BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy17151
MKLSNVVISEVQGQLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHDKLKISSMSQIPT
PYHFTYRELKSDIRSSRATQDNSEEV

High Scoring Gene Products

Symbol, full name Information P value
dysc
dyschronic
protein from Drosophila melanogaster 4.3e-11
LOC100520475
Uncharacterized protein
protein from Sus scrofa 6.9e-05
LOC533033
Uncharacterized protein
protein from Bos taurus 0.00013
DFNB31
Whirlin
protein from Homo sapiens 0.00016
DFNB31
Uncharacterized protein
protein from Canis lupus familiaris 0.00017
Dfnb31
deafness, autosomal recessive 31
gene from Rattus norvegicus 0.00027
Whrn
whirlin
protein from Mus musculus 0.00034

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17151
        (86 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0264006 - symbol:dysc "dyschronic" species:7227 "D...   166  4.3e-11   1
UNIPROTKB|F1NVH8 - symbol:F1NVH8 "Uncharacterized protein...   108  5.4e-05   1
UNIPROTKB|F1SMK0 - symbol:DFNB31 "Uncharacterized protein...   104  6.9e-05   1
UNIPROTKB|E1B914 - symbol:LOC533033 "Uncharacterized prot...   105  0.00013   1
UNIPROTKB|Q9P202 - symbol:DFNB31 "Whirlin" species:9606 "...   104  0.00016   1
UNIPROTKB|E2R2H6 - symbol:DFNB31 "Uncharacterized protein...   104  0.00017   1
RGD|631330 - symbol:Dfnb31 "deafness, autosomal recessive...   102  0.00027   1
MGI|MGI:2682003 - symbol:Whrn "whirlin" species:10090 "Mu...   101  0.00034   1


>FB|FBgn0264006 [details] [associations]
            symbol:dysc "dyschronic" species:7227 "Drosophila
            melanogaster" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0046716 "muscle
            cell homeostasis" evidence=IGI;IMP] [GO:0042052 "rhabdomere
            development" evidence=IMP] [GO:0072499 "photoreceptor cell axon
            guidance" evidence=IMP] [GO:0045475 "locomotor rhythm"
            evidence=IMP] [GO:0032414 "positive regulation of ion transmembrane
            transporter activity" evidence=IMP] Pfam:PF00595 InterPro:IPR001478
            PROSITE:PS50106 SMART:SM00228 EMBL:AE014296 GO:GO:0046716
            GO:GO:0045475 SUPFAM:SSF50156 GO:GO:0042052 GO:GO:0072499
            GO:GO:0032414 GeneTree:ENSGT00530000063178 UniGene:Dm.15309
            GeneID:39533 KEGG:dme:Dmel_CG34400 FlyBase:FBgn0264006
            GenomeRNAi:39533 NextBio:814147 RefSeq:NP_648668.3
            ProteinModelPortal:Q9VU98 SMR:Q9VU98 EnsemblMetazoa:FBtr0330414
            UCSC:CG34400-RC InParanoid:Q9VU98 OMA:ITILFEL PhylomeDB:Q9VU98
            ArrayExpress:Q9VU98 Bgee:Q9VU98 Uniprot:Q9VU98
        Length = 990

 Score = 166 (63.5 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 30/42 (71%), Positives = 38/42 (90%)

Query:     7 VISEVQGQLRITVKKSRPLLGMAIEGGANTKHPLPRIINIHD 48
             V+ + +G L ITVKK++P+LG+AIEGGANTKHPLPRIINIH+
Sbjct:   877 VVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHE 918


>UNIPROTKB|F1NVH8 [details] [associations]
            symbol:F1NVH8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001895 "retina homeostasis" evidence=IEA]
            [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005884 "actin filament"
            evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0032420
            "stereocilium" evidence=IEA] [GO:0050953 "sensory perception of
            light stimulus" evidence=IEA] [GO:0060122 "inner ear receptor
            stereocilium organization" evidence=IEA] Pfam:PF00595
            InterPro:IPR001478 PROSITE:PS50106 SMART:SM00228 GO:GO:0005737
            GO:GO:0005929 GO:GO:0005884 SUPFAM:SSF50156 GO:GO:0032420
            GO:GO:0002142 GeneTree:ENSGT00530000063178 OMA:NILHDEA
            EMBL:AADN02026885 EMBL:AADN02026886 EMBL:AADN02026887
            EMBL:AADN02026888 IPI:IPI00582561 Ensembl:ENSGALT00000010203
            Uniprot:F1NVH8
        Length = 824

 Score = 108 (43.1 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 21/30 (70%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             I V KS P LG+AIEGGANT+ PLPRI+ I
Sbjct:   734 IRVSKSAPTLGIAIEGGANTRQPLPRIVTI 763


