHHHHHhhccchhhhhc----------
Confidence 999999999999999999999878999999999999987622 1233333233333333433332
Q ss_pred cCceeEeecCCCccccccCCCccccccccchhccCccchhhhccCCCCCchhhhcccccccceEEEeeCCCceeccCccC
Q psy17147 147 QGKLVLISVPGVDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSS 226 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~ 226 (291)
.+.+++||+|| ...+.|+..+.|++.+|+... .+..|++++.++..+|++.+.+|.++.|++++
T Consensus 152 ----------~~v~AqYwrDP----~~~~~Yl~~s~FLadiNNE~~--~n~tyk~nl~~L~~~Vlv~f~~D~~v~P~eSs 215 (279)
T PF02089_consen 152 ----------HLVQAQYWRDP----HHEDKYLEYSIFLADINNERP--VNETYKENLLKLEKFVLVGFPDDTVVVPKESS 215 (279)
T ss_dssp ----------CTCHGGGB--S----TTHHHHHHH-SSHHHHTTSSS---HHHHHHHHCTSSEEEEEEETT-SSSSSGGGG
T ss_pred ----------eEeehhhccCC----CcHHHHHHccchhhhhcCCcc--cchHHHHHHHHhhheeEEecCCCcEEecCccc
Confidence 25667899999 888999999999999999863 46889999999999999999999999999999
Q ss_pred cccccCC--CceEEecccccccccccchhhhhhhcCCEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 227 QFGHFTE--DESVVELRDTKMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 227 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
+|++|.+ ..+++||+++..|+++++|+++|.+..++.|..++| +|+-+-+ +.|.+.|..||+
T Consensus 216 ~Fg~y~~~~~~~vipm~e~~lY~eD~iGLktLd~~gkl~f~~~~g-~H~~~~~--~~f~~~iipyL~ 279 (279)
T PF02089_consen 216 WFGFYDPGQDKEVIPMRETDLYKEDWIGLKTLDEAGKLHFLSVPG-DHMQFSD--EWFVNYIIPYLK 279 (279)
T ss_dssp GT-EE-TT-SS-EE-GGGSHHHHTTSSSHHHHHHTT-EEEEEESS-STT---H--HHHHHHTCGGC-
T ss_pred cccccccccCceeecchhcccccccccCHHHHHhCCCeEEEeeCC-ccceeCH--HHHHHHhHhhcC
Confidence 9999987 457999999999999999999999999999999999 9997655 589999999884
No 4
>PLN02633 palmitoyl protein thioesterase family protein
Probab=100.00 E-value=2.2e-34 Score=231.56 Aligned_cols=259 Identities=28% Similarity=0.425 Sum_probs=208.5
Q ss_pred CCCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCC-CCC-cchHHHHHHHHHHHHHHHHhcCCCceEEEEe
Q psy17147 3 RYRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSN-WAS-LEPMWNQVLFFGSLVMKMSQNHPEGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~-g~S-~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 78 (291)
...|+|+.||+|.+. .....+.+.+.+ .+|..++.+..-+. -.| ..+....++.+++.|.. ...+..-+++||+
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~-~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~-~~~l~~G~naIGf 101 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTN-LSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQ-MKELSQGYNIVGR 101 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHh-CCCCceEEEEECCCccccceeCHHHHHHHHHHHHhh-chhhhCcEEEEEE
Confidence 467899999999986 367777777744 56888877765322 223 35668889999999988 7777777999999
Q ss_pred ChHHHHHHHHHHhCCC-CCcceEEEecCCCCCccC-cc----ccccccccchhhhcccchhhhhcccccccccccCceeE
Q psy17147 79 SQGGLIARGILEQFPN-HNVRNFISLSSPHGGQYG-SN----QFGHFTEDESVVELRDTKMYTENSLGLRTLDKQGKLVL 152 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~-~~v~~li~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
|.||.+++.+++++++ .+|..+|.+++|+.|... +. ++++......+....++.+.+.
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~C~~~~~~C~~~~~ll~~~~Ys~~vQ~---------------- 165 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPRCGTSGLICKIANELIKGDVYSDFIQD---------------- 165 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCCCCcchhhHHHHHHHHhhCCccHHHHh----------------
Confidence 9999999999999998 679999999999999887 33 1222222222222333333322
Q ss_pred eecCCCccccccCCCccccccccchhccCccchhhhccCCCCCchhhhcccccccceEEEeeCCCceeccCccCcccccC
Q psy17147 153 ISVPGVDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFT 232 (291)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~ 232 (291)
.+.+++||++| ...+.|+..+.||+.+|+.+....+..|++++.++..+|++.+.+|+++.|++++||++|+
T Consensus 166 ----~lv~A~Yw~DP----~~~d~Yl~~s~FLadINNEr~~~~n~tyK~Nf~~L~~~Vlv~f~~DtvV~PkeSswFg~Y~ 237 (314)
T PLN02633 166 ----HLAPSGYYKIP----KDVTEYLKGSKYLPKLNNEIPDQRNQTYKDRFTSLQNLVLVKFQNDTVIVPKDSSWFGFYP 237 (314)
T ss_pred ----ccccccccCCc----hhHHHHHhcCcchhhhhCcCcccccHHHHHHHHhhhceEEEecCCCceECCCccccceecc
Confidence 25567899999 8899999999999999999865567899999999999999999999999999999999998
Q ss_pred CCc--eEEecccccccccccchhhhhhhcCCEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 233 EDE--SVVELRDTKMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 233 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
+++ +|+||++++.|+++++|+++|.++.++.+..+|| .|+-+-+ +.+.+.|..||
T Consensus 238 ~~~~~~vvpl~et~lY~eD~iGLktLD~~GkL~f~~v~G-~Hl~~s~--~~~~~~i~pyL 294 (314)
T PLN02633 238 DGEFEHLLSVQQTKLYTEDWIGLKTLDDAGKVKFVSVPG-GHLIMAD--EDVVKYVVPYL 294 (314)
T ss_pred CCCCceeechhhcchhhhhhhhHHHHHHCCCeEEEecCC-chhhcCH--HHHHHHHHHHh
Confidence 866 8999999999999999999999999999999999 8998543 35557777766
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.2e-29 Score=211.37 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=91.9
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--------HHHHHHHHHHHHHHHhcCC-CceE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--------WNQVLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--------~~~~~~~~~~i~~~~~~~~-~~~~ 74 (291)
+++|||+||+++++..|+.+++.|++. |+|+++|+||||.|..+. .++++++++++.+++++++ ++++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~---~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~ 105 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS---HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAF 105 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC---CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeE
Confidence 589999999999999999999999875 599999999999996432 4678999999999999998 9999
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
++||||||++++.+|.++|++ |.++|+++++..
T Consensus 106 lvGhS~Gg~va~~~a~~~p~~-v~~lili~~~~~ 138 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDAPEL-VRGVMLINISLR 138 (294)
T ss_pred EEEeCHHHHHHHHHHHhChhh-eeEEEEECCCcc
Confidence 999999999999999999997 999999987543
No 6
>KOG4178|consensus
Probab=99.96 E-value=8.5e-29 Score=200.02 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=97.3
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
.++|.|+++|||..+..+|+.+...|+.+ ||+|+++|+||+|.|..+. .++++.++.++..++++++ ++++++|
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~--~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvg 119 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASR--GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVG 119 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhc--ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEe
Confidence 35888999999999999999999999997 8999999999999996543 7899999999999999999 9999999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
|+||+++|+++|..+|++ |+++|+++.+..
T Consensus 120 HDwGaivaw~la~~~Per-v~~lv~~nv~~~ 149 (322)
T KOG4178|consen 120 HDWGAIVAWRLALFYPER-VDGLVTLNVPFP 149 (322)
T ss_pred ccchhHHHHHHHHhChhh-cceEEEecCCCC
Confidence 999999999999999997 999999988776
No 7
>PLN02965 Probable pheophorbidase
Probab=99.96 E-value=7.3e-29 Score=203.92 Aligned_cols=102 Identities=19% Similarity=0.208 Sum_probs=90.2
Q ss_pred CCCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch--HHHHHHHHHHHHHHHHhcCC--CceEEE
Q psy17147 1 MKRYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP--MWNQVLFFGSLVMKMSQNHP--EGIHLI 76 (291)
Q Consensus 1 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~~~~~~~~~~~i~~~~~~~~--~~~~lv 76 (291)
|+. ..|||+||++.+...|+.+++.|++. +|+|+++|+||||.|..+ ..++++++++++.+++++++ +++++|
T Consensus 1 ~~~-~~vvllHG~~~~~~~w~~~~~~L~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lv 77 (255)
T PLN02965 1 MPE-IHFVFVHGASHGAWCWYKLATLLDAA--GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILV 77 (255)
T ss_pred CCc-eEEEEECCCCCCcCcHHHHHHHHhhC--CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 443 35999999999999999999999765 889999999999999643 24678999999999999997 499999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||||||.+++.++.++|++ |.++|++++.
T Consensus 78 GhSmGG~ia~~~a~~~p~~-v~~lvl~~~~ 106 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDK-ISMAIYVAAA 106 (255)
T ss_pred ecCcchHHHHHHHHhCchh-eeEEEEEccc
Confidence 9999999999999999997 9999999764
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=1.1e-28 Score=205.24 Aligned_cols=101 Identities=21% Similarity=0.295 Sum_probs=91.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-MWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
.+||||+||++++...|..+++.|.+ +|+|+++|+||||.|..+ ..++++++++++.+++++++ ++++|||||||
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~---~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~G 101 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDP---DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWG 101 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhcc---CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHH
Confidence 47999999999999999999999976 579999999999999643 24678999999999999999 99999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
|++++.+|.++|++ |+++|+++++..
T Consensus 102 G~va~~~a~~~p~~-v~~lvl~~~~~~ 127 (276)
T TIGR02240 102 GALAQQFAHDYPER-CKKLILAATAAG 127 (276)
T ss_pred HHHHHHHHHHCHHH-hhheEEeccCCc
Confidence 99999999999997 999999987653
No 9
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=4.6e-28 Score=203.42 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHHHHHHHHHHHHHHhcCC-CceEEEEeCh
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-WNQVLFFGSLVMKMSQNHP-EGIHLIGYSQ 80 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~ 80 (291)
+++||||+||++++...|+.+++.|.+. ++|+++|+||||.|..+. .++++++++++..++++++ ++++++||||
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~---~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~ 102 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGL---GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDW 102 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhC---CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECH
Confidence 4689999999999999999999999885 399999999999996543 4678999999999999999 9999999999
Q ss_pred HHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 81 GGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 81 GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||.+|+.++.++|++ |+++|+++++
T Consensus 103 Gg~ia~~~a~~~p~~-v~~lil~~~~ 127 (295)
T PRK03592 103 GSALGFDWAARHPDR-VRGIAFMEAI 127 (295)
T ss_pred HHHHHHHHHHhChhh-eeEEEEECCC
Confidence 999999999999997 9999999874
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=1.2e-27 Score=201.46 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHHHHHHHhcCC-CceEEEEe
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSLVMKMSQNHP-EGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~i~~~~~~~~-~~~~lvGh 78 (291)
++++|||+||++++...|..+++.|++. ||+|+++|+||||.|..+ ..++.+++++++.+++++++ ++++++||
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~--gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGh 122 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAA--GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQ 122 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhC--CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3689999999999999999999999875 899999999999999643 24678999999999999999 89999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||||.+++.++.++|++ |.++|++++.
T Consensus 123 S~Gg~ia~~~a~~~p~~-v~~lvl~~~~ 149 (302)
T PRK00870 123 DWGGLIGLRLAAEHPDR-FARLVVANTG 149 (302)
T ss_pred ChHHHHHHHHHHhChhh-eeEEEEeCCC
Confidence 99999999999999997 9999999754
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.95 E-value=2.4e-27 Score=194.85 Aligned_cols=99 Identities=13% Similarity=0.221 Sum_probs=91.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
++|||||+||++++...|..++..|.+ +|+|+++|+||||.|..+...+++++++++.+++++++ ++++++|||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~G 91 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVN---DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMG 91 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhh---CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHH
Confidence 468999999999999999999999976 57999999999999976666788999999999999999 89999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecC
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
|.+++.+|.++|++ |+++|++++
T Consensus 92 g~va~~~a~~~~~~-v~~lvli~~ 114 (255)
T PRK10673 92 GKAVMALTALAPDR-IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHhCHhh-cceEEEEec
Confidence 99999999999997 999999964
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=4.1e-27 Score=196.48 Aligned_cols=100 Identities=16% Similarity=0.131 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
++++|||+||++.++..|+.+++.|.+ +|+|+++|+||||.|..+. .++++++++++.+++++++ ++++++|||
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S 109 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRD---RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQD 109 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhC---CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 368999999999999999999999976 5799999999999996543 4678999999999999999 899999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
|||.+++.++..+|++ |+++|+++++
T Consensus 110 ~Gg~va~~~a~~~p~~-v~~lvl~~~~ 135 (286)
T PRK03204 110 WGGPISMAVAVERADR-VRGVVLGNTW 135 (286)
T ss_pred ccHHHHHHHHHhChhh-eeEEEEECcc
Confidence 9999999999999997 9999988664
No 13
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=2.7e-27 Score=203.48 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=89.9
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch--HHHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP--MWNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
+++||||+||++++...|..+++.|.+ +|+|+++|+||||.|..+ ..++++++++++.+++++++ ++++|||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS 163 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK---NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNS 163 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc---CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 358999999999999999999999975 679999999999999654 35688999999999999998 999999999
Q ss_pred hHHHHHHHHHH-hCCCCCcceEEEecCCC
Q psy17147 80 QGGLIARGILE-QFPNHNVRNFISLSSPH 107 (291)
Q Consensus 80 ~GG~ia~~~a~-~~p~~~v~~li~~~~~~ 107 (291)
|||.+++.++. .+|++ |+++|+++++.
T Consensus 164 ~Gg~ia~~~a~~~~P~r-V~~LVLi~~~~ 191 (360)
T PLN02679 164 VGSLACVIAASESTRDL-VRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHHhcChhh-cCEEEEECCcc
Confidence 99999999887 47887 99999998753
No 14
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.94 E-value=1.1e-27 Score=195.39 Aligned_cols=100 Identities=18% Similarity=0.103 Sum_probs=89.3
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
++|+|||+||+++++..|+.+++.|+ +|+|+++|+||||.|..+...+++++++++.+++++++ ++++++|||||
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEALP----DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHcC----CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 36789999999999999999999883 57999999999999976666688999999999999999 99999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
|.+|+.++.++|+..|+++++++++
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999976349999988654
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=1.5e-27 Score=196.36 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=81.0
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGL 83 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ 83 (291)
+||||+||+++++..|+.+++.|.+ .|+|+++|+||||.|..+...+++++++++.+ +. +++++|||||||.
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~---~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ 86 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSS---HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----QAPDKAIWLGWSLGGL 86 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhc---CCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----cCCCCeEEEEECHHHH
Confidence 4699999999999999999999976 47999999999999965444566777766653 34 8899999999999
Q ss_pred HHHHHHHhCCCCCcceEEEecCC
Q psy17147 84 IARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 84 ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+|+.+|.++|++ |+++|+++++
T Consensus 87 ia~~~a~~~p~~-v~~lili~~~ 108 (256)
T PRK10349 87 VASQIALTHPER-VQALVTVASS 108 (256)
T ss_pred HHHHHHHhChHh-hheEEEecCc
Confidence 999999999997 9999999764
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=3.6e-27 Score=196.74 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCCCChhHHHHH---HHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-CceEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKF---KERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-EGIHLI 76 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~---~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-~~~~lv 76 (291)
++++|||+||++++...|..+ +..+.+. ||+|+++|+||||.|..+. ......+++++.++++.++ ++++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lv 106 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDA--GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLV 106 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhC--CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEE
Confidence 467899999999988888653 3445443 7999999999999996432 1112246788899999999 999999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||||||.+++.++.++|++ |+++|+++++.
T Consensus 107 G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 136 (282)
T TIGR03343 107 GNSMGGATALNFALEYPDR-IGKLILMGPGG 136 (282)
T ss_pred EECchHHHHHHHHHhChHh-hceEEEECCCC
Confidence 9999999999999999997 99999997653
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=2e-26 Score=191.53 Aligned_cols=101 Identities=17% Similarity=0.172 Sum_probs=90.5
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
.+++|||+||++++...|+.+++.|++ +|+|+++|+||||.|..+. .++++++++++.+++++++ ++++++|||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S 103 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR---SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHS 103 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh---CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 368999999999999999999999976 5799999999999996433 4678999999999999988 899999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||.+++.++.++|++ +.++|+++++.
T Consensus 104 ~Gg~~a~~~a~~~p~~-v~~~v~~~~~~ 130 (278)
T TIGR03056 104 AGAAIALRLALDGPVT-PRMVVGINAAL 130 (278)
T ss_pred ccHHHHHHHHHhCCcc-cceEEEEcCcc
Confidence 9999999999999997 99999997654
No 18
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.93 E-value=7.3e-27 Score=189.95 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=82.3
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGL 83 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ 83 (291)
.++|||+||++++...|..+++.|.+ +|+|+++|+||+|.|......+++++++++... ..++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA---HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQ---APDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc---CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHh---CCCCeEEEEEcHHHH
Confidence 37899999999999999999999975 689999999999999655455677777776553 337899999999999
Q ss_pred HHHHHHHhCCCCCcceEEEecCC
Q psy17147 84 IARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 84 ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+++.++.++|++ +.++|++++.
T Consensus 78 ~a~~~a~~~p~~-v~~~il~~~~ 99 (245)
T TIGR01738 78 VALHIAATHPDR-VRALVTVASS 99 (245)
T ss_pred HHHHHHHHCHHh-hheeeEecCC
Confidence 999999999997 9999998654
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=3.3e-26 Score=196.33 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=91.9
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-----HHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-----WNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-----~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
+++|||+||++++...|+.+++.|++ +|+|+++|+||||.|..+. .++++++++++..++++++ ++++|+|
T Consensus 127 ~~~ivllHG~~~~~~~w~~~~~~L~~---~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG 203 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYRKVLPVLSK---NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVV 203 (383)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc---CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEE
Confidence 67999999999999999999999975 6799999999999996543 4689999999999999999 9999999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||+||++++.++.++|++ |.++|+++++.
T Consensus 204 ~s~GG~ia~~~a~~~P~~-v~~lILi~~~~ 232 (383)
T PLN03084 204 QGYFSPPVVKYASAHPDK-IKKLILLNPPL 232 (383)
T ss_pred ECHHHHHHHHHHHhChHh-hcEEEEECCCC
Confidence 999999999999999997 99999998764
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.93 E-value=3.5e-26 Score=199.88 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=87.9
Q ss_pred CCeEEEEcCCCCChhHHHH-HHHHHHHh-CCCcEEEEecCCCCCCCcch--HHHHHHHHHHHHH-HHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEK-FKERIERF-HPGTKVVIPDNYSNWASLEP--MWNQVLFFGSLVM-KMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~-~~~~L~~~-~~g~~v~~~D~~G~g~S~~~--~~~~~~~~~~~i~-~~~~~~~-~~~~lvG 77 (291)
++||||+||++++...|.. ++..|.+. ..+|+|+++|+||||.|..+ ..++++++++++. .++++++ ++++++|
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVG 280 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVA 280 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 4799999999999999985 45666531 12789999999999999654 3467889999984 7889998 9999999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||||++++.+|.++|++ |+++|+++++.
T Consensus 281 hSmGG~iAl~~A~~~Pe~-V~~LVLi~~~~ 309 (481)
T PLN03087 281 HSLGCILALALAVKHPGA-VKSLTLLAPPY 309 (481)
T ss_pred ECHHHHHHHHHHHhChHh-ccEEEEECCCc
Confidence 999999999999999997 99999998764
No 21
>KOG1454|consensus
Probab=99.93 E-value=3.9e-26 Score=191.76 Aligned_cols=105 Identities=20% Similarity=0.270 Sum_probs=92.1
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC-c--chHHHHHHHHHHHHHHHHhcCC-CceEEEEe
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS-L--EPMWNQVLFFGSLVMKMSQNHP-EGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S-~--~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGh 78 (291)
..+|||++|||+++...|+.++..|...+ |++|+++|++|+|.+ . ....++..+..+.+..+..+.. +++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~-~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAK-GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhcccccccc-ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEe
Confidence 57899999999999999999999999875 799999999999944 3 3336888999999999998888 88999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEE---EecCCCCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFI---SLSSPHGG 109 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li---~~~~~~~~ 109 (291)
|+||.+|+.+|..+|+. |+++| +++++...
T Consensus 136 S~Gg~va~~~Aa~~P~~-V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPET-VDSLVLLDLLGPPVYS 168 (326)
T ss_pred CcHHHHHHHHHHhCccc-ccceeeeccccccccc
Confidence 99999999999999997 99999 66555543
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.93 E-value=3.7e-26 Score=187.41 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=89.3
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch--HHHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP--MWNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
++++|||+||+++++..|..+++.|.+ +|+|+++|+||||.|..+ ..++++++++++.+++++++ ++++++|||
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S 88 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ---RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHA 88 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh---ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 367899999999999999999988875 689999999999999543 35678999999999999998 899999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
|||++++.++.++|+. |+++|++++.
T Consensus 89 ~Gg~~a~~~a~~~~~~-v~~~i~~~~~ 114 (257)
T TIGR03611 89 LGGLIGLQLALRYPER-LLSLVLINAW 114 (257)
T ss_pred hhHHHHHHHHHHChHH-hHHheeecCC
Confidence 9999999999999986 9999999754
No 23
>KOG4409|consensus
Probab=99.93 E-value=4.4e-26 Score=184.88 Aligned_cols=102 Identities=21% Similarity=0.208 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-----HHHHHHHHHHHHHHHhcCC-CceEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-----WNQVLFFGSLVMKMSQNHP-EGIHLI 76 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-----~~~~~~~~~~i~~~~~~~~-~~~~lv 76 (291)
..+|+||+||+|++...|-.-.+.|+.. .+|+++|++|+|+|.+|. ....+.+++.|+++..+.+ .+.+|+
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~~---~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~Kmilv 165 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAKI---RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILV 165 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhhc---CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEe
Confidence 4789999999999999998888888874 599999999999996554 3334689999999999999 999999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
||||||+++..||.+||++ |++||++++...
T Consensus 166 GHSfGGYLaa~YAlKyPer-V~kLiLvsP~Gf 196 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPER-VEKLILVSPWGF 196 (365)
T ss_pred eccchHHHHHHHHHhChHh-hceEEEeccccc
Confidence 9999999999999999998 999999977543
No 24
>PLN02578 hydrolase
Probab=99.93 E-value=7.1e-26 Score=194.48 Aligned_cols=101 Identities=20% Similarity=0.177 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHHHHHHHHHHHHHhcCC-CceEEEEeCh
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-MWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQ 80 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~ 80 (291)
+++||||+||++++...|..+++.|.+ +|+|+++|+||||.|..+ ..++.+.+++++.++++++. ++++++||||
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~~---~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~ 161 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELAK---KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSL 161 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc---CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECH
Confidence 467899999999999999999999975 579999999999999654 35677888889999898887 8999999999
Q ss_pred HHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 81 GGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 81 GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||++++.+|.++|++ |+++|+++++.
T Consensus 162 Gg~ia~~~A~~~p~~-v~~lvLv~~~~ 187 (354)
T PLN02578 162 GGFTALSTAVGYPEL-VAGVALLNSAG 187 (354)
T ss_pred HHHHHHHHHHhChHh-cceEEEECCCc
Confidence 999999999999997 99999997643
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=2e-25 Score=191.57 Aligned_cols=101 Identities=19% Similarity=0.042 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCCChh-HHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-------Cce
Q psy17147 4 YRPVLVIHGILSGNK-TLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-------EGI 73 (291)
Q Consensus 4 ~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-------~~~ 73 (291)
.++|||+||++++.. .|+.+++.|.+. ||+|+++|+||||.|..+. ..+++++++++.++++.+. .++
T Consensus 87 ~~~iv~lHG~~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~ 164 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFFFEGIARKIASS--GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPS 164 (349)
T ss_pred CeEEEEECCCCCccchHHHHHHHHHHhC--CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCE
Confidence 457999999999875 578999999876 8999999999999996432 2356777777776665443 479
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 74 HLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+|+||||||++++.++.++|++ +.++|++++..
T Consensus 165 ~LvGhSmGG~val~~a~~~p~~-v~glVLi~p~~ 197 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLKQPNA-WDGAILVAPMC 197 (349)
T ss_pred EEEEeccchHHHHHHHHhCcch-hhheeEecccc
Confidence 9999999999999999999997 99999997643
No 26
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=4.5e-25 Score=182.64 Aligned_cols=101 Identities=22% Similarity=0.275 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC--CceEEEEe
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP--EGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~--~~~~lvGh 78 (291)
++|+|||+||+++++..|..++..|.+. ||+|+++|+||||.|.... ..+++++++++.++++++. +++++|||
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~--g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENS--GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhC--CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 4678999999999999999999999875 8999999999999874322 3678889999999998884 89999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||||+++..++.++|++ |+++|++++.
T Consensus 95 S~GG~v~~~~a~~~p~~-v~~lv~~~~~ 121 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKK-ICLAVYVAAT 121 (273)
T ss_pred CchHHHHHHHHHhChhh-eeEEEEeccc
Confidence 99999999999999987 9999999653
No 27
>PRK06489 hypothetical protein; Provisional
Probab=99.92 E-value=9.1e-26 Score=194.33 Aligned_cols=102 Identities=19% Similarity=0.275 Sum_probs=83.1
Q ss_pred CCeEEEEcCCCCChhHHH--HHHHHHHH-----hCCCcEEEEecCCCCCCCcchH--------HHHHHHHHHHHHHH-Hh
Q psy17147 4 YRPVLVIHGILSGNKTLE--KFKERIER-----FHPGTKVVIPDNYSNWASLEPM--------WNQVLFFGSLVMKM-SQ 67 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~--~~~~~L~~-----~~~g~~v~~~D~~G~g~S~~~~--------~~~~~~~~~~i~~~-~~ 67 (291)
+|||||+||++++...|. .+.+.|.. ...+|+|+++|+||||.|..+. .++++++++++..+ ++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999988886 55555511 0126899999999999996432 36788999888775 47
Q ss_pred cCC-CceE-EEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 68 NHP-EGIH-LIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 68 ~~~-~~~~-lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+++ ++++ ++||||||++|+.+|.++|++ |+++|++++.
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~-V~~LVLi~s~ 188 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPDF-MDALMPMASQ 188 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCchh-hheeeeeccC
Confidence 788 7875 899999999999999999997 9999999764
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.92 E-value=1.2e-25 Score=183.36 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHHHHHHHHHHHHHhcCC-CceEEEEeCh
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-MWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQ 80 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~ 80 (291)
+.|+|||+||++++...|..+++.|.. ||+|+++|+||||.|..+ ...+++++++++.++++.++ ++++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP---DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc---ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCc
Confidence 456789999999999999999999864 789999999999998533 34578899999999999988 8999999999
Q ss_pred HHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 81 GGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 81 GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||.+++.+|.++|++ |.++|+++++.
T Consensus 89 Gg~~a~~~a~~~p~~-v~~li~~~~~~ 114 (251)
T TIGR02427 89 GGLIAQGLAARRPDR-VRALVLSNTAA 114 (251)
T ss_pred hHHHHHHHHHHCHHH-hHHHhhccCcc
Confidence 999999999999987 99999987653
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.91 E-value=1e-24 Score=177.54 Aligned_cols=99 Identities=21% Similarity=0.222 Sum_probs=87.6
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHH-HHHHHhcCC-CceEEEEe
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSL-VMKMSQNHP-EGIHLIGY 78 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~-i~~~~~~~~-~~~~lvGh 78 (291)
+++|||+||++++...|..+++.|. . ||+|+++|+||+|.|..+ ...++++++++ +..+++.++ ++++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-P--HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-c--cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 4789999999999999999999997 3 889999999999999643 35677888888 788888887 89999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||||.+++.++.++|+. |.+++++++.
T Consensus 78 S~Gg~ia~~~a~~~~~~-v~~lil~~~~ 104 (251)
T TIGR03695 78 SMGGRIALYYALQYPER-VQGLILESGS 104 (251)
T ss_pred ccHHHHHHHHHHhCchh-eeeeEEecCC
Confidence 99999999999999996 9999998654
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=1.3e-24 Score=180.76 Aligned_cols=98 Identities=22% Similarity=0.182 Sum_probs=79.1
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH------HHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM------WNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~------~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
|+++||+++++..|+.+++.|.++ ||+|+++|+||||.|.... ...++++.+.+..+.+..+ .+++++|||
T Consensus 28 v~llHG~~~~~~~~~~~~~~l~~~--g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S 105 (276)
T PHA02857 28 VFISHGAGEHSGRYEELAENISSL--GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHS 105 (276)
T ss_pred EEEeCCCccccchHHHHHHHHHhC--CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcC
Confidence 555699999999999999999886 8999999999999985321 2334445555544444455 789999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||++|+.++.++|++ ++++|+++++.
T Consensus 106 ~GG~ia~~~a~~~p~~-i~~lil~~p~~ 132 (276)
T PHA02857 106 MGATISILAAYKNPNL-FTAMILMSPLV 132 (276)
T ss_pred chHHHHHHHHHhCccc-cceEEEecccc
Confidence 9999999999999997 99999997754
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=3.6e-24 Score=182.28 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=85.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-------HHHHHHHHHHHHHHHhcC----C-C
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-------WNQVLFFGSLVMKMSQNH----P-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-------~~~~~~~~~~i~~~~~~~----~-~ 71 (291)
+++|||+||++++...|..++..|.+. ||+|+++|+||||.|..+. ..+++++++++..+++.+ + .
T Consensus 54 ~~~vll~HG~~~~~~~y~~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 131 (330)
T PRK10749 54 DRVVVICPGRIESYVKYAELAYDLFHL--GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYR 131 (330)
T ss_pred CcEEEEECCccchHHHHHHHHHHHHHC--CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCC
Confidence 467999999999999999999888876 9999999999999985321 246777777777777654 5 7
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+++++||||||.+++.++.++|+. ++++|++++..
T Consensus 132 ~~~l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~p~~ 166 (330)
T PRK10749 132 KRYALAHSMGGAILTLFLQRHPGV-FDAIALCAPMF 166 (330)
T ss_pred CeEEEEEcHHHHHHHHHHHhCCCC-cceEEEECchh
Confidence 999999999999999999999997 99999886643
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.91 E-value=1.1e-25 Score=180.66 Aligned_cols=98 Identities=21% Similarity=0.338 Sum_probs=88.6
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-CceEEEEeChHH
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGG 82 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG 82 (291)
|||+||++++...|..+++.|+ + ||+|+++|+||+|.|..+. ..+++++++++.+++++++ ++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-R--GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-T--TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-C--CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccc
Confidence 7999999999999999999995 3 8999999999999996543 5678999999999999999 999999999999
Q ss_pred HHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 83 LIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 83 ~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
.+++.++.++|++ |+++|+++++..
T Consensus 78 ~~a~~~a~~~p~~-v~~~vl~~~~~~ 102 (228)
T PF12697_consen 78 MIALRLAARYPDR-VKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHHSGGG-EEEEEEESESSS
T ss_pred ccccccccccccc-cccceeeccccc
Confidence 9999999999996 999999987764
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.3e-23 Score=182.69 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=85.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH------HHHHHHHHHHHHHHHhcCC-CceEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM------WNQVLFFGSLVMKMSQNHP-EGIHL 75 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~------~~~~~~~~~~i~~~~~~~~-~~~~l 75 (291)
++++|||+||++++...|...+..|.+ +|+|+++|+||||.|..+. ....+.+++++.++++.++ +++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~---~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALAS---RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHh---CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 358899999999999999988888876 5799999999999986432 1122346777888888888 89999
Q ss_pred EEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 76 IGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+||||||.+++.+|.++|++ |.++|+++++.
T Consensus 181 vGhS~GG~la~~~a~~~p~~-v~~lvl~~p~~ 211 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEH-VQHLILVGPAG 211 (402)
T ss_pred EEECHHHHHHHHHHHhCchh-hcEEEEECCcc
Confidence 99999999999999999997 99999997654
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.90 E-value=3.9e-24 Score=178.12 Aligned_cols=101 Identities=21% Similarity=0.291 Sum_probs=85.4
Q ss_pred CCeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH----HHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM----WNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~----~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
+++|||+||+++++ ..|..+...+.+. ||+|+++|+||+|.|..+. ..+++++++++..++++++ ++++++|
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG 102 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEE--GREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLG 102 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhc--CCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 67899999987665 4566666667664 8999999999999996432 2678999999999999998 8899999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||||.+++.++.++|++ +.++|++++..
T Consensus 103 ~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 131 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQH-LKGLIISSMLD 131 (288)
T ss_pred eehHHHHHHHHHHhCccc-cceeeEecccc
Confidence 999999999999999997 99999886543
No 35
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=3.6e-24 Score=182.58 Aligned_cols=100 Identities=15% Similarity=0.035 Sum_probs=79.4
Q ss_pred CeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-------CceE
Q psy17147 5 RPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-------EGIH 74 (291)
Q Consensus 5 ~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-------~~~~ 74 (291)
+.|||+||++.+. ..|..++..|.++ ||+|+++|+||||.|.... ..+++.+++++.++++.+. .+++
T Consensus 60 ~~VvllHG~~~~~~~~~~~~~~~L~~~--Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 60 ALIFMVHGYGNDISWTFQSTAIFLAQM--GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred eEEEEEcCCCCCcceehhHHHHHHHhC--CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 3499999998764 4677788888876 9999999999999995322 2345666666666665432 4799
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|+||||||++++.++.++|++ |+++|++++..
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~~~~ 169 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEG-FDGAVLVAPMC 169 (330)
T ss_pred EEEecchhHHHHHHHhcCccc-ceeEEEecccc
Confidence 999999999999999999997 99999997754
No 36
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=1.1e-24 Score=186.41 Aligned_cols=100 Identities=18% Similarity=0.240 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCCChh------------HHHHHHH---HHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc
Q psy17147 4 YRPVLVIHGILSGNK------------TLEKFKE---RIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN 68 (291)
Q Consensus 4 ~~~vvllHG~~~~~~------------~~~~~~~---~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~ 68 (291)
++|+||+||+.++.. .|..+++ .|... +|+|+++|+||||.|... .++++++++++.+++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~--~~~Vi~~Dl~G~g~s~~~-~~~~~~~a~dl~~ll~~ 133 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPA--RFRLLAFDFIGADGSLDV-PIDTADQADAIALLLDA 133 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCcc--ccEEEEEeCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 557888887777765 6888876 46322 679999999999988533 45678899999999999
Q ss_pred CC-Cce-EEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 69 HP-EGI-HLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 69 ~~-~~~-~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
++ ++. ++|||||||++|+.+|.++|++ |.++|++++..
T Consensus 134 l~l~~~~~lvG~SmGG~vA~~~A~~~P~~-V~~LvLi~s~~ 173 (343)
T PRK08775 134 LGIARLHAFVGYSYGALVGLQFASRHPAR-VRTLVVVSGAH 173 (343)
T ss_pred cCCCcceEEEEECHHHHHHHHHHHHChHh-hheEEEECccc
Confidence 99 664 7999999999999999999997 99999997654
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.89 E-value=1.5e-23 Score=181.72 Aligned_cols=101 Identities=21% Similarity=0.201 Sum_probs=89.6
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcc-hHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLE-PMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~-~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
+++|||+||++++...|..+.+.|.+ +|+|+++|+||||.|.. ....+++++++++..++++++ .+++++|||||
T Consensus 131 ~~~vl~~HG~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~G 207 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWLFNHAALAA---GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMG 207 (371)
T ss_pred CCeEEEECCCCCccchHHHHHHHHhc---CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechH
Confidence 67899999999999999999999876 57999999999999842 335578899999999999998 89999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
|.+++.+|.++|++ +.++|+++++..
T Consensus 208 g~~a~~~a~~~~~~-v~~lv~~~~~~~ 233 (371)
T PRK14875 208 GAVALRLAARAPQR-VASLTLIAPAGL 233 (371)
T ss_pred HHHHHHHHHhCchh-eeEEEEECcCCc
Confidence 99999999999986 999999976643
No 38
>PLN02511 hydrolase
Probab=99.89 E-value=3.9e-23 Score=178.97 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCCChh--HHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-----HHHHHHHHHHHHHHHhcCC-CceE
Q psy17147 3 RYRPVLVIHGILSGNK--TLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-----WNQVLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-----~~~~~~~~~~i~~~~~~~~-~~~~ 74 (291)
++|+||++||+++++. .+..++..+.+. ||+|+++|+||||.|.... ....+|+.+.+..+..+++ .+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~--g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSK--GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHC--CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 3567999999988764 345677666665 9999999999999985321 2235666666666666666 7899
Q ss_pred EEEeChHHHHHHHHHHhCCCC-CcceEEEecCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNH-NVRNFISLSSPHG 108 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~-~v~~li~~~~~~~ 108 (291)
++||||||.+++.++.++++. +|.+++++++|..
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 999999999999999999873 3888888877653
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.89 E-value=3.4e-24 Score=184.00 Aligned_cols=101 Identities=17% Similarity=0.119 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCChh-----------HHHHHHH---HHHHhCCCcEEEEecCCC--CCCCcch-------------HHHH
Q psy17147 4 YRPVLVIHGILSGNK-----------TLEKFKE---RIERFHPGTKVVIPDNYS--NWASLEP-------------MWNQ 54 (291)
Q Consensus 4 ~~~vvllHG~~~~~~-----------~~~~~~~---~L~~~~~g~~v~~~D~~G--~g~S~~~-------------~~~~ 54 (291)
+++|||+||++++.. .|+.++. .|... +|+|+++|+|| ||.|... ..++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~--~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~ 108 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTD--RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLIT 108 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCC--ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCc
Confidence 578999999999873 4777752 44333 78999999999 5555320 1467
Q ss_pred HHHHHHHHHHHHhcCC-Cc-eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 55 VLFFGSLVMKMSQNHP-EG-IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 55 ~~~~~~~i~~~~~~~~-~~-~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
++++++++..++++++ ++ ++++||||||++++.++.++|++ |+++|++++..
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 162 (351)
T TIGR01392 109 IRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPER-VRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHh-hheEEEEccCC
Confidence 8999999999999999 77 99999999999999999999997 99999997754
No 40
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=1.9e-23 Score=180.79 Aligned_cols=101 Identities=16% Similarity=0.194 Sum_probs=81.9
Q ss_pred CCeEEEEcCCCCChhH-------------HHHHHH---HHHHhCCCcEEEEecCCC-CCCCcch---------------H
Q psy17147 4 YRPVLVIHGILSGNKT-------------LEKFKE---RIERFHPGTKVVIPDNYS-NWASLEP---------------M 51 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~-------------~~~~~~---~L~~~~~g~~v~~~D~~G-~g~S~~~---------------~ 51 (291)
+|+|||+||++++... |+.++. .|.. .+|+|+++|++| +|.|..+ .
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT--DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc--cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 5789999999999974 666652 2312 278999999998 3444211 1
Q ss_pred HHHHHHHHHHHHHHHhcCC-Cc-eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 52 WNQVLFFGSLVMKMSQNHP-EG-IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 52 ~~~~~~~~~~i~~~~~~~~-~~-~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.++++++++++.+++++++ ++ ++++||||||++++.+|.++|++ |+++|++++..
T Consensus 126 ~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 182 (379)
T PRK00175 126 VITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDR-VRSALVIASSA 182 (379)
T ss_pred cCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHh-hhEEEEECCCc
Confidence 4689999999999999999 77 58999999999999999999997 99999997654
No 41
>PRK07581 hypothetical protein; Validated
Probab=99.87 E-value=5.5e-23 Score=175.93 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=73.1
Q ss_pred CeEEEEcCCCCChhHHHHHH---HHHHHhCCCcEEEEecCCCCCCCcchH----HHHH---------HHHHHHHHHHHhc
Q psy17147 5 RPVLVIHGILSGNKTLEKFK---ERIERFHPGTKVVIPDNYSNWASLEPM----WNQV---------LFFGSLVMKMSQN 68 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~---~~L~~~~~g~~v~~~D~~G~g~S~~~~----~~~~---------~~~~~~i~~~~~~ 68 (291)
++||++||++++...|..++ +.|... +|+|+++|+||||.|..+. .+++ ++++.....++++
T Consensus 42 ~~vll~~~~~~~~~~~~~~~~~~~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 42 NAILYPTWYSGTHQDNEWLIGPGRALDPE--KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CEEEEeCCCCCCcccchhhccCCCccCcC--ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44666777777766676543 356433 7899999999999996432 1222 3333333346778
Q ss_pred CC-Cc-eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 69 HP-EG-IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 69 ~~-~~-~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
++ ++ ++||||||||++|+.+|.++|++ |+++|++++..
T Consensus 120 lgi~~~~~lvG~S~GG~va~~~a~~~P~~-V~~Lvli~~~~ 159 (339)
T PRK07581 120 FGIERLALVVGWSMGAQQTYHWAVRYPDM-VERAAPIAGTA 159 (339)
T ss_pred hCCCceEEEEEeCHHHHHHHHHHHHCHHH-HhhheeeecCC
Confidence 99 88 57999999999999999999997 99999996644
No 42
>KOG2382|consensus
Probab=99.87 E-value=5.7e-23 Score=166.46 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=88.4
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcC----C-CceEEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNH----P-EGIHLIG 77 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~----~-~~~~lvG 77 (291)
+.||++++||+.|+..+|+.+...|+... +..++++|.|.||.|......+-+.+++++..+++.. . .+++++|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l-~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKL-GRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccc-cCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 57899999999999999999999999876 8899999999999997665555778888888888766 3 7899999
Q ss_pred eChHH-HHHHHHHHhCCCCCcceEEEe-cCC
Q psy17147 78 YSQGG-LIARGILEQFPNHNVRNFISL-SSP 106 (291)
Q Consensus 78 hS~GG-~ia~~~a~~~p~~~v~~li~~-~~~ 106 (291)
||||| .+++..+...|+. +.++|++ .+|
T Consensus 130 HsmGG~~~~m~~t~~~p~~-~~rliv~D~sP 159 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDL-IERLIVEDISP 159 (315)
T ss_pred cCcchHHHHHHHHHhcCcc-cceeEEEecCC
Confidence 99999 7778888889997 9999988 455
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=3.1e-22 Score=172.89 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=76.6
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhc----CC-CceEEEE
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQN----HP-EGIHLIG 77 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~----~~-~~~~lvG 77 (291)
++||++||++++...|..+++.|.+. ||+|+++|+||||.|.... ..+.+.+.+++..+++. .+ .+++++|
T Consensus 137 ~~Vl~lHG~~~~~~~~~~~a~~L~~~--Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 137 GILIIIHGLNEHSGRYLHFAKQLTSC--GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred eEEEEECCchHHHHHHHHHHHHHHHC--CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 57999999999999999999999886 9999999999999986432 22344455555544443 33 5899999
Q ss_pred eChHHHHHHHHHHhCCC--CCcceEEEecCC
Q psy17147 78 YSQGGLIARGILEQFPN--HNVRNFISLSSP 106 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~--~~v~~li~~~~~ 106 (291)
|||||.+++.++. +|+ ..++++|+.++.
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPA 244 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcc
Confidence 9999999998775 554 138999988654
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=2.5e-22 Score=199.30 Aligned_cols=100 Identities=20% Similarity=0.242 Sum_probs=88.7
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch---------HHHHHHHHHHHHHHHHhcCC-Cc
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP---------MWNQVLFFGSLVMKMSQNHP-EG 72 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---------~~~~~~~~~~~i~~~~~~~~-~~ 72 (291)
.+++|||+||++++...|..+++.|.+ +|+|+++|+||||.|... ..++++++++++..++++++ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~---~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG---SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC---CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 357899999999999999999999975 579999999999998532 24568899999999999998 99
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
++++||||||.+++.++.++|++ |+++|++++.
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~~-V~~lVlis~~ 1479 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSDK-IEGAVIISGS 1479 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChHh-hCEEEEECCC
Confidence 99999999999999999999997 9999999653
No 45
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=6.9e-22 Score=164.51 Aligned_cols=100 Identities=20% Similarity=0.243 Sum_probs=84.8
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc---chHHHHHHHHHHHHHHHHhcC----C-CceEEE
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL---EPMWNQVLFFGSLVMKMSQNH----P-EGIHLI 76 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~---~~~~~~~~~~~~~i~~~~~~~----~-~~~~lv 76 (291)
-.||++||++.++..|..+++.|... ||.|+++|+||||.|. .....++.++.+++..+++.. + .+++++
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~--G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~ 112 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAAR--GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLL 112 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhC--CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEE
Confidence 46899999999999999999999997 9999999999999995 223444667777766666543 3 899999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||||||.+++.++.+++.. |.++|+.++..
T Consensus 113 gHSmGg~Ia~~~~~~~~~~-i~~~vLssP~~ 142 (298)
T COG2267 113 GHSMGGLIALLYLARYPPR-IDGLVLSSPAL 142 (298)
T ss_pred EeCcHHHHHHHHHHhCCcc-ccEEEEECccc
Confidence 9999999999999999975 99999886654
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=8e-22 Score=149.95 Aligned_cols=101 Identities=17% Similarity=0.255 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-----HHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-----WNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-----~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
+..|+|||||.|+.+..+.+.+.|+++ ||.|+++.+||||...... .+-+++..+.... +.+.+ +.+.++|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~--GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~-L~~~gy~eI~v~G 91 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNEN--GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRD-LKEAGYDEIAVVG 91 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHC--CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHH-HHHcCCCeEEEEe
Confidence 568999999999999999999999997 9999999999999985332 2333444444444 44445 8999999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCCCCc
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
.||||.+++.+|..+| ++++|.+++|....
T Consensus 92 lSmGGv~alkla~~~p---~K~iv~m~a~~~~k 121 (243)
T COG1647 92 LSMGGVFALKLAYHYP---PKKIVPMCAPVNVK 121 (243)
T ss_pred ecchhHHHHHHHhhCC---ccceeeecCCcccc
Confidence 9999999999999998 89999999887653
No 47
>PRK10985 putative hydrolase; Provisional
Probab=99.85 E-value=2.6e-21 Score=164.28 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=81.4
Q ss_pred CCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch--H---HHHHHHHHHHHHHHHhcCC-CceEE
Q psy17147 4 YRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEP--M---WNQVLFFGSLVMKMSQNHP-EGIHL 75 (291)
Q Consensus 4 ~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~---~~~~~~~~~~i~~~~~~~~-~~~~l 75 (291)
.|.||++||++++. ..+..+++.|.+. ||+|+++|+||||.+... . ...++|+...+..+.++++ .++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~ 135 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKR--GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAA 135 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHC--CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEE
Confidence 56899999999874 3466788999886 999999999999977422 1 1235677677777666677 88999
Q ss_pred EEeChHHHHHHHHHHhCCCC-CcceEEEecCCCCC
Q psy17147 76 IGYSQGGLIARGILEQFPNH-NVRNFISLSSPHGG 109 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~-~v~~li~~~~~~~~ 109 (291)
+||||||.+++.++.++++. .+.++|++++|...
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 99999999988888876542 38999999888754
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=99.84 E-value=5.2e-21 Score=175.29 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHHHHHHHhcCC--CceEEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSLVMKMSQNHP--EGIHLIG 77 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~i~~~~~~~~--~~~~lvG 77 (291)
.+++|||+||++++...|..+.+.|.+ +|+|+++|+||||.|..+ ..++++++++++..++++++ ++++++|
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~~---~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvG 100 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLAD---RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLA 100 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhhc---ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 367899999999999999999999954 789999999999999643 25678999999999999987 4599999
Q ss_pred eChHHHHHHHHHHhC--CCCCcceEEEecCC
Q psy17147 78 YSQGGLIARGILEQF--PNHNVRNFISLSSP 106 (291)
Q Consensus 78 hS~GG~ia~~~a~~~--p~~~v~~li~~~~~ 106 (291)
|||||.+++.++.+. +.. +..++.++++
T Consensus 101 hS~Gg~~a~~~a~~~~~~~~-v~~~~~~~~~ 130 (582)
T PRK05855 101 HDWGSIQGWEAVTRPRAAGR-IASFTSVSGP 130 (582)
T ss_pred cChHHHHHHHHHhCccchhh-hhhheeccCC
Confidence 999999999888773 222 4455555443
No 49
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.83 E-value=8.3e-21 Score=160.11 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-CceEEEEe
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGIHLIGY 78 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~~lvGh 78 (291)
+++||||+||+.++...+ .+...+... +|+|+++|+||||.|..+. ..+.+++++++..++++++ ++++++||
T Consensus 26 ~~~~lvllHG~~~~~~~~-~~~~~~~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~ 102 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTDP-GCRRFFDPE--TYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGG 102 (306)
T ss_pred CCCEEEEECCCCCCCCCH-HHHhccCcc--CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 367899999988776543 333444333 7899999999999996432 3567889999999999998 89999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
||||.+++.++.++|++ |.++|++++..
T Consensus 103 S~GG~ia~~~a~~~p~~-v~~lvl~~~~~ 130 (306)
T TIGR01249 103 SWGSTLALAYAQTHPEV-VTGLVLRGIFL 130 (306)
T ss_pred CHHHHHHHHHHHHChHh-hhhheeecccc
Confidence 99999999999999997 99999997643
No 50
>KOG1455|consensus
Probab=99.83 E-value=6e-21 Score=152.39 Aligned_cols=99 Identities=20% Similarity=0.068 Sum_probs=77.8
Q ss_pred eEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcc--hH----HHHHHHHHHHHHHHHhc--CC-CceEE
Q psy17147 6 PVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLE--PM----WNQVLFFGSLVMKMSQN--HP-EGIHL 75 (291)
Q Consensus 6 ~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~--~~----~~~~~~~~~~i~~~~~~--~~-~~~~l 75 (291)
.|+++||++++. ..+..++..|+.. ||.|+++|++|||.|.. .. ..-++|....+..+..+ .. .+.++
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~--g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL 133 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKS--GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFL 133 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhC--CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeee
Confidence 378899999987 7889999999987 99999999999999952 22 33344444444433222 23 78999
Q ss_pred EEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 76 IGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.||||||+|++.++.+.|+. ..++|++++..
T Consensus 134 ~GeSMGGAV~Ll~~~k~p~~-w~G~ilvaPmc 164 (313)
T KOG1455|consen 134 FGESMGGAVALLIALKDPNF-WDGAILVAPMC 164 (313)
T ss_pred eecCcchHHHHHHHhhCCcc-cccceeeeccc
Confidence 99999999999999999986 99999987654
No 51
>PRK11071 esterase YqiA; Provisional
Probab=99.82 E-value=7.6e-20 Score=142.87 Aligned_cols=89 Identities=19% Similarity=0.302 Sum_probs=74.6
Q ss_pred CeEEEEcCCCCChhHHHH--HHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 5 RPVLVIHGILSGNKTLEK--FKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~--~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
|+||++||++++...|.. +.+.+.+..++|+|+++|+||++ +++++.+.+++++++ ++++++|||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~~~~~lvG~S~G 71 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGGDPLGLVGSSLG 71 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 479999999999999984 45777765558999999999984 357788888888888 89999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|.+++.+|.++|. ++|+++++.
T Consensus 72 g~~a~~~a~~~~~----~~vl~~~~~ 93 (190)
T PRK11071 72 GYYATWLSQCFML----PAVVVNPAV 93 (190)
T ss_pred HHHHHHHHHHcCC----CEEEECCCC
Confidence 9999999999983 357776654
No 52
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.82 E-value=2.5e-20 Score=158.42 Aligned_cols=101 Identities=25% Similarity=0.214 Sum_probs=76.6
Q ss_pred CeEEEEcCCCCChh-HH-------------------------HHHHHHHHHhCCCcEEEEecCCCCCCCcch-----HHH
Q psy17147 5 RPVLVIHGILSGNK-TL-------------------------EKFKERIERFHPGTKVVIPDNYSNWASLEP-----MWN 53 (291)
Q Consensus 5 ~~vvllHG~~~~~~-~~-------------------------~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-----~~~ 53 (291)
-.|+++||+++++. .+ ..+++.|.+. ||+|+++|+||||.|... ...
T Consensus 22 g~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~--G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 22 GIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN--GYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred EEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC--CCcEEEecccccCCCccccccccchh
Confidence 35899999999985 21 4678999887 999999999999998532 124
Q ss_pred HHHHHHHHHHHHHhc-----------------------C--CCceEEEEeChHHHHHHHHHHhCCC-------CCcceEE
Q psy17147 54 QVLFFGSLVMKMSQN-----------------------H--PEGIHLIGYSQGGLIARGILEQFPN-------HNVRNFI 101 (291)
Q Consensus 54 ~~~~~~~~i~~~~~~-----------------------~--~~~~~lvGhS~GG~ia~~~a~~~p~-------~~v~~li 101 (291)
+++++++++..+++. . +.|++++||||||++++.+++++++ ..+.++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 566676666666543 2 2579999999999999999987643 1388888
Q ss_pred EecCCC
Q psy17147 102 SLSSPH 107 (291)
Q Consensus 102 ~~~~~~ 107 (291)
+++++.
T Consensus 180 ~~s~~~ 185 (332)
T TIGR01607 180 SLSGMI 185 (332)
T ss_pred Eeccce
Confidence 776653
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.80 E-value=4.1e-19 Score=154.70 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=75.0
Q ss_pred CeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHHHHHHHHHHHHHhcC---C-CceEEEEe
Q psy17147 5 RPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-MWNQVLFFGSLVMKMSQNH---P-EGIHLIGY 78 (291)
Q Consensus 5 ~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~~~~~~~i~~~~~~~---~-~~~~lvGh 78 (291)
|.||++||+++.. ..|..+++.|.++ ||.|+++|+||+|.|... ...........+.+.+... . +++.++||
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~--Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPR--GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhC--CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 3445555655543 5788889999887 999999999999998532 1122333334454445444 4 78999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
||||.+++.+|...|++ ++++|+++++..
T Consensus 273 S~GG~~Al~~A~~~p~r-i~a~V~~~~~~~ 301 (414)
T PRK05077 273 RFGANVAVRLAYLEPPR-LKAVACLGPVVH 301 (414)
T ss_pred ChHHHHHHHHHHhCCcC-ceEEEEECCccc
Confidence 99999999999999986 999999987753
No 54
>PRK10566 esterase; Provisional
Probab=99.76 E-value=1.9e-18 Score=141.60 Aligned_cols=95 Identities=23% Similarity=0.353 Sum_probs=73.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-----H-------HHHHHHHHHHHHHHHhc--C
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-----M-------WNQVLFFGSLVMKMSQN--H 69 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-----~-------~~~~~~~~~~i~~~~~~--~ 69 (291)
.|.||++||++++...|..++..|+++ ||.|+++|+||||.+... . ...++++...+..+.+. .
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQA--GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhC--CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999886 999999999999975211 0 12345555555555544 2
Q ss_pred C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEE
Q psy17147 70 P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFIS 102 (291)
Q Consensus 70 ~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~ 102 (291)
. +++.++||||||.+++.++.++|+ +.+.+.
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~ 136 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPW--VKCVAS 136 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCC--eeEEEE
Confidence 3 789999999999999999998886 444433
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.75 E-value=6.1e-18 Score=140.24 Aligned_cols=101 Identities=13% Similarity=-0.007 Sum_probs=76.2
Q ss_pred CCeEEEEcCCCC----ChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHHHHHHHhcC-C-CceE
Q psy17147 4 YRPVLVIHGILS----GNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSLVMKMSQNH-P-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~----~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~i~~~~~~~-~-~~~~ 74 (291)
+++||++||.++ +...|..+++.|+++ ||+|+++|++|||.|... .....+++.+.+..+.++. + ++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~--G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~ 103 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEA--GFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIV 103 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHC--CCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 567888888663 345677888999886 999999999999998543 1223455566666555554 4 7799
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
++||||||.+++.++... .. |+++|+++++..
T Consensus 104 l~G~S~Gg~~a~~~a~~~-~~-v~~lil~~p~~~ 135 (274)
T TIGR03100 104 AWGLCDAASAALLYAPAD-LR-VAGLVLLNPWVR 135 (274)
T ss_pred EEEECHHHHHHHHHhhhC-CC-ccEEEEECCccC
Confidence 999999999999998754 44 999999987643
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.75 E-value=5.6e-18 Score=149.94 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCCCChhHHH-----HHHHHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHHHHHHHhcCC-Cce
Q psy17147 3 RYRPVLVIHGILSGNKTLE-----KFKERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSLVMKMSQNHP-EGI 73 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~-----~~~~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~i~~~~~~~~-~~~ 73 (291)
..+|||++||+......|+ +++++|.+. ||+|+++|++|+|.+... ..+..+.+.+++..+++..+ +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q--Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ--GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQV 264 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHC--CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCe
Confidence 3689999999998887775 899999987 999999999999988432 24555678888888888888 899
Q ss_pred EEEEeChHHHHHH----HHHHhC-CCCCcceEEEecCCCCCc
Q psy17147 74 HLIGYSQGGLIAR----GILEQF-PNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 74 ~lvGhS~GG~ia~----~~a~~~-p~~~v~~li~~~~~~~~~ 110 (291)
+++||||||.++. .++... +++ |+++++++++...+
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~r-v~slvll~t~~Df~ 305 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKR-IKSATFFTTLLDFS 305 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCc-cceEEEEecCcCCC
Confidence 9999999999852 345555 665 99999998886543
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.75 E-value=1.3e-18 Score=149.84 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCCChhH-------------HHHHHH---HHHHhCCCcEEEEecCCCCCCCcc------------------
Q psy17147 4 YRPVLVIHGILSGNKT-------------LEKFKE---RIERFHPGTKVVIPDNYSNWASLE------------------ 49 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~-------------~~~~~~---~L~~~~~g~~v~~~D~~G~g~S~~------------------ 49 (291)
...||++|+++++++. |+.++. .|.- ..|.||++|..|.+.|..
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt--~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDT--NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCC--CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 3578899999997532 665543 1222 268999999998654210
Q ss_pred ----hHHHHHHHHHHHHHHHHhcCC-CceE-EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 50 ----PMWNQVLFFGSLVMKMSQNHP-EGIH-LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 50 ----~~~~~~~~~~~~i~~~~~~~~-~~~~-lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
....+++++++++..++++++ ++++ +|||||||++++.+|.++|++ |+++|++++...
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~-v~~lv~ia~~~~ 197 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHM-VERMIGVIGNPQ 197 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHh-hheEEEEecCCC
Confidence 114689999999999999999 8886 999999999999999999997 999999966543
No 58
>PRK13604 luxD acyl transferase; Provisional
Probab=99.74 E-value=6.7e-17 Score=132.68 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=74.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCC-CCCcchH-----HHHHHHHHHHHHHHHhcCCCceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSN-WASLEPM-----WNQVLFFGSLVMKMSQNHPEGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~-g~S~~~~-----~~~~~~~~~~i~~~~~~~~~~~~lvG 77 (291)
.+.||++||+++....+..++++|.++ ||.|+.+|+||+ |.|.... ....+|+...+..+.++...++.|+|
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~--G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG 114 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSN--GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIA 114 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHC--CCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEE
Confidence 367899999999987899999999997 999999999987 8884322 23345555555554443338899999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||||.++...|... +++.+|+.++..
T Consensus 115 ~SmGgava~~~A~~~---~v~~lI~~sp~~ 141 (307)
T PRK13604 115 ASLSARIAYEVINEI---DLSFLITAVGVV 141 (307)
T ss_pred ECHHHHHHHHHhcCC---CCCEEEEcCCcc
Confidence 999999987766633 277777775543
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.73 E-value=6.8e-18 Score=144.94 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCCChhH-----HHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-CceE
Q psy17147 4 YRPVLVIHGILSGNKT-----LEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~-----~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~~ 74 (291)
++|||++||+..+... ++++++.|.++ ||+|+++|++|+|.|.... .+..+++.+.+..+++..+ ++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~--G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~ 139 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLER--GQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQIS 139 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHC--CCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 5689999998765544 46899999987 9999999999999874322 2222446666777777777 8999
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
++||||||.+++.++..+|+. |+++|++++|...
T Consensus 140 lvGhS~GG~i~~~~~~~~~~~-v~~lv~~~~p~~~ 173 (350)
T TIGR01836 140 LLGICQGGTFSLCYAALYPDK-IKNLVTMVTPVDF 173 (350)
T ss_pred EEEECHHHHHHHHHHHhCchh-eeeEEEecccccc
Confidence 999999999999999999986 9999999888754
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.73 E-value=1.2e-16 Score=119.69 Aligned_cols=92 Identities=24% Similarity=0.214 Sum_probs=74.7
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLI 84 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~i 84 (291)
+||++||++++...|..+++.|.+. ||.|+.+|+|+++.+.... ..+++.+++.. .... +++.++|||+||.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~i~l~G~S~Gg~~ 74 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ--GYAVVAFDYPGHGDSDGAD--AVERVLADIRA--GYPDPDRIILIGHSMGGAI 74 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT--TEEEEEESCTTSTTSHHSH--HHHHHHHHHHH--HHCTCCEEEEEEETHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC--CCEEEEEecCCCCccchhH--HHHHHHHHHHh--hcCCCCcEEEEEEccCcHH
Confidence 6899999999999999999999997 9999999999999983222 34444444431 1125 89999999999999
Q ss_pred HHHHHHhCCCCCcceEEEecC
Q psy17147 85 ARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 85 a~~~a~~~p~~~v~~li~~~~ 105 (291)
++.++.+. .+ ++++|++++
T Consensus 75 a~~~~~~~-~~-v~~~v~~~~ 93 (145)
T PF12695_consen 75 AANLAARN-PR-VKAVVLLSP 93 (145)
T ss_dssp HHHHHHHS-TT-ESEEEEESE
T ss_pred HHHHhhhc-cc-eeEEEEecC
Confidence 99999988 43 999999855
No 61
>KOG2564|consensus
Probab=99.73 E-value=2.3e-17 Score=129.85 Aligned_cols=101 Identities=15% Similarity=0.096 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc--chHHHHHHHHHHHHHHHHhcC----CCceEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL--EPMWNQVLFFGSLVMKMSQNH----PEGIHLI 76 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~--~~~~~~~~~~~~~i~~~~~~~----~~~~~lv 76 (291)
.+|-++++||.+.|+-.|..++..|..+. ..+|+++|+||||.+. ....-+.+.++.|+-++++++ ..+++||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~-~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKI-RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhc-ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 57778999999999999999999998865 7789999999999994 344556677777777666654 3789999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEec
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLS 104 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~ 104 (291)
||||||.+|.+.|..---.++.+++++.
T Consensus 152 GHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred eccccchhhhhhhhhhhchhhhceEEEE
Confidence 9999999999888753222388888874
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=9.5e-17 Score=130.92 Aligned_cols=103 Identities=13% Similarity=0.068 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCCC----hhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHHHHHHHHHHHH---HHhcCC-CceE
Q psy17147 4 YRPVLVIHGILSG----NKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-WNQVLFFGSLVMK---MSQNHP-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~----~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-~~~~~~~~~~i~~---~~~~~~-~~~~ 74 (291)
.++||++||++++ ...|..+++.|.+. ||+|+++|+||||.|.... ..+++.+.+++.. ++++.+ .+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~--Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAG--GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 3568999999874 35778889999876 9999999999999995322 2233344444333 344556 8999
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
++||||||.+++.++.++|+. +.++|++++...|
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~-v~~lVL~~P~~~g 136 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAK-CNRLVLWQPVVSG 136 (266)
T ss_pred EEEECHHHHHHHHHHHhCccc-cceEEEeccccch
Confidence 999999999999999999986 9999999876654
No 63
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.71 E-value=2.3e-17 Score=133.75 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch--H---HHHHHHHHHHHHHHHhcCC-CceEE
Q psy17147 4 YRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEP--M---WNQVLFFGSLVMKMSQNHP-EGIHL 75 (291)
Q Consensus 4 ~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~---~~~~~~~~~~i~~~~~~~~-~~~~l 75 (291)
.|.||++||+.|++ ...+.+++.+.++ |+.|+++++|||+.+... . ....+|++..+..+....+ .++..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~r--g~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRR--GWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhc--CCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 46789999999986 5777889999987 999999999999998432 1 2234677777777666566 99999
Q ss_pred EEeChHH-HHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 76 IGYSQGG-LIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 76 vGhS~GG-~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
||.|+|| +++.+++++..+.++.+.+.++.|..-
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 9999999 777777777766668888888777643
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.71 E-value=2.1e-16 Score=129.08 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=82.1
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGL 83 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ 83 (291)
++++++||++++...|......+......|+++++|+||||.|. .........++++..++++++ .+++++||||||.
T Consensus 22 ~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 100 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGA 100 (282)
T ss_pred CeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cccccHHHHHHHHHHHHHHhCCCceEEEEecccHH
Confidence 48999999999999998854444443212899999999999996 111223334888899999998 7899999999999
Q ss_pred HHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 84 IARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 84 ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+++.++.++|+. ++++++++++..
T Consensus 101 ~~~~~~~~~p~~-~~~~v~~~~~~~ 124 (282)
T COG0596 101 VALALALRHPDR-VRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHhcchh-hheeeEecCCCC
Confidence 999999999996 999999976643
No 65
>KOG2984|consensus
Probab=99.70 E-value=7.6e-18 Score=126.32 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=140.4
Q ss_pred CCeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH----HHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM----WNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~----~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
...|++++|..|+. ..|.++...|.... -+.++++|.||+|.|.+|. ......-+++-..+++.+. +++.++|
T Consensus 42 ~~~iLlipGalGs~~tDf~pql~~l~k~l-~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlG 120 (277)
T KOG2984|consen 42 PNYILLIPGALGSYKTDFPPQLLSLFKPL-QVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLG 120 (277)
T ss_pred CceeEecccccccccccCCHHHHhcCCCC-ceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEee
Confidence 45689999998886 58888877776543 3799999999999996554 3344555667777888999 9999999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecCCCCCccCccccccccccchhhhcc-cchhhhhcccccccccccCceeEeecC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQFGHFTEDESVVELR-DTKMYTENSLGLRTLDKQGKLVLISVP 156 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
||=||..|+..|.++++. |.++|++++...-..... ....... ...|....+..+..
T Consensus 121 WSdGgiTalivAak~~e~-v~rmiiwga~ayvn~~~~--------ma~kgiRdv~kWs~r~R~P~e~------------- 178 (277)
T KOG2984|consen 121 WSDGGITALIVAAKGKEK-VNRMIIWGAAAYVNHLGA--------MAFKGIRDVNKWSARGRQPYED------------- 178 (277)
T ss_pred ecCCCeEEEEeeccChhh-hhhheeecccceecchhH--------HHHhchHHHhhhhhhhcchHHH-------------
Confidence 999999999999999996 999999976542111000 0000000 00011000000000
Q ss_pred CCccccccCCCccccccccchhccCccchhhhccCCCCCc--hhhhcccccccceEEEeeCCCceeccCccCcccccCCC
Q psy17147 157 GVDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNS--NLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTED 234 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~ 234 (291)
.+ .++......+.+. +.+.......+. -+......++|++ +++|+.|+++......
T Consensus 179 ------~Y-g~e~f~~~wa~wv------D~v~qf~~~~dG~fCr~~lp~vkcPtl-i~hG~kDp~~~~~hv~-------- 236 (277)
T KOG2984|consen 179 ------HY-GPETFRTQWAAWV------DVVDQFHSFCDGRFCRLVLPQVKCPTL-IMHGGKDPFCGDPHVC-------- 236 (277)
T ss_pred ------hc-CHHHHHHHHHHHH------HHHHHHhhcCCCchHhhhcccccCCee-EeeCCcCCCCCCCCcc--------
Confidence 00 0000001111111 111111101110 0112223789999 9999999988766653
Q ss_pred ceEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 235 ESVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
.+.... .+++.+.|..+|..++.-+++|++.+.+||.
T Consensus 237 --------------------fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 237 --------------------FIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLK 274 (277)
T ss_pred --------------------chhhhcccceEEEccCCCcceeeechHHHHHHHHHHHh
Confidence 333333 7899999999999999999999999999984
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=3.3e-17 Score=127.72 Aligned_cols=220 Identities=14% Similarity=0.150 Sum_probs=140.1
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchHHHHHHHHHHHHHHHHh-cCC-CceEEEEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS-LEPMWNQVLFFGSLVMKMSQ-NHP-EGIHLIGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S-~~~~~~~~~~~~~~i~~~~~-~~~-~~~~lvGhS 79 (291)
.+..++++|=.||++..|+.+...|.. .+.++++++||.|.. ..+...+++.+++.|..-+. -.. +++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~---~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPA---DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCc---hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 366799999999999999999888865 369999999999887 46667888999998887777 344 899999999
Q ss_pred hHHHHHHHHHHhCCC--CCcceEEEecCCCCCccCccccccccccchhhhcccchhhhhcccccccccccCceeEeecCC
Q psy17147 80 QGGLIARGILEQFPN--HNVRNFISLSSPHGGQYGSNQFGHFTEDESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPG 157 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~--~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
|||++|.++|.+... ..+.++.+.++......... .+. ......+... +..+ ...+.
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~-~i~--------~~~D~~~l~~----l~~l--------gG~p~ 141 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGK-QIH--------HLDDADFLAD----LVDL--------GGTPP 141 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccC-Ccc--------CCCHHHHHHH----HHHh--------CCCCh
Confidence 999999999987543 23778888876655322111 111 1111111111 1111 11111
Q ss_pred CccccccCCCccccccccchhccCccchhhhccCCCCCchhhh-cccccccceEEEeeCCCceeccCccCcccccCCCce
Q psy17147 158 VDHFQWHNNPTVIDQHKSTFVCFSKFLPFINNLNATPNSNLFK-LGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTEDES 236 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~ 236 (291)
.++.++++.+. +++.+++.........+. ..-+++|+. +++|++|..++-....
T Consensus 142 ----e~led~El~~l----------~LPilRAD~~~~e~Y~~~~~~pl~~pi~-~~~G~~D~~vs~~~~~---------- 196 (244)
T COG3208 142 ----ELLEDPELMAL----------FLPILRADFRALESYRYPPPAPLACPIH-AFGGEKDHEVSRDELG---------- 196 (244)
T ss_pred ----HHhcCHHHHHH----------HHHHHHHHHHHhcccccCCCCCcCcceE-EeccCcchhccHHHHH----------
Confidence 24455432222 223332211111111111 123678988 8888888877655442
Q ss_pred EEecccccccccccchhhhhhh--cCCEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 237 VVELRDTKMYTKNSLGLRTLDK--QGKLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
...+ ....+++.++| ||+...++.+++.+.|.+.+
T Consensus 197 ------------------~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l 233 (244)
T COG3208 197 ------------------AWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHL 233 (244)
T ss_pred ------------------HHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHh
Confidence 2222 23789999999 99999999988888776654
No 67
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.69 E-value=3.3e-19 Score=143.79 Aligned_cols=72 Identities=22% Similarity=0.271 Sum_probs=66.2
Q ss_pred cEEEEecCCCCCCCcc---h--HHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 34 TKVVIPDNYSNWASLE---P--MWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 34 ~~v~~~D~~G~g~S~~---~--~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
|+|+++|+||+|.|.. . ..++.+++++++..++++++ ++++++||||||.+++.++.++|++ |+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~-v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPER-VKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGG-EEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchh-hcCcEEEeee
Confidence 6999999999999985 2 26778999999999999999 8899999999999999999999996 9999999876
No 68
>KOG1838|consensus
Probab=99.65 E-value=2.9e-15 Score=125.97 Aligned_cols=105 Identities=17% Similarity=0.241 Sum_probs=85.2
Q ss_pred CCCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCc--chH---HHHHHHHHHHHHHHHhcCC-CceE
Q psy17147 3 RYRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASL--EPM---WNQVLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~--~~~---~~~~~~~~~~i~~~~~~~~-~~~~ 74 (291)
+.|.||++||+.+++ .+.+.++..++++ ||+|++++.||+|.+. .+. ....+|+...++.+.+.++ .++.
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~--G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRK--GYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhC--CcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceE
Confidence 357899999999987 4667788777776 9999999999988873 221 4446888888888888898 8999
Q ss_pred EEEeChHHHHHHHHHHhCCC-CCcceEEEecCCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPN-HNVRNFISLSSPHGG 109 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~-~~v~~li~~~~~~~~ 109 (291)
.+|.||||.+.+.|+.+..+ .++.+.+.++.|...
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 99999999999999988766 237777778777764
No 69
>PLN02872 triacylglycerol lipase
Probab=99.64 E-value=1.2e-16 Score=137.85 Aligned_cols=101 Identities=19% Similarity=0.136 Sum_probs=72.2
Q ss_pred CCeEEEEcCCCCChhHHH------HHHHHHHHhCCCcEEEEecCCCCCCCc-------chH---HHHHHHHH-HHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLE------KFKERIERFHPGTKVVIPDNYSNWASL-------EPM---WNQVLFFG-SLVMKMS 66 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~------~~~~~L~~~~~g~~v~~~D~~G~g~S~-------~~~---~~~~~~~~-~~i~~~~ 66 (291)
+++|+|+||+.+++..|. .++..|++. ||+|+++|+||++.|. .+. ..++++++ .|+.+++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~--GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~i 151 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH--GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMI 151 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhC--CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHH
Confidence 578999999999988883 456678876 9999999999987541 111 12344444 4555544
Q ss_pred hcC----CCceEEEEeChHHHHHHHHHHhCCCC--CcceEEEecCCC
Q psy17147 67 QNH----PEGIHLIGYSQGGLIARGILEQFPNH--NVRNFISLSSPH 107 (291)
Q Consensus 67 ~~~----~~~~~lvGhS~GG~ia~~~a~~~p~~--~v~~li~~~~~~ 107 (291)
+.. ++++++|||||||.+++.++ ..|+. +|+.++++++..
T Consensus 152 d~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 152 HYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred HHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 442 48999999999999998555 56662 277888886654
No 70
>PRK11460 putative hydrolase; Provisional
Probab=99.63 E-value=8.8e-15 Score=118.14 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC-----CCCCc--------chH----HHHHHHHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS-----NWASL--------EPM----WNQVLFFGSLVMKM 65 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G-----~g~S~--------~~~----~~~~~~~~~~i~~~ 65 (291)
..+.||++||++++...|..+.+.|....+.+.++.++-+. .|.+. ... ....+.+.+.+..+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999998764445666555431 12111 011 12223344445554
Q ss_pred HhcCC---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 66 SQNHP---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 66 ~~~~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
.++.+ ++++++|||+||.+++.++.++|+. +.+++.+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~-~~~vv~~ 134 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGL-AGRVIAF 134 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc-ceEEEEe
Confidence 44543 6899999999999999999988875 6666655
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.62 E-value=6.4e-15 Score=127.15 Aligned_cols=105 Identities=21% Similarity=0.278 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCCCh--hHHHH-HHHHHHHhCCCcEEEEecCCCCCCCcchH-HHHHHHHHHHHHHHHh----cC--C-C
Q psy17147 3 RYRPVLVIHGILSGN--KTLEK-FKERIERFHPGTKVVIPDNYSNWASLEPM-WNQVLFFGSLVMKMSQ----NH--P-E 71 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~-~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-~~~~~~~~~~i~~~~~----~~--~-~ 71 (291)
++|++|++||++++. ..|.. +++.|....+.++|+++|++|+|.+..+. ......+++++.++++ .+ + +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764 45765 55555432236899999999999885332 2223344444444433 22 4 8
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+++||||||||.+|..++.+.|++ |.+++++++...
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~r-V~rItgLDPAgP 155 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHK-VNRITGLDPAGP 155 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcc-eeEEEEEcCCCC
Confidence 999999999999999999999987 999999977543
No 72
>PLN00021 chlorophyllase
Probab=99.60 E-value=8.9e-14 Score=116.54 Aligned_cols=100 Identities=20% Similarity=0.184 Sum_probs=72.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcc-hHHHHHHHHHHHHHHHHhc-------CC-CceE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLE-PMWNQVLFFGSLVMKMSQN-------HP-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~-~~~~~~~~~~~~i~~~~~~-------~~-~~~~ 74 (291)
.|+||++||++.+...|..+++.|+++ ||.|+++|++|.+.+.. .......++.+.+.+.++. .. ++++
T Consensus 52 ~PvVv~lHG~~~~~~~y~~l~~~Las~--G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~ 129 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYSQLLQHIASH--GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLA 129 (313)
T ss_pred CCEEEEECCCCCCcccHHHHHHHHHhC--CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheE
Confidence 578999999999999999999999987 99999999998654321 1112223333333322211 23 7899
Q ss_pred EEEeChHHHHHHHHHHhCCCC----CcceEEEecC
Q psy17147 75 LIGYSQGGLIARGILEQFPNH----NVRNFISLSS 105 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~----~v~~li~~~~ 105 (291)
++||||||.+++.++.++++. +++++|++++
T Consensus 130 l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 130 LAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred EEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 999999999999999988752 2677777744
No 73
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.59 E-value=2.2e-15 Score=145.27 Aligned_cols=102 Identities=17% Similarity=0.214 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCCCChhHHHHH-----HHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhc---CC-
Q psy17147 3 RYRPVLVIHGILSGNKTLEKF-----KERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQN---HP- 70 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~-----~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~---~~- 70 (291)
.++||||+||+..+...|+.. ++.|.+. ||+|+++|+ |.+..+. ..++.+++..+.+.++. ..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~--g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRA--GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHC--CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 468999999999999999865 7889886 899999995 4443221 23444444444444433 33
Q ss_pred CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
++++++||||||.+++.++..+++.+|+++|++++|...
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 789999999999999999876554239999999888653
No 74
>KOG4667|consensus
Probab=99.59 E-value=3.5e-14 Score=107.88 Aligned_cols=101 Identities=18% Similarity=0.151 Sum_probs=75.9
Q ss_pred CCCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-HHHHHHHHHHHHHhcCC----CceEE
Q psy17147 3 RYRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWN-QVLFFGSLVMKMSQNHP----EGIHL 75 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~-~~~~~~~~i~~~~~~~~----~~~~l 75 (291)
+...+|++||+-.+. ..+..++.+|++. |+.++.+|++|.|.|.....+ .....++|+..+++.+. .--++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~--gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKE--GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhc--CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 456789999999986 5777889999987 999999999999999543311 11222355555555554 23468
Q ss_pred EEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 76 IGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+|||-||.+++.++.++.+ +..+|-+++..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRy 139 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD--IRNVINCSGRY 139 (269)
T ss_pred EeecCccHHHHHHHHhhcC--chheEEccccc
Confidence 9999999999999999997 77788775544
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.55 E-value=1.9e-13 Score=113.42 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=72.7
Q ss_pred CCeEEEEcCCCCChhHHHHH--HHHHHHhCCCcEEEEecC--CCCCCCcc-------------------h--HHHH-HHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKF--KERIERFHPGTKVVIPDN--YSNWASLE-------------------P--MWNQ-VLF 57 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~--~~~L~~~~~g~~v~~~D~--~G~g~S~~-------------------~--~~~~-~~~ 57 (291)
.|.|+++||++++...|... ...+.... |+.|+++|. +|+|.+.. + ..+. ...
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~-g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEH-GLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhc-CcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 57789999999998888542 34555433 899999998 55543210 0 0112 234
Q ss_pred HHHHHHHHHhc---CC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 58 FGSLVMKMSQN---HP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 58 ~~~~i~~~~~~---~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+.+++..++++ +. +++.++||||||.+++.++.++|+. +.+++++++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~ 172 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR-FKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc-ceEEEEECCc
Confidence 45666666665 33 7899999999999999999999997 9999888654
No 76
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.55 E-value=6e-14 Score=115.92 Aligned_cols=105 Identities=17% Similarity=0.150 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCCCCh-hHHHH-HHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHH----HHHHHHHHHHHhc--CC-Cc
Q psy17147 3 RYRPVLVIHGILSGN-KTLEK-FKERIERFHPGTKVVIPDNYSNWASLEP-MWNQV----LFFGSLVMKMSQN--HP-EG 72 (291)
Q Consensus 3 ~~~~vvllHG~~~~~-~~~~~-~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~----~~~~~~i~~~~~~--~~-~~ 72 (291)
++|++|++||++++. ..|.. +.+.+... .+++|+++|+++++.+..+ ...++ +++++.+..+.+. .+ ++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~-~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSR-GDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhc-CCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 478899999999987 67754 44444432 2799999999988544322 22233 3445555555554 34 78
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
+++|||||||.+|..++.++|++ |.+++++++....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~-v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGK-LGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCc-cceeEEecCCccc
Confidence 99999999999999999999986 9999999776543
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=99.53 E-value=3.9e-13 Score=111.86 Aligned_cols=101 Identities=14% Similarity=0.107 Sum_probs=73.4
Q ss_pred CCeEEEEcCCCCChhHHHH---HHHHHHHhCCCcEEEEecCCCCCC---------------C-----c-------chHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEK---FKERIERFHPGTKVVIPDNYSNWA---------------S-----L-------EPMWN 53 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~---~~~~L~~~~~g~~v~~~D~~G~g~---------------S-----~-------~~~~~ 53 (291)
.|.|+++||++++...|.. +.+.+... |+.|+.+|..++|. + . .-...
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~--g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAAR--GIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhc--CeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 5778999999998877754 33455544 99999999876551 1 0 00122
Q ss_pred HHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 54 QVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 54 ~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
..+++...+....+.+. ++++++||||||.+|+.++.++|+. +.+++.+++..
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~~ 178 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK-YKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh-EEEEEEECCcc
Confidence 34556666666555556 8899999999999999999999997 99988886653
No 78
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.52 E-value=2.4e-13 Score=108.71 Aligned_cols=109 Identities=25% Similarity=0.374 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHh------CCCcEEEEecCCCCCCCc--chHHHHHHHHHHHHHHHHhcC-----
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERF------HPGTKVVIPDNYSNWASL--EPMWNQVLFFGSLVMKMSQNH----- 69 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~------~~g~~v~~~D~~G~g~S~--~~~~~~~~~~~~~i~~~~~~~----- 69 (291)
++.||||+||.+|+...|+.+...+.+. ...++++++|+....... .......+.+.+.++.+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 5789999999999999999887766321 125789999987654332 222334455555666665555
Q ss_pred C-CceEEEEeChHHHHHHHHHHhCCC--CCcceEEEecCCCCCcc
Q psy17147 70 P-EGIHLIGYSQGGLIARGILEQFPN--HNVRNFISLSSPHGGQY 111 (291)
Q Consensus 70 ~-~~~~lvGhS~GG~ia~~~a~~~p~--~~v~~li~~~~~~~~~~ 111 (291)
+ ++++||||||||.+|..++...+. ..|..+|.+++|+.+..
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 3 899999999999999999876542 23999999999998864
No 79
>KOG1552|consensus
Probab=99.50 E-value=4.1e-13 Score=105.72 Aligned_cols=101 Identities=17% Similarity=0.100 Sum_probs=78.8
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC--CceEEEEeC
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP--EGIHLIGYS 79 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~--~~~~lvGhS 79 (291)
.+.|+++||...+...+-.+...|..+. +++++.+|++|+|.|.... ....+|+....+.+.+..+ ++++++|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~l-n~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFL-NCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcc-cceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 4779999999888776666666676654 8899999999999995332 3334555566666666774 899999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+|...++.+|.+.| +.++|+.++-..
T Consensus 139 iGt~~tv~Lasr~~---~~alVL~SPf~S 164 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP---LAAVVLHSPFTS 164 (258)
T ss_pred CCchhhhhHhhcCC---cceEEEeccchh
Confidence 99999999999998 788888866443
No 80
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.49 E-value=6.1e-14 Score=112.09 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhCCCcEEEEecCCCCCCCcc---------hHHHHHHHHHHHHHHHHhcCC---CceEEEEeChHHHHHHH
Q psy17147 20 LEKFKERIERFHPGTKVVIPDNYSNWASLE---------PMWNQVLFFGSLVMKMSQNHP---EGIHLIGYSQGGLIARG 87 (291)
Q Consensus 20 ~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~---------~~~~~~~~~~~~i~~~~~~~~---~~~~lvGhS~GG~ia~~ 87 (291)
|....+.|+++ ||.|+.+|+||.+.... .....++|+.+.++.++++.. +++.++|||+||.+++.
T Consensus 3 f~~~~~~la~~--Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 3 FNWNAQLLASQ--GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp -SHHHHHHHTT--T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred eeHHHHHHHhC--CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 44566778776 99999999999775311 114567888888888877754 89999999999999999
Q ss_pred HHHhCCCCCcceEEEecCCC
Q psy17147 88 ILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 88 ~a~~~p~~~v~~li~~~~~~ 107 (291)
++.++|++ +++++..++..
T Consensus 81 ~~~~~~~~-f~a~v~~~g~~ 99 (213)
T PF00326_consen 81 AATQHPDR-FKAAVAGAGVS 99 (213)
T ss_dssp HHHHTCCG-SSEEEEESE-S
T ss_pred hhccccee-eeeeeccceec
Confidence 99999997 88888876554
No 81
>KOG4391|consensus
Probab=99.45 E-value=3.1e-14 Score=108.29 Aligned_cols=101 Identities=14% Similarity=0.030 Sum_probs=73.6
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHHHHHHHHHH-HHHHh--cCC-CceEEEE
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-WNQVLFFGSLV-MKMSQ--NHP-EGIHLIG 77 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-~~~~~~~~~~i-~~~~~--~~~-~~~~lvG 77 (291)
+.|+++.+|+..|+....-..+.-+-.+. +.+|+.+++||+|.|.... ...+.--++.+ ..+.. .+. .++++.|
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l-~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfG 155 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNL-KMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFG 155 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHc-CceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEe
Confidence 67899999999999876666666554444 8899999999999996432 22222222222 22222 223 7899999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
-|+||.+|.++|++..++ +.++|+-++
T Consensus 156 rSlGGAvai~lask~~~r-i~~~ivENT 182 (300)
T KOG4391|consen 156 RSLGGAVAIHLASKNSDR-ISAIIVENT 182 (300)
T ss_pred cccCCeeEEEeeccchhh-eeeeeeech
Confidence 999999999999999997 988887644
No 82
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.45 E-value=1.5e-13 Score=109.53 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=88.7
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC--CceEEEEeChH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP--EGIHLIGYSQG 81 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~--~~~~lvGhS~G 81 (291)
+||=+||-+||-..++.+.+.|.+. |+|+|.+++||+|.+..+. .++-.+-...+.+++++++ +++.++|||.|
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~--~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrG 114 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEA--GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRG 114 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHc--CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccc
Confidence 5788999999999999999999997 9999999999999986443 5666788888999999998 88999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEecCCCCCcc
Q psy17147 82 GLIARGILEQFPNHNVRNFISLSSPHGGQY 111 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~~~~~~~~~ 111 (291)
|-.|+.++..+| +.++++++++.....
T Consensus 115 cenal~la~~~~---~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 115 CENALQLAVTHP---LHGLVLINPPGLRPH 141 (297)
T ss_pred hHHHHHHHhcCc---cceEEEecCCccccc
Confidence 999999999995 679999988765433
No 83
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.45 E-value=8e-13 Score=100.95 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=59.2
Q ss_pred EEEEcCCCCCh-hHHHHHH-HHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHH
Q psy17147 7 VLVIHGILSGN-KTLEKFK-ERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLI 84 (291)
Q Consensus 7 vvllHG~~~~~-~~~~~~~-~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~i 84 (291)
|+++||++++. ..|.... +.|.. -++|...++. ..+.++..+.+.+.+....++++|||||+|+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~---~~~V~~~~~~---------~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLEN---SVRVEQPDWD---------NPDLDEWVQALDQAIDAIDEPTILVAHSLGCLT 68 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTT---SEEEEEC--T---------S--HHHHHHHHHHCCHC-TTTEEEEEETHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCC---CeEEeccccC---------CCCHHHHHHHHHHHHhhcCCCeEEEEeCHHHHH
Confidence 68999999996 5666544 34443 2577777661 235667777777766666688999999999999
Q ss_pred HHHHH-HhCCCCCcceEEEecCCC
Q psy17147 85 ARGIL-EQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 85 a~~~a-~~~p~~~v~~li~~~~~~ 107 (291)
+++++ ...+. +|.++++++++.
T Consensus 69 ~l~~l~~~~~~-~v~g~lLVAp~~ 91 (171)
T PF06821_consen 69 ALRWLAEQSQK-KVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHTCCS-SEEEEEEES--S
T ss_pred HHHHHhhcccc-cccEEEEEcCCC
Confidence 99999 44555 599999998764
No 84
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.40 E-value=6.2e-13 Score=121.99 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=72.8
Q ss_pred CCeEEEEcCCCCChh--HHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchH------HHHHHHHHHHHHHHHhcCC--
Q psy17147 4 YRPVLVIHGILSGNK--TLEKFKERIERFHPGTKVVIPDNYSNWA---SLEPM------WNQVLFFGSLVMKMSQNHP-- 70 (291)
Q Consensus 4 ~~~vvllHG~~~~~~--~~~~~~~~L~~~~~g~~v~~~D~~G~g~---S~~~~------~~~~~~~~~~i~~~~~~~~-- 70 (291)
.|.||++||-+.... .+....+.|... ||.|+.+++||.+. ..... ....+|+.+.++ ++.+.+
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~~--G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~ 470 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLASA--GYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLV 470 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhcC--CeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCc
Confidence 477899999876543 466777888886 99999999998433 22111 234677777777 455555
Q ss_pred --CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 71 --EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 71 --~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+++.+.|||+||++++..+.+.| . +++.+...+.
T Consensus 471 d~~ri~i~G~SyGGymtl~~~~~~~-~-f~a~~~~~~~ 506 (620)
T COG1506 471 DPERIGITGGSYGGYMTLLAATKTP-R-FKAAVAVAGG 506 (620)
T ss_pred ChHHeEEeccChHHHHHHHHHhcCc-h-hheEEeccCc
Confidence 58999999999999999999988 3 7777766443
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.39 E-value=3.8e-12 Score=101.57 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=71.5
Q ss_pred CCeEEEEcCCCCChhHHH---HHHHHHHHhCCCcEEEEecCCCCCCCcc------h-----HHHHHHHHHHHHHHHHhcC
Q psy17147 4 YRPVLVIHGILSGNKTLE---KFKERIERFHPGTKVVIPDNYSNWASLE------P-----MWNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~---~~~~~L~~~~~g~~v~~~D~~G~g~S~~------~-----~~~~~~~~~~~i~~~~~~~ 69 (291)
.|.||++||.+++...|. .+.+.+.+. ||.|+++|++|++.+.. + ......++.+.+..+..+.
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~--g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWGWKAAADRY--GFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcChHHHHHhC--CeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 567899999999887765 344444443 99999999999764311 0 0112233334444444444
Q ss_pred C---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 70 P---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 70 ~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+ ++++|+||||||.+++.++.++|+. +.+++.++++.
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~g~~ 130 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDV-FAGGASNAGLP 130 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchh-heEEEeecCCc
Confidence 3 6899999999999999999999997 88888886654
No 86
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.39 E-value=3.4e-12 Score=112.45 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCCChhHH-----HHHHHHHHHhCCCcEEEEecCCCCCCCcch--HHHHHHHHHHHHHHHHhcCC-CceEE
Q psy17147 4 YRPVLVIHGILSGNKTL-----EKFKERIERFHPGTKVVIPDNYSNWASLEP--MWNQVLFFGSLVMKMSQNHP-EGIHL 75 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~--~~~~~~~~~~~i~~~~~~~~-~~~~l 75 (291)
.+|||+++.+-.-...| ++++++|.+. |++|+++|+++-+.+... ..+-++.+.+.|+.+.+..+ +++++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q--G~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl 292 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN--QLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNL 292 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHc--CCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeE
Confidence 57999999998766556 5899999997 999999999987666432 23334566666777666777 89999
Q ss_pred EEeChHHHHHHH----HHHhCCCCCcceEEEecCCCCCc
Q psy17147 76 IGYSQGGLIARG----ILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 76 vGhS~GG~ia~~----~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
+||||||.++.. +++++++.+|+++++++++....
