Query psy17151
Match_columns 86
No_of_seqs 22 out of 24
Neff 1.5
Searched_HMMs 29240
Date Fri Aug 16 23:15:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17151.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17151hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ufx_A KIAA1526 protein; PDZ d 97.9 1.6E-05 5.4E-10 49.1 4.6 62 15-76 8-80 (103)
2 2q9v_A Membrane-associated gua 97.0 0.001 3.5E-08 38.6 4.2 61 15-76 4-75 (90)
3 1d5g_A Human phosphatase HPTP1 96.6 0.0047 1.6E-07 36.1 5.2 62 14-75 6-80 (96)
4 2i04_A Membrane-associated gua 96.6 0.0031 1.1E-07 36.1 4.1 61 15-76 2-73 (85)
5 1wha_A KIAA0147 protein, scrib 96.6 0.0034 1.2E-07 37.6 4.4 53 11-63 5-62 (105)
6 2daz_A INAD-like protein; PDZ 96.5 0.0042 1.4E-07 38.5 4.4 48 16-63 28-75 (124)
7 1i16_A Interleukin 16, LCF; cy 96.3 0.0095 3.2E-07 37.5 5.5 63 13-76 29-105 (130)
8 2opg_A Multiple PDZ domain pro 96.3 0.0067 2.3E-07 35.5 4.4 49 15-63 6-54 (98)
9 2jil_A GRIP1 protein, glutamat 96.3 0.0042 1.4E-07 36.4 3.5 61 15-75 5-79 (97)
10 2iwn_A Multiple PDZ domain pro 96.1 0.01 3.6E-07 34.1 4.6 50 14-63 5-57 (97)
11 1wi4_A Synip, syntaxin binding 96.1 0.0094 3.2E-07 36.7 4.6 67 10-77 12-90 (109)
12 2r4h_A Membrane-associated gua 96.1 0.0081 2.8E-07 36.7 4.2 53 10-63 21-73 (112)
13 1v62_A KIAA1719 protein; struc 96.0 0.0059 2E-07 37.7 3.5 68 8-75 10-89 (117)
14 1uep_A Membrane associated gua 96.0 0.011 3.8E-07 35.4 4.5 62 14-76 10-82 (103)
15 1um1_A KIAA1849 protein, RSGI 95.9 0.013 4.3E-07 35.2 4.5 50 14-63 9-60 (110)
16 3gge_A PDZ domain-containing p 95.9 0.014 4.7E-07 37.7 4.9 59 16-77 8-77 (95)
17 2w4f_A Protein LAP4; structura 95.9 0.011 3.7E-07 34.4 4.1 50 14-64 4-58 (97)
18 1ueq_A Membrane associated gua 95.9 0.017 5.7E-07 35.8 5.1 61 15-76 21-92 (123)
19 2dkr_A LIN-7 homolog B; LIN-7B 95.9 0.015 5.3E-07 33.5 4.6 47 16-63 8-54 (93)
20 2awx_A Synapse associated prot 95.9 0.013 4.3E-07 35.1 4.4 50 14-63 4-57 (105)
21 2qg1_A Multiple PDZ domain pro 95.8 0.016 5.4E-07 33.6 4.5 48 14-63 5-53 (92)
22 2i1n_A Discs, large homolog 3; 95.8 0.014 4.8E-07 34.5 4.3 49 15-63 6-58 (102)
23 1q7x_A PDZ2B domain of PTP-BAS 95.8 0.017 5.7E-07 34.6 4.7 51 13-63 9-66 (108)
24 1v6b_A Harmonin isoform A1; st 95.8 0.01 3.4E-07 36.9 3.8 59 17-76 22-91 (118)
25 2eno_A Synaptojanin-2-binding 95.8 0.017 5.9E-07 35.4 4.7 50 14-63 18-71 (120)
26 1n7e_A AMPA receptor interacti 95.8 0.018 6.3E-07 33.8 4.7 60 14-74 6-76 (97)
27 2vwr_A Ligand of NUMB protein 95.7 0.015 5.3E-07 33.9 4.2 47 15-63 5-53 (95)
28 2ehr_A INAD-like protein; PDZ 95.7 0.025 8.5E-07 34.4 5.1 51 13-63 15-74 (117)
29 1uhp_A Hypothetical protein KI 95.7 0.024 8.3E-07 33.9 5.0 50 14-63 9-65 (107)
30 2jik_A Synaptojanin-2 binding 95.6 0.016 5.4E-07 34.2 4.0 50 14-63 8-61 (101)
31 1x6d_A Interleukin-16; PDZ dom 95.5 0.024 8.2E-07 34.6 4.7 57 20-76 23-90 (119)
32 3nfk_A Tyrosine-protein phosph 95.5 0.01 3.5E-07 35.4 3.0 65 11-76 15-92 (107)
33 2fe5_A Presynaptic protein SAP 95.5 0.022 7.4E-07 33.0 4.2 49 15-63 5-57 (94)
34 3r0h_A INAD, inactivation-NO-a 95.5 0.026 9E-07 36.4 5.0 52 12-63 17-69 (206)
35 2byg_A Channel associated prot 95.4 0.019 6.4E-07 35.7 4.1 65 11-75 22-101 (117)
36 2d92_A INAD-like protein; PDZ 95.4 0.016 5.4E-07 35.1 3.4 62 15-76 17-92 (108)
37 3gsl_A Disks large homolog 4; 95.3 0.025 8.6E-07 35.6 4.4 50 15-64 7-60 (196)
38 1uju_A Scribble; PDZ domain, c 95.3 0.027 9.3E-07 33.9 4.3 63 13-75 9-91 (111)
39 3qe1_A Sorting nexin-27, G pro 95.2 0.029 9.9E-07 33.3 4.1 59 16-75 9-89 (107)
40 3b76_A E3 ubiquitin-protein li 95.1 0.03 1E-06 35.2 4.3 61 16-76 27-101 (118)
41 1g9o_A NHE-RF; PDZ domain, com 95.1 0.038 1.3E-06 31.9 4.4 57 16-75 6-73 (91)
42 1ihj_A INAD; intermolecular di 95.1 0.013 4.4E-07 34.3 2.3 48 16-63 8-61 (98)
43 2cs5_A Tyrosine-protein phosph 95.0 0.028 9.5E-07 34.3 3.7 61 15-76 17-90 (119)
44 3o46_A Maguk P55 subfamily mem 95.0 0.033 1.1E-06 32.5 3.9 60 16-77 7-77 (93)
45 2gzv_A PRKCA-binding protein; 94.9 0.03 1E-06 34.8 3.8 60 16-76 27-98 (114)
46 2yt7_A Amyloid beta A4 precurs 94.9 0.092 3.1E-06 31.3 5.8 66 11-76 7-85 (101)
47 1qav_A Alpha-1 syntrophin (res 94.9 0.02 6.7E-07 33.2 2.8 48 15-63 6-54 (90)
48 2kpk_A Membrane-associated gua 94.9 0.012 4.2E-07 36.8 2.0 66 10-76 14-91 (129)
49 2dmz_A INAD-like protein; PDZ 94.9 0.029 1E-06 34.6 3.7 62 14-75 16-93 (129)
50 2jre_A C60-1 PDZ domain peptid 94.8 0.054 1.8E-06 32.2 4.6 52 13-64 12-69 (108)
51 3hpk_A Protein interacting wit 94.8 0.039 1.3E-06 34.0 4.1 59 17-76 23-93 (125)
52 1ujd_A KIAA0559 protein; PDZ d 94.8 0.015 5.1E-07 35.8 2.2 61 15-75 14-96 (117)
53 2g5m_B Neurabin-2; spinophilin 94.8 0.018 6.1E-07 34.7 2.5 50 14-63 5-59 (113)
54 2djt_A Unnamed protein product 94.8 0.036 1.2E-06 32.8 3.8 54 10-63 8-62 (104)
55 2dlu_A INAD-like protein; PDZ 94.8 0.054 1.9E-06 32.5 4.6 46 15-63 17-62 (111)
56 1wi2_A Riken cDNA 2700099C19; 94.7 0.048 1.6E-06 32.6 4.2 59 15-75 17-87 (104)
57 3i4w_A Disks large homolog 4; 94.6 0.041 1.4E-06 32.3 3.8 48 14-63 12-59 (104)
58 2dc2_A GOPC, golgi associated 94.6 0.02 6.8E-07 34.5 2.3 60 16-76 12-83 (103)
59 1x5q_A LAP4 protein; PDZ domai 94.5 0.058 2E-06 32.3 4.2 51 13-64 15-70 (110)
60 3cbz_A Dishevelled-2; PDZ doma 94.5 0.024 8.1E-07 34.5 2.5 62 15-76 7-81 (108)
61 4e34_A Golgi-associated PDZ an 94.5 0.024 8.2E-07 32.5 2.4 47 16-63 5-52 (87)
62 2uzc_A Human pdlim5, PDZ and L 94.4 0.027 9.1E-07 32.3 2.5 47 14-63 4-50 (88)
63 1rgw_A ZAsp protein; PDZ, cyph 94.3 0.063 2.2E-06 30.4 4.0 46 15-63 3-48 (85)
64 1kwa_A Hcask/LIN-2 protein; PD 94.3 0.096 3.3E-06 30.7 4.8 57 17-76 5-73 (88)
65 2fne_A Multiple PDZ domain pro 94.2 0.023 8E-07 35.4 2.2 67 9-75 21-100 (117)
66 2dm8_A INAD-like protein; PDZ 94.2 0.018 6.2E-07 34.7 1.6 50 14-63 18-67 (116)
67 1wf8_A Neurabin-I; PDZ domain, 94.2 0.045 1.5E-06 32.7 3.3 50 14-63 10-64 (107)
68 1tp5_A Presynaptic density pro 94.2 0.044 1.5E-06 33.2 3.3 49 14-64 15-63 (119)
69 2he4_A Na(+)/H(+) exchange reg 94.1 0.073 2.5E-06 30.7 4.0 58 16-76 7-75 (90)
70 3egg_C Spinophilin; PP1, serin 94.0 0.063 2.2E-06 36.1 4.1 51 13-63 80-135 (170)
71 1um7_A Synapse-associated prot 93.9 0.024 8.4E-07 33.7 1.7 47 15-63 17-63 (113)
72 2db5_A INAD-like protein; PDZ 93.9 0.036 1.2E-06 34.3 2.4 61 15-75 27-102 (128)
73 2q3g_A PDZ and LIM domain prot 93.9 0.042 1.4E-06 31.6 2.6 46 15-63 5-50 (89)
74 2koj_A Partitioning defective 93.7 0.11 3.8E-06 31.0 4.4 63 13-75 11-86 (111)
75 1v5q_A GRIP1 homolog, glutamat 93.6 0.15 5.1E-06 31.4 5.0 62 15-76 17-93 (122)
76 1wfg_A Regulating synaptic mem 93.5 0.046 1.6E-06 34.6 2.5 55 23-77 47-114 (131)
77 2kom_A Partitioning defective 93.4 0.14 4.8E-06 31.7 4.6 63 13-75 30-105 (121)
78 1uew_A Membrane associated gua 93.4 0.25 8.4E-06 29.9 5.6 60 16-75 13-90 (114)
79 2eeg_A PDZ and LIM domain prot 93.3 0.056 1.9E-06 31.6 2.5 46 15-63 10-55 (94)
80 3axa_A Afadin, nectin-3, prote 93.2 0.067 2.3E-06 31.8 2.8 49 14-63 12-62 (106)
81 1x5n_A Harmonin; PDZ domain, u 92.9 0.25 8.4E-06 29.6 5.0 42 20-63 23-64 (114)
82 3r68_A Na(+)/H(+) exchange reg 92.8 0.071 2.4E-06 30.8 2.5 57 16-75 8-75 (95)
83 2fcf_A Multiple PDZ domain pro 92.8 0.14 4.7E-06 30.0 3.7 61 16-76 7-87 (103)
84 1p1d_A PDZ45, glutamate recept 92.6 0.17 6E-06 32.9 4.4 63 14-76 7-84 (196)
85 2iwo_A Multiple PDZ domain pro 92.4 0.065 2.2E-06 33.5 2.0 69 8-76 19-101 (120)
86 1mfg_A ERB-B2 interacting prot 92.4 0.34 1.2E-05 28.0 5.0 46 15-63 5-57 (95)
87 4amh_A Disks large homolog 1; 92.1 0.12 4E-06 31.3 2.8 46 18-63 7-56 (106)
88 2f5y_A Regulator of G-protein 91.9 0.21 7.3E-06 28.9 3.8 54 16-75 6-70 (91)
89 2o2t_A Multiple PDZ domain pro 91.8 0.037 1.3E-06 33.5 0.4 62 14-75 21-97 (117)
90 1nf3_C PAR-6B; semi-CRIB motif 91.6 0.057 2E-06 33.7 1.1 64 12-75 28-112 (128)
91 2xkx_A Disks large homolog 4; 91.6 0.23 7.8E-06 39.5 4.8 51 14-64 60-114 (721)
92 1wg6_A Hypothetical protein (r 91.6 0.055 1.9E-06 34.0 1.0 56 21-76 34-103 (127)
93 2ego_A General receptor for ph 91.6 0.19 6.4E-06 29.4 3.3 60 16-76 7-84 (96)
94 1wfv_A Membrane associated gua 91.6 0.025 8.5E-07 33.2 -0.6 51 12-63 10-60 (103)
95 2h2b_A Tight junction protein 91.4 0.59 2E-05 27.5 5.4 48 15-64 9-62 (107)
96 1z87_A Alpha-1-syntrophin; pro 91.3 0.068 2.3E-06 38.9 1.4 61 15-76 79-151 (263)
97 3l4f_D SH3 and multiple ankyri 91.0 0.47 1.6E-05 30.0 5.0 59 16-75 30-111 (132)
98 2vsp_A PDZ domain-containing p 90.9 0.1 3.6E-06 30.2 1.7 58 16-76 6-74 (91)
99 2pa1_A PDZ and LIM domain prot 90.9 0.19 6.5E-06 28.7 2.8 59 15-76 4-73 (87)
100 2dls_A PDZ-rhogef, RHO guanine 90.9 0.59 2E-05 27.2 5.0 42 16-63 11-52 (93)
101 2qt5_A Glutamate receptor-inte 90.8 0.38 1.3E-05 31.1 4.5 50 13-63 7-57 (200)
102 1wf7_A Enigma homologue protei 90.7 0.075 2.6E-06 31.6 0.9 46 15-63 7-52 (103)
103 3sfj_A TAX1-binding protein 3; 90.6 0.22 7.4E-06 29.2 2.9 38 25-63 20-68 (104)
104 2lob_A Golgi-associated PDZ an 90.0 0.048 1.7E-06 33.9 0.0 46 17-63 31-77 (112)
105 2pkt_A PDZ and LIM domain prot 90.5 0.2 6.7E-06 28.9 2.6 46 16-64 6-51 (91)
106 2edp_A Fragment, shroom family 90.3 0.075 2.6E-06 31.6 0.7 46 17-63 13-59 (100)
107 2v90_A PDZ domain-containing p 90.3 0.31 1.1E-05 28.3 3.4 59 16-75 6-76 (96)
108 2iwq_A Multiple PDZ domain pro 90.2 0.28 9.7E-06 30.7 3.3 61 16-76 27-107 (123)
109 1r6j_A Syntenin 1; PDZ, membra 90.0 0.28 9.7E-06 29.9 3.1 51 16-75 7-69 (82)
110 3k1r_A Harmonin; protein-prote 89.8 0.27 9.1E-06 32.5 3.1 59 15-75 86-156 (192)
111 2kjd_A Sodium/hydrogen exchang 89.7 0.44 1.5E-05 29.0 3.9 58 16-76 12-80 (128)
112 1m5z_A GRIP, AMPA receptor int 89.5 0.57 2E-05 26.7 4.1 48 14-64 7-56 (91)
113 2jxo_A Ezrin-radixin-moesin-bi 89.4 0.56 1.9E-05 27.2 4.0 57 17-76 13-80 (98)
114 2eeh_A PDZ domain-containing p 89.1 0.45 1.5E-05 28.0 3.5 46 16-63 13-59 (100)
115 2qt5_A Glutamate receptor-inte 89.1 0.9 3.1E-05 29.3 5.2 62 14-75 107-182 (200)
116 3gsl_A Disks large homolog 4; 89.0 0.66 2.3E-05 29.0 4.4 63 14-76 101-178 (196)
117 2kv8_A RGS12, regulator of G-p 89.0 0.19 6.6E-06 28.4 1.7 54 16-75 5-69 (83)
118 1y7n_A Amyloid beta A4 precurs 88.6 0.51 1.8E-05 28.1 3.5 57 10-75 9-77 (90)
119 2d90_A PDZ domain containing p 88.1 0.64 2.2E-05 27.3 3.7 57 16-75 9-76 (102)
120 2csj_A TJP2 protein; PDZ domai 88.0 0.65 2.2E-05 28.1 3.8 48 14-63 15-68 (117)
121 3ngh_A PDZ domain-containing p 87.8 0.59 2E-05 27.5 3.4 45 16-63 4-49 (106)
122 1n7t_A 99-MER peptide of densi 87.7 0.57 2E-05 27.5 3.3 47 14-63 12-65 (103)
123 1uit_A Human discs large 5 pro 87.2 0.82 2.8E-05 27.5 3.8 45 16-64 22-66 (117)
124 2vz5_A TAX1-binding protein 3; 86.9 0.49 1.7E-05 30.3 2.9 59 16-75 26-110 (139)
125 1wif_A RSGI RUH-020, riken cDN 86.7 0.39 1.3E-05 31.1 2.3 60 13-76 27-97 (126)
126 1qau_A Neuronal nitric oxide s 86.6 1.1 3.7E-05 26.6 4.1 59 15-75 3-73 (112)
127 1va8_A Maguk P55 subfamily mem 86.4 0.89 3E-05 27.5 3.7 57 16-76 28-96 (113)
128 1q3o_A Shank1; PDZ, GKAP, pept 86.3 1.5 5.1E-05 26.0 4.6 58 17-75 11-91 (109)
129 3e17_A Tight junction protein 86.2 0.8 2.8E-05 26.7 3.3 56 15-77 2-70 (88)
130 3khf_A Microtubule-associated 86.2 0.53 1.8E-05 27.4 2.5 58 16-74 5-79 (99)
131 1uez_A KIAA1526 protein; PDZ d 85.6 0.82 2.8E-05 26.7 3.2 44 17-62 12-57 (101)
132 2qkv_A Inactivation-NO-after-p 85.4 0.72 2.5E-05 27.1 2.9 50 11-64 6-56 (96)
133 2e7k_A Maguk P55 subfamily mem 85.1 0.72 2.5E-05 27.0 2.8 56 17-76 10-76 (91)
134 2la8_A Inactivation-NO-after-p 85.0 0.92 3.2E-05 27.6 3.3 46 15-64 4-50 (106)
135 2ejy_A 55 kDa erythrocyte memb 84.9 1.1 3.9E-05 27.4 3.7 58 16-76 15-84 (97)
136 1uf1_A KIAA1526 protein; PDZ d 84.4 1.9 6.4E-05 26.4 4.5 46 16-63 23-69 (128)
137 2z17_A Pleckstrin homology SEC 84.2 1.6 5.4E-05 25.7 4.0 60 16-76 18-95 (104)
138 3tsv_A Tight junction protein 84.2 1.4 4.7E-05 27.5 3.9 46 15-64 30-75 (124)
139 3kzd_A TIAM-1, T-lymphoma inva 83.8 1.3 4.5E-05 27.7 3.7 48 16-64 9-59 (94)
140 1vb7_A PDZ and LIM domain 2; P 83.1 0.21 7.3E-06 29.1 -0.2 62 13-76 4-77 (94)
141 2krg_A Na(+)/H(+) exchange reg 82.7 1.4 4.8E-05 30.7 3.9 57 16-75 12-79 (216)
142 2eei_A PDZ domain-containing p 81.7 0.82 2.8E-05 26.9 2.0 44 16-62 11-54 (106)
143 1b8q_A Protein (neuronal nitri 80.2 1.2 4E-05 27.2 2.4 60 14-75 9-80 (127)
144 3suz_A Amyloid beta A4 precurs 78.7 0.95 3.3E-05 33.5 2.0 55 10-64 201-257 (388)
145 2vsv_A Rhophilin-2; scaffold p 77.9 2.5 8.5E-05 26.3 3.5 55 16-76 26-91 (109)
146 3tsz_A Tight junction protein 75.7 2.1 7E-05 32.1 3.1 43 16-63 12-54 (391)
147 2d8i_A T-cell lymphoma invasio 75.7 1.2 4E-05 28.0 1.5 48 15-63 17-67 (114)
148 1whd_A RGS3, regulator of G-pr 74.4 1 3.5E-05 26.6 0.9 56 14-75 16-82 (100)
149 2rcz_A Tight junction protein 74.3 2.5 8.4E-05 23.0 2.5 47 22-75 11-68 (81)
150 2eaq_A LIM domain only protein 72.8 4.3 0.00015 22.9 3.3 43 15-62 5-50 (90)
151 2xkx_A Disks large homolog 4; 72.7 4.5 0.00015 32.1 4.5 58 16-75 310-378 (721)
152 3cyy_A Tight junction protein 71.0 5.5 0.00019 22.3 3.5 54 15-75 4-70 (92)
153 3bpu_A Membrane-associated gua 70.9 12 0.0004 21.0 5.1 56 15-75 5-71 (88)
154 1v5l_A PDZ and LIM domain 3; a 69.2 0.96 3.3E-05 26.7 -0.0 59 15-76 7-76 (103)
155 3r0h_A INAD, inactivation-NO-a 68.2 4.2 0.00015 25.9 2.9 45 15-63 115-160 (206)
156 2qbw_A PDZ-fibronectin fusion 64.0 7.7 0.00026 24.5 3.5 38 25-64 3-47 (195)
157 3shw_A Tight junction protein 61.6 7.2 0.00025 30.6 3.6 54 17-75 5-69 (468)
158 1wh1_A KIAA1095 protein; PDZ d 61.2 6.3 0.00021 24.0 2.6 51 25-75 33-93 (124)
159 2edv_A FERM and PDZ domain-con 59.6 6 0.00021 23.1 2.2 42 15-63 10-53 (96)
160 2edz_A PDZ domain-containing p 57.4 10 0.00034 22.6 3.0 51 22-75 23-84 (114)
161 1w9e_A Syntenin 1; cell adhesi 51.2 15 0.00052 23.0 3.2 44 16-64 7-51 (166)
162 2f2l_A Peptidoglycan-recogniti 50.9 7.9 0.00027 26.0 1.9 20 22-41 94-113 (167)
163 1vae_A Rhophilin 2, rhophilin, 50.1 4 0.00014 25.1 0.3 54 17-76 19-83 (111)
164 2yuy_A RHO GTPase activating p 49.1 5.9 0.0002 24.2 1.0 59 16-75 11-107 (126)
165 2f2l_X Peptidoglycan recogniti 44.5 13 0.00046 24.7 2.3 37 3-39 64-110 (167)
166 1sk4_A Peptidoglycan recogniti 40.7 16 0.00056 23.9 2.2 37 3-39 62-108 (163)
167 2rkq_A Peptidoglycan-recogniti 40.2 17 0.00058 24.1 2.2 37 3-39 65-111 (169)
168 4fei_A Heat shock protein-rela 38.6 16 0.00056 21.9 1.8 18 11-28 83-100 (102)
169 2xz4_A Peptidoglycan-recogniti 38.5 19 0.00064 24.1 2.3 37 3-39 71-117 (180)
170 1sxr_A Peptidoglycan recogniti 37.5 19 0.00066 24.5 2.2 37 3-39 74-120 (183)
171 3suz_A Amyloid beta A4 precurs 32.7 9.3 0.00032 28.1 0.0 33 22-63 306-338 (388)
172 1s2j_A Peptidoglycan recogniti 32.3 25 0.00086 24.6 2.2 37 3-39 100-146 (209)
173 1yck_A Peptidoglycan recogniti 30.1 23 0.00077 23.7 1.6 18 22-39 102-119 (175)
174 2nut_A Protein transport prote 28.5 27 0.00093 28.5 2.1 17 35-51 701-717 (769)
175 2cb3_A Peptidoglycan-recogniti 28.2 25 0.00087 23.4 1.6 37 3-39 68-114 (175)
176 2wzn_A TET3, 354AA long hypoth 27.5 76 0.0026 19.6 3.6 32 3-36 43-74 (354)
177 1oht_A CG14704 protein; peptid 26.5 36 0.0012 23.8 2.2 37 3-39 76-122 (215)
178 3ep1_A PGRP-HD - peptidoglycan 22.8 48 0.0017 23.0 2.2 20 22-41 107-126 (176)
179 3soe_A Membrane-associated gua 22.6 1E+02 0.0034 19.6 3.6 56 14-76 13-79 (113)
180 2rjz_A PILO protein; structura 21.7 24 0.00084 23.2 0.5 9 39-47 101-109 (147)
181 1m2o_A SEC23, protein transpor 21.5 44 0.0015 27.2 2.0 18 35-52 703-720 (768)
182 3aab_A Putative uncharacterize 20.6 28 0.00094 21.5 0.5 14 11-24 104-117 (123)
No 1
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.90 E-value=1.6e-05 Score=49.09 Aligned_cols=62 Identities=39% Similarity=0.485 Sum_probs=53.7
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
-.|+++|...-||+.|.||....+|+|.|..|..++.|+.+|+|+.|-. +++.|+..-|+++
T Consensus 8 ~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 8 TLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp EEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred EEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 3577888888999999999999999999999999999999999988753 4677887777765
No 2
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=96.99 E-value=0.001 Score=38.56 Aligned_cols=61 Identities=13% Similarity=0.085 Sum_probs=47.9
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
..|++.|...-||+.+.||.....| ..|..+..++.|+.+|+|+.|-. .++.++..-++.+
T Consensus 4 ~~v~l~~~~~g~G~~~~~g~~~~~~-~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2q9v_A 4 QDIFLWRKETGFGFRILGGNEPGEP-IYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQA 75 (90)
T ss_dssp EEEEEECBTTBCCEEEEECSSTTSC-EEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred EEEEEEECCCccCEEEEccccCCCC-EEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3578888888999999999877777 68889999999999999998753 3455555555543
No 3
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=96.63 E-value=0.0047 Score=36.09 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=47.4
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
...|.+.|...-||+.+.||.++.. .-..|..+..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 6 ~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 6 IFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp EEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred EEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567788888999999999987653 45678899999999999999887533 45566555543
No 4
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=96.58 E-value=0.0031 Score=36.12 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=47.6
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
++|++.|...-||+.+.||.....+ ..|..+..++.|+.+|+|+.|-.. ++.|+..-++.+
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~-~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 73 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEF-LQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 73 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBC-EEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEECCCCCCEEEEcccCCCCC-EEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 5788889988999999998764433 588899999999999999987643 456666555544
No 5
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=96.56 E-value=0.0034 Score=37.65 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=42.9
Q ss_pred cccceEEEEeccCCceeeEEecCCCC-----CCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 11 VQGQLRITVKKSRPLLGMAIEGGANT-----KHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 11 ~~Gnl~i~V~K~~~~LGIAIEGGaNT-----RqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..-.+.|++.|...-||+.|.||... ..+-..|..|..++.|+.+|+|+.|-.
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 62 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDR 62 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCE
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCE
Confidence 34457888888888899999999873 234567889999999999999988754
No 6
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=96.47 E-value=0.0042 Score=38.52 Aligned_cols=48 Identities=13% Similarity=0.186 Sum_probs=40.7
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|...-||+.|.||.....+-..|..+..++.|+.+|+|+.|-.
T Consensus 28 ~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 75 (124)
T 2daz_A 28 IIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDE 75 (124)
T ss_dssp EEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCE
T ss_pred EEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 588888888999999999776555567889999999999999998754
No 7
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=96.31 E-value=0.0095 Score=37.53 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=49.4
Q ss_pred cceEEEEeccCCceeeEEecCCCC---CCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 13 GQLRITVKKSRPLLGMAIEGGANT---KHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEGGaNT---RqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
....|++.|...-||+.|.||... ..| ..|..|..|+.|+.+|.|+.|-. +++.|+..-|+.+
T Consensus 29 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~-i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 29 TVCTVTLEKMSAGLGFSLEGGKGSLHGDKP-LTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp EEEEEEEETTSSSTTEEEECCCCCSSSCCC-CEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred cEEEEEEEcCCCccCEEEecCcCCCCCCCC-EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 445678888888899999999873 334 67899999999999999998864 3567777666654
No 8
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=96.29 E-value=0.0067 Score=35.54 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=40.8
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|...-||+.+.||.....+=..|..+..++.|+.+|+|+.|-.
T Consensus 6 ~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~ 54 (98)
T 2opg_A 6 TTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQ 54 (98)
T ss_dssp EEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCE
T ss_pred EEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCE
Confidence 4678888888899999999876544567889999999999998998753
No 9
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=96.29 E-value=0.0042 Score=36.38 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=46.4
Q ss_pred eEEEEeccCCceeeEEecCCCCC---CCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTK---HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTR---qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
..|++.|...-||+.+.||.... ..-..|..|..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 5 ~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 5 VEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp EEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56788888889999999997654 233568889999999999999987632 35666655554
No 10
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=96.13 E-value=0.01 Score=34.10 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=40.2
Q ss_pred ceEEEEeccCCceeeEEecCCCCC---CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTK---HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTR---qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.+++++...-||+.+.++.+.. ..-..|..+..++.|+.+|+|+.|-.
T Consensus 5 ~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~ 57 (97)
T 2iwn_A 5 TFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQ 57 (97)
T ss_dssp EEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCE
T ss_pred EEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCE
Confidence 467888888889999999986643 33467888999999999998988754
No 11
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=96.11 E-value=0.0094 Score=36.67 Aligned_cols=67 Identities=25% Similarity=0.255 Sum_probs=50.9
Q ss_pred ccccceEEEEeccCCceeeEEecCCCCCC-CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhcc
Q psy17151 10 EVQGQLRITVKKSRPLLGMAIEGGANTKH-PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSSR 77 (86)
Q Consensus 10 d~~Gnl~i~V~K~~~~LGIAIEGGaNTRq-PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~~ 77 (86)
+....-.|++.|. .-||+.|.||..... |-..|..|..+|.|+.+|+|+.|-. +++.|+..-|+.+.
T Consensus 12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 12 RDPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 3444556888887 679999999987543 4468889999999999999988754 34677777777654
No 12
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=96.09 E-value=0.0081 Score=36.74 Aligned_cols=53 Identities=6% Similarity=0.155 Sum_probs=41.6
Q ss_pred ccccceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 10 EVQGQLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 10 d~~Gnl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+..-...|++.|...-||+.+.||.....+ ..|..|..++.|+.+|+|+.|-.
T Consensus 21 ~~~~~~~v~l~~~~~glG~~l~~~~~~~~g-v~V~~V~~~spA~~aG~L~~GD~ 73 (112)
T 2r4h_A 21 QSMDFYTVELERGAKGFGFSLRGGREYNMD-LYVLRLAEDGPAERSGKMRIGDE 73 (112)
T ss_dssp --CCEEEEEEECBTTBTSEEEEECGGGTCC-EEEEEECTTSHHHHTTCCCTTCE
T ss_pred CCCceEEEEEEcCCCccCEEEeccccCCCC-EEEEEECCCChHHHcCCCCCCCE
Confidence 344456788888888899999998765444 37889999999999999998754
No 13
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=96.05 E-value=0.0059 Score=37.75 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=52.8
Q ss_pred eeccccceEEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 8 ISEVQGQLRITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 8 v~d~~Gnl~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
+..+.+-+.|.+.|.. .-||+.+.++.....+--.|..|..++.|+.+|+|+.|-. .++.|+..-++.
T Consensus 10 ~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 89 (117)
T 1v62_A 10 VANASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS 89 (117)
T ss_dssp SCCSSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS
T ss_pred ccCCCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3557788999999987 6899999998664433357889999999999999998753 457777766663
No 14
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=96.01 E-value=0.011 Score=35.39 Aligned_cols=62 Identities=15% Similarity=0.178 Sum_probs=47.1
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
...|++.|...-||+.+.||.....| ..|..|..++.|+.+|+|+.|-.. ++.|+..-++.+
T Consensus 10 ~~~v~l~~~~~g~G~~i~~g~~~~~~-~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 10 ELDVHLRRMESGFGFRILGGDEPGQP-ILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp EECCEEESSSSSCCEEECCCCSTTSC-CBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred EEEEEEEeCCCccCEEEeeecCCCCC-eEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34567778888899999999876555 478899999999999999987543 456666555543
No 15
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.93 E-value=0.013 Score=35.25 Aligned_cols=50 Identities=14% Similarity=0.168 Sum_probs=40.6
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|...-||+.+.||..+.. +--.|..|..++.|+.+|+|+.|-.
T Consensus 9 ~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 60 (110)
T 1um1_A 9 VFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDR 60 (110)
T ss_dssp EEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCE
T ss_pred EEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCE
Confidence 4568888888899999999987642 3356788999999999999988753
No 16
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=95.93 E-value=0.014 Score=37.74 Aligned_cols=59 Identities=22% Similarity=0.259 Sum_probs=45.2
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhcc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSSR 77 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~~ 77 (86)
.|.+.|+..-||+.|.|+ ++ ...-|-.|-.||.|+.||+|.+|-+. +-.|+-+-+++.+
T Consensus 8 ~V~l~K~~~~LG~tI~~~-g~--g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~ 77 (95)
T 3gge_A 8 EVNVYKSEDSLGLTITDN-GV--GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK 77 (95)
T ss_dssp EEEEECCSSCCCEEEECS-SS--SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred EEEEEECCCCceEEEEcC-CC--CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC
Confidence 477889999999999975 22 23468999999999999999999775 4456655555543
No 17
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=95.93 E-value=0.011 Score=34.44 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=39.7
Q ss_pred ceEEEEeccCCceeeEEecCCCCC-----CCCceEEEEcCCCceeccCCCCCceee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTK-----HPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTR-----qPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.+.+.+.+...-||+.|.||.... ..-..|..+..++.|+.+| |+.|-..
T Consensus 4 ~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I 58 (97)
T 2w4f_A 4 ELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKL 58 (97)
T ss_dssp EEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEE
T ss_pred EEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 367888888999999999998753 2334677899999999998 8887643
No 18
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.90 E-value=0.017 Score=35.84 Aligned_cols=61 Identities=20% Similarity=0.161 Sum_probs=48.3
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
+.|++.|...-||+.+.||.....+ -.|..|..++.|+.+|+|+.|-. +++.|+..-|+..
T Consensus 21 ~~v~l~~~~~glG~~~~~g~~~~~g-v~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (123)
T 1ueq_A 21 LSTTLKKSNMGFGFTIIGGDEPDEF-LQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSV 92 (123)
T ss_dssp EEEEEECCTTSCSEEEECCSSSSCC-CEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTS
T ss_pred EEEEEEeCCCceeEEEecccCCCCC-EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 5688899988999999998775544 57889999999999999998753 2566776666653
No 19
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.90 E-value=0.015 Score=33.52 Aligned_cols=47 Identities=17% Similarity=0.179 Sum_probs=38.8
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|...-||+.+.||.....+ ..|..+..++.|+.+|.|+.|-.
T Consensus 8 ~v~l~k~~~glG~~l~~~~~~~~~-~~V~~V~~~spA~~aGgl~~GD~ 54 (93)
T 2dkr_A 8 VVELPKTDEGLGFNIMGGKEQNSP-IYISRVIPGGVADRHGGLKRGDQ 54 (93)
T ss_dssp EEEEECCTTCCCEEEECSSSSSCC-CEEEEECTTSHHHHHCCCCTTCB
T ss_pred EEEEEeCCCCccEEEecccCCCCC-EEEEEECCCCHHHHcCCCCCCCE
Confidence 367788888999999998765544 57889999999999998988753
No 20
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=95.89 E-value=0.013 Score=35.10 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=40.1
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
-..|++.|...-||+.|.||..... .-..|..+..++.|+.+|+|+.|-.
T Consensus 4 ~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 57 (105)
T 2awx_A 4 IMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDK 57 (105)
T ss_dssp EEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred EEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCE
Confidence 4678888888899999999986432 1346778999999999999998754
No 21
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=95.85 E-value=0.016 Score=33.55 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=38.6
Q ss_pred ceEEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|++.|. ..-||+.+.|+.+. +-..|..+..++.|+.+|+|+.|-.
T Consensus 5 ~~~v~l~k~~~~~lG~~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~ 53 (92)
T 2qg1_A 5 TLTIGLQKKPGKGLGLSIVGKRND--TGVFVSDIVKGGIADADGRLMQGDQ 53 (92)
T ss_dssp EEEEEEECCTTSCCSEEEECCSSS--CSCEEEEECTTSHHHHHTCCCTTCE
T ss_pred EEEEEEEeCCCCcccEEEEeccCC--CCEEEEEECCCCHHHHcCCCCCCCE
Confidence 567888875 47799999998652 3456889999999999999998754
No 22
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=95.82 E-value=0.014 Score=34.50 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=39.3
Q ss_pred eEEEEeccCCceeeEEecCCCCC----CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTK----HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTR----qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|...-||+.|.||.... .+-..|..+..++.|+.+|+|+.|-.
T Consensus 6 ~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 58 (102)
T 2i1n_A 6 EEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDC 58 (102)
T ss_dssp EEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred EEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCE
Confidence 45778888888999999998652 23456888999999999999998753
No 23
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.82 E-value=0.017 Score=34.60 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=41.6
Q ss_pred cceEEEEeccCCceeeEEe-----cCCCCC--CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 13 GQLRITVKKSRPLLGMAIE-----GGANTK--HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIE-----GGaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
....|++.|...-||+.|. ||.... ..-..|..+..++.|+.+|+|+.|-.
T Consensus 9 ~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 66 (108)
T 1q7x_A 9 DIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDR 66 (108)
T ss_dssp SEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCE
T ss_pred cEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCE
Confidence 3467888888889999999 998764 34467889999999999999988753
No 24
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=95.80 E-value=0.01 Score=36.88 Aligned_cols=59 Identities=15% Similarity=0.240 Sum_probs=46.1
Q ss_pred EEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 17 ITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
++++|.. -||+.|.||..+..+-..|..|.++|.|+.+|.|+.|-. +++.|+.+.|+..
T Consensus 22 ~~~~~~~-glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 22 LRIKKEG-SLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp EEEESCS-CCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred EEECCCC-ccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 3445554 699999999887766678999999999999999998753 3567777777654
No 25
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.79 E-value=0.017 Score=35.39 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=40.1
Q ss_pred ceEEEEeccCCceeeEEecCCCCC----CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTK----HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTR----qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|...-||+.|.||.... ..-..|..|..++.|+.+|+|+.|-.
T Consensus 18 ~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 71 (120)
T 2eno_A 18 EEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDK 71 (120)
T ss_dssp EEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCE
T ss_pred eEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCE
Confidence 346788888899999999998753 22346788999999999999998754
No 26
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=95.77 E-value=0.018 Score=33.81 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=45.9
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhh
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIR 74 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~ 74 (86)
...|+++|...-||+.+.|+.....+ ..|..+..++.|+.+|+|+.|-. +++.++..-++
T Consensus 6 ~~~v~l~~~~~~lG~~i~~~~~~~~~-~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 76 (97)
T 1n7e_A 6 IYTVELKRYGGPLGITISGTEEPFDP-IIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ 76 (97)
T ss_dssp EEEEEEECTTSCCCEEEECCSSTTSC-CEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEeCCCCcCEEEEcccCCCCC-EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35678888877799999998754343 57889999999999998988753 24677766665
No 27
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=95.75 E-value=0.015 Score=33.90 Aligned_cols=47 Identities=13% Similarity=0.220 Sum_probs=37.2
Q ss_pred eEEEEeccC--CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSR--PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~--~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+.|++.|.. .-||+.+.|+... +=..|..+..++.|+.+|+|+.|-.
T Consensus 5 ~~v~l~k~~~~~~lG~~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~ 53 (95)
T 2vwr_A 5 LQVALHKRDSGEQLGIKLVRRTDE--PGVFILDLLEGGLAAQDGRLSSNDR 53 (95)
T ss_dssp EEEEEECSSTTCCCCEEEEECSSS--CSEEEEEECTTSHHHHHCCCCTTCE
T ss_pred EEEEEEECCCCCcccEEEEeccCC--CCEEEEEeCCCChHHHCCCCCCCCE
Confidence 567888764 4599999998663 3456778999999999999998764
No 28
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=95.67 E-value=0.025 Score=34.39 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=39.6
Q ss_pred cceEEEEecc-CCceeeEEecCCCCCC--------CCceEEEEcCCCceeccCCCCCcee
Q psy17151 13 GQLRITVKKS-RPLLGMAIEGGANTKH--------PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 13 Gnl~i~V~K~-~~~LGIAIEGGaNTRq--------PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+--.|++.|. ..-||+.|.||..... +-..|..|..++.|+.+|+|+.|-.
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 74 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDK 74 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCE
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCE
Confidence 3345777777 3789999999987643 2346888999999999999998753
No 29
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.65 E-value=0.024 Score=33.94 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=39.8
Q ss_pred ceEEEEeccCCceeeEEecCCCC-------CCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANT-------KHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNT-------RqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|...-||+.|.||... ..+-..|..|..++.|+.+|.|+.|-.
T Consensus 9 ~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~ 65 (107)
T 1uhp_A 9 SLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDR 65 (107)
T ss_dssp EEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCE
T ss_pred EEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCE
Confidence 35688888888999999999753 233456778999999999988998753
No 30
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=95.64 E-value=0.016 Score=34.21 Aligned_cols=50 Identities=14% Similarity=0.172 Sum_probs=39.7
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|...-||+.+.||..... .-..|..+..++.|+.+|.|+.|-.
T Consensus 8 ~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 61 (101)
T 2jik_A 8 EEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDK 61 (101)
T ss_dssp EEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred cEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCE
Confidence 3457888888999999999987642 2346778999999999998988754
No 31
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=95.54 E-value=0.024 Score=34.56 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=43.0
Q ss_pred eccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 20 KKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 20 ~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
++...-||+.|.||.....+-..|..|..++.|+.+|+|+.|-. .++.++..-++.+
T Consensus 23 ~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 90 (119)
T 1x6d_A 23 KEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 90 (119)
T ss_dssp CCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT
T ss_pred eCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 33467899999999887656678899999999999999988752 2456665555443
No 32
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=95.54 E-value=0.01 Score=35.36 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=47.8
Q ss_pred cccceEEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCC-CCCceee-----------ehhhhhhhhhhc
Q psy17151 11 VQGQLRITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQ-IPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 11 ~~Gnl~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgq-Lkv~~~~-----------~~~~~~~~~~~~ 76 (86)
+++...+++.|.. .-+|+.+.||.....| +.|..|..++.|+.+|+ |+.|-.. ++.++..-|+.+
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~-~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYDQKMP-VIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGGGTEE-EEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCCCCCC-eEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 4567778887776 7899999999775433 46888999999999995 9987543 455555555554
No 33
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=95.52 E-value=0.022 Score=32.95 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=38.2
Q ss_pred eEEEEeccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|...-||+.|.||..... .-..|..+..++.|+.+|+|+.|-.
T Consensus 5 ~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~ 57 (94)
T 2fe5_A 5 MEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDR 57 (94)
T ss_dssp EEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCE
Confidence 457788888889999999976432 1246778999999999998988753
No 34
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=95.50 E-value=0.026 Score=36.43 Aligned_cols=52 Identities=15% Similarity=0.216 Sum_probs=43.0
Q ss_pred ccceEEEEeccCCceeeEEecCCCCCCC-CceEEEEcCCCceeccCCCCCcee
Q psy17151 12 QGQLRITVKKSRPLLGMAIEGGANTKHP-LPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 12 ~Gnl~i~V~K~~~~LGIAIEGGaNTRqP-LPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.....|++.|...-||+.|.||..+..+ =..|..|..++.|..+|+|+.|-.
T Consensus 17 ~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~ 69 (206)
T 3r0h_A 17 NKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDH 69 (206)
T ss_dssp TSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred CCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCE
Confidence 3456788999999999999999988552 246778999999999999998854
No 35
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=95.45 E-value=0.019 Score=35.69 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=48.5
Q ss_pred cccceEEEEeccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 11 VQGQLRITVKKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 11 ~~Gnl~i~V~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.+....|++.|...-||+.|.||..... .-..|..|..+|.|+.+|+|+.|-.. ++.++..-+++
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4455677888888999999999976432 12467899999999999999987543 56666666654
No 36
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=95.36 E-value=0.016 Score=35.09 Aligned_cols=62 Identities=10% Similarity=-0.015 Sum_probs=47.1
Q ss_pred eEEEEeccCCceeeEEecCCCCC---CCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTK---HPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTR---qPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
..|++.|...-||+.|.||...- .+-..|..|..+|.|+.+|+|++|-. .++.|+..-|+.+
T Consensus 17 ~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 17 KIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp EEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred EEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 46888888889999999987632 22345778999999999999998864 3566776666653
No 37
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=95.34 E-value=0.025 Score=35.56 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=41.4
Q ss_pred eEEEEeccCCceeeEEecCCCCC----CCCceEEEEcCCCceeccCCCCCceee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTK----HPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTR----qPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
..|++.+...-||+.|.||..+. .+-..|..|..++.|..+|+|+.|-..
T Consensus 7 ~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I 60 (196)
T 3gsl_A 7 EEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSI 60 (196)
T ss_dssp EEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred EEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEE
Confidence 46788888888999999998763 345678899999999999999988543
No 38
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.27 E-value=0.027 Score=33.93 Aligned_cols=63 Identities=21% Similarity=0.225 Sum_probs=45.9
Q ss_pred cceEEEEeccC-CceeeEEecCCCCC--------CCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhh
Q psy17151 13 GQLRITVKKSR-PLLGMAIEGGANTK--------HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSD 72 (86)
Q Consensus 13 Gnl~i~V~K~~-~~LGIAIEGGaNTR--------qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~ 72 (86)
+.-.|++.|.. .-||+.|.||.... ..-..|..|..++.|+.+|+|+.|-.. ++.|+...
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 44567787775 78999999998542 112468899999999999988877542 56666666
Q ss_pred hhh
Q psy17151 73 IRS 75 (86)
Q Consensus 73 ~~~ 75 (86)
++.
T Consensus 89 l~~ 91 (111)
T 1uju_A 89 LRS 91 (111)
T ss_dssp HSS
T ss_pred HHc
Confidence 554
No 39
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=95.18 E-value=0.029 Score=33.35 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=45.3
Q ss_pred EEEEeccCCceeeEEecCCCCC-----------CCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTK-----------HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDI 73 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTR-----------qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~ 73 (86)
.|++.|...-||+.+.|+.+.. .|...|..+..++.|+.+| |+.|--+ ++.++..-+
T Consensus 9 ~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 87 (107)
T 3qe1_A 9 VVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLI 87 (107)
T ss_dssp EEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5778888888999999995544 4455688999999999998 8887533 567777666
Q ss_pred hh
Q psy17151 74 RS 75 (86)
Q Consensus 74 ~~ 75 (86)
++
T Consensus 88 ~~ 89 (107)
T 3qe1_A 88 RA 89 (107)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 40
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=95.11 E-value=0.03 Score=35.24 Aligned_cols=61 Identities=21% Similarity=0.260 Sum_probs=44.5
Q ss_pred EEEEecc-CCceeeEEecCCCCC--CCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 16 RITVKKS-RPLLGMAIEGGANTK--HPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~-~~~LGIAIEGGaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.|++.|. ..-||+.|.||..+. ..-..|..|..+|.|..+|+|+.|-. .++.|+..-++.+
T Consensus 27 ~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 27 VVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred EEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4556666 478999999998642 22247889999999999999998854 3566666666643
No 41
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=95.10 E-value=0.038 Score=31.86 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=42.8
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.|++.|...-||+.+.|+.+. +-..|..+..++.|+.+| |+.|-.. ++.++..-++.
T Consensus 6 ~v~l~r~~~g~G~~~~~~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 1g9o_A 6 LCCLEKGPNGYGFHLHGEKGK--LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRA 73 (91)
T ss_dssp EEEEECBTTBCCEEEEECTTC--SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCcccEEEEecCCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 467888888999999998763 345788999999999999 8877532 35555555554
No 42
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=95.08 E-value=0.013 Score=34.31 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=37.9
Q ss_pred EEEEec-cCCceeeEEecCCCCCC-----CCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKK-SRPLLGMAIEGGANTKH-----PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K-~~~~LGIAIEGGaNTRq-----PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.| ...-||+.|.||..... .-..|..|..++.|+.+|+|+.|-.
T Consensus 8 ~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~ 61 (98)
T 1ihj_A 8 MVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDR 61 (98)
T ss_dssp EEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCE
T ss_pred EEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 367777 67789999999876543 2356888999999999998988754
No 43
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=94.98 E-value=0.028 Score=34.26 Aligned_cols=61 Identities=16% Similarity=0.213 Sum_probs=45.2
Q ss_pred eEEEEeccCCc-eeeEEecCCCCCCCCceEEEEcCCCceecc-CCCCCceee-----------ehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPL-LGMAIEGGANTKHPLPRIINIHDKLKISSM-SQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~-LGIAIEGGaNTRqPLPRIitIq~gGsA~~c-gqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
..|++.|...- ||+.|.||.....| ..|..|..++.|+.+ |.|+.|-.. ++.++..-++.+
T Consensus 17 ~~v~l~k~~~~~~G~~l~gg~~~~~~-v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 17 VLIRMKPDENGRFGFNVKGGYDQKMP-VIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp EEEEECCCSSSCCSEEEEEEGGGTEE-EEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCcCEEEecccCCCCC-eEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 45888887655 99999999765444 478889999999999 889887543 456655555544
No 44
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=94.97 E-value=0.033 Score=32.49 Aligned_cols=60 Identities=17% Similarity=0.063 Sum_probs=45.5
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhcc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSSR 77 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~~ 77 (86)
.|++.|...-||+.+.++ ...+-..|..|..+|.|+.+|+|+.|-. .++.++..-++++.
T Consensus 7 ~v~l~k~~~~lG~~i~~~--~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 7 IIRLVKNREPLGATIKKD--EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp EEEEEESSSCCCEEEEEC--TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred EEEEEeCCCCccEEEEec--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 467778888999999987 2223357888999999999999998753 46777777776643
No 45
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=94.94 E-value=0.03 Score=34.75 Aligned_cols=60 Identities=22% Similarity=0.297 Sum_probs=43.9
Q ss_pred EEEEeccCCc-eeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 16 RITVKKSRPL-LGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~~-LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.|++.|...- ||+.+.||.... +-+.|..|..++.|+.+|+|+.|-- .++.|+..-++.+
T Consensus 27 ~V~l~~~~~~~lG~~l~~~~~~~-~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 98 (114)
T 2gzv_A 27 KVTLQKDAQNLIGISIGGGAQYC-PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 98 (114)
T ss_dssp EEEEECCTTSCCSEEEEECCC---CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred EEEEEECCCCcEeEEEEeCCCCC-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5667776654 999999988654 4578999999999999998888753 3566666666543
No 46
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=94.91 E-value=0.092 Score=31.30 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=45.9
Q ss_pred cccceEEEEeccC-CceeeEEecCCC-CCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 11 VQGQLRITVKKSR-PLLGMAIEGGAN-TKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 11 ~~Gnl~i~V~K~~-~~LGIAIEGGaN-TRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.+..-.|++.|.. .-||+.|.+..+ ...|-..|..|..++.|+.|+.|+.|-. .++.|+..-|+..
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3444567777765 679999975322 1223347889999999999999998753 3677777777653
No 47
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=94.90 E-value=0.02 Score=33.15 Aligned_cols=48 Identities=29% Similarity=0.365 Sum_probs=37.7
Q ss_pred eEEEEec-cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKK-SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K-~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
-.|++.| ...-||+.+.||.....+ ..|..+..++.|+.+|.|+.|-.
T Consensus 6 ~~v~l~k~~~~~lG~~i~~~~~~~~g-~~V~~V~~~spA~~aggl~~GD~ 54 (90)
T 1qav_A 6 RRVTVRKADAGGLGISIKGGRENKMP-ILISKIFKGLAADQTEALFVGDA 54 (90)
T ss_dssp EEEEEECCTTTCCCEEEEEEGGGTEE-EEEEEECTTSHHHHTTCCCTTEE
T ss_pred EEEEEEeCCCCCcCEEEEcccCCCCC-EEEEEECCCCHHHhcCCCCCCCE
Confidence 3577777 457899999998765433 47889999999999999998764
No 48
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=94.90 E-value=0.012 Score=36.82 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=49.5
Q ss_pred ccccc-eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 10 EVQGQ-LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 10 d~~Gn-l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
+.+|. +.|++.|...-+|+.+.||..... -..|..|..+|.|+.+|+|+.|-.. ++.|+..-|+.+
T Consensus 14 ~~~g~~~~v~l~~~~~g~G~~i~g~~~~~~-~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 14 ELKGKFIHTKLRKSSRGFGFTVVGGDEPDE-FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp TSCSEEEEEEEEECSSCCSEEEEEEEETTE-EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred hcCCcEEEEEEEECCCcccEEEeCccCCCC-CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34444 568889988899999999876433 2478899999999999999887532 466776666654
No 49
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=94.88 E-value=0.029 Score=34.58 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=45.2
Q ss_pred ceEEEE-eccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 14 QLRITV-KKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V-~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
...|.+ ++...-||+.+.||.+... .-..|..|..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 16 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 16 TYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred EEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345666 5577889999999876543 33567889999999999999887543 35666665554
No 50
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=94.82 E-value=0.054 Score=32.21 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=40.7
Q ss_pred cceEEEE--eccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCceee
Q psy17151 13 GQLRITV--KKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 13 Gnl~i~V--~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
-.+.|++ ++...-||+.+.||....+ +-..|..|..++.|+.+|+|+.|-..
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I 69 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKI 69 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEE
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEE
Confidence 3566777 6778889999999876532 24568899999999999989987643
No 51
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=94.80 E-value=0.039 Score=33.99 Aligned_cols=59 Identities=22% Similarity=0.309 Sum_probs=43.0
Q ss_pred EEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 17 ITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
|++.|. ..-||+.|.||..... -..|..+..|+.|+.+|+|+.|-.. ++.++..-++.+
T Consensus 23 v~l~k~~~~~lG~~i~gg~~~~~-~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 93 (125)
T 3hpk_A 23 VTLQKDAQNLIGISIGGGAQYCP-CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 93 (125)
T ss_dssp EEEECCTTSCCCEEEEECSSCCS-SEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred EEEEeCCCCCcCEEEeccCCCCC-CEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445553 4579999999987543 3478899999999999999987532 566666666653
No 52
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=94.80 E-value=0.015 Score=35.76 Aligned_cols=61 Identities=23% Similarity=0.265 Sum_probs=44.0
Q ss_pred eEEEEeccC-------CceeeEEecCCCCC----CCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhh
Q psy17151 15 LRITVKKSR-------PLLGMAIEGGANTK----HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSD 72 (86)
Q Consensus 15 l~i~V~K~~-------~~LGIAIEGGaNTR----qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~ 72 (86)
.+|++.+.. .-||+.|.||..+. .+-..|..|..++.|+.+|+|+.|-.. ++.|+..-
T Consensus 14 ~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 93 (117)
T 1ujd_A 14 ARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSI 93 (117)
T ss_dssp EEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 356666665 67999999997542 123567899999999999999987643 45666655
Q ss_pred hhh
Q psy17151 73 IRS 75 (86)
Q Consensus 73 ~~~ 75 (86)
++.
T Consensus 94 l~~ 96 (117)
T 1ujd_A 94 ISQ 96 (117)
T ss_dssp HSC
T ss_pred Hhc
Confidence 554
No 53
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=94.79 E-value=0.018 Score=34.71 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=38.3
Q ss_pred ceEEEEeccCCceeeEEec---CCCCC--CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEG---GANTK--HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEG---GaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|++.|...-||+.+.| |.... .+-..|..+..+|.|+.+|+|+.|-.
T Consensus 5 ~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~ 59 (113)
T 2g5m_B 5 LFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDL 59 (113)
T ss_dssp EEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCB
T ss_pred EEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 3567888888899999999 54332 23346778999999999999998753
No 54
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.78 E-value=0.036 Score=32.77 Aligned_cols=54 Identities=7% Similarity=0.186 Sum_probs=42.4
Q ss_pred ccccceEEEEeccCCceeeEEecCCCCC-CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 10 EVQGQLRITVKKSRPLLGMAIEGGANTK-HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 10 d~~Gnl~i~V~K~~~~LGIAIEGGaNTR-qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.......|++.+...-||+.+.+|.... ..-..|..|..++.|+.+|.|+.|-.
T Consensus 8 ~~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~ 62 (104)
T 2djt_A 8 QASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDL 62 (104)
T ss_dssp SCCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCB
T ss_pred CCCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 3445678888888889999999987652 23357889999999999998887643
No 55
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=94.76 E-value=0.054 Score=32.45 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=37.6
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|...-||+.|.|+... -..|..|..++.|+.+|+|+.|-.
T Consensus 17 ~~v~l~~~~~~lG~~l~~~~~~---g~~V~~V~~~spA~~aG~l~~GD~ 62 (111)
T 2dlu_A 17 EEVELINDGSGLGFGIVGGKTS---GVVVRTIVPGGLADRDGRLQTGDH 62 (111)
T ss_dssp EEEEEECCSSCCCEEEECCSSS---SBEEEEECTTSSHHHHTCCCSSCE
T ss_pred EEEEEEeCCCccCEEEeccCCC---CEEEEEECCCCHHHHcCCCCCCCE
Confidence 4577778888899999988642 367889999999999999988763
No 56
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=94.72 E-value=0.048 Score=32.59 Aligned_cols=59 Identities=15% Similarity=0.166 Sum_probs=44.2
Q ss_pred eEEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 15 LRITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
-.|++.|.. .-||+.+.+|.....+ ..|..+..++.|+.+| |+.|-.. ++.|+..-++.
T Consensus 17 ~~v~l~k~~~~~lG~~~~~~~~~~~g-~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 17 RIVTLKKPPGAQLGFNIRGGKASQLG-IFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT 87 (104)
T ss_dssp EEEEECCCTTCCCSEEEECCSSSCCC-CEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEeCCCCCccEEEEcccCCCCC-EEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 357777876 7899999998765443 5788999999999998 8887543 35666655554
No 57
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=94.64 E-value=0.041 Score=32.26 Aligned_cols=48 Identities=19% Similarity=0.111 Sum_probs=38.5
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
--.|++.|...-||+.+.||... +-..|..+..++.|+.+|.|+.|-.
T Consensus 12 ~~~v~l~k~~~glG~~~~~~~~~--~gv~V~~V~~~spA~~aG~l~~GD~ 59 (104)
T 3i4w_A 12 PRRIVIHRGSTGLGFNIVGGEXG--EGIFISFILAGGPADLSGELRKGDQ 59 (104)
T ss_dssp CEEEEEECBTTBTSEEEEECC-C--CCEEEEEECTTSHHHHHCCCCTTEE
T ss_pred cEEEEEEeCCCccCEEEECCCCC--CCEEEEEECCCChHHhcCCCCCCCE
Confidence 45688888888899999998652 3356788999999999999988764
No 58
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=94.60 E-value=0.02 Score=34.50 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=43.2
Q ss_pred EEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 16 RITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.|++.|.. .-||+.|.||.....| ..|..|..++.|+.|+.|+.|-. .++.|...-++.+
T Consensus 12 ~v~l~~~~~~~lG~~l~~g~~~~~~-~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 12 KVLLLKEDHEGLGISITGGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp EEEEECCSSSCCCEEEEEEGGGTEE-EEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred EEEEEeCCCCccCEEEEeccCCCCC-EEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45665544 6899999999765444 37889999999999988988753 3456665555543
No 59
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=94.50 E-value=0.058 Score=32.29 Aligned_cols=51 Identities=16% Similarity=0.230 Sum_probs=40.0
Q ss_pred cceEEEEeccCCceeeEEecCCCCC-----CCCceEEEEcCCCceeccCCCCCceee
Q psy17151 13 GQLRITVKKSRPLLGMAIEGGANTK-----HPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEGGaNTR-----qPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
-.+.+.+.+...-||+.|.||...+ ..-..|..+..++.|+.+| |+.|-..
T Consensus 15 ~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I 70 (110)
T 1x5q_A 15 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKL 70 (110)
T ss_dssp EEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEE
T ss_pred ceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEE
Confidence 3567888888899999999998753 1224678899999999998 8887543
No 60
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=94.49 E-value=0.024 Score=34.54 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=44.8
Q ss_pred eEEEEec-cCCceeeEEecCCCCC-CCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 15 LRITVKK-SRPLLGMAIEGGANTK-HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K-~~~~LGIAIEGGaNTR-qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
..|++.| ...-||+.|.||.... .+-..|..|..++.|+.+|+|+.|-.. ++.|+..-|+.+
T Consensus 7 ~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 7 ITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp EEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 4566665 3466999999997643 233467889999999999999987543 466666666654
No 61
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=94.46 E-value=0.024 Score=32.46 Aligned_cols=47 Identities=21% Similarity=0.272 Sum_probs=36.4
Q ss_pred EEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|. ..-||+.+.||.....| ..|..+..++.|+.++.|+.|-.
T Consensus 5 ~v~l~~~~~~~lG~~i~~~~~~~~~-~~V~~V~~gspA~~~agl~~GD~ 52 (87)
T 4e34_A 5 KVLLLKEDHEGLGISITGGKEHGVP-ILISEIHPGQPADRCGGLHVGDA 52 (87)
T ss_dssp EEEEECCTTBCCCEEEEEEGGGTEE-EEEEEECTTSHHHHHSCCCTTEE
T ss_pred EEEEEECCCCcccEEEEccCCCCCC-EEEEEECCCCHHHhcCCCCCCCE
Confidence 3666665 44899999999766544 47778999999999888988753
No 62
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=94.42 E-value=0.027 Score=32.31 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=35.8
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|+++ ...-+|+.+.||.....|+ .|..+..++.|+.+| |+.|-.
T Consensus 4 ~~~v~l~-~~~~~G~~l~~g~~~~~~~-~V~~V~~~spA~~aG-l~~GD~ 50 (88)
T 2uzc_A 4 NYSVSLV-GPAPWGFRLQGGKDFNMPL-TISSLKDGGKAAQAN-VRIGDV 50 (88)
T ss_dssp EEEEEEE-SSSCCCEEEEEEGGGTEEE-EEEEECTTSHHHHTT-CCTTCE
T ss_pred EEEEEEc-CCCcccEEEECcCCCCCCe-EEEEECCCChHHHcC-CCCCCE
Confidence 3566674 4456999999998765543 788899999999998 887653
No 63
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=94.34 E-value=0.063 Score=30.40 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=35.1
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+.|++++. .-||+.+.||.....| ..|..+..++.|+.+| |+.|-.
T Consensus 3 ~~v~l~~~-~~~G~~l~gg~~~~~~-v~V~~V~~~spA~~aG-l~~GD~ 48 (85)
T 1rgw_A 3 YSVTLTGP-GPWGFRLQGGKDFNMP-LTISRITPGSKAAQSQ-LSQGDL 48 (85)
T ss_dssp EEEEECCS-SCCCEEECCCGGGTSC-CBEEEECTTSHHHHSS-CCCCSB
T ss_pred EEEEEeCC-CccCEEEEeccCCCCC-eEEEEECCCCHHHHcC-CCCCCE
Confidence 45666544 5699999999887666 3788999999999875 777643
No 64
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=94.26 E-value=0.096 Score=30.73 Aligned_cols=57 Identities=12% Similarity=0.124 Sum_probs=43.8
Q ss_pred EEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 17 ITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
|.+.|.. .-||+.|.++.+ .-+.|..+.+++.|+.|+.|+.|-.. ++.|+.+-++++
T Consensus 5 V~l~K~~~~~lG~~i~~~~~---~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 73 (88)
T 1kwa_A 5 VQFQKNTDEPMGITLKMNEL---NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM 73 (88)
T ss_dssp EEEEECSSSCCCEEEECSCG---GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC
T ss_pred EEEEeCCCCceeEEEEeCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 5666774 779999998532 23678899999999999999988643 677777777665
No 65
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=94.24 E-value=0.023 Score=35.36 Aligned_cols=67 Identities=18% Similarity=0.173 Sum_probs=47.9
Q ss_pred eccccceEEEEeccCCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 9 SEVQGQLRITVKKSRPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 9 ~d~~Gnl~i~V~K~~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
++...--.|++.|...-||+.|.||....+ .-..|..|.++|.|+.+|+|+.|--. ++.++..-++.
T Consensus 21 ~~~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 100 (117)
T 2fne_A 21 QSMPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKR 100 (117)
T ss_dssp --CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cCCCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 333344568888998999999999875422 23567899999999999999987543 45666666654
No 66
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=94.22 E-value=0.018 Score=34.71 Aligned_cols=50 Identities=20% Similarity=0.237 Sum_probs=40.6
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|...-||+.+.||......-..|..|..++.|+.+|+|+.|-.
T Consensus 18 ~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 67 (116)
T 2dm8_A 18 EMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQ 67 (116)
T ss_dssp CEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCE
T ss_pred EEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCE
Confidence 46788888888899999998876544456778999999999998988754
No 67
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=94.20 E-value=0.045 Score=32.75 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=37.2
Q ss_pred ceEEEEeccCCceeeEEec-CCCCCCC----CceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEG-GANTKHP----LPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEG-GaNTRqP----LPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|.+.|...-||+.|.| |.+...+ --.|..|..++.|+.+|+|+.|-.
T Consensus 10 ~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 64 (107)
T 1wf8_A 10 LFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQ 64 (107)
T ss_dssp EEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCB
T ss_pred EEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCE
Confidence 3557788888899999999 2333222 235678999999999999998753
No 68
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=94.17 E-value=0.044 Score=33.22 Aligned_cols=49 Identities=18% Similarity=0.132 Sum_probs=39.2
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
...|++.|...-||+.+.|+... +-..|..+..++.|+.+|+|+.|-..
T Consensus 15 ~~~v~l~k~~~glG~~l~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~I 63 (119)
T 1tp5_A 15 PRRIVIHRGSTGLGFNIVGGEDG--EGIFISFILAGGPADLSGELRKGDQI 63 (119)
T ss_dssp CEEEEEECTTSCCCEEEEECGGG--CCEEEEEECTTSHHHHHSCCCTTEEE
T ss_pred cEEEEEEECCCCccEEEecCCCC--CCEEEEEECCCCHHHHcCCCCCCCEE
Confidence 44678888888899999998652 34578899999999999989887643
No 69
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=94.11 E-value=0.073 Score=30.66 Aligned_cols=58 Identities=10% Similarity=0.149 Sum_probs=43.2
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.|++.|...-+|+.+.|+.. .+-..|..+..++.|+.+| |+.|-- +++.++..-++.+
T Consensus 7 ~v~l~k~~~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2he4_A 7 LCHLRKGPQGYGFNLHSDKS--RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 75 (90)
T ss_dssp EEEEECBTTBCCEEEEECSS--SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred EEEEEECCCCccEEEEccCC--CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46788888889999999876 3346788899999999998 887753 2336666655543
No 70
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=94.03 E-value=0.063 Score=36.12 Aligned_cols=51 Identities=16% Similarity=0.133 Sum_probs=38.9
Q ss_pred cceEEEEeccCCceeeEEec---CCCCC--CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 13 GQLRITVKKSRPLLGMAIEG---GANTK--HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEG---GaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
-.+.|++.|...-||+.|.| |..+. ..--.|..|..||.|..+|+|++|-.
T Consensus 80 ~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~ 135 (170)
T 3egg_C 80 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDL 135 (170)
T ss_dssp EEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCE
T ss_pred eEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCE
Confidence 35678888888899999999 44332 12235778999999999999998754
No 71
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=93.90 E-value=0.024 Score=33.72 Aligned_cols=47 Identities=17% Similarity=0.093 Sum_probs=37.9
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|...-||+.+.|+.. .+-..|..+..++.|+.+|+|+.|-.
T Consensus 17 ~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~ 63 (113)
T 1um7_A 17 RKIILHKGSTGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDR 63 (113)
T ss_dssp EEEEEECCSSCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCE
T ss_pred EEEEEEECCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 457888888889999999875 33456888999999999998988753
No 72
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=93.87 E-value=0.036 Score=34.29 Aligned_cols=61 Identities=5% Similarity=0.005 Sum_probs=44.2
Q ss_pred eEEEEeccC-CceeeEEecCCCCCCC--CceEEEEcCCCceeccCCCCCce------------eeehhhhhhhhhh
Q psy17151 15 LRITVKKSR-PLLGMAIEGGANTKHP--LPRIINIHDKLKISSMSQIPTPY------------HFTYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~~-~~LGIAIEGGaNTRqP--LPRIitIq~gGsA~~cgqLkv~~------------~~~~~~~~~~~~~ 75 (86)
..|++.|.. .-||+.|.||..+... -..|..|..+|.|+.+|+|+.|- ..++.++..-++.
T Consensus 27 ~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 27 EYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp EEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred EEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 356777776 5899999999876532 23567889999999999998763 3356666666654
No 73
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=93.87 E-value=0.042 Score=31.63 Aligned_cols=46 Identities=13% Similarity=0.267 Sum_probs=35.1
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
++|+.++. .-||+.+.||.....| ..|..+..++.|+.+| |+.|-.
T Consensus 5 ~~v~~~~~-~~~G~~l~gg~~~~~~-v~V~~V~~~spA~~aG-l~~GD~ 50 (89)
T 2q3g_A 5 FKVVLEGP-APWGFRLQGGKDFNVP-LSISRLTPGGKAAQAG-VAVGDW 50 (89)
T ss_dssp EEEEEESS-SCCCEEEEEEGGGTEE-EEEEEECTTSHHHHTT-CCTTCE
T ss_pred EEEEEcCC-CcccEEEECcCCCCCC-EEEEEECCCCHHHHcC-CCCCCE
Confidence 45666654 5699999999875444 3678899999999998 888753
No 74
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=93.74 E-value=0.11 Score=30.96 Aligned_cols=63 Identities=22% Similarity=0.145 Sum_probs=46.8
Q ss_pred cceEEEEeccCCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 13 GQLRITVKKSRPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
-.+.+++.+...-||+.+.++.+... .-..|..|..++.|+.+|+|+.|-. +++.++..-++.
T Consensus 11 ~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (111)
T 2koj_A 11 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRS 86 (111)
T ss_dssp EEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred cEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35677888888899999999865421 2357889999999999998988754 345666666654
No 75
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=93.65 E-value=0.15 Score=31.41 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=44.5
Q ss_pred eEEEEecc-CCceeeEEecCCC---CCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKS-RPLLGMAIEGGAN---TKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~-~~~LGIAIEGGaN---TRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
..|++.|. ..-||+.|.|+.. ....-..|..|..++.|+.+|+|+.+-. .++.|+..-++..
T Consensus 17 ~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 17 TEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34666676 3789999999831 1223367889999999999998988753 3367777766654
No 76
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=93.47 E-value=0.046 Score=34.62 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=42.4
Q ss_pred CCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhcc
Q psy17151 23 RPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSSR 77 (86)
Q Consensus 23 ~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~~ 77 (86)
..-||+.|.||..... +-..|..|..+|.|+.+|+|+.|-. .++.|+..-|+.++
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 114 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESK 114 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTS
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 5579999999876642 3346889999999999999998764 35677777777654
No 77
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=93.41 E-value=0.14 Score=31.71 Aligned_cols=63 Identities=22% Similarity=0.151 Sum_probs=46.2
Q ss_pred cceEEEEeccCCceeeEEecCCCCC--CCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 13 GQLRITVKKSRPLLGMAIEGGANTK--HPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEGGaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
-.+.|.+.+....||+.|.++.... ..-..|..|..++.|..+|+|+.|-- +++.|+..-++.
T Consensus 30 ~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 105 (121)
T 2kom_A 30 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRS 105 (121)
T ss_dssp EEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHH
T ss_pred eEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 3466778888888999999987542 12357889999999999998988754 335666655554
No 78
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=93.38 E-value=0.25 Score=29.86 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=42.2
Q ss_pred EEEEec-cCCceeeEEecCCCCCC-C-----CceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 16 RITVKK-SRPLLGMAIEGGANTKH-P-----LPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K-~~~~LGIAIEGGaNTRq-P-----LPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.|.+.| ...-||+.|.||.+..+ . -+.|..|..++.|+.|+.|+.|-.. ++.|+..-|+.
T Consensus 13 ~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 90 (114)
T 1uew_A 13 DVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 90 (114)
T ss_dssp EEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 355555 45679999999865432 1 2488899999999998999988643 35666666654
No 79
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.26 E-value=0.056 Score=31.65 Aligned_cols=46 Identities=20% Similarity=0.291 Sum_probs=35.8
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++++. .-+|+.+.||.....|+ .|..+.+++.|+.+| |+.|-.
T Consensus 10 ~~v~l~~~-~~~G~~l~gg~~~~~~v-~V~~V~~~spA~~aG-l~~GD~ 55 (94)
T 2eeg_A 10 HSVTLRGP-SPWGFRLVGGRDFSAPL-TISRVHAGSKAALAA-LCPGDL 55 (94)
T ss_dssp EEEEECCS-SCCSCCEECCTTTTSCC-EECCCCSSSHHHHTT-CCTTCE
T ss_pred EEEEEeCC-CccCEEEECccCCCCCE-EEEEECCCCHHHHcC-CCCCCE
Confidence 45666555 46999999998876664 778899999999998 887754
No 80
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=93.20 E-value=0.067 Score=31.80 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=36.6
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|++ |...-||+.|.||..... +-..|..|..++.|+.+|.|+.|-.
T Consensus 12 ~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~ 62 (106)
T 3axa_A 12 IITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQ 62 (106)
T ss_dssp EEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCE
T ss_pred EEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCE
Confidence 455666 667779999999765432 2345778999999999999988753
No 81
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=92.87 E-value=0.25 Score=29.64 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=32.8
Q ss_pred eccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 20 KKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 20 ~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
++...-||+.+.+|.....+ ..|..+..++.|+.+| |+.|-.
T Consensus 23 ~~~~~~lG~~l~~~~~~~~g-v~V~~V~~~s~A~~aG-L~~GD~ 64 (114)
T 1x5n_A 23 LVGSRGLGCSISSGPIQKPG-IFISHVKPGSLSAEVG-LEIGDQ 64 (114)
T ss_dssp CCSSCCCCEEEEECCSSSCS-EEEEEECTTSTTTTTT-CCTTCE
T ss_pred EcCCCceeEEEeecCCCCCC-EEEEEECCCCHHHHcC-CCCCCE
Confidence 44556799999999765544 6788999999999998 887753
No 82
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=92.84 E-value=0.071 Score=30.77 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=42.7
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.|++.|...-+|+.+.++.+.. -..|..+..++.|+.+| |+.|-.. ++.++..-++.
T Consensus 8 ~v~l~~~~~~~G~~l~~~~~~~--~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (95)
T 3r68_A 8 VVVIKKGSNGYGFYLRAGPEQK--GQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK 75 (95)
T ss_dssp EEEEECBTTBCSCEEEEC--CC--SEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEecCCCcccEEEEecCCCC--CEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4778888889999999887762 35677899999999999 9988643 44666666665
No 83
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=92.77 E-value=0.14 Score=30.03 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=41.5
Q ss_pred EEEEeccC-CceeeEEecCCCCCC--------CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSR-PLLGMAIEGGANTKH--------PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~-~~LGIAIEGGaNTRq--------PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|.+.|.. +.||+.+.|+..... .-..|..+..++.|+.+|.|+.|-. +++.|+..-++.
T Consensus 7 ~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (103)
T 2fcf_A 7 RVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 86 (103)
T ss_dssp EEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35566654 689999999765322 1256778999999999998888753 346677666655
Q ss_pred c
Q psy17151 76 S 76 (86)
Q Consensus 76 ~ 76 (86)
+
T Consensus 87 ~ 87 (103)
T 2fcf_A 87 A 87 (103)
T ss_dssp C
T ss_pred C
Confidence 4
No 84
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=92.60 E-value=0.17 Score=32.87 Aligned_cols=63 Identities=14% Similarity=0.192 Sum_probs=46.5
Q ss_pred ceEEEEeccC-CceeeEEecCCCC---CCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 14 QLRITVKKSR-PLLGMAIEGGANT---KHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 14 nl~i~V~K~~-~~LGIAIEGGaNT---RqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
...|++.|.. .-||+.+.||... ..+-+.|..+..++.|+.+|+|+.|-.. ++.++..-++..
T Consensus 7 ~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 7 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp EEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred EEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3567777764 7899999999643 2344678899999999999999887532 467777666654
No 85
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=92.43 E-value=0.065 Score=33.45 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=44.8
Q ss_pred eeccccceEEEEeccCC-ceeeEEecCCCCC--CCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhh
Q psy17151 8 ISEVQGQLRITVKKSRP-LLGMAIEGGANTK--HPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDI 73 (86)
Q Consensus 8 v~d~~Gnl~i~V~K~~~-~LGIAIEGGaNTR--qPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~ 73 (86)
.+...+-..|++.|... -||+.|.||...- ..-..|..|..+|.|..+|.|+.|-. +++.+...-+
T Consensus 19 ~s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 19 YFQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ------CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34445566788888874 8999999987632 11245778999999999999998853 3566666666
Q ss_pred hhc
Q psy17151 74 RSS 76 (86)
Q Consensus 74 ~~~ 76 (86)
+.+
T Consensus 99 ~~~ 101 (120)
T 2iwo_A 99 KNA 101 (120)
T ss_dssp HHC
T ss_pred HcC
Confidence 654
No 86
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=92.39 E-value=0.34 Score=28.04 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=32.8
Q ss_pred eEEEEeccCCceeeEEecCCCC-CCC------CceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANT-KHP------LPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNT-RqP------LPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+.|++.|.. -||+.|.||.+. ..| -..|..+..++.|+. .|+.|-.
T Consensus 5 ~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~ 57 (95)
T 1mfg_A 5 IRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDK 57 (95)
T ss_dssp EEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT--TCCTTCE
T ss_pred EEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh--CCCCCCE
Confidence 345556655 699999999863 122 245778999999998 7887753
No 87
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=92.07 E-value=0.12 Score=31.30 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=32.9
Q ss_pred EEeccCCceeeEEecCCCCCCC----CceEEEEcCCCceeccCCCCCcee
Q psy17151 18 TVKKSRPLLGMAIEGGANTKHP----LPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 18 ~V~K~~~~LGIAIEGGaNTRqP----LPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.......-+|+.|.||.....- --.|..|..++.|..+|.|+.|-.
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~ 56 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDK 56 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCE
Confidence 3445566799999999987541 135778999999999999998754
No 88
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=91.93 E-value=0.21 Score=28.93 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=40.4
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|++.|...-+|+.+.++. | ..|..+..++.|+.+| |+.|-. +++.++..-++.
T Consensus 6 ~v~l~~~~~g~G~~l~~~~----~-~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 70 (91)
T 2f5y_A 6 QITIPRGKDGFGFTICCDS----P-VRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS 70 (91)
T ss_dssp EEEEECBTTBTSEEEECSS----S-CEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCccEEEecCC----C-EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4677888888999998753 3 6788999999999998 888753 345666655554
No 89
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=91.79 E-value=0.037 Score=33.47 Aligned_cols=62 Identities=11% Similarity=0.021 Sum_probs=43.9
Q ss_pred ceEEEEecc-CCceeeEEecCCCCCC--CCceEEEEcCCCceeccCCCCCce------------eeehhhhhhhhhh
Q psy17151 14 QLRITVKKS-RPLLGMAIEGGANTKH--PLPRIINIHDKLKISSMSQIPTPY------------HFTYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V~K~-~~~LGIAIEGGaNTRq--PLPRIitIq~gGsA~~cgqLkv~~------------~~~~~~~~~~~~~ 75 (86)
-..|++.|. ..-||+.+.||..... +-..|..|..+|.|+.+|+|+.|- ..++.++..-++.
T Consensus 21 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 21 VEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp EEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred EEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 345777776 4679999999875432 224566789999999999888764 3356676666654
No 90
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=91.64 E-value=0.057 Score=33.70 Aligned_cols=64 Identities=14% Similarity=0.111 Sum_probs=45.2
Q ss_pred ccceEEEEecc--CCceeeEEecCCCCC--------CCCceEEEEcCCCceeccCCCCCcee-----------eehhhhh
Q psy17151 12 QGQLRITVKKS--RPLLGMAIEGGANTK--------HPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELK 70 (86)
Q Consensus 12 ~Gnl~i~V~K~--~~~LGIAIEGGaNTR--------qPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~ 70 (86)
+.--.|++.|. ..-||+.|.||.... .+--.|..|..+|.|+.+|.|+.|-. .++.++.
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 33445788887 357999999986421 12345778999999999999988753 3566666
Q ss_pred hhhhh
Q psy17151 71 SDIRS 75 (86)
Q Consensus 71 ~~~~~ 75 (86)
.-|+.
T Consensus 108 ~~l~~ 112 (128)
T 1nf3_C 108 DMMIA 112 (128)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 66653
No 91
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=91.63 E-value=0.23 Score=39.51 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=42.0
Q ss_pred ceEEEEeccCCceeeEEecCCCCC----CCCceEEEEcCCCceeccCCCCCceee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTK----HPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTR----qPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
...|.+.|...-||+.|.||..+. .+-..|..|..||.|..+|+|++|-..
T Consensus 60 ~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~I 114 (721)
T 2xkx_A 60 YEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSI 114 (721)
T ss_pred EEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEE
Confidence 356888888899999999998763 344578899999999999999998653
No 92
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=91.59 E-value=0.055 Score=33.97 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=41.1
Q ss_pred ccCCceeeEEecCCCCCC---CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 21 KSRPLLGMAIEGGANTKH---PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 21 K~~~~LGIAIEGGaNTRq---PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
+...-||+.|.||..... .-..|..|..+|.|+.+|+|++|-. .++.|+..-|+.+
T Consensus 34 ~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 34 SGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp STTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 667789999999875521 1246788999999999999998764 3455666666643
No 93
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=91.58 E-value=0.19 Score=29.43 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=40.9
Q ss_pred EEEEeccC-CceeeEEec-CCC-----CCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 16 RITVKKSR-PLLGMAIEG-GAN-----TKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~-~~LGIAIEG-GaN-----TRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.|++.|.. .-||+.|.| |.. ...+-..|..+..++.|+.+| |+.|-. +++.|+..-++++
T Consensus 7 ~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 84 (96)
T 2ego_A 7 VLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKAS 84 (96)
T ss_dssp EEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred EEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 46677766 489999998 322 122335788899999999999 888753 3356776666554
No 94
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=91.56 E-value=0.025 Score=33.18 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=39.3
Q ss_pred ccceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 12 QGQLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 12 ~Gnl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
--.+.+++.+...-||+.+.||.....+ ..|..+..++.|+.+|+|+.|-.
T Consensus 10 ~~~~~v~l~~~~~g~G~~~~~~~~~~~~-~~V~~V~~~spA~~aG~l~~GD~ 60 (103)
T 1wfv_A 10 FDYFTVDMEKGAKGFGFSIRGGREYKMD-LYVLRLAEDGPAIRNGRMRVGDQ 60 (103)
T ss_dssp SCCEECCEECCTTSSSBCCEEETTTTEE-EECCCBCTTSHHHHHCSSCTTCE
T ss_pred ceEEEEEEecCCCcCCEEEeccccCCCC-EEEEEECCCChHHHcCCCCCCCE
Confidence 3446777877777799999998765433 45678899999999998988754
No 95
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=91.40 E-value=0.59 Score=27.52 Aligned_cols=48 Identities=17% Similarity=0.202 Sum_probs=36.2
Q ss_pred eEEEEeccC-CceeeEEecCCCCC-----CCCceEEEEcCCCceeccCCCCCceee
Q psy17151 15 LRITVKKSR-PLLGMAIEGGANTK-----HPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 15 l~i~V~K~~-~~LGIAIEGGaNTR-----qPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
..|++.|.. .-||+.|.||.... ..-..|..+..++.|+ +.|+.|-..
T Consensus 9 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~--agl~~GD~I 62 (107)
T 2h2b_A 9 HTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE--GQLQENDRV 62 (107)
T ss_dssp EEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB--TTBCTTCEE
T ss_pred EEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh--hCCCCCCEE
Confidence 568888885 68999999987642 2235678899999998 688887643
No 96
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=91.31 E-value=0.068 Score=38.93 Aligned_cols=61 Identities=26% Similarity=0.322 Sum_probs=45.7
Q ss_pred eEEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 15 LRITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
-.|++.|.. .-||+.|.||.....| ..|..|..||.|+.|+.|++|-. +++.|...-|+.+
T Consensus 79 r~V~L~k~~~~glGf~I~gg~d~~~g-i~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~ 151 (263)
T 1z87_A 79 RRVTVRKADAGGLGISIKGGRENKMP-ILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 151 (263)
T ss_dssp EEECCCTTTTCCCCCEEEEETTTTEE-EEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC
T ss_pred EEEEEEeCCCCCEeEEEeeccCCCCC-EEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 457777763 7899999999865544 56788999999999999998863 3456666555553
No 97
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=91.04 E-value=0.47 Score=30.03 Aligned_cols=59 Identities=14% Similarity=0.206 Sum_probs=41.1
Q ss_pred EEEEec-cCCceeeEEecCCCCCC----------C-CceEEEEcCCCceeccCCCCCceee-----------ehhhhhhh
Q psy17151 16 RITVKK-SRPLLGMAIEGGANTKH----------P-LPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSD 72 (86)
Q Consensus 16 ~i~V~K-~~~~LGIAIEGGaNTRq----------P-LPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~ 72 (86)
.|++.| ...-||+.|.||..... | --.|..|..++.|..+| |+.|-.. ++.++..-
T Consensus 30 ~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~ 108 (132)
T 3l4f_D 30 TVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNM 108 (132)
T ss_dssp EEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHH
T ss_pred EEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 455555 45679999999976321 1 13677899999999999 9987532 45666655
Q ss_pred hhh
Q psy17151 73 IRS 75 (86)
Q Consensus 73 ~~~ 75 (86)
|+.
T Consensus 109 l~~ 111 (132)
T 3l4f_D 109 IRQ 111 (132)
T ss_dssp HHH
T ss_pred HHc
Confidence 554
No 98
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=90.92 E-value=0.1 Score=30.16 Aligned_cols=58 Identities=12% Similarity=0.065 Sum_probs=43.0
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.|++.|...-||+.+.++.+.. -..|..+..++.|+.+| |+.|-.. ++.|+..-++.+
T Consensus 6 ~v~l~k~~~~~G~~l~~~~~~~--g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2vsp_A 6 LCRLAKGENGYGFHLNAIRGLP--GSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS 74 (91)
T ss_dssp EEEEECBTTBTSCCCBCCTTCS--CCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred EEEEEeCCCcccEEEEeccCCC--CeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3677888888999998876543 34888999999999999 8877533 577777766653
No 99
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=90.89 E-value=0.19 Score=28.70 Aligned_cols=59 Identities=22% Similarity=0.297 Sum_probs=41.4
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
++|+.+. ..-||+.+.||...+.+ +.|..+..++.|+.+| |+.|--. ++.++..-++.+
T Consensus 4 ~~v~~~~-~~~lG~~l~~~~~~~~g-~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (87)
T 2pa1_A 4 LTVDVAG-PAPWGFRITGGRDFHTP-IMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQS 73 (87)
T ss_dssp EEEEECS-SSCCSEEEEEEGGGTEE-EEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTC
T ss_pred EEEEECC-CCccCEEEecccCCCCC-EEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3455543 45699999999876443 5788999999999876 7776432 356666666554
No 100
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=90.86 E-value=0.59 Score=27.19 Aligned_cols=42 Identities=7% Similarity=0.153 Sum_probs=33.9
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|...-||+.+.+.. -..|..+..++.|+.+| |+.|-.
T Consensus 11 ~v~l~~~~~~~G~~l~~~~-----g~~V~~V~~~spA~~aG-L~~GD~ 52 (93)
T 2dls_A 11 CVIIQKDQHGFGFTVSGDR-----IVLVQSVRPGGAAMKAG-VKEGDR 52 (93)
T ss_dssp EEEEECSSSSCCEEEECSS-----SCEEEEECSSSTTTTTT-CCSSCE
T ss_pred EEEEEeCCCceeEEEeCCC-----CEEEEEECCCCHHHHcC-CCCCCE
Confidence 3777888888999998742 25788899999999998 888754
No 101
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=90.84 E-value=0.38 Score=31.13 Aligned_cols=50 Identities=22% Similarity=0.356 Sum_probs=38.2
Q ss_pred cceEEEE-eccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 13 GQLRITV-KKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 13 Gnl~i~V-~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
|.-.+.+ ++...-||+.|.||..... -+.|..+..++.|+.++.|+.|-.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~-~~~V~~v~~~spA~~aggl~~GD~ 57 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDG-KPRVSNLRQGGIAARSDQLDVGDY 57 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSS-CSEEEEECTTSHHHHTTSCCTTCE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCC-CeEEEEECCCChHHhcCCCCCCCE
Confidence 3334444 4566789999999987543 368999999999999989998754
No 102
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=90.70 E-value=0.075 Score=31.56 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=34.8
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
++|++... .-||+.+.||.....| ..|..+..++.|+.+| |+.|-.
T Consensus 7 ~~v~l~~~-~~~G~~l~gg~~~~~~-v~V~~V~~~spA~~aG-L~~GD~ 52 (103)
T 1wf7_A 7 GSVSLVGP-APWGFRLQGGKDFNMP-LTISSLKDGGKASQAH-VRIGDV 52 (103)
T ss_dssp EEEEEESS-SCCSCCEEEETTTTEE-EEECCCCTTCHHHHTT-CCTTCB
T ss_pred EEEEEeCC-CccCEEEeccccCCCC-EEEEEECCCCHHHHcC-CCCCCE
Confidence 45555543 5599999999886655 3677889999999998 887653
No 103
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=90.60 E-value=0.22 Score=29.22 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=29.7
Q ss_pred ceeeEEecCCCCC---CCC--------ceEEEEcCCCceeccCCCCCcee
Q psy17151 25 LLGMAIEGGANTK---HPL--------PRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 25 ~LGIAIEGGaNTR---qPL--------PRIitIq~gGsA~~cgqLkv~~~ 63 (86)
-||+.+.||.... .|+ -.|..+..++.|+.+| |+.|-.
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~ 68 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDK 68 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCE
Confidence 5999999998752 122 3577899999999999 988754
No 104
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=90.00 E-value=0.048 Score=33.90 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=35.3
Q ss_pred EEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 17 ITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 17 i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
|++.|. ..-||+.+.||.....+ ..|..|..++.|..|+.|+.|-.
T Consensus 31 v~l~k~~~~glG~~l~~g~~~~~g-v~V~~V~~~spA~~~aGL~~GD~ 77 (112)
T 2lob_A 31 VLLLKEDHEGLGISITGGKEHGVP-ILISEIHPGQPADRCGGLHVGDA 77 (112)
Confidence 445443 47899999999776544 37889999999999888988753
No 105
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=90.52 E-value=0.2 Score=28.85 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=34.7
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.|++++. .-+|+.+.||.....+ ..|..+..++.|+.+| |+.|-..
T Consensus 6 ~v~~~~~-~~~G~~l~~~~~~~~g-~~V~~V~~~spA~~aG-l~~GD~I 51 (91)
T 2pkt_A 6 QIDLQGP-GPWGFRLVGGKDFEQP-LAISRVTPGSKAALAN-LCIGDVI 51 (91)
T ss_dssp EEEEESS-SCCSEEEEEEGGGTEE-EEEEEECTTSHHHHTT-CCTTCEE
T ss_pred EEEECCC-CCCCEEEEccCCCCCC-eEEEEECCCCHHHHcC-CCCCCEE
Confidence 4555554 5699999999776433 5788999999999998 8887543
No 106
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.35 E-value=0.075 Score=31.63 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=33.5
Q ss_pred EEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 17 ITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 17 i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
++|.+.. .-||+.+.||.....| +.|..|.+++.|+.+|.|+.|-.
T Consensus 13 ~~v~~~~~~~~G~~~~gg~~~~~~-v~V~~V~~~spA~~agGL~~GD~ 59 (100)
T 2edp_A 13 VPVQLQGGAPWGFTLKGGLEHCEP-LTVSKIEDGGKAALSQKMRTGDE 59 (100)
T ss_dssp EEEECCSCSCCCCCEEEEGGGTEE-EEECCCCTTSHHHHHTSCCTTCE
T ss_pred EEEEECCCCCcCEEEeccCCCCCC-eEEEEECCCCHHHHcCCCCCCCE
Confidence 4443332 3699999998775543 36678999999999988888754
No 107
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=90.33 E-value=0.31 Score=28.25 Aligned_cols=59 Identities=10% Similarity=0.080 Sum_probs=42.5
Q ss_pred EEEEeccCCceeeEEecCCCCCCC-CceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHP-LPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqP-LPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.|++.|...-||+.+.+..+...+ -..|..+..++.|+.+| |+.|-.. ++.++..-++.
T Consensus 6 ~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (96)
T 2v90_A 6 CLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQG 76 (96)
T ss_dssp EEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 477888888999999985443333 24677899999999999 8887543 35666666654
No 108
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=90.16 E-value=0.28 Score=30.70 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=41.8
Q ss_pred EEEEecc-CCceeeEEecCCCCCC--------CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKS-RPLLGMAIEGGANTKH--------PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~-~~~LGIAIEGGaNTRq--------PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|.+.|. .+-|||.+.|+..... .-..|..|..++.|..+|+|+.|-- +++.|+..-|+.
T Consensus 27 ~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 106 (123)
T 2iwq_A 27 RVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 106 (123)
T ss_dssp EEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4556655 4789999998765322 1247888999999999998988753 346777666654
Q ss_pred c
Q psy17151 76 S 76 (86)
Q Consensus 76 ~ 76 (86)
.
T Consensus 107 ~ 107 (123)
T 2iwq_A 107 A 107 (123)
T ss_dssp C
T ss_pred C
Confidence 3
No 109
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=89.97 E-value=0.28 Score=29.88 Aligned_cols=51 Identities=16% Similarity=0.246 Sum_probs=40.3
Q ss_pred EEEEeccCC-ceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSRP-LLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~-~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|++.|... -||+-+.+|. |..+.+++.|..+| |+.|-. .+..|+-+-||+
T Consensus 7 ~v~l~k~~~g~~Gf~i~~g~--------I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~ 69 (82)
T 1r6j_A 7 TITMHKDSTGHVGFIFKNGK--------ITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILST 69 (82)
T ss_dssp EEEEECCTTSCCCEEEETTE--------EEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEECCCCCeEEEEECCE--------EEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 477778765 5999999983 89999999999999 888864 466677666664
No 110
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=89.82 E-value=0.27 Score=32.45 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=43.8
Q ss_pred eEEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 15 LRITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
..|++.|. ..-||+.|.||..... -+.|..|..||.|..+| |+.|-.. ++.++...+++
T Consensus 86 ~~v~l~k~~~~~lG~~i~~~~~~~~-~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 156 (192)
T 3k1r_A 86 KEVRLDRLHPEGLGLSVRGGLEFGC-GLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT 156 (192)
T ss_dssp EEEEEETTSTTCCCEEEEEEGGGTE-EEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS
T ss_pred EEEEEEeCCCCceeEEEEcccccCC-CEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC
Confidence 45788887 6689999999876432 35788999999999999 9988643 35666655554
No 111
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=89.73 E-value=0.44 Score=28.95 Aligned_cols=58 Identities=14% Similarity=0.128 Sum_probs=43.1
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.|++.|...-+|+.+.++.... -..|..|..++.|+.+| |+.|-.. ++.++..-++..
T Consensus 12 ~v~l~~~~~g~G~~l~~~~~~~--gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (128)
T 2kjd_A 12 LCTMKKGPSGYGFNLHSDKSKP--GQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (128)
T ss_dssp EEEEECCSSSCCEEEEECSSSC--SEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred EEEEecCCCcccEEEEecCCCC--CEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3677788788999999887532 45788899999999999 8887543 256666666543
No 112
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=89.54 E-value=0.57 Score=26.73 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=35.9
Q ss_pred ceEEEEeccC--CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 14 QLRITVKKSR--PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 14 nl~i~V~K~~--~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
...|++.|.. .-||+.+.||... .=..|..+..++.|+.+| |+.|-..
T Consensus 7 ~~~v~l~k~~~~~~~G~~~~~~~~~--~gv~V~~V~~~spA~~aG-l~~GD~I 56 (91)
T 1m5z_A 7 LHKVTLYKDSGMEDFGFSVADGLLE--KGVYVKNIRPAGPGDLGG-LKPYDRL 56 (91)
T ss_dssp EEEEEEECCTTCSSSSEEEEECTTS--SCEEEEEECTTSHHHHHT-CCTTCEE
T ss_pred eEEEEEEECCCCCCccEEEEeccCC--CCEEEEEECCCCHHHHcC-CCCCCEE
Confidence 4567777754 3699999998653 224688899999999998 8887543
No 113
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=89.42 E-value=0.56 Score=27.23 Aligned_cols=57 Identities=14% Similarity=0.143 Sum_probs=42.4
Q ss_pred EEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 17 ITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
+++.+...-+|+.+.++.+.. -..|..|..++.|+.+| |+.|-.. ++.++..-++++
T Consensus 13 ~~l~~~~~g~G~~~~~~~~~~--g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (98)
T 2jxo_A 13 CTMKKGPSGYGFNLHSDKSKP--GQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (98)
T ss_dssp EEEECTTTCCCEEEECCCSSS--CEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred EEEEeCCCcccEEEEecCCCC--CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 567777788999999887543 35688899999999998 8877533 366776666554
No 114
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.12 E-value=0.45 Score=27.96 Aligned_cols=46 Identities=15% Similarity=0.214 Sum_probs=33.9
Q ss_pred EEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|.. +.||+.+.++.....+ ..|..+..++.|+.+| |+.|-.
T Consensus 13 ~v~l~~~~~~~lG~~~~~~~~~~~g-v~V~~V~~~spA~~aG-L~~GD~ 59 (100)
T 2eeh_A 13 SVRVEKSPAGRLGFSVRGGSEHGLG-IFVSKVEEGSSAERAG-LCVGDK 59 (100)
T ss_dssp CEEECCCSSSSCSEEEECCTTTTCC-EEEEEECTTSHHHHHT-CCSSCE
T ss_pred EEEEEECCCCCccEEEEccccCCCC-EEEEEECCCCHHHHcC-CCCCCE
Confidence 36676665 4699999997653322 4677899999999999 887653
No 115
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=89.10 E-value=0.9 Score=29.32 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=45.9
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCC---CceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHP---LPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqP---LPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.+.|++.+....||+.+.+|.....| -..|..+..++.|..+|.|+.|-.. ++.|+..-+++
T Consensus 107 ~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 182 (200)
T 2qt5_A 107 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 182 (200)
T ss_dssp EEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 35566667778899999998654332 2367789999999999999988643 67777777765
No 116
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=89.00 E-value=0.66 Score=28.97 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=45.2
Q ss_pred ceEEEEeccCCceeeEEecCCCCCC----CCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKH----PLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRq----PLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
.+.+.+.+...-||+.+.++..... +=+.|..|..++.|..+|.|+.|-. .++.|+..-++.+
T Consensus 101 ~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 101 VMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred cEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 3456666777789999999876532 1236789999999999999988753 3466776666543
No 117
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=88.97 E-value=0.19 Score=28.44 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=39.7
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|++.|...-||+.+.++. | ..|..+..++.|+.+| |+.|-. +++.|+..-++.
T Consensus 5 ~v~l~~~~~g~G~~~~~~~----~-~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 69 (83)
T 2kv8_A 5 SVEVARGRAGYGFTLSGQA----P-CVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGK 69 (83)
T ss_dssp EEEECCCSSCCSCBCCCSS----S-CBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTT
T ss_pred EEEEEeCCCcccEEEEcCC----C-eEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4778888888899888753 3 5778889999999998 887753 334666655543
No 118
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.61 E-value=0.51 Score=28.12 Aligned_cols=57 Identities=9% Similarity=0.021 Sum_probs=39.7
Q ss_pred ccccceEEEEe-ccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 10 EVQGQLRITVK-KSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 10 d~~Gnl~i~V~-K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
+.+...++... +...-+|+.+.+| .|..+..++.|+.+| |+.|-. .++.++..-|++
T Consensus 9 ~~~~~~~~i~~~~~~~~lG~~~~~G--------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 77 (90)
T 1y7n_A 9 MGNVTTVLIRRPDLRYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSN 77 (90)
T ss_dssp CSSCEEEEEEESSTTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred cCCcceEEEEeCCCccccCeEecCC--------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 33444333333 3456789999887 788999999999999 888753 256777766664
No 119
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=88.06 E-value=0.64 Score=27.26 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=41.2
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.|++.|...-+|+.+.++.+.. =..|..+..++.|+.+| |+.|-.. ++.++...++.
T Consensus 9 ~v~l~k~~~g~G~~l~~~~~~~--g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (102)
T 2d90_A 9 VVVIKKGSNGYGFYLRAGPEQK--GQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK 76 (102)
T ss_dssp EEEEECCSSSSSCEEEECSSSS--SEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred EEEEeeCCCCccEEEEeecCCC--CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4777888888999999865432 35677899999999998 8876532 34566655554
No 120
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=88.03 E-value=0.65 Score=28.08 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=35.3
Q ss_pred ceEEEEeccC-CceeeEEecCCCCC-----CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSR-PLLGMAIEGGANTK-----HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~-~~LGIAIEGGaNTR-----qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...|++.|.. .-||+.|.||.... .+-..|..|..++.|. +.|+.|-.
T Consensus 15 ~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~--~gL~~GD~ 68 (117)
T 2csj_A 15 QYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDR 68 (117)
T ss_dssp EEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH--HHBCTTCE
T ss_pred EEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc--ccCCCCCE
Confidence 3457777775 78999999997642 2224688899999994 77888754
No 121
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=87.83 E-value=0.59 Score=27.48 Aligned_cols=45 Identities=11% Similarity=0.030 Sum_probs=34.5
Q ss_pred EEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|.. ..+|+.+.++.+... ..|..+..++.|+.+| |+.|-.
T Consensus 4 ~v~l~~~~~~~~G~~l~~~~~~~g--~~V~~V~~~spA~~aG-l~~GD~ 49 (106)
T 3ngh_A 4 ESKLSKQEGQNYGFFLRIEKDTDG--HLIRVIEEGSPAEKAG-LLDGDR 49 (106)
T ss_dssp EEEEECCTTCCCCCEEECCTTCCS--CEEECCCTTSHHHHTT-CCTTCE
T ss_pred EEEEEeCCCCeeCEEEEEEeCCCC--EEEEEeCCCCHHHHcC-CCCCCE
Confidence 35566665 789999998865433 4688999999999999 888754
No 122
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=87.72 E-value=0.57 Score=27.51 Aligned_cols=47 Identities=19% Similarity=0.288 Sum_probs=34.7
Q ss_pred ceEEEEeccCCceeeEEecCCCCC-------CCCceEEEEcCCCceeccCCCCCcee
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTK-------HPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTR-------qPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|++.|.. -||+.|.||...+ ..-..|..|..++.|+. .|+.|-.
T Consensus 12 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~ 65 (103)
T 1n7t_A 12 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDK 65 (103)
T ss_dssp CEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS--SCCTTCE
T ss_pred EEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH--CCCCCCE
Confidence 4678888876 6999999998642 22245667899999998 7887653
No 123
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=87.17 E-value=0.82 Score=27.51 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=36.2
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.|++.+...-||+.+.++... =..|..+..++.|+.+| |+.|-..
T Consensus 22 ~v~l~~~~~~lG~~~~~~~~~---gv~V~~V~~~spA~~aG-L~~GD~I 66 (117)
T 1uit_A 22 HVKVQKGSEPLGISIVSGEKG---GIYVSKVTVGSIAHQAG-LEYGDQL 66 (117)
T ss_dssp EEEEECSSCCCCEEEEECTTS---CEEEEEECTTSHHHHHT-CCTTCEE
T ss_pred EEEEEeCCCCccEEEEccCCC---CEEEEEECCCCHHHHcC-CCCCCEE
Confidence 688888888999999988642 24677899999999998 8887543
No 124
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=86.92 E-value=0.49 Score=30.29 Aligned_cols=59 Identities=15% Similarity=0.255 Sum_probs=40.9
Q ss_pred EEEEeccC----CceeeEEecCCCCC-----------CCCceEEEEcCCCceeccCCCCCceee-----------ehhhh
Q psy17151 16 RITVKKSR----PLLGMAIEGGANTK-----------HPLPRIINIHDKLKISSMSQIPTPYHF-----------TYREL 69 (86)
Q Consensus 16 ~i~V~K~~----~~LGIAIEGGaNTR-----------qPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~ 69 (86)
.|.+.|.. +.||+.|.||.... ..=..|..|..++.|+.+| |+.|--. ++.++
T Consensus 26 ~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~ 104 (139)
T 2vz5_A 26 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 104 (139)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHH
Confidence 45666644 47999999987621 1223677899999999999 8887543 36666
Q ss_pred hhhhhh
Q psy17151 70 KSDIRS 75 (86)
Q Consensus 70 ~~~~~~ 75 (86)
..-++.
T Consensus 105 ~~~l~~ 110 (139)
T 2vz5_A 105 RKRLTK 110 (139)
T ss_dssp HHHHCC
T ss_pred HHHHHh
Confidence 666654
No 125
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=86.71 E-value=0.39 Score=31.14 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=45.6
Q ss_pred cceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCce--------e---eehhhhhhhhhhc
Q psy17151 13 GQLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPY--------H---FTYRELKSDIRSS 76 (86)
Q Consensus 13 Gnl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~--------~---~~~~~~~~~~~~~ 76 (86)
..+.+.+.|...-||+.|.+. .+-+.|..|..+|.|+.+|+|+.|- . .++.|+..-|+..
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQN----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEE----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred ceEEEEEecCCceEeEEEEcC----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 456778889999999988762 2345788899999999999887753 2 3678888777764
No 126
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=86.57 E-value=1.1 Score=26.58 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=42.6
Q ss_pred eEEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceeee-----------hhhhhhhhhh
Q psy17151 15 LRITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHFT-----------YRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~~-----------~~~~~~~~~~ 75 (86)
++|++.|. ..-||+.+.++.+ .+-..|..+..++.|+.+|-|+.|-... +.++..-++.
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG 73 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSS--SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEcCCCCceeEEEEecCC--CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45677554 4679999998764 3446888999999999999878775432 5666666654
No 127
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=86.38 E-value=0.89 Score=27.49 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=42.6
Q ss_pred EEEEeccCC-ceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKKSRP-LLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~-~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.|++.|... -||+.+.++ ..-..|..|..++.|+.+|-|+.|-.. ++.|+..-++..
T Consensus 28 ~v~l~k~~~~~lG~~i~~~----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 96 (113)
T 1va8_A 28 IVRIEKARDIPLGATVRNE----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM 96 (113)
T ss_dssp EEEEEECTTCCCCEEEEEC----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred EEEEEeCCCCceeEEEEeC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 378888877 899999876 123467889999999999987887643 466776666543
No 128
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=86.32 E-value=1.5 Score=26.02 Aligned_cols=58 Identities=12% Similarity=0.140 Sum_probs=39.7
Q ss_pred EEE-eccCCceeeEEecCCCCCCC--------C---ceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhh
Q psy17151 17 ITV-KKSRPLLGMAIEGGANTKHP--------L---PRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDI 73 (86)
Q Consensus 17 i~V-~K~~~~LGIAIEGGaNTRqP--------L---PRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~ 73 (86)
+++ ++...-+|+.|.||...... . -.|..+..++.|+.+| |+.|-. +++.++..-+
T Consensus 11 v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (109)
T 1q3o_A 11 VLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMI 89 (109)
T ss_dssp EEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 444 35667899999998864311 1 2688899999999998 888753 3346666555
Q ss_pred hh
Q psy17151 74 RS 75 (86)
Q Consensus 74 ~~ 75 (86)
+.
T Consensus 90 ~~ 91 (109)
T 1q3o_A 90 RQ 91 (109)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 129
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=86.20 E-value=0.8 Score=26.65 Aligned_cols=56 Identities=13% Similarity=0.128 Sum_probs=39.4
Q ss_pred eEEEEeccC--CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhcc
Q psy17151 15 LRITVKKSR--PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSSR 77 (86)
Q Consensus 15 l~i~V~K~~--~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~~ 77 (86)
+.+++.|.. .-+|+.+.|| -.|..|..+|.|..+|+|+.|-. .++.|+..-|+++.
T Consensus 2 l~v~l~~~~~~~~~G~~~~~g-------v~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 70 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGSQ-------IFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR 70 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEEE-------EEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCCCCEEEeCC-------EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 455666544 3578888763 35678999999999999998753 36677776676543
No 130
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=86.15 E-value=0.53 Score=27.37 Aligned_cols=58 Identities=7% Similarity=0.016 Sum_probs=40.5
Q ss_pred EEEEeccCCceeeEEecCCCCC--CCCc----eEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTK--HPLP----RIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIR 74 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTR--qPLP----RIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~ 74 (86)
.|+++|...-+|+.+.++.... .+.. .|..+..++.|+.+| |+.|--. ++.++..-++
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLL 79 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4677888899999998765321 1221 577899999999998 8887643 4566666555
No 131
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=85.58 E-value=0.82 Score=26.73 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=32.6
Q ss_pred EEEec--cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCce
Q psy17151 17 ITVKK--SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPY 62 (86)
Q Consensus 17 i~V~K--~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~ 62 (86)
+++.+ ...-||+.+.++.....+ ..|..|..++.|+.+| |+.|-
T Consensus 12 v~l~~~~~~~~lG~~~~~~~~~~~g-~~V~~V~~~spA~~aG-L~~GD 57 (101)
T 1uez_A 12 VSLRRAKAHEGLGFSIRGGSEHGVG-IYVSLVEPGSLAEKEG-LRVGD 57 (101)
T ss_dssp ECCCCCCTTTCSSEEEEECTTTTCC-EEEEEECTTSHHHHHT-CCSSC
T ss_pred EEEEECCCCCcccEEEeCCCCCCCC-EEEEEECCCCHHHHcC-CCCCC
Confidence 44444 345799999998754433 4677899999999998 88775
No 132
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=85.37 E-value=0.72 Score=27.06 Aligned_cols=50 Identities=10% Similarity=0.066 Sum_probs=36.3
Q ss_pred cccceEEEEe-ccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 11 VQGQLRITVK-KSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 11 ~~Gnl~i~V~-K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
+--.+.+++. +...-||+.+.+. ..+ ..|..|..++.|..+|+|+.|-..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~---~~g-v~V~~V~~~spA~~aG~L~~GD~I 56 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN---EIG-CTIADLIQGQYPEIDSKLQRGDII 56 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC---SSS-EEEEEECTTSCHHHHHHCCTTCEE
T ss_pred HCceEEEEEEeCCCCCccEEEEeC---CCc-EEEEEeCCCChHHhcCCCCCCCEE
Confidence 3445677774 4667789988771 122 578899999999999988887543
No 133
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.05 E-value=0.72 Score=27.02 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=40.6
Q ss_pred EEEe-ccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee----------eehhhhhhhhhhc
Q psy17151 17 ITVK-KSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH----------FTYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~-K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~----------~~~~~~~~~~~~~ 76 (86)
|++. +...-||+.+.+. ..-..|..+..++.|+.+|.|+.|-. .++.|+..-++.+
T Consensus 10 v~l~k~~~~~lG~~i~~~----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~ 76 (91)
T 2e7k_A 10 VGIRKTAGEHLGVTFRVE----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA 76 (91)
T ss_dssp CCBCCCTTCCCCEEEEES----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC
T ss_pred EEEEECCCCcEeEEEEec----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC
Confidence 4443 4556799999982 22356779999999999999987642 4778887777753
No 134
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=85.01 E-value=0.92 Score=27.63 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=33.3
Q ss_pred eEEEEe-ccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 15 LRITVK-KSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 15 l~i~V~-K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
+.|++. +...-||+.+.+. .. =..|..|..||.|..+|+|+.|-..
T Consensus 4 ~~v~L~k~~~~glG~~i~~~---~~-gv~V~~V~~gspA~~aG~L~~GD~I 50 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSPN---EI-GCTIADLIQGQYPEIDSKLQRGDII 50 (106)
T ss_dssp EEEEECCBSSSTTCCEEEEC---SS-SEEEEECCTTSCHHHHTTCCTTCEE
T ss_pred EEEEEEeCCCCccCEEEEeC---CC-CEEEEEECCCCHHHHCCCCCCCCEE
Confidence 456664 5667789988771 11 2468889999999999999887543
No 135
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=84.94 E-value=1.1 Score=27.39 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=41.8
Q ss_pred EEEEec-cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKK-SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K-~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.|.+.| ...-||+.+.++.+ . -..|..|.+++.|..+|.|+.|-.. ++.|+.+-|+.+
T Consensus 15 ~v~l~K~~~~~lG~~l~~~~~--~-gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~ 84 (97)
T 2ejy_A 15 LIQFEKVTEEPMGICLKLNEK--Q-SCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET 84 (97)
T ss_dssp EEEEEECSSSCCSEEEEECTT--C-CEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC
T ss_pred EEEEEeCCCCCeeEEEEeCCC--C-CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345555 44679999987533 2 3578899999999999999887532 477887777653
No 136
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=84.37 E-value=1.9 Score=26.39 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=33.1
Q ss_pred EEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.+.|... ...||+.+.++...+.+ ..|..+..++.|+.+| |+.|-.
T Consensus 23 ~v~v~~~~~~~lG~~~~~~~~~~~g-v~V~~V~~~spA~~aG-L~~GD~ 69 (128)
T 1uf1_A 23 KVNLVLGDGRSLGLTIRGGAEYGLG-IYITGVDPGSEAEGSG-LKVGDQ 69 (128)
T ss_dssp EEEEECCSSCCCCEEEECCTTTTCC-CEEEEECTTCHHHHHT-CCTTCE
T ss_pred EEEEEECCCCccCEEEECcccCCCC-EEEEEECCCCHHHHCC-CCCCCE
Confidence 3555533 26789999997655433 4677899999999998 887754
No 137
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=84.23 E-value=1.6 Score=25.72 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=40.9
Q ss_pred EEEEecc-CCceeeEEecCCC------CCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKKS-RPLLGMAIEGGAN------TKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~-~~~LGIAIEGGaN------TRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.+.+.|. ...+|+.|.|..- ....-..|..+..++.|+.+| |+.|-.. ++.|+..-|+..
T Consensus 18 ~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 95 (104)
T 2z17_A 18 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSS 95 (104)
T ss_dssp EEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHT
T ss_pred EEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhC
Confidence 4556665 3568999998321 122346788999999999999 8887532 566776666654
No 138
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=84.21 E-value=1.4 Score=27.54 Aligned_cols=46 Identities=7% Similarity=0.161 Sum_probs=34.0
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.++...+...-||+.+.||.. .=..|..+..++.|..+| |+.|-..
T Consensus 30 ~~~~~~~~~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG-L~~GD~I 75 (124)
T 3tsv_A 30 MKLVKFRKGDSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQI 75 (124)
T ss_dssp CEEEEEECSSCCCEEEEECTT---SCEEEEEECTTCHHHHTT-CCTTEEE
T ss_pred eEEEEcCCCCceeEEEecCCC---CCEEEEEECCCCHHHHcC-CCCCCEE
Confidence 444444445679999998765 235678899999999999 9887643
No 139
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=83.78 E-value=1.3 Score=27.71 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=33.0
Q ss_pred EEEEeccCC---ceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 16 RITVKKSRP---LLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 16 ~i~V~K~~~---~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.|++.|... .+|+.+.++......=..|..+.+++.|+.+| |+.|-..
T Consensus 9 ~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I 59 (94)
T 3kzd_A 9 SIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEI 59 (94)
T ss_dssp EEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEE
T ss_pred EEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEE
Confidence 366777664 69999988543222236677899999999988 8888654
No 140
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=83.07 E-value=0.21 Score=29.07 Aligned_cols=62 Identities=23% Similarity=0.305 Sum_probs=40.3
Q ss_pred cceEEEEec-cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 13 GQLRITVKK-SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 13 Gnl~i~V~K-~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
|...+++.+ ...-||+.+.||.....+ ..|..+..++.|+.+| |+.|-- +++.++..-++..
T Consensus 4 g~~~~~~~~~~~~~lG~~l~~g~~~~~g-~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (94)
T 1vb7_A 4 GSSGLTVDVAGPAPWGFRISGGRDFHTP-IIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQS 77 (94)
T ss_dssp CCCCEEEEECSSSCCSBCCEEETTTTEE-EECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ccEEEEEEecCCCCccEEEecccCCCCC-eEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 444444432 345699999998875433 3677889999999876 776642 3346666666543
No 141
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=82.74 E-value=1.4 Score=30.66 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=43.1
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|++.|...-+|+.+.++.+. +-..|..|..|+.|+.+| |+.|-. +++.++..-|+.
T Consensus 12 ~v~l~k~~~glG~~l~~~~~~--~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~ 79 (216)
T 2krg_A 12 LCTMKKGPSGYGFNLHSDKSK--PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (216)
T ss_dssp EEEEECCSSSSCEEECCCSSS--CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHH
T ss_pred EEEEEeCCCCceEEEEecCCC--CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 477788888899999988753 345788999999999998 887752 356666665554
No 142
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.70 E-value=0.82 Score=26.85 Aligned_cols=44 Identities=7% Similarity=-0.059 Sum_probs=34.0
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCce
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPY 62 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~ 62 (86)
.|++.|...-||+.+.++.+. +-..|..+..++.|+.+| |+.|-
T Consensus 11 ~v~l~k~~~~~G~~l~~~~~~--~g~~V~~V~~~spA~~aG-l~~GD 54 (106)
T 2eei_A 11 LCYLVKEGGSYGFSLKTVQGK--KGVYMTDITPQGVAMRAG-VLADD 54 (106)
T ss_dssp EEEEECCSSSCSCCEECCSSC--CSCEECCCCTTSHHHHHT-CCSSE
T ss_pred EEEEEECCCCCCEEEEeccCC--CCEEEEEECCCCHHHHcC-CCCCC
Confidence 367778778899999877543 234678899999999998 88765
No 143
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=80.22 E-value=1.2 Score=27.19 Aligned_cols=60 Identities=13% Similarity=0.142 Sum_probs=42.9
Q ss_pred ceEEEEeccC-CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 14 QLRITVKKSR-PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V~K~~-~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
-.+|++.|.. .-||+.+.++.+ .+-..|..|..++.|+.+|-|+.|-. .++.|+..-++.
T Consensus 9 ~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~ 80 (127)
T 1b8q_A 9 VISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG 80 (127)
T ss_dssp SEEEEEECTTTSCCSCCEEECTT--SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHS
T ss_pred eEEEEEEeCCCCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567777765 789999998764 23456778999999999997676532 236777666654
No 144
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=78.65 E-value=0.95 Score=33.47 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=40.5
Q ss_pred ccccceEEEEecc-CCceeeEEecCCC-CCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 10 EVQGQLRITVKKS-RPLLGMAIEGGAN-TKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 10 d~~Gnl~i~V~K~-~~~LGIAIEGGaN-TRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
+.+.-=.|++.|. ..-||+.|.|+.+ ...|-+.|..|..|+.|..+|.|+.|-..
T Consensus 201 ~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~I 257 (388)
T 3suz_A 201 NSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQI 257 (388)
T ss_dssp CSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEE
T ss_pred ccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEE
Confidence 3444446777776 4689999988543 33444688999999999999999988654
No 145
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=77.91 E-value=2.5 Score=26.31 Aligned_cols=55 Identities=18% Similarity=0.171 Sum_probs=40.0
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
.|++.|...-+|+.+.|.. | ..|..+..++.|..+| |+.|-.. ++.|+..-|+..
T Consensus 26 ~v~l~k~~~~~G~~l~~~~----~-v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~ 91 (109)
T 2vsv_A 26 SIRFTAEEGDLGFTLRGNA----P-VQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF 91 (109)
T ss_dssp EEEECCGGGCCCEEEESSS----S-CEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred EEEEEeCCCceeEEEeCCC----C-eEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4778888888899887652 2 3578999999999987 7776533 556777666543
No 146
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=75.74 E-value=2.1 Score=32.07 Aligned_cols=43 Identities=9% Similarity=0.205 Sum_probs=32.6
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
.|++.|..+ ||+-|.||.. .=-.|..|..||.|..+| |+.|-.
T Consensus 12 ~v~~~k~~~-lG~~i~gg~~---~gi~V~~V~~gspA~~aG-L~~GD~ 54 (391)
T 3tsz_A 12 LVKFRKGDS-VGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQ 54 (391)
T ss_dssp EEEEECCSS-CCEEEEEETT---TEEEEEEECTTCHHHHTT-CCTTEE
T ss_pred EEEeecCCc-eeEEEEecCC---CCEEEEEECCCCHHHHcC-CCCCCE
Confidence 355666664 9999999864 112577899999999999 998854
No 147
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.71 E-value=1.2 Score=27.96 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=33.5
Q ss_pred eEEEEeccCC---ceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSRP---LLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~~---~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
-.|++.|... .+|+.|.++......-+.|..+..++.|+.+| |+.|-.
T Consensus 17 ~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~ 67 (114)
T 2d8i_A 17 QSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDE 67 (114)
T ss_dssp EEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCC
T ss_pred EEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCE
Confidence 4566666665 58999987432211235677899999999998 887753
No 148
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=74.38 E-value=1 Score=26.56 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=40.8
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.+.+++.+...-+|+.+.++ .| ..|..+..++.|+.+| |+.|-.. ++.++..-++.
T Consensus 16 ~~~v~l~~~~~g~G~~~~~~----~~-~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 82 (100)
T 1whd_A 16 KLQITIRRGKDGFGFTICCD----SP-VRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS 82 (100)
T ss_dssp EEEEEEECCSSSSSCBCCCS----SS-CBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEECCCCeeeEEEeCC----CC-EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46788888888899988775 23 5788899999999987 8877533 45666655554
No 149
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=74.30 E-value=2.5 Score=23.01 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=33.6
Q ss_pred cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 22 SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
.+.-+|+.+.+| ..|..+..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 11 ~~~~~g~~~~~g-------v~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 68 (81)
T 2rcz_A 11 KNEEYGLRLASH-------IFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 68 (81)
T ss_dssp TTCCCCEEEEEE-------EEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCCEEEeCC-------EEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHC
Confidence 445678877644 578889999999999988886533 56666665554
No 150
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=72.77 E-value=4.3 Score=22.87 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=29.3
Q ss_pred eEEEEeccCC---ceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCce
Q psy17151 15 LRITVKKSRP---LLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPY 62 (86)
Q Consensus 15 l~i~V~K~~~---~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~ 62 (86)
+++.+.+... -||+.+... .+=+.|..+..++.|+.+| |+.|-
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD 50 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD----IPGIFVASVEAGSPAEFSQ-LQVDD 50 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTC
T ss_pred eEEEEEecCCCCCcccEEEEec----CCCEEEEEECCCChHHHcC-CCCCC
Confidence 4566555443 589887632 1235778899999999987 77764
No 151
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=72.70 E-value=4.5 Score=32.13 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=42.4
Q ss_pred EEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhh
Q psy17151 16 RITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRS 75 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~ 75 (86)
.|++.|...-||+.|.||... .-..|..|..||.|..+|.|+.|-. .++.|+..-++.
T Consensus 310 ~v~l~~~~~~lG~~i~~~~~~--~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~ 378 (721)
T 2xkx_A 310 RIVIHRGSTGLGFNIVGGEDG--EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 378 (721)
T ss_pred EEEEEECCCCccEEEeccCCC--CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456677777799999987542 2346788999999999998888753 246666666654
No 152
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=71.00 E-value=5.5 Score=22.35 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=36.1
Q ss_pred eEEEEecc--CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 15 LRITVKKS--RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~--~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
++|+..+. +.-+|+.+.. =..|..+..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 4 ~~v~~~~~~~~~~~g~~~~~-------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 70 (92)
T 3cyy_A 4 TKVTLVKSAKNEEYGLRLAS-------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 70 (92)
T ss_dssp EEEEEECSSTTSCCCEEEEE-------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEeCCCCCCCCEEEeC-------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34444433 3467887762 2467889999999999989887543 56666665554
No 153
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=70.88 E-value=12 Score=21.03 Aligned_cols=56 Identities=9% Similarity=0.013 Sum_probs=36.3
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
..|++.|...-||+.+.++.+. -+.+|..-.++.|+ ..|+.|-.. ++.++...++.
T Consensus 5 ~~v~l~k~~~g~G~~~~~~~~~---~~~~v~~v~~spA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 71 (88)
T 3bpu_A 5 ITVHIVKGPMGFGFTIADSPGG---GGQRVKQIVDSPRS--RGLKEGDLIVEVNKKNVQALTHNQVVDMLVE 71 (88)
T ss_dssp EEEEEECBTTBSSCEEEECTTS---SSEEEEECCC--CC--TTCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EEEEEEcCCCceeEEEEecCCC---CcEEEEEecCChhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 4678888888899999977542 24555555777776 578887543 34666665553
No 154
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=69.19 E-value=0.96 Score=26.73 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=40.2
Q ss_pred eEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 15 LRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 15 l~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
++|.++ ...-||+.+.+|.....+ ..|..+..++.|+.+| |+.|-.. ++.++..-++..
T Consensus 7 ~~v~~~-~~~~lG~~l~~g~~~~~~-~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (103)
T 1v5l_A 7 GNVVLP-GPAPWGFRLSGGIDFNQP-LVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA 76 (103)
T ss_dssp BCCEEE-SSSCCSBCCEEETTTTEE-EECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC
T ss_pred EEEEEc-CCCCcCEEEeccccCCCC-eEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345454 445799999998765433 4667889999999987 8877533 367776666543
No 155
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=68.20 E-value=4.2 Score=25.90 Aligned_cols=45 Identities=11% Similarity=0.040 Sum_probs=32.3
Q ss_pred eEEEEecc-CCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKS-RPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~-~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
+.+...+. ...||+.+.++. +-+.|..|..++.|..+|.|+.|-.
T Consensus 115 ~~v~l~~~~~~~lG~~~~~~~----~gv~V~~V~~gs~A~~aG~L~~GD~ 160 (206)
T 3r0h_A 115 FNVDLMKKAGKELGLSLSPNE----IGCTIADLIQGQYPEIDSKLQRGDI 160 (206)
T ss_dssp EEEEEECCTTCCCCEEEEECS----SCEEEEEECTTSCHHHHHHCCTTCE
T ss_pred EEEEEecCCCCccCeEEEcCC----ceEEEEEECCCChHHHcCCCCCCCE
Confidence 34444343 356899988653 2367889999999999998988754
No 156
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=63.97 E-value=7.7 Score=24.54 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=27.4
Q ss_pred ceeeEEecCCCC-------CCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 25 LLGMAIEGGANT-------KHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 25 ~LGIAIEGGaNT-------RqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
-||+.|.||... ...=-.|..|..++.|.. .|+.|-..
T Consensus 3 g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~--gl~~GD~I 47 (195)
T 2qbw_A 3 ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKI 47 (195)
T ss_dssp CSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT--TCCTTCEE
T ss_pred cccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh--CCCCCCEE
Confidence 489999999753 122235678999999998 68887543
No 157
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=61.64 E-value=7.2 Score=30.56 Aligned_cols=54 Identities=9% Similarity=0.140 Sum_probs=39.2
Q ss_pred EEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 17 ITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 17 i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
|++.|. .-||+-|.||.. .+ --|..|..||.|..+| |+.|-.. |..|+..-|+.
T Consensus 5 V~l~k~-~~lG~~i~gg~~--~G-i~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~ 69 (468)
T 3shw_A 5 VKFRKG-DSVGLRLAGGND--VG-IFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLD 69 (468)
T ss_dssp EEEECC-SSCCEEEEEETT--TE-EEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEecC-CccceEEEccCc--CC-EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 566775 669999999854 12 3477899999999998 9998643 45666655554
No 158
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=61.17 E-value=6.3 Score=24.01 Aligned_cols=51 Identities=14% Similarity=0.033 Sum_probs=35.8
Q ss_pred ceeeEEecCCCCC-CCCceEEEEcCCCceeccCCCCCceee---------ehhhhhhhhhh
Q psy17151 25 LLGMAIEGGANTK-HPLPRIINIHDKLKISSMSQIPTPYHF---------TYRELKSDIRS 75 (86)
Q Consensus 25 ~LGIAIEGGaNTR-qPLPRIitIq~gGsA~~cgqLkv~~~~---------~~~~~~~~~~~ 75 (86)
-||+.+.+..... ..-..|..|..++.|+.+|+|+.|-.. ++.++..-++.
T Consensus 33 ~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~ 93 (124)
T 1wh1_A 33 KLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTS 93 (124)
T ss_dssp CCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTC
T ss_pred cccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHh
Confidence 6899998765321 223567789999999999988877543 35666666654
No 159
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.57 E-value=6 Score=23.06 Aligned_cols=42 Identities=10% Similarity=0.146 Sum_probs=30.6
Q ss_pred eEEEEeccC--CceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 15 LRITVKKSR--PLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 15 l~i~V~K~~--~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
..|++.|.. .-+|+.+.|. .| ..|..|.+++.| . +.|+.|-.
T Consensus 10 ~~v~l~~~~~~~~~G~~l~~~----~~-~~V~~V~~~spA-~-agL~~GD~ 53 (96)
T 2edv_A 10 HTVKIDKDTLLQDYGFHISES----LP-LTVVAVTAGGSA-H-GKLFPGDQ 53 (96)
T ss_dssp EEEEECCCSSSCSCSBCCCSS----SS-CBCCCBCSSSSS-T-TTSCTTCB
T ss_pred EEEEEEECCCCCcccEEEecC----CC-eEEEEECCCCch-h-hCCCCCCE
Confidence 567777776 4589999872 22 467789999999 4 78888754
No 160
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=57.38 E-value=10 Score=22.57 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=35.4
Q ss_pred cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhh
Q psy17151 22 SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRS 75 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~ 75 (86)
....+|+.+.++.+.. =..|..+..++.|+.+| |+.|-.. ++.++..-++.
T Consensus 23 ~~~~~G~~l~~~~~~~--g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (114)
T 2edz_A 23 EGQNYGFFLRIEKDTD--GHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK 84 (114)
T ss_dssp TTCCCSCEEECCTTCC--SCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHH
T ss_pred CCCcccEEEEEecCCC--CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567899888765442 24788899999999998 7776432 34666655553
No 161
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=51.17 E-value=15 Score=22.98 Aligned_cols=44 Identities=7% Similarity=-0.001 Sum_probs=32.6
Q ss_pred EEEEec-cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee
Q psy17151 16 RITVKK-SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF 64 (86)
Q Consensus 16 ~i~V~K-~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~ 64 (86)
.|++.| ...-||+.+.+.. .=..|..+..++.|+.+| |+.|-..
T Consensus 7 ~v~l~k~~~~~lG~~~~~~~----~g~~V~~v~~~spA~~aG-l~~GD~I 51 (166)
T 1w9e_A 7 EVILCKDQDGKIGLRLKSID----NGIFVQLVQANSPASLVG-LRFGDQV 51 (166)
T ss_dssp EEEEECCTTSCCSEEEEEET----TEEEEEEECTTSHHHHTT-CCTTCEE
T ss_pred EEEEEeCCCCcEeEEEEeCC----CCEEEEEECCCChHHHcC-CCCCCEE
Confidence 356666 4568999998732 335788999999999997 9887654
No 162
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=50.90 E-value=7.9 Score=25.98 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.6
Q ss_pred cCCceeeEEecCCCCCCCCc
Q psy17151 22 SRPLLGMAIEGGANTKHPLP 41 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqPLP 41 (86)
|...+||+++|+-+...|-+
T Consensus 94 N~~SiGI~~iG~~~~~~Pt~ 113 (167)
T 2f2l_A 94 DSQSLSFAYIGSFKTIQPSA 113 (167)
T ss_dssp HTTCEEEEESSCCSSSCCCH
T ss_pred CCCcEEEEEECCCCCCCCCH
Confidence 56789999999999887744
No 163
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=50.10 E-value=4 Score=25.08 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=38.8
Q ss_pred EEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee-----------eehhhhhhhhhhc
Q psy17151 17 ITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH-----------FTYRELKSDIRSS 76 (86)
Q Consensus 17 i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~-----------~~~~~~~~~~~~~ 76 (86)
|++.|...-+|+.+.|+. | ..|..+..++.|+.+| |+.|-. +++.|+..-|+..
T Consensus 19 v~l~~~~~~~G~~l~~~~----~-v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~ 83 (111)
T 1vae_A 19 IHFTVEEGDLGFTLRGNT----P-VQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSF 83 (111)
T ss_dssp CCEECCSSCCSCCEESSS----S-CEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHT
T ss_pred EEEEcCCCcccEEEeCCC----C-EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 667777788899887763 2 3577889999999886 777643 3677777766654
No 164
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.11 E-value=5.9 Score=24.21 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=41.0
Q ss_pred EEEEeccCCceeeEEecCC----------------------CCCC-----CCceEEEEcCCCceeccCCCCCcee-----
Q psy17151 16 RITVKKSRPLLGMAIEGGA----------------------NTKH-----PLPRIINIHDKLKISSMSQIPTPYH----- 63 (86)
Q Consensus 16 ~i~V~K~~~~LGIAIEGGa----------------------NTRq-----PLPRIitIq~gGsA~~cgqLkv~~~----- 63 (86)
.|++.|...-||+.+.+.. ..+. .-..|..|..++.|+.+| |+.|-.
T Consensus 11 ~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~in 89 (126)
T 2yuy_A 11 TVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIKVN 89 (126)
T ss_dssp CEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCCEET
T ss_pred EEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEEEEC
Confidence 4777888888999997521 1121 124677899999999998 887643
Q ss_pred ------eehhhhhhhhhh
Q psy17151 64 ------FTYRELKSDIRS 75 (86)
Q Consensus 64 ------~~~~~~~~~~~~ 75 (86)
.++.|+..-|+.
T Consensus 90 g~~v~~~~~~~~~~~l~~ 107 (126)
T 2yuy_A 90 GESVIGKTYSQVIALIQN 107 (126)
T ss_dssp TEECSSCCHHHHHHHHHT
T ss_pred CEECCCCCHHHHHHHHHc
Confidence 267777777764
No 165
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=44.46 E-value=13 Score=24.68 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=24.3
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -|...+||+++|+.....|
T Consensus 64 igyhflI~~dG~I~egr~~~~~gaHa~~~N~~SIGI~~~G~~~~~~p 110 (167)
T 2f2l_X 64 IGYNFLVGGDGRVYEGRGWDYVGAHTKGYNRGSIGISFIGTFTTRKP 110 (167)
T ss_dssp CSCSEEECTTSCEEESSCTTBCCSSSTTCSTTCEEEEESSCCSSSCC
T ss_pred cCceEEECCCCEEEEcCCCcccccccCCCCCCEEEEEEECCCCCCCC
Confidence 455666666666543221 2567899999999777665
No 166
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=40.75 E-value=16 Score=23.92 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=24.1
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -|...+||+++|+.+...|
T Consensus 62 igyhflI~~dG~I~egr~~~~~gaH~~g~N~~SIGIe~~G~~~~~~p 108 (163)
T 1sk4_A 62 IGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPP 108 (163)
T ss_dssp CSCSEEECTTSCEEESSCTTBCCCSSTTCTTTEEEEEESSCCSSSCC
T ss_pred cCceEEECCCCEEEEcCCCCccccccCCcCCCeEEEEEecCCCCCCC
Confidence 456666677776543222 2456899999998776554
No 167
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=40.17 E-value=17 Score=24.07 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=24.5
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+++.+.|.+|++---+. -|...+||+++|+..+..|
T Consensus 65 igyhflI~~dG~I~~gr~~~~~gah~~g~N~~SIGIe~~G~~~~~~p 111 (169)
T 2rkq_A 65 IGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAP 111 (169)
T ss_dssp CSCSEEECTTSCEEECSCTTBCCSSSGGGCTTEEEEEESSCCSSSCC
T ss_pred cCCcEEECCCCEEEEcCCCCccccccCCcCCCeEEEEEEcCCCCCCC
Confidence 456666677776543221 2467899999998776655
No 168
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=38.64 E-value=16 Score=21.91 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=14.9
Q ss_pred cccceEEEEeccCCceee
Q psy17151 11 VQGQLRITVKKSRPLLGM 28 (86)
Q Consensus 11 ~~Gnl~i~V~K~~~~LGI 28 (86)
.+|-|.|++.|..++..+
T Consensus 83 ~~GvL~I~lpK~~~~~d~ 100 (102)
T 4fei_A 83 AGGVLTVRFEKLRPTIDV 100 (102)
T ss_dssp ETTEEEEEEEBSSCCCCC
T ss_pred ECCEEEEEEEccCccccC
Confidence 479999999999987653
No 169
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=38.55 E-value=19 Score=24.09 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=24.2
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -|...+||+++|+.....|
T Consensus 71 igyhflI~~dG~I~egr~~~~~gaH~~g~N~~SIGIe~~G~~~~~~p 117 (180)
T 2xz4_A 71 IGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEP 117 (180)
T ss_dssp CSCSEEECTTSCEEESSCSSBCCCCSSCCCCSCEEEEESSCCSSSCC
T ss_pred cCceEEECCCCEEEECCCCcccccccCCcCCCeEEEEEECCCCCCCC
Confidence 356666666666543221 2556899999998776655
No 170
>1sxr_A Peptidoglycan recognition protein SA CG11709-PA; pattern recognition receptor, innate immunity pathway, immune system; 1.56A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=37.46 E-value=19 Score=24.46 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=23.7
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -|...+||+++|+.....|
T Consensus 74 IgyhflI~~dG~I~egR~~~~~GaH~~g~N~~SIGIe~~G~~~~~~P 120 (183)
T 1sxr_A 74 ISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLP 120 (183)
T ss_dssp CSSSEEECTTCCEEESSCTTBCCSSSTTSTTTEEEEEESSCCSSSCC
T ss_pred CCceEEECCCCEEEECCCccccccccCCcCCCceEEEEECCCCCCCC
Confidence 355666666666432211 2456899999998776666
No 171
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=32.73 E-value=9.3 Score=28.15 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=0.0
Q ss_pred cCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCcee
Q psy17151 22 SRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYH 63 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~ 63 (86)
...-||+.+.|| .|..|..||.|..+| |+.|-.
T Consensus 306 ~~~~lG~~i~~g--------~I~~V~~gs~A~~aG-L~~GD~ 338 (388)
T 3suz_A 306 LKYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHR 338 (388)
T ss_dssp ------------------------------------------
T ss_pred CCCccceEEecC--------EEEEeecCCHHHHcC-CCCCCE
Confidence 334578877775 677999999999999 998754
No 172
>1s2j_A Peptidoglycan recognition protein SA CG11709-PA; mixed beta-sheet, PI-helix (ONE turn), hydrolase; 2.20A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=32.30 E-value=25 Score=24.63 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=23.6
Q ss_pred ccceeeeccccceEEEE----------eccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITV----------KKSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V----------~K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+ .-|...+||+++|+.....|
T Consensus 100 IgyHflI~~dG~IyegR~w~~~GaH~~g~N~~SIGIeliG~~~~~~P 146 (209)
T 1s2j_A 100 ISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLP 146 (209)
T ss_dssp CSSSEEECTTSCEEESSCTTBCCSSSTTCSSSEEEEEESSCCSSSCC
T ss_pred cCCCeEECCCCeEeeCCCccccccccCCcCCCceEEEEeCCCCCCCC
Confidence 35566666666643221 12456899999998776666
No 173
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=30.08 E-value=23 Score=23.73 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=13.8
Q ss_pred cCCceeeEEecCCCCCCC
Q psy17151 22 SRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqP 39 (86)
|...+||+++|+.+...|
T Consensus 102 N~~SIGIe~~G~~~~~~p 119 (175)
T 1yck_A 102 NPMSIGISFMGNYMDRVP 119 (175)
T ss_dssp GGGEEEEEESSCCSSSCC
T ss_pred CCCcEEEEEeCCCCCCCC
Confidence 446799999998766555
No 174
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=28.52 E-value=27 Score=28.49 Aligned_cols=17 Identities=24% Similarity=0.555 Sum_probs=15.1
Q ss_pred CCCCCCceEEEEcCCCc
Q psy17151 35 NTKHPLPRIINIHDKLK 51 (86)
Q Consensus 35 NTRqPLPRIitIq~gGs 51 (86)
..|-|.||+|..+.|||
T Consensus 701 ~~R~p~Pr~i~~~~g~s 717 (769)
T 2nut_A 701 HSRFPMPRYIDTEHGGS 717 (769)
T ss_dssp HHSSSCCEEEEEETTCS
T ss_pred hcCCCCCeEEEEcCCCc
Confidence 35999999999999986
No 175
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=28.18 E-value=25 Score=23.38 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=23.8
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -+...+||+++|+.....|
T Consensus 68 igyhflI~~dG~I~egr~~~~~gaH~~~~N~~SIGIe~~G~~~~~~p 114 (175)
T 2cb3_A 68 IAYNFLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELP 114 (175)
T ss_dssp CSCSEEECTTSCEEESSCTTBCCSSSTTTGGGEEEEEESSCCSSSCC
T ss_pred cCceEEECCCCEEEECCCCCcccccCCCcCCCeEEEEEECCCCCCCC
Confidence 456666666666543221 2446799999998766555
No 176
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=27.52 E-value=76 Score=19.62 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=23.3
Q ss_pred ccceeeeccccceEEEEeccCCceeeEEecCCCC
Q psy17151 3 LSNVVISEVQGQLRITVKKSRPLLGMAIEGGANT 36 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~K~~~~LGIAIEGGaNT 36 (86)
++..|-.|.-|||-.+.....| .|.+.|=.-|
T Consensus 43 ~G~~v~~D~~GNlia~~~g~~p--~lll~~H~Dt 74 (354)
T 2wzn_A 43 VADEVKVDKLGNVIAHFKGSSP--RIMVAAHMDK 74 (354)
T ss_dssp TSSEEEECTTCCEEEEECCSSS--EEEEEEECCB
T ss_pred cCCEEEEeCCCeEEEEECCCCc--eEEEEecccc
Confidence 4556778999999998887777 4556665555
No 177
>1oht_A CG14704 protein; peptidoglycan-recognition protein-LB isoform 2, hydrolase; HET: TLA; 2.0A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=26.52 E-value=36 Score=23.82 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=24.7
Q ss_pred ccceeeeccccceEEEEe----------ccCCceeeEEecCCCCCCC
Q psy17151 3 LSNVVISEVQGQLRITVK----------KSRPLLGMAIEGGANTKHP 39 (86)
Q Consensus 3 ~~~~vv~d~~Gnl~i~V~----------K~~~~LGIAIEGGaNTRqP 39 (86)
.+.+.+.|.+|++---+. -|...+||+++|+.+...|
T Consensus 76 IgyHflI~~dG~I~egR~~~~~GaHa~g~N~~SIGIeliG~~~~~~p 122 (215)
T 1oht_A 76 IGYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELP 122 (215)
T ss_dssp CSSSEEECTTSCEEESSCTTBCCSSSTTTTTSEEEEEESSCCSSSCC
T ss_pred CcceEEECCCCEEEEccCccccccccCCcCCCeEEEEEecCCCCCCC
Confidence 456666677776543222 2557899999999777666
No 178
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=22.81 E-value=48 Score=23.01 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=16.0
Q ss_pred cCCceeeEEecCCCCCCCCc
Q psy17151 22 SRPLLGMAIEGGANTKHPLP 41 (86)
Q Consensus 22 ~~~~LGIAIEGGaNTRqPLP 41 (86)
+...+||+.+|+-+...|=+
T Consensus 107 N~~SiGI~~iG~f~~~~pt~ 126 (176)
T 3ep1_A 107 DSHSIGVAVIGDFGKKEPSQ 126 (176)
T ss_dssp CTTEEEEEESSCCSSSCCCH
T ss_pred CCCeEEEEEECCCCCCCChH
Confidence 56789999999988776643
No 179
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=22.57 E-value=1e+02 Score=19.57 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=40.1
Q ss_pred ceEEEEeccCCceeeEEecCCCCCCCCceEEEEcCCCceeccCCCCCceee-----------ehhhhhhhhhhc
Q psy17151 14 QLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPTPYHF-----------TYRELKSDIRSS 76 (86)
Q Consensus 14 nl~i~V~K~~~~LGIAIEGGaNTRqPLPRIitIq~gGsA~~cgqLkv~~~~-----------~~~~~~~~~~~~ 76 (86)
...|++.|...=||+-|.++.. -.+|..|-+ +..|+.|+.|-.. ++.|+.+-|+++
T Consensus 13 ~~~V~L~Kg~~G~GFsI~~~~~----g~~V~~I~~---~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~ 79 (113)
T 3soe_A 13 LVTIPLIKGPKGFGFAIADSPT----GQKVKMILD---SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQF 79 (113)
T ss_dssp EEEEEEECBTTBSSEEEEEETT----EEEEEEESC---GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred EEEEEEEECCCcccEEEeCCCC----CcEEEEecC---hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4678999999999999976532 123667766 2578999988543 556777777764
No 180
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=21.72 E-value=24 Score=23.20 Aligned_cols=9 Identities=56% Similarity=1.224 Sum_probs=7.9
Q ss_pred CCceEEEEc
Q psy17151 39 PLPRIINIH 47 (86)
Q Consensus 39 PLPRIitIq 47 (86)
-||||++++
T Consensus 101 ~LpRiv~~~ 109 (147)
T 2rjz_A 101 SLPRIVTLH 109 (147)
T ss_dssp TSSSCEEEE
T ss_pred cCCcEEEEe
Confidence 589999987
No 181
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=21.51 E-value=44 Score=27.20 Aligned_cols=18 Identities=28% Similarity=0.440 Sum_probs=15.1
Q ss_pred CCCCCCceEEEEcCCCce
Q psy17151 35 NTKHPLPRIINIHDKLKI 52 (86)
Q Consensus 35 NTRqPLPRIitIq~gGsA 52 (86)
..|.|+||+|..+.||+-
T Consensus 703 ~~R~p~Pr~i~~~~~~sq 720 (768)
T 1m2o_A 703 VDRFPLPRFIDTEAGGSQ 720 (768)
T ss_dssp HTCSSCCEEEEEETTCGG
T ss_pred hcCCCCceEEEECCCCcH
Confidence 359999999999988863
No 182
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=20.57 E-value=28 Score=21.49 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=11.7
Q ss_pred cccceEEEEeccCC
Q psy17151 11 VQGQLRITVKKSRP 24 (86)
Q Consensus 11 ~~Gnl~i~V~K~~~ 24 (86)
.+|-|+|++.|...
T Consensus 104 ~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 104 ENGVLTIRIPIAGT 117 (123)
T ss_dssp ETTEEEEEEEGGGE
T ss_pred cCCEEEEEEEcCCC
Confidence 47999999999765
Done!