BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17172
(80 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZKL|A Chain A, Multiple Determinants For Inhibitor Selectivity Of Cyclic
Nucleotide Phosphodiesterases
Length = 353
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 13/93 (13%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
+E+F+LD++++ + +I+E YH NPYHN++HA D+ + + T +I+
Sbjct: 55 IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 114
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
SL+AA HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 115 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 147
>pdb|3G3N|A Chain A, Pde7a Catalytic Domain In Complex With 3-(2,6-
Difluorophenyl)-2-(Methylthio)quinazolin-4(3h)-One
Length = 318
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 13/93 (13%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
+E+F+LD++++ + +I+E YH NPYHN++HA D+ + + T +I+
Sbjct: 46 IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 105
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
SL+AA HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 106 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 138
>pdb|3ECM|A Chain A, Crystal Structure Of The Unliganded Pde8a Catalytic Domain
pdb|3ECN|A Chain A, Crystal Structure Of Pde8a Catalytic Domain In Complex
With Ibmx
pdb|3ECN|B Chain B, Crystal Structure Of Pde8a Catalytic Domain In Complex
With Ibmx
Length = 338
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 3 HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMAS 49
H + +R W +IE YH +NPYHNS H+ D IK L ++ +A+
Sbjct: 51 HCSESTLRSW--LQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAA 108
Query: 50 LLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
L+AA HD+DHPG FL + LA LY
Sbjct: 109 LIAATIHDVDHPGRTNSFLCNAGSELAILY 138
>pdb|2QYM|A Chain A, Crystal Structure Of Unliganded Pde4c2
Length = 358
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 17 LIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGV 63
++E YH YHNS+HA D+ + T LEI+A+L A+ HD+DHPGV
Sbjct: 71 MLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGV 130
Query: 64 NQPFLIATSNHLAALY 79
+ FLI T++ LA +Y
Sbjct: 131 SNQFLINTNSELALMY 146
>pdb|2QYN|A Chain A, Crystal Structure Of Pde4d2 In Complex With Inhibitor Npv
pdb|2QYN|B Chain B, Crystal Structure Of Pde4d2 In Complex With Inhibitor Npv
Length = 328
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ HD+DHPGV+
Sbjct: 64 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 123
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138
>pdb|3G4G|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With
Regulatory Domain And D155871
pdb|3G4G|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With
Regulatory Domain And D155871
pdb|3G4G|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With
Regulatory Domain And D155871
pdb|3G4G|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With
Regulatory Domain And D155871
Length = 421
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ HD+DHPGV+
Sbjct: 151 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 210
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 211 NQFLINTNSELALMY 225
>pdb|1TB7|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Amp
pdb|1TB7|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Amp
pdb|1TBB|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Rolipram
pdb|1TBB|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Rolipram
Length = 332
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ HD+DHPGV+
Sbjct: 68 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 127
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 128 NQFLINTNSELALMY 142
>pdb|1ZKN|A Chain A, Structure Of Pde4d2-Ibmx
pdb|1ZKN|B Chain B, Structure Of Pde4d2-Ibmx
pdb|1ZKN|C Chain C, Structure Of Pde4d2-Ibmx
pdb|1ZKN|D Chain D, Structure Of Pde4d2-Ibmx
Length = 334
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ HD+DHPGV+
Sbjct: 71 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 130
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 131 NQFLINTNSELALMY 145
>pdb|1MKD|A Chain A, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|B Chain B, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|C Chain C, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|D Chain D, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|E Chain E, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|F Chain F, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|G Chain G, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|H Chain H, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|I Chain I, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|J Chain J, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|K Chain K, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
pdb|1MKD|L Chain L, Crystal Structure Of Pde4d Catalytic Domain And
Zardaverine Complex
Length = 328
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ HD+DHPGV+
Sbjct: 64 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 123
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138
>pdb|3SL5|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2
Complexed With Compound 10d
pdb|3SL5|B Chain B, Crystal Structure Of The Catalytic Domain Of Pde4d2
Complexed With Compound 10d
pdb|3SL5|C Chain C, Crystal Structure Of The Catalytic Domain Of Pde4d2
Complexed With Compound 10d
pdb|3SL5|D Chain D, Crystal Structure Of The Catalytic Domain Of Pde4d2
Complexed With Compound 10d
Length = 359
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 54 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145
>pdb|3IAD|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With Bound
Allosteric Modulator
pdb|3IAD|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With Bound
Allosteric Modulator
pdb|3IAD|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With Bound
Allosteric Modulator
pdb|3IAD|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With Bound
Allosteric Modulator
Length = 377
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 56 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 115
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 116 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 147
>pdb|2FM0|A Chain A, Crystal Structure Of Pde4d In Complex With L-869298
pdb|2FM0|B Chain B, Crystal Structure Of Pde4d In Complex With L-869298
pdb|2FM0|C Chain C, Crystal Structure Of Pde4d In Complex With L-869298
pdb|2FM0|D Chain D, Crystal Structure Of Pde4d In Complex With L-869298
pdb|2FM5|A Chain A, Crystal Structure Of Pde4d2 In Complex With Inhibitor L-
869299
pdb|2FM5|B Chain B, Crystal Structure Of Pde4d2 In Complex With Inhibitor L-
869299
pdb|2FM5|C Chain C, Crystal Structure Of Pde4d2 In Complex With Inhibitor L-
869299
pdb|2FM5|D Chain D, Crystal Structure Of Pde4d2 In Complex With Inhibitor L-
869299
pdb|3SL3|A Chain A, Crystal Structure Of The Apo Form Of The Catalytic Domain
Of Pde4d2
pdb|3SL3|B Chain B, Crystal Structure Of The Apo Form Of The Catalytic Domain
Of Pde4d2
pdb|3SL3|C Chain C, Crystal Structure Of The Apo Form Of The Catalytic Domain
Of Pde4d2
pdb|3SL3|D Chain D, Crystal Structure Of The Apo Form Of The Catalytic Domain
Of Pde4d2
pdb|3SL4|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10d
pdb|3SL4|B Chain B, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10d
pdb|3SL4|C Chain C, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10d
pdb|3SL4|D Chain D, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10d
pdb|3SL6|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 12c
pdb|3SL6|B Chain B, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 12c
pdb|3SL6|C Chain C, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 12c
pdb|3SL6|D Chain D, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 12c
pdb|3SL8|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10o
pdb|3SL8|B Chain B, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10o
pdb|3SL8|C Chain C, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10o
pdb|3SL8|D Chain D, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
Compound 10o
Length = 361
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 54 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145
>pdb|1XOM|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Cilomilast
pdb|1XOM|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Cilomilast
pdb|1XON|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Piclamilast
pdb|1XON|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Piclamilast
pdb|1XOQ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Roflumilast
pdb|1XOQ|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Roflumilast
pdb|1XOR|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Zardaverine
pdb|1XOR|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With Zardaverine
pdb|1Y2B|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5- Dimethyl-1h-Pyrazole-4-Carboxylic Acid Ethyl
Ester
pdb|1Y2B|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5- Dimethyl-1h-Pyrazole-4-Carboxylic Acid Ethyl
Ester
pdb|1Y2C|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5- Dimethyl-1-Phenyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2C|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5- Dimethyl-1-Phenyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2D|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 1-(4-
Methoxy-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2D|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 1-(4-
Methoxy-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2E|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 1-(4-
Amino-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic Acid
Ethyl Ester
pdb|1Y2E|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 1-(4-
Amino-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic Acid
Ethyl Ester
pdb|1Y2K|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5-
Dimethyl-1-(3-Nitro-Phenyl)-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2K|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4d In Complex
With 3,5-
Dimethyl-1-(3-Nitro-Phenyl)-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|3IAK|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d (Pde4d)
With Papaverine.
pdb|3K4S|A Chain A, The Structure Of The Catalytic Domain Of Human Pde4d With
4- (3-Butoxy-4-Methoxyphenyl)methyl-2-Imidazolidone
Length = 349
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 68 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 127
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 128 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 159
>pdb|1Q9M|A Chain A, Three Dimensional Structures Of Pde4d In Complex With
Roliprams And Implication On Inhibitor Selectivity
pdb|1Q9M|B Chain B, Three Dimensional Structures Of Pde4d In Complex With
Roliprams And Implication On Inhibitor Selectivity
pdb|1Q9M|C Chain C, Three Dimensional Structures Of Pde4d In Complex With
Roliprams And Implication On Inhibitor Selectivity
pdb|1Q9M|D Chain D, Three Dimensional Structures Of Pde4d In Complex With
Roliprams And Implication On Inhibitor Selectivity
pdb|1OYN|A Chain A, Crystal Structure Of Pde4d2 In Complex With (R,S)-Rolipram
pdb|1OYN|B Chain B, Crystal Structure Of Pde4d2 In Complex With (R,S)-Rolipram
pdb|1OYN|C Chain C, Crystal Structure Of Pde4d2 In Complex With (R,S)-Rolipram
pdb|1OYN|D Chain D, Crystal Structure Of Pde4d2 In Complex With (R,S)-Rolipram
pdb|1PTW|A Chain A, The Crystal Structure Of Amp-bound Pde4 Suggests A
Mechanism For Phosphodiesterase Catalysis
pdb|1PTW|B Chain B, The Crystal Structure Of Amp-bound Pde4 Suggests A
Mechanism For Phosphodiesterase Catalysis
pdb|1PTW|C Chain C, The Crystal Structure Of Amp-bound Pde4 Suggests A
Mechanism For Phosphodiesterase Catalysis
pdb|1PTW|D Chain D, The Crystal Structure Of Amp-bound Pde4 Suggests A
Mechanism For Phosphodiesterase Catalysis
pdb|3V9B|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
(S)-N-(3-{1-
[1-(3-Cyclopropylmethoxy-4-Difluoromethoxyphenyl)-2-(1-
Oxypyridin-4- Yl)-Ethyl]-1h-Pyrazl-3-Yl}phenyl)acetamide
pdb|3V9B|B Chain B, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
(S)-N-(3-{1-
[1-(3-Cyclopropylmethoxy-4-Difluoromethoxyphenyl)-2-(1-
Oxypyridin-4- Yl)-Ethyl]-1h-Pyrazl-3-Yl}phenyl)acetamide
pdb|3V9B|C Chain C, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
(S)-N-(3-{1-
[1-(3-Cyclopropylmethoxy-4-Difluoromethoxyphenyl)-2-(1-
Oxypyridin-4- Yl)-Ethyl]-1h-Pyrazl-3-Yl}phenyl)acetamide
pdb|3V9B|D Chain D, Crystal Structure Of The Catalytic Domain Of Pde4d2 With
(S)-N-(3-{1-
[1-(3-Cyclopropylmethoxy-4-Difluoromethoxyphenyl)-2-(1-
Oxypyridin-4- Yl)-Ethyl]-1h-Pyrazl-3-Yl}phenyl)acetamide
Length = 360
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 54 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145
>pdb|3G4I|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With
D155871
pdb|3G4I|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With
D155871
pdb|3G4I|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With
D155871
pdb|3G4I|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With
D155871
pdb|3G4K|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With
Rolipram
pdb|3G4K|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With
Rolipram
pdb|3G4K|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With
Rolipram
pdb|3G4K|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With
Rolipram
pdb|3G4L|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With
Roflumilast
pdb|3G4L|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With
Roflumilast
pdb|3G4L|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With
Roflumilast
pdb|3G4L|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With
Roflumilast
pdb|3G58|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With
D155988PMNPQ
pdb|3G58|B Chain B, Crystal Structure Of Human Phosphodiesterase 4d With
D155988PMNPQ
pdb|3G58|C Chain C, Crystal Structure Of Human Phosphodiesterase 4d With
D155988PMNPQ
pdb|3G58|D Chain D, Crystal Structure Of Human Phosphodiesterase 4d With
D155988PMNPQ
Length = 381
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
++ F + V + +E+ YH YHN+IHA D+ + T LEI+
Sbjct: 56 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 115
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A++ A+ HD+DHPGV+ FLI T++ LA +Y
Sbjct: 116 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 147
>pdb|1XOZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex
With Tadalafil
pdb|1XP0|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex
With Vardenafil
Length = 364
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDHPGV+
Sbjct: 90 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 149
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 150 NQFLINTNSELALMY 164
>pdb|1T9S|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex
With Gmp
pdb|1T9S|B Chain B, Catalytic Domain Of Human Phosphodiesterase 5a In Complex
With Gmp
pdb|1TBF|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex
With Sildenafil
Length = 347
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDHPGV+
Sbjct: 90 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 149
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 150 NQFLINTNSELALMY 164
>pdb|3HC8|A Chain A, Investigation Of Aminopyridiopyrazinones As Pde5
Inhibitors: Evaluation Of Modifications To The Central
Ring System.
pdb|3HDZ|A Chain A, Identification, Synthesis, And Sar Of Amino Substituted
Pyrido[3,2b]pryaziones As Potent And Selective Pde5
Inhibitors
Length = 324
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDHPGV+
Sbjct: 67 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 126
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 127 NQFLINTNSELALMY 141
>pdb|2CHM|A Chain A, Crystal Structure Of N2 Substituted Pyrazolo
Pyrimidinones- A Flipped Binding Mode In Pde5
pdb|3TGE|A Chain A, A Novel Series Of Potent And Selective Pde5 Inhibitor1
pdb|3TGG|A Chain A, A Novel Series Of Potent And Selective Pde5 Inhibitor2
Length = 326
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDHPGV+
Sbjct: 69 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 128
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 129 NQFLINTNSELALMY 143
>pdb|2PW3|A Chain A, Structure Of The Pde4d-Camp Complex
pdb|2PW3|B Chain B, Structure Of The Pde4d-Camp Complex
Length = 327
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHN+IHA D+ + T LEI+A++ A+ H++DHPGV+
Sbjct: 64 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHNVDHPGVS 123
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138
>pdb|3ITM|A Chain A, Catalytic Domain Of Hpde2a
pdb|3ITM|B Chain B, Catalytic Domain Of Hpde2a
pdb|3ITM|C Chain C, Catalytic Domain Of Hpde2a
pdb|3ITM|D Chain D, Catalytic Domain Of Hpde2a
pdb|3ITU|A Chain A, Hpde2a Catalytic Domain Complexed With Ibmx
pdb|3ITU|B Chain B, Hpde2a Catalytic Domain Complexed With Ibmx
pdb|3ITU|C Chain C, Hpde2a Catalytic Domain Complexed With Ibmx
pdb|3ITU|D Chain D, Hpde2a Catalytic Domain Complexed With Ibmx
Length = 345
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
+ ++ +D + + ++++GY PYHN +HA ++ +L +EI
Sbjct: 55 INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 113
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A ++ + HDLDH G N F +A+ + LAALY
Sbjct: 114 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 145
>pdb|1Z1L|A Chain A, The Crystal Structure Of The Phosphodiesterase 2a
Catalytic Domain
Length = 345
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
+ ++ +D + + ++++GY PYHN +HA ++ +L +EI
Sbjct: 55 INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 113
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A ++ + HDLDH G N F +A+ + LAALY
Sbjct: 114 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 145
>pdb|3BJC|A Chain A, Crystal Structure Of The Pde5a Catalytic Domain In Complex
With A Novel Inhibitor
Length = 878
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 605 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 664
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 665 NSYIQRSEHPLAQLY 679
>pdb|3G45|A Chain A, Crystal Structure Of Human Phosphodiesterase 4b With
Regulatory Domain And D155988
pdb|3G45|B Chain B, Crystal Structure Of Human Phosphodiesterase 4b With
Regulatory Domain And D155988
Length = 421
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 151 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 210
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 211 NQFLINTNSELALMY 225
>pdb|3O0J|A Chain A, Pde4b In Complex With Ligand An2898
Length = 323
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 62 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 121
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 122 NQFLINTNSELALMY 136
>pdb|2QYL|A Chain A, Crystal Structure Of Pde4b2b In Complex With Inhibitor Npv
Length = 337
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 73 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147
>pdb|3LY2|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|C Chain C, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|D Chain D, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|E Chain E, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|F Chain F, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|G Chain G, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
pdb|3LY2|H Chain H, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
Wi Coumarin-Based Inhibitor
Length = 357
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|3D3P|A Chain A, Crystal Structure Of Pde4b Catalytic Domain In Complex
With A Pyrazolopyridine Inhibitor
pdb|3FRG|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex With A Quinoline Inhibitor
pdb|3GWT|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex With A Quinoline Inhibitor
pdb|3O56|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex With A 5- Heterocycle Pyrazolopyridine Inhibitor
pdb|3O57|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex With A 5- Heterocycle Pyrazolopyridine Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 73 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147
>pdb|1RO6|A Chain A, Crystal Structure Of Pde4b2b Complexed With Rolipram (r &
S)
pdb|1RO6|B Chain B, Crystal Structure Of Pde4b2b Complexed With Rolipram (r &
S)
pdb|1RO9|A Chain A, Crystal Structures Of The Catalytic Domain Of
Phosphodiesterase 4b2b Complexed With 8-Br-Amp
pdb|1RO9|B Chain B, Crystal Structures Of The Catalytic Domain Of
Phosphodiesterase 4b2b Complexed With 8-Br-Amp
pdb|1ROR|A Chain A, Crystal Structures Of The Catalytic Domain Of
Phosphodiesterase 4b2b Complexed With Amp
pdb|1ROR|B Chain B, Crystal Structures Of The Catalytic Domain Of
Phosphodiesterase 4b2b Complexed With Amp
Length = 378
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 73 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147
>pdb|3HMV|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex Tetrahydrobenzothiophene Inhibitor
pdb|3HMV|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b2b In
Complex Tetrahydrobenzothiophene Inhibitor
Length = 378
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 73 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147
>pdb|1F0J|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b
pdb|1F0J|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b2b
Length = 377
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 72 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 131
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 132 NQFLINTNSELALMY 146
>pdb|1TB5|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Amp
pdb|1TB5|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Amp
Length = 381
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 76 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 135
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 136 NQFLINTNSELALMY 150
>pdb|3IBJ|A Chain A, X-Ray Structure Of Pde2a
pdb|3IBJ|B Chain B, X-Ray Structure Of Pde2a
Length = 691
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
+ ++ +D + + ++++GY PYHN +HA ++ +L +EI
Sbjct: 416 INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 474
Query: 48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
A ++ + HDLDH G N F +A+ + LAALY
Sbjct: 475 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 506
>pdb|3KKT|A Chain A, Crystal Structure Of Human Pde4b With 5-[3-[(1s,2s,4r)-
Bicyclo[2.2.1]hept-2-Yloxy]-4-Methoxyp
Henyl]tetrahydro-2(1h)- Pyrimidinone Reveals Ordering Of
The C-Terminal Helix Residues 502- 509.
pdb|3KKT|B Chain B, Crystal Structure Of Human Pde4b With 5-[3-[(1s,2s,4r)-
Bicyclo[2.2.1]hept-2-Yloxy]-4-Methoxyp
Henyl]tetrahydro-2(1h)- Pyrimidinone Reveals Ordering Of
The C-Terminal Helix Residues 502- 509
Length = 398
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|1XLX|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Cilomilast
pdb|1XLX|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Cilomilast
pdb|1XOT|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Vardenafil
pdb|1XOT|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Vardenafil
pdb|1Y2H|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With 1-(2-
Chloro-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2H|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With 1-(2-
Chloro-Phenyl)-3,5-Dimethyl-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2J|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With 3,5-
Dimethyl-1-(3-Nitro-Phenyl)-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
pdb|1Y2J|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With 3,5-
Dimethyl-1-(3-Nitro-Phenyl)-1h-Pyrazole-4-Carboxylic
Acid Ethyl Ester
Length = 398
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|1XM4|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Piclamilast
pdb|1XMU|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Roflumilast
pdb|1XMY|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R)- Rolipram
Length = 398
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|1XLZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Filaminast
pdb|1XLZ|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Filaminast
pdb|1XM4|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Piclamilast
pdb|1XMU|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Roflumilast
pdb|1XMY|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R)- Rolipram
Length = 398
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|1XM6|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R)- Mesopram
pdb|1XM6|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R)- Mesopram
pdb|1XN0|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R,S)- Rolipram
pdb|1XN0|B Chain B, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With (R,S)- Rolipram
pdb|1XOS|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex
With Sildenafil
Length = 398
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A++ AA HD+DHPGV+
Sbjct: 93 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|2QYK|A Chain A, Crystal Structure Of Pde4a10 In Complex With Inhibitor Npv
pdb|2QYK|B Chain B, Crystal Structure Of Pde4a10 In Complex With Inhibitor Npv
Length = 335
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A+L AA HD+DHPGV+
Sbjct: 74 LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 133
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 134 NQFLINTNSELALMY 148
>pdb|3TVX|A Chain A, The Structure Of Pde4a With Pentoxifylline At 2.84a
Resolution
pdb|3TVX|B Chain B, The Structure Of Pde4a With Pentoxifylline At 2.84a
Resolution
Length = 338
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A+L AA HD+DHPGV+
Sbjct: 77 LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 136
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 137 NQFLINTNSELALMY 151
>pdb|1T9R|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a
Length = 366
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 93 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 152
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 153 NSYIQRSEHPLAQLY 167
>pdb|3I8V|A Chain A, Crystal Structure Of Human Pde4a With
4-(3-butoxy-4-methoxyphenyl) Methyl-2-imidazolidone
pdb|3I8V|B Chain B, Crystal Structure Of Human Pde4a With
4-(3-butoxy-4-methoxyphenyl) Methyl-2-imidazolidone
Length = 354
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
+E+ YH YHNS+HA D+ + T LEI+A+L AA HD+DHPGV+
Sbjct: 93 LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 152
Query: 65 QPFLIATSNHLAALY 79
FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167
>pdb|1UDT|A Chain A, Crystal Structure Of Human Phosphodiesterase 5 Complexed
With Sildenafil(Viagra)
pdb|1UDU|A Chain A, Crystal Structure Of Human Phosphodiesterase 5 Complexed
With Tadalafil(Cialis)
pdb|1UDU|B Chain B, Crystal Structure Of Human Phosphodiesterase 5 Complexed
With Tadalafil(Cialis)
pdb|1UHO|A Chain A, Crystal Structure Of Human Phosphodiesterase 5 Complexed
With Vardenafil(Levitra)
Length = 324
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 66 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 125
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 126 NSYIQRSEHPLAQLY 140
>pdb|1RKP|A Chain A, Crystal Structure Of Pde5a1-Ibmx
Length = 326
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 68 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 127
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 128 NSYIQRSEHPLAQLY 142
>pdb|3SHY|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
pdb|3SHZ|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
pdb|3SIE|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
pdb|3SIE|B Chain B, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
pdb|3TSE|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
pdb|3TSF|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In
Complex With Novel Inhibitors
Length = 347
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 89 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 148
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 149 NSYIQRSEHPLAQLY 163
>pdb|2H40|A Chain A, Crystal Structure Of The Catalytic Domain Of Unliganded
Pde5
pdb|2H42|A Chain A, Crystal Structure Of Pde5 In Complex With Sildenafil
pdb|2H42|B Chain B, Crystal Structure Of Pde5 In Complex With Sildenafil
pdb|2H42|C Chain C, Crystal Structure Of Pde5 In Complex With Sildenafil
pdb|2H44|A Chain A, Crystal Structure Of Pde5a1 In Complex With Icarisid Ii
Length = 326
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 68 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 127
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 128 NSYIQRSEHPLAQLY 142
>pdb|1TAZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 1b
Length = 365
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIKRH-------------LTHLEI 46
+ F + V + +E GY NPYHN IHA D+ + L+ +E+
Sbjct: 53 ISRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHXFLLRTGMVHCLSEIEL 112
Query: 47 MASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
+A + AA HD +H G F I T + A +Y
Sbjct: 113 LAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVY 145
>pdb|3JWQ|A Chain A, Crystal Structure Of Chimeric Pde5/pde6 Catalytic Domain
Complexed With Sildenafil
pdb|3JWQ|B Chain B, Crystal Structure Of Chimeric Pde5/pde6 Catalytic Domain
Complexed With Sildenafil
pdb|3JWQ|C Chain C, Crystal Structure Of Chimeric Pde5/pde6 Catalytic Domain
Complexed With Sildenafil
pdb|3JWQ|D Chain D, Crystal Structure Of Chimeric Pde5/pde6 Catalytic Domain
Complexed With Sildenafil
pdb|3JWR|A Chain A, Crystal Structure Of Chimeric Pde5PDE6 CATALYTIC DOMAIN
Complexed With 3-Isobutyl-1-Methylxanthine (Ibmx) And
Pde6 Gamma-Subunit Inhibitory Peptide 70-87.
pdb|3JWR|B Chain B, Crystal Structure Of Chimeric Pde5PDE6 CATALYTIC DOMAIN
Complexed With 3-Isobutyl-1-Methylxanthine (Ibmx) And
Pde6 Gamma-Subunit Inhibitory Peptide 70-87
Length = 330
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 72 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 131
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 132 NSYIQRSEHPLAQLY 146
>pdb|3V93|A Chain A, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|B Chain B, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|C Chain C, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|D Chain D, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|E Chain E, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|F Chain F, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|G Chain G, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V93|H Chain H, Unliganded Structure Of Tcrpdec1 Catalytic Domain
pdb|3V94|A Chain A, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|B Chain B, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|C Chain C, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|D Chain D, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|E Chain E, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|F Chain F, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|G Chain G, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
pdb|3V94|H Chain H, Tcrpdec1 Catalytic Domain In Complex With Inhibitor Wyq16
Length = 345
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 12 WKLFSLIEEGYHGTNPYHNSIHATDIKR--------------HLTHLEIMASLLAAVAHD 57
W E + NPYHN+IHA D+ + HLT LE A+ AA+ HD
Sbjct: 82 WAFLVAAVENNYRPNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKAAAFAALTHD 141
Query: 58 LDHPGVNQPFLIATSNHLA 76
+ HPG FL A + ++
Sbjct: 142 VCHPGRTNAFLAAVQDPVS 160
>pdb|3B2R|A Chain A, Crystal Structure Of Pde5a1 Catalytic Domain In Complex
With Vardenafil
pdb|3B2R|B Chain B, Crystal Structure Of Pde5a1 Catalytic Domain In Complex
With Vardenafil
Length = 330
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18 IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
+++ Y YHN HA + I+ LT LEI+A L+AA++HDLDH GVN
Sbjct: 72 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 131
Query: 65 QPFLIATSNHLAALY 79
++ + + LA LY
Sbjct: 132 NSYIQRSEHPLAQLY 146
>pdb|2R8Q|A Chain A, Structure Of Lmjpdeb1 In Complex With Ibmx
pdb|2R8Q|B Chain B, Structure Of Lmjpdeb1 In Complex With Ibmx
Length = 359
Score = 42.7 bits (99), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 13/65 (20%)
Query: 27 PYHNSIHATDI-------------KRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSN 73
PYHN H D+ LT LE L+ A+ HDLDH GVN F + T +
Sbjct: 98 PYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHMGVNNSFYLKTDS 157
Query: 74 HLAAL 78
L L
Sbjct: 158 PLGIL 162
>pdb|3QI3|A Chain A, Crystal Structure Of Pde9a(Q453e) In Complex With
Inhibitor Bay73-6691
pdb|3QI3|B Chain B, Crystal Structure Of Pde9a(Q453e) In Complex With
Inhibitor Bay73-6691
pdb|3QI4|A Chain A, Crystal Structure Of Pde9a(Q453e) In Complex With Ibmx
pdb|3QI4|B Chain B, Crystal Structure Of Pde9a(Q453e) In Complex With Ibmx
Length = 533
Score = 42.0 bits (97), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4 FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
F+++ V + + + + Y NP+HN H ++ + +I+ +
Sbjct: 228 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 286
Query: 51 LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
AA+ HDLDHPG N + I LA Y
Sbjct: 287 TAAICHDLDHPGYNNTYQINARTELAVRY 315
>pdb|2YY2|A Chain A, Crystal Structure Of The Human Phosphodiesterase 9a
Catalytic Domain Complexed With Ibmx
pdb|2YY2|B Chain B, Crystal Structure Of The Human Phosphodiesterase 9a
Catalytic Domain Complexed With Ibmx
Length = 333
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4 FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
F+++ V + + + + Y NP+HN H ++ + +I+ +
Sbjct: 55 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 113
Query: 51 LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
AA+ HDLDHPG N + I LA Y
Sbjct: 114 TAAICHDLDHPGYNNTYQINARTELAVRY 142
>pdb|2HD1|A Chain A, Crystal Structure Of Pde9 In Complex With Ibmx
pdb|2HD1|B Chain B, Crystal Structure Of Pde9 In Complex With Ibmx
pdb|3K3E|A Chain A, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With (R)-Bay73-6691
pdb|3K3E|B Chain B, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With (R)-Bay73-6691
pdb|3K3H|A Chain A, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With (S)-Bay73-6691
pdb|3K3H|B Chain B, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With (S)-Bay73-6691
pdb|4GH6|A Chain A, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With Inhibitor 28
pdb|4GH6|B Chain B, Crystal Structure Of The Pde9a Catalytic Domain In Complex
With Inhibitor 28
Length = 326
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4 FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
F+++ V + + + + Y NP+HN H ++ + +I+ +
Sbjct: 48 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 106
Query: 51 LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
AA+ HDLDHPG N + I LA Y
Sbjct: 107 TAAICHDLDHPGYNNTYQINARTELAVRY 135
>pdb|3N3Z|A Chain A, Crystal Structure Of Pde9a (E406a) Mutant In Complex With
Ibmx
pdb|3N3Z|B Chain B, Crystal Structure Of Pde9a (E406a) Mutant In Complex With
Ibmx
Length = 326
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4 FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
F+++ V + + + + Y NP+HN H ++ + +I+ +
Sbjct: 48 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 106
Query: 51 LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
AA+ HDLDHPG N + I LA Y
Sbjct: 107 TAAICHDLDHPGYNNTYQINARTELAVRY 135
>pdb|3DY8|A Chain A, Human Phosphodiesterase 9 In Complex With Product 5'-gmp
(e+p Complex)
pdb|3DY8|B Chain B, Human Phosphodiesterase 9 In Complex With Product 5'-gmp
(e+p Complex)
pdb|3DYL|A Chain A, Human Phosphdiesterase 9 Substrate Complex (Es Complex)
pdb|3DYL|B Chain B, Human Phosphdiesterase 9 Substrate Complex (Es Complex)
pdb|3DYN|A Chain A, Human Phosphodiestrase 9 In Complex With Cgmp (Zn
Inhibited)
pdb|3DYN|B Chain B, Human Phosphodiestrase 9 In Complex With Cgmp (Zn
Inhibited)
pdb|3DYQ|A Chain A, Human Phosphodiestrase 9 (Inhibited By Omitting Divalent
Cation) In Complex With Cgmp
pdb|3DYQ|B Chain B, Human Phosphodiestrase 9 (Inhibited By Omitting Divalent
Cation) In Complex With Cgmp
pdb|3DYS|A Chain A, Human Phosphodiestrase-5'gmp Complex (Ep), Produced By
Soaking With 20mm Cgmp+20 Mm Mncl2+20 Mm Mgcl2 For 2
Hours, And Flash-Cooled To Liquid Nitrogen Temperature
When Substrate Was Still Abudant.
pdb|3DYS|B Chain B, Human Phosphodiestