Your job contains 1 sequence.
>psy17165
MRTGIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT
RIGVGGAAGAASRITGAMGKGIAALTFDKEYQRRRRLQTARQATLHEDLAASGKGLVLGF
VQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17165
(151 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033194 - symbol:Vps13 "Vacuolar protein sorting 1... 271 2.8e-31 2
UNIPROTKB|E1C549 - symbol:E1C549 "Uncharacterized protein... 234 1.5e-26 2
MGI|MGI:2444207 - symbol:Vps13c "vacuolar protein sorting... 229 1.9e-26 2
UNIPROTKB|Q96RL7 - symbol:VPS13A "Vacuolar protein sortin... 229 5.7e-26 2
UNIPROTKB|F1SIL5 - symbol:VPS13A "Uncharacterized protein... 226 1.5e-25 2
UNIPROTKB|D4A899 - symbol:Vps13a "Protein Vps13a" species... 226 7.5e-25 2
MGI|MGI:2444304 - symbol:Vps13a "vacuolar protein sorting... 226 8.0e-25 2
WB|WBGene00011629 - symbol:T08G11.1 species:6239 "Caenorh... 225 3.9e-23 2
RGD|1311340 - symbol:Vps13a "vacuolar protein sorting 13 ... 132 1.0e-15 2
DICTYBASE|DDB_G0286545 - symbol:vps13D "vacuolar protein ... 146 1.8e-12 2
ASPGD|ASPL0000032755 - symbol:AN5579 species:162425 "Emer... 154 3.4e-12 2
DICTYBASE|DDB_G0286725 - symbol:vps13A "vacuolar protein ... 171 3.8e-12 2
CGD|CAL0001755 - symbol:VPS13 species:5476 "Candida albic... 139 4.1e-09 2
UNIPROTKB|Q59Q73 - symbol:VPS13 "Putative uncharacterized... 139 4.1e-09 2
UNIPROTKB|G4N6L6 - symbol:MGG_06537 "Vacuolar protein sor... 149 1.1e-08 1
DICTYBASE|DDB_G0267422 - symbol:tipC species:44689 "Dicty... 116 1.2e-07 3
DICTYBASE|DDB_G0274917 - symbol:vps13B "Vacuolar protein ... 118 4.5e-07 2
POMBASE|SPBC21C3.01c - symbol:vps13a "chorein homolog (pr... 115 4.6e-07 2
SGD|S000003963 - symbol:VPS13 "Protein of unknown functio... 108 3.3e-06 2
DICTYBASE|DDB_G0287055 - symbol:vps13F "vacuolar protein ... 105 1.6e-05 2
DICTYBASE|DDB_G0268886 - symbol:vps13E "vacuolar protein ... 119 2.2e-05 1
FB|FBgn0052113 - symbol:CG32113 species:7227 "Drosophila ... 106 0.00049 1
>FB|FBgn0033194 [details] [associations]
symbol:Vps13 "Vacuolar protein sorting 13" species:7227
"Drosophila melanogaster" [GO:0006623 "protein targeting to
vacuole" evidence=ISS] InterPro:IPR009543 EMBL:AE013599
GO:GO:0008104 InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 RefSeq:NP_610299.2 UniGene:Dm.18802
PaxDb:A1Z713 EnsemblMetazoa:FBtr0088910 EnsemblMetazoa:FBtr0310024
GeneID:35693 KEGG:dme:Dmel_CG2093 UCSC:CG2093-RA CTD:35693
FlyBase:FBgn0033194 InParanoid:A1Z713 OMA:HILEPIN OrthoDB:EOG46HDRG
PhylomeDB:A1Z713 GenomeRNAi:35693 NextBio:794764 Bgee:A1Z713
Uniprot:A1Z713
Length = 3321
Score = 271 (100.5 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 55/87 (63%), Positives = 65/87 (74%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGGAAGA S+ITGAMGKG+AALTFD++Y HE LA S KGLV+GFV
Sbjct: 3045 VGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVD 3104
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGK 149
GV+GVVTKP+ GA+D+GVEGF KG+GK
Sbjct: 3105 GVTGVVTKPVTGARDNGVEGFFKGLGK 3131
Score = 125 (49.1 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSITRIG 63
G+QR+LL TE++++ ++ + + Q I L +H IG+S+++NE G ++LY+ +T G
Sbjct: 2637 GLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIGLSVINNETGLDILYLGVTSSG 2696
Query: 64 V 64
+
Sbjct: 2697 I 2697
Score = 58 (25.5 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGA-KDDG--VEGFVKGV 147
D+ + GLV+G +GV + +P +GA + G EG V GV
Sbjct: 2995 DVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGV 3037
Score = 40 (19.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 114 KGLVLGFVQGVSGVVTKPIEGAKD 137
+G G +G G+V +P G D
Sbjct: 3123 EGFFKGLGKGAIGLVARPTAGVVD 3146
Score = 33 (16.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 10 LLTEDDAVFTDVRASG 25
++ EDD F +VR G
Sbjct: 1540 IIKEDDT-FAEVRVRG 1554
>UNIPROTKB|E1C549 [details] [associations]
symbol:E1C549 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] InterPro:IPR009543
GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333
Pfam:PF12624 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 EMBL:AADN02059630 EMBL:AADN02059631
EMBL:AADN02059632 EMBL:AADN02059633 EMBL:AADN02059634
EMBL:AADN02059635 EMBL:AADN02059636 EMBL:AADN02059637
EMBL:AADN02059638 EMBL:AADN02059639 EMBL:AADN02059640
EMBL:AADN02059641 IPI:IPI00603402 Ensembl:ENSGALT00000024483
Uniprot:E1C549
Length = 3008
Score = 234 (87.4 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 47/89 (52%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGG AGAASRITGAM KG+AA+T D++Y E + GKGLV GFV
Sbjct: 2896 VGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGLVSGFVS 2955
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++G+VTKPI GA+ +G GF KGVGK +
Sbjct: 2956 GITGIVTKPIRGAQKEGAAGFFKGVGKGL 2984
Score = 116 (45.9 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L+TED VF S EL +QEI LS+ +G+SL++N E+ Y+ IT
Sbjct: 2476 GLQRIVLITEDKNVFKLAYQSVQAELAEQEIILSLQDVGISLVNNYTRQEVSYIGIT 2532
