RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17147
         (291 letters)



>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos
           taurus) [TaxId: 9913]}
          Length = 279

 Score =  183 bits (467), Expect = 1e-57
 Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 39/300 (13%)

Query: 5   RPVLVIHGIL---SGNKTLEKFKERIERFHPGTKVVIPDNYSNWAS--LEPMWNQVLFFG 59
            P+++ HG+        ++   K+ +E+  PG  V+  +             +  V    
Sbjct: 6   LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQV 65

Query: 60  SLVMKMSQNHPE---GIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQF 116
           + V ++    P+   G + +G+SQGG   R + ++ P+  + N IS+   H G +G  + 
Sbjct: 66  TTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRC 125

Query: 117 GHFTEDESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPGVDHF---QWHNNPTVIDQH 173
                              E+S     + K       +    +     ++ ++P   D +
Sbjct: 126 P-----------------GESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIY 168

Query: 174 KSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHF-- 231
           ++     S FL  IN       S  +K  L+ L + V++   ND+++ P  S  FG +  
Sbjct: 169 RN----HSIFLADINQERGVNES--YKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRS 222

Query: 232 TEDESVVELRDTKMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291
            + +  + L+++ +YT++ LGL+ +DK G+LV +++ G DH Q   +      H++P+L+
Sbjct: 223 GQAKETIPLQESTLYTQDRLGLKAMDKAGQLVFLALEG-DHLQL--SEEWFYAHIIPFLE 279


>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 268

 Score =  145 bits (366), Expect = 1e-42
 Identities = 99/287 (34%), Positives = 147/287 (51%), Gaps = 21/287 (7%)

Query: 4   YRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVM 63
           Y+PV+V+HG+   + +     E I   HPGT V + D +    SL P+W QV  F   V+
Sbjct: 2   YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVV 61

Query: 64  KMSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQFGHFTEDE 123
            +    P+G+HLI YSQGGL+ R +L    +HNV +FISLSSP  GQYG   +  +    
Sbjct: 62  PIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPT 121

Query: 124 SVVELRDTKMYTENSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHKSTFVCFSKF 183
           S+                        L  I            N      H   ++  S F
Sbjct: 122 SMRSN---------------------LYRICYSPWGQEFSICNYWHDPHHDDLYLNASSF 160

Query: 184 LPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDT 243
           L  IN     PN+ +++   LR+  +VLIGGP+D VITPWQSS FG +  +E+V+E+ + 
Sbjct: 161 LALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQ 220

Query: 244 KMYTKNSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYL 290
            +Y ++S GL+TL  +G +V   + G+ H  WH+N T+ +  + P+L
Sbjct: 221 LVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 267


>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
          Length = 179

 Score = 53.0 bits (126), Expect = 3e-09
 Identities = 25/173 (14%), Positives = 49/173 (28%), Gaps = 13/173 (7%)

Query: 5   RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMK 64
            PV+++HGI   +      K  +     G           W      +N        V K
Sbjct: 3   NPVVMVHGIGGASFNFAGIKSYLVSQ--GWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQK 60

Query: 65  MSQNHP-EGIHLIGYSQGGLIARGILEQFPNHN-VRNFISLSSPHGGQYGSNQFGHFTED 122
           +      + + ++ +S GG      ++     N V N ++L   +    G    G     
Sbjct: 61  VLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQ 120

Query: 123 E---SVVELRDTKMYTENSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQ 172
           +   + +      +       L           + + GV H     +  V   
Sbjct: 121 KILYTSIYSSADMIVMNYLSRLDGAR------NVQIHGVGHIGLLYSSQVNSL 167



 Score = 26.4 bits (57), Expect = 3.3
 Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 7/87 (8%)

Query: 205 RLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVELRDTKMYTKNSLGLRTLDKQGKLVL 264
           ++  +V +GG N             +     + +      +       L           
Sbjct: 94  KVANVVTLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVMNYLSRLDGAR------N 147

Query: 265 ISVPGVDHFQWHNNPTVIDQHVLPYLD 291
           + + GV H     +  V    +   L+
Sbjct: 148 VQIHGVGHIGLLYSSQVNSL-IKEGLN 173


>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 285

 Score = 53.6 bits (128), Expect = 6e-09
 Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 18/242 (7%)

Query: 6   PVLVIHGIL--SGNKTLEKFKERIERFHP-GTKVVIPDNYSNWASLEPMWNQVLFFGSLV 62
           P+++ HG+L       ++ +          G +V + +  S   + E    Q+L    + 
Sbjct: 9   PIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTE-VSQLDTSEVRGEQLLQQ--VE 65

Query: 63  MKMSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG----QYGSNQFGH 118
             ++ +    ++LIG+S GG   R +    P+       S+ +PH G     +       
Sbjct: 66  EIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIAS-ATSVGAPHKGSDTADFLRQIPPG 124

Query: 119 FTEDESVVELRD---TKMYTENSLGLRTLDKQGKLVLISVPGVDHF-QWHNN--PTVIDQ 172
              +  +  L +     +   +S    T +  G L  ++  G   F   +    PT    
Sbjct: 125 SAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQGIPTSACG 184

Query: 173 HKSTFVCFSKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFT 232
             +  V    +  +  +   T   +     L         G  ND ++    SS  G   
Sbjct: 185 EGAYKVNGVSYYSWSGSSPLTNFLDPSDAFLGASSLTFKNGTANDGLV-GTCSSHLGMVI 243

Query: 233 ED 234
            D
Sbjct: 244 RD 245


>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
           antarctica), form b [TaxId: 34362]}
          Length = 317

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 5/108 (4%)

Query: 5   RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMK 64
           +P+L++ G              I             +   +  L        +  + +  
Sbjct: 32  KPILLVPG-TGTTGPQSFDSNWIPLSTQLGYTPCWISPPPF-MLNDTQVNTEYMVNAITA 89

Query: 65  MSQNHP-EGIHLIGYSQGGLIARGILEQFP--NHNVRNFISLSSPHGG 109
           +        + ++ +SQGGL+A+  L  FP     V   ++ +  + G
Sbjct: 90  LYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 137


>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
           42739]}
          Length = 319

 Score = 41.7 bits (97), Expect = 5e-05
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 6   PVLVIHGILSGNK---TLEKFKERIERFHP-GTKVVIPDNYSNWASLEPMWNQVLFFGSL 61
           PV+++HG+   +K    ++ +          G KV + +     +   P          +
Sbjct: 10  PVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYV 69

Query: 62  VMKMSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGG 109
              ++      ++LIG+SQGGL +R +    P        ++ +PH G
Sbjct: 70  KQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVAS-VTTIGTPHRG 116


>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD
           {Pseudomonas fluorescens [TaxId: 294]}
          Length = 271

 Score = 34.8 bits (78), Expect = 0.008
 Identities = 33/243 (13%), Positives = 71/243 (29%), Gaps = 22/243 (9%)

Query: 5   RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNY---SNWASLEPMWNQVLFFGSL 61
           +PV++IHG   G      ++  I       +V+ PD              +++  +   +
Sbjct: 24  QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 83

Query: 62  VMKMSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQFGHFTE 121
           +  M     E  H++G + GG +A     ++     R  +  ++             +  
Sbjct: 84  IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY 143

Query: 122 DESVVELRDTKMYTENSLGLRTLDKQGKLVLISV-PGVDHFQWHNNPTVIDQHKSTFVCF 180
             S+  +R+          L T +        S+ PG         P    +        
Sbjct: 144 TPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASS 203

Query: 181 SKFLPFINNLNATPNSNLFKLGLLRLHRMVLIGGPNDSVITPWQSSQFGHFTEDESVVEL 240
            + +  + N                    ++I G  D V+    S + G   +   +   
Sbjct: 204 DEDIKTLPN------------------ETLIIHGREDQVVPLSSSLRLGELIDRAQLHVF 245

Query: 241 RDT 243
              
Sbjct: 246 GRC 248


>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
           harveyi [TaxId: 669]}
          Length = 302

 Score = 32.2 bits (72), Expect = 0.057
 Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 10/91 (10%)

Query: 2   KRYRPVLVIHGILSGNKTLEKFKERIERFHP-GTKVVIPDNYSNWASLEPMWNQVLF--- 57
            +   +L+  G       ++ F    E     G  V   D+  +        ++      
Sbjct: 30  FKNNTILIASGFAR---RMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTG 86

Query: 58  ---FGSLVMKMSQNHPEGIHLIGYSQGGLIA 85
                ++   +     + I LI  S    +A
Sbjct: 87  KNSLCTVYHWLQTKGTQNIGLIAASLSARVA 117


>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
          {Janthinobacterium sp. J3 [TaxId: 213804]}
          Length = 268

 Score = 29.4 bits (64), Expect = 0.50
 Identities = 10/50 (20%), Positives = 22/50 (44%)

Query: 5  RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQ 54
          +PV++IHG  +G ++   ++  I       +V+  D      + +P    
Sbjct: 23 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEY 72


>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
          hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
          1831]}
          Length = 281

 Score = 29.1 bits (63), Expect = 0.56
 Identities = 14/69 (20%), Positives = 22/69 (31%)

Query: 6  PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKM 65
           V+++HG   G      ++  I        VV PD      S  P          + M++
Sbjct: 28 AVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRV 87

Query: 66 SQNHPEGIH 74
           Q      H
Sbjct: 88 EQILGLMNH 96


>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
           radiobacter [TaxId: 358]}
          Length = 293

 Score = 28.7 bits (62), Expect = 0.71
 Identities = 6/48 (12%), Positives = 18/48 (37%)

Query: 2   KRYRPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLE 49
               PV +I G+           E + +++    +   ++  ++  +E
Sbjct: 232 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVE 279


>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris
           [TaxId: 339]}
          Length = 218

 Score = 28.3 bits (62), Expect = 1.0
 Identities = 28/171 (16%), Positives = 51/171 (29%), Gaps = 16/171 (9%)

Query: 5   RPVLVI---HGILSGNKTLEKFKERIERFHP-GTKVVIPDNYSNWASLEPMWNQVLFFGS 60
               ++        G+   +            G  VV  +  S   S     +       
Sbjct: 35  PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDD 94

Query: 61  LVMKM----SQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQF 116
           L        +Q   + + L G+S G  ++   L        +  IS++ P G    S+  
Sbjct: 95  LRAVAEWVRAQRPTDTLWLAGFSFGAYVS---LRAAAALEPQVLISIAPPAGRWDFSDVQ 151

Query: 117 GHFTEDESVVELRDTKMYTENSLGL-RTLDKQGKLVLISVPGVDHFQWHNN 166
                     +  D  +  +       TL++Q  LV +  P   HF +H  
Sbjct: 152 PPAQWLVIQGD-ADEIVDPQAVYDWLETLEQQPTLVRM--PDTSHF-FHRK 198


>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 27.0 bits (58), Expect = 2.2
 Identities = 23/177 (12%), Positives = 51/177 (28%), Gaps = 8/177 (4%)

Query: 6   PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEP----MWNQVLFFGSL 61
            VL++HGI   ++T +           G + V  D      S E        ++     L
Sbjct: 33  SVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFL 92

Query: 62  VMKMSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQYGSNQFGHFTE 121
              +         +I  S  G+ +   L    +          +P      +       +
Sbjct: 93  AAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPG--FVPVAPICTDKINAANYASVK 150

Query: 122 DESVVELRDTKMYTENSLGLRTLDKQGKLVLISVPGVDHFQWHNNPTVIDQHKSTFV 178
             +++   D     + S          +++++   G  H  + + P         F+
Sbjct: 151 TPALIVYGDQDPMGQTSFEHLKQLPNHRVLIM--KGAGHPCYLDKPEEWHTGLLDFL 205


>d2rhwa1 c.69.1.10 (A:4-286)
          2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
          (BPHD) {Burkholderia xenovorans [TaxId: 36873]}
          Length = 283

 Score = 27.1 bits (58), Expect = 2.4
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 5  RPVLVIHGILSGNKTLEKFKERIERFHP-GTKVVIPDNYSNWASLEPMWNQ 54
            V+++HG   G      +   +  F   G +V++ D+     S   + ++
Sbjct: 31 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 81


>d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826
           {Agrobacterium tumefaciens [TaxId: 358]}
          Length = 218

 Score = 26.8 bits (58), Expect = 2.5
 Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 258 KQGKLVLISVPGVDHFQWHNNPTVIDQHVLPYLD 291
           K   +   ++PG +HF ++     +      YLD
Sbjct: 175 KGILITHRTLPGANHF-FNGKVDELMGECEDYLD 207


>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH
           {Escherichia coli [TaxId: 562]}
          Length = 256

 Score = 26.7 bits (57), Expect = 2.9
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 6/107 (5%)

Query: 5   RPVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMK 64
             ++++HG     +         E       + + D      S       +         
Sbjct: 12  VHLVLLHGWGLNAEVWRCI---DEELSSHFTLHLVDLPGFGRSRGFGALSLADM---AEA 65

Query: 65  MSQNHPEGIHLIGYSQGGLIARGILEQFPNHNVRNFISLSSPHGGQY 111
           + Q  P+    +G+S GGL+A  I    P          SSP     
Sbjct: 66  VLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSAR 112


>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
          tremula), thioredoxin H [TaxId: 113636]}
          Length = 113

 Score = 25.9 bits (56), Expect = 3.6
 Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 7/82 (8%)

Query: 7  VLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKMS 66
          V+  H       T++ +KE  E+     K+++ D  ++W     M   +    +      
Sbjct: 6  VIACH-------TVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNV 58

Query: 67 QNHPEGIHLIGYSQGGLIARGI 88
                +  +           +
Sbjct: 59 TFLKVDVDELKAVAEEWNVEAM 80


>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 338

 Score = 26.7 bits (58), Expect = 3.9
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 53  NQVLFFGSLVMKMSQNHPEGIHLIGYSQGGLIARGILEQFPNH 95
            ++ F   ++       PE +HLIG+S G  +      +   H
Sbjct: 128 AEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGH 170


>d1tjla1 a.2.14.1 (A:7-110) DnaK suppressor protein DksA,
           alpha-hairpin domain {Escherichia coli [TaxId: 562]}
          Length = 104

 Score = 24.8 bits (54), Expect = 6.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 133 MYTENSLGLRTLDKQGKLV 151
              E SL LR  D++ KL+
Sbjct: 72  QEEEFSLELRNRDRERKLI 90


>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544
          {Thermus thermophilus [TaxId: 274]}
          Length = 122

 Score = 24.7 bits (53), Expect = 7.7
 Identities = 9/80 (11%), Positives = 19/80 (23%), Gaps = 9/80 (11%)

Query: 6  PVLVIHGILSGNKTLEKFKERIERFHPGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKM 65
          PVL++          E+     E    G    + D      +  P          +    
Sbjct: 23 PVLLVA---------EEASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFA 73

Query: 66 SQNHPEGIHLIGYSQGGLIA 85
             +     ++    G  + 
Sbjct: 74 VMMNLGAPWVLLRGLGLALG 93


>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
           thermophilus [TaxId: 274]}
          Length = 238

 Score = 25.5 bits (54), Expect = 8.7
 Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 20/105 (19%)

Query: 7   VLVIHGILSGNKTLEKFKERIERFH-PGTKVVIPDNYSNWASLEPMWNQVLFFGSLVMKM 65
           +L +HG L G+K  E     +  +   G  ++  D   +     P  +         +  
Sbjct: 27  LLALHG-LQGSK--EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYR 83

Query: 66  SQNH----------------PEGIHLIGYSQGGLIARGILEQFPN 94
                                  + L G S G  +A  +L +   
Sbjct: 84  VALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR 128


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0370    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,119,427
Number of extensions: 50474
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 164
Number of HSP's successfully gapped: 31
Length of query: 291
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 206
Effective length of database: 1,240,546
Effective search space: 255552476
Effective search space used: 255552476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.8 bits)