T Consensus 293 ~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 293 LGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred EEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999886 77888863499999999988754
No 87
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.35 E-value=4.8e-12 Score=102.31 Aligned_cols=109 Identities=18% Similarity=0.313 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHH-HhCCCcEEEEec--CCCC----CC----Ccc-------------hHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIE-RFHPGTKVVIPD--NYSN----WA----SLE-------------PMWNQVLFF 58 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~-~~~~g~~v~~~D--~~G~----g~----S~~-------------~~~~~~~~~ 58 (291)
+..|.||+||++++...+..++.++. +....-.++.++ --|+ |. ... .......-+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 46799999999999999999999998 542222444332 2221 11 111 112233445
Q ss_pred HHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC---C-CcceEEEecCCCCCcc
Q psy17147 59 GSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN---H-NVRNFISLSSPHGGQY 111 (291)
Q Consensus 59 ~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~---~-~v~~li~~~~~~~~~~ 111 (291)
...+..+.++++ +++.+|||||||+.++.++..+.. . ++.++|.+++|..|..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 555555566677 999999999999999999988643 2 4899999999998854
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.35 E-value=8.3e-12 Score=99.90 Aligned_cols=102 Identities=19% Similarity=0.169 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC------CCC---C--------cc--hHHHHHHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS------NWA---S--------LE--PMWNQVLFFGSLVM 63 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G------~g~---S--------~~--~~~~~~~~~~~~i~ 63 (291)
..+.||++||+|.+...|....... ...+..+++.++-+- .|. + .. .....+++.++.+.
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~-~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELN-LALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHH-TCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhc-ccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 4567899999999997777665522 224577888775431 222 1 11 12334444444444
Q ss_pred HHHh----c-CC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 64 KMSQ----N-HP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 64 ~~~~----~-~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
++++ . .. +++++.|+|+||.+++.++.++|+. +.++|++++.
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~-~~gvv~lsG~ 139 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEP-LAGVVALSGY 139 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSST-SSEEEEES--
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcC-cCEEEEeecc
Confidence 4443 2 23 8999999999999999999999996 9999999653
No 89
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=1e-12 Score=108.74 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCCChh-----------HHHHHHH---HHHHhCCCcEEEEecCCCCC-CCcc-----h---------HHHH
Q psy17147 4 YRPVLVIHGILSGNK-----------TLEKFKE---RIERFHPGTKVVIPDNYSNW-ASLE-----P---------MWNQ 54 (291)
Q Consensus 4 ~~~vvllHG~~~~~~-----------~~~~~~~---~L~~~~~g~~v~~~D~~G~g-~S~~-----~---------~~~~ 54 (291)
...|+++|++.++.. .|+.++. .+.- ..|.||+.|..|.. .|.. + ...+
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt--~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDT--ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCc--cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 346899999999752 4555432 1221 15899999998844 3311 1 2467
Q ss_pred HHHHHHHHHHHHhcCC-CceE-EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 55 VLFFGSLVMKMSQNHP-EGIH-LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 55 ~~~~~~~i~~~~~~~~-~~~~-lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
+.|+++.-+.++++++ +++. +||-||||+.|++++..||+. |++++.++++..-
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~-V~~~i~ia~~~r~ 184 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDR-VRRAIPIATAARL 184 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHH-HhhhheecccccC
Confidence 8899988899999999 7776 999999999999999999997 9999999776543
No 90
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.32 E-value=1.4e-11 Score=113.01 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=67.8
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch----------H--------------HHHHHHHHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP----------M--------------WNQVLFFGS 60 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~----------~--------------~~~~~~~~~ 60 (291)
|+|||+||++++...|..+++.|.+. ||+|+++|+||||.|... . .+.+..++.
T Consensus 450 P~VVllHG~~g~~~~~~~lA~~La~~--Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 450 PVVIYQHGITGAKENALAFAGTLAAA--GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHhC--CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 57999999999999999999999876 899999999999998221 0 124555566
Q ss_pred HHHHHHhcC----------------C-CceEEEEeChHHHHHHHHHHh
Q psy17147 61 LVMKMSQNH----------------P-EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 61 ~i~~~~~~~----------------~-~~~~lvGhS~GG~ia~~~a~~ 91 (291)
|+..+...+ + .+++++||||||.+++.++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 655544333 2 589999999999999999975
No 91
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.30 E-value=1.1e-11 Score=97.70 Aligned_cols=86 Identities=19% Similarity=0.195 Sum_probs=60.0
Q ss_pred CeEEEEcCCCC-ChhHHHHHHHHHHHhCCCcE---EEEecCCCCCCCc--ch---HHHHHHHHHHHHHHHHhcCCCceEE
Q psy17147 5 RPVLVIHGILS-GNKTLEKFKERIERFHPGTK---VVIPDNYSNWASL--EP---MWNQVLFFGSLVMKMSQNHPEGIHL 75 (291)
Q Consensus 5 ~~vvllHG~~~-~~~~~~~~~~~L~~~~~g~~---v~~~D~~G~g~S~--~~---~~~~~~~~~~~i~~~~~~~~~~~~l 75 (291)
.||||+||.++ ....|..+++.|.++ ||. ++++++-...... .. ...+..++++.|..+++..+.++.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~--GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGakVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAA--GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGAKVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHT--T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHc--CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCCEEEE
Confidence 58999999999 558999999999997 998 7999985444321 11 2344578888888888887789999
Q ss_pred EEeChHHHHHHHHHHhC
Q psy17147 76 IGYSQGGLIARGILEQF 92 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~ 92 (291)
|||||||.++++++.-.
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999999999755
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.26 E-value=3.4e-11 Score=97.24 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=76.6
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHh-cCC-CceEEEEeChHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQ-NHP-EGIHLIGYSQGG 82 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~-~~~-~~~~lvGhS~GG 82 (291)
+||+|+|+.+|+...|..+++.|... .+.|+.++.+|.+.. .+...+++++++...+.+. ..+ .++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~--~~~v~~i~~~~~~~~-~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD--VIGVYGIEYPGRGDD-EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT--EEEEEEECSTTSCTT-SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC--eEEEEEEecCCCCCC-CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 48999999999999999999999874 369999999998733 2223455555555444343 344 599999999999
Q ss_pred HHHHHHHHhCC--CCCcceEEEecCCCCC
Q psy17147 83 LIARGILEQFP--NHNVRNFISLSSPHGG 109 (291)
Q Consensus 83 ~ia~~~a~~~p--~~~v~~li~~~~~~~~ 109 (291)
.+|..+|.+.. ...|..+++++++...
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 99999997642 2239999999876544
No 93
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.23 E-value=8.6e-11 Score=93.77 Aligned_cols=111 Identities=23% Similarity=0.365 Sum_probs=74.8
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHH---hCCCcEEEEecCCC-CCCCcchHHHHHHHHHHHHHHHHhcCC---CceEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIER---FHPGTKVVIPDNYS-NWASLEPMWNQVLFFGSLVMKMSQNHP---EGIHLI 76 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~---~~~g~~v~~~D~~G-~g~S~~~~~~~~~~~~~~i~~~~~~~~---~~~~lv 76 (291)
..-|||+||+.|+...|..+.+.+.. .+++-+++..-... .+.+........+.+++.|...++... .++++|
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 44589999999999999998888877 33333332222221 223334444455677777777676665 389999
Q ss_pred EeChHHHHHHHHHHhCCCC-----------CcceEEEecCCCCCccCcc
Q psy17147 77 GYSQGGLIARGILEQFPNH-----------NVRNFISLSSPHGGQYGSN 114 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~-----------~v~~li~~~~~~~~~~~~~ 114 (291)
||||||.++..++...... .+..++.+++|+.|.....
T Consensus 84 gHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~~ 132 (217)
T PF05057_consen 84 GHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYAS 132 (217)
T ss_pred EecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcccc
Confidence 9999999998877643211 2446677899999976544
No 94
>PRK10162 acetyl esterase; Provisional
Probab=99.23 E-value=3.1e-10 Score=96.14 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=71.5
Q ss_pred CCeEEEEcCCC---CChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-HHHHHHHHHHHHHHHHhcCC---CceEEE
Q psy17147 4 YRPVLVIHGIL---SGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-MWNQVLFFGSLVMKMSQNHP---EGIHLI 76 (291)
Q Consensus 4 ~~~vvllHG~~---~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-~~~~~~~~~~~i~~~~~~~~---~~~~lv 76 (291)
.|.||++||.+ ++...|..++..|.... |+.|+.+|+|.......+ .........+.+.+..++++ ++++|+
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~-g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYS-GCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHc-CCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 46789999966 56678888999998754 899999999976544222 22333334444444444454 689999
Q ss_pred EeChHHHHHHHHHHhCC------CCCcceEEEecCC
Q psy17147 77 GYSQGGLIARGILEQFP------NHNVRNFISLSSP 106 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p------~~~v~~li~~~~~ 106 (291)
|+|+||.+++.++.... .. +.+++++.+.
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~-~~~~vl~~p~ 194 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGK-VAGVLLWYGL 194 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccC-hhheEEECCc
Confidence 99999999999987542 33 7888887554
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.23 E-value=3.1e-10 Score=87.70 Aligned_cols=87 Identities=20% Similarity=0.277 Sum_probs=65.3
Q ss_pred EEEEcCCCCChhHHH--HHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHH
Q psy17147 7 VLVIHGILSGNKTLE--KFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGL 83 (291)
Q Consensus 7 vvllHG~~~~~~~~~--~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ 83 (291)
|+.+|||.+|..+.. .+.+++++..+..++..+|++.+ .+...+.+..++++.. +.+.|||+||||+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~----------p~~a~~~l~~~i~~~~~~~~~liGSSlGG~ 71 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF----------PEEAIAQLEQLIEELKPENVVLIGSSLGGF 71 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC----------HHHHHHHHHHHHHhCCCCCeEEEEEChHHH
Confidence 789999999986554 46777887766678888887721 2344555666677776 6699999999999
Q ss_pred HHHHHHHhCCCCCcceEEEecCCC
Q psy17147 84 IARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 84 ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.|..++.+++ +.+ |++++..
T Consensus 72 ~A~~La~~~~---~~a-vLiNPav 91 (187)
T PF05728_consen 72 YATYLAERYG---LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHhC---CCE-EEEcCCC
Confidence 9999999996 334 7776654
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.22 E-value=1.2e-10 Score=87.42 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=70.6
Q ss_pred CeEEEEc-----CCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-Cce-E
Q psy17147 5 RPVLVIH-----GILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGI-H 74 (291)
Q Consensus 5 ~~vvllH-----G~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~-~ 74 (291)
+-.|++| |-.++...-..++..|.++ ||.++.+|+||-|+|.... .-.++|....+..+..+.+ .+. -
T Consensus 29 ~iAli~HPHPl~gGtm~nkvv~~la~~l~~~--G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 29 PIALICHPHPLFGGTMNNKVVQTLARALVKR--GFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCW 106 (210)
T ss_pred ceEEecCCCccccCccCCHHHHHHHHHHHhC--CceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhh
Confidence 3346666 3333445666777888887 9999999999999995443 3346777777777777777 444 6
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
+.|+|+|++|++++|.+.|+ ...++.+.+
T Consensus 107 l~GfSFGa~Ia~~la~r~~e--~~~~is~~p 135 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE--ILVFISILP 135 (210)
T ss_pred hcccchHHHHHHHHHHhccc--ccceeeccC
Confidence 89999999999999999987 444554433
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.19 E-value=1.1e-10 Score=101.62 Aligned_cols=95 Identities=14% Similarity=0.200 Sum_probs=78.1
Q ss_pred CChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---HHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHH
Q psy17147 15 SGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---WNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 15 ~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
.+...|..+++.|.+. ||.+ ..|++|+|.+.+.. ...++++.+.|+.+.++.+ ++++||||||||++++.++.
T Consensus 105 ~~~~~~~~li~~L~~~--GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW--GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHc--CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 3458999999999996 7655 88999999986532 4456777888888777777 89999999999999999999
Q ss_pred hCCCC---CcceEEEecCCCCCccC
Q psy17147 91 QFPNH---NVRNFISLSSPHGGQYG 112 (291)
Q Consensus 91 ~~p~~---~v~~li~~~~~~~~~~~ 112 (291)
.+|+. .|+++|.+++|..|...
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~Gs~~ 206 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQGAPG 206 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCCCch
Confidence 88862 28999999999988653
No 98
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.18 E-value=6.1e-11 Score=100.82 Aligned_cols=102 Identities=18% Similarity=0.212 Sum_probs=67.5
Q ss_pred CeEEEEcCCCCChh-HHHHHHHHHHHhCCCcEEEEecCCCCCCCc-chHHHHHHHHHHHHHHHHhcCC----CceEEEEe
Q psy17147 5 RPVLVIHGILSGNK-TLEKFKERIERFHPGTKVVIPDNYSNWASL-EPMWNQVLFFGSLVMKMSQNHP----EGIHLIGY 78 (291)
Q Consensus 5 ~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~-~~~~~~~~~~~~~i~~~~~~~~----~~~~lvGh 78 (291)
|.||++-|+.+-.+ .|..+.++|..+ |+.++++|.||.|.|. .+.....+.+.+.|.+.+...+ .++.++|.
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~r--GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPR--GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHC--T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhC--CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEe
Confidence 44555666666654 455666778876 9999999999999984 2222233455556666566665 69999999
Q ss_pred ChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 79 SQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 79 S~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
|+||++|.++|...+.+ ++++|.+|++...
T Consensus 269 SfGGy~AvRlA~le~~R-lkavV~~Ga~vh~ 298 (411)
T PF06500_consen 269 SFGGYYAVRLAALEDPR-LKAVVALGAPVHH 298 (411)
T ss_dssp THHHHHHHHHHHHTTTT--SEEEEES---SC
T ss_pred ccchHHHHHHHHhcccc-eeeEeeeCchHhh
Confidence 99999999999988887 9999999887654
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=99.17 E-value=3.3e-10 Score=88.65 Aligned_cols=99 Identities=23% Similarity=0.271 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC--CCC----------C--cchHHHHHHHHHHHHHHHHhc
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS--NWA----------S--LEPMWNQVLFFGSLVMKMSQN 68 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G--~g~----------S--~~~~~~~~~~~~~~i~~~~~~ 68 (291)
..|.||++||+|++...+-++.+.+ .|.+.++.+--+= .|. + ........+.+++.+....++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~---~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELI---LPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhc---CCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 3556999999999988888755544 4556666653210 110 1 122245567788888888887
Q ss_pred CC---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 69 HP---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 69 ~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
++ ++++++|+|-|+.+++.++.++|+. +++++++++
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~-~~~ail~~g 132 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGL-FAGAILFSG 132 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchh-hccchhcCC
Confidence 76 7999999999999999999999996 888888844
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.14 E-value=3.3e-10 Score=92.54 Aligned_cols=102 Identities=21% Similarity=0.117 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCC----CCCCCcchHHHHHHHHHHHHHHHHhcC----C-C
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNY----SNWASLEPMWNQVLFFGSLVMKMSQNH----P-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~----G~g~S~~~~~~~~~~~~~~i~~~~~~~----~-~ 71 (291)
+..||||.|++... .+...+++.|... ++.++-+-++ |+|-+ .....++++.+.|..+.... + +
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~--~wsl~q~~LsSSy~G~G~~--SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEET--GWSLFQVQLSSSYSGWGTS--SLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-T--T-EEEEE--GGGBTTS-S----HHHHHHHHHHHHHHHHHHS------S
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccC--CeEEEEEEecCccCCcCcc--hhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 55699999999875 5677888999765 8899988764 45544 23335666666666655552 4 8
Q ss_pred ceEEEEeChHHHHHHHHHHhCCC----CCcceEEEecCCCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPN----HNVRNFISLSSPHGG 109 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~----~~v~~li~~~~~~~~ 109 (291)
+++|+|||-|+.-+++|+..... .+|.++|+-++....
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 99999999999999999997653 349999998776544
No 101
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.14 E-value=2.1e-09 Score=86.21 Aligned_cols=96 Identities=22% Similarity=0.309 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCC---Ccch-HH------------HHHHHHHHHHHHHHh
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWA---SLEP-MW------------NQVLFFGSLVMKMSQ 67 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~---S~~~-~~------------~~~~~~~~~i~~~~~ 67 (291)
.|.||++|++.|-....+.+++.|++. ||.|+++|+.+... +... .. ...+++...+..+..
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~~--Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAEE--GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHHT--T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHhc--CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 577999999999888888999999997 99999999865333 1111 10 111223333343333
Q ss_pred cC--C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 68 NH--P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 68 ~~--~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
+- . +++.++|+|+||.+++.++.+.+ . +++.+..
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~~-~-~~a~v~~ 128 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARDP-R-VDAAVSF 128 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCTT-T-SSEEEEE
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhcc-c-cceEEEE
Confidence 33 2 79999999999999999998874 3 7877766
No 102
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.12 E-value=1.3e-10 Score=76.71 Aligned_cols=62 Identities=15% Similarity=0.074 Sum_probs=52.9
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcc--hHHHHHHHHHHHHHHHHh
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLE--PMWNQVLFFGSLVMKMSQ 67 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~--~~~~~~~~~~~~i~~~~~ 67 (291)
+..|+++||++.++..|..+++.|.+. ||.|+++|+||||.|.. ....+++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~--G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQ--GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhC--CCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 345799999999999999999999997 99999999999999963 335677888888887653
No 103
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.11 E-value=3.8e-10 Score=102.62 Aligned_cols=102 Identities=15% Similarity=-0.004 Sum_probs=74.3
Q ss_pred CCeEEEEcCCCCChh---HHH-HHHHHHHHhCCCcEEEEecCCCCCCCcchH----HHHHHHHHHHHHHHHhc-CC-Cce
Q psy17147 4 YRPVLVIHGILSGNK---TLE-KFKERIERFHPGTKVVIPDNYSNWASLEPM----WNQVLFFGSLVMKMSQN-HP-EGI 73 (291)
Q Consensus 4 ~~~vvllHG~~~~~~---~~~-~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~----~~~~~~~~~~i~~~~~~-~~-~~~ 73 (291)
.|.||++||++.+.. .+. .....|.++ ||.|+++|+||+|.|.... ....+|..+.|..+..+ .. .++
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~--Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v 99 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ--GYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNV 99 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHHhC--CcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcE
Confidence 467899999998753 222 344567776 9999999999999995321 22345555555544333 12 689
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 74 HLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
.++|||+||.+++.+|..+|.. ++++|..++...
T Consensus 100 ~~~G~S~GG~~a~~~a~~~~~~-l~aiv~~~~~~d 133 (550)
T TIGR00976 100 GMLGVSYLAVTQLLAAVLQPPA-LRAIAPQEGVWD 133 (550)
T ss_pred EEEEeChHHHHHHHHhccCCCc-eeEEeecCcccc
Confidence 9999999999999999999886 999998766543
No 104
>KOG2931|consensus
Probab=99.09 E-value=3e-10 Score=90.81 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCCChhH-HHHH-----HHHHHHhCCCcEEEEecCCCCCCC--cch---HHHHHHHHHHHHHHHHhcCC-C
Q psy17147 4 YRPVLVIHGILSGNKT-LEKF-----KERIERFHPGTKVVIPDNYSNWAS--LEP---MWNQVLFFGSLVMKMSQNHP-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~-~~~~-----~~~L~~~~~g~~v~~~D~~G~g~S--~~~---~~~~~~~~~~~i~~~~~~~~-~ 71 (291)
+|.+|=.|.++-+... +..+ +..+.++ +-++-+|.||+-.. .-+ .-.++++++++|..++++++ +
T Consensus 46 kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~---fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk 122 (326)
T KOG2931|consen 46 KPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH---FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK 122 (326)
T ss_pred CceEEEecccccchHhHhHHhhcCHhHHHHHhh---eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 5556679999888644 5543 3334443 48999999996443 111 25578999999999999999 9
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.++-+|---|++|..++|..+|++ |.++|++++-.
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~r-V~GLvLIn~~~ 157 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPER-VLGLVLINCDP 157 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhh-eeEEEEEecCC
Confidence 999999999999999999999998 99999996543
No 105
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.07 E-value=2.1e-10 Score=98.37 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=80.0
Q ss_pred CeEEEEcCCCCChh-HHHHHHHHHHHhCCCcEEEEecCCCCCCCc-chHHHHHHHHHHHHHHHHhcCCCceEEEEeChHH
Q psy17147 5 RPVLVIHGILSGNK-TLEKFKERIERFHPGTKVVIPDNYSNWASL-EPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGG 82 (291)
Q Consensus 5 ~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~-~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG 82 (291)
|||+++.-+.++.. .-+++++.|.. |+.|+..||..-+... ..-...++|+++.|.+.+++.+.+++++|+|+||
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~---g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~v~l~GvCqgG 179 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP---DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPDIHVIAVCQPA 179 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC---CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCCCcEEEEchhh
Confidence 69999999987754 34567777754 7899999998777442 2223467788888888888889559999999999
Q ss_pred HHHHHHHHhC-----CCCCcceEEEecCCCCCccC
Q psy17147 83 LIARGILEQF-----PNHNVRNFISLSSPHGGQYG 112 (291)
Q Consensus 83 ~ia~~~a~~~-----p~~~v~~li~~~~~~~~~~~ 112 (291)
..++.+++.+ |.. +++++++++|......
T Consensus 180 ~~~laa~Al~a~~~~p~~-~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 180 VPVLAAVALMAENEPPAQ-PRSMTLMGGPIDARAS 213 (406)
T ss_pred HHHHHHHHHHHhcCCCCC-cceEEEEecCccCCCC
Confidence 9977766654 554 9999999999876554
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.07 E-value=1.9e-09 Score=80.08 Aligned_cols=93 Identities=13% Similarity=0.031 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHH
Q psy17147 4 YRPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGG 82 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG 82 (291)
.+.+|++||+.+|. ..|.... ....+. +-.+++. + ......++..+.+.+-+....++++||+||+|+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~w---e~~l~~--a~rveq~----~--w~~P~~~dWi~~l~~~v~a~~~~~vlVAHSLGc 70 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRW---ESALPN--ARRVEQD----D--WEAPVLDDWIARLEKEVNAAEGPVVLVAHSLGC 70 (181)
T ss_pred CceEEEecCCCCCChhHHHHHH---HhhCcc--chhcccC----C--CCCCCHHHHHHHHHHHHhccCCCeEEEEecccH
Confidence 35789999999997 4666543 222222 2222322 1 112246677777777677777889999999999
Q ss_pred HHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 83 LIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 83 ~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
..+++++.+.... |.+++++++|..
T Consensus 71 ~~v~h~~~~~~~~-V~GalLVAppd~ 95 (181)
T COG3545 71 ATVAHWAEHIQRQ-VAGALLVAPPDV 95 (181)
T ss_pred HHHHHHHHhhhhc-cceEEEecCCCc
Confidence 9999999988774 999999988754
No 107
>PRK10115 protease 2; Provisional
Probab=99.01 E-value=2.3e-09 Score=99.48 Aligned_cols=101 Identities=11% Similarity=-0.052 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cch------HHHHHHHHHHHHHHHHhcC--C
Q psy17147 4 YRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEP------MWNQVLFFGSLVMKMSQNH--P 70 (291)
Q Consensus 4 ~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~------~~~~~~~~~~~i~~~~~~~--~ 70 (291)
.|.||++||..+.+ ..|......|.++ ||-|+.++.||.|.- ... -..+++|+.+.++.++++- .
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~~~~~~l~~r--G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d 522 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFSFSRLSLLDR--GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS 522 (686)
T ss_pred CCEEEEEECCCCCCCCCCccHHHHHHHHC--CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 47788899877765 3566666778886 999999999995442 211 1245788888888877664 2
Q ss_pred -CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 71 -EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 71 -~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+++.+.|.|.||+++..++.++|++ .+++|+..+..
T Consensus 523 ~~rl~i~G~S~GG~l~~~~~~~~Pdl-f~A~v~~vp~~ 559 (686)
T PRK10115 523 PSLCYGMGGSAGGMLMGVAINQRPEL-FHGVIAQVPFV 559 (686)
T ss_pred hHHeEEEEECHHHHHHHHHHhcChhh-eeEEEecCCch
Confidence 8999999999999999999999997 88887765443
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=2.4e-09 Score=86.50 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=76.5
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHh-cCC-CceEEEEeChHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQ-NHP-EGIHLIGYSQGG 82 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~-~~~-~~~~lvGhS~GG 82 (291)
+||+++|+.+|+...|..++..|... ..|+.++.+|.+..... ..+++++++...+.+. ..+ .+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~---~~v~~l~a~g~~~~~~~-~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL---LPVYGLQAPGYGAGEQP-FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC---ceeeccccCcccccccc-cCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999875 49999999998753222 2345555444443343 445 899999999999
Q ss_pred HHHHHHHHhC--CCCCcceEEEecCCCC
Q psy17147 83 LIARGILEQF--PNHNVRNFISLSSPHG 108 (291)
Q Consensus 83 ~ia~~~a~~~--p~~~v~~li~~~~~~~ 108 (291)
.+|..+|.+. .++.|..+++++++..
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999863 2334999999977765
No 109
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.99 E-value=1.3e-09 Score=92.62 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=88.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcE---EEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeC
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTK---VVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYS 79 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~---v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS 79 (291)
.-|++++||++.+...|..+...+... |+. ++.+++++. ....+.....+.+.+.|.+++...+ +++.++|||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAIL--GWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcch--HHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 448999999988889999888887664 666 888888865 3344445567788888888888888 999999999
Q ss_pred hHHHHHHHHHHhCC--CCCcceEEEecCCCCCccCcc
Q psy17147 80 QGGLIARGILEQFP--NHNVRNFISLSSPHGGQYGSN 114 (291)
Q Consensus 80 ~GG~ia~~~a~~~p--~~~v~~li~~~~~~~~~~~~~ 114 (291)
|||.+.+.++...+ .. |.+++.+++|..|+...+
T Consensus 136 ~GG~~~ry~~~~~~~~~~-V~~~~tl~tp~~Gt~~~~ 171 (336)
T COG1075 136 MGGLDSRYYLGVLGGANR-VASVVTLGTPHHGTELAD 171 (336)
T ss_pred ccchhhHHHHhhcCccce-EEEEEEeccCCCCchhhh
Confidence 99999999999988 55 999999999999876543
No 110
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.99 E-value=1.7e-09 Score=108.34 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=81.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC--CceEEEEeChH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP--EGIHLIGYSQG 81 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS~G 81 (291)
+++++|+||+++++..|..+++.|.. +++|+.++.+|++.+. +..++++++++++...+++.. .+++++|||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~---~~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDP---QWSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCC---CCcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 57899999999999999999999965 5699999999998763 334678888888888777654 68999999999
Q ss_pred HHHHHHHHHh---CCCCCcceEEEecC
Q psy17147 82 GLIARGILEQ---FPNHNVRNFISLSS 105 (291)
Q Consensus 82 G~ia~~~a~~---~p~~~v~~li~~~~ 105 (291)
|.+|..+|.+ .++. +..++++++
T Consensus 1144 g~vA~e~A~~l~~~~~~-v~~l~l~~~ 1169 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEE-VAFLGLLDT 1169 (1296)
T ss_pred hHHHHHHHHHHHHcCCc-eeEEEEecC
Confidence 9999999986 4554 889998865
No 111
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.97 E-value=2.2e-09 Score=90.43 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=85.6
Q ss_pred CCeEEEEcCCCCChhHH-----HHHHHHHHHhCCCcEEEEecCCCCCCCc--chH-HHHHHHHHHHHHHHHhcCC-CceE
Q psy17147 4 YRPVLVIHGILSGNKTL-----EKFKERIERFHPGTKVVIPDNYSNWASL--EPM-WNQVLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~~~g~~v~~~D~~G~g~S~--~~~-~~~~~~~~~~i~~~~~~~~-~~~~ 74 (291)
++|++++|-+-.....| .+++..|.+. |..|..+++++-..+. ... .+-.+.+.+.|..+.+..+ ++++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~--g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQ--GLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHc--CCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 67899999988875444 3678888887 9999999998765553 222 3334778888888888888 9999
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCcc
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQY 111 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~~ 111 (291)
++|+|.||+++..++..++.++|++++++.++...+.
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 9999999999999999988866999999998886544
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.97 E-value=1.4e-08 Score=83.64 Aligned_cols=102 Identities=20% Similarity=0.222 Sum_probs=81.8
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHh-CCCcEEEEecCCCCCCCcch-------H----HHHHHHHHHHHHHHHhcC--C
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERF-HPGTKVVIPDNYSNWASLEP-------M----WNQVLFFGSLVMKMSQNH--P 70 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~-~~g~~v~~~D~~G~g~S~~~-------~----~~~~~~~~~~i~~~~~~~--~ 70 (291)
.-+++++|.+|-...|..+.+.|.++ .+.+.|+++.+.||-.+... . ..+++.-.+.|++++... +
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 45799999999999999999999987 37999999999998766332 2 445556666677766654 4
Q ss_pred -CceEEEEeChHHHHHHHHHHhCC--CCCcceEEEecCC
Q psy17147 71 -EGIHLIGYSQGGLIARGILEQFP--NHNVRNFISLSSP 106 (291)
Q Consensus 71 -~~~~lvGhS~GG~ia~~~a~~~p--~~~v~~li~~~~~ 106 (291)
.+++++|||.|++++++++.+.+ ..+|.+++++-+.
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 78999999999999999999999 2348888888443
No 113
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.94 E-value=2.4e-08 Score=78.37 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhC-C--CcEEEEecCCCC----CC-C---cchH--------HHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFH-P--GTKVVIPDNYSN----WA-S---LEPM--------WNQVLFFGSLVMK 64 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~-~--g~~v~~~D~~G~----g~-S---~~~~--------~~~~~~~~~~i~~ 64 (291)
.-|.||+||.+|++++....+..|...+ . .--+..+|--|. |. + ..|. ..+..+....++.
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3478999999999999999999987753 1 112444555441 11 0 1111 2233344444444
Q ss_pred H----HhcCC-CceEEEEeChHHHHHHHHHHhCCC----CCcceEEEecCCCC
Q psy17147 65 M----SQNHP-EGIHLIGYSQGGLIARGILEQFPN----HNVRNFISLSSPHG 108 (291)
Q Consensus 65 ~----~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~----~~v~~li~~~~~~~ 108 (291)
+ ..++. .++.+|||||||.-..+|+..+.+ .+++++|.+++|.+
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4 44556 899999999999999999987654 23999999998876
No 114
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.94 E-value=2.5e-10 Score=92.35 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=69.6
Q ss_pred CCeEEEEcCCCCChhH-HHHH-----HHHHHHhCCCcEEEEecCCCCCCCcc-----hHHHHHHHHHHHHHHHHhcCC-C
Q psy17147 4 YRPVLVIHGILSGNKT-LEKF-----KERIERFHPGTKVVIPDNYSNWASLE-----PMWNQVLFFGSLVMKMSQNHP-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~-~~~~-----~~~L~~~~~g~~v~~~D~~G~g~S~~-----~~~~~~~~~~~~i~~~~~~~~-~ 71 (291)
+|++|=.|-+|-+... |..+ ++-+.+ .+-++=+|.||+..... ..-.++++++++|..++++++ +
T Consensus 23 kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~---~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk 99 (283)
T PF03096_consen 23 KPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ---NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK 99 (283)
T ss_dssp S-EEEEE--TT--HHHHCHHHHCSHHHHHHHT---TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT--
T ss_pred CceEEEeccccccchHHHHHHhcchhHHHHhh---ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc
Confidence 5667779988887654 5543 334444 46999999999765421 125678999999999999999 9
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
.++-+|--.|+.|..++|.++|++ |.++|++++...
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~-V~GLiLvn~~~~ 135 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPER-VLGLILVNPTCT 135 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGG-EEEEEEES---S
T ss_pred EEEEEeeccchhhhhhccccCccc-eeEEEEEecCCC
Confidence 999999999999999999999997 999999976543
No 115
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=4.9e-08 Score=78.82 Aligned_cols=95 Identities=21% Similarity=0.358 Sum_probs=70.6
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC-CCCC--cc--hH------------HHHHHHHHHHHHHHHh
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS-NWAS--LE--PM------------WNQVLFFGSLVMKMSQ 67 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G-~g~S--~~--~~------------~~~~~~~~~~i~~~~~ 67 (291)
|.||++|++.|-....+.++++|+.. ||.|+++|+.+ .|.+ .. +. ....+++...+..+..
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~--Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~ 105 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKA--GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLAR 105 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhC--CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh
Confidence 77899999999999999999999998 99999999965 3333 11 10 1223344444444332
Q ss_pred cC--C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 68 NH--P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 68 ~~--~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
+- . +++.++|+||||.+++.++.+.|+ +++.+..
T Consensus 106 ~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~--v~a~v~f 142 (236)
T COG0412 106 QPQVDPKRIGVVGFCMGGGLALLAATRAPE--VKAAVAF 142 (236)
T ss_pred CCCCCCceEEEEEEcccHHHHHHhhcccCC--ccEEEEe
Confidence 32 2 789999999999999999999883 7887766
No 116
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.90 E-value=2.4e-08 Score=80.41 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHh--CCCcEEEEecCCCCCCCcc------hHHHHHHHHHHHHHHHHhcCC-Cce
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERF--HPGTKVVIPDNYSNWASLE------PMWNQVLFFGSLVMKMSQNHP-EGI 73 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~--~~g~~v~~~D~~G~g~S~~------~~~~~~~~~~~~i~~~~~~~~-~~~ 73 (291)
.+..+||+||++.+-+.--.-+..+... +++ .++.+.||..|.-.. ....+.+.+++.|..+.+..+ +++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4667899999999964432222223222 223 899999998776421 113445667777777666656 999
Q ss_pred EEEEeChHHHHHHHHHHhCCC--------CCcceEEEecCC
Q psy17147 74 HLIGYSQGGLIARGILEQFPN--------HNVRNFISLSSP 106 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~--------~~v~~li~~~~~ 106 (291)
+|++||||+.+.+..+..... .++..++++++-
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 999999999999988765211 137788877654
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.88 E-value=8.3e-08 Score=79.85 Aligned_cols=98 Identities=15% Similarity=0.080 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCCChhHHH-HH-HHHHHHhCCCcEEEEecCCCCCCCcchH----------------HHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLE-KF-KERIERFHPGTKVVIPDNYSNWASLEPM----------------WNQVLFFGSLVMKM 65 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~-~~-~~~L~~~~~g~~v~~~D~~G~g~S~~~~----------------~~~~~~~~~~i~~~ 65 (291)
+|.+|.++|.|.+....+ .+ +..|.++ |+..+.+..|-||...+.. ...+.+... +..+
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~--gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~-Ll~W 168 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKE--GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRA-LLHW 168 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHc--CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHH-HHHH
Confidence 455677889888653222 23 6677776 9999999999888652211 112233333 3334
Q ss_pred HhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 66 SQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 66 ~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
+++.+ .++.+.|.||||.+|...+...|.. |..+-++++
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~p-v~~vp~ls~ 208 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRP-VALVPCLSW 208 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCc-eeEEEeecc
Confidence 44558 9999999999999999999999984 665555543
No 118
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.87 E-value=9.3e-09 Score=86.84 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCCCCh--hHHH-HHHHHHHHh-CCCcEEEEecCCCCCCC-cchHHHHH----HHHHHHHHHHHhcC--C-
Q psy17147 3 RYRPVLVIHGILSGN--KTLE-KFKERIERF-HPGTKVVIPDNYSNWAS-LEPMWNQV----LFFGSLVMKMSQNH--P- 70 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~-~~~~~L~~~-~~g~~v~~~D~~G~g~S-~~~~~~~~----~~~~~~i~~~~~~~--~- 70 (291)
+.|.+|++|||.++. ..|- .+.+.+... ..+++|+++||...... .......+ ..++..|..+.+.. .
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 577889999999998 3454 445544332 13899999999642222 11112222 34444455544333 3
Q ss_pred CceEEEEeChHHHHHHHHHHhCCC-CCcceEEEecCCCCC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQFPN-HNVRNFISLSSPHGG 109 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~p~-~~v~~li~~~~~~~~ 109 (291)
++++|||||+||.+|-.++..... .+|.+++.++++...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 899999999999999999998877 349999999776554
No 119
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.87 E-value=1e-08 Score=86.30 Aligned_cols=96 Identities=21% Similarity=0.096 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCC-Cc-------------------c-hH----HHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWA-SL-------------------E-PM----WNQVLFF 58 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~-S~-------------------~-~~----~~~~~~~ 58 (291)
.|.||.+||.++....|..... ++.. ||-|+.+|.||.|. +. . +. ...+.+.
T Consensus 83 ~Pavv~~hGyg~~~~~~~~~~~-~a~~--G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFDLLP-WAAA--GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp EEEEEEE--TT--GGGHHHHHH-HHHT--T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred cCEEEEecCCCCCCCCcccccc-cccC--CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 4567889999999877776554 4444 99999999999882 20 0 11 1112444
Q ss_pred HHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 59 GSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 59 ~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
.+.+.. +..++ +++.+.|.|+||.+++.+|...+. |++++...+
T Consensus 160 ~ravd~-l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r--v~~~~~~vP 207 (320)
T PF05448_consen 160 VRAVDF-LRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR--VKAAAADVP 207 (320)
T ss_dssp HHHHHH-HHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST---SEEEEESE
T ss_pred HHHHHH-HHhCCCcCcceEEEEeecCchHHHHHHHHhCcc--ccEEEecCC
Confidence 444444 33443 799999999999999999998874 888887744
No 120
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.86 E-value=3.8e-08 Score=79.11 Aligned_cols=101 Identities=24% Similarity=0.236 Sum_probs=71.9
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchHHHHHHHHHHHHHH-HHhcC------C-CceE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS-LEPMWNQVLFFGSLVMK-MSQNH------P-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S-~~~~~~~~~~~~~~i~~-~~~~~------~-~~~~ 74 (291)
.|.|||+||+......|..+.++++.+ ||-|+.+|+...+.. .........++.+.+.+ +...+ . .++.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvASh--GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASH--GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhC--ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 678899999998888899999999997 999999997663332 22223333333333322 11121 2 6899
Q ss_pred EEEeChHHHHHHHHHHhCCC----CCcceEEEecCC
Q psy17147 75 LIGYSQGGLIARGILEQFPN----HNVRNFISLSSP 106 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~----~~v~~li~~~~~ 106 (291)
|.|||-||-+|..++...-+ .++++++++++.
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 99999999999999887721 239999999664
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.86 E-value=1.1e-07 Score=72.52 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=77.9
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGL 83 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ 83 (291)
+-+||+-|=+|=...=..+++.|++. |+.|+.+|-+-+.-+.+.......++.+.|....++.+ +++.|||+|+|+-
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~--G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGAD 80 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQ--GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGAD 80 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHC--CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCch
Confidence 34677777666444445688899987 99999999876666665555666777777777777777 9999999999999
Q ss_pred HHHHHHHhCCC---CCcceEEEecCCCC
Q psy17147 84 IARGILEQFPN---HNVRNFISLSSPHG 108 (291)
Q Consensus 84 ia~~~a~~~p~---~~v~~li~~~~~~~ 108 (291)
+.-....+.|. .+|..++++++...
T Consensus 81 vlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 81 VLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred hHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 98888888876 23888888866543
No 122
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.85 E-value=1.4e-08 Score=80.92 Aligned_cols=97 Identities=24% Similarity=0.146 Sum_probs=66.2
Q ss_pred EEEEcCCCCC---hhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc-----CC-CceEEEE
Q psy17147 7 VLVIHGILSG---NKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN-----HP-EGIHLIG 77 (291)
Q Consensus 7 vvllHG~~~~---~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~-----~~-~~~~lvG 77 (291)
||++||-+-. ......+...+.+.. |+.|+.+|+|=... .+....++|..+.+..++++ .. ++++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~-g~~v~~~~Yrl~p~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAER-GFVVVSIDYRLAPE--APFPAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHH-TSEEEEEE---TTT--SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhc-cEEEEEeecccccc--ccccccccccccceeeeccccccccccccceEEee
Confidence 7899986654 234455566666522 99999999995432 23355678888888887777 44 8999999
Q ss_pred eChHHHHHHHHHHhCCC---CCcceEEEecCC
Q psy17147 78 YSQGGLIARGILEQFPN---HNVRNFISLSSP 106 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~---~~v~~li~~~~~ 106 (291)
+|-||.+++.++....+ ..+++++++.+.
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred cccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 99999999999986433 238888888664
No 123
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.84 E-value=1.6e-07 Score=68.67 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=76.9
Q ss_pred CeEEEEcCCCCC--hhHHHHHHHHHHHhCCCcEEEEecCCC-----CCCCcch-HHHH-HHHHHHHHHHHHhcCC-CceE
Q psy17147 5 RPVLVIHGILSG--NKTLEKFKERIERFHPGTKVVIPDNYS-----NWASLEP-MWNQ-VLFFGSLVMKMSQNHP-EGIH 74 (291)
Q Consensus 5 ~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~v~~~D~~G-----~g~S~~~-~~~~-~~~~~~~i~~~~~~~~-~~~~ 74 (291)
-+|||-||.+++ +..+..++..|... |+.|..++++- .|....+ ...+ ...+...+.++...+. .+.+
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~--G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARR--GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhC--ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 357899998887 57888999999987 99999999853 2221111 1222 3556677777777777 7999
Q ss_pred EEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+-||||||-++-.++...... |.++++++-|..
T Consensus 93 ~GGkSmGGR~aSmvade~~A~-i~~L~clgYPfh 125 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAP-IDGLVCLGYPFH 125 (213)
T ss_pred eccccccchHHHHHHHhhcCC-cceEEEecCccC
Confidence 999999999999999887775 999999987753
No 124
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.83 E-value=2.9e-08 Score=78.50 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=73.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCC-CCCcchHHHHHHHHHHHHH----HHHhcC---C-CceE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSN-WASLEPMWNQVLFFGSLVM----KMSQNH---P-EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~-g~S~~~~~~~~~~~~~~i~----~~~~~~---~-~~~~ 74 (291)
.|.|+|+||+.-..+.|..+...++.+ ||-|+++++..- +-+......+....++++. .++... . .++.
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASH--GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASH--GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhc--CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 567899999999999999999999997 999999999752 2111222222333333332 222211 2 7899
Q ss_pred EEEeChHHHHHHHHHHhC-CCCCcceEEEecCCC
Q psy17147 75 LIGYSQGGLIARGILEQF-PNHNVRNFISLSSPH 107 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~-p~~~v~~li~~~~~~ 107 (291)
++|||.||-.|..+|..+ .+.++.++|.+++..
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 999999999999999887 566699999886543
No 125
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.78 E-value=3.3e-08 Score=78.71 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=47.7
Q ss_pred CCCCCeEEEEcCCCCChhHHHHHHHHHHHhCC--CcEEEEecCCC-----CCCC------------------c------c
Q psy17147 1 MKRYRPVLVIHGILSGNKTLEKFKERIERFHP--GTKVVIPDNYS-----NWAS------------------L------E 49 (291)
Q Consensus 1 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~--g~~v~~~D~~G-----~g~S------------------~------~ 49 (291)
|..++.|+||||++.++..++.....|.+... ++.++.+|-|- .+-. + .
T Consensus 1 ~~~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 1 MTRKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp -----EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCCCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 67788899999999999888866555544321 46888887642 1110 0 0
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHHHHHHHHh
Q psy17147 50 PMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 50 ~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia~~~a~~ 91 (291)
.....+++..+.|.+.+++.+.=.-|+|+|.||.+|..++..
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~ 122 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLAL 122 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHH
Confidence 012335566666666666655445699999999999888864
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=1.7e-08 Score=78.19 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=65.7
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---------HHHHHHHHHHHHHHHhcCC-CceEEE
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---------WNQVLFFGSLVMKMSQNHP-EGIHLI 76 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---------~~~~~~~~~~i~~~~~~~~-~~~~lv 76 (291)
+++-.+++.--..++.++...... ||.|+.+|+||.|.|.... .....|+...|..+.+.++ .+.++|
T Consensus 33 ~~va~a~Gv~~~fYRrfA~~a~~~--Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~v 110 (281)
T COG4757 33 LVVAGATGVGQYFYRRFAAAAAKA--GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFV 110 (281)
T ss_pred EEecccCCcchhHhHHHHHHhhcc--CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEe
Confidence 344445555557888898888876 9999999999999884322 3334677778888777777 899999
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
|||+||.+.-.+. .++ +..+..+.++
T Consensus 111 gHS~GGqa~gL~~-~~~--k~~a~~vfG~ 136 (281)
T COG4757 111 GHSFGGQALGLLG-QHP--KYAAFAVFGS 136 (281)
T ss_pred eccccceeecccc-cCc--ccceeeEecc
Confidence 9999997644333 344 2555555543
No 127
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.70 E-value=2.6e-07 Score=73.21 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=71.0
Q ss_pred CCeEEEEcCCCCChhHHHHH--HHHHHHhCCCcEEEEecCCC------CCCCcc----hHHHHHHHHHHHHHHHHhcCC-
Q psy17147 4 YRPVLVIHGILSGNKTLEKF--KERIERFHPGTKVVIPDNYS------NWASLE----PMWNQVLFFGSLVMKMSQNHP- 70 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~--~~~L~~~~~g~~v~~~D~~G------~g~S~~----~~~~~~~~~~~~i~~~~~~~~- 70 (291)
.|-||++||.+.+...+... ...+++.. ||-|+.++... +..-.. ........++..|+.+..+.+
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~-GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADRE-GFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcC-CeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 35578899999998776642 34577765 89999998532 111001 001223344455555555554
Q ss_pred --CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 71 --EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 71 --~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
.++++.|+|.||+++..++..+|+. +.++.++++...+
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~-faa~a~~sG~~~~ 134 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDL-FAAVAVVSGVPYG 134 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCcc-ceEEEeecccccc
Confidence 7999999999999999999999997 8888777655444
No 128
>KOG3724|consensus
Probab=98.68 E-value=1.6e-07 Score=84.68 Aligned_cols=106 Identities=23% Similarity=0.238 Sum_probs=70.9
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHH--------h------CCCcEEEEecCCC-----CCCCcchHHHHHHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIER--------F------HPGTKVVIPDNYS-----NWASLEPMWNQVLFFGSLVM 63 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~--------~------~~g~~v~~~D~~G-----~g~S~~~~~~~~~~~~~~i~ 63 (291)
++.||+|++|..||...-+.++..-+. + .-.++..++|+-+ ||.+..+. .|.+.++|+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQ---tEYV~dAIk 164 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQ---TEYVNDAIK 164 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHH---HHHHHHHHH
Confidence 688999999999998777766554442 0 1146778888865 45544443 344444444
Q ss_pred HHHhcC----------CCceEEEEeChHHHHHHHHHHh---CCCCCcceEEEecCCCCCccC
Q psy17147 64 KMSQNH----------PEGIHLIGYSQGGLIARGILEQ---FPNHNVRNFISLSSPHGGQYG 112 (291)
Q Consensus 64 ~~~~~~----------~~~~~lvGhS~GG~ia~~~a~~---~p~~~v~~li~~~~~~~~~~~ 112 (291)
.++... +..+++|||||||.+|+..+.. .++. |.-++.+++|+.....