>UNIPROTKB|F1SMK0 [details] [associations]
            symbol:DFNB31 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060122 "inner ear receptor stereocilium organization"
            evidence=IEA] [GO:0050953 "sensory perception of light stimulus"
            evidence=IEA] [GO:0032420 "stereocilium" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0005929 "cilium"
            evidence=IEA] [GO:0005884 "actin filament" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0002142 "stereocilia
            ankle link complex" evidence=IEA] [GO:0001895 "retina homeostasis"
            evidence=IEA] Pfam:PF00595 InterPro:IPR001478 PROSITE:PS50106
            SMART:SM00228 GO:GO:0005737 GO:GO:0005929 GO:GO:0005884
            GO:GO:0007605 SUPFAM:SSF50156 GO:GO:0001895 GO:GO:0060122
            GO:GO:0032420 GO:GO:0050953 GO:GO:0002142
            GeneTree:ENSGT00530000063178 EMBL:CU618340
            Ensembl:ENSSSCT00000006036 OMA:ISSATHR Uniprot:F1SMK0
        Length = 467

 Score = 104 (41.7 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             + VKKS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   377 VRVKKSAATLGIAIEGGANTRQPLPRIVTI 406


>UNIPROTKB|E1B914 [details] [associations]
            symbol:LOC533033 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0060122 "inner ear receptor stereocilium
            organization" evidence=IEA] [GO:0050953 "sensory perception of
            light stimulus" evidence=IEA] [GO:0032420 "stereocilium"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0005884 "actin
            filament" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
            [GO:0001895 "retina homeostasis" evidence=IEA] Pfam:PF00595
            InterPro:IPR001478 PROSITE:PS50106 SMART:SM00228 GO:GO:0005737
            GO:GO:0005929 GO:GO:0005884 GO:GO:0007605 SUPFAM:SSF50156
            GO:GO:0001895 GO:GO:0060122 GO:GO:0032420 GO:GO:0050953
            GO:GO:0002142 GeneTree:ENSGT00530000063178 OMA:NILHDEA
            EMBL:DAAA02024584 IPI:IPI00707793 Ensembl:ENSBTAT00000013333
            Uniprot:E1B914
        Length = 918

 Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/30 (70%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             I VKKS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   828 IRVKKSAATLGIAIEGGANTRQPLPRIVTI 857


>UNIPROTKB|Q9P202 [details] [associations]
            symbol:DFNB31 "Whirlin" species:9606 "Homo sapiens"
            [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
            [GO:0005884 "actin filament" evidence=IEA] [GO:0005929 "cilium"
            evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032420
            "stereocilium" evidence=ISS] [GO:0060122 "inner ear receptor
            stereocilium organization" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0050953 "sensory perception of light stimulus" evidence=IMP]
            [GO:0001895 "retina homeostasis" evidence=IMP] [GO:0007605 "sensory
            perception of sound" evidence=IMP] Pfam:PF00595 InterPro:IPR001478
            PROSITE:PS50106 SMART:SM00228 GO:GO:0005737 GO:GO:0043198
            GO:GO:0030424 GO:GO:0043025 EMBL:CH471090 GO:GO:0045202
            GO:GO:0005884 GO:GO:0030426 GO:GO:0007605 SUPFAM:SSF50156
            GO:GO:0001917 GO:GO:0001895 GO:GO:0060122 GO:GO:0032391
            Orphanet:90636 GO:GO:0032420 GO:GO:0050953 Orphanet:231178
            GO:GO:0002142 EMBL:AB040959 EMBL:AK022854 EMBL:AK056190
            EMBL:AL110228 EMBL:AL138895 EMBL:BC142614 EMBL:BC142684
            IPI:IPI00292748 IPI:IPI00335260 IPI:IPI00382416 IPI:IPI00386465
            PIR:T14765 RefSeq:NP_001077354.2 RefSeq:NP_001166896.1
            RefSeq:NP_056219.3 UniGene:Hs.93836 PDB:1UEZ PDB:1UF1 PDB:1UFX
            PDBsum:1UEZ PDBsum:1UF1 PDBsum:1UFX ProteinModelPortal:Q9P202
            SMR:Q9P202 IntAct:Q9P202 STRING:Q9P202 PhosphoSite:Q9P202
            DMDM:296453079 PaxDb:Q9P202 PRIDE:Q9P202 Ensembl:ENST00000265134
            Ensembl:ENST00000362057 Ensembl:ENST00000374057
            Ensembl:ENST00000374059 GeneID:25861 KEGG:hsa:25861 UCSC:uc004bix.3
            UCSC:uc004biy.4 UCSC:uc004bjb.3 CTD:25861 GeneCards:GC09M117164
            HGNC:HGNC:16361 HPA:CAB033194 HPA:HPA002386 HPA:HPA002480
            MIM:607084 MIM:607928 MIM:611383 neXtProt:NX_Q9P202
            PharmGKB:PA27297 eggNOG:NOG291372 HOVERGEN:HBG056634
            InParanoid:Q9P202 OMA:NILHDEA OrthoDB:EOG4PC9RS
            EvolutionaryTrace:Q9P202 GenomeRNAi:25861 NextBio:47225 Bgee:Q9P202
            CleanEx:HS_DFNB31 Genevestigator:Q9P202 GermOnline:ENSG00000095397
            Uniprot:Q9P202
        Length = 907

 Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             + VKKS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   817 VRVKKSAATLGIAIEGGANTRQPLPRIVTI 846


>UNIPROTKB|E2R2H6 [details] [associations]
            symbol:DFNB31 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060122 "inner ear receptor stereocilium
            organization" evidence=IEA] [GO:0050953 "sensory perception of
            light stimulus" evidence=IEA] [GO:0032420 "stereocilium"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0005884 "actin
            filament" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
            [GO:0001895 "retina homeostasis" evidence=IEA] Pfam:PF00595
            InterPro:IPR001478 PROSITE:PS50106 SMART:SM00228 GO:GO:0005737
            GO:GO:0005929 GO:GO:0005884 GO:GO:0007605 SUPFAM:SSF50156
            GO:GO:0001895 GO:GO:0060122 GO:GO:0032420 GO:GO:0050953
            GO:GO:0002142 CTD:25861 RefSeq:XP_855414.2
            ProteinModelPortal:E2R2H6 Ensembl:ENSCAFT00000005356 GeneID:612588
            KEGG:cfa:612588 NextBio:20898119 Uniprot:E2R2H6
        Length = 927

 Score = 104 (41.7 bits), Expect = 0.00017, P = 0.00017
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             + VKKS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   837 VRVKKSAATLGIAIEGGANTRQPLPRIVTI 866


>RGD|631330 [details] [associations]
            symbol:Dfnb31 "deafness, autosomal recessive 31" species:10116
            "Rattus norvegicus" [GO:0001895 "retina homeostasis"
            evidence=IEA;ISO] [GO:0002142 "stereocilia ankle link complex"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
            [GO:0005884 "actin filament" evidence=IEA;ISO] [GO:0005929 "cilium"
            evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
            evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0019904
            "protein domain specific binding" evidence=IPI] [GO:0030424 "axon"
            evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0030426
            "growth cone" evidence=IEA] [GO:0032420 "stereocilium"
            evidence=IEA;ISO;ISS;IDA] [GO:0032421 "stereocilium bundle"
            evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
            [GO:0043198 "dendritic shaft" evidence=IDA] [GO:0045202 "synapse"
            evidence=IDA] [GO:0050953 "sensory perception of light stimulus"
            evidence=IEA;ISO] [GO:0060122 "inner ear receptor stereocilium
            organization" evidence=IEA;ISO;ISS] [GO:0001917 "photoreceptor
            inner segment" evidence=IDA] [GO:0032391 "photoreceptor connecting
            cilium" evidence=IDA] Pfam:PF00595 InterPro:IPR001478
            PROSITE:PS50106 SMART:SM00228 RGD:631330 GO:GO:0005737
            GO:GO:0016020 GO:GO:0043198 GO:GO:0030424 GO:GO:0043025
            GO:GO:0005929 GO:GO:0045202 GO:GO:0005884 GO:GO:0030426
            GO:GO:0007605 SUPFAM:SSF50156 GO:GO:0001895 GO:GO:0060122
            GO:GO:0032420 GO:GO:0050953 GO:GO:0002142 CTD:25861
            eggNOG:NOG291372 HOVERGEN:HBG056634 OrthoDB:EOG4PC9RS EMBL:AY227205
            IPI:IPI00327507 RefSeq:NP_851602.1 UniGene:Rn.231801
            ProteinModelPortal:Q810W9 SMR:Q810W9 MINT:MINT-1895259
            STRING:Q810W9 PhosphoSite:Q810W9 PRIDE:Q810W9 GeneID:313255
            KEGG:rno:313255 UCSC:RGD:631330 HOGENOM:HOG000139689
            InParanoid:Q810W9 NextBio:665920 ArrayExpress:Q810W9
            Genevestigator:Q810W9 GermOnline:ENSRNOG00000001700 Uniprot:Q810W9
        Length = 920

 Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             I V+KS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   830 IRVRKSAATLGIAIEGGANTRQPLPRIVTI 859


>MGI|MGI:2682003 [details] [associations]
            symbol:Whrn "whirlin" species:10090 "Mus musculus"
            [GO:0001895 "retina homeostasis" evidence=ISO] [GO:0001917
            "photoreceptor inner segment" evidence=ISO] [GO:0002142
            "stereocilia ankle link complex" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005581 "collagen" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005884 "actin filament"
            evidence=IDA] [GO:0005929 "cilium" evidence=IDA] [GO:0007605
            "sensory perception of sound" evidence=ISO;IMP] [GO:0016020
            "membrane" evidence=ISO] [GO:0019904 "protein domain specific
            binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030425
            "dendrite" evidence=ISO] [GO:0032391 "photoreceptor connecting
            cilium" evidence=ISO] [GO:0032420 "stereocilium" evidence=ISO;IDA]
            [GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
            projection" evidence=IEA] [GO:0043025 "neuronal cell body"
            evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
            [GO:0045202 "synapse" evidence=ISO] [GO:0050953 "sensory perception
            of light stimulus" evidence=ISO] [GO:0060122 "inner ear receptor
            stereocilium organization" evidence=IMP] Pfam:PF00595
            InterPro:IPR001478 PROSITE:PS50106 SMART:SM00228 MGI:MGI:2682003
            GO:GO:0005737 GO:GO:0043198 GO:GO:0030424 GO:GO:0043025
            GO:GO:0005929 GO:GO:0045202 GO:GO:0005884 GO:GO:0030426
            GO:GO:0007605 SUPFAM:SSF50156 GO:GO:0001917 GO:GO:0001895
            EMBL:AL683828 GO:GO:0060122 GO:GO:0032391 GO:GO:0032420
            GO:GO:0050953 GO:GO:0032421 GO:GO:0002142
            GeneTree:ENSGT00530000063178 eggNOG:NOG291372 HOVERGEN:HBG056634
            OMA:NILHDEA EMBL:AY739114 EMBL:AY739115 EMBL:AY739116 EMBL:AY739117
            EMBL:AY739118 EMBL:AY739119 EMBL:AY739120 EMBL:AY739121
            EMBL:AY739122 EMBL:HQ148552 EMBL:HQ148553 EMBL:AK157955
            EMBL:AK122523 IPI:IPI00330536 IPI:IPI00474346 IPI:IPI00551081
            IPI:IPI00551196 IPI:IPI00551262 IPI:IPI00551322 IPI:IPI00551333
            IPI:IPI00551381 IPI:IPI00551441 IPI:IPI00775934
            RefSeq:NP_001008791.1 RefSeq:NP_001008792.1 RefSeq:NP_001008793.1
            RefSeq:NP_001008794.1 RefSeq:NP_001008795.1 RefSeq:NP_001008796.1
            RefSeq:NP_001008797.1 RefSeq:NP_001008798.1 RefSeq:NP_082916.1
            UniGene:Mm.300397 ProteinModelPortal:Q80VW5 SMR:Q80VW5
            MINT:MINT-1895268 STRING:Q80VW5 PhosphoSite:Q80VW5 PRIDE:Q80VW5
            Ensembl:ENSMUST00000063650 Ensembl:ENSMUST00000063672
            Ensembl:ENSMUST00000084510 Ensembl:ENSMUST00000095037
            Ensembl:ENSMUST00000095038 Ensembl:ENSMUST00000102867
            Ensembl:ENSMUST00000107393 Ensembl:ENSMUST00000119294 GeneID:73750
            KEGG:mmu:73750 UCSC:uc008tgf.1 UCSC:uc008tgg.1 UCSC:uc008tgh.1
            UCSC:uc008tgi.1 UCSC:uc008tgj.1 UCSC:uc008tgk.1 UCSC:uc008tgl.1
            UCSC:uc008tgm.1 UCSC:uc008tgn.1 UCSC:uc008tgp.1 CTD:73750
            InParanoid:Q80VW5 ChiTaRS:DFNB31 NextBio:338987 Bgee:Q80VW5
            CleanEx:MM_WHRN Genevestigator:Q80VW5 GermOnline:ENSMUSG00000039137
            Uniprot:Q80VW5
        Length = 918

 Score = 101 (40.6 bits), Expect = 0.00034, P = 0.00034
 Identities = 19/30 (63%), Positives = 24/30 (80%)

Query:    17 ITVKKSRPLLGMAIEGGANTKHPLPRIINI 46
             + V+KS   LG+AIEGGANT+ PLPRI+ I
Sbjct:   828 VRVRKSAATLGIAIEGGANTRQPLPRIVTI 857


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.354    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 23  0.47    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  458 (49 KB)
  Total size of DFA:  82 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.94u 0.24s 10.18t   Elapsed:  00:00:00
  Total cpu time:  9.94u 0.24s 10.18t   Elapsed:  00:00:00
  Start:  Thu Aug 15 13:48:09 2013   End:  Thu Aug 15 13:48:09 2013

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