Score = 52 (23.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + G + G +GV +P +GA G E F++G+
Sbjct: 2846 DVLGNPFGFIRGLSEGVEAFFYEPYQGAIQ-GPEEFIEGM 2884
Score = 43 (20.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 ITRIGVGGAAGAASRITGAMGKGI 82
ITR G G +G S ITG + K I
Sbjct: 2942 ITRGGKGLVSGFVSGITGIVTKPI 2965
>MGI|MGI:2444207 [details] [associations]
symbol:Vps13c "vacuolar protein sorting 13C (yeast)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009543
MGI:MGI:2444207 GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854
Pfam:PF09333 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 HOVERGEN:HBG079736
GeneTree:ENSGT00410000025397 HOGENOM:HOG000218634 EMBL:AC156799
EMBL:AK030931 EMBL:AK045749 EMBL:AK048766 EMBL:AK049557
EMBL:AK129486 IPI:IPI00551411 IPI:IPI00661059 IPI:IPI00761666
RefSeq:NP_796158.2 UniGene:Mm.241454 ProteinModelPortal:Q8BX70
PhosphoSite:Q8BX70 PaxDb:Q8BX70 PRIDE:Q8BX70
Ensembl:ENSMUST00000077879 GeneID:320528 KEGG:mmu:320528 CTD:54832
InParanoid:Q8BX70 OMA:KAYDKFD OrthoDB:EOG4NKBTN NextBio:396907
Bgee:Q8BX70 CleanEx:MM_VPS13C Genevestigator:Q8BX70
GermOnline:ENSMUSG00000035284 Uniprot:Q8BX70
Length = 3748
Score = 229 (85.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 46/89 (51%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHED-LAASGKGLVLGFVQ 122
VGGAAG SRITG++GKG+AA+T DKEY D LA GKG + G V
Sbjct: 3466 VGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGFLRGVVG 3525
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
GV+G++TKP+EGAK +G GF KG+GK +
Sbjct: 3526 GVTGIITKPVEGAKKEGAAGFFKGIGKGL 3554
Score = 122 (48.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSITRIG 63
G QR+LL T+D A+ + + E D E++LS+H +G+SL++NE E+ Y+ IT G
Sbjct: 3052 GRQRVLLFTDDVALVSKALQAEEMEQADHEVALSLHSLGLSLVNNENKQEVSYVGITSSG 3111
Query: 64 V 64
V
Sbjct: 3112 V 3112
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + GL+ G +GV + +P +GA G E F +G+
Sbjct: 3416 DVLGNPFGLIRGLSEGVEALFYEPFQGAVQ-GPEEFAEGL 3454
Score = 36 (17.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 107 EDLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGV 140
E L + LV V G +GVV++ I G+ G+
Sbjct: 3452 EGLVIGVRSLVGHTVGGAAGVVSR-ITGSVGKGL 3484
Score = 34 (17.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGI 82
S+ R G G G +TG + K +
Sbjct: 3511 SLARGGKGFLRGVVGGVTGIITKPV 3535
>UNIPROTKB|Q96RL7 [details] [associations]
symbol:VPS13A "Vacuolar protein sorting-associated protein
13A" species:9606 "Homo sapiens" [GO:0008219 "cell death"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0005622 "intracellular" evidence=NAS] [GO:0006895
"Golgi to endosome transport" evidence=NAS] [GO:0008104 "protein
localization" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] PROSITE:PS50005 PROSITE:PS50293 InterPro:IPR009543
GO:GO:0007399 GO:GO:0008104 GO:GO:0015031 GO:GO:0008219
GO:GO:0007626 GO:GO:0005622 GO:GO:0035176 GO:GO:0006895
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
EMBL:AF337532 EMBL:AB054005 EMBL:AJ608769 EMBL:AJ626859
EMBL:AL158159 EMBL:AL353710 EMBL:AL359204 EMBL:AB023203
EMBL:BC020576 EMBL:BC041852 EMBL:AK022967 IPI:IPI00478586
IPI:IPI00604660 IPI:IPI00746613 IPI:IPI00873376
RefSeq:NP_001018047.1 RefSeq:NP_001018048.1 RefSeq:NP_056001.1
RefSeq:NP_150648.2 UniGene:Hs.459790 UniGene:Hs.662256
ProteinModelPortal:Q96RL7 IntAct:Q96RL7 STRING:Q96RL7
PhosphoSite:Q96RL7 DMDM:71152975 PaxDb:Q96RL7 PRIDE:Q96RL7
Ensembl:ENST00000357409 Ensembl:ENST00000360280
Ensembl:ENST00000376634 Ensembl:ENST00000376636 GeneID:23230
KEGG:hsa:23230 UCSC:uc004akp.4 UCSC:uc004akq.4 UCSC:uc004akr.3
UCSC:uc004aks.3 CTD:23230 GeneCards:GC09P079793 HGNC:HGNC:1908
HPA:HPA021652 HPA:HPA021662 MIM:200150 MIM:605978
neXtProt:NX_Q96RL7 Orphanet:2388 PharmGKB:PA26444
HOVERGEN:HBG079736 OMA:MPKFKIF OrthoDB:EOG45QHC8 GenomeRNAi:23230
NextBio:44845 ArrayExpress:Q96RL7 Bgee:Q96RL7 Genevestigator:Q96RL7
GermOnline:ENSG00000197969 Uniprot:Q96RL7
Length = 3174
Score = 229 (85.7 bits), Expect = 5.7e-26, Sum P(2) = 5.7e-26
Identities = 46/89 (51%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGG AGAAS+ITGAM KG+AA+T D++Y E + GKGLV GFV
Sbjct: 2914 VGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVS 2973
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++G+VTKPI+GA+ G GF KGVGK +
Sbjct: 2974 GITGIVTKPIKGAQKGGAAGFFKGVGKGL 3002
Score = 116 (45.9 bits), Expect = 5.7e-26, Sum P(2) = 5.7e-26
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L TED VF S EL +QEI++++ +G+SL++N E+ Y+ IT
Sbjct: 2494 GLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGIT 2550
Score = 55 (24.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + GL+ F +GV +P +GA G E FV+G+
Sbjct: 2864 DVLGNPFGLIREFSEGVEAFFYEPYQGAIQ-GPEEFVEGM 2902
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 ITRIGVGGAAGAASRITGAMGKGI 82
ITR G G +G S ITG + K I
Sbjct: 2960 ITRGGKGLVSGFVSGITGIVTKPI 2983
>UNIPROTKB|F1SIL5 [details] [associations]