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~s-VntIITlssPH~a~Pl 225 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGS-VNTIITLSSPHAAPPL 225 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccch-hhhhhhhcCcccCCCC
Confidence 443322 1459999999999999887753 2334 8888999999876544
No 129
>KOG2565|consensus
Probab=98.68 E-value=4.7e-08 Score=80.87 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHh--CC-----CcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcCC-Cce
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERF--HP-----GTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNHP-EGI 73 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~--~~-----g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~~-~~~ 73 (291)
-.||+++|||+||-+.+..++..|.+- +. -|.||++.+||+|-|..+. .-..-..|..+..++-+++ .++
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkf 231 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKF 231 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCccee
Confidence 468999999999999999999988753 00 3799999999999996543 3345677888899999999 999
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCcceEEE
Q psy17147 74 HLIGYSQGGLIARGILEQFPNHNVRNFIS 102 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~~~v~~li~ 102 (291)
.|=|-.||+.|+..+|..+|+. |.++=+
T Consensus 232 fiqGgDwGSiI~snlasLyPen-V~GlHl 259 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYPEN-VLGLHL 259 (469)
T ss_pred EeecCchHHHHHHHHHhhcchh-hhHhhh
Confidence 9999999999999999999996 877644
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.63 E-value=1.9e-07 Score=78.07 Aligned_cols=89 Identities=16% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC--CCCCc----c----h------HHHHHHHHHHHHHHH--
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS--NWASL----E----P------MWNQVLFFGSLVMKM-- 65 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G--~g~S~----~----~------~~~~~~~~~~~i~~~-- 65 (291)
-|-|++-||.++....+..+++.+++. ||-|..+|.+| .|... . . ....+..+.+.+.+.
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~--Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASY--GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhC--ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 356788999999999999999999996 99999999998 33321 1 0 012222333333332
Q ss_pred ----HhcCC-CceEEEEeChHHHHHHHHHHhCCC
Q psy17147 66 ----SQNHP-EGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 66 ----~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
..++. .++.++|||+||+.++..+....+
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhcccccc
Confidence 22333 789999999999999999876655
No 131
>KOG4627|consensus
Probab=98.63 E-value=1.3e-07 Score=72.01 Aligned_cols=99 Identities=15% Similarity=0.058 Sum_probs=70.4
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCCc--chHHHHHHHHHHHHHHHHhcCC--CceEEE
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWASL--EPMWNQVLFFGSLVMKMSQNHP--EGIHLI 76 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~--~~~~~~~~~~~~~i~~~~~~~~--~~~~lv 76 (291)
.|..||+||.--.. ..--..+.-+.++ ||+|..+++ +.+. .....++.++...+..+++..+ +.+.+-
T Consensus 67 ~klfIfIHGGYW~~g~rk~clsiv~~a~~~--gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMCLSIVGPAVRR--GYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred ccEEEEEecchhhcCchhcccchhhhhhhc--CeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 56679999843221 1112234444444 899988754 3442 3346678888888888888887 788899
Q ss_pred EeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 77 GYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 77 GhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
|||-|+-+|+++..+..+.+|.+++++++.+
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 9999999999999987775699998886544
No 132
>KOG2100|consensus
Probab=98.62 E-value=3.7e-07 Score=85.37 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=69.1
Q ss_pred CCeEEEEcCCCCCh-------hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---------HHHHHHHHHHHHHHHh
Q psy17147 4 YRPVLVIHGILSGN-------KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---------WNQVLFFGSLVMKMSQ 67 (291)
Q Consensus 4 ~~~vvllHG~~~~~-------~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---------~~~~~~~~~~i~~~~~ 67 (291)
.|-|+.+||-.+|- -.|..+ .... . |+-|+.+|.||.|...... ...++|....++.+++
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~-~-g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSS-R-GFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhcc-C-CeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 45567788888732 355554 2333 3 8999999999976542221 2346777777777776
Q ss_pred cCC---CceEEEEeChHHHHHHHHHHhCCCCCcceE-EEecCC
Q psy17147 68 NHP---EGIHLIGYSQGGLIARGILEQFPNHNVRNF-ISLSSP 106 (291)
Q Consensus 68 ~~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~l-i~~~~~ 106 (291)
..- +++.+.|+|.||+++...+...|+. +.+. +.+++.
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPV 643 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPV 643 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecce
Confidence 653 8999999999999999999999865 4444 666554
No 133
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.61 E-value=3.5e-07 Score=72.77 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=31.1
Q ss_pred CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+++.|+|.|.||-+|+.+|..+|+ |+++|.++++..
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~~--i~avVa~~ps~~ 57 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFPQ--ISAVVAISPSSV 57 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSSS--EEEEEEES--SB
T ss_pred CCEEEEEECHHHHHHHHHHhcCCC--ccEEEEeCCcee
Confidence 699999999999999999999994 999999966553
No 134
>KOG2624|consensus
Probab=98.58 E-value=9.8e-08 Score=81.99 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCCCChhHHH------HHHHHHHHhCCCcEEEEecCCCCCCCc-----ch--H----HH-----HHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLE------KFKERIERFHPGTKVVIPDNYSNWASL-----EP--M----WN-----QVLFFGS 60 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~------~~~~~L~~~~~g~~v~~~D~~G~g~S~-----~~--~----~~-----~~~~~~~ 60 (291)
.+|||+|.||+.+++..|- .++-.|++. ||+|..-+.||...|. .+ . .. ...|+.+
T Consensus 72 ~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lada--GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA 149 (403)
T KOG2624|consen 72 KRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADA--GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPA 149 (403)
T ss_pred CCCcEEEeeccccccccceecCccccHHHHHHHc--CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHH
Confidence 4689999999999999885 456677776 9999999999976651 11 1 11 2356788
Q ss_pred HHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC--CCcceEEEecCCC
Q psy17147 61 LVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN--HNVRNFISLSSPH 107 (291)
Q Consensus 61 ~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~--~~v~~li~~~~~~ 107 (291)
.|..+++..+ ++++.||||.|+.+....+...|+ .+|+.++++++..
T Consensus 150 ~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 150 MIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 8888888888 999999999999999999988876 3399999998776
No 135
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=3.9e-08 Score=78.06 Aligned_cols=95 Identities=19% Similarity=0.098 Sum_probs=67.7
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcch-----HH---------------------HHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP-----MW---------------------NQVLF 57 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~-----~~---------------------~~~~~ 57 (291)
.|.||-.||.++....|......-.. ||.|+..|.||.|.|... .. .-..|
T Consensus 83 ~P~vV~fhGY~g~~g~~~~~l~wa~~---Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWHDMLHWAVA---GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred cceEEEEeeccCCCCCcccccccccc---ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 46688899999998777655443322 899999999998876220 00 11346
Q ss_pred HHHHHHHHHhc--CC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 58 FGSLVMKMSQN--HP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 58 ~~~~i~~~~~~--~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
.++++..+..- .. +++.+.|.|.||.+++.++...| ++++++..
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~--rik~~~~~ 206 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP--RIKAVVAD 206 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh--hhhccccc
Confidence 66666654332 23 89999999999999999998777 37777765
No 136
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.51 E-value=1.6e-06 Score=75.22 Aligned_cols=102 Identities=21% Similarity=0.236 Sum_probs=61.8
Q ss_pred CCCeEEEEc-------CCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC--Cce
Q psy17147 3 RYRPVLVIH-------GILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP--EGI 73 (291)
Q Consensus 3 ~~~~vvllH-------G~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~--~~~ 73 (291)
.++|+|++- |++|-.. =.++-..|.. |..||.+.+.-.-.......+-....++.++.+.+..+ .+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~---GHPvYFV~F~p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp 142 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA---GHPVYFVGFFPEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKP 142 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc---CCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 456677663 3333322 1133445554 45666655532211112222223334445555555555 489
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 74 HLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
++||.+.||+.++.+|+.+|+. +.-+|+-|+|..-
T Consensus 143 ~liGnCQgGWa~~mlAA~~Pd~-~gplvlaGaPlsy 177 (581)
T PF11339_consen 143 NLIGNCQGGWAAMMLAALRPDL-VGPLVLAGAPLSY 177 (581)
T ss_pred eEEeccHHHHHHHHHHhcCcCc-cCceeecCCCccc
Confidence 9999999999999999999997 8888888888754
No 137
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.50 E-value=1e-06 Score=76.04 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC---c--chH---------------------------
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS---L--EPM--------------------------- 51 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~--~~~--------------------------- 51 (291)
-|.|||.||++++...+..++..|+.+ ||-|+++|.|..-.+ . ...
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~--GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASH--GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHT--T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhC--CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 467899999999999999999999998 999999999854221 0 000
Q ss_pred --------HHHHHHHHHHHHHHHh----------------------cCC-CceEEEEeChHHHHHHHHHHhCCCCCcceE
Q psy17147 52 --------WNQVLFFGSLVMKMSQ----------------------NHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNF 100 (291)
Q Consensus 52 --------~~~~~~~~~~i~~~~~----------------------~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~l 100 (291)
.....++...+..+.+ ++. .++.++|||+||..++..+.+.. ++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~--r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT--RFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T--T--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc--CcceE
Confidence 0112222222222211 112 57899999999999999888774 39999
Q ss_pred EEecCCCC
Q psy17147 101 ISLSSPHG 108 (291)
Q Consensus 101 i~~~~~~~ 108 (291)
|++++...
T Consensus 256 I~LD~W~~ 263 (379)
T PF03403_consen 256 ILLDPWMF 263 (379)
T ss_dssp EEES---T
T ss_pred EEeCCccc
Confidence 99977653
No 138
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.47 E-value=6e-07 Score=84.21 Aligned_cols=82 Identities=10% Similarity=0.063 Sum_probs=61.2
Q ss_pred HHHHHHHHhCCCcEEEEecCCCCCCCcchH----HHHHHHHHHHHHHHHhc--------------C---CCceEEEEeCh
Q psy17147 22 KFKERIERFHPGTKVVIPDNYSNWASLEPM----WNQVLFFGSLVMKMSQN--------------H---PEGIHLIGYSQ 80 (291)
Q Consensus 22 ~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~----~~~~~~~~~~i~~~~~~--------------~---~~~~~lvGhS~ 80 (291)
.+.++|..+ ||.|+..|.||.|.|.... ....++..+.|..+..+ . ..++.++|.|+
T Consensus 270 ~~~~~~~~r--GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPR--GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhC--CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 345678876 9999999999999984321 34455666566554421 2 27999999999
Q ss_pred HHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 81 GGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 81 GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
||.+++.+|...|.. ++++|..++.
T Consensus 348 ~G~~~~~aAa~~pp~-LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEG-LETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCc-ceEEEeeCCC
Confidence 999999999888775 8888887554
No 139
>KOG2112|consensus
Probab=98.47 E-value=6.5e-07 Score=68.74 Aligned_cols=97 Identities=18% Similarity=0.307 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCC--------CCC-----------CCcchHHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNY--------SNW-----------ASLEPMWNQVLFFGSLVMK 64 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~--------G~g-----------~S~~~~~~~~~~~~~~i~~ 64 (291)
.-.||++||++.+...|..+++.|.. ++.+.+.+..| |.+ .+.......+...++.+..
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l--~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPL--PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCC--CCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 34699999999999999888887654 37788877432 111 1111234455666777777
Q ss_pred HHhcCC------CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 65 MSQNHP------EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 65 ~~~~~~------~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
++++.. .++.+-|.||||.++++.+..++.. +.+++..
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~-l~G~~~~ 124 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKA-LGGIFAL 124 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccc-cceeecc
Confidence 666542 5789999999999999999999765 6666544
No 140
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.47 E-value=2.3e-06 Score=72.45 Aligned_cols=101 Identities=19% Similarity=0.052 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCCC---hhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc---CC---CceE
Q psy17147 4 YRPVLVIHGILSG---NKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN---HP---EGIH 74 (291)
Q Consensus 4 ~~~vvllHG~~~~---~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~---~~---~~~~ 74 (291)
.|.||++||-+-- ..........+.... |+.|+.+|+|=.-.- +.+..++|..+.+..+.++ ++ +++.
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~-g~~vv~vdYrlaPe~--~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~ 155 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAA-GAVVVSVDYRLAPEH--PFPAALEDAYAAYRWLRANAAELGIDPSRIA 155 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHc-CCEEEecCCCCCCCC--CCCchHHHHHHHHHHHHhhhHhhCCCccceE
Confidence 6788999986543 345545555555433 999999999853332 2233455555555555544 33 8899
Q ss_pred EEEeChHHHHHHHHHHhCCCC---CcceEEEecCCC
Q psy17147 75 LIGYSQGGLIARGILEQFPNH---NVRNFISLSSPH 107 (291)
Q Consensus 75 lvGhS~GG~ia~~~a~~~p~~---~v~~li~~~~~~ 107 (291)
+.|+|-||.+++.++....+. .....+++.+..
T Consensus 156 v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 156 VAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred EEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 999999999999999875542 256667665543
No 141
>PRK04940 hypothetical protein; Provisional
Probab=98.46 E-value=1.9e-06 Score=65.54 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=52.0
Q ss_pred EEEEcCCCCChhH--HHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcC-CCceEEEEeChHHH
Q psy17147 7 VLVIHGILSGNKT--LEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNH-PEGIHLIGYSQGGL 83 (291)
Q Consensus 7 vvllHG~~~~~~~--~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~-~~~~~lvGhS~GG~ 83 (291)
|+++|||.+|+.+ .... .+.--.++++++ +++ +..| ...+..+.+.|..++..- .+++.|||+|+||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~--~l~~~~p~~~~~--~l~----~~~P-~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGy 72 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVL--QLQFIDPDVRLI--SYS----TLHP-KHDMQHLLKEVDKMLQLSDDERPLICGVGLGGY 72 (180)
T ss_pred EEEeCCCCCCCCccHHHHH--hheeeCCCCeEE--ECC----CCCH-HHHHHHHHHHHHHhhhccCCCCcEEEEeChHHH
Confidence 7899999999866 4322 221102345554 322 1112 223333334443333221 25789999999999
Q ss_pred HHHHHHHhCCCCCcceEEEecCCC
Q psy17147 84 IARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 84 ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.|.+++.++.- +.|++++..
T Consensus 73 yA~~La~~~g~----~aVLiNPAv 92 (180)
T PRK04940 73 WAERIGFLCGI----RQVIFNPNL 92 (180)
T ss_pred HHHHHHHHHCC----CEEEECCCC
Confidence 99999999973 356676654
No 142
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.42 E-value=2.1e-06 Score=67.85 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=65.4
Q ss_pred EEcCCC--CChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHH-HHHhcCC-CceEEEEeChHHHH
Q psy17147 9 VIHGIL--SGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVM-KMSQNHP-EGIHLIGYSQGGLI 84 (291)
Q Consensus 9 llHG~~--~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~-~~~~~~~-~~~~lvGhS~GG~i 84 (291)
++|+.+ ++...|..+...|.. .+.|+.+|.+|++.+.... .+++.+++.+. .+....+ .+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~---~~~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG---RRDVSALPLPGFGPGEPLP-ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC---CccEEEecCCCCCCCCCCC-CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 556544 677889999998875 4699999999998763221 23344444332 2233344 78999999999999
Q ss_pred HHHHHHhC---CCCCcceEEEecCCC
Q psy17147 85 ARGILEQF---PNHNVRNFISLSSPH 107 (291)
Q Consensus 85 a~~~a~~~---p~~~v~~li~~~~~~ 107 (291)
+...+.+. +.. +.+++++++..
T Consensus 78 a~~~a~~l~~~~~~-~~~l~~~~~~~ 102 (212)
T smart00824 78 AHAVAARLEARGIP-PAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHhCCCC-CcEEEEEccCC
Confidence 99888864 344 88888886543
No 143
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.41 E-value=3.7e-06 Score=66.12 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=57.6
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCC-CCCcchH-HHHHHHHHHH---HHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSN-WASLEPM-WNQVLFFGSL---VMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~-g~S~~~~-~~~~~~~~~~---i~~~~~~~~-~~~~lvG 77 (291)
.++||+.+||+.....+..++++|+.+ ||+|+.+|.-.| |.|.... ..+++...+. +..+++..+ .++-++.
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~N--GFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIA 107 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSAN--GFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIA 107 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTT--T--EEEE---B-------------HHHHHHHHHHHHHHHHHTT---EEEEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhC--CeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhh
Confidence 578999999999999999999999987 999999998764 6665332 2233333333 333445666 8899999
Q ss_pred eChHHHHHHHHHHhCCCCCcceEEEec
Q psy17147 78 YSQGGLIARGILEQFPNHNVRNFISLS 104 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~~v~~li~~~ 104 (291)
-|+.|-+|...+.+. + +.-+|..-
T Consensus 108 aSLSaRIAy~Va~~i-~--lsfLitaV 131 (294)
T PF02273_consen 108 ASLSARIAYEVAADI-N--LSFLITAV 131 (294)
T ss_dssp ETTHHHHHHHHTTTS-----SEEEEES
T ss_pred hhhhHHHHHHHhhcc-C--cceEEEEe
Confidence 999999999999955 3 66666653
No 144
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.41 E-value=2e-06 Score=74.83 Aligned_cols=89 Identities=26% Similarity=0.343 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHhCCCcEE------EEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHHHHHHHHhC
Q psy17147 19 TLEKFKERIERFHPGTKV------VIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 19 ~~~~~~~~L~~~~~g~~v------~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
.|..+++.|.+. ||.. .-+|+|-.-. ........+.+.|+...+..+++++||||||||.+++.++...
T Consensus 66 ~~~~li~~L~~~--GY~~~~~l~~~pYDWR~~~~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 66 YFAKLIENLEKL--GYDRGKDLFAAPYDWRLSPA---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred hHHHHHHHHHhc--CcccCCEEEEEeechhhchh---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhc
Confidence 699999999874 6532 2267772111 1123334455555554444468999999999999999999987
Q ss_pred CC-----CCcceEEEecCCCCCccC
Q psy17147 93 PN-----HNVRNFISLSSPHGGQYG 112 (291)
Q Consensus 93 p~-----~~v~~li~~~~~~~~~~~ 112 (291)
+. ..|+++|.+++|..|+..
T Consensus 141 ~~~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 141 PQEEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred cchhhHHhhhhEEEEeCCCCCCChH
Confidence 54 249999999999988654
No 145
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.39 E-value=3.5e-06 Score=69.90 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=71.0
Q ss_pred CCeEEEEcCCCCCh-hHHHHH---------HHHHHHhCCCcEEEEecCCCCCCCc---ch-HHHHHHHHHHHHHHHHhcC
Q psy17147 4 YRPVLVIHGILSGN-KTLEKF---------KERIERFHPGTKVVIPDNYSNWASL---EP-MWNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~---------~~~L~~~~~g~~v~~~D~~G~g~S~---~~-~~~~~~~~~~~i~~~~~~~ 69 (291)
-|.||..|+++.+. ...... ...+.++ ||-|+..|.||.|.|. .. .....+|..+.|+.+..+
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~--GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q- 96 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER--GYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ- 96 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT--T-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC--CCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-
Confidence 35567788888754 112111 1227776 9999999999999994 23 355677777777776665
Q ss_pred C---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 70 P---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 70 ~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
+ .+|-++|.|++|..++.+|...|.. +++++...+....
T Consensus 97 pws~G~VGm~G~SY~G~~q~~~A~~~~p~-LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 97 PWSNGKVGMYGISYGGFTQWAAAARRPPH-LKAIVPQSGWSDL 138 (272)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTT-TT-EEEEEEESE-SBT
T ss_pred CCCCCeEEeeccCHHHHHHHHHHhcCCCC-ceEEEecccCCcc
Confidence 5 7999999999999999999977665 9999888665443
No 146
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.38 E-value=4.5e-06 Score=69.45 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCc------chHHHHHHHHHHHHHHHHhcCC-Cce
Q psy17147 2 KRYRPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASL------EPMWNQVLFFGSLVMKMSQNHP-EGI 73 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~------~~~~~~~~~~~~~i~~~~~~~~-~~~ 73 (291)
+.+..+||+||++.+- ..-...++...+.......+.+.||-.|.-. ....++-+.+...|..+.+..+ +++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 3566789999999985 2333444555443223467788998655431 2235566677777777667776 999
Q ss_pred EEEEeChHHHHHHHHHHh
Q psy17147 74 HLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~ 91 (291)
+|++||||.+++++.+..
T Consensus 194 ~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred EEEEecchHHHHHHHHHH
Confidence 999999999999888865
No 147
>KOG2551|consensus
Probab=98.33 E-value=6.5e-06 Score=63.86 Aligned_cols=55 Identities=16% Similarity=0.294 Sum_probs=39.9
Q ss_pred ccccceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcceeecCcccc
Q psy17147 204 LRLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHFQWHNNPTVI 282 (291)
Q Consensus 204 ~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~~~~e~p~~~ 282 (291)
+++|.+ -+.|+.|.+++...+ +.|.+.- +.....-|| ||++.-.. .+
T Consensus 162 i~~PSL-Hi~G~~D~iv~~~~s----------------------------~~L~~~~~~a~vl~Hpg-gH~VP~~~--~~ 209 (230)
T KOG2551|consen 162 LSTPSL-HIFGETDTIVPSERS----------------------------EQLAESFKDATVLEHPG-GHIVPNKA--KY 209 (230)
T ss_pred CCCCee-EEecccceeecchHH----------------------------HHHHHhcCCCeEEecCC-CccCCCch--HH
Confidence 778998 888899988888777 5666665 777777887 99987554 44
Q ss_pred ccceecCC
Q psy17147 283 DQHVLPYL 290 (291)
Q Consensus 283 ~~~i~~fl 290 (291)
.+.|.+|+
T Consensus 210 ~~~i~~fi 217 (230)
T KOG2551|consen 210 KEKIADFI 217 (230)
T ss_pred HHHHHHHH
Confidence 44444443
No 148
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.30 E-value=6.4e-06 Score=66.73 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=77.1
Q ss_pred CCeEEEEcCCCCChhHHHHHH--HHHHHhCCCcEEEEecC-C------CCCCCcc-----hHHHHHHHHHHHHHHHHhcC
Q psy17147 4 YRPVLVIHGILSGNKTLEKFK--ERIERFHPGTKVVIPDN-Y------SNWASLE-----PMWNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~--~~L~~~~~g~~v~~~D~-~------G~g~S~~-----~~~~~~~~~~~~i~~~~~~~ 69 (291)
.|.||.+||-+++...++... +.|++.. ||-|+.+|- + +.+.+.. ...+.+..+.+.+..++.+.
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lAd~~-gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~ 139 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALADRE-GFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEY 139 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhhccc-CcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhc
Confidence 345788999999987666554 6676654 999999964 2 2233321 12456777888888888888
Q ss_pred C---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 70 P---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 70 ~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+ .+|++.|.|-||.++..++-.+|+. ..++..+++..
T Consensus 140 gidp~RVyvtGlS~GG~Ma~~lac~~p~~-faa~A~VAg~~ 179 (312)
T COG3509 140 GIDPARVYVTGLSNGGRMANRLACEYPDI-FAAIAPVAGLL 179 (312)
T ss_pred CcCcceEEEEeeCcHHHHHHHHHhcCccc-ccceeeeeccc
Confidence 7 5999999999999999999999997 88887775554
No 149
>KOG3847|consensus
Probab=98.19 E-value=2.4e-06 Score=69.44 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=70.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc------c---h------------------------
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL------E---P------------------------ 50 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~------~---~------------------------ 50 (291)
.|.|||.||++++-..|..+...|+.+ ||-|.+++.|.+..+. . +
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LASh--G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASH--GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhC--ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 567899999999999999999999997 9999999998765430 0 0
Q ss_pred -HHHHHHHHHHHHHH-----------------------HHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 51 -MWNQVLFFGSLVMK-----------------------MSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 51 -~~~~~~~~~~~i~~-----------------------~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
......+...++.- +...+. .++.++|||+||..+......+.+ .+..|++++
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~--FrcaI~lD~ 273 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD--FRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc--eeeeeeeee
Confidence 01112232222221 111223 578999999999999888877665 788888866
Q ss_pred CC
Q psy17147 106 PH 107 (291)
Q Consensus 106 ~~ 107 (291)
.+
T Consensus 274 WM 275 (399)
T KOG3847|consen 274 WM 275 (399)
T ss_pred ee
Confidence 54
No 150
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.15 E-value=1.6e-05 Score=65.09 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=60.6
Q ss_pred CCCeEEEEcCCCCChhHH--HHHHHHHHHh--CCCcEEEEecCCCCCCC---------------cchHHHH-HHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTL--EKFKERIERF--HPGTKVVIPDNYSNWAS---------------LEPMWNQ-VLFFGSLV 62 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~--~~~~~~L~~~--~~g~~v~~~D~~G~g~S---------------~~~~~~~-~~~~~~~i 62 (291)
..|.|+++||.......+ ....+.+... .+..-+++++..+.+.. ....... .+.+.++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 356788999983222222 2333333332 11234566666544410 0111222 24445555
Q ss_pred HHHHh-cCC---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 63 MKMSQ-NHP---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 63 ~~~~~-~~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
...++ +++ ++..|+|+||||+.|+.++.++|+. +.+++++++.
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~-F~~~~~~S~~ 149 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL-FGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT-ESEEEEESEE
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc-cccccccCcc
Confidence 44444 344 3379999999999999999999997 9999998654
No 151
>KOG1515|consensus
Probab=98.15 E-value=7e-05 Score=63.27 Aligned_cols=104 Identities=17% Similarity=0.086 Sum_probs=72.4
Q ss_pred CCeEEEEcCCCCC-----hhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc------CC-C
Q psy17147 4 YRPVLVIHGILSG-----NKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN------HP-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~-----~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~------~~-~ 71 (291)
.|.||++||.|-- +..+..+...++... +.-|+++|+|=.-.. +.+...+|..+++..+.++ .. +
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~-~~vvvSVdYRLAPEh--~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~ 166 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAEL-NCVVVSVDYRLAPEH--PFPAAYDDGWAALKWVLKNSWLKLGADPS 166 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHc-CeEEEecCcccCCCC--CCCccchHHHHHHHHHHHhHHHHhCCCcc
Confidence 4567999986642 467888888887765 899999999832222 2233445555555554443 23 8
Q ss_pred ceEEEEeChHHHHHHHHHHhCC-----CCCcceEEEecCCCCCc
Q psy17147 72 GIHLIGYSQGGLIARGILEQFP-----NHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p-----~~~v~~li~~~~~~~~~ 110 (291)
+++|+|-|-||.+|..++.+.- ..++++.|++-+...+.
T Consensus 167 rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 167 RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 8999999999999999987643 23489999997765553
No 152
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.15 E-value=1.6e-05 Score=65.80 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCCChhH--H----HHHHHHHHHhCCCcEEEEecCCCCCCCcchH--HHHHHHHHHHHHHHHhcC-C---
Q psy17147 3 RYRPVLVIHGILSGNKT--L----EKFKERIERFHPGTKVVIPDNYSNWASLEPM--WNQVLFFGSLVMKMSQNH-P--- 70 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~--~----~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~--~~~~~~~~~~i~~~~~~~-~--- 70 (291)
..+-++++-|.++.-+. . +.....+++.. +.+|+.+++||.|.|.... ..-+.++..-++.+.++- +
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~-~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka 214 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKEL-GANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKA 214 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHc-CCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCCh
Confidence 34568888888877655 1 12334444443 8899999999999996443 222344444444444422 2
Q ss_pred CceEEEEeChHHHHHHHHHHhCC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
+.+.+.|||+||.++..++.+..
T Consensus 215 ~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 215 KNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred heEEEeeccccHHHHHHHHHhcc
Confidence 78999999999999998777654
No 153
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.15 E-value=9.5e-06 Score=68.56 Aligned_cols=96 Identities=17% Similarity=0.241 Sum_probs=56.2
Q ss_pred CCeEEEEcCCCCChhHH------------------HHHHHHHHHhCCCcEEEEecCCCCCCCcc------h------H-H
Q psy17147 4 YRPVLVIHGILSGNKTL------------------EKFKERIERFHPGTKVVIPDNYSNWASLE------P------M-W 52 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~------------------~~~~~~L~~~~~g~~v~~~D~~G~g~S~~------~------~-~ 52 (291)
-|.||++||=+++.+.. ..+...|+++ ||-|+++|.+|.|.... . . .
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~--GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR--GYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT--TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC--CCEEEEEccccccccccccccccccchhHHHHH
Confidence 46789999987765321 1246678887 99999999999986411 0 0 0
Q ss_pred H-------------HHHHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 53 N-------------QVLFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 53 ~-------------~~~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
. ..++ ..+.+++..++ +++.++|+||||..++.++...+. |++.|..+.
T Consensus 193 ~~~l~lG~S~~G~~~~dd--mr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdR--Ika~v~~~~ 258 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDD--MRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDR--IKATVANGY 258 (390)
T ss_dssp HHHHHTT--HHHHHHHHH--HHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT----EEEEES-
T ss_pred HHHHHcCcCHHHHHHHHH--HHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchh--hHhHhhhhh
Confidence 0 0111 11333455554 789999999999999999998763 877776644
No 154
>COG3150 Predicted esterase [General function prediction only]
Probab=98.13 E-value=2.9e-06 Score=62.60 Aligned_cols=77 Identities=18% Similarity=0.019 Sum_probs=54.9
Q ss_pred EEEEcCCCCChhHHHHH--HHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHH
Q psy17147 7 VLVIHGILSGNKTLEKF--KERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGL 83 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~--~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ 83 (291)
|+.+|||.+|..+.+.. .+++... .|-.+.+............+.+..++.+.+ ....|||.|+||+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~----------~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY 71 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED----------VRDIEYSTPHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGY 71 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc----------ccceeeecCCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHH
Confidence 78999999998777754 3344432 222333322223345566777888888888 6689999999999
Q ss_pred HHHHHHHhCC
Q psy17147 84 IARGILEQFP 93 (291)
Q Consensus 84 ia~~~a~~~p 93 (291)
.|.+++.++.
T Consensus 72 ~At~l~~~~G 81 (191)
T COG3150 72 YATWLGFLCG 81 (191)
T ss_pred HHHHHHHHhC
Confidence 9999999987
No 155
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.13 E-value=1e-05 Score=67.55 Aligned_cols=83 Identities=24% Similarity=0.152 Sum_probs=58.3
Q ss_pred HHHHHHHhCCCcEEEEecCCCCCCCc---chHHHHHHHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHh----
Q psy17147 23 FKERIERFHPGTKVVIPDNYSNWASL---EPMWNQVLFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQ---- 91 (291)
Q Consensus 23 ~~~~L~~~~~g~~v~~~D~~G~g~S~---~~~~~~~~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~---- 91 (291)
++..+.++ ||-|+++|+.|-|... ....+.+-|.+++.+++....+ .++.++|||-||.-++..+..
T Consensus 18 ~l~~~L~~--GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~Y 95 (290)
T PF03583_consen 18 FLAAWLAR--GYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSY 95 (290)
T ss_pred HHHHHHHC--CCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHh
Confidence 34444454 9999999999988864 3335666677777776655322 689999999999988777643
Q ss_pred CCCCC--cceEEEecCCC
Q psy17147 92 FPNHN--VRNFISLSSPH 107 (291)
Q Consensus 92 ~p~~~--v~~li~~~~~~ 107 (291)
-|+.+ +.+.+..++|.
T Consensus 96 ApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 96 APELNRDLVGAAAGGPPA 113 (290)
T ss_pred CcccccceeEEeccCCcc
Confidence 46666 67777666554
No 156
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.11 E-value=9.1e-06 Score=65.68 Aligned_cols=101 Identities=20% Similarity=0.237 Sum_probs=61.3
Q ss_pred CeEEEEcCCCCChhHHH-HHHHHH---H---HhCCCcEEEEecCCC-CCCCcchHHHHHHHHHHHHH-HHHhcCC---Cc
Q psy17147 5 RPVLVIHGILSGNKTLE-KFKERI---E---RFHPGTKVVIPDNYS-NWASLEPMWNQVLFFGSLVM-KMSQNHP---EG 72 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~-~~~~~L---~---~~~~g~~v~~~D~~G-~g~S~~~~~~~~~~~~~~i~-~~~~~~~---~~ 72 (291)
|-|+|+||.+..+..=+ .+...+ . -++ ++-|+++.+-- +-.+............+.+. .+.++.. .+
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~ped-qcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sR 270 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPED-QCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSR 270 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccC-ceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcccce
Confidence 77899999988764332 221111 0 011 34455555332 22222221222334444444 3344444 79
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
++++|.|+||+.++.++.++|+. ..+.+.+++..
T Consensus 271 IYviGlSrG~~gt~al~~kfPdf-FAaa~~iaG~~ 304 (387)
T COG4099 271 IYVIGLSRGGFGTWALAEKFPDF-FAAAVPIAGGG 304 (387)
T ss_pred EEEEeecCcchhhHHHHHhCchh-hheeeeecCCC
Confidence 99999999999999999999997 88888886543
No 157
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.08 E-value=5.5e-06 Score=73.57 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHH-----------HHHH----hCCCcEEEEecCC-CCCCCcch---H----HHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKE-----------RIER----FHPGTKVVIPDNY-SNWASLEP---M----WNQVLFFG 59 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~-----------~L~~----~~~g~~v~~~D~~-G~g~S~~~---~----~~~~~~~~ 59 (291)
+.|.|++++|.+|++..+-.+.+ .+.. ...-.+++.+|.| |+|.|... . ....+++.
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~ 155 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMY 155 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHH
Confidence 35778999999998866532210 1111 0113588999975 88887421 1 22234444
Q ss_pred HHHHHHHhcC---C-CceEEEEeChHHHHHHHHHHhCC---------CCCcceEEEecCC
Q psy17147 60 SLVMKMSQNH---P-EGIHLIGYSQGGLIARGILEQFP---------NHNVRNFISLSSP 106 (291)
Q Consensus 60 ~~i~~~~~~~---~-~~~~lvGhS~GG~ia~~~a~~~p---------~~~v~~li~~~~~ 106 (291)
+.+..+..+. . .+++|+|||+||..+..+|.+.- .-+++++++.++.
T Consensus 156 ~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 156 NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 4444444333 3 79999999999999888887631 1247777776543
No 158
>KOG2369|consensus
Probab=98.04 E-value=9.1e-06 Score=69.94 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHhCCCcE------EEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHH
Q psy17147 18 KTLEKFKERIERFHPGTK------VVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 18 ~~~~~~~~~L~~~~~g~~------v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
..|..+++.|..- ||. -..+|+|-.-.........+..+...|+...+..+ +|++||+|||||++.++++.
T Consensus 124 ~~w~~~i~~lv~~--GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 124 WYWHELIENLVGI--GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHhh--CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 5899999999875 775 44678874333334445567777777777677777 99999999999999999999
Q ss_pred hCCCC-------CcceEEEecCCCCCcc
Q psy17147 91 QFPNH-------NVRNFISLSSPHGGQY 111 (291)
Q Consensus 91 ~~p~~-------~v~~li~~~~~~~~~~ 111 (291)
.+++. .|++++-+++|..|..
T Consensus 202 w~~~~~~~W~~k~I~sfvnig~p~lG~~ 229 (473)
T KOG2369|consen 202 WVEAEGPAWCDKYIKSFVNIGAPWLGSP 229 (473)
T ss_pred cccccchhHHHHHHHHHHccCchhcCCh
Confidence 98871 2788888888887755
No 159
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.98 E-value=0.00015 Score=64.48 Aligned_cols=105 Identities=15% Similarity=0.114 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCCChhHH---HHHHHHHHHhCCCcEEEEecCCCCCCCcchH------------HHHHHHHHHHHHHHHhc
Q psy17147 4 YRPVLVIHGILSGNKTL---EKFKERIERFHPGTKVVIPDNYSNWASLEPM------------WNQVLFFGSLVMKMSQN 68 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~---~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~------------~~~~~~~~~~i~~~~~~ 68 (291)
+-||+|.-|..++.... ..++..|++++ |--++++++|-+|.|.+.. .-.+.|++..+..+..+
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~-~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEF-GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHH-TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHc-CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 34676666666665322 23555666665 8899999999999994211 33467777777776655
Q ss_pred C---C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCc
Q psy17147 69 H---P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 69 ~---~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
. . .|++++|-|+||++|..+-.+||+. |.+.+.-++|....
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~-~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHL-FDGAWASSAPVQAK 151 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT--SEEEEET--CCHC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCe-eEEEEeccceeeee
Confidence 4 2 6899999999999999999999998 99999988887543
No 160
>KOG1553|consensus
Probab=97.95 E-value=2e-05 Score=65.08 Aligned_cols=95 Identities=19% Similarity=0.166 Sum_probs=62.5
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcc-hHHHHHHHHHHHHHHH-HhcCC---CceEEEEeC
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLE-PMWNQVLFFGSLVMKM-SQNHP---EGIHLIGYS 79 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~-~~~~~~~~~~~~i~~~-~~~~~---~~~~lvGhS 79 (291)
+-|||+-|..|-.+. .++..=.+. ||.|+.+++||++.|.. |.+......++.+.++ +..++ +.+++.|||
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~l--gYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQL--GYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHh--CceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 346777777664321 111111122 89999999999998842 3222222333333222 44454 889999999
Q ss_pred hHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 80 QGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 80 ~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
.||.-++.+|..||+ |+++|+-++
T Consensus 320 IGGF~~~waAs~YPd--VkavvLDAt 343 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD--VKAVVLDAT 343 (517)
T ss_pred cCCchHHHHhhcCCC--ceEEEeecc
Confidence 999999999999997 888887655
No 161
>KOG2281|consensus
Probab=97.93 E-value=6.1e-05 Score=67.06 Aligned_cols=101 Identities=21% Similarity=0.199 Sum_probs=71.6
Q ss_pred CCeEEEEcCCCCC-----hhHHHHH--HHHHHHhCCCcEEEEecCCCCCCC---cchH------HHHHHHHHHHHHHHHh
Q psy17147 4 YRPVLVIHGILSG-----NKTLEKF--KERIERFHPGTKVVIPDNYSNWAS---LEPM------WNQVLFFGSLVMKMSQ 67 (291)
Q Consensus 4 ~~~vvllHG~~~~-----~~~~~~~--~~~L~~~~~g~~v~~~D~~G~g~S---~~~~------~~~~~~~~~~i~~~~~ 67 (291)
.|+++++=|.++- +..|-.. ...|+.. ||-|+.+|.||.... .... ...++|.++.++-+.+
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl--Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL--GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhc--ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 5667777665552 1122111 2356665 999999999995433 1111 2246888999999888
Q ss_pred cCC----CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 68 NHP----EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 68 ~~~----~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+.+ +++.+-|||+||++++..+.++|+ |-++.+-|+|..
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~--IfrvAIAGapVT 762 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN--IFRVAIAGAPVT 762 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcc--eeeEEeccCcce
Confidence 886 899999999999999999999997 666666666653
No 162
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.92 E-value=2.7e-05 Score=69.33 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHhCCCcE-----EEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh
Q psy17147 18 KTLEKFKERIERFHPGTK-----VVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 18 ~~~~~~~~~L~~~~~g~~-----v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~ 91 (291)
..|..+++.|... ||. ...+|+|=...........+..+...|+......+ ++++||||||||.++++++..
T Consensus 156 ~vw~kLIe~L~~i--GY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARI--GYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHc--CCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4568999999986 775 22344441111111112223444444444444444 899999999999999999874
Q ss_pred CC-----------C---CCcceEEEecCCCCCcc
Q psy17147 92 FP-----------N---HNVRNFISLSSPHGGQY 111 (291)
Q Consensus 92 ~p-----------~---~~v~~li~~~~~~~~~~ 111 (291)
.. + ..|+++|.+++|..|..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 32 1 22899999999988754
No 163
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.90 E-value=0.00037 Score=58.70 Aligned_cols=101 Identities=12% Similarity=0.027 Sum_probs=69.3
Q ss_pred eEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCC--CC-------------------CCcc------------
Q psy17147 6 PVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYS--NW-------------------ASLE------------ 49 (291)
Q Consensus 6 ~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G--~g-------------------~S~~------------ 49 (291)
.||++||.+.+. .....+...|.++ |+..+++.+|. .. .+..
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~--GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDH--GWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhc--CceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 589999999985 4566777778776 99999988876 11 0000
Q ss_pred -hHHHHHHHHHHHHHH---HHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 50 -PMWNQVLFFGSLVMK---MSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 50 -~~~~~~~~~~~~i~~---~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
......+.+...|.+ +..+.+ ++++||||+.|+..+..++...+...+.++|++++-..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 001112233333333 344455 66999999999999999999988755999999977543
No 164
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.90 E-value=0.00016 Score=61.80 Aligned_cols=48 Identities=23% Similarity=0.202 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhcCC---C--ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 57 FFGSLVMKMSQNHP---E--GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 57 ~~~~~i~~~~~~~~---~--~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
|...++..+...++ . |++.+|+|.||++|...|.-.|.. +.+++=-++
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~-~~~~iDns~ 217 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL-FDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc-eeEEEecCc
Confidence 33444444444443 4 899999999999999999999997 877764433
No 165
>KOG3043|consensus
Probab=97.88 E-value=4.4e-05 Score=59.40 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=61.8
Q ss_pred CeEEEEcCCCCC-hhHHHHHHHHHHHhCCCcEEEEecCC-CCCCCcc--hH-----------HHHHHHHHHHHHHHHhcC
Q psy17147 5 RPVLVIHGILSG-NKTLEKFKERIERFHPGTKVVIPDNY-SNWASLE--PM-----------WNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 5 ~~vvllHG~~~~-~~~~~~~~~~L~~~~~g~~v~~~D~~-G~g~S~~--~~-----------~~~~~~~~~~i~~~~~~~ 69 (291)
+.||++--+.|- ...-+..+..++.+ ||.|+++|+. |--.+.. .. .....+....++.+..+-
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~--Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALN--GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcC--CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 345666544443 45688889999987 9999999984 4222211 10 222345555555544444
Q ss_pred C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 70 P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 70 ~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
. +++-++|.+|||-++..+....+. +.+.+++
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~~--f~a~v~~ 150 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDPE--FDAGVSF 150 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccchh--heeeeEe
Confidence 3 889999999999998888877773 6665554
No 166
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.84 E-value=0.00027 Score=61.98 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCeEEEEcCCCCCh-hHHHHHHHHHHHh--CCCcEEEEecCCCC-CCC--cchHHHHHHHHHHHHHHHHhcC-----C-C
Q psy17147 4 YRPVLVIHGILSGN-KTLEKFKERIERF--HPGTKVVIPDNYSN-WAS--LEPMWNQVLFFGSLVMKMSQNH-----P-E 71 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~~~~L~~~--~~g~~v~~~D~~G~-g~S--~~~~~~~~~~~~~~i~~~~~~~-----~-~ 71 (291)
.|.|+++||-.-.. ......++.|... .+-.-++.+|..+. .++ ........+.+.+.+.-.+++. . +
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~ 288 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDAD 288 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 56778899843211 1112333444332 11234667776321 121 1222333444555555555432 2 6
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+..|+|+||||+.|+.++.++|+. +.+++.+++.
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd~-Fg~v~s~Sgs 322 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPER-FGCVLSQSGS 322 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCccc-ccEEEEeccc
Confidence 788999999999999999999997 9999888653
No 167
>KOG3975|consensus
Probab=97.80 E-value=0.00037 Score=55.18 Aligned_cols=100 Identities=14% Similarity=0.009 Sum_probs=69.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCC-cEEEEecCCCCCCCc---ch-------HHHHHHHHHHHHHHHHh-cCC-
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPG-TKVVIPDNYSNWASL---EP-------MWNQVLFFGSLVMKMSQ-NHP- 70 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g-~~v~~~D~~G~g~S~---~~-------~~~~~~~~~~~i~~~~~-~~~- 70 (291)
.+-+++++|.+|....|.+++..|..+... .+++.+-..||-.-. .. ...++++.++-=.++++ ..+
T Consensus 29 ~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk 108 (301)
T KOG3975|consen 29 KPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPK 108 (301)
T ss_pred ceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCC
Confidence 345688999999999999999988776421 467787777765431 11 13344554444444444 444
Q ss_pred -CceEEEEeChHHHHHHHHHHhC-CCCCcceEEEe
Q psy17147 71 -EGIHLIGYSQGGLIARGILEQF-PNHNVRNFISL 103 (291)
Q Consensus 71 -~~~~lvGhS~GG~ia~~~a~~~-p~~~v~~li~~ 103 (291)
.+++++|||-|+++.++++... +..+|.+.+++
T Consensus 109 ~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 109 DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred CCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 7999999999999999999843 33347777776
No 168
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.77 E-value=0.0001 Score=55.49 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCC---CcceEEEecCCCCC
Q psy17147 57 FFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNH---NVRNFISLSSPHGG 109 (291)
Q Consensus 57 ~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~---~v~~li~~~~~~~~ 109 (291)
.+...+...+.+.+ .+++++|||+||.+|..++...... .+..++.+++|..+
T Consensus 13 ~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 13 LVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 33344444444456 8999999999999999999877542 37788888888765
No 169
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.75 E-value=6.8e-05 Score=58.88 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEE-EEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKV-VIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v-~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
..-||++.||+++...+..+. +.. ++.+ +++|+|.--. + . +-.+ +.++|||+|||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~---~~D~l~~yDYr~l~~---------d-----~----~~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPE---NYDVLICYDYRDLDF---------D-----F----DLSGYREIYLVAWSMG 67 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCC---CccEEEEecCccccc---------c-----c----ccccCceEEEEEEeHH
Confidence 456788999999988877653 122 3444 4678882111 0 0 1113 78999999999
Q ss_pred HHHHHHHHHhCCCCCcceEEEe-cCCC
Q psy17147 82 GLIARGILEQFPNHNVRNFISL-SSPH 107 (291)
Q Consensus 82 G~ia~~~a~~~p~~~v~~li~~-~~~~ 107 (291)
-.+|.++....| +...|.+ |++.
T Consensus 68 Vw~A~~~l~~~~---~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP---FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC---cceeEEEECCCC
Confidence 999988876543 6666666 4443
No 170
>KOG3253|consensus
Probab=97.72 E-value=0.00018 Score=63.69 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCC---CChhHHHHHHHHHHHhCCCcEEEEecCCC-CC-CCcchH-HHHHHHHHHHHHHHHhcCC-CceEE
Q psy17147 3 RYRPVLVIHGIL---SGNKTLEKFKERIERFHPGTKVVIPDNYS-NW-ASLEPM-WNQVLFFGSLVMKMSQNHP-EGIHL 75 (291)
Q Consensus 3 ~~~~vvllHG~~---~~~~~~~~~~~~L~~~~~g~~v~~~D~~G-~g-~S~~~~-~~~~~~~~~~i~~~~~~~~-~~~~l 75 (291)
..|.++++||.+ .++..+..+...|.....-..+-.+|++. .| .+.... .+.+.....-+.++--+++ .+++|
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiL 254 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIIL 254 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEE
Confidence 356678999988 12222222333343322134677788764 33 332221 2222222222334444566 89999
Q ss_pred EEeChHHHHHHHHHHhCCCCCcceEEEecCCCCC
Q psy17147 76 IGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~ 109 (291)
+|.|||+.++.+......+..|.++|+++-|...
T Consensus 255 vGrsmGAlVachVSpsnsdv~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 255 VGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT 288 (784)
T ss_pred EecccCceeeEEeccccCCceEEEEEEecccccC
Confidence 9999998888888776655448888888766543
No 171
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.58 E-value=0.00015 Score=58.99 Aligned_cols=102 Identities=17% Similarity=0.260 Sum_probs=61.4
Q ss_pred eEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC----CceEEEEeCh
Q psy17147 6 PVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP----EGIHLIGYSQ 80 (291)
Q Consensus 6 ~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~----~~~~lvGhS~ 80 (291)
|+|++=||.+.. .......+...+ +|++++.+-.+........ ..+...++.+...+.+.. .++.+-..|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~--~g~~il~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQD--PGFDILLVTSPPADFFWPS--KRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHh--cCCeEEEEeCCHHHHeeec--cchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 678888888765 455566666655 4999998876531111111 233444444444444433 2899999999
Q ss_pred HHHHHHHHHHh----C---CC--CCcceEEEecCCCCCcc
Q psy17147 81 GGLIARGILEQ----F---PN--HNVRNFISLSSPHGGQY 111 (291)
Q Consensus 81 GG~ia~~~a~~----~---p~--~~v~~li~~~~~~~~~~ 111 (291)
||...+..... . .. .+++++|+=++|..+..
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~ 116 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY 116 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc
Confidence 88776655441 1 11 12888887788876543
No 172
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.58 E-value=0.00014 Score=53.76 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCC-----CcceEEEecCCCCC
Q psy17147 54 QVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNH-----NVRNFISLSSPHGG 109 (291)
Q Consensus 54 ~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~-----~v~~li~~~~~~~~ 109 (291)
..+.+.+.+..+.++.+ .++++.|||+||.+|..++...... ..-.++.+++|..+
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcccc
Confidence 34567778888777777 8999999999999998888753221 14456666777654
No 173
>KOG2183|consensus
Probab=97.53 E-value=0.00064 Score=57.77 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=74.3
Q ss_pred CCeEEEEcCCCCChhHHHH---HHHHHHHhCCCcEEEEecCCCCCCCcc--hH-------------HHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEK---FKERIERFHPGTKVVIPDNYSNWASLE--PM-------------WNQVLFFGSLVMKM 65 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~---~~~~L~~~~~g~~v~~~D~~G~g~S~~--~~-------------~~~~~~~~~~i~~~ 65 (291)
+-||++--|..|+.+.+.. ++--++.+. +.-++..+.|-+|+|.+ .. ...+.|++..|..+
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~-~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPEL-KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhh-CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 3679999999988765543 222233333 56788899999998721 10 23457888888887
Q ss_pred HhcCC---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 66 SQNHP---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 66 ~~~~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.+.++ .+++.+|-|+||+++..+=.+||+. |.+...-++|.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi-v~GAlAaSAPv 202 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI-VLGALAASAPV 202 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhh-hhhhhhccCce
Confidence 77765 7999999999999999999999997 66666555554
No 174
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.53 E-value=0.0028 Score=48.55 Aligned_cols=54 Identities=19% Similarity=0.242 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcC-C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNH-P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~-~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
..+.+.+..+.... + ..+.++|||+|+.++-..+...+. .+..++++++|..+.
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~-~vddvv~~GSPG~g~ 147 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL-RVDDVVLVGSPGMGV 147 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC-CcccEEEECCCCCCC
Confidence 33344444433333 3 688999999999999998887444 499999999997664
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=97.44 E-value=0.00047 Score=57.91 Aligned_cols=102 Identities=20% Similarity=0.158 Sum_probs=59.9
Q ss_pred CeEEEEcCCCCChhHHH--HHHHHHHHhCCCcEEEEecC--------------CCCCCCcchH---------HHHHHH-H
Q psy17147 5 RPVLVIHGILSGNKTLE--KFKERIERFHPGTKVVIPDN--------------YSNWASLEPM---------WNQVLF-F 58 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~--~~~~~L~~~~~g~~v~~~D~--------------~G~g~S~~~~---------~~~~~~-~ 58 (291)
|.++++||..++...|. .-.+..++.. |..++.+|- .|.+.|.... .+..++ +
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~-g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADES-GWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhc-CeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 44577999998853332 2233344432 667777632 3444441111 123322 2
Q ss_pred HHHHHHHH-hcCC---C--ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 59 GSLVMKMS-QNHP---E--GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 59 ~~~i~~~~-~~~~---~--~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
.+.+-+++ ++.+ . +..++||||||.-|+.+|.++|++ ...+..+++...
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-f~~~sS~Sg~~~ 188 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-FKSASSFSGILS 188 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-hceecccccccc
Confidence 23333222 2333 2 788999999999999999999986 888877755543
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.44 E-value=0.00063 Score=61.53 Aligned_cols=101 Identities=15% Similarity=-0.002 Sum_probs=61.0
Q ss_pred CCeEEEEcCCCC---ChhHHHHHHHHHHHhCCCcEEEEecCC-C---CCCCc---chHHHHHHHHHHHHHHH---HhcCC
Q psy17147 4 YRPVLVIHGILS---GNKTLEKFKERIERFHPGTKVVIPDNY-S---NWASL---EPMWNQVLFFGSLVMKM---SQNHP 70 (291)
Q Consensus 4 ~~~vvllHG~~~---~~~~~~~~~~~L~~~~~g~~v~~~D~~-G---~g~S~---~~~~~~~~~~~~~i~~~---~~~~~ 70 (291)
.|.+|++||-+- +...+ ....|.....++-|+.+++| | +..+. .+.+..+.|....++.+ ++..+
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 466899999432 22221 22344443213899999998 4 22221 11233455555555444 44444
Q ss_pred ---CceEEEEeChHHHHHHHHHHhC--CCCCcceEEEecCCC
Q psy17147 71 ---EGIHLIGYSQGGLIARGILEQF--PNHNVRNFISLSSPH 107 (291)
Q Consensus 71 ---~~~~lvGhS~GG~ia~~~a~~~--p~~~v~~li~~~~~~ 107 (291)
+++.|+|+|.||.++..++... +.+ +.++|+++++.
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~l-f~~~i~~sg~~ 213 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGL-FHRAISQSGSA 213 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHH-HHHHhhhcCCc
Confidence 7999999999999998888763 234 88888885543
No 177
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.42 E-value=0.00049 Score=55.01 Aligned_cols=54 Identities=19% Similarity=0.213 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEeChHHHHHHHHHHhCCC---CCcceEEEecCCCC
Q psy17147 55 VLFFGSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQFPN---HNVRNFISLSSPHG 108 (291)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~---~~v~~li~~~~~~~ 108 (291)
-....+.++.+++..++++++.|||.||.+|.+++...++ .+|.++...++|..
T Consensus 68 q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3556677777777777779999999999999999998543 13889898888753
No 178
>KOG3967|consensus
Probab=97.42 E-value=0.002 Score=49.88 Aligned_cols=101 Identities=17% Similarity=0.234 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCCC-hhHHHH---------------HHHHHHHhCCCcEEEEecCCC---CCCCc-chH---HHHHHHHHH
Q psy17147 4 YRPVLVIHGILSG-NKTLEK---------------FKERIERFHPGTKVVIPDNYS---NWASL-EPM---WNQVLFFGS 60 (291)
Q Consensus 4 ~~~vvllHG~~~~-~~~~~~---------------~~~~L~~~~~g~~v~~~D~~G---~g~S~-~~~---~~~~~~~~~ 60 (291)
.+-+||+||-|-- +..|.. ++++-... ||.|++.+.-. +..+. .+. ...++...-
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~--Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE--GYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc--CCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3468999998764 245542 23333333 88998887532 22221 111 222333333
Q ss_pred HHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCC-CcceEEEecCC
Q psy17147 61 LVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNH-NVRNFISLSSP 106 (291)
Q Consensus 61 ~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~-~v~~li~~~~~ 106 (291)
....++.-.. +.+.+|.||.||...+.++.++|+. .|.++.+-.++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3333344444 8999999999999999999999872 37777776766
No 179
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.35 E-value=0.00062 Score=54.95 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCC----CCCcceEEEecCCCCC
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFP----NHNVRNFISLSSPHGG 109 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p----~~~v~~li~~~~~~~~ 109 (291)
++....+...+++.+ .++.+.||||||.+|..++.... .. .-.++.+++|..|
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~-~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGS-DVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCC-ceEEEEeCCCCCC
Confidence 444555555566666 88999999999999998887643 22 3456667777665
No 180
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.35 E-value=0.0022 Score=54.71 Aligned_cols=105 Identities=16% Similarity=0.066 Sum_probs=68.6
Q ss_pred CCeEEEEcCCCCChhHHHHH---HHHHHHhCCCcEEEEecCCCCC--CCcchHHHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLEKF---KERIERFHPGTKVVIPDNYSNW--ASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~---~~~L~~~~~g~~v~~~D~~G~g--~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
.|.||.+||.|-.......+ ...+....+...++++|+.-.. .-....+.++.+.++....+++..+ +.++|+|
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmG 201 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILMG 201 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 46678999976543222221 1222222345588888885432 1122335577888888888887777 9999999
Q ss_pred eChHHHHHHHHHHhCCC----CCcceEEEecCCCC
Q psy17147 78 YSQGGLIARGILEQFPN----HNVRNFISLSSPHG 108 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~----~~v~~li~~~~~~~ 108 (291)
=|.||.+++.+++.... .-.+++|+++|...
T Consensus 202 DSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 202 DSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred cCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 99999999988875332 12678888876543
No 181
>KOG4840|consensus
Probab=97.26 E-value=0.00044 Score=53.79 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=66.3
Q ss_pred CeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-----CceEEE
Q psy17147 5 RPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-----EGIHLI 76 (291)
Q Consensus 5 ~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-----~~~~lv 76 (291)
..|||+-|++..- .+-..+..+|.+. ++..+-+.++.+-.... ..++++-+++++.+++++. .+++++
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~--~wslVq~q~~Ssy~G~G--t~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDEN--SWSLVQPQLRSSYNGYG--TFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhc--cceeeeeeccccccccc--cccccccHHHHHHHHHHhhccCcccceEEE
Confidence 3588999998874 4556777888876 88888887763222111 1134455556666666443 589999
Q ss_pred EeChHHHHHHHHHHh-CCCCCcceEEEecCCCC
Q psy17147 77 GYSQGGLIARGILEQ-FPNHNVRNFISLSSPHG 108 (291)
Q Consensus 77 GhS~GG~ia~~~a~~-~p~~~v~~li~~~~~~~ 108 (291)
|||-|+.=.++|+.. ..++.+.+.|+.++...
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999999998843 23334777777665543
No 182
>KOG4372|consensus
Probab=97.25 E-value=0.00034 Score=59.38 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=57.9
Q ss_pred CeEEEEcCCCC-ChhHHHHHHHHHHHhCCCcEEEEecCCCC-CCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 5 RPVLVIHGILS-GNKTLEKFKERIERFHPGTKVVIPDNYSN-WASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 5 ~~vvllHG~~~-~~~~~~~~~~~L~~~~~g~~v~~~D~~G~-g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
.-||+.||+-+ +..+|...+.......++..++.....|. ..+......-=+..++++...+.... .++.+||||+|
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLG 160 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLG 160 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeecC
Confidence 45799999999 67899988888888777775555555542 22222221111334444555455555 79999999999
Q ss_pred HHHHHHHHHh
Q psy17147 82 GLIARGILEQ 91 (291)
Q Consensus 82 G~ia~~~a~~ 91 (291)
|+++..+...
T Consensus 161 GLvar~AIgy 170 (405)
T KOG4372|consen 161 GLVARYAIGY 170 (405)
T ss_pred CeeeeEEEEe
Confidence 9998776643
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.21 E-value=0.0041 Score=48.04 Aligned_cols=103 Identities=17% Similarity=0.262 Sum_probs=63.0
Q ss_pred EEEEcCCCCChh---HHHHHHHHHHHhCC--CcEEEEecCCCCCCC--c-chHHHHHHHHHHHHHHHHhcCC-CceEEEE
Q psy17147 7 VLVIHGILSGNK---TLEKFKERIERFHP--GTKVVIPDNYSNWAS--L-EPMWNQVLFFGSLVMKMSQNHP-EGIHLIG 77 (291)
Q Consensus 7 vvllHG~~~~~~---~~~~~~~~L~~~~~--g~~v~~~D~~G~g~S--~-~~~~~~~~~~~~~i~~~~~~~~-~~~~lvG 77 (291)
||+..|.+.... .-..+.+.++.... ...+..++++-.... . .....-..++.+.|.....+.+ .+++|+|
T Consensus 8 vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~G 87 (179)
T PF01083_consen 8 VIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAG 87 (179)
T ss_dssp EEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEE
T ss_pred EEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 566778777542 12344555655431 245555666642221 1 2234456777888888778888 8999999
Q ss_pred eChHHHHHHHHHHh--CCC---CCcceEEEecCCCCC
Q psy17147 78 YSQGGLIARGILEQ--FPN---HNVRNFISLSSPHGG 109 (291)
Q Consensus 78 hS~GG~ia~~~a~~--~p~---~~v~~li~~~~~~~~ 109 (291)
+|.|+.++..++.. .+. .+|.++++++.|...
T Consensus 88 YSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 88 YSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp ETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred cccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 99999999999887 222 239999999888754
No 184
>KOG3101|consensus
Probab=97.10 E-value=0.00065 Score=52.47 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=62.0
Q ss_pred CCeEEEEcCCCCChhHHH--HHHHHHHHhCCCcEEEEecC--CCC---CC--C--------------cchH--HHHH-HH
Q psy17147 4 YRPVLVIHGILSGNKTLE--KFKERIERFHPGTKVVIPDN--YSN---WA--S--------------LEPM--WNQV-LF 57 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~--~~~~~L~~~~~g~~v~~~D~--~G~---g~--S--------------~~~~--~~~~-~~ 57 (291)
-|.|.++-|+..+.+++- ...+..+.++ |+-|+.+|- ||. |. | ..+- .+.+ +.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~h-gl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKH-GLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhc-CeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 456788999999976654 3344445544 999999986 331 11 1 0111 2222 22
Q ss_pred HHHHHHHHHhc----CC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 58 FGSLVMKMSQN----HP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 58 ~~~~i~~~~~~----~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
+...+-++++. +. .++.|.||||||.-|+-.+.+.|.+ .+++-.+++.
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~k-ykSvSAFAPI 175 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSK-YKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCccc-ccceeccccc
Confidence 33444444442 22 5789999999999999999888874 5555444443
No 185
>PLN00413 triacylglycerol lipase
Probab=97.07 E-value=0.0019 Score=56.53 Aligned_cols=55 Identities=16% Similarity=0.227 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh---C-CC---CCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ---F-PN---HNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~---~-p~---~~v~~li~~~~~~~~~ 110 (291)
..+.+.++.++++.+ .++++.|||+||.+|..++.. + +. .++.++...|+|-.|.
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN 330 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGD 330 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCcc
Confidence 356677788888887 889999999999999988752 1 11 1256778888887764
No 186
>PLN02162 triacylglycerol lipase
Probab=97.02 E-value=0.0025 Score=55.61 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh---CCC----CCcceEEEecCCCCCcc
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ---FPN----HNVRNFISLSSPHGGQY 111 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~---~p~----~~v~~li~~~~~~~~~~ 111 (291)
..+.+.++.++.+.+ .++++.|||+||.+|..++.. ... .++.+++..|+|-.|..
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDE 325 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCH
Confidence 445566676677777 789999999999999887642 111 02557788888877643
No 187
>PLN02454 triacylglycerol lipase
Probab=96.98 E-value=0.0023 Score=55.25 Aligned_cols=54 Identities=22% Similarity=0.187 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcCC-C--ceEEEEeChHHHHHHHHHHhCC-------CCCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP-E--GIHLIGYSQGGLIARGILEQFP-------NHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~--~~~lvGhS~GG~ia~~~a~~~p-------~~~v~~li~~~~~~~~~ 110 (291)
+++...|..+++..+ . ++++.||||||.+|+.+|.... ..+| .++.+++|-.|.
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V-~~~TFGsPRVGN 273 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPV-TAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCce-EEEEeCCCcccC
Confidence 566777777777776 4 4999999999999999886431 2112 346778887663
No 188
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.93 E-value=0.013 Score=46.97 Aligned_cols=97 Identities=20% Similarity=0.040 Sum_probs=58.9
Q ss_pred CeEEEEcCCCCC---h---hHHHHHHHHHHHhCCCcEEEEecCCCCCCCc-chHHHHHHHHHHHHHHHHhcCC-----Cc
Q psy17147 5 RPVLVIHGILSG---N---KTLEKFKERIERFHPGTKVVIPDNYSNWASL-EPMWNQVLFFGSLVMKMSQNHP-----EG 72 (291)
Q Consensus 5 ~~vvllHG~~~~---~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~-~~~~~~~~~~~~~i~~~~~~~~-----~~ 72 (291)
.|.=++|=+||. + -.|+.+.+.|.++ ||.|++.=+.- +-.. .......+.+-..+..+.+..+ -+
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~--Gy~ViAtPy~~-tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADR--GYAVIATPYVV-TFDHQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhC--CcEEEEEecCC-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 345555645543 1 5889999999987 99999887742 2211 1112222333333444333322 36
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
++-||||||+-+-+.+...++.. -++-++++-
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~~-r~gniliSF 123 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDVE-RAGNILISF 123 (250)
T ss_pred eeeeecccchHHHHHHhhhccCc-ccceEEEec
Confidence 78899999999888888777653 455566643
No 189
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.91 E-value=0.0057 Score=55.83 Aligned_cols=100 Identities=14% Similarity=-0.057 Sum_probs=58.2
Q ss_pred CeEEEEcCCCCC--hh--HHHHHHHHHHHhCCCcEEEEecCC----CCCCC---cch-HHHHHHHHHHHHHHHHh---cC
Q psy17147 5 RPVLVIHGILSG--NK--TLEKFKERIERFHPGTKVVIPDNY----SNWAS---LEP-MWNQVLFFGSLVMKMSQ---NH 69 (291)
Q Consensus 5 ~~vvllHG~~~~--~~--~~~~~~~~L~~~~~g~~v~~~D~~----G~g~S---~~~-~~~~~~~~~~~i~~~~~---~~ 69 (291)
|.+|+|||-+-. +. ........+.++ ++=|+.+++| |+-.+ ..+ -+.-+.|...+++.+.+ +.
T Consensus 126 PV~v~ihGG~f~~G~~~~~~~~~~~~~~~~--~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 126 PVMVWIHGGGFMFGSGSFPPYDGASLAASK--DVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEE--STTTSSCTTSGGGHTHHHHHHH--TSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ceEEEeecccccCCCcccccccccccccCC--CEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 567999985432 12 233333445555 7899999987 22211 222 35566666666655544 45
Q ss_pred C---CceEEEEeChHHHHHHHHHHhC--CCCCcceEEEecCCC
Q psy17147 70 P---EGIHLIGYSQGGLIARGILEQF--PNHNVRNFISLSSPH 107 (291)
Q Consensus 70 ~---~~~~lvGhS~GG~ia~~~a~~~--p~~~v~~li~~~~~~ 107 (291)
| ++|.|.|||-||..+...+..- ..+ +.++|+.++..
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGL-FHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTS-BSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeeccccccc-ccccccccccc
Confidence 5 7899999999998877777652 234 99999996643
No 190
>PLN02408 phospholipase A1
Probab=96.81 E-value=0.0042 Score=52.93 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCC-C--ceEEEEeChHHHHHHHHHHhCC----CCCcceEEEecCCCCC
Q psy17147 56 LFFGSLVMKMSQNHP-E--GIHLIGYSQGGLIARGILEQFP----NHNVRNFISLSSPHGG 109 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~--~~~lvGhS~GG~ia~~~a~~~p----~~~v~~li~~~~~~~~ 109 (291)
+++.+.|..+++..+ . ++++.|||+||.+|..+|.... ..+.-.++.+++|-.|
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVG 242 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVG 242 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcc
Confidence 456677778787776 3 5899999999999988886532 2223446777888766
No 191
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.78 E-value=0.0028 Score=51.18 Aligned_cols=51 Identities=22% Similarity=0.271 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhc-CC---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 55 VLFFGSLVMKMSQN-HP---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 55 ~~~~~~~i~~~~~~-~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
.+.+.+.++-++++ +. ++..++|||+||++++.....+|+. +.+.+++++.
T Consensus 117 ~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~-F~~y~~~SPS 171 (264)
T COG2819 117 REFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDC-FGRYGLISPS 171 (264)
T ss_pred HHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcch-hceeeeecch
Confidence 45556666666665 32 6789999999999999999999996 8888877553
No 192
>KOG1202|consensus
Probab=96.76 E-value=0.0063 Score=58.53 Aligned_cols=93 Identities=19% Similarity=0.239 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC--cchHHHHHHHHHHHHHHHHhcCC--CceEEEE
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS--LEPMWNQVLFFGSLVMKMSQNHP--EGIHLIG 77 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S--~~~~~~~~~~~~~~i~~~~~~~~--~~~~lvG 77 (291)
+..||++|+|.+.|.....++++..|. .|-+|.- ..-..++++..+.....-+++.. .|+.++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle------------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE------------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC------------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 357899999999999988888877763 2223322 23336677777776655555554 8999999
Q ss_pred eChHHHHHHHHHHhCCCC-CcceEEEe-cCC
Q psy17147 78 YSQGGLIARGILEQFPNH-NVRNFISL-SSP 106 (291)
Q Consensus 78 hS~GG~ia~~~a~~~p~~-~v~~li~~-~~~ 106 (291)
+|+|+.++..+|....+. ....+|++ |+|
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999999765542 26668888 444
No 193
>PLN02571 triacylglycerol lipase
Probab=96.71 E-value=0.0036 Score=54.17 Aligned_cols=36 Identities=19% Similarity=0.069 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhcCC-C--ceEEEEeChHHHHHHHHHHh
Q psy17147 56 LFFGSLVMKMSQNHP-E--GIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~--~~~lvGhS~GG~ia~~~a~~ 91 (291)
+++...|..+++..+ . ++++.||||||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 667788888888776 3 68999999999999998875
No 194
>KOG2029|consensus
Probab=96.69 E-value=0.0066 Score=54.12 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=55.3
Q ss_pred HHHHhCCCcEEEEecCCCCC-------CCcc---hHHHHHHHHHHHHHHHHhcCC--CceEEEEeChHHHHHHHHHHhC-
Q psy17147 26 RIERFHPGTKVVIPDNYSNW-------ASLE---PMWNQVLFFGSLVMKMSQNHP--EGIHLIGYSQGGLIARGILEQF- 92 (291)
Q Consensus 26 ~L~~~~~g~~v~~~D~~G~g-------~S~~---~~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~~- 92 (291)
.|...+|+.|++.++++..= .+.. .......++.+.+.+ ...+ .+++.|||||||+++-.++..-
T Consensus 471 WLp~D~p~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~--~~VG~~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 471 WLPDDYPKSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQA--AGVGDDRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred cccccCccceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHH--hccCCCCceEEEecccchHHHHHHHHHHh
Confidence 45666788899988776421 1111 112223344444443 1223 7899999999999998887642
Q ss_pred ----CC-----CCcceEEEecCCCCCccCcc
Q psy17147 93 ----PN-----HNVRNFISLSSPHGGQYGSN 114 (291)
Q Consensus 93 ----p~-----~~v~~li~~~~~~~~~~~~~ 114 (291)
|+ .+..++|.++.|+.|+....
T Consensus 549 ~S~kP~ms~l~kNtrGiiFls~PHrGS~lA~ 579 (697)
T KOG2029|consen 549 CSSKPDMSNLNKNTRGIIFLSVPHRGSRLAG 579 (697)
T ss_pred hcCCchhhhhhccCCceEEEecCCCCCcccc
Confidence 22 35888999999999875433
No 195
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.60 E-value=0.0043 Score=48.57 Aligned_cols=59 Identities=15% Similarity=-0.004 Sum_probs=43.5
Q ss_pred cEEEEecCCCCCC-Ccc----h-----HHHHHHHHHHHHHHHHhcCC--CceEEEEeChHHHHHHHHHHhC
Q psy17147 34 TKVVIPDNYSNWA-SLE----P-----MWNQVLFFGSLVMKMSQNHP--EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 34 ~~v~~~D~~G~g~-S~~----~-----~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
.+|+++=+|-... +.. . ..-...|+.++...++++.+ ++++|+|||.|+.+.++++.+.
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4888887775221 111 1 12234778888888888886 7999999999999999999875
No 196
>PLN02310 triacylglycerol lipase
Probab=96.50 E-value=0.0086 Score=51.72 Aligned_cols=54 Identities=20% Similarity=0.201 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCC-----CceEEEEeChHHHHHHHHHHh----CCCCCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP-----EGIHLIGYSQGGLIARGILEQ----FPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-----~~~~lvGhS~GG~ia~~~a~~----~p~~~v~~li~~~~~~~~~ 110 (291)
+++.+.|..+++.++ .++.+.|||+||.+|+.+|.. .+.. .-.++.+|+|-.|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~-~v~vyTFGsPRVGN 251 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDL-FVSVISFGAPRVGN 251 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCc-ceeEEEecCCCccc
Confidence 455666777666542 479999999999999888854 3443 23477788887763
No 197
>KOG2182|consensus
Probab=96.47 E-value=0.023 Score=49.83 Aligned_cols=106 Identities=13% Similarity=0.037 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCCCChhHHH----HHHHHHHHhCCCcEEEEecCCCCCCCcchH------------HHHHHHHHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLE----KFKERIERFHPGTKVVIPDNYSNWASLEPM------------WNQVLFFGSLVMKMS 66 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~----~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~------------~~~~~~~~~~i~~~~ 66 (291)
++|..++|-|=+.-...|- ...-.+++++ |..|+.+++|-+|.|.+.. .-.+.|++..|+++-
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf-gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF-GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh-CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 4555566666555444442 1223344445 8899999999999873211 223466666666655
Q ss_pred hcCC--C--ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCc
Q psy17147 67 QNHP--E--GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 67 ~~~~--~--~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
.+.+ . |.+.+|-|+-|.++..+=+++|+. +.+.|.-++|....
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel-~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL-TVGSVASSAPVLAK 210 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchh-heeecccccceeEE
Confidence 5554 3 899999999999999999999998 88888887776543
No 198
>PLN02934 triacylglycerol lipase
Probab=96.46 E-value=0.0062 Score=53.77 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh---CCC----CCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ---FPN----HNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~---~p~----~~v~~li~~~~~~~~~ 110 (291)
+.+...++.++++.+ .++++.|||+||.+|..++.. ..+ .++..++..|+|-.|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVGN 367 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIGN 367 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCccC
Confidence 457777888888888 899999999999999988742 111 0134567778887664
No 199
>PLN02324 triacylglycerol lipase
Probab=96.43 E-value=0.0085 Score=51.83 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhcCC---CceEEEEeChHHHHHHHHHHhC--------------CCCCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP---EGIHLIGYSQGGLIARGILEQF--------------PNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~---~~~~lvGhS~GG~ia~~~a~~~--------------p~~~v~~li~~~~~~~~~ 110 (291)
+.+.+.|..+++.++ .++.+.|||+||.+|+..|... +.. .-.++.+|+|-.|.
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~-~V~v~TFGsPRVGN 267 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQV-PITVFAFGSPRIGD 267 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCC-ceEEEEecCCCcCC
Confidence 556677788888776 3699999999999999888642 111 12366678887663
No 200
>PLN02802 triacylglycerol lipase
Probab=96.32 E-value=0.0067 Score=53.57 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcCC---CceEEEEeChHHHHHHHHHHhCC----CCCcceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNHP---EGIHLIGYSQGGLIARGILEQFP----NHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~---~~~~lvGhS~GG~ia~~~a~~~p----~~~v~~li~~~~~~~~~ 110 (291)
+++.+.|..+++.++ .++++.|||+||.+|...|.... +.....++.+|+|-.|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGN 373 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCccc
Confidence 456667777777775 36899999999999998886532 21022467778887663
No 201
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.27 E-value=0.035 Score=47.49 Aligned_cols=85 Identities=18% Similarity=0.140 Sum_probs=59.0
Q ss_pred EEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHH
Q psy17147 8 LVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIAR 86 (291)
Q Consensus 8 vllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~ 86 (291)
||.-|=||=...=+++.+.|++. |+.|+.+|-.-+.=|.+.......|+.+.|.....+.+ .++.++|+|+|+=+.-
T Consensus 264 v~~SGDGGWr~lDk~v~~~l~~~--gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP 341 (456)
T COG3946 264 VFYSGDGGWRDLDKEVAEALQKQ--GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLP 341 (456)
T ss_pred EEEecCCchhhhhHHHHHHHHHC--CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhH
Confidence 44444333223334678889987 99999999654544555444555666666666666777 8999999999998877
Q ss_pred HHHHhCCC
Q psy17147 87 GILEQFPN 94 (291)
Q Consensus 87 ~~a~~~p~ 94 (291)
....+.|.
T Consensus 342 ~~~n~L~~ 349 (456)
T COG3946 342 FAYNRLPP 349 (456)
T ss_pred HHHHhCCH
Confidence 66666664
No 202
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.14 E-value=0.028 Score=46.28 Aligned_cols=101 Identities=18% Similarity=0.134 Sum_probs=60.0
Q ss_pred CCeEEEEcCCCC--ChhHHHHHHHHHHHh-CCCcEEEEecCCCC---CCCcchHHHHHHHHHHHHHHHHhcC------CC
Q psy17147 4 YRPVLVIHGILS--GNKTLEKFKERIERF-HPGTKVVIPDNYSN---WASLEPMWNQVLFFGSLVMKMSQNH------PE 71 (291)
Q Consensus 4 ~~~vvllHG~~~--~~~~~~~~~~~L~~~-~~g~~v~~~D~~G~---g~S~~~~~~~~~~~~~~i~~~~~~~------~~ 71 (291)
.|.+++.||-.- +...++.+-..+++. .+..-++.+|.-.- ..........+..+++.+.-.+++. +.
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~ 177 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADAD 177 (299)
T ss_pred ccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccCC
Confidence 456788887322 123333333334332 23445666665431 1112233445566666666555542 25
Q ss_pred ceEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
.-+|.|-|+||.+++..+..+|+. +..++..++
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~-FG~V~s~Sp 210 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPER-FGHVLSQSG 210 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchh-hceeeccCC
Confidence 678999999999999999999996 777666544
No 203
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.14 E-value=0.019 Score=49.25 Aligned_cols=53 Identities=21% Similarity=0.235 Sum_probs=40.2
Q ss_pred CchhhhcccccccceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcc
Q psy17147 195 NSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHF 273 (291)
Q Consensus 195 ~~~~~~~~~~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~ 273 (291)
++..|+..+ ++|.+ ++.+..|+...|..+. -...+.. ...+..+|+++|.
T Consensus 253 DP~~Y~~rL-~~PK~-ii~atgDeFf~pD~~~---------------------------~y~d~L~G~K~lr~vPN~~H~ 303 (367)
T PF10142_consen 253 DPYSYRDRL-TMPKY-IINATGDEFFVPDSSN---------------------------FYYDKLPGEKYLRYVPNAGHS 303 (367)
T ss_pred CHHHHHHhc-CccEE-EEecCCCceeccCchH---------------------------HHHhhCCCCeeEEeCCCCCcc
Confidence 345555555 89999 8888899998888775 3445544 7789999999999
Q ss_pred eee
Q psy17147 274 QWH 276 (291)
Q Consensus 274 ~~~ 276 (291)
...
T Consensus 304 ~~~ 306 (367)
T PF10142_consen 304 LIG 306 (367)
T ss_pred cch
Confidence 775
No 204
>KOG2237|consensus
Probab=96.14 E-value=0.014 Score=52.69 Aligned_cols=83 Identities=16% Similarity=0.130 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cc------hHHHHHHHHHHHHHHHHhcC---CCceEEEEeChHHHHH
Q psy17147 18 KTLEKFKERIERFHPGTKVVIPDNYSNWAS---LE------PMWNQVLFFGSLVMKMSQNH---PEGIHLIGYSQGGLIA 85 (291)
Q Consensus 18 ~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~------~~~~~~~~~~~~i~~~~~~~---~~~~~lvGhS~GG~ia 85 (291)
-.|..-.-.|.++ |.-....|.||.|.- .. ....+++|+..-.+.++.+- +++..+.|.|-||+++
T Consensus 486 p~f~~srl~lld~--G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLv 563 (712)
T KOG2237|consen 486 PSFRASRLSLLDR--GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLV 563 (712)
T ss_pred cccccceeEEEec--ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchh
Confidence 3555433344444 666667788986643 21 11446778877777766543 2889999999999999
Q ss_pred HHHHHhCCCCCcceEEEe
Q psy17147 86 RGILEQFPNHNVRNFISL 103 (291)
Q Consensus 86 ~~~a~~~p~~~v~~li~~ 103 (291)
..++...|++ +.++|+-
T Consensus 564 ga~iN~rPdL-F~avia~ 580 (712)
T KOG2237|consen 564 GACINQRPDL-FGAVIAK 580 (712)
T ss_pred HHHhccCchH-hhhhhhc
Confidence 9999999996 6665543
No 205
>PLN02719 triacylglycerol lipase
Probab=96.09 E-value=0.015 Score=51.47 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhcCC------CceEEEEeChHHHHHHHHHHhCCC---------C-CcceEEEecCCCCCcc
Q psy17147 56 LFFGSLVMKMSQNHP------EGIHLIGYSQGGLIARGILEQFPN---------H-NVRNFISLSSPHGGQY 111 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~------~~~~lvGhS~GG~ia~~~a~~~p~---------~-~v~~li~~~~~~~~~~ 111 (291)
+++...|..+++.++ .++.+.|||+||.+|...|...-. . ..-.++.+|+|-.|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 556667777776654 379999999999999988854311 0 0123667788876643
No 206
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.05 E-value=0.022 Score=50.55 Aligned_cols=56 Identities=20% Similarity=0.183 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCC-----CceEEEEeChHHHHHHHHHHh----CCCCCcceEEEecCCCCCcc
Q psy17147 56 LFFGSLVMKMSQNHP-----EGIHLIGYSQGGLIARGILEQ----FPNHNVRNFISLSSPHGGQY 111 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-----~~~~lvGhS~GG~ia~~~a~~----~p~~~v~~li~~~~~~~~~~ 111 (291)
+++.+.|..+++.+. .++.+.|||+||.+|+..|.. .++...-.++.+|+|-.|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~ 362 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNL 362 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCH
Confidence 345566777666543 469999999999999888854 34321234566788876643
No 207
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.03 E-value=0.053 Score=43.44 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=50.6
Q ss_pred CCcEEEEecCCCC-----CCCcchHHHHHHHHHHHHHHHHhc---CCCceEEEEeChHHHHHHHHHHhCCC-----CCcc
Q psy17147 32 PGTKVVIPDNYSN-----WASLEPMWNQVLFFGSLVMKMSQN---HPEGIHLIGYSQGGLIARGILEQFPN-----HNVR 98 (291)
Q Consensus 32 ~g~~v~~~D~~G~-----g~S~~~~~~~~~~~~~~i~~~~~~---~~~~~~lvGhS~GG~ia~~~a~~~p~-----~~v~ 98 (291)
||+.+..+++|.. |........++.+=++.+.+.+.. .+++++++|+|+|+.++...+.+.-+ ...-
T Consensus 1 p~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l 80 (225)
T PF08237_consen 1 PGYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDL 80 (225)
T ss_pred CCcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCce
Confidence 5788888888762 111223355666655556555554 44899999999999999888876422 1144
Q ss_pred eEEEecCCCC
Q psy17147 99 NFISLSSPHG 108 (291)
Q Consensus 99 ~li~~~~~~~ 108 (291)
.+|+++.|..
T Consensus 81 ~fVl~gnP~r 90 (225)
T PF08237_consen 81 SFVLIGNPRR 90 (225)
T ss_pred EEEEecCCCC
Confidence 6788877643
No 208
>KOG1551|consensus
Probab=96.02 E-value=0.006 Score=48.96 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=43.5
Q ss_pred CcEEEEecCCCCCCCcchH--HHHHH---HH----HHHHHHHHh------cCC-CceEEEEeChHHHHHHHHHHhCCCCC
Q psy17147 33 GTKVVIPDNYSNWASLEPM--WNQVL---FF----GSLVMKMSQ------NHP-EGIHLIGYSQGGLIARGILEQFPNHN 96 (291)
Q Consensus 33 g~~v~~~D~~G~g~S~~~~--~~~~~---~~----~~~i~~~~~------~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~ 96 (291)
+...+++.-+-+|....+. ...++ |+ +..|.+... ..+ .++.++|-||||.+|......++-.
T Consensus 141 ~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P- 219 (371)
T KOG1551|consen 141 EIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP- 219 (371)
T ss_pred cchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC-
Confidence 5667777777777764332 11111 11 222222221 335 8999999999999999999988864
Q ss_pred cceEEEe
Q psy17147 97 VRNFISL 103 (291)
Q Consensus 97 v~~li~~ 103 (291)
|.-+=++
T Consensus 220 va~~p~l 226 (371)
T KOG1551|consen 220 VATAPCL 226 (371)
T ss_pred ccccccc
Confidence 6555444
No 209
>PLN02753 triacylglycerol lipase
Probab=95.95 E-value=0.015 Score=51.73 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhcCC------CceEEEEeChHHHHHHHHHHhCCC---------CC-cceEEEecCCCCCc
Q psy17147 55 VLFFGSLVMKMSQNHP------EGIHLIGYSQGGLIARGILEQFPN---------HN-VRNFISLSSPHGGQ 110 (291)
Q Consensus 55 ~~~~~~~i~~~~~~~~------~~~~lvGhS~GG~ia~~~a~~~p~---------~~-v~~li~~~~~~~~~ 110 (291)
.+++.+.|..++++++ .++.+.|||+||.+|...|...-. .. .-.++.+|+|-.|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3556677777777653 489999999999999988853211 00 12467778887664
No 210
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.90 E-value=0.026 Score=47.99 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=32.1
Q ss_pred C-CceEEEEeChHHHHHHHHHHhCCCC---C-cceEEEecCCCCC
Q psy17147 70 P-EGIHLIGYSQGGLIARGILEQFPNH---N-VRNFISLSSPHGG 109 (291)
Q Consensus 70 ~-~~~~lvGhS~GG~ia~~~a~~~p~~---~-v~~li~~~~~~~~ 109 (291)
+ +|+.|||||+|+-+..+++....++ . |+.++++++|...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 5 7999999999999988877754432 1 8999999988755
No 211
>PLN02761 lipase class 3 family protein
Probab=95.87 E-value=0.017 Score=51.23 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhcC----C---CceEEEEeChHHHHHHHHHHhCCC----------CC-cceEEEecCCCCCc
Q psy17147 56 LFFGSLVMKMSQNH----P---EGIHLIGYSQGGLIARGILEQFPN----------HN-VRNFISLSSPHGGQ 110 (291)
Q Consensus 56 ~~~~~~i~~~~~~~----~---~~~~lvGhS~GG~ia~~~a~~~p~----------~~-v~~li~~~~~~~~~ 110 (291)
+++...|..+++.+ . .++.+.|||+||.+|...|...-. .. .-.++.+|+|-.|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 45667777777766 2 479999999999999988853211 00 12366678877663
No 212
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.81 E-value=0.02 Score=51.56 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=59.4
Q ss_pred HHHHhCCCcEEEEecCCCCCCCcchH---HH-HHHHHHHHHHHHHhcCC---CceEEEEeChHHHHHHHHHHhCCCCCcc
Q psy17147 26 RIERFHPGTKVVIPDNYSNWASLEPM---WN-QVLFFGSLVMKMSQNHP---EGIHLIGYSQGGLIARGILEQFPNHNVR 98 (291)
Q Consensus 26 ~L~~~~~g~~v~~~D~~G~g~S~~~~---~~-~~~~~~~~i~~~~~~~~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~ 98 (291)
.+..+ ||-|+..|.||.|.|.... .. ..+|-.+.|..+.+ .+ .+|..+|.|++|...+.+|...|-. ++
T Consensus 75 ~~aa~--GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~-QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa-Lk 150 (563)
T COG2936 75 WFAAQ--GYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAK-QPWSNGNVGMLGLSYLGFTQLAAAALQPPA-LK 150 (563)
T ss_pred eeecC--ceEEEEecccccccCCcccceeccccccchhHHHHHHHh-CCccCCeeeeecccHHHHHHHHHHhcCCch-he
Confidence 45555 9999999999999995432 22 45566666655444 44 8999999999999999999987765 78
Q ss_pred eEEEecCCCCC
Q psy17147 99 NFISLSSPHGG 109 (291)
Q Consensus 99 ~li~~~~~~~~ 109 (291)
+++...+....
T Consensus 151 ai~p~~~~~D~ 161 (563)
T COG2936 151 AIAPTEGLVDR 161 (563)
T ss_pred eeccccccccc
Confidence 88777665543
No 213
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.33 E-value=0.091 Score=39.53 Aligned_cols=100 Identities=17% Similarity=0.065 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCCCChhHHH------HHHHHHHHhCCCcEEEEecCCC-CCCC----cchHHHHHHHHHHHHHHHHh-cCC
Q psy17147 3 RYRPVLVIHGILSGNKTLE------KFKERIERFHPGTKVVIPDNYS-NWAS----LEPMWNQVLFFGSLVMKMSQ-NHP 70 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~------~~~~~L~~~~~g~~v~~~D~~G-~g~S----~~~~~~~~~~~~~~i~~~~~-~~~ 70 (291)
.+.|||+++--+|.-..++ .+++.+.+. .+-.+..-| -..| .......++.-...-.-+++ .++
T Consensus 25 aG~pVvvFpts~Grf~eyed~G~v~ala~fie~G----~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv~eEalp 100 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEG----LVQLFTLSGLDSESFLATHKNAADRAERHRAYERYVIEEALP 100 (227)
T ss_pred CCCcEEEEecCCCcchhhhhcccHHHHHHHHhcC----cEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHHHHhhcC
Confidence 4678888887777654444 345555543 444444443 2222 12223334333333333333 345
Q ss_pred CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.+..+-|-||||+.|..+.-++|+. ..++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~l-ftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHL-FTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhH-hhhheeeccee
Confidence 6677899999999999999999998 99999886554
No 214
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.19 E-value=0.16 Score=44.73 Aligned_cols=105 Identities=15% Similarity=0.089 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHH----HH--------Hh----CCCcEEEEecCC-CCCCCcc--h------HHHHHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKER----IE--------RF----HPGTKVVIPDNY-SNWASLE--P------MWNQVLF 57 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~----L~--------~~----~~g~~v~~~D~~-G~g~S~~--~------~~~~~~~ 57 (291)
+.|.||.+.|-+|+++.|-.+.+. +. .+ ..-.+++.+|.| |.|-|.. + .....++
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~ 118 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAED 118 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHHH
Confidence 456778899999998887543210 00 00 113588899955 8998831 1 2344566
Q ss_pred HHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHh----C-----CCCCcceEEEecCCC
Q psy17147 58 FGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQ----F-----PNHNVRNFISLSSPH 107 (291)
Q Consensus 58 ~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~----~-----p~~~v~~li~~~~~~ 107 (291)
+.+.+..+....+ .+++|.|-|+||..+-.+|.+ . +..+++++++.++..
T Consensus 119 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 119 LYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 6666666666654 599999999999776665543 2 134588888775543
No 215
>PLN02847 triacylglycerol lipase
Probab=94.75 E-value=0.052 Score=49.04 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=24.6
Q ss_pred HHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh
Q psy17147 60 SLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 60 ~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~ 91 (291)
..|...+...+ -+++++|||+||.+|..++..
T Consensus 239 ~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 239 PCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 34445555666 799999999999999887765
No 216
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.61 E-value=0.24 Score=43.91 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCCCChhHHHHHH---H-------------HHHHh----CCCcEEEEecC-CCCCCCcch-------HHHH
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFK---E-------------RIERF----HPGTKVVIPDN-YSNWASLEP-------MWNQ 54 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~---~-------------~L~~~----~~g~~v~~~D~-~G~g~S~~~-------~~~~ 54 (291)
+.|.|+.+.|.+|++..+-.+. + .|..+ ..-.+++.+|. .|.|-|... ....
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~ 144 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISE 144 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 3566788999988876442221 1 11100 11358888995 578877311 1233
Q ss_pred HHHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHhC---------CCCCcceEEEecCC
Q psy17147 55 VLFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQF---------PNHNVRNFISLSSP 106 (291)
Q Consensus 55 ~~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~~---------p~~~v~~li~~~~~ 106 (291)
.+++.+.+..++...+ .+++|.|.|+||..+-.+|.+. +.-+++++++.++.
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 4677777777776654 7899999999997666665532 12247788777553
No 217
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.42 E-value=0.2 Score=44.31 Aligned_cols=101 Identities=17% Similarity=0.027 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCC---ChhHHHHHHHHHHHhCCCcEEEEecCC-C-CCC----Ccc---h--HHHHHHHHHHHHHHH---H
Q psy17147 4 YRPVLVIHGILS---GNKTLEKFKERIERFHPGTKVVIPDNY-S-NWA----SLE---P--MWNQVLFFGSLVMKM---S 66 (291)
Q Consensus 4 ~~~vvllHG~~~---~~~~~~~~~~~L~~~~~g~~v~~~D~~-G-~g~----S~~---~--~~~~~~~~~~~i~~~---~ 66 (291)
.|.+|+|||-+= +...-..--..|+++- ++-|+.+++| | .|. +.. . .+.-+.|....++.+ +
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g-~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NI 172 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARG-DVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNI 172 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcC-CEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHH
Confidence 466799998542 2222112234577762 3888888886 2 221 111 1 122345555555444 4
Q ss_pred hcCC---CceEEEEeChHHHHHHHHHHhCCC---CCcceEEEecCCC
Q psy17147 67 QNHP---EGIHLIGYSQGGLIARGILEQFPN---HNVRNFISLSSPH 107 (291)
Q Consensus 67 ~~~~---~~~~lvGhS~GG~ia~~~a~~~p~---~~v~~li~~~~~~ 107 (291)
++.+ ..|.|+|+|-||+.++.++.. |. . +.++|+.+++.
T Consensus 173 e~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGL-F~rAi~~Sg~~ 217 (491)
T COG2272 173 EAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGL-FHRAIALSGAA 217 (491)
T ss_pred HHhCCCccceEEeeccchHHHHHHhhcC-ccchHH-HHHHHHhCCCC
Confidence 5565 789999999999988877764 44 3 77777775554
No 218
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.40 E-value=0.014 Score=40.62 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=40.0
Q ss_pred cccceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcceeecCccccc
Q psy17147 205 RLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHFQWHNNPTVID 283 (291)
Q Consensus 205 ~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~~~~e~p~~~~ 283 (291)
..|+| ++.++.|...+.... +.+.+.. +.+++.+++.||-.+...-.=+.
T Consensus 34 ~~piL-~l~~~~Dp~TP~~~a----------------------------~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPIL-VLGGTHDPVTPYEGA----------------------------RAMAARLPGSRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEE-EEecCcCCCCcHHHH----------------------------HHHHHHCCCceEEEEeccCcceecCCChHHH
Confidence 36666 777777776555444 6666665 89999999999999864334456
Q ss_pred cceecCC
Q psy17147 284 QHVLPYL 290 (291)
Q Consensus 284 ~~i~~fl 290 (291)
+.+.+||
T Consensus 85 ~~v~~yl 91 (103)
T PF08386_consen 85 KAVDDYL 91 (103)
T ss_pred HHHHHHH
Confidence 6666665
No 219
>KOG4569|consensus
Probab=94.25 E-value=0.1 Score=44.66 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhC----CC-CCcceEEEecCCCCC
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQF----PN-HNVRNFISLSSPHGG 109 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~----p~-~~v~~li~~~~~~~~ 109 (291)
+.+.+.+..++...+ -++.+-|||+||.+|..+|... .. ..-.+++..|.|-.|
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcc
Confidence 567778888888888 8999999999999998888642 11 114466667777655
No 220
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.20 E-value=0.03 Score=34.86 Aligned_cols=18 Identities=33% Similarity=0.654 Sum_probs=10.8
Q ss_pred CCCeEEEEcCCCCChhHH
Q psy17147 3 RYRPVLVIHGILSGNKTL 20 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~ 20 (291)
.++||+|.||+.+++..|
T Consensus 42 ~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T--EEEEE--TT--GGGG
T ss_pred CCCcEEEECCcccChHHH
Confidence 478899999999999888
No 221
>PLN02209 serine carboxypeptidase
Probab=94.18 E-value=0.11 Score=46.09 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCChhHHHHHHH----------------HHHHh----CCCcEEEEecC-CCCCCCcch-------HHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKE----------------RIERF----HPGTKVVIPDN-YSNWASLEP-------MWNQV 55 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~----------------~L~~~----~~g~~v~~~D~-~G~g~S~~~-------~~~~~ 55 (291)
.|.|+++.|.+|++..+-.+.+ .|..+ ..-.+++.+|. .|.|-|... .....
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a 147 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEV 147 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHH
Confidence 5667889999998866533221 11110 11357888895 578877311 12345
Q ss_pred HHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHhC---------CCCCcceEEEecCC
Q psy17147 56 LFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQF---------PNHNVRNFISLSSP 106 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~~---------p~~~v~~li~~~~~ 106 (291)
+++.+.+..+....+ .+++|.|.|+||..+-.+|... +.-+++++++.++.
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 677777777777665 5899999999997665555432 11247777777553
No 222
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.92 E-value=0.067 Score=48.13 Aligned_cols=95 Identities=16% Similarity=0.099 Sum_probs=60.0
Q ss_pred EEcCCCCCh----hHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cch------HHHHHHHHHHHHHHHHhcC-C--Cc
Q psy17147 9 VIHGILSGN----KTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEP------MWNQVLFFGSLVMKMSQNH-P--EG 72 (291)
Q Consensus 9 llHG~~~~~----~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~------~~~~~~~~~~~i~~~~~~~-~--~~ 72 (291)
++||.||-. ..+...+...-++ |.-.+..+.||.|.- ... .....+|++...+.++++- . ++
T Consensus 424 ll~aYGGF~vsltP~fs~~~~~WLer--Gg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~ 501 (648)
T COG1505 424 LLYAYGGFNISLTPRFSGSRKLWLER--GGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEK 501 (648)
T ss_pred EEEeccccccccCCccchhhHHHHhc--CCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHH
Confidence 456555532 2333333333343 667778899997753 111 1334677777777766543 2 78
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
+-+-|-|=||+++-..+.+.|+. +.+++ +..|.
T Consensus 502 lgi~GgSNGGLLvg~alTQrPel-fgA~v-~evPl 534 (648)
T COG1505 502 LGIQGGSNGGLLVGAALTQRPEL-FGAAV-CEVPL 534 (648)
T ss_pred hhhccCCCCceEEEeeeccChhh-hCcee-eccch
Confidence 99999999999999889999985 54444 44443
No 223
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.83 E-value=0.26 Score=41.88 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=49.3
Q ss_pred EEEEecCC-CCCCCcch-------HHHHHHHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHhC---------C
Q psy17147 35 KVVIPDNY-SNWASLEP-------MWNQVLFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQF---------P 93 (291)
Q Consensus 35 ~v~~~D~~-G~g~S~~~-------~~~~~~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~~---------p 93 (291)
+++.+|.| |.|-|... .....+++...+..+....+ .+++|.|-|+||..+-.+|.+. +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 78899988 78877321 12344777777877777665 7899999999997766666542 1
Q ss_pred CCCcceEEEecCC
Q psy17147 94 NHNVRNFISLSSP 106 (291)
Q Consensus 94 ~~~v~~li~~~~~ 106 (291)
.-+++++++.++.
T Consensus 83 ~inLkGi~IGNg~ 95 (319)
T PLN02213 83 PINLQGYMLGNPV 95 (319)
T ss_pred ceeeeEEEeCCCC
Confidence 1247777766543
No 224
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=93.65 E-value=0.12 Score=42.89 Aligned_cols=104 Identities=18% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecC----------CCCCCCcc---hHHHHH-----HHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDN----------YSNWASLE---PMWNQV-----LFFGSLVMKM 65 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~----------~G~g~S~~---~~~~~~-----~~~~~~i~~~ 65 (291)
-|.+++.||+++....-......+... ++.+...+. +|++.+.. ...... ......-...
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEK--GYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhc--eeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 456899999999987655566667665 777777764 22222211 000000 0000000111
Q ss_pred HhcCCCceEEEEeChHHHHHHHHHHhCCC-CCcceEEEecCCCCC
Q psy17147 66 SQNHPEGIHLIGYSQGGLIARGILEQFPN-HNVRNFISLSSPHGG 109 (291)
Q Consensus 66 ~~~~~~~~~lvGhS~GG~ia~~~a~~~p~-~~v~~li~~~~~~~~ 109 (291)
......+....|+++|+..+..++...+. .....++.++.+..+
T Consensus 127 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~ 171 (299)
T COG1073 127 LGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGG 171 (299)
T ss_pred HhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCc
Confidence 11112788899999999999999988863 114455555554443
No 225
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.45 E-value=0.16 Score=37.77 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=48.1
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHHH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIA 85 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia 85 (291)
-||.+-||+..++....++ +.+++ --++.+|+........- .+. +.+.+|++|||-.+|
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~--dl~lcYDY~dl~ldfDf---------sAy--------~hirlvAwSMGVwvA 71 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENH--DLLLCYDYQDLNLDFDF---------SAY--------RHIRLVAWSMGVWVA 71 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCC--cEEEEeehhhcCcccch---------hhh--------hhhhhhhhhHHHHHH
Confidence 4677889999887777663 33321 13457787733221110 001 346789999999999
Q ss_pred HHHHHhCCCCCcceEEEecC
Q psy17147 86 RGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 86 ~~~a~~~p~~~v~~li~~~~ 105 (291)
-++++..+ .++.+.+++
T Consensus 72 eR~lqg~~---lksatAiNG 88 (214)
T COG2830 72 ERVLQGIR---LKSATAING 88 (214)
T ss_pred HHHHhhcc---ccceeeecC
Confidence 99988775 666676643
No 226
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.28 E-value=0.62 Score=42.72 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=61.1
Q ss_pred EEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cc------hHHHHHHHHHHHHHHHHhcC-C--Cc
Q psy17147 7 VLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWAS---LE------PMWNQVLFFGSLVMKMSQNH-P--EG 72 (291)
Q Consensus 7 vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~------~~~~~~~~~~~~i~~~~~~~-~--~~ 72 (291)
++..=|.-|.+ ..+....=.|.++ |+-.-..--||.|.= .. ....++.|+.+..+.++++- . +.
T Consensus 451 lLygYGaYG~s~~p~Fs~~~lSLlDR--GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~ 528 (682)
T COG1770 451 LLYGYGAYGISMDPSFSIARLSLLDR--GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDR 528 (682)
T ss_pred EEEEeccccccCCcCcccceeeeecC--ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccc
Confidence 33333444433 3444333345555 554444455776542 11 11456788888888877653 3 78
Q ss_pred eEEEEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 73 IHLIGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
++++|-|-||++.-..+...|++ ..++|+-.+
T Consensus 529 i~a~GGSAGGmLmGav~N~~P~l-f~~iiA~VP 560 (682)
T COG1770 529 IVAIGGSAGGMLMGAVANMAPDL-FAGIIAQVP 560 (682)
T ss_pred eEEeccCchhHHHHHHHhhChhh-hhheeecCC
Confidence 99999999999999999999997 777776533
No 227
>KOG2385|consensus
Probab=91.46 E-value=0.41 Score=42.46 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=32.4
Q ss_pred cCC-CceEEEEeChHHHHHHHHHHhCCC-----CCcceEEEecCCCCC
Q psy17147 68 NHP-EGIHLIGYSQGGLIARGILEQFPN-----HNVRNFISLSSPHGG 109 (291)
Q Consensus 68 ~~~-~~~~lvGhS~GG~ia~~~a~~~p~-----~~v~~li~~~~~~~~ 109 (291)
.++ +|+.+||+|+|+-+..+++...-+ . |..++++|+|...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~i-IEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGI-IENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccc-eeeeeeccCCccC
Confidence 456 999999999999998877663222 3 8999999999854
No 228
>KOG4540|consensus
Probab=90.72 E-value=0.6 Score=38.29 Aligned_cols=47 Identities=26% Similarity=0.253 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 57 FFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 57 ~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
...+.+..+.+.++ .++.+-|||+||.+|..+..++.-. +|.+.+|.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP----~VaFesPG 308 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP----VVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc----eEEecCch
Confidence 34455566666777 8999999999999999888887643 24455554
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.72 E-value=0.6 Score=38.29 Aligned_cols=47 Identities=26% Similarity=0.253 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 57 FFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 57 ~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
...+.+..+.+.++ .++.+-|||+||.+|..+..++.-. +|.+.+|.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP----~VaFesPG 308 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP----VVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc----eEEecCch
Confidence 34455566666777 8999999999999999888887643 24455554
No 230
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.50 E-value=0.92 Score=40.34 Aligned_cols=104 Identities=16% Similarity=0.050 Sum_probs=62.0
Q ss_pred CCeEEEEcCCCCChhHHHHHHHH----HHHh-C-----------CCcEEEEec-CCCCCCCcc--hH--------HHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKER----IERF-H-----------PGTKVVIPD-NYSNWASLE--PM--------WNQVL 56 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~----L~~~-~-----------~g~~v~~~D-~~G~g~S~~--~~--------~~~~~ 56 (291)
.|.++.+.|-+|++..|-.+.+. +... . ..-.++-+| .-|.|.|.. +. ...++
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 55568899999999888766321 1110 0 023788888 457777742 11 22333
Q ss_pred HHHHHHHHHHhcCC---CceEEEEeChHHHHHHHHHHhCCCC--CcceEEEecCCC
Q psy17147 57 FFGSLVMKMSQNHP---EGIHLIGYSQGGLIARGILEQFPNH--NVRNFISLSSPH 107 (291)
Q Consensus 57 ~~~~~i~~~~~~~~---~~~~lvGhS~GG~ia~~~a~~~p~~--~v~~li~~~~~~ 107 (291)
.+.+.+.+...++. .+.+|+|-|+||.-+-.+|....++ ..++++.+.+..
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 44444444344444 5899999999998888888764431 245555554433
No 231
>KOG1516|consensus
Probab=89.23 E-value=0.65 Score=42.71 Aligned_cols=101 Identities=15% Similarity=-0.027 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCCC---hhHHH--HHHHHHHHhCCCcEEEEecCC----CC---CCCcchHHHHHHHHHHHHHHHH---hc
Q psy17147 4 YRPVLVIHGILSG---NKTLE--KFKERIERFHPGTKVVIPDNY----SN---WASLEPMWNQVLFFGSLVMKMS---QN 68 (291)
Q Consensus 4 ~~~vvllHG~~~~---~~~~~--~~~~~L~~~~~g~~v~~~D~~----G~---g~S~~~~~~~~~~~~~~i~~~~---~~ 68 (291)
-|.+|++||.+-. +..+. .....+..+ ..=|+.+.+| |+ |.+..+-+.-+.|+..+++.+. ..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~--~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLK--DVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccC--CEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 3668999986542 22231 122222222 3455566664 21 2222233444556655555544 44
Q ss_pred CC---CceEEEEeChHHHHHHHHHHhC--CCCCcceEEEecCCC
Q psy17147 69 HP---EGIHLIGYSQGGLIARGILEQF--PNHNVRNFISLSSPH 107 (291)
Q Consensus 69 ~~---~~~~lvGhS~GG~ia~~~a~~~--p~~~v~~li~~~~~~ 107 (291)
.+ +++.++|||.||..+-.++... ..+ ..++|.+++..
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~L-F~~aI~~SG~~ 232 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGL-FHKAISMSGNA 232 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHH-HHHHHhhcccc
Confidence 44 7999999999999887666521 123 66666664443
No 232
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.04 E-value=2.5 Score=37.57 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=57.3
Q ss_pred CCeE-EEEcCCCCChhHHHHH--HHHHHHhCCCcEEE-EecCCCCCCCcchH-HHHHHHHHHHHHHHHhcCC---CceEE
Q psy17147 4 YRPV-LVIHGILSGNKTLEKF--KERIERFHPGTKVV-IPDNYSNWASLEPM-WNQVLFFGSLVMKMSQNHP---EGIHL 75 (291)
Q Consensus 4 ~~~v-vllHG~~~~~~~~~~~--~~~L~~~~~g~~v~-~~D~~G~g~S~~~~-~~~~~~~~~~i~~~~~~~~---~~~~l 75 (291)
+||+ |.+-|+-. ++-++.+ ++.| |...+ .-|.|=.|.+..-- ..--+.+.+.|++-++.++ +.+++
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~L-----g~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLIL 361 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRL-----GAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLIL 361 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhc-----CCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeee
Confidence 3454 77888766 5555433 3333 44554 45888777774222 2223456777788888888 78999
Q ss_pred EEeChHHHHHHHHHHhCC
Q psy17147 76 IGYSQGGLIARGILEQFP 93 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p 93 (291)
-|-|||..-|+++++...
T Consensus 362 SGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 362 SGLSMGTFGALYYGAKLS 379 (511)
T ss_pred ccccccchhhhhhcccCC
Confidence 999999999999998764
No 233
>KOG1282|consensus
Probab=87.26 E-value=3 Score=37.16 Aligned_cols=104 Identities=14% Similarity=0.049 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCCChhHHHHHHH---H--------HHHh----CCCcEEEEecCC-CCCCCcc--------hHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKE---R--------IERF----HPGTKVVIPDNY-SNWASLE--------PMWNQVLFFG 59 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~---~--------L~~~----~~g~~v~~~D~~-G~g~S~~--------~~~~~~~~~~ 59 (291)
.|-||.+.|.+|.+..--.+.+ . |... .+-.+++.+|.| |.|-|.. ....+.++.-
T Consensus 73 dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~ 152 (454)
T KOG1282|consen 73 DPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNY 152 (454)
T ss_pred CCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHH
Confidence 4567889998887643311110 0 0000 012367777875 6776621 2245567788
Q ss_pred HHHHHHHhcCC----CceEEEEeChHHHHHHHHHHh----C-----CCCCcceEEEecCCC
Q psy17147 60 SLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQ----F-----PNHNVRNFISLSSPH 107 (291)
Q Consensus 60 ~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~----~-----p~~~v~~li~~~~~~ 107 (291)
+.+..+.++.+ .+++|.|-|++|..+-.+|++ . |.-+++++++.++..
T Consensus 153 ~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 153 EFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 88888888775 799999999999666666543 2 223477877665544
No 234
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=86.07 E-value=0.41 Score=41.45 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=70.3
Q ss_pred CCCeEEEEcCCCCChhHHH-HHHHHHHHhCCCcEEEEecCCCCCCCcc-hH---HHHHHHHHHHHHHHHh----cCCCce
Q psy17147 3 RYRPVLVIHGILSGNKTLE-KFKERIERFHPGTKVVIPDNYSNWASLE-PM---WNQVLFFGSLVMKMSQ----NHPEGI 73 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~-~~~~~L~~~~~g~~v~~~D~~G~g~S~~-~~---~~~~~~~~~~i~~~~~----~~~~~~ 73 (291)
+.|.|+..-|.+.+....+ +....| +-+-+.+++|-++.|.+ +. .-++.+.+.|...+.. -++++.
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll-----d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kW 136 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL-----DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKW 136 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh-----ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCc
Confidence 4677888889988764333 344444 23778999999999842 22 2234444444444444 345788
Q ss_pred EEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCC
Q psy17147 74 HLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHG 108 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~ 108 (291)
+--|-|=||+.++.+=.-||+. |.+.|...+|..
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~D-VD~tVaYVAP~~ 170 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDD-VDGTVAYVAPND 170 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCC-CCeeeeeecccc
Confidence 8999999999999998889998 999999877764
No 235
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=84.73 E-value=7.7 Score=26.68 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHHH-HHHHHHHHHHHhcCC-CceEEEEeChHH--HHHHHHHHhCC
Q psy17147 19 TLEKFKERIERFHPGTKVVIPDNYSNWASLEPM-WNQV-LFFGSLVMKMSQNHP-EGIHLIGYSQGG--LIARGILEQFP 93 (291)
Q Consensus 19 ~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~-~~~~-~~~~~~i~~~~~~~~-~~~~lvGhS~GG--~ia~~~a~~~p 93 (291)
.+..+.+.+..+ |+..=.+.++..|.+.... .... +.=...|..+++.++ .++++||=|--. -+-..++.++|
T Consensus 12 ly~~l~~Fl~~~--~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 12 LYPFLRDFLRRN--GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHhc--CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 445566666654 5655556666665543221 0011 344566788888899 899999988664 45566788999
Q ss_pred CCCcceEEE
Q psy17147 94 NHNVRNFIS 102 (291)
Q Consensus 94 ~~~v~~li~ 102 (291)
++ |.++.+
T Consensus 90 ~~-i~ai~I 97 (100)
T PF09949_consen 90 GR-ILAIYI 97 (100)
T ss_pred CC-EEEEEE
Confidence 97 877653
No 236
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=83.33 E-value=11 Score=31.38 Aligned_cols=106 Identities=15% Similarity=0.062 Sum_probs=70.2
Q ss_pred CCeEEEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchHHHHHHHHHHHHHHHHhcCCCceEEEEeChH
Q psy17147 4 YRPVLVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNWAS-LEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQG 81 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S-~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~G 81 (291)
.|.|+++--+.|+. ...+...+.|-- .-.|+.-||-....- ...-...++|+.+.+.+.++.++..+++++.+.-
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp---~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~~hv~aVCQP 179 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP---YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPDAHVMAVCQP 179 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc---ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence 34566676776664 555666666643 348899998643221 1122346789999999999999977999999887
Q ss_pred HHHHHH-----HHHhCCCCCcceEEEecCCCCCccCc
Q psy17147 82 GLIARG-----ILEQFPNHNVRNFISLSSPHGGQYGS 113 (291)
Q Consensus 82 G~ia~~-----~a~~~p~~~v~~li~~~~~~~~~~~~ 113 (291)
+.-.+. -+...|.. ...++++|+|......+
T Consensus 180 ~vPvLAAisLM~~~~~p~~-PssMtlmGgPIDaR~nP 215 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNV-PSSMTLMGGPIDARKNP 215 (415)
T ss_pred CchHHHHHHHHHhcCCCCC-CceeeeecCccccccCc
Confidence 643333 33345554 78899999988664443
No 237
>KOG1283|consensus
Probab=80.77 E-value=3.1 Score=34.92 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=53.0
Q ss_pred CeEEEEcCCCCCh----hHHHHH-----------HHHHHHhCCCcEEEEecCC-CCCCCcc--h--HHHHHHHHHHHHHH
Q psy17147 5 RPVLVIHGILSGN----KTLEKF-----------KERIERFHPGTKVVIPDNY-SNWASLE--P--MWNQVLFFGSLVMK 64 (291)
Q Consensus 5 ~~vvllHG~~~~~----~~~~~~-----------~~~L~~~~~g~~v~~~D~~-G~g~S~~--~--~~~~~~~~~~~i~~ 64 (291)
|-.+.+.|-.+.+ ..++++ ...|+.. .++.+|.| |.|.|.- . ...+.++++.++..
T Consensus 32 pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~a----dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 32 PLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDA----DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhc----cEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 3346677776654 244443 2234443 77888875 6777731 1 13344566666666
Q ss_pred HHhcC-------C-CceEEEEeChHHHHHHHHHHhC
Q psy17147 65 MSQNH-------P-EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 65 ~~~~~-------~-~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
+++.+ . .|++|+.-|+||-+|..++...
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 65532 3 7999999999999999888653
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=80.54 E-value=3 Score=37.63 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcC-C---CceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCC
Q psy17147 56 LFFGSLVMKMSQNH-P---EGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPH 107 (291)
Q Consensus 56 ~~~~~~i~~~~~~~-~---~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~ 107 (291)
.+++..-+++++++ + +.-+..|.|-||--++..|+++|+. ..+++..++..
T Consensus 96 h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~d-fDGIlAgaPA~ 150 (474)
T PF07519_consen 96 HETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPED-FDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhh-cCeEEeCCchH
Confidence 34444445555443 2 6788999999999999999999998 99999876655
No 239
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=79.82 E-value=23 Score=27.36 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 3 RYRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
..+.+|++-|+.|+. ..-..+.+.|.+. |++++.+|-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~--G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAK--GYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHc--CCeEEEecC
Confidence 456689999999986 3334566778776 999999985
No 240
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=78.72 E-value=0.54 Score=42.21 Aligned_cols=31 Identities=16% Similarity=0.241 Sum_probs=28.6
Q ss_pred CEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 261 KLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 261 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
+.+++.+.+|||++..++|+...+.+.+|+.
T Consensus 427 ~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 427 GFSFVQVYNAGHMVPMDQPAVALTMINRFLR 457 (462)
T ss_pred CeEEEEECCCCccChhhHHHHHHHHHHHHHc
Confidence 7999999999999999999999999988863
No 241
>KOG2521|consensus
Probab=78.68 E-value=9.5 Score=32.77 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=62.6
Q ss_pred CCeEEEEcCCCCChhHHH-HHHHHHHHhCCCcEEEEecCCCCCCCc--chHHHHHHHHHHHHHHHHhcCC---CceEEEE
Q psy17147 4 YRPVLVIHGILSGNKTLE-KFKERIERFHPGTKVVIPDNYSNWASL--EPMWNQVLFFGSLVMKMSQNHP---EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~-~~~~~L~~~~~g~~v~~~D~~G~g~S~--~~~~~~~~~~~~~i~~~~~~~~---~~~~lvG 77 (291)
.++||++=||.+..+.|. ......++. ||.++.+-.|-+-... .....+.....+.+..++.... .++++--
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~--g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDK--GYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcC--CceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEE
Confidence 348888889998876544 455555665 8999998887654332 1112233344444555444443 6788889
Q ss_pred eChHHHHHHHHH----HhC-CC--CCcceEEEecCCCCC
Q psy17147 78 YSQGGLIARGIL----EQF-PN--HNVRNFISLSSPHGG 109 (291)
Q Consensus 78 hS~GG~ia~~~a----~~~-p~--~~v~~li~~~~~~~~ 109 (291)
.|+||..++... .++ |. ....+++...+|...
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~ 154 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARS 154 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEecccccc
Confidence 999997665544 122 22 115557777666653
No 242
>KOG4388|consensus
Probab=76.77 E-value=8.3 Score=35.28 Aligned_cols=97 Identities=16% Similarity=0.032 Sum_probs=55.2
Q ss_pred EEEEcCCCCC---h----hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc---CC---Cce
Q psy17147 7 VLVIHGILSG---N----KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN---HP---EGI 73 (291)
Q Consensus 7 vvllHG~~~~---~----~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~---~~---~~~ 73 (291)
|+=+||.|-- + .+.+.++..| |+.++.+|+-=.-. .|.+..+++..-+.-.+++. ++ +++
T Consensus 399 i~HcHGGGfVAqsSkSHE~YLr~Wa~aL-----~cPiiSVdYSLAPE--aPFPRaleEv~fAYcW~inn~allG~TgEri 471 (880)
T KOG4388|consen 399 IVHCHGGGFVAQSSKSHEPYLRSWAQAL-----GCPIISVDYSLAPE--APFPRALEEVFFAYCWAINNCALLGSTGERI 471 (880)
T ss_pred EEEecCCceeeeccccccHHHHHHHHHh-----CCCeEEeeeccCCC--CCCCcHHHHHHHHHHHHhcCHHHhCcccceE
Confidence 4558886542 2 2333444444 88999999842222 22233344433333333332 33 899
Q ss_pred EEEEeChHHHHHHHHHHhCC---CCCcceEEEecCCCCCc
Q psy17147 74 HLIGYSQGGLIARGILEQFP---NHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~p---~~~v~~li~~~~~~~~~ 110 (291)
+++|-|-||.+.+..+.+.- -+...++++.=+|..-.
T Consensus 472 v~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q 511 (880)
T KOG4388|consen 472 VLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQ 511 (880)
T ss_pred EEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcc
Confidence 99999999987666665432 23367888775554433
No 243
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.46 E-value=31 Score=28.65 Aligned_cols=56 Identities=14% Similarity=0.120 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhcCC----CceEEEEeChHHHHHHHHHHh---CCCCCcceEEEecCCCCC
Q psy17147 53 NQVLFFGSLVMKMSQNHP----EGIHLIGYSQGGLIARGILEQ---FPNHNVRNFISLSSPHGG 109 (291)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~----~~~~lvGhS~GG~ia~~~a~~---~p~~~v~~li~~~~~~~~ 109 (291)
..-..+.+.|..-+..++ .++++.|-|+|++-+...... .-+. +.+.+..|+|...
T Consensus 87 ~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~-vdGalw~GpP~~s 149 (289)
T PF10081_consen 87 EAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDR-VDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhh-cceEEEeCCCCCC
Confidence 334555666666666665 579999999998776654433 3334 9999999998754
No 244
>PRK12467 peptide synthase; Provisional
Probab=73.25 E-value=9.5 Score=44.05 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=52.6
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cchHHHHHHHHHHHHHHHHhcCC-CceEEEEeCh
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQ 80 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~ 80 (291)
+.|++.|...++...+..+...+.. +..++.+..++.-.. ..........+++.+.. ..+ .+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~---~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~---~~~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG---DRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILW---QQAKGPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC---CCcEEEEeccccccccCCccchHHHHHHHHHHHHH---hccCCCeeeeeeec
Confidence 4599999988888777777777754 347777776653211 11212223334444432 233 6899999999
Q ss_pred HHHHHHHHHHh
Q psy17147 81 GGLIARGILEQ 91 (291)
Q Consensus 81 GG~ia~~~a~~ 91 (291)
||.++..++..
T Consensus 3767 g~~~a~~~~~~ 3777 (3956)
T PRK12467 3767 GGTLARLVAEL 3777 (3956)
T ss_pred chHHHHHHHHH
Confidence 99999888764
No 245
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=72.40 E-value=0.72 Score=40.63 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=26.9
Q ss_pred CCEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 260 GKLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 260 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
.+.++..+.+|||++..++|+...+.+.+||.
T Consensus 383 ~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 383 GNLTFVTVRGAGHMVPQDQPEAALQMFRRFLK 414 (415)
T ss_dssp TTEEEEEETT--SSHHHHSHHHHHHHHHHHHC
T ss_pred ccEEEEEEcCCcccChhhCHHHHHHHHHHHhc
Confidence 47999999999999999999999998888863
No 246
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=72.16 E-value=16 Score=28.69 Aligned_cols=44 Identities=18% Similarity=0.118 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCC--CCCCCc
Q psy17147 3 RYRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNY--SNWASL 48 (291)
Q Consensus 3 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~--G~g~S~ 48 (291)
..+|++++||-.... ..-..+.+.|.+. |.++...-++ ||+...
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~--g~~~~~~~~p~~gH~~~~ 191 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA--GKPVELLIFPGEGHGFGN 191 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT--TSSEEEEEETT-SSSTTS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc--CCCEEEEEcCcCCCCCCC
Confidence 368999999987763 4455667777776 5555544444 565543
No 247
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=71.31 E-value=4.2 Score=34.54 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=23.7
Q ss_pred HHHHHHhcCC-CceEEEEeChHHHHHHHHHH
Q psy17147 61 LVMKMSQNHP-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 61 ~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
.+..++++.+ ++-.++|||+|=+.|+.++.
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHCC
Confidence 3445567888 99999999999988877663
No 248
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=71.21 E-value=17 Score=34.17 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=30.9
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCC
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWAS 47 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S 47 (291)
.+|++++||..... ..-..+.+.|..+ |..|-..-+++.|.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~--g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRK--GKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHc--CceEEEEEeCCCCcC
Confidence 57899999988874 4555677788875 778777777764444
No 249
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=68.98 E-value=37 Score=29.49 Aligned_cols=83 Identities=12% Similarity=0.097 Sum_probs=53.8
Q ss_pred CeEEEEcCCCCC-------hhHHHHHHHHHHHhCCCcEEEEecC--CCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEE
Q psy17147 5 RPVLVIHGILSG-------NKTLEKFKERIERFHPGTKVVIPDN--YSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHL 75 (291)
Q Consensus 5 ~~vvllHG~~~~-------~~~~~~~~~~L~~~~~g~~v~~~D~--~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~l 75 (291)
..||++||=..+ .+.|..+++.+.++- -+-.+|. -|+|.. +++-+..++.++....+ .+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~---lip~~D~AYQGF~~G-------leeDa~~lR~~a~~~~~--~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG---LIPFFDIAYQGFADG-------LEEDAYALRLFAEVGPE--LL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC---Ceeeeehhhhhhccc-------hHHHHHHHHHHHHhCCc--EE
Confidence 358999976554 489999999999873 3445555 455443 34444555554444433 78
Q ss_pred EEeChHHHHHHHHHHhCCCCCcceEEEecC
Q psy17147 76 IGYSQGGLIARGILEQFPNHNVRNFISLSS 105 (291)
Q Consensus 76 vGhS~GG~ia~~~a~~~p~~~v~~li~~~~ 105 (291)
|..|+-=..++ |.++ |.++.+++.
T Consensus 240 va~S~SKnfgL-----YgER-VGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGER-VGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhc-cceeEEEeC
Confidence 88887654443 6776 999988844
No 250
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=67.24 E-value=7.1 Score=32.64 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=22.4
Q ss_pred HHHHhcCC-CceEEEEeChHHHHHHHHHH
Q psy17147 63 MKMSQNHP-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 63 ~~~~~~~~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
..++.+.+ ++-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 34456778 88899999999999887764
No 251
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=66.50 E-value=12 Score=31.23 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCC--CceEEEEeChHHHHHHHHHHhCC
Q psy17147 57 FFGSLVMKMSQNHP--EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 57 ~~~~~i~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
.+......+.+.+. ++++++|.|-|+..|..++....
T Consensus 76 ~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i~ 114 (277)
T PF09994_consen 76 RIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMID 114 (277)
T ss_pred HHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHHh
Confidence 34445555556665 88999999999999999998653
No 252
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=65.83 E-value=55 Score=25.75 Aligned_cols=63 Identities=8% Similarity=0.060 Sum_probs=44.0
Q ss_pred EEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeCh----HHHHHHHHHHhCCCCCcceEEEe
Q psy17147 35 KVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQ----GGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 35 ~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~----GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
+|+..|.++... ++.+.+++.+.+++++.+-.++++|+|. |..++-.+|.+..-.-+..++-+
T Consensus 79 ~V~~~~~~~~~~------~~~e~~a~al~~~i~~~~p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 79 RAILVSDRAFAG------ADTLATAKALAAAIKKIGVDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred EEEEEecccccC------CChHHHHHHHHHHHHHhCCCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 666665543222 2456777888887777677799999999 88999999988765325555555
No 253
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=65.75 E-value=8.3 Score=32.27 Aligned_cols=28 Identities=18% Similarity=0.118 Sum_probs=22.0
Q ss_pred HHHHhcCC-CceEEEEeChHHHHHHHHHH
Q psy17147 63 MKMSQNHP-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 63 ~~~~~~~~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
..++.+.+ ++..++|||+|=+.|+.++.
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 34455667 89999999999988887764
No 254
>PLN02209 serine carboxypeptidase
Probab=63.49 E-value=4.1 Score=36.36 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=25.4
Q ss_pred CEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 261 KLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 261 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
+.+|..+-+|||++. .+|+...+.+.+|+
T Consensus 404 ~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi 432 (437)
T PLN02209 404 KMTFATVKGGGHTAE-YLPEESSIMFQRWI 432 (437)
T ss_pred ceEEEEEcCCCCCcC-cCHHHHHHHHHHHH
Confidence 499999999999995 69999888888776
No 255
>COG3933 Transcriptional antiterminator [Transcription]
Probab=62.48 E-value=38 Score=30.05 Aligned_cols=70 Identities=11% Similarity=0.055 Sum_probs=48.3
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLI 84 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~i 84 (291)
.||+-||.. +++++..+++.|-+.- -+.++|+| ...+.+++.+.+.+.+++.. .+=.++=..||.+.
T Consensus 111 vIiiAHG~s-TASSmaevanrLL~~~---~~~aiDMP--------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL~ 178 (470)
T COG3933 111 VIIIAHGYS-TASSMAEVANRLLGEE---IFIAIDMP--------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSLT 178 (470)
T ss_pred EEEEecCcc-hHHHHHHHHHHHhhcc---ceeeecCC--------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchHH
Confidence 478899965 4677888888776653 67788988 22245566666766677776 55456778999876
Q ss_pred HHH
Q psy17147 85 ARG 87 (291)
Q Consensus 85 a~~ 87 (291)
...
T Consensus 179 ~f~ 181 (470)
T COG3933 179 SFG 181 (470)
T ss_pred HHH
Confidence 543
No 256
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=62.25 E-value=46 Score=27.44 Aligned_cols=73 Identities=18% Similarity=0.096 Sum_probs=45.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCc-EEEEecCCCC-CC-CcchHHHHHHHHHHHHHHHHhcCCCceEE-EE
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGT-KVVIPDNYSN-WA-SLEPMWNQVLFFGSLVMKMSQNHPEGIHL-IG 77 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~-~v~~~D~~G~-g~-S~~~~~~~~~~~~~~i~~~~~~~~~~~~l-vG 77 (291)
+.++||++--|..++.+.|...++.+.+. |. +++.+.. |. .. ........+ ..+..+.+..+-++.+ .+
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~--Gn~~i~l~~r-G~s~y~~~~~~~~dl----~~i~~lk~~~~~pV~~ds~ 202 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSS--GNGNVILCER-GIRTFEKATRNTLDL----SAVPVLKKETHLPIIVDPS 202 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHc--CCCcEEEEEC-CCCCCCCCCcCCcCH----HHHHHHHHhhCCCEEEcCC
Confidence 35789999999999999999999999875 44 5555443 32 11 111111111 1122323334567877 89
Q ss_pred eChH
Q psy17147 78 YSQG 81 (291)
Q Consensus 78 hS~G 81 (291)
||.|
T Consensus 203 Hs~G 206 (260)
T TIGR01361 203 HAAG 206 (260)
T ss_pred CCCC
Confidence 9988
No 257
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=61.61 E-value=5.9 Score=35.32 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=25.7
Q ss_pred CEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 261 KLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 261 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
+.+|..+-+|||++. .+|+.....+.+|+.
T Consensus 400 ~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~ 429 (433)
T PLN03016 400 KMTFATIKAGGHTAE-YRPNETFIMFQRWIS 429 (433)
T ss_pred ceEEEEEcCCCCCCC-CCHHHHHHHHHHHHc
Confidence 499999999999996 689998888887763
No 258
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=60.06 E-value=36 Score=27.82 Aligned_cols=39 Identities=10% Similarity=0.232 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCc-EEEEecCCC
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGT-KVVIPDNYS 43 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~-~v~~~D~~G 43 (291)
+.++||++--|...+.+.|...++++.+. |. +++.+ .||
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~--Gn~~i~L~-eRg 159 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDT--GKSNIILC-ERG 159 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHc--CCCeEEEE-ccc
Confidence 45889999999999999999999999875 54 44444 444
No 259
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=59.49 E-value=1.3e+02 Score=26.66 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=61.6
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC------------------c------chHHHHHHHHHHH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS------------------L------EPMWNQVLFFGSL 61 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S------------------~------~~~~~~~~~~~~~ 61 (291)
.|+++--+..-......+.+.+.+. |.+++.+|.--.+.+ . .+....++.+++.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~--G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQ--GVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHC--CCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 3444443333457888888888886 999999997322221 1 0113345556666
Q ss_pred HHHHHhcC----C-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 62 VMKMSQNH----P-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 62 i~~~~~~~----~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
...++.++ . .-++-+|-|.|..++...+...|-- +=++++-
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG-~PKlmVS 126 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIG-FPKLMVS 126 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCC-CCeEEEE
Confidence 55555544 2 5677899999999999999988863 5566554
No 260
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=59.30 E-value=55 Score=22.44 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL 48 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~ 48 (291)
.+|++++.+-......+.... .+++.+++-+++..+-.|||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~-~~~~~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGAR-AMAARLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHH-HHHHHCCCceEEEEeccCcceec
Confidence 478999999877765554433 34444556799999999999874
No 261
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=55.68 E-value=20 Score=31.04 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=32.0
Q ss_pred ccccceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcceee
Q psy17147 204 LRLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHFQWH 276 (291)
Q Consensus 204 ~~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~~~~ 276 (291)
+.+|.. ++.+..||..+|..+. -...+.. ..-+..+|+..|...-
T Consensus 328 LalpKy-ivnaSgDdff~pDsa~---------------------------lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 328 LALPKY-IVNASGDDFFVPDSAN---------------------------LYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred ccccce-eecccCCcccCCCccc---------------------------eeeccCCCceeeeeCCCCcchhhH
Confidence 568888 7888888888877664 3344444 5567889998898653
No 262
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=55.37 E-value=69 Score=28.23 Aligned_cols=86 Identities=8% Similarity=0.003 Sum_probs=47.6
Q ss_pred CeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCC--CCCCcchHHHHHHHHHHHHHHHHhc---CC-CceEE
Q psy17147 5 RPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYS--NWASLEPMWNQVLFFGSLVMKMSQN---HP-EGIHL 75 (291)
Q Consensus 5 ~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G--~g~S~~~~~~~~~~~~~~i~~~~~~---~~-~~~~l 75 (291)
.|||+++-+.... .....-+..|.+. |+.|+-+..-- +|........+.+++...+...+.. +. +++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~--G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDD--GYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHC--CcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 5788888655432 2445666777775 77776655311 2333222122345555555554433 44 66666
Q ss_pred EEe------------------ChHHHHHHHHHHhC
Q psy17147 76 IGY------------------SQGGLIARGILEQF 92 (291)
Q Consensus 76 vGh------------------S~GG~ia~~~a~~~ 92 (291)
-|- .||..+|..++.+.
T Consensus 191 t~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 191 TAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred ecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 665 36677777776644
No 263
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=55.19 E-value=35 Score=26.91 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVM 63 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~ 63 (291)
.+||+++||-.... ...+...+.|.+. |.+|-...++|-|-+..+ ..+.++.+.+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~--~~~v~~~~~~g~gH~i~~--~~~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA--GANVEFHEYPGGGHEISP--EELRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT--T-GEEEEEETT-SSS--H--HHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc--CCCEEEEEcCCCCCCCCH--HHHHHHHHHHh
Confidence 57899999998875 4456677888876 566666666655544322 23444444443
No 264
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=54.16 E-value=53 Score=26.34 Aligned_cols=73 Identities=15% Similarity=0.102 Sum_probs=46.2
Q ss_pred HHHHHhCCCcEEEEecCCCCCCCcch---HHHHHHHHHHHHHHHHhcCC---CceEEEEeChHHHH----HHHHHHhCCC
Q psy17147 25 ERIERFHPGTKVVIPDNYSNWASLEP---MWNQVLFFGSLVMKMSQNHP---EGIHLIGYSQGGLI----ARGILEQFPN 94 (291)
Q Consensus 25 ~~L~~~~~g~~v~~~D~~G~g~S~~~---~~~~~~~~~~~i~~~~~~~~---~~~~lvGhS~GG~i----a~~~a~~~p~ 94 (291)
+.|.+. +..|+..|+-|-...... .+.+++++.+-+.. +.+.+ -+-+.+|-+.|+.- |..++.+++
T Consensus 104 eklk~~--~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~-L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~- 179 (275)
T COG1856 104 EKLKEE--LVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLL-LKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE- 179 (275)
T ss_pred HHHHHh--cCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHH-HHHcCceeceeEEEEeccCcccchHHHHHHHhcCC-
Confidence 444443 678888888875544222 24567777777766 44444 56678999999854 666666664
Q ss_pred CCcceEEEe
Q psy17147 95 HNVRNFISL 103 (291)
Q Consensus 95 ~~v~~li~~ 103 (291)
+..+|+.
T Consensus 180 --~DalVl~ 186 (275)
T COG1856 180 --PDALVLV 186 (275)
T ss_pred --CCeEEEE
Confidence 4555554
No 265
>TIGR03586 PseI pseudaminic acid synthase.
Probab=53.08 E-value=84 Score=26.95 Aligned_cols=82 Identities=13% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeCh
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGT-KVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQ 80 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~-~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~ 80 (291)
+.++||++-=|+ .+...|...++++.+. |. +++.+.- -.+.+..... --...|..+.+..+-++-+..|+.
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~--g~~~i~LlhC---~s~YP~~~~~--~nL~~i~~lk~~f~~pVG~SDHt~ 203 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREA--GCKDLVLLKC---TSSYPAPLED--ANLRTIPDLAERFNVPVGLSDHTL 203 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHC--CCCcEEEEec---CCCCCCCccc--CCHHHHHHHHHHhCCCEEeeCCCC
Confidence 357899999999 5889999999999875 55 5555441 1111111111 112234444444556777889999
Q ss_pred HHHHHHHHHHh
Q psy17147 81 GGLIARGILEQ 91 (291)
Q Consensus 81 GG~ia~~~a~~ 91 (291)
|-.+++..+..
T Consensus 204 G~~~~~aAva~ 214 (327)
T TIGR03586 204 GILAPVAAVAL 214 (327)
T ss_pred chHHHHHHHHc
Confidence 97666555543
No 266
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=52.06 E-value=64 Score=27.66 Aligned_cols=83 Identities=8% Similarity=0.005 Sum_probs=50.2
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcE---EEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEe
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGTK---VVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGY 78 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~---v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 78 (291)
+.++|||+-=|+ .+...|...++.+.+. |.. ++.+- ...+.........+ ..|..+.+.++-++.+-+|
T Consensus 131 ~~gkPvilStGm-atl~Ei~~Av~~i~~~--G~~~~~i~llh-C~s~YP~~~~~~nL----~~I~~Lk~~f~~pVG~SdH 202 (329)
T TIGR03569 131 RFGKPVILSTGM-ATLEEIEAAVGVLRDA--GTPDSNITLLH-CTTEYPAPFEDVNL----NAMDTLKEAFDLPVGYSDH 202 (329)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHc--CCCcCcEEEEE-ECCCCCCCcccCCH----HHHHHHHHHhCCCEEECCC
Confidence 458899999998 5889999999999875 543 43332 22221111111111 2334444445557778899
Q ss_pred ChHHHHHHHHHHhC
Q psy17147 79 SQGGLIARGILEQF 92 (291)
Q Consensus 79 S~GG~ia~~~a~~~ 92 (291)
|.|-.++.......
T Consensus 203 t~G~~~~~aAvalG 216 (329)
T TIGR03569 203 TLGIEAPIAAVALG 216 (329)
T ss_pred CccHHHHHHHHHcC
Confidence 99977665555443
No 267
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=51.96 E-value=22 Score=30.06 Aligned_cols=27 Identities=19% Similarity=0.006 Sum_probs=21.8
Q ss_pred HhcCC-CceEEEEeChHHHHHHHHHHhC
Q psy17147 66 SQNHP-EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 66 ~~~~~-~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
+++.+ ..-.++|.|+|+.++..++...
T Consensus 37 Lee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 37 LEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 45557 6667899999999999998764
No 268
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=51.58 E-value=24 Score=30.00 Aligned_cols=19 Identities=32% Similarity=0.536 Sum_probs=16.6
Q ss_pred EEEEeChHHHHHHHHHHhC
Q psy17147 74 HLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~ 92 (291)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5899999999999999744
No 269
>PRK10279 hypothetical protein; Provisional
Probab=50.86 E-value=22 Score=30.04 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=22.0
Q ss_pred HhcCC-CceEEEEeChHHHHHHHHHHhC
Q psy17147 66 SQNHP-EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 66 ~~~~~-~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
+.+.+ ..-.++|.|+|+.++..+|...
T Consensus 27 L~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 27 LKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 45566 7778999999999999998754
No 270
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.58 E-value=1.4e+02 Score=24.65 Aligned_cols=73 Identities=16% Similarity=0.088 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCc-EEEEecCCCC-CCCcchHHHHHHHHHHHHHHHHhcCCCceEE-EEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGT-KVVIPDNYSN-WASLEPMWNQVLFFGSLVMKMSQNHPEGIHL-IGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~-~v~~~D~~G~-g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~l-vGhS 79 (291)
.+.||++--|..++.+.|...++.+... |- +++. =.||. ..+..+ ..+++- ..+..+.+..+-++.+ ..||
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~--Gn~~i~L-~~rG~~t~~~Y~-~~~vdl--~~i~~lk~~~~~pV~~D~sHs 206 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSE--GNENVVL-CERGIRTFETYT-RNTLDL--AAVAVIKELSHLPIIVDPSHA 206 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhc--CCCeEEE-EECCCCCCCCCC-HHHHHH--HHHHHHHhccCCCEEEeCCCc
Confidence 4789999999999999999999999875 44 4544 44553 122111 122222 2222222333556777 7999
Q ss_pred hH
Q psy17147 80 QG 81 (291)
Q Consensus 80 ~G 81 (291)
.|
T Consensus 207 ~G 208 (266)
T PRK13398 207 TG 208 (266)
T ss_pred cc
Confidence 98
No 271
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=50.56 E-value=1.3e+02 Score=26.20 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=50.9
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHh-CCCcEEEEecC-----------------CCCCCCcchHHHHH-HHHHHHHHHHH
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERF-HPGTKVVIPDN-----------------YSNWASLEPMWNQV-LFFGSLVMKMS 66 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~-~~g~~v~~~D~-----------------~G~g~S~~~~~~~~-~~~~~~i~~~~ 66 (291)
.|++-.|-+.+.......+..|... .|.|.|..++- || |.. .+....+ ..-.+.|++++
T Consensus 2 nVlVY~G~G~~~~sv~~~~~~Lr~~l~p~y~V~~v~~~~l~~~pw~~~~~LlV~PG-G~d-~~y~~~l~~~g~~~Ir~fV 79 (367)
T PF09825_consen 2 NVLVYNGPGTSPESVRHTLESLRRLLSPHYAVIPVTADELLNEPWQSKCALLVMPG-GAD-LPYCRSLNGEGNRRIRQFV 79 (367)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHhcCCCeEEEEeCHHHhhcCccccCCcEEEECC-Ccc-hHHHHhhChHHHHHHHHHH
Confidence 4777889999988888888888763 35788887753 33 221 1112222 22355666666
Q ss_pred hcCCCceEEEEeChHHHHHHHHH
Q psy17147 67 QNHPEGIHLIGYSQGGLIARGIL 89 (291)
Q Consensus 67 ~~~~~~~~lvGhS~GG~ia~~~a 89 (291)
++ +..+ +|.+.||+.+-...
T Consensus 80 ~~-GG~Y--lGiCAGaY~as~~~ 99 (367)
T PF09825_consen 80 EN-GGGY--LGICAGAYYASSRC 99 (367)
T ss_pred Hc-CCcE--EEECcchhhhccee
Confidence 66 4444 89999999887544
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=50.49 E-value=20 Score=29.76 Aligned_cols=21 Identities=19% Similarity=-0.051 Sum_probs=17.9
Q ss_pred CceEEEEeChHHHHHHHHHHh
Q psy17147 71 EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~ 91 (291)
.+-.++|||+|=+.|+.++..
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCC
Confidence 788999999999988887753
No 273
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=50.42 E-value=5 Score=34.13 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=25.2
Q ss_pred CEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 261 KLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 261 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
+.+|..+-+|||++. .+|+...+.+.+|+
T Consensus 286 ~ltf~~V~~AGHmV~-~qP~~al~m~~~fi 314 (319)
T PLN02213 286 KMTFATIKAGGHTAE-YRPNETFIMFQRWI 314 (319)
T ss_pred cceEEEEcCCCCCCC-cCHHHHHHHHHHHH
Confidence 499999999999996 59998888887776
No 274
>PRK11460 putative hydrolase; Provisional
Probab=50.31 E-value=86 Score=25.13 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=27.8
Q ss_pred CCCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCC--CCCC
Q psy17147 3 RYRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYS--NWAS 47 (291)
Q Consensus 3 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G--~g~S 47 (291)
..+||+++||-.... +.-..+.+.|.+. |.++...-++| |+-+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~--g~~~~~~~~~~~gH~i~ 194 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISL--GGDVTLDIVEDLGHAID 194 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHC--CCCeEEEEECCCCCCCC
Confidence 367899999988875 3444566777764 55555555554 5544
No 275
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=49.64 E-value=83 Score=27.83 Aligned_cols=73 Identities=8% Similarity=-0.014 Sum_probs=39.1
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCC--CCCCcchHHHHHHHHHHHHHHHHh--cCC-CceEE
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYS--NWASLEPMWNQVLFFGSLVMKMSQ--NHP-EGIHL 75 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G--~g~S~~~~~~~~~~~~~~i~~~~~--~~~-~~~~l 75 (291)
+.||++++-+.... .....-+..|.+. |+.++-+..-- +|......-...+++...+...+. .+. +++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~--G~~ii~P~~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSR--GVEIIGPASGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHC--CCEEECCCCccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 57888888654332 2344566777775 88887664311 333321112234455555554442 344 66666
Q ss_pred EEe
Q psy17147 76 IGY 78 (291)
Q Consensus 76 vGh 78 (291)
-|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 665
No 276
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=49.07 E-value=28 Score=26.41 Aligned_cols=32 Identities=13% Similarity=-0.025 Sum_probs=23.8
Q ss_pred HHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC
Q psy17147 62 VMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 62 i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
+++ +.+.+ ..-.++|-|.|+.++..++...+.
T Consensus 17 l~a-L~e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 17 AKA-LRERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHH-HHHcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 444 33345 667899999999999999986554
No 277
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=48.51 E-value=77 Score=25.15 Aligned_cols=50 Identities=18% Similarity=0.124 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHH--------HHHHhCCCCCcceEEEe
Q psy17147 54 QVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIAR--------GILEQFPNHNVRNFISL 103 (291)
Q Consensus 54 ~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~--------~~a~~~p~~~v~~li~~ 103 (291)
..++..+.|...++... -..+++-||+||..+- .+-..+|...+-.++++
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~il 164 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSIL 164 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE
T ss_pred cccccccccchhhccccccccceecccccceeccccccccchhhhccccccceeecccc
Confidence 34666667777666666 6778899999876432 22234666434444444
No 278
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.45 E-value=30 Score=26.73 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=23.6
Q ss_pred HHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 60 SLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 60 ~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
..++++ ++.+ ..-.++|-|.||.+|..++....
T Consensus 16 Gvl~~L-~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKAL-EEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHH-HHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 334443 3345 56679999999999999987554
No 279
>KOG1282|consensus
Probab=47.32 E-value=6.7 Score=35.04 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=27.0
Q ss_pred CEEEEeeCCCCcceeecCccccccceecCCC
Q psy17147 261 KLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291 (291)
Q Consensus 261 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 291 (291)
+..|..+.|+||++..++|+.....+..||.
T Consensus 416 ~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~ 446 (454)
T KOG1282|consen 416 GLTFATVRGAGHMVPYDKPESALIMFQRFLN 446 (454)
T ss_pred CEEEEEEeCCcccCCCCCcHHHHHHHHHHHc
Confidence 5888999999999999999988888777763
No 280
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=46.93 E-value=1.4e+02 Score=25.85 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=42.8
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC--cchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHH
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS--LEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLI 84 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S--~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~i 84 (291)
.++++|++.+.+.-+.+++.+... +..|=.+-+.-.|.+ ..+....++.+ .+++...+-+ +.+..|+|.=+
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l--~~~VnLIPynp~~~~~~~~ps~e~i~~f----~~~L~~~Gi~-vtvR~~~G~di 332 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGF--QSHVNLIPYNPIDEVEFQRPSPKRIQAF----QRVLEQRGVA-VSVRASRGLDA 332 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcC--CCeEEEecCCCCCCCCCCCCCHHHHHHH----HHHHHHCCCe-EEEeCCCCCch
Confidence 478999999999999999988764 334433333222332 22333333333 3334444533 35789998655
Q ss_pred HH
Q psy17147 85 AR 86 (291)
Q Consensus 85 a~ 86 (291)
..
T Consensus 333 ~a 334 (345)
T PRK14457 333 NA 334 (345)
T ss_pred hh
Confidence 44
No 281
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=46.76 E-value=47 Score=28.24 Aligned_cols=87 Identities=15% Similarity=0.124 Sum_probs=54.9
Q ss_pred CCeE-EEEcCCCCC----h-hHHHHHHHHHHHhCCCcEEEEecCCCCCCC--c------chH---------HHH-HHHHH
Q psy17147 4 YRPV-LVIHGILSG----N-KTLEKFKERIERFHPGTKVVIPDNYSNWAS--L------EPM---------WNQ-VLFFG 59 (291)
Q Consensus 4 ~~~v-vllHG~~~~----~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S--~------~~~---------~~~-~~~~~ 59 (291)
++.| +|+-|.... . .+--.+...|++. ++.+++++=-+|-|.- . +.. ... ...+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~-d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRA-DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcC-CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3444 555564332 2 4455566677763 4778887777775542 0 000 111 24566
Q ss_pred HHHHHHHhcCC--CceEEEEeChHHHHHHHHHHh
Q psy17147 60 SLVMKMSQNHP--EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 60 ~~i~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~ 91 (291)
.+...++.++. ++++++|+|-|+.+|.-+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 67777777775 899999999999999888864
No 282
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=46.15 E-value=25 Score=32.34 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=25.0
Q ss_pred HHHHH-hcCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 62 VMKMS-QNHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 62 i~~~~-~~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
+.+++ ++.+ ++-.++|||+|=+.|+..|--..
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 34445 5788 89999999999999988887553
No 283
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.00 E-value=39 Score=26.98 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=20.4
Q ss_pred cCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 68 NHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 68 ~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
+.+ +.-.++|-|.|+.++..++...+
T Consensus 24 e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 24 EMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 345 55679999999999999987543
No 284
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=43.78 E-value=2.4e+02 Score=25.27 Aligned_cols=99 Identities=14% Similarity=0.171 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEe--cC--------------------CCCCCCcchH---HH--
Q psy17147 3 RYRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIP--DN--------------------YSNWASLEPM---WN-- 53 (291)
Q Consensus 3 ~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~--D~--------------------~G~g~S~~~~---~~-- 53 (291)
.+|.||++-|+-|+. .+-..++.+|.++ |+.|..+ |. .+.+....|. ..
T Consensus 98 ~~P~vImmvGLQGsGKTTt~~KLA~~lkk~--~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al 175 (451)
T COG0541 98 KPPTVILMVGLQGSGKTTTAGKLAKYLKKK--GKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAAL 175 (451)
T ss_pred CCCeEEEEEeccCCChHhHHHHHHHHHHHc--CCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHH
Confidence 367889999999986 5666788888885 6666543 32 1211111111 00
Q ss_pred -------------------H-HHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC-CCcceEEEe
Q psy17147 54 -------------------Q-VLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN-HNVRNFISL 103 (291)
Q Consensus 54 -------------------~-~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~-~~v~~li~~ 103 (291)
. -+++-+.+.++.+... ..+.+|--||=|.-|...|..+.+ ..+.++|+-
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 0 1355666667666666 788999999999999999998876 348888875
No 285
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=43.67 E-value=1.2e+02 Score=21.87 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=15.8
Q ss_pred CCeEEEEcCCCCChhHHH--HHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLE--KFKERI 27 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~--~~~~~L 27 (291)
+|-|+-+||+.|+..++- -+++.|
T Consensus 52 KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 52 KPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 444566999999986664 344443
No 286
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=43.30 E-value=35 Score=28.29 Aligned_cols=27 Identities=11% Similarity=-0.036 Sum_probs=21.6
Q ss_pred HhcCC-CceEEEEeChHHHHHHHHHHhC
Q psy17147 66 SQNHP-EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 66 ~~~~~-~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
+++.+ ..-.++|.|+|+.++..+|...
T Consensus 32 LeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 32 LEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 45566 5557899999999999998764
No 287
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=43.14 E-value=2.1e+02 Score=24.40 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHHHHHHHHhCCC-CCc
Q psy17147 19 TLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQFPN-HNV 97 (291)
Q Consensus 19 ~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~-~~v 97 (291)
.++.+...+.+ +|.++.+|-+|........-..+..+.+.+..+....+...++|-.+.-|.-++.-+..+-. .++
T Consensus 185 v~~~l~~~~~~---~~D~ViIDTaGr~~~~~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~ 261 (318)
T PRK10416 185 AFDAIQAAKAR---GIDVLIIDTAGRLHNKTNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGL 261 (318)
T ss_pred HHHHHHHHHhC---CCCEEEEeCCCCCcCCHHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCC
Confidence 34444433332 78999999998765544332333333333333233334556777777777766666665432 236
Q ss_pred ceEEEe
Q psy17147 98 RNFISL 103 (291)
Q Consensus 98 ~~li~~ 103 (291)
.++|+-
T Consensus 262 ~giIlT 267 (318)
T PRK10416 262 TGIILT 267 (318)
T ss_pred CEEEEE
Confidence 677664
No 288
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=42.14 E-value=23 Score=29.12 Aligned_cols=14 Identities=29% Similarity=0.349 Sum_probs=12.0
Q ss_pred CceEEEEeChHHHH
Q psy17147 71 EGIHLIGYSQGGLI 84 (291)
Q Consensus 71 ~~~~lvGhS~GG~i 84 (291)
..++++|||+|..=
T Consensus 235 ~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 235 DEIIIYGHSLGEVD 248 (270)
T ss_pred CEEEEEeCCCchhh
Confidence 78999999999753
No 289
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=40.14 E-value=59 Score=21.11 Aligned_cols=42 Identities=21% Similarity=0.095 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 52 WNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 52 ~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
...+.++.+.++.--.-.+ +++-++|-|-|=.+|...+..+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 3445556666555222234 88999999999777777776653
No 290
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=39.37 E-value=47 Score=18.96 Aligned_cols=14 Identities=21% Similarity=0.235 Sum_probs=11.6
Q ss_pred CCcEEEEecCCCCC
Q psy17147 32 PGTKVVIPDNYSNW 45 (291)
Q Consensus 32 ~g~~v~~~D~~G~g 45 (291)
.+|.+..+|++|.-
T Consensus 12 ~~y~~~~pdlpg~~ 25 (48)
T PF03681_consen 12 GGYVAYFPDLPGCF 25 (48)
T ss_dssp SSEEEEETTCCTCE
T ss_pred CeEEEEeCCccChh
Confidence 37899999999854
No 291
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=39.31 E-value=2.1e+02 Score=23.21 Aligned_cols=38 Identities=16% Similarity=0.029 Sum_probs=25.9
Q ss_pred CCCeEEEEcCCCC--Chh-HHHHHHHHHHHhCCCcEEEEecCC
Q psy17147 3 RYRPVLVIHGILS--GNK-TLEKFKERIERFHPGTKVVIPDNY 42 (291)
Q Consensus 3 ~~~~vvllHG~~~--~~~-~~~~~~~~L~~~~~g~~v~~~D~~ 42 (291)
.++.|+|++=... +.. +.+.+.+.+.+. |+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~l--G~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPL--GIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHC--CCEEEEeccc
Confidence 3577999997663 333 344566677775 8888888765
No 292
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=39.22 E-value=1.1e+02 Score=26.71 Aligned_cols=73 Identities=16% Similarity=0.147 Sum_probs=44.0
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCc-EEEEecCCCC-CC-CcchHHHHHHHHHHHHHHHHhcCCCceEE-EE
Q psy17147 2 KRYRPVLVIHGILSGNKTLEKFKERIERFHPGT-KVVIPDNYSN-WA-SLEPMWNQVLFFGSLVMKMSQNHPEGIHL-IG 77 (291)
Q Consensus 2 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~-~v~~~D~~G~-g~-S~~~~~~~~~~~~~~i~~~~~~~~~~~~l-vG 77 (291)
+.+.||++--|...+.+.|...++.+... |. +++.+. ||. .. +.......+ ..|..+.+..+-++.+ ..
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~--Gn~~i~L~e-rg~s~yp~~~~~~ldl----~~i~~lk~~~~~PV~~d~~ 295 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQ--GNGQIILCE-RGIRTYEKATRNTLDI----SAVPILKQETHLPVMVDVT 295 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHC--CCCCEEEEC-CccCCCCCCCCCCcCH----HHHHHHHHHhCCCEEEeCC
Confidence 35789999999999999999999999875 44 455443 331 11 110111111 2223323334456776 79
Q ss_pred eChH
Q psy17147 78 YSQG 81 (291)
Q Consensus 78 hS~G 81 (291)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9987
No 293
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=39.11 E-value=47 Score=26.33 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=23.3
Q ss_pred HHHHHhcCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 62 VMKMSQNHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 62 i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
+++ +.+.+ ..-.++|.|.|+.+|..++...+
T Consensus 17 l~a-L~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKA-LAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHH-HHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 344 33345 55578999999999999998775
No 294
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=38.11 E-value=38 Score=28.21 Aligned_cols=62 Identities=32% Similarity=0.626 Sum_probs=42.5
Q ss_pred CcceEEEecCCCCCccCcc--cccccccc---chhhhcccchhhhhcccccccccccCceeEeecCC
Q psy17147 96 NVRNFISLSSPHGGQYGSN--QFGHFTED---ESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPG 157 (291)
Q Consensus 96 ~v~~li~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
+++++|++..+..+...+. .|.....+ ..+.++..+.++++++.++++++..+++.....++
T Consensus 194 ~L~~~Vlv~f~~D~~v~P~eSs~Fg~y~~~~~~~vipm~e~~lY~eD~iGLktLd~~gkl~f~~~~g 260 (279)
T PF02089_consen 194 KLEKFVLVGFPDDTVVVPKESSWFGFYDPGQDKEVIPMRETDLYKEDWIGLKTLDEAGKLHFLSVPG 260 (279)
T ss_dssp TSSEEEEEEETT-SSSSSGGGGGT-EE-TT-SS-EE-GGGSHHHHTTSSSHHHHHHTT-EEEEEESS
T ss_pred HhhheeEEecCCCcEEecCccccccccccccCceeecchhcccccccccCHHHHHhCCCeEEEeeCC
Confidence 3899999987776655533 13222221 34567778889999999999999999998888887
No 295
>PRK06849 hypothetical protein; Provisional
Probab=36.98 E-value=1e+02 Score=26.98 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=45.3
Q ss_pred CCCCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc-----------chHHHHHHHHHHHHHHHHhcC
Q psy17147 1 MKRYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL-----------EPMWNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 1 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~-----------~~~~~~~~~~~~~i~~~~~~~ 69 (291)
|+.++.|+++ | ++...-..+++.|.+. |++|+++|......+. .....+.+.+.+.+.+++++.
T Consensus 1 ~~~~~~VLI~-G--~~~~~~l~iar~l~~~--G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~ 75 (389)
T PRK06849 1 MNTKKTVLIT-G--ARAPAALELARLFHNA--GHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE 75 (389)
T ss_pred CCCCCEEEEe-C--CCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc
Confidence 5666777665 2 3333445677788886 9999999986433210 001122356777788877777
Q ss_pred CCceEEEEeC
Q psy17147 70 PEGIHLIGYS 79 (291)
Q Consensus 70 ~~~~~lvGhS 79 (291)
+-.+++-+.+
T Consensus 76 ~id~vIP~~e 85 (389)
T PRK06849 76 NIDLLIPTCE 85 (389)
T ss_pred CCCEEEECCh
Confidence 6556666655
No 296
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=36.93 E-value=19 Score=28.10 Aligned_cols=50 Identities=22% Similarity=0.271 Sum_probs=34.0
Q ss_pred cccceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhhcC---CEEEEeeCCCCcceeecCc
Q psy17147 205 RLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQG---KLVLISVPGVDHFQWHNNP 279 (291)
Q Consensus 205 ~~p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~gH~~~~e~p 279 (291)
+-..++.|-|+.||+..+.+.. +...|.... ..+.+..+|+||+.....+
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~-------------------------AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~ 185 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTH-------------------------AAHDLCTGLPADMKRHHLQPGVGHYGLFNGS 185 (202)
T ss_pred ccceeEEeecCcccCCcchHHH-------------------------HHHHHhcCCCHHHhhhcccCCCCeeecccch
Confidence 3344558999999998887753 113343332 4467788999999887764
No 297
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=36.69 E-value=49 Score=27.94 Aligned_cols=28 Identities=14% Similarity=0.055 Sum_probs=23.1
Q ss_pred HhcCC-CceEEEEeChHHHHHHHHHHhCC
Q psy17147 66 SQNHP-EGIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 66 ~~~~~-~~~~lvGhS~GG~ia~~~a~~~p 93 (291)
+++.+ ..-.|.|-|+|+.++..+|..+.
T Consensus 33 L~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 33 LEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 56667 77889999999999999987543
No 298
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.47 E-value=45 Score=28.28 Aligned_cols=27 Identities=15% Similarity=0.067 Sum_probs=20.3
Q ss_pred HHHhcC-C-CceEEEEeChHHHHHHHHHH
Q psy17147 64 KMSQNH-P-EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 64 ~~~~~~-~-~~~~lvGhS~GG~ia~~~a~ 90 (291)
.+.++. + ++.++.|||+|=+.|+..+.
T Consensus 76 ~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 76 VLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 334444 5 78899999999988887765
No 299
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=36.20 E-value=46 Score=28.09 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=15.1
Q ss_pred EEEEeChHHHHHHHHHH
Q psy17147 74 HLIGYSQGGLIARGILE 90 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~ 90 (291)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47999999999999875
No 300
>PTZ00445 p36-lilke protein; Provisional
Probab=36.11 E-value=66 Score=25.60 Aligned_cols=22 Identities=27% Similarity=0.507 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 18 KTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 18 ~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
+.-+.+.+.|.+. |+++++.|+
T Consensus 29 ~~~~~~v~~L~~~--GIk~Va~D~ 50 (219)
T PTZ00445 29 ESADKFVDLLNEC--GIKVIASDF 50 (219)
T ss_pred HHHHHHHHHHHHc--CCeEEEecc
Confidence 4556678888886 999999998
No 301
>PRK09461 ansA cytoplasmic asparaginase I; Provisional
Probab=35.93 E-value=1.1e+02 Score=26.26 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEE
Q psy17147 54 QVLFFGSLVMKMSQNHPEGIHLIG 77 (291)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~~~lvG 77 (291)
++++-+..+...+..+++|+++.|
T Consensus 93 TmeeTA~~L~~~l~~~~kPVVlTG 116 (335)
T PRK09461 93 TMAYTASALSFMLENLGKPVIVTG 116 (335)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEeC
Confidence 344444444333334445555444
No 302
>PF03283 PAE: Pectinacetylesterase
Probab=35.43 E-value=71 Score=27.82 Aligned_cols=32 Identities=28% Similarity=0.328 Sum_probs=23.1
Q ss_pred HHHHHHHhc-CC--CceEEEEeChHHHHHHHHHHh
Q psy17147 60 SLVMKMSQN-HP--EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 60 ~~i~~~~~~-~~--~~~~lvGhS~GG~ia~~~a~~ 91 (291)
..+..++.. ++ ++++|-|.|-||+-++..+..
T Consensus 142 avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 142 AVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 344444555 55 889999999999988776654
No 303
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=35.31 E-value=2e+02 Score=21.85 Aligned_cols=68 Identities=13% Similarity=0.072 Sum_probs=42.1
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLI 84 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~i 84 (291)
..|.| +|++...-+...+.|.+.+||.+++....+.+ .....+++++. +++.+..+++||-.....=
T Consensus 49 ~~ifl---lG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f------~~~~~~~i~~~----I~~~~pdiv~vglG~PkQE 115 (172)
T PF03808_consen 49 KRIFL---LGGSEEVLEKAAANLRRRYPGLRIVGYHHGYF------DEEEEEAIINR----INASGPDIVFVGLGAPKQE 115 (172)
T ss_pred CeEEE---EeCCHHHHHHHHHHHHHHCCCeEEEEecCCCC------ChhhHHHHHHH----HHHcCCCEEEEECCCCHHH
Confidence 34555 35566777788889999999999886655533 11122333333 4455567888887776544
Q ss_pred H
Q psy17147 85 A 85 (291)
Q Consensus 85 a 85 (291)
-
T Consensus 116 ~ 116 (172)
T PF03808_consen 116 R 116 (172)
T ss_pred H
Confidence 3
No 304
>COG0218 Predicted GTPase [General function prediction only]
Probab=35.27 E-value=1e+02 Score=24.29 Aligned_cols=16 Identities=13% Similarity=-0.091 Sum_probs=12.4
Q ss_pred EEEecCCCCCCCcchH
Q psy17147 36 VVIPDNYSNWASLEPM 51 (291)
Q Consensus 36 v~~~D~~G~g~S~~~~ 51 (291)
...+|+||+|...-+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 6788999999875443
No 305
>PLN02633 palmitoyl protein thioesterase family protein
Probab=35.26 E-value=34 Score=28.95 Aligned_cols=61 Identities=33% Similarity=0.582 Sum_probs=46.4
Q ss_pred cceEEEecCCCCCccCcc--cccccccc---chhhhcccchhhhhcccccccccccCceeEeecCC
Q psy17147 97 VRNFISLSSPHGGQYGSN--QFGHFTED---ESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPG 157 (291)
Q Consensus 97 v~~li~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
++++|++..+..+...+. .|....-+ ..+.++..+..+++++.++++++..+++.+...++
T Consensus 211 L~~~Vlv~f~~DtvV~PkeSswFg~Y~~~~~~~vvpl~et~lY~eD~iGLktLD~~GkL~f~~v~G 276 (314)
T PLN02633 211 LQNLVLVKFQNDTVIVPKDSSWFGFYPDGEFEHLLSVQQTKLYTEDWIGLKTLDDAGKVKFVSVPG 276 (314)
T ss_pred hhceEEEecCCCceECCCccccceeccCCCCceeechhhcchhhhhhhhHHHHHHCCCeEEEecCC
Confidence 788999988877755532 13333211 35677888889999999999999999999999988
No 306
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=34.74 E-value=92 Score=23.56 Aligned_cols=22 Identities=14% Similarity=0.099 Sum_probs=18.5
Q ss_pred CceEEEEeChHHHHHHHHHHhC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
..-.++|-|.|+.+|..++...
T Consensus 28 ~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 28 PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CeeEEEEECHHHHHHHHHHcCC
Confidence 5557999999999999998654
No 307
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.39 E-value=71 Score=24.27 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=23.3
Q ss_pred HHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC
Q psy17147 61 LVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 61 ~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
.++.+ .+.+ ..-.++|.|.|+.++..++...+.
T Consensus 18 vl~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 18 VLRAL-EEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 34443 3345 555789999999999999876543
No 308
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=33.63 E-value=2.1e+02 Score=21.53 Aligned_cols=45 Identities=22% Similarity=0.214 Sum_probs=23.9
Q ss_pred CCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHH
Q psy17147 32 PGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGL 83 (291)
Q Consensus 32 ~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ 83 (291)
+|-.|+++|.+|--.| .+++++.+..+.+.-.+-.++||-|.|=-
T Consensus 66 ~~~~vi~Ld~~Gk~~s-------Se~fA~~l~~~~~~G~~i~f~IGG~~Gl~ 110 (155)
T COG1576 66 KGSYVVLLDIRGKALS-------SEEFADFLERLRDDGRDISFLIGGADGLS 110 (155)
T ss_pred CCCeEEEEecCCCcCC-------hHHHHHHHHHHHhcCCeEEEEEeCcccCC
Confidence 3567777777764443 23444555542222213445677777743
No 309
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=33.00 E-value=1.3e+02 Score=23.23 Aligned_cols=61 Identities=7% Similarity=-0.010 Sum_probs=34.8
Q ss_pred CCCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCC---CCCcchHHHHHHHHHHHHHHHH
Q psy17147 3 RYRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSN---WASLEPMWNQVLFFGSLVMKMS 66 (291)
Q Consensus 3 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~---g~S~~~~~~~~~~~~~~i~~~~ 66 (291)
.+.|||+++-.+... .....-+..|++. |+.|+-+.. |. |........+++++.+.+...+
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~--G~~vi~p~~-g~la~~~~g~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKED--GVQEIEPKE-GLLACGDEGYGALADIETILETIENTL 178 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHC--CCEEECCCC-CccccCCccCCCCCCHHHHHHHHHHHh
Confidence 467899888543322 3445567778875 888887763 22 3332222234566666665544
No 310
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=32.84 E-value=2.6e+02 Score=22.42 Aligned_cols=13 Identities=23% Similarity=0.133 Sum_probs=6.0
Q ss_pred hHHHHHHHHHHHh
Q psy17147 18 KTLEKFKERIERF 30 (291)
Q Consensus 18 ~~~~~~~~~L~~~ 30 (291)
..|..+++.+.+.
T Consensus 118 ~DYe~~v~aik~~ 130 (265)
T COG4822 118 NDYEICVEAIKDQ 130 (265)
T ss_pred hhHHHHHHHHHHh
Confidence 4444444444443
No 311
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=32.23 E-value=95 Score=25.91 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=45.1
Q ss_pred EEEEcCCCCChh-HHHHHHHHHHHhCCCc-------EEEEecCCCCC-CCcchHHHHHHHHHHHHH-----HHHhcCC--
Q psy17147 7 VLVIHGILSGNK-TLEKFKERIERFHPGT-------KVVIPDNYSNW-ASLEPMWNQVLFFGSLVM-----KMSQNHP-- 70 (291)
Q Consensus 7 vvllHG~~~~~~-~~~~~~~~L~~~~~g~-------~v~~~D~~G~g-~S~~~~~~~~~~~~~~i~-----~~~~~~~-- 70 (291)
-|++.|.|...- .-+.+...+.+. |. +++.+|..|-= .+.......-..+++.-. .+.+...
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~--G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVRE--GLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHc--CCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 467778777653 333445555543 55 89999999821 111112222223332211 2233333
Q ss_pred CceEEEEeCh-HHHHHHHHHHhC
Q psy17147 71 EGIHLIGYSQ-GGLIARGILEQF 92 (291)
Q Consensus 71 ~~~~lvGhS~-GG~ia~~~a~~~ 92 (291)
++-+|+|-|- ||.+.-......
T Consensus 105 ~ptvlIG~S~~~g~ft~evv~~M 127 (279)
T cd05312 105 KPTVLIGLSGVGGAFTEEVVRAM 127 (279)
T ss_pred CCCEEEEeCCCCCCCCHHHHHHH
Confidence 6678999994 787766655543
No 312
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.87 E-value=98 Score=25.38 Aligned_cols=23 Identities=30% Similarity=0.180 Sum_probs=19.5
Q ss_pred ceEEEEeChHHHHHHHHHHhCCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
.=.++|.|.|+.++..++.....
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 44799999999999999887655
No 313
>PRK10115 protease 2; Provisional
Probab=30.58 E-value=2.7e+02 Score=26.74 Aligned_cols=66 Identities=8% Similarity=0.077 Sum_probs=39.3
Q ss_pred CCeEEEEcCCCCCh-hHH--HHHHHHHHHhCCCcEEEEe---cCCCCCCCcchHHHHHHHHHHHHHHHHhcCC
Q psy17147 4 YRPVLVIHGILSGN-KTL--EKFKERIERFHPGTKVVIP---DNYSNWASLEPMWNQVLFFGSLVMKMSQNHP 70 (291)
Q Consensus 4 ~~~vvllHG~~~~~-~~~--~~~~~~L~~~~~g~~v~~~---D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~ 70 (291)
.|+++++||....- ..| ..+...|++.....+.+.+ .--|||... +....+++.+..+..++..++
T Consensus 606 ~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~-~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 606 YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKS-GRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCc-CHHHHHHHHHHHHHHHHHHhC
Confidence 46688889999875 233 3466677665223344444 346788433 234456677777776666654
No 314
>PLN02606 palmitoyl-protein thioesterase
Probab=30.38 E-value=42 Score=28.31 Aligned_cols=66 Identities=30% Similarity=0.500 Sum_probs=47.0
Q ss_pred cceEEEecCCCCCccCcc--cccccccc---chhhhcccchhhhhcccccccccccCceeEeecCCCccccc
Q psy17147 97 VRNFISLSSPHGGQYGSN--QFGHFTED---ESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPGVDHFQW 163 (291)
Q Consensus 97 v~~li~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
++++|++..+..+...+. .|....-+ ..+.++..+..+++++.++++++..+++.+..+++ .|.++
T Consensus 210 L~~~Vlv~f~~DtvV~PkeSswFg~y~~~~~~~vipl~e~~lY~eD~iGLktLd~~Gkl~f~~v~G-~Hl~~ 280 (306)
T PLN02606 210 LHNLVLVMFQGDTVLIPRETSWFGYYPDGASTPLLSPQSTKLYTEDWIGLKTLDDAGKVKFISVPG-GHIEI 280 (306)
T ss_pred hhceEEEEeCCCceECCCccccceecCCCCCceeecchhccchhhcchhHHHHHHCCCeEEEecCC-chhee
Confidence 788999987776655432 13322222 24556677888999999999999999999999988 44433
No 315
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=29.77 E-value=1.2e+02 Score=25.12 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecC--CCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEE-EEeC
Q psy17147 3 RYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDN--YSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHL-IGYS 79 (291)
Q Consensus 3 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~--~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~l-vGhS 79 (291)
.++||+|--|++.+.+.|-..++++..+. +-+|+.+.. |++-.+.+. +++--+-.+..-+.++ |+.+ .-|+
T Consensus 151 ~~kPvLLKRg~~aTieEwL~AAEYI~s~G-N~~vILCERGIRtfe~~TRn---tLDi~aV~~~kq~THL--PVivDpSH~ 224 (286)
T COG2876 151 QNKPVLLKRGLSATIEEWLNAAEYILSHG-NGNVILCERGIRTFEKATRN---TLDISAVPILKQETHL--PVIVDPSHA 224 (286)
T ss_pred cCCCeEEecCccccHHHHHHHHHHHHhCC-CCcEEEEecccccccccccc---eechHHHHHHHhhcCC--CEEECCCCc
Confidence 47899999999999999999999998863 557777774 444443222 2222222222223333 4433 6777
Q ss_pred hHH
Q psy17147 80 QGG 82 (291)
Q Consensus 80 ~GG 82 (291)
.|=
T Consensus 225 ~Gr 227 (286)
T COG2876 225 TGR 227 (286)
T ss_pred ccc
Confidence 774
No 316
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=28.15 E-value=3.3e+02 Score=22.13 Aligned_cols=73 Identities=11% Similarity=0.032 Sum_probs=43.4
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchHHHHHHHHHHHHHHHHhcCCCceEEEEe
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWA---SLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGY 78 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~---S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 78 (291)
++++..--..+.......+..+.....+..++.+|+-+.=. +.......+..++..++.+..+++-+++++.+
T Consensus 103 ~l~i~~~~~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~sQ 178 (259)
T PF03796_consen 103 PLYIEDTPSLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIALSQ 178 (259)
T ss_dssp EEEEEESSS-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred cEEEECCCCCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEccc
Confidence 34444444445566666777776653478899999865211 22223455777788888777777655544433
No 317
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=27.81 E-value=4e+02 Score=23.03 Aligned_cols=74 Identities=5% Similarity=0.044 Sum_probs=41.4
Q ss_pred EEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHHHHH
Q psy17147 8 LVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIAR 86 (291)
Q Consensus 8 vllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ia~ 86 (291)
++++|++.+.+..+.+++.+....-..+.+-+...|...-..+....++. +..++.+.+-.+ .+..|.|.-+..
T Consensus 257 ~LI~gvNDs~eda~~La~llk~l~~~VnLiPyn~~~~~~~~~ps~e~l~~----f~~~l~~~gi~v-~iR~~~G~di~a 330 (342)
T PRK14454 257 ALVKGVNDSKEDAKELGKLLKGMLCHVNLIPVNEVKENGFKKSSKEKIKK----FKNILKKNGIET-TIRREMGSDINA 330 (342)
T ss_pred EeECCCCCCHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCCCCHHHHHH----HHHHHHHCCCcE-EEeCCCCCchhh
Confidence 49999999999999999988764212333333333322112232333333 334445555444 356788765543
No 318
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=27.28 E-value=2.9e+02 Score=21.22 Aligned_cols=64 Identities=16% Similarity=0.204 Sum_probs=38.2
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHH
Q psy17147 5 RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGG 82 (291)
Q Consensus 5 ~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG 82 (291)
..|.|+ |++...-+..++.|.+.+||.++... .|+.. + ...+++++. +++.+..+.+||-.+--
T Consensus 49 ~~vfll---G~~~~v~~~~~~~l~~~yP~l~i~g~--~g~f~---~--~~~~~i~~~----I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 49 LPIFLY---GGKPDVLQQLKVKLIKEYPKLKIVGA--FGPLE---P--EERKAALAK----IARSGAGIVFVGLGCPK 112 (177)
T ss_pred CeEEEE---CCCHHHHHHHHHHHHHHCCCCEEEEE--CCCCC---h--HHHHHHHHH----HHHcCCCEEEEEcCCcH
Confidence 355554 56667778888999999999998876 33331 1 111223333 44455567777755544
No 319
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.94 E-value=69 Score=28.57 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=23.9
Q ss_pred HHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC
Q psy17147 60 SLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 60 ~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
-.++++ .+.+ .+-+++|.|.|+.+|..++...++
T Consensus 90 GVLkaL-~E~gl~p~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 90 GVLKAL-FEANLLPRIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred HHHHHH-HHcCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 334443 3334 556799999999999999985544
No 320
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.90 E-value=3.7e+02 Score=22.33 Aligned_cols=76 Identities=9% Similarity=-0.002 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC-CceEEE-EeChHHHHHHHHHHhCCCCCc
Q psy17147 20 LEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP-EGIHLI-GYSQGGLIARGILEQFPNHNV 97 (291)
Q Consensus 20 ~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~-~~~~lv-GhS~GG~ia~~~a~~~p~~~v 97 (291)
.....+.+.+. .++.++.+|-+|...... ..++++.+ ++.... ..+++| .-++++.-+...+..+...++
T Consensus 142 l~~~l~~l~~~-~~~D~ViIDt~Gr~~~~~---~~l~el~~----~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~ 213 (270)
T PRK06731 142 MTRALTYFKEE-ARVDYILIDTAGKNYRAS---ETVEEMIE----TMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHI 213 (270)
T ss_pred HHHHHHHHHhc-CCCCEEEEECCCCCcCCH---HHHHHHHH----HHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCC
Confidence 33444445442 268999999998654322 22333333 233333 345554 456788888888888877668
Q ss_pred ceEEEe
Q psy17147 98 RNFISL 103 (291)
Q Consensus 98 ~~li~~ 103 (291)
.++|+-
T Consensus 214 ~~~I~T 219 (270)
T PRK06731 214 DGIVFT 219 (270)
T ss_pred CEEEEE
Confidence 888874
No 321
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=26.86 E-value=2.6e+02 Score=24.07 Aligned_cols=71 Identities=8% Similarity=0.069 Sum_probs=39.9
Q ss_pred CCeEEEEcCCCC-ChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeCh
Q psy17147 4 YRPVLVIHGILS-GNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQ 80 (291)
Q Consensus 4 ~~~vvllHG~~~-~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~ 80 (291)
+.+-|++|--.+ +...++.+...|....-.|.++.+.+...... +++++...+..+.+++++++.|+=.++
T Consensus 168 p~~kV~lH~~~~~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~------~l~~l~~~l~~l~~ry~K~V~V~Et~y 239 (332)
T PF07745_consen 168 PNIKVMLHLANGGDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG------TLEDLKNNLNDLASRYGKPVMVVETGY 239 (332)
T ss_dssp STSEEEEEES-TTSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST-------HHHHHHHHHHHHHHHT-EEEEEEE--
T ss_pred CCCcEEEEECCCCchHHHHHHHHHHHhcCCCcceEEEecCCCCcc------hHHHHHHHHHHHHHHhCCeeEEEeccc
Confidence 445677884444 44566667777766533566666655432221 567777777777777788887765544
No 322
>PF00148 Oxidored_nitro: Nitrogenase component 1 type Oxidoreductase; InterPro: IPR000510 Enzymes belonging to this family include cofactor-requiring nitrogenases and protochlorophyllide reductase. The key enzymatic reactions in nitrogen fixation are catalysed by the nitrogenase complex, which has two components, the iron protein (component 2), and a component (component 1) which is either a molybdenum-iron, vanadium-iron or iron-iron protein. The enzyme (1.18.6.1 from EC) forms a hexamer of two alpha, two beta and two delta chains. Protochlorophyllide reductase (1.3.1.33 from EC) is involved in the light-dependent accumulation of chlorophyll, probably at the step of reduction of protochlorophyllide to chlorophyllide.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QH1_C 1QH8_A 1H1L_C 1QGU_A 3AEK_C 3AET_C 3AER_C 3AEU_A 3AES_C 3AEQ_C ....
Probab=26.85 E-value=1.2e+02 Score=26.63 Aligned_cols=63 Identities=14% Similarity=0.157 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHhCCCcEEEEecCCCCCCCc-chHHHHHHHHHHHHHHHHhcCC-CceEEEEeC-hH
Q psy17147 18 KTLEKFKERIERFHPGTKVVIPDNYSNWASL-EPMWNQVLFFGSLVMKMSQNHP-EGIHLIGYS-QG 81 (291)
Q Consensus 18 ~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~-~~~~~~~~~~~~~i~~~~~~~~-~~~~lvGhS-~G 81 (291)
..++.+++.+++.+ |..|+.++.+|+..+. .........+.+.+..--.... ..++|+|.+ ++
T Consensus 91 dD~~~v~~~~~~~~-~~~vi~v~~~gf~~~~~~G~~~a~~~l~~~~~~~~~~~~~~~VNiiG~~~~~ 156 (398)
T PF00148_consen 91 DDIEAVARELQEEY-GIPVIPVHTPGFSGSYSQGYDAALRALAEQLVKPPEEKKPRSVNIIGGSPLG 156 (398)
T ss_dssp TTHHHHHHHHHHHH-SSEEEEEE--TTSSSHHHHHHHHHHHHHHHHTTGTTTTSSSEEEEEEESTBT
T ss_pred CCHHHHHHHhhccc-CCcEEEEECCCccCCccchHHHHHHHHHhhcccccccCCCCceEEecCcCCC
Confidence 67888888888765 6799999999994443 3333333333333311001112 789999998 55
No 323
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=26.73 E-value=1.8e+02 Score=24.06 Aligned_cols=55 Identities=9% Similarity=-0.084 Sum_probs=38.4
Q ss_pred CCChhHHHHHHHHHHHhCCCcEEE-EecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC
Q psy17147 14 LSGNKTLEKFKERIERFHPGTKVV-IPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP 70 (291)
Q Consensus 14 ~~~~~~~~~~~~~L~~~~~g~~v~-~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~ 70 (291)
.-+...+.+..+.|.+. ||+.+ -+.+-|+|....+...+.++..+.+..+.+.+|
T Consensus 55 TKnp~P~l~~L~~l~~~--gy~~yfq~Tit~Y~~~lEp~vP~~~~~i~~f~~Ls~~iG 110 (266)
T PF08902_consen 55 TKNPAPFLPYLDELDER--GYPYYFQFTITGYGKDLEPNVPPKDERIETFRELSERIG 110 (266)
T ss_pred cCCcHHHHhhHHHHHhC--CCceEEEEEeCCCCccccCCCCCHHHHHHHHHHHHHHHC
Confidence 33445555666666665 66655 567788888877766667778888888888887
No 324
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=26.56 E-value=55 Score=18.31 Aligned_cols=9 Identities=44% Similarity=0.914 Sum_probs=7.5
Q ss_pred CCeEEEEcC
Q psy17147 4 YRPVLVIHG 12 (291)
Q Consensus 4 ~~~vvllHG 12 (291)
+..|+++||
T Consensus 32 p~~vilVHG 40 (43)
T PF07521_consen 32 PRKVILVHG 40 (43)
T ss_dssp SSEEEEESS
T ss_pred CCEEEEecC
Confidence 467999998
No 325
>PRK08506 replicative DNA helicase; Provisional
Probab=26.51 E-value=4.9e+02 Score=23.65 Aligned_cols=62 Identities=8% Similarity=0.052 Sum_probs=35.1
Q ss_pred ChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cchHHHHHHHHHHHHHHHHhcCCCceEEEE
Q psy17147 16 GNKTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEPMWNQVLFFGSLVMKMSQNHPEGIHLIG 77 (291)
Q Consensus 16 ~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 77 (291)
+.......+..+...+++..++.+|+.+--.+ .......+.++...++.+.++++-+++++.
T Consensus 285 ti~~I~~~~r~l~~~~~~~~lvvIDyLql~~~~~~~~~r~~ev~~isr~LK~lAkel~ipVi~ls 349 (472)
T PRK08506 285 NIHQVRAQLRKLKSQHPEIGLAVIDYLQLMSGSGNFKDRHLQISEISRGLKLLARELDIPIIALS 349 (472)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEcChhhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 44555555566655444677888887652221 122234456667777776666665555544
No 326
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=26.10 E-value=4e+02 Score=23.79 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc--CC-CceEEEE
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN--HP-EGIHLIG 77 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~--~~-~~~~lvG 77 (291)
.|.+|++.+...+. .....+++.+.++.+|..|+.+.-+|+..+... ..+.....+...+.. .. .+++++|
T Consensus 97 ~P~~I~V~tTC~~e~IGDDi~~v~~e~~~~~~~~pvv~v~t~Gf~g~~~~---G~~~~~~alv~~~~~~~~~~~~VniiG 173 (427)
T PRK02842 97 NISVLFLVGSCPSEVIKLDLEGLAERLSTEFAGVPVLNYSGSGLETTFTQ---GEDAVLAALVPFCPEAPADHPSLVLVG 173 (427)
T ss_pred CCCEEEEECCChHHhhcCCHHHHHHHhhcccCCCeEEEeeCCCccccHHH---HHHHHHHHHhhhcccccCCCCcEEEEE
Confidence 46688887766664 677888888887766889999999988554221 122222223222221 12 6789999
Q ss_pred eChHH
Q psy17147 78 YSQGG 82 (291)
Q Consensus 78 hS~GG 82 (291)
.-..+
T Consensus 174 ~~~~~ 178 (427)
T PRK02842 174 SLADV 178 (427)
T ss_pred eCCcc
Confidence 76554
No 327
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=26.02 E-value=1.7e+02 Score=23.61 Aligned_cols=68 Identities=22% Similarity=0.173 Sum_probs=45.7
Q ss_pred CCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC--CceEEEEeC
Q psy17147 4 YRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP--EGIHLIGYS 79 (291)
Q Consensus 4 ~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS 79 (291)
.|.||++.|+.++. ..-..+...|.-+ |++|.++.-|.. -+.--..+-.+..+++ +.+.|+=-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPR--g~~v~~~~~pt~----------eE~~~p~lwRfw~~lP~~G~i~IF~rS 97 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPR--GARVVALPKPSD----------RERTQWYFQRYVQHLPAAGEIVLFDRS 97 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCC--eeEEEeCCCCCH----------HHHcChHHHHHHHhCCCCCeEEEEeCc
Confidence 46678999999986 5777787878765 889988876621 1112233556667777 677777666
Q ss_pred hHHH
Q psy17147 80 QGGL 83 (291)
Q Consensus 80 ~GG~ 83 (291)
+=+-
T Consensus 98 wY~~ 101 (230)
T TIGR03707 98 WYNR 101 (230)
T ss_pred hhhh
Confidence 6444
No 328
>PRK04148 hypothetical protein; Provisional
Probab=25.96 E-value=1.3e+02 Score=22.03 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHh
Q psy17147 56 LFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~ 91 (291)
+++++.+........ .++..||-..|..+|..++..
T Consensus 2 ~~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 2 DTIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred hHHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHC
Confidence 345555544333333 679999999888888888754
No 329
>KOG2963|consensus
Probab=25.94 E-value=1.1e+02 Score=26.29 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=21.5
Q ss_pred CCeEEEEcCCCCChhHHHH-HHHHHHHhCCCcE
Q psy17147 4 YRPVLVIHGILSGNKTLEK-FKERIERFHPGTK 35 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~-~~~~L~~~~~g~~ 35 (291)
.||+|++.||+.+...-.. +...|+..||-++
T Consensus 134 ~pPLlVmNgFg~~~~~HlkL~~t~FQNmFPsIn 166 (405)
T KOG2963|consen 134 SPPLLVLNGFGTSGRKHLKLMTTMFQNMFPSIN 166 (405)
T ss_pred CCCEEEEccCCCCcchhHHHHHHHHHHcCCCcC
Confidence 5789999999999743333 3445666565443
No 330
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=25.78 E-value=3.5e+02 Score=22.54 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=34.7
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVM 63 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~ 63 (291)
..|++++||-......... ...+.+..++.+++.+.-.||...... .++.+.+.+.
T Consensus 248 ~~P~lii~g~~D~~~p~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~i~~~~~ 303 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQS-AWALHKAFPEAELKVTNNAGHSAFDPN---NLAALVHALE 303 (306)
T ss_pred CCCeEEEecCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCCCCChH---HHHHHHHHHH
Confidence 3589999999887554443 444555556778888776777764322 3344444443
No 331
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=25.71 E-value=2.2e+02 Score=24.29 Aligned_cols=11 Identities=27% Similarity=0.356 Sum_probs=4.7
Q ss_pred hHHHHHHHHHH
Q psy17147 18 KTLEKFKERIE 28 (291)
Q Consensus 18 ~~~~~~~~~L~ 28 (291)
..|..+++.+.
T Consensus 60 ~~w~~la~~i~ 70 (323)
T smart00870 60 ADWLKLAKRIN 70 (323)
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 332
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=25.58 E-value=1.3e+02 Score=22.56 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhcCC-CceEEEEeChH
Q psy17147 57 FFGSLVMKMSQNHP-EGIHLIGYSQG 81 (291)
Q Consensus 57 ~~~~~i~~~~~~~~-~~~~lvGhS~G 81 (291)
++++.+..+...-. +-+++||-|.|
T Consensus 84 ~fA~~l~~~~~~g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 84 EFAKKLERWMNQGKSDIVFIIGGADG 109 (155)
T ss_dssp HHHHHHHHHHHTTS-EEEEEE-BTTB
T ss_pred HHHHHHHHHHhcCCceEEEEEecCCC
Confidence 44444444333322 23344555554
No 333
>COG0400 Predicted esterase [General function prediction only]
Probab=25.51 E-value=3.4e+02 Score=21.48 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCC-CCCC
Q psy17147 3 RYRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNY-SNWA 46 (291)
Q Consensus 3 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~-G~g~ 46 (291)
..+||+++||-.... ..-..+.+.|... |++|-.-+.. ||.-
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~--g~~v~~~~~~~GH~i 190 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTAS--GADVEVRWHEGGHEI 190 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHc--CCCEEEEEecCCCcC
Confidence 478999999988863 4556778888886 8888888876 3443
No 334
>KOG1252|consensus
Probab=25.41 E-value=3.7e+02 Score=23.27 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
+++=+|+||.|.. .+-..+-++|.+..++..|+..|.
T Consensus 211 g~vDi~V~gaGTG-GTitgvGRylke~~~~~kVv~vdp 247 (362)
T KOG1252|consen 211 GKVDIFVAGAGTG-GTITGVGRYLKEQNPNIKVVGVDP 247 (362)
T ss_pred CCCCEEEeccCCC-ceeechhHHHHHhCCCCEEEEeCC
Confidence 4445788876654 334455667777777889999886
No 335
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=25.38 E-value=2.7e+02 Score=21.35 Aligned_cols=61 Identities=13% Similarity=0.029 Sum_probs=34.4
Q ss_pred CcEEEEecCC-CCCCCcchH-------HHHHHHHHHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCCC
Q psy17147 33 GTKVVIPDNY-SNWASLEPM-------WNQVLFFGSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPNH 95 (291)
Q Consensus 33 g~~v~~~D~~-G~g~S~~~~-------~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~~ 95 (291)
|.+++.+..+ +......+. ...-+..++.+.++.++ + .+=+|+|||-.|- ++.+-.-.|+.
T Consensus 20 GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~-Gf~PDvI~~H~GWGe-~Lflkdv~P~a 89 (171)
T PF12000_consen 20 GVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQ-GFVPDVIIAHPGWGE-TLFLKDVFPDA 89 (171)
T ss_pred CcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHc-CCCCCEEEEcCCcch-hhhHHHhCCCC
Confidence 8888888873 322222221 11124455566664444 7 7778899986664 23344457763
No 336
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.03 E-value=68 Score=27.70 Aligned_cols=18 Identities=33% Similarity=0.311 Sum_probs=15.8
Q ss_pred EEEEeChHHHHHHHHHHh
Q psy17147 74 HLIGYSQGGLIARGILEQ 91 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~ 91 (291)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 579999999999999863
No 337
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=25.01 E-value=50 Score=29.92 Aligned_cols=51 Identities=20% Similarity=0.290 Sum_probs=33.4
Q ss_pred cceEEEeeCCCceeccCccCcccccCCCceEEecccccccccccchhhhhhh----cC-CEEEEeeCCCCcceeec
Q psy17147 207 HRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDK----QG-KLVLISVPGVDHFQWHN 277 (291)
Q Consensus 207 p~lv~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~-~~~~~~~~~~gH~~~~e 277 (291)
-++|+++|..|..++|..+. ..|.. .. +.+.. .. -.|+..+||.+|+.--.
T Consensus 354 GKLI~~HG~aD~~I~p~~ti--~YY~~----------------V~--~~~g~~~~~v~dF~RlF~vPGm~HC~gG~ 409 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTI--DYYER----------------VV--ARMGGALADVDDFYRLFMVPGMGHCGGGP 409 (474)
T ss_pred CeEEEEecCCCCccCCCcHH--HHHHH----------------HH--HhcccccccccceeEEEecCCCcccCCCC
Confidence 35679999999999998875 22211 00 22211 12 56899999999997544
No 338
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=24.97 E-value=91 Score=25.79 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=43.3
Q ss_pred CCeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC--CceEEEEeC
Q psy17147 4 YRPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP--EGIHLIGYS 79 (291)
Q Consensus 4 ~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS 79 (291)
.+.||++.|+.++. ..-..+.+.|.-+ |++|.++.-|.. -+.....+-.+..+++ +.+.|+=-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPR--g~~V~s~~~Pt~----------eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQ--GCQVTSFKAPSA----------EELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCC--eeEEEeCCCCCH----------HHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 46789999999986 6777888888766 899998866511 1112233455566666 566666555
Q ss_pred hH
Q psy17147 80 QG 81 (291)
Q Consensus 80 ~G 81 (291)
+=
T Consensus 123 WY 124 (264)
T TIGR03709 123 HY 124 (264)
T ss_pred cc
Confidence 43
No 339
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=24.90 E-value=3e+02 Score=20.66 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=25.6
Q ss_pred CeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 5 RPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 5 ~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
+.||++=|+.++. ..=..+.+.|.+. |+.++.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~--g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFAR--GIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHT--TS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHc--CCcEEEecC
Confidence 4689999999996 3444666777776 899999985
No 340
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=24.74 E-value=58 Score=27.98 Aligned_cols=18 Identities=22% Similarity=0.006 Sum_probs=14.9
Q ss_pred eEEEEeChHHHHHHHHHH
Q psy17147 73 IHLIGYSQGGLIARGILE 90 (291)
Q Consensus 73 ~~lvGhS~GG~ia~~~a~ 90 (291)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 357999999998888774
No 341
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.71 E-value=1.2e+02 Score=24.42 Aligned_cols=22 Identities=27% Similarity=0.235 Sum_probs=18.7
Q ss_pred ceEEEEeChHHHHHHHHHHhCC
Q psy17147 72 GIHLIGYSQGGLIARGILEQFP 93 (291)
Q Consensus 72 ~~~lvGhS~GG~ia~~~a~~~p 93 (291)
.-.++|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4479999999999999998654
No 342
>PRK05595 replicative DNA helicase; Provisional
Probab=24.62 E-value=4.9e+02 Score=23.38 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=36.4
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cchHHHHHHHHHHHHHHHHhcCCCceEEE
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEPMWNQVLFFGSLVMKMSQNHPEGIHLI 76 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 76 (291)
+.+-...+.+.......+..+...+ |..++.+|+.+.=.+ .......+..+.+.++.+..+++-+++++
T Consensus 286 l~i~d~~~~t~~~i~~~~r~~~~~~-~~~~vvIDylql~~~~~~~~~r~~~v~~is~~LK~lAke~~i~vi~l 357 (444)
T PRK05595 286 IFIDDTAGVSVMEMRSKCRRLKIEH-GIDMILIDYLQLMSGGKGSESRQQEVSEISRSIKALAKEMECPVIAL 357 (444)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhc-CCCEEEEeHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 4333333344455555555565443 778888887552111 11223345666677777666665445443
No 343
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=24.34 E-value=1.6e+02 Score=20.50 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHhcCC-C-ceEEEEeChHH
Q psy17147 51 MWNQVLFFGSLVMKMSQNHP-E-GIHLIGYSQGG 82 (291)
Q Consensus 51 ~~~~~~~~~~~i~~~~~~~~-~-~~~lvGhS~GG 82 (291)
....++.++..+..++++.+ . .-.|+||....
T Consensus 84 ~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 84 TAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 46677888888888888888 4 68899998754
No 344
>PHA02114 hypothetical protein
Probab=24.10 E-value=1.1e+02 Score=20.80 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=24.9
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEec
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPD 40 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D 40 (291)
+||+=-.+.++...|-.++..|.+. ||+|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~--g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEA--GFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhc--Cceeeehh
Confidence 4566566777778888888888885 88888743
No 345
>PRK05636 replicative DNA helicase; Provisional
Probab=23.99 E-value=5.7e+02 Score=23.53 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=34.4
Q ss_pred ChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC---cchHHHHHHHHHHHHHHHHhcCCCceEEEE
Q psy17147 16 GNKTLEKFKERIERFHPGTKVVIPDNYSNWAS---LEPMWNQVLFFGSLVMKMSQNHPEGIHLIG 77 (291)
Q Consensus 16 ~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S---~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 77 (291)
+....+..+..+...+ |..++.+|+.+-=.+ .......+..+.+.++.+.++++-+++++.
T Consensus 359 ti~~I~~~~r~~~~~~-~~~lvvIDYLql~~~~~~~~~r~~ei~~isr~LK~lAkel~ipVi~ls 422 (505)
T PRK05636 359 TMMEIRSKARRLKQKH-DLKLIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDVPLIAIS 422 (505)
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEcchHhcCCCCCCCcHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 3444555556665543 778888887552211 122233566677777777777765555444
No 346
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=23.88 E-value=74 Score=23.93 Aligned_cols=22 Identities=23% Similarity=0.089 Sum_probs=17.1
Q ss_pred CceEEEEeChHHHHHHHHHHhC
Q psy17147 71 EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
..-.+.|-|.||.+|..++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 4457899999999998887763
No 347
>PRK03204 haloalkane dehalogenase; Provisional
Probab=23.72 E-value=2.5e+02 Score=23.12 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCc
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASL 48 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~ 48 (291)
..|+++++|-...........+.+.+..++.++..++--||.-..
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~ 271 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQE 271 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccc
Confidence 578999999777543333445556666667788888888887654
No 348
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.62 E-value=1.1e+02 Score=25.83 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=24.7
Q ss_pred HHHHHHHHhcC----C-CceEEEEeC--hHHHHHHHHHHh
Q psy17147 59 GSLVMKMSQNH----P-EGIHLIGYS--QGGLIARGILEQ 91 (291)
Q Consensus 59 ~~~i~~~~~~~----~-~~~~lvGhS--~GG~ia~~~a~~ 91 (291)
+..+.++++++ . +.+.++|-| ||-.++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 44555556654 2 889999997 999999998764
No 349
>PF13728 TraF: F plasmid transfer operon protein
Probab=23.53 E-value=2.2e+02 Score=22.65 Aligned_cols=40 Identities=5% Similarity=-0.122 Sum_probs=30.5
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC
Q psy17147 7 VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS 47 (291)
Q Consensus 7 vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S 47 (291)
++|.-|-..-.....+++..|++.+ |+.|+.++.-|.+..
T Consensus 125 ~~F~~~~C~~C~~~~pil~~~~~~y-g~~v~~vs~DG~~~~ 164 (215)
T PF13728_consen 125 FFFYRSDCPYCQQQAPILQQFADKY-GFSVIPVSLDGRPIP 164 (215)
T ss_pred EEEEcCCCchhHHHHHHHHHHHHHh-CCEEEEEecCCCCCc
Confidence 3445565555678888888998887 999999988887765
No 350
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=23.48 E-value=3.8e+02 Score=22.47 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=35.7
Q ss_pred CCeEEEEcC--CCCCh--------------hHHHHHHHHHHHhCCCcE--EEEecC-CCCCCCcchHHHHHHHHHHHHHH
Q psy17147 4 YRPVLVIHG--ILSGN--------------KTLEKFKERIERFHPGTK--VVIPDN-YSNWASLEPMWNQVLFFGSLVMK 64 (291)
Q Consensus 4 ~~~vvllHG--~~~~~--------------~~~~~~~~~L~~~~~g~~--v~~~D~-~G~g~S~~~~~~~~~~~~~~i~~ 64 (291)
+.++|++|- .+.+. ..+...++.+.+. |+. =+.+|. .|+|++.... -++...+..
T Consensus 133 ~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~--GI~~~~IilDPGiGF~k~~~~n----~~ll~~l~~ 206 (282)
T PRK11613 133 GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAA--GIAKEKLLLDPGFGFGKNLSHN----YQLLARLAE 206 (282)
T ss_pred CCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHc--CCChhhEEEeCCCCcCCCHHHH----HHHHHHHHH
Confidence 567888884 32221 1223334444443 664 566776 3444443221 122333333
Q ss_pred HHhcCCCceEEEEeChHHHHH
Q psy17147 65 MSQNHPEGIHLIGYSQGGLIA 85 (291)
Q Consensus 65 ~~~~~~~~~~lvGhS~GG~ia 85 (291)
+ ..++- ..++|+|-=+.+.
T Consensus 207 l-~~lg~-Pilvg~SRKsfig 225 (282)
T PRK11613 207 F-HHFNL-PLLVGMSRKSMIG 225 (282)
T ss_pred H-HhCCC-CEEEEecccHHHH
Confidence 2 23433 4589999544443
No 351
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=23.47 E-value=83 Score=25.37 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=37.9
Q ss_pred CeEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHH-HHHHHHHhcCC--CceEEEEeC
Q psy17147 5 RPVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFG-SLVMKMSQNHP--EGIHLIGYS 79 (291)
Q Consensus 5 ~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~-~~i~~~~~~~~--~~~~lvGhS 79 (291)
|.||++.|+.++. ..-..+...|.-+ |++|.++.-| +-++.. ..+..+..+++ +.+.|+=-|
T Consensus 31 ~vlIl~eG~d~sGKg~~I~~l~~~lDPR--~~~v~~~~~p-----------t~eE~~~p~lwRfw~~lP~~G~I~if~rS 97 (228)
T PF03976_consen 31 PVLILFEGWDASGKGGTINRLIEWLDPR--GFRVHAFGKP-----------TDEELRRPFLWRFWRALPARGQIGIFDRS 97 (228)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHCCS-GG--GEEEEE-SS-------------HHHHTS-TTHHHHTTS--TT-EEEEES-
T ss_pred cEEEEEeccccCCchHHHHHHHHhCCCC--eeEEEeCCCC-----------ChhHcCCCcHHHHHHhCCCCCEEEEEecc
Confidence 4678899999986 5666777777666 8899988876 222221 23455566666 566666655
Q ss_pred hHH
Q psy17147 80 QGG 82 (291)
Q Consensus 80 ~GG 82 (291)
+=+
T Consensus 98 WY~ 100 (228)
T PF03976_consen 98 WYE 100 (228)
T ss_dssp GGG
T ss_pred hhh
Confidence 544
No 352
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=23.40 E-value=1.7e+02 Score=22.00 Aligned_cols=58 Identities=9% Similarity=-0.030 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcC---CCceEEEEeChHHHHHHHHHHhCCCCCcceEEEecCCCCCc
Q psy17147 52 WNQVLFFGSLVMKMSQNH---PEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQ 110 (291)
Q Consensus 52 ~~~~~~~~~~i~~~~~~~---~~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~~~~~~~~ 110 (291)
...++...+.+.++++++ ++++.+.|-|..|..-+.++...++. +..++=.++--.|.
T Consensus 47 ~~~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~-I~~vvD~np~K~G~ 107 (160)
T PF08484_consen 47 AKRVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDL-IDYVVDDNPLKQGK 107 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTT-S--EEES-GGGTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcce-eEEEEeCChhhcCc
Confidence 444555566666655444 37899999999999999988776664 65555444433443
No 353
>cd01972 Nitrogenase_VnfE_like Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=23.36 E-value=2.6e+02 Score=24.96 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCC-Cc-chHHHHHHHHHHHHHHHHhc----CC-Cce
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWA-SL-EPMWNQVLFFGSLVMKMSQN----HP-EGI 73 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~-S~-~~~~~~~~~~~~~i~~~~~~----~~-~~~ 73 (291)
.|.+|++.....+. ...+.+++.++++. |..|+.++-+|+.. +. .......+.+.+. +... .. ..+
T Consensus 89 ~P~~I~V~ttC~~~iIGdDi~~v~~~~~~~~-~~pvi~v~t~gf~g~~~~~G~~~a~~al~~~---~~~~~~~~~~~~~V 164 (426)
T cd01972 89 KPKAIFVATSCATGIIGDDVESVVEELEDEI-GIPVVALHCEGFKGKHWRSGFDAAFHGILRH---LVPPQDPTKQEDSV 164 (426)
T ss_pred CCCEEEEECCChHHHhccCHHHHHHHHHHhh-CCCEEEEeCCccCCccHhHHHHHHHHHHHHH---hcCCCCCCCCCCCE
Confidence 46677777766654 67788888888765 88999999999765 53 2222223333322 2221 12 579
Q ss_pred EEEEeChH
Q psy17147 74 HLIGYSQG 81 (291)
Q Consensus 74 ~lvGhS~G 81 (291)
+|+|....
T Consensus 165 NliG~~~~ 172 (426)
T cd01972 165 NIIGLWGG 172 (426)
T ss_pred EEEccCCC
Confidence 99998765
No 354
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=23.19 E-value=2.3e+02 Score=25.75 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=25.9
Q ss_pred CCCeEEEEcCCCCC---hhHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 3 RYRPVLVIHGILSG---NKTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 3 ~~~~vvllHG~~~~---~~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
.+.||++++-.+.. ......-+..|.+. |+.|+-++.
T Consensus 179 ~~~PvliaPaMN~~M~~npat~~Nl~~L~~~--G~~vi~P~~ 218 (475)
T PRK13982 179 ANRPILLAPAMNPLMWNNPATRRNVAQLKRD--GVHMIGPNA 218 (475)
T ss_pred cCCCEEEEEcCCHHHhcCHHHHHHHHHHHHC--CCEEECCCC
Confidence 46789998866654 23444667778776 999987765
No 355
>PHA02857 monoglyceride lipase; Provisional
Probab=23.11 E-value=4.1e+02 Score=21.48 Aligned_cols=64 Identities=9% Similarity=-0.010 Sum_probs=34.9
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN 68 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~ 68 (291)
..|++++||-...........+......+...+..++--||.-.... ....+++.+++.++++.
T Consensus 209 ~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~-~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 209 KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKET-DEVKKSVMKEIETWIFN 272 (276)
T ss_pred CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCc-hhHHHHHHHHHHHHHHH
Confidence 46899999988876555544333332211346666666666554322 12244555555555543
No 356
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=22.68 E-value=2.1e+02 Score=18.12 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=16.7
Q ss_pred CcEEEEecCCCC---CCCcchHHHHHHHH
Q psy17147 33 GTKVVIPDNYSN---WASLEPMWNQVLFF 58 (291)
Q Consensus 33 g~~v~~~D~~G~---g~S~~~~~~~~~~~ 58 (291)
+|-+..+|++|+ |.|.......+++.
T Consensus 15 ~y~~~~Pdlpgc~s~G~T~eea~~n~~ea 43 (73)
T COG1598 15 GYVASVPDLPGCHSQGETLEEALQNAKEA 43 (73)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHH
Confidence 788999999994 55544443334333
No 357
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=22.67 E-value=4.1e+02 Score=22.55 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=47.4
Q ss_pred EEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCC---------------CCCCcchH---HH--------HHHHHHHH
Q psy17147 8 LVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYS---------------NWASLEPM---WN--------QVLFFGSL 61 (291)
Q Consensus 8 vllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G---------------~g~S~~~~---~~--------~~~~~~~~ 61 (291)
.|+-|.+. .-+...+.++|.+++|+.+++++|..| -|.+.-+. .. +-++....
T Consensus 172 ~fVagvGT-GGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~~~ 250 (300)
T COG0031 172 AFVAGVGT-GGTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAIAT 250 (300)
T ss_pred EEEEeCCc-chhHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHHHH
Confidence 34444333 345567788899988899999999764 12221111 00 01222333
Q ss_pred HHHHHhcCCCceEEEEeChHHHH--HHHHHHhCCC
Q psy17147 62 VMKMSQNHPEGIHLIGYSQGGLI--ARGILEQFPN 94 (291)
Q Consensus 62 i~~~~~~~~~~~~lvGhS~GG~i--a~~~a~~~p~ 94 (291)
...+.+ +.=.++|-|-|+.+ |++++.+.+.
T Consensus 251 ~r~La~---~eGilvG~SsGA~~~aa~~~a~~~~~ 282 (300)
T COG0031 251 ARRLAR---EEGLLVGISSGAALAAALKLAKELPA 282 (300)
T ss_pred HHHHHH---HhCeeecccHHHHHHHHHHHHHhcCC
Confidence 333222 33468999999866 5667777664
No 358
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=22.62 E-value=1.8e+02 Score=23.25 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=23.6
Q ss_pred CCeEEEEcCCCCChh---HHHHHHHHHHHhCCCcEEEEecC
Q psy17147 4 YRPVLVIHGILSGNK---TLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 4 ~~~vvllHG~~~~~~---~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
++.|.|++-.+.+.+ +-+...+.|++. |+.+.-+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~l--g~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKL--GLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHc--CCeeeeeec
Confidence 457888887666653 344566677776 777766665
No 359
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B.
Probab=22.58 E-value=68 Score=23.93 Aligned_cols=65 Identities=12% Similarity=0.037 Sum_probs=31.4
Q ss_pred CChhHHHHHHHHHHHhCCCcEEEEecC--CCCCCCcchHHHH-HHHHHHHHHHHHhcCCCceEEEEeChHHHH
Q psy17147 15 SGNKTLEKFKERIERFHPGTKVVIPDN--YSNWASLEPMWNQ-VLFFGSLVMKMSQNHPEGIHLIGYSQGGLI 84 (291)
Q Consensus 15 ~~~~~~~~~~~~L~~~~~g~~v~~~D~--~G~g~S~~~~~~~-~~~~~~~i~~~~~~~~~~~~lvGhS~GG~i 84 (291)
|+.++|..+.+.+.++ +++++|. ..|..|.++.... +-++.+.+.+ +...+.++.++=..+|+..
T Consensus 38 GNGRTydHLRe~~p~R----~I~vfDR~l~~hp~~~P~~~~~ilGdi~~tl~~-~~~~g~~a~laHaD~G~g~ 105 (160)
T PF12692_consen 38 GNGRTYDHLREIFPDR----RIYVFDRALACHPSSTPPEEDLILGDIRETLPA-LARFGAGAALAHADIGTGD 105 (160)
T ss_dssp TTSHHHHHHHHH--SS-----EEEEESS--S-GGG---GGGEEES-HHHHHHH-HHHH-S-EEEEEE----S-
T ss_pred CCCccHHHHHHhCCCC----eEEEEeeecccCCCCCCchHheeeccHHHHhHH-HHhcCCceEEEEeecCCCC
Confidence 4568999888888765 9999997 3355554333111 1233333444 5556778889989999754
No 360
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=22.46 E-value=97 Score=27.29 Aligned_cols=34 Identities=18% Similarity=0.027 Sum_probs=24.5
Q ss_pred HHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhCCC
Q psy17147 60 SLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 60 ~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
-.+++ +.+.+ .+-++.|.|.|+.+|..+|..-++
T Consensus 100 Gv~ka-L~e~gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 100 GVVKA-LWLRGLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHH-HHHcCCCCceEEEecHHHHHHHHHHcCCHH
Confidence 34444 44455 666799999999999999985433
No 361
>PTZ00062 glutaredoxin; Provisional
Probab=22.35 E-value=2.6e+02 Score=22.13 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=33.0
Q ss_pred CCeEEEEc-CCCCChhHHHHHHHHHHHhCCCcEEEEecCC
Q psy17147 4 YRPVLVIH-GILSGNKTLEKFKERIERFHPGTKVVIPDNY 42 (291)
Q Consensus 4 ~~~vvllH-G~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~ 42 (291)
+..|+++| .|......+.++.+.|++.++.+.++.+|.-
T Consensus 18 g~~vl~f~a~w~~~C~~m~~vl~~l~~~~~~~~F~~V~~d 57 (204)
T PTZ00062 18 GKLVLYVKSSKEPEYEQLMDVCNALVEDFPSLEFYVVNLA 57 (204)
T ss_pred CcEEEEEeCCCCcchHHHHHHHHHHHHHCCCcEEEEEccc
Confidence 66778886 6677778999999999999999999999865
No 362
>PRK02399 hypothetical protein; Provisional
Probab=22.17 E-value=5.6e+02 Score=22.79 Aligned_cols=93 Identities=20% Similarity=0.209 Sum_probs=60.0
Q ss_pred EEEcCCCCCh-hHHHHHHHHHHHhCCCcEEEEecCCCCC------------------CCcc------hHHHHHHHHHHHH
Q psy17147 8 LVIHGILSGN-KTLEKFKERIERFHPGTKVVIPDNYSNW------------------ASLE------PMWNQVLFFGSLV 62 (291)
Q Consensus 8 vllHG~~~~~-~~~~~~~~~L~~~~~g~~v~~~D~~G~g------------------~S~~------~~~~~~~~~~~~i 62 (291)
|++=|...+. .....+.+.+.+. |..|+.+|.-..| .+.. +....++.+.+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~--g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAA--GLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHC--CCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4445555554 6777777778775 8999999983332 1100 1123345556655
Q ss_pred HHHHhc----CC-CceEEEEeChHHHHHHHHHHhCCCCCcceEEEe
Q psy17147 63 MKMSQN----HP-EGIHLIGYSQGGLIARGILEQFPNHNVRNFISL 103 (291)
Q Consensus 63 ~~~~~~----~~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~li~~ 103 (291)
..++.+ -. .-++-+|-|+|..++...+...|-- +=++++-
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG-~PKlmVS 128 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIG-VPKLMVS 128 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCC-CCeEEEE
Confidence 555543 23 6678899999999999999998863 5566554
No 363
>KOG1465|consensus
Probab=22.05 E-value=2.7e+02 Score=23.63 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=21.1
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 6 PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 6 ~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
-|||.|| ++.+...+...-.++...|+|++.+-
T Consensus 164 EviLT~g---~SrTV~~FL~~A~kk~Rkf~viVaE~ 196 (353)
T KOG1465|consen 164 EVILTLG---SSRTVENFLKHAAKKGRKFRVIVAEG 196 (353)
T ss_pred ceEEecC---ccHHHHHHHHHHHhccCceEEEEeec
Confidence 3889999 55666655554444323678887764
No 364
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=21.95 E-value=1.7e+02 Score=20.52 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=24.8
Q ss_pred ceEEEE-eChHHHHHHHHHHhCCCCCcceEEEecCC
Q psy17147 72 GIHLIG-YSQGGLIARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 72 ~~~lvG-hS~GG~ia~~~a~~~p~~~v~~li~~~~~ 106 (291)
++.|+| ..+.|...+.++.++|+ ++-+.+++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~--~e~~~~~~~~ 34 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD--FELVALVSSS 34 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST--EEEEEEEEST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC--ccEEEeeeec
Confidence 577899 89999999999999886 5545545443
No 365
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=21.86 E-value=3.5e+02 Score=24.07 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCCh---hHHHHHHHHHHHhCCCcEEEEecCCCCCCC
Q psy17147 4 YRPVLVIHGILSGN---KTLEKFKERIERFHPGTKVVIPDNYSNWAS 47 (291)
Q Consensus 4 ~~~vvllHG~~~~~---~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S 47 (291)
.|.+|++.+...+. ...+.+++.+.++. +..|+.++-+|+..+
T Consensus 85 ~p~~I~v~~tC~~~iIGdDi~~v~~~~~~~~-~~~vi~v~t~gf~g~ 130 (430)
T cd01981 85 KPDLIVLTPTCTSSILQEDLQNFVRAAGLSS-KSPVLPLDVNHYRVN 130 (430)
T ss_pred CCCEEEEeCCccHHHHhhCHHHHHHHhhhcc-CCCeEEecCCCccch
Confidence 35577777765553 57777777777653 889999999998766
No 366
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=21.86 E-value=1.8e+02 Score=21.24 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=27.2
Q ss_pred eEEEEcCCCCCh--hHHHHHHHHHHHhCCCcEEEEecCCCCCCC
Q psy17147 6 PVLVIHGILSGN--KTLEKFKERIERFHPGTKVVIPDNYSNWAS 47 (291)
Q Consensus 6 ~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S 47 (291)
|+|.+-|..++. ..-+.+++.|.++ ||+|.++=.-+||..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~--g~~v~~ik~~~~g~~ 42 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRR--GYRVAVIKHTDHGQF 42 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHT--T--EEEEEE-STTST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHc--CCceEEEEEccCCCc
Confidence 578888888775 5667888999887 999986666566555
No 367
>KOG1200|consensus
Probab=21.80 E-value=3.7e+02 Score=21.38 Aligned_cols=27 Identities=11% Similarity=0.116 Sum_probs=20.5
Q ss_pred CCChhHHHHHHHHHHHhCCCcEEEEecCC
Q psy17147 14 LSGNKTLEKFKERIERFHPGTKVVIPDNY 42 (291)
Q Consensus 14 ~~~~~~~~~~~~~L~~~~~g~~v~~~D~~ 42 (291)
++++..=+.+...|..+ |++|.+.|+.
T Consensus 21 Gg~sGIGrAia~~la~~--Garv~v~dl~ 47 (256)
T KOG1200|consen 21 GGSSGIGRAIAQLLAKK--GARVAVADLD 47 (256)
T ss_pred cCCchHHHHHHHHHHhc--CcEEEEeecc
Confidence 34445566788889887 9999999874
No 368
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.73 E-value=83 Score=26.28 Aligned_cols=19 Identities=37% Similarity=0.539 Sum_probs=16.6
Q ss_pred EEEEeChHHHHHHHHHHhC
Q psy17147 74 HLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 74 ~lvGhS~GG~ia~~~a~~~ 92 (291)
.++|.|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999999998654
No 369
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=21.63 E-value=5.2e+02 Score=22.69 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=25.2
Q ss_pred CCCeEEEEcCCCCCh----hHHHHHHHHHHHhCCCcEEEEecCC
Q psy17147 3 RYRPVLVIHGILSGN----KTLEKFKERIERFHPGTKVVIPDNY 42 (291)
Q Consensus 3 ~~~~vvllHG~~~~~----~~~~~~~~~L~~~~~g~~v~~~D~~ 42 (291)
....||+++|++..- +.-+++.+.|+++ |.+|-.-=+|
T Consensus 307 nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~--Gv~VrfaIHP 348 (463)
T COG1282 307 NASSVIIVPGYGMAVAQAQHPVAEITEKLRAR--GVNVRFAIHP 348 (463)
T ss_pred CCCeEEEecCchHHHHhhhhHHHHHHHHHHhc--CCeeeEeecc
Confidence 345688889888864 4555677778776 7776544443
No 370
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.39 E-value=1.3e+02 Score=26.64 Aligned_cols=36 Identities=17% Similarity=0.075 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCceEEEEeChHHHHHHHHHHhCCC
Q psy17147 59 GSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQFPN 94 (291)
Q Consensus 59 ~~~i~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~ 94 (291)
+-.++++.++--.+-+++|.|.|+.+|..++...++
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 344455444322566799999999999999985544
No 371
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=21.37 E-value=2.4e+02 Score=21.25 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=33.6
Q ss_pred cEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCC--CceEEEEeChHHHH
Q psy17147 34 TKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHP--EGIHLIGYSQGGLI 84 (291)
Q Consensus 34 ~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~--~~~~lvGhS~GG~i 84 (291)
=+++++|+.|.=. ...++.+.+.|.+++.... +.+.+-=-|-||++
T Consensus 98 ~r~~VldF~Gdi~-----A~~v~~LReeisail~~a~~~DeV~~rLES~GG~V 145 (155)
T PF08496_consen 98 PRLFVLDFKGDIK-----ASEVESLREEISAILSVATPEDEVLVRLESPGGMV 145 (155)
T ss_pred CeEEEEecCCCcc-----HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcee
Confidence 4899999987433 3456677777777776554 77888888888876
No 372
>PLN02949 transferase, transferring glycosyl groups
Probab=21.30 E-value=2.9e+02 Score=25.00 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=15.0
Q ss_pred CceEEEEeChHHHHHHHHHH
Q psy17147 71 EGIHLIGYSQGGLIARGILE 90 (291)
Q Consensus 71 ~~~~lvGhS~GG~ia~~~a~ 90 (291)
..+.++|.|+|++.....+.
T Consensus 116 ~~~t~~~~~~~~~~l~~~~~ 135 (463)
T PLN02949 116 PRFTMIGQSLGSVYLAWEAL 135 (463)
T ss_pred CceehHHHHHHHHHHHHHHH
Confidence 67889999999876655444
No 373
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=21.19 E-value=3.2e+02 Score=22.96 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCChhHHHH---HHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhc
Q psy17147 4 YRPVLVIHGILSGNKTLEK---FKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQN 68 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~---~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~ 68 (291)
..|++++||-......... +.+.+.. ++.+++.++--||.--........+.+.+++.+++++
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 4689999998776433333 2233321 2457776655555543222222234455555555443
No 374
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=21.00 E-value=3.8e+02 Score=20.31 Aligned_cols=68 Identities=18% Similarity=0.071 Sum_probs=40.7
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcCCCceEEEEeChHHH
Q psy17147 4 YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNHPEGIHLIGYSQGGL 83 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~GG~ 83 (291)
+..|.|+ |++...-+...+.|.+.+||.+++..-.+-++.+. .++ +...+++.+..+++||-.+.-.
T Consensus 46 ~~~v~ll---G~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~------~~~----i~~~I~~~~pdiv~vglG~PkQ 112 (171)
T cd06533 46 GLRVFLL---GAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEE------EEE----IIERINASGADILFVGLGAPKQ 112 (171)
T ss_pred CCeEEEE---CCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhh------HHH----HHHHHHHcCCCEEEEECCCCHH
Confidence 3456554 66667778888889999999998764222222211 111 3333455566777887666654
Q ss_pred H
Q psy17147 84 I 84 (291)
Q Consensus 84 i 84 (291)
=
T Consensus 113 E 113 (171)
T cd06533 113 E 113 (171)
T ss_pred H
Confidence 4
No 375
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=20.98 E-value=5.4e+02 Score=22.09 Aligned_cols=97 Identities=19% Similarity=0.165 Sum_probs=56.6
Q ss_pred EEEcCCCCChhHHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH---------------HHHHHHHHHHHHHHHhcC--C
Q psy17147 8 LVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPM---------------WNQVLFFGSLVMKMSQNH--P 70 (291)
Q Consensus 8 vllHG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~---------------~~~~~~~~~~i~~~~~~~--~ 70 (291)
||++|+|.=....+.+++.+-.......|++++-..-+-+.+.. ..+..+.++.|...++.. .
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 67889888777777777765543111577777743333332221 113345555566656666 3
Q ss_pred CceEEEEeChHHHH--------HHHHHHhCCCCCcceEEEecCC
Q psy17147 71 EGIHLIGYSQGGLI--------ARGILEQFPNHNVRNFISLSSP 106 (291)
Q Consensus 71 ~~~~lvGhS~GG~i--------a~~~a~~~p~~~v~~li~~~~~ 106 (291)
.+++||=|+.=|.. ++..++..|+ |.=+..++.+
T Consensus 137 ~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~--I~lIASiDhi 178 (326)
T PF04084_consen 137 PPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN--IHLIASIDHI 178 (326)
T ss_pred CceEEEEECCCChhhcChHHHHHHHHHHcCCC--eEEEEeccCC
Confidence 78999999998766 3344445564 5444444443
No 376
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=20.92 E-value=2.9e+02 Score=24.58 Aligned_cols=16 Identities=13% Similarity=-0.076 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHh
Q psy17147 52 WNQVLFFGSLVMKMSQ 67 (291)
Q Consensus 52 ~~~~~~~~~~i~~~~~ 67 (291)
...+..+++.|.+.++
T Consensus 122 p~~w~~La~~I~~~~~ 137 (404)
T TIGR02153 122 PEYWIKIAEAVAKALK 137 (404)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3445556666655443
No 377
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=20.83 E-value=6e+02 Score=22.55 Aligned_cols=63 Identities=11% Similarity=0.071 Sum_probs=34.7
Q ss_pred ChhHHHHHHHHHHHhCCCcEEEEecCCCCCCC--cchHHHHHHHHHHHHHHHHhcCCCceEEEEe
Q psy17147 16 GNKTLEKFKERIERFHPGTKVVIPDNYSNWAS--LEPMWNQVLFFGSLVMKMSQNHPEGIHLIGY 78 (291)
Q Consensus 16 ~~~~~~~~~~~L~~~~~g~~v~~~D~~G~g~S--~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 78 (291)
+.......+..+...+++..++.+|+.+.=.. .......+..+.+.++.+.++++-+++++.|
T Consensus 288 t~~~i~~~~r~~~~~~~~~~lvvIDyLql~~~~~~~~~~~~~~~i~~~Lk~lAke~~i~Vi~lsQ 352 (421)
T TIGR03600 288 TVAQIRSIARRIKRKKGGLDLIVVDYIQLMAPTRGRDRNEELGGISRGLKALAKELDVPVVLLAQ 352 (421)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHhCCcEEEecc
Confidence 34455555555555444678888887642211 1122334566667777766666655555443
No 378
>PRK15453 phosphoribulokinase; Provisional
Probab=20.72 E-value=5.2e+02 Score=21.81 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=37.9
Q ss_pred CCCCCeEEEEcCCCCChh--HHHHHHHHHHHhCCCcEEEEecCCCCCC--------------------C-cchHHHHHHH
Q psy17147 1 MKRYRPVLVIHGILSGNK--TLEKFKERIERFHPGTKVVIPDNYSNWA--------------------S-LEPMWNQVLF 57 (291)
Q Consensus 1 ~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~g~~v~~~D~~G~g~--------------------S-~~~~~~~~~~ 57 (291)
|+..+++|.+=|-.|+.. .-+.+.+.|... +..+..++.-.+.+ + ..+....++.
T Consensus 1 Ms~k~piI~ItG~SGsGKTTva~~l~~if~~~--~~~~~vi~~D~yh~ydr~~~~~~~~~~~r~g~nfdhf~PdAnd~dl 78 (290)
T PRK15453 1 MSAKHPIIAVTGSSGAGTTTVKRAFEKIFRRE--NINAAVVEGDSFHRYTRPEMKAAIAKARAAGRHFSHFGPEANLFDE 78 (290)
T ss_pred CCCCCcEEEEECCCCCCHHHHHHHHHHHHhhc--CCCeEEEecccccccChhhHhhhhHHHHhcCCCCCCCCCCcccHHH
Confidence 788889999999888863 334455666543 43444443322111 1 1244555677
Q ss_pred HHHHHHHHHh
Q psy17147 58 FGSLVMKMSQ 67 (291)
Q Consensus 58 ~~~~i~~~~~ 67 (291)
+.+.+.++.+
T Consensus 79 L~~~l~~l~~ 88 (290)
T PRK15453 79 LEQLFREYGE 88 (290)
T ss_pred HHHHHHHHhc
Confidence 7777777554
No 379
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=20.69 E-value=1.5e+02 Score=25.30 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCC-CceEEEEeChHHHHHHHHHHhC
Q psy17147 59 GSLVMKMSQNHP-EGIHLIGYSQGGLIARGILEQF 92 (291)
Q Consensus 59 ~~~i~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~ 92 (291)
+-.++++.+ .+ .+-++.|-|.|+.+|..++...
T Consensus 84 ~GVlkaL~e-~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 84 VGVVRTLVE-HQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHH-cCCCCCEEEEECHHHHHHHHHHcCC
Confidence 344455343 35 5667999999999999888743
No 380
>PRK09004 FMN-binding protein MioC; Provisional
Probab=20.62 E-value=3.5e+02 Score=19.84 Aligned_cols=7 Identities=29% Similarity=0.321 Sum_probs=4.8
Q ss_pred CceEEEE
Q psy17147 71 EGIHLIG 77 (291)
Q Consensus 71 ~~~~lvG 77 (291)
.++.++|
T Consensus 83 ~~~aVfG 89 (146)
T PRK09004 83 VRFAAIG 89 (146)
T ss_pred CEEEEEe
Confidence 5677766
No 381
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=20.51 E-value=2.1e+02 Score=21.19 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=20.2
Q ss_pred HHHHHHhcCC--CceEEEEeChHHHHHHHHH
Q psy17147 61 LVMKMSQNHP--EGIHLIGYSQGGLIARGIL 89 (291)
Q Consensus 61 ~i~~~~~~~~--~~~~lvGhS~GG~ia~~~a 89 (291)
.++.+.++.. ..-.+.|.|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3444444333 4457899999999999998
No 382
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=20.43 E-value=4e+02 Score=23.60 Aligned_cols=37 Identities=8% Similarity=0.042 Sum_probs=22.8
Q ss_pred CCeEEEE----cCCCCChhHHHHHHHHHHHhCCCcEEEEecC
Q psy17147 4 YRPVLVI----HGILSGNKTLEKFKERIERFHPGTKVVIPDN 41 (291)
Q Consensus 4 ~~~vvll----HG~~~~~~~~~~~~~~L~~~~~g~~v~~~D~ 41 (291)
.+-||+| ||-+.....=..+.+.|.+.+ ||++++++-
T Consensus 44 ~~RiV~LGE~sHGt~e~~~~k~rm~r~Lvee~-Gf~~iA~EA 84 (405)
T COG2312 44 DARIVLLGEPSHGTGEFFAFKARMFRALVEEL-GFRAIAFEA 84 (405)
T ss_pred CCeEEEecCCCCCccHHHHHHHHHHHHHHHHh-CcceEEecc
Confidence 3445554 444333333345677888876 999999853
No 383
>PF06107 DUF951: Bacterial protein of unknown function (DUF951); InterPro: IPR009296 This family consists of several short hypothetical bacterial proteins of unknown function.
Probab=20.32 E-value=81 Score=19.12 Aligned_cols=50 Identities=10% Similarity=0.186 Sum_probs=28.1
Q ss_pred eEEecccccccccccchhhhhhhcC-CEEEEeeCCCCcceeecCccccccceecCC
Q psy17147 236 SVVELRDTKMYTKNSLGLRTLDKQG-KLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290 (291)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 290 (291)
.||.|+...-+-...+ ++...+ +.++. -.||||.+++-++ .|++.+...+
T Consensus 6 DiV~mKK~HPCG~~~W---ei~R~GaDikik-C~gCg~~imlpR~-~feK~~Kkvi 56 (57)
T PF06107_consen 6 DIVEMKKPHPCGSNEW---EIIRIGADIKIK-CLGCGRQIMLPRS-KFEKRLKKVI 56 (57)
T ss_pred CEEEEcCCCCCCCCEE---EEEEccCcEEEE-ECCCCCEEEEeHH-HHHHHHHHhc
Confidence 3455555444433333 222222 66666 6678999999874 4666655543
No 384
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=20.22 E-value=3.5e+02 Score=23.04 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=35.2
Q ss_pred CCeEEEEcCCCCChhHHH---HHHHHHHHhCCCcEEEEecCCCCCCCcchHHHHHHHHHHHHHHHHhcC
Q psy17147 4 YRPVLVIHGILSGNKTLE---KFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMSQNH 69 (291)
Q Consensus 4 ~~~vvllHG~~~~~~~~~---~~~~~L~~~~~g~~v~~~D~~G~g~S~~~~~~~~~~~~~~i~~~~~~~ 69 (291)
..|++++||-........ .+.+.+.. ++.++..++--||.-.........+.+.++|.+++++.
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 468999999777643322 22222211 24466666666676543333333555666666666543
Done!