symbol:VPS13A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035176 "social behavior" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR009543 GO:GO:0007399
GO:GO:0008104 GO:GO:0007626 GO:GO:0035176 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 OMA:MPKFKIF
GeneTree:ENSGT00410000025397 EMBL:CU693389 EMBL:CU074391
Ensembl:ENSSSCT00000005817 Uniprot:F1SIL5
Length = 3172
Score = 226 (84.6 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGG AGAAS+IT AM KG+AA+T D++Y E + GKGLV GFV
Sbjct: 2911 VGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVS 2970
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++G+VTKPI+GA+ +G GF KGVGK +
Sbjct: 2971 GITGIVTKPIKGAQKEGAAGFFKGVGKGL 2999
Score = 115 (45.5 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L TED VF S EL +QE+ L++ +G+SL++N E+ Y+ IT
Sbjct: 2491 GLQRIILFTEDPRVFKVTYESEKAELAEQEVVLALQDVGISLVNNYTKQEVAYIGIT 2547
Score = 44 (20.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 115 GLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKA 150
G G +G+ G VT+P G D F +G+ +A
Sbjct: 2990 GFFKGVGKGLVGAVTRPTGGIIDMASSTF-QGIKRA 3024
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 ITRIGVGGAAGAASRITGAMGKGI 82
ITR G G +G S ITG + K I
Sbjct: 2957 ITRGGKGLVSGFVSGITGIVTKPI 2980
>UNIPROTKB|D4A899 [details] [associations]
symbol:Vps13a "Protein Vps13a" species:10116 "Rattus
norvegicus" [GO:0007399 "nervous system development" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR009543 RGD:1311340
GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333
Pfam:PF12624 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 IPI:IPI00476312
Ensembl:ENSRNOT00000014800 ArrayExpress:D4A899 Uniprot:D4A899
Length = 3062
Score = 226 (84.6 bits), Expect = 7.5e-25, Sum P(2) = 7.5e-25
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGG AGAAS+IT AM KG+AA+T D++Y E + GKGLV GFV
Sbjct: 2907 VGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVS 2966
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++G+VTKPI+GA+ +G GF KGVGK +
Sbjct: 2967 GITGIVTKPIKGAQKEGAAGFFKGVGKGL 2995
Score = 108 (43.1 bits), Expect = 7.5e-25, Sum P(2) = 7.5e-25
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L TED VF S EL + E+ L++ +G+SL++N E+ Y+ IT
Sbjct: 2487 GLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVNNYTKQEVAYIGIT 2543
Score = 55 (24.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + GL+ F +GV +P +GA G E FV+G+
Sbjct: 2857 DVLGNPFGLIREFSEGVEAFFYEPYQGAIQ-GPEEFVEGM 2895
Score = 43 (20.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 ITRIGVGGAAGAASRITGAMGKGI 82
ITR G G +G S ITG + K I
Sbjct: 2953 ITRGGKGLVSGFVSGITGIVTKPI 2976
Score = 34 (17.0 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 14 DDAVFTDVR 22
D A FTDVR
Sbjct: 1407 DQASFTDVR 1415
>MGI|MGI:2444304 [details] [associations]
symbol:Vps13a "vacuolar protein sorting 13A (yeast)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006810 "transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031045 "dense core granule" evidence=IDA]
[GO:0035176 "social behavior" evidence=IMP] PROSITE:PS50005
PROSITE:PS50293 InterPro:IPR009543 MGI:MGI:2444304 GO:GO:0007399
GO:GO:0015031 GO:GO:0007626 GO:GO:0035176 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 GO:GO:0031045
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
CTD:23230 HOVERGEN:HBG079736 OMA:MPKFKIF OrthoDB:EOG45QHC8
EMBL:AB115421 EMBL:AK052697 EMBL:AK135983 EMBL:AK142462
EMBL:AK220362 EMBL:BC050055 IPI:IPI00420394 IPI:IPI00762748
RefSeq:NP_766616.2 UniGene:Mm.211963 ProteinModelPortal:Q5H8C4
STRING:Q5H8C4 PhosphoSite:Q5H8C4 PaxDb:Q5H8C4 PRIDE:Q5H8C4
Ensembl:ENSMUST00000068156 GeneID:271564 KEGG:mmu:271564
UCSC:uc008gwv.1 GeneTree:ENSGT00410000025397 HOGENOM:HOG000218634
InParanoid:Q5H8C4 NextBio:393478 Bgee:Q5H8C4 CleanEx:MM_VPS13A
Genevestigator:Q5H8C4 GermOnline:ENSMUSG00000046230 Uniprot:Q5H8C4
Length = 3166
Score = 226 (84.6 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLVLGFVQ 122
VGG AGAAS+IT AM KG+AA+T D++Y E + GKGLV GFV
Sbjct: 2906 VGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVS 2965
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++G+VTKPI+GA+ +G GF KGVGK +
Sbjct: 2966 GITGIVTKPIKGAQKEGAAGFFKGVGKGL 2994
Score = 108 (43.1 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L TED VF S EL + E+ L++ +G+SL++N E+ Y+ IT
Sbjct: 2487 GLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVNNYTKQEVAYIGIT 2543
Score = 55 (24.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + GL+ F +GV +P +GA G E FV+G+
Sbjct: 2856 DVLGNPFGLIREFSEGVEAFFYEPYQGAIQ-GPEEFVEGM 2894
Score = 44 (20.5 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 115 GLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKA 150
G G +G+ G VT+P G D F +G+ +A
Sbjct: 2985 GFFKGVGKGLVGAVTRPTGGIIDMASSTF-QGIKRA 3019
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 ITRIGVGGAAGAASRITGAMGKGI 82
ITR G G +G S ITG + K I
Sbjct: 2952 ITRGGKGLVSGFVSGITGIVTKPI 2975
Score = 43 (20.2 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 116 LVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
L LGFV ++ +VTK E + VE F K V
Sbjct: 2707 LDLGFVYALADLVTKA-EVTEKTEVEHFHKDV 2737
Score = 36 (17.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 DDAVFTDVR 22
D+A FTDVR
Sbjct: 1407 DEASFTDVR 1415
>WB|WBGene00011629 [details] [associations]
symbol:T08G11.1 species:6239 "Caenorhabditis elegans"
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR009543
GO:GO:0008104 EMBL:Z80220 InterPro:IPR026854 Pfam:PF12624
OMA:QQSPNQQ InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 GeneID:172705 KEGG:cel:CELE_T08G11.1
UCSC:T08G11.1b CTD:172705 HOGENOM:HOG000019632 NextBio:876665
PIR:T24692 RefSeq:NP_740900.1 ProteinModelPortal:Q94010
PRIDE:Q94010 EnsemblMetazoa:T08G11.1a.1 EnsemblMetazoa:T08G11.1a.2
WormBase:T08G11.1a InParanoid:Q94010 ArrayExpress:Q94010
Uniprot:Q94010
Length = 3212
Score = 225 (84.3 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 49/89 (55%), Positives = 58/89 (65%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXH-EDLAASGKGLVLGFVQ 122
VGGAAGA RITG +GKG+AALTFD +Y E +A KGL +G V
Sbjct: 2953 VGGAAGAVGRITGTVGKGVAALTFDDDYMKKRQEDLNRKPQSFGEGMARGLKGLGMGVVG 3012
Query: 123 GVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G++GVVTKPIEGAK +G GFVKGVGK +
Sbjct: 3013 GITGVVTKPIEGAKQEGGFGFVKGVGKGL 3041
Score = 93 (37.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G QR+LL T D + S ++ D + +S+ G+S++DN G E++YM+I+
Sbjct: 2538 GRQRVLLFTPDVDIAKAAYGSWETDVVDMQAEISLQGFGLSVVDNIVGREIIYMAIS 2594
Score = 61 (26.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 113 GKGLVLGFVQGVSGVVTKPIEGAKD--DGVEGFVKGV 147
G G V G +G+ GVVT+P+ G D G V+ V
Sbjct: 3030 GFGFVKGVGKGLIGVVTRPVSGVVDFASGTMNSVRAV 3066
Score = 34 (17.0 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 12/55 (21%), Positives = 27/55 (49%)
Query: 21 VRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSITRIGVGGAAGAASRIT 75
V + +YE + ++++R+ ++ +KG E+ I G+ G +S+ T
Sbjct: 2629 VTPNDDYEAMEA-FEVNVNRM---IMKKKKGKEVKLRRIFEKGLWACYGKSSQRT 2679
>RGD|1311340 [details] [associations]
symbol:Vps13a "vacuolar protein sorting 13 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007399 "nervous system development" evidence=ISO]
[GO:0007626 "locomotory behavior" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0031045 "dense core granule"
evidence=ISO] [GO:0035176 "social behavior" evidence=ISO]
InterPro:IPR009543 RGD:1311340 GO:GO:0008104 InterPro:IPR013544
Pfam:PF08333 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
EMBL:AY325251 IPI:IPI00382187 UniGene:Rn.16931 PhosphoSite:Q7TP07
PRIDE:Q7TP07 UCSC:RGD:1311340 eggNOG:NOG133424 ArrayExpress:Q7TP07
Genevestigator:Q7TP07 Uniprot:Q7TP07
Length = 1446
Score = 132 (51.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 38/98 (38%), Positives = 51/98 (52%)
Query: 64 VGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGLV-LGF- 120
VGG AGAAS+IT AM KG+AA+T D++Y E + GKGLV + F
Sbjct: 1250 VGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSVRFP 1309
Query: 121 -----VQG--VSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
+Q +S +GA+ +G GF KGVGK +
Sbjct: 1310 WAYKHMQEWLLSHNCMSKEKGAQKEGAAGFFKGVGKGL 1347
Score = 108 (43.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSIT 60
G+QRI+L TED VF S EL + E+ L++ +G+SL++N E+ Y+ IT
Sbjct: 906 GLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQDVGISLVNNYTKQEVAYIGIT 962
Score = 55 (24.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 DLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGV 147
D+ + GL+ F +GV +P +GA G E FV+G+
Sbjct: 1200 DVLGNPFGLIREFSEGVEAFFYEPYQGAIQ-GPEEFVEGM 1238
>DICTYBASE|DDB_G0286545 [details] [associations]
symbol:vps13D "vacuolar protein sorting-associated
protein 13 family protein" species:44689 "Dictyostelium discoideum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] PROSITE:PS50005 PROSITE:PS50293
InterPro:IPR009543 dictyBase:DDB_G0286545 GO:GO:0005794
GenomeReviews:CM000153_GR GO:GO:0015031 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 EMBL:AAFI02000088
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
RefSeq:XP_637675.1 EnsemblProtists:DDB0234205 GeneID:8625668
KEGG:ddi:DDB_G0286545 InParanoid:Q54LN2 OMA:ENIKSCE Uniprot:Q54LN2
Length = 4592
Score = 146 (56.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 57 MSITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXX-HEDLAASGKG 115
+S+ + V G S+++ +GKG+A L+FD +Y E + K
Sbjct: 4325 ISLVKNSVYGLFNTLSKLSNTVGKGVAILSFDDQYLRNRQRSRQKKAKHLGEGVVYGFKS 4384
Query: 116 LVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
L G + GV+GVVTKPIEGA +EGF KG+ + +
Sbjct: 4385 LGKGVIDGVTGVVTKPIEGAIKGSIEGFAKGMAQGV 4420
Score = 73 (30.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 4 GIQRILLLTEDDAVF-TDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMSITRI 62
G R+L+L+ D + S E ++ LS+ RIGVSL+D+ EL+Y+S+ I
Sbjct: 3942 GPTRVLVLSYDQPKDDSSSELSQTVENCKLDLQLSLPRIGVSLIDHNS-KELIYLSLNDI 4000
Query: 63 GV 64
+
Sbjct: 4001 SL 4002
Score = 45 (20.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 6 QRILLLTEDDAVFTDV 21
Q +L+L EDDA+ D+
Sbjct: 2073 QIVLMLNEDDAILIDL 2088
Score = 36 (17.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 5/25 (20%), Positives = 16/25 (64%)
Query: 21 VRASGNYELFDQEISLSMHRIGVSL 45
+++ N FD E++L++ + +++
Sbjct: 1891 IQSKENIHPFDSELNLTLRQFQITV 1915
Score = 35 (17.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 18 FTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNE 53
F D+ S N F + S+ I +S N N+
Sbjct: 2361 FIDLFCSKNITTFQGPLKDSLTNINISGSFNNSSNQ 2396
Score = 33 (16.7 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 35 SLSMHRIGVSLLD 47
S+ ++IG S++D
Sbjct: 3830 SIKFYQIGTSIID 3842
>ASPGD|ASPL0000032755 [details] [associations]
symbol:AN5579 species:162425 "Emericella nidulans"
[GO:0045053 "protein retention in Golgi apparatus" evidence=IEA]
[GO:0006623 "protein targeting to vacuole" evidence=IEA]
[GO:0032120 "ascospore-type prospore membrane assembly"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0019898
"extrinsic to membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005628
"prospore membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR009543 GO:GO:0008104 EMBL:BN001305
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
EMBL:AACD01000096 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 OrthoDB:EOG4M68RM InterPro:IPR017148
PIRSF:PIRSF037235 HOGENOM:HOG000191432 RefSeq:XP_663183.1
STRING:Q5B1K1 EnsemblFungi:CADANIAT00003500 GeneID:2871869
KEGG:ani:AN5579.2 OMA:PAFDYTE Uniprot:Q5B1K1
Length = 3169
Score = 154 (59.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHE--DLAASGKG 115
S + V G + + S++TG+M KG+AA T DKE+ H + A G+
Sbjct: 2906 SFAKNTVFGFSDSISKLTGSMSKGLAAATLDKEFQDQRRMSKTRNRPKHALYGITAGGRA 2965
Query: 116 LVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGK 149
V G+ G+ P+ GA+ +G++GF KGVGK
Sbjct: 2966 FGNSIVSGIEGIARHPLHGAEKEGIQGFFKGVGK 2999
Score = 59 (25.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 19 TDVRASGNYELFDQEISLS--MHR--IGVSLLDNEKGNELLYMSITRIGV 64
T + + FD +++ +H IG+SL+ N+K ELLYM+ I V
Sbjct: 2590 TSINTGFEVKEFDSDVNFKAQLHLGGIGISLI-NQKMKELLYMTFRDIEV 2638
Score = 37 (18.1 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 46 LDNEKGNELLYMSIT-RIGV 64
+DNE GN+ + ++ R G+
Sbjct: 251 IDNEDGNQFILRPVSGRAGL 270
>DICTYBASE|DDB_G0286725 [details] [associations]
symbol:vps13A "vacuolar protein sorting-associated
protein 13 family protein" species:44689 "Dictyostelium discoideum"
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR009543 dictyBase:DDB_G0286725 GO:GO:0005794
GenomeReviews:CM000153_GR GO:GO:0015031 EMBL:AAFI02000089
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
RefSeq:XP_637643.1 PRIDE:Q54LB8 EnsemblProtists:DDB0234198
GeneID:8625784 KEGG:ddi:DDB_G0286725 eggNOG:COG5043
InParanoid:Q54LB8 OMA:QQSPNQQ ProtClustDB:CLSZ2846688
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650 Uniprot:Q54LB8
Length = 3373
Score = 171 (65.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGL 116
S + V G S++TG +G G+A L+FD++Y E LA G GL
Sbjct: 3094 SFVKNSVFGTFNTLSKLTGTLGTGVATLSFDEKYLQERKLHQARKPSHVGEGLAMGGIGL 3153
Query: 117 VLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G +QG++G+VTKP+EGAK G GF KG+ + +
Sbjct: 3154 GRGILQGITGIVTKPVEGAKKGGFAGFAKGLAQGV 3188
Score = 42 (19.8 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 22 RASGNYELFDQEISLSMHRIGVSLLDNEKGNELL 55
+ G E + S+ ++ +G++L N+ NELL
Sbjct: 1113 KKKGPTEFVSMKFSVHINSLGLAL--NQDNNELL 1144
Score = 40 (19.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 4 GIQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHR-------IGVSLLDNEKGNELLY 56
G R+LL + ++ F ++A + + + S S + IG S++D EL Y
Sbjct: 2747 GPSRVLLFSTNEKKFRSIKAWTDNKAVNLSQSQSEYHFNIRCSGIGCSIIDKTP-KELAY 2805
Query: 57 MSI 59
+S+
Sbjct: 2806 ISM 2808
Score = 37 (18.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 25 GNYELFDQEISLSMHRIGVSLLDNEK 50
G Y+ F E ++ +I + + NEK
Sbjct: 2580 GEYKPFHWEENVENKKISIRPITNEK 2605
Score = 36 (17.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 9 LLLTEDD----AVFTDVRASGNYELFDQEISLSMHRIGVSLLDN 48
L L +D+ +FT S + +F L R+G +LD+
Sbjct: 1134 LALNQDNNELLGIFTINNVSTDVSMFKDNRMLVQGRLGSIILDD 1177
>CGD|CAL0001755 [details] [associations]
symbol:VPS13 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005628 "prospore membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IEA]
[GO:0032120 "ascospore-type prospore membrane assembly"
evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] InterPro:IPR009543 CGD:CAL0001755 GO:GO:0008104
EMBL:AACQ01000179 EMBL:AACQ01000178 InterPro:IPR026854 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
InterPro:IPR017148 PIRSF:PIRSF037235 RefSeq:XP_711864.1
RefSeq:XP_723604.1 STRING:Q59Q73 GeneID:3646528 GeneID:3646548
KEGG:cal:CaO19.11894 KEGG:cal:CaO19.4416 Uniprot:Q59Q73
Length = 3083
Score = 139 (54.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 57 MSITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHE--DLAASGK 114
+S + V G + + S++TG++ KG++ T DK + H A
Sbjct: 2820 LSFVKKSVFGFSDSISKVTGSIAKGLSVATMDKSFQERRRLNTRRNRPKHALYGFATGAN 2879
Query: 115 GLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
GV+GV T PIEGA DG GF KG+GK +
Sbjct: 2880 SFFDSLSSGVTGVATAPIEGANSDGAAGFFKGLGKGI 2916
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 8 ILLLTEDDAVFTD--VRASGNYELFDQE-ISLSMHRIGVSLLD-NEK 50
+LLL +D T+ V G + Q ISL+ + IG+ L+D NE+
Sbjct: 1530 VLLLADDTRENTEAVVFKVGQILVTQQNVISLAANNIGMYLMDMNEQ 1576
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1 MRTGIQRILLLTEDDAVFTDVRASGNYEL 29
++ I+ I L EDD+V T+ S + L
Sbjct: 149 LQVTIKNIHLKYEDDSVLTETPYSIGFTL 177
>UNIPROTKB|Q59Q73 [details] [associations]
symbol:VPS13 "Putative uncharacterized protein VPS13"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR009543 CGD:CAL0001755
GO:GO:0008104 EMBL:AACQ01000179 EMBL:AACQ01000178
InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 InterPro:IPR017148 PIRSF:PIRSF037235
RefSeq:XP_711864.1 RefSeq:XP_723604.1 STRING:Q59Q73 GeneID:3646528
GeneID:3646548 KEGG:cal:CaO19.11894 KEGG:cal:CaO19.4416
Uniprot:Q59Q73
Length = 3083
Score = 139 (54.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 57 MSITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHE--DLAASGK 114
+S + V G + + S++TG++ KG++ T DK + H A
Sbjct: 2820 LSFVKKSVFGFSDSISKVTGSIAKGLSVATMDKSFQERRRLNTRRNRPKHALYGFATGAN 2879
Query: 115 GLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
GV+GV T PIEGA DG GF KG+GK +
Sbjct: 2880 SFFDSLSSGVTGVATAPIEGANSDGAAGFFKGLGKGI 2916
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 8 ILLLTEDDAVFTD--VRASGNYELFDQE-ISLSMHRIGVSLLD-NEK 50
+LLL +D T+ V G + Q ISL+ + IG+ L+D NE+
Sbjct: 1530 VLLLADDTRENTEAVVFKVGQILVTQQNVISLAANNIGMYLMDMNEQ 1576
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1 MRTGIQRILLLTEDDAVFTDVRASGNYEL 29
++ I+ I L EDD+V T+ S + L
Sbjct: 149 LQVTIKNIHLKYEDDSVLTETPYSIGFTL 177
>UNIPROTKB|G4N6L6 [details] [associations]
symbol:MGG_06537 "Vacuolar protein sorting-associated
protein 13" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009543 GO:GO:0008104 EMBL:CM001234
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
InterPro:IPR017148 PIRSF:PIRSF037235 RefSeq:XP_003717004.1
ProteinModelPortal:G4N6L6 EnsemblFungi:MGG_06537T0 GeneID:2684692
KEGG:mgr:MGG_06537 Uniprot:G4N6L6
Length = 3223
Score = 149 (57.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHE--DLAASGKG 115
S + V G + + S+ TGAM KG+AA T DK++ H + A
Sbjct: 2960 SFAKKTVYGFSDSFSKFTGAMSKGLAAATLDKQFQDRRRITRARNRPKHALYGVTAGANS 3019
Query: 116 LVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
L GV G+ KP+EGA+ +G GF KGVGK +
Sbjct: 3020 LFTSVASGVGGLARKPLEGAEQEGALGFFKGVGKGV 3055
>DICTYBASE|DDB_G0267422 [details] [associations]
symbol:tipC species:44689 "Dictyostelium discoideum"
[GO:0045324 "late endosome to vacuole transport" evidence=ISS]
[GO:0031154 "culmination involved in sorocarp development"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] dictyBase:DDB_G0267422 GO:GO:0005794
GenomeReviews:CM000150_GR GO:GO:0015031 EMBL:AAFI02000003
GO:GO:0031154 GO:GO:0045324 InterPro:IPR015412 InterPro:IPR026854
Pfam:PF09333 Pfam:PF12624 eggNOG:COG5043 ProtClustDB:CLSZ2846688
InterPro:IPR026847 PANTHER:PTHR16166 EMBL:AF079445
RefSeq:XP_647570.1 STRING:Q55FG3 PRIDE:Q55FG3
EnsemblProtists:DDB0191112 GeneID:8616380 KEGG:ddi:DDB_G0267422
OMA:WEPLIEN Uniprot:Q55FG3
Length = 3848
Score = 116 (45.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXX-XXXHEDLAASGKGL 116
S+ V G A + S+ITG + KG+ L+ D Y E L +
Sbjct: 3568 SLINNSVFGFADSTSKITGTISKGLVQLSLDDSYIKERQESNKQKPKGVKEGLEFGFRDF 3627
Query: 117 VLGFVQGVSGVVTKPIEGA-KDDGVEGFVKGVGKAM 151
G ++G++G++ +P +GA ++ EGF KG+GK +
Sbjct: 3628 GEGVIKGITGIIDEPYKGATQEKSWEGFFKGIGKGV 3663
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 33 EISLSMHRIGVSLLDN-EKGNELLYMSI 59
E S+ + IG+S+++ E++Y+SI
Sbjct: 3235 EFSIDLSNIGISIINKIPTREEIVYLSI 3262
Score = 34 (17.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 3 TGIQRILLLTEDDAV-FTDVRASGNYELFDQEISL 36
T R+ L E+ V + +SG Y+ D +IS+
Sbjct: 3139 TKTYRLGNLEENSIVSIKNPNSSGGYDRVDFQISI 3173
>DICTYBASE|DDB_G0274917 [details] [associations]
symbol:vps13B "Vacuolar protein sorting-associated
protein 13C" species:44689 "Dictyostelium discoideum" [GO:0005615
"extracellular space" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0274917 GO:GO:0005794 GO:GO:0005615
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000012
InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 RefSeq:XP_644147.1 EnsemblProtists:DDB0234199
GeneID:8619576 KEGG:ddi:DDB_G0274917 InParanoid:Q555C6 OMA:CHIASIY
Uniprot:Q555C6
Length = 6061
Score = 118 (46.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 67 AAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXX--XHEDLAASGKGLVLGFVQGV 124
AA ++S++ G + G A + D+ Y H S KG +G + GV
Sbjct: 5777 AANSSSKLFGTISSGFATWSLDETYLRRRDAEEKVKAKHIAHGFYLGS-KGFAMGIIDGV 5835
Query: 125 SGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G+V P+ GA +G+ GF KG GK +
Sbjct: 5836 FGIVEHPVRGAMQEGLLGFFKGCGKGV 5862
Score = 51 (23.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 9 LLLTEDDAVFTDVRASGNYELFDQEISLSMHR 40
L+ + DD +F +GN+ +F+ E+ S HR
Sbjct: 3593 LIFSADDYLFLYTIFTGNW-MFNDEVDSSSHR 3623
Score = 43 (20.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 12 TEDDAVFTDV-RASGNYELFDQEISLSMHRIGVSLLDNEKGNELLYMS 58
T D +FT R + + + +S +G S +D+ EL+Y++
Sbjct: 5466 TTRDLLFTTKHRVTKELDTLEFAFDISFENLGFSFIDDVP-QELIYVA 5512
Score = 41 (19.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 37 SMHRIGVSLLDNEKGNELLYMSITRIGV 64
S++ + +SL NE+G EL SI + +
Sbjct: 1227 SIYSLSISL--NEEGRELGRFSINQFAI 1252
Score = 39 (18.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 28 ELFDQEISLSMHRIGVSLLDNEKGN 52
E+F +++ ++ + LL N+ N
Sbjct: 2082 EIFGMKVNCKFDKVLIELLSNDGNN 2106
Score = 35 (17.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 5 IQRILLLTEDDAVFTDVRASGNYELFDQEISLSMHRIGVSLLDNEKGNELLY 56
+ +L T D + A L DQ+ S GVS+ N+ G+ +
Sbjct: 4652 LNSVLFKTRDFRAHGSLNAHVAIRLIDQDSGPSQWIHGVSI--NQIGDNFYF 4701
Score = 34 (17.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 30 FDQEISLSMHRIGVSLL 46
FD+EI L + I +++L
Sbjct: 1341 FDKEIQLYLRSIRLTVL 1357
Score = 34 (17.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 5 IQRILLLTEDDAVFTDV-RASGNYELFDQEISLSMHRIGVSLLDNEKGN 52
I+ I +++ D+ + N+ D EI ++R S DNE+ +
Sbjct: 3330 IRSIKTKENKQSLYLDILKPKYNFNENDIEIENKLNRNSNSDSDNEENH 3378
>POMBASE|SPBC21C3.01c [details] [associations]
symbol:vps13a "chorein homolog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0045053 "protein retention in
Golgi apparatus" evidence=ISO] [GO:0045324 "late endosome to
vacuole transport" evidence=ISO] PomBase:SPBC21C3.01c
InterPro:IPR009543 GO:GO:0005829 GO:GO:0005794 GO:GO:0006886
GO:GO:0005768 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0045324
InterPro:IPR026854 Pfam:PF12624 GO:GO:0045053 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650 PIR:T50345
OrthoDB:EOG4M68RM NextBio:20801643 InterPro:IPR017148
PIRSF:PIRSF037235 Uniprot:P87319
Length = 3011
Score = 115 (45.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXH--EDLAASGKG 115
S + V G + S++TG + + ++ +T D ++ H + A
Sbjct: 2805 SFIKKAVFGITDSISKVTGTISRSLSVITLDPKFQSRRRAARIRNRPVHILYGVTAGAAS 2864
Query: 116 LVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
L G GV G+ +PI GA+ +G+ G VKG+GK +
Sbjct: 2865 LYTGVRSGVRGLALQPIIGARRNGLPGLVKGLGKGL 2900
Score = 48 (22.0 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 26 NYELFDQEISLS----MHRIGVSLLDNEKGNELLYMSITRIGV 64
N E FD I LS + IG+SL++ EL Y++ I +
Sbjct: 2494 NLEQFDSGIDLSVKFLLEGIGISLVERNT-QELAYLTFHGINL 2535
Score = 39 (18.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 8 ILLLTEDDAVFTDVRASGNYELFDQEISLS 37
+L L +F+ +R + Y+L+ ++SL+
Sbjct: 1154 LLKLKRFQELFSSIRYAIYYKLYGNKVSLT 1183
>SGD|S000003963 [details] [associations]
symbol:VPS13 "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0019898 "extrinsic to membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0045053
"protein retention in Golgi apparatus" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IGI;IMP] [GO:0005628
"prospore membrane" evidence=IDA] [GO:0006623 "protein targeting to
vacuole" evidence=IMP] [GO:0032120 "ascospore-type prospore
membrane assembly" evidence=IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005768 "endosome"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
SGD:S000003963 InterPro:IPR009543 GO:GO:0005739 GO:GO:0005794
GO:GO:0019898 EMBL:BK006945 GO:GO:0005628 InterPro:IPR011050
SUPFAM:SSF51126 GO:GO:0006623 GO:GO:0045324 GO:GO:0032120
InterPro:IPR026854 Pfam:PF12624 GO:GO:0045053 EMBL:Z73144
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 OrthoDB:EOG4M68RM InterPro:IPR017148
PIRSF:PIRSF037235 EMBL:AF001317 EMBL:Z73145 PIR:S64791
RefSeq:NP_013060.1 ProteinModelPortal:Q07878 DIP:DIP-6519N
IntAct:Q07878 MINT:MINT-645047 STRING:Q07878 PaxDb:Q07878
PeptideAtlas:Q07878 PRIDE:Q07878 EnsemblFungi:YLL040C GeneID:850619
KEGG:sce:YLL040C CYGD:YLL040c HOGENOM:HOG000191432 OMA:SGVIWEE
NextBio:966517 Genevestigator:Q07878 GermOnline:YLL040C
Uniprot:Q07878
Length = 3144
Score = 108 (43.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 57 MSITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHEDLAASGKGL 116
+S + V G + + S+ TG+M KG++ +T D E+ LA S +
Sbjct: 2884 LSFAKKTVFGLSDSMSKFTGSMAKGLS-VTQDLEFQRVRRLQQRINKNNRNALANSAQSF 2942
Query: 117 VLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G+SG+ P + + +G GF+KG+GK +
Sbjct: 2943 ASTLGSGLSGIALDPYKAMQKEGAAGFLKGLGKGI 2977
Score = 47 (21.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 28 ELFDQEISLSMHRIGVSLLDNEKGNELLYMSITRI 62
E + +I +S +G+SL+ N + ELLY+++ I
Sbjct: 2579 EKVNTQIVVSFKGVGISLI-NGRLQELLYINMRGI 2612
Score = 38 (18.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 28 ELFDQEISLSMHRIGVSL 45
ELFDQ+I + M + + L
Sbjct: 1004 ELFDQDIVMHMSELQLVL 1021
>DICTYBASE|DDB_G0287055 [details] [associations]
symbol:vps13F "vacuolar protein sorting-associated
protein 13 family protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] dictyBase:DDB_G0287055 GO:GO:0005525 GO:GO:0005794
GenomeReviews:CM000153_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006184
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
EMBL:AAFI02000096 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 RefSeq:XP_637397.1 EnsemblProtists:DDB0304549
GeneID:8625928 KEGG:ddi:DDB_G0287055 InParanoid:Q54KX3 OMA:ININAPH
Uniprot:Q54KX3
Length = 4246
Score = 105 (42.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 58 SITRIGVGGAAGAASRITGAMGKGIAALTFDKEYXXXXXXXXXXXXXXHEDLAASGKG-L 116
S+ + G +AS++T +G IA + D+ Y D ++G G
Sbjct: 3970 SLVSNSIYGIFNSASKLTNTVGSAIAPFSMDENYLAQRDRHTQPKHAI--DGVSNGIGRF 4027
Query: 117 VLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
G G+SG+ +P++ +D G G VKG GK +
Sbjct: 4028 TQGLAHGLSGLFDQPVKEFQDQGFSGLVKGFGKGI 4062
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 9 LLLTEDDAVF-----TDVRASGNYELFDQEISLSMHRIGVS-LLDNEKGNELLYMSITRI 62
L + EDD F +D+ A FD I LS+ ++ + L + K Y++ + I
Sbjct: 1480 LQVVEDDKPFIRMILSDISAQVLKRTFDTSIKLSLAKLSIEDLYQDFKNESFKYLANSSI 1539
Score = 35 (17.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 34 ISLSMHRIGVSLLDNEKGNELLYMSITRI 62
+S + SL++ + GNE S+ I
Sbjct: 2165 VSFEIDEFECSLIEYDNGNEYSNFSLGSI 2193
Score = 34 (17.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 29 LFDQEISLSMHRIGVSLLDNEKGNE 53
+ DQE+ + + GV+ D+ +E
Sbjct: 1384 IHDQEVDIEEYYNGVNSDDDNNDDE 1408
Score = 34 (17.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 8 ILLLTEDDAVFTDVRASG---NYELFDQEISLSMHRIG---VSLLDNEKGNEL 54
++ L EDD + + S N+++ D E S+ ++G +S + E +L
Sbjct: 1715 VVNLNEDDQSYFALTVSDLSINFDI-DLESSMMRFKLGNLTISDISKEASKDL 1766
>DICTYBASE|DDB_G0268886 [details] [associations]
symbol:vps13E "vacuolar protein sorting-associated
protein 13 family protein" species:44689 "Dictyostelium discoideum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] InterPro:IPR009543
dictyBase:DDB_G0268886 GO:GO:0005794 GenomeReviews:CM000150_GR
GO:GO:0015031 EMBL:AAFI02000004 InterPro:IPR026854 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
RefSeq:XP_647037.1 EnsemblProtists:DDB0234203 GeneID:8616732
KEGG:ddi:DDB_G0268886 InParanoid:Q55EI3 OMA:NITIEYL Uniprot:Q55EI3
Length = 4241
Score = 119 (46.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 26 NYELFDQEISLSMHR--IGVSLLDN-EKGNELLYMSITRIGVGGAAGAASRITGAMGKGI 82
N+ + +E +SM + +G S D+ +G++ S+ + V G + +++TG+ GK +
Sbjct: 3486 NFGIGFKEFFVSMGKGLVGNSFTDSFGQGSK----SLAKHSVYGIFDSGAKLTGSAGKVL 3541
Query: 83 AALTFDKEYXXXXXXXXXXXXXXH-EDLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVE 141
+ L+ D+ Y + L G+ +G SG V P EG K+ G +
Sbjct: 3542 STLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGFVKLPYEGGKEAGPK 3601
Query: 142 GFVKGVGK 149
G VKG+GK
Sbjct: 3602 GVVKGIGK 3609
>FB|FBgn0052113 [details] [associations]
symbol:CG32113 species:7227 "Drosophila melanogaster"
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR009543
GO:GO:0005875 GO:GO:0008104 EMBL:AE014296 InterPro:IPR000772
PROSITE:PS50231 InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 RefSeq:NP_729825.2 UniGene:Dm.15345
STRING:Q9VU08 PaxDb:Q9VU08 EnsemblMetazoa:FBtr0273390 GeneID:39448
KEGG:dme:Dmel_CG32113 UCSC:CG32113-RB FlyBase:FBgn0052113
InParanoid:Q9VU08 OMA:EHDTALS OrthoDB:EOG4BG79Q PhylomeDB:Q9VU08
GenomeRNAi:39448 NextBio:813690 ArrayExpress:Q9VU08 Bgee:Q9VU08
Uniprot:Q9VU08
Length = 3919
Score = 106 (42.4 bits), Expect = 0.00049, P = 0.00049
Identities = 34/111 (30%), Positives = 51/111 (45%)
Query: 42 GVSLLDNEKGNELLYMSITRIGVGGA-AGAASRITGAMGKGIAALTFDKEYXXXXXXXXX 100
GVS L E + L ++T G+ + A ++ ++GK + D E
Sbjct: 3621 GVSGLIFEGSVKSLVKNVTH-GISNSTAKLTETLSDSLGK-VVLDDHDNETRQRILELQS 3678
Query: 101 XXXXXHEDLAASGKGLVLGFVQGVSGVVTKPIEGAKDDGVEGFVKGVGKAM 151
H LAA KGL G + GV+ +V +GA DGV GF+ G+GK +
Sbjct: 3679 NTSGGH--LAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGL 3727
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.138 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 151 137 0.00091 102 3 11 22 0.45 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 456 (49 KB)
Total size of DFA: 93 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.79u 0.12s 11.91t Elapsed: 00:00:01
Total cpu time: 11.79u 0.12s 11.91t Elapsed: 00:00:01
Start: Thu Aug 15 14:13:40 2013 End: Thu Aug 15 14:13:41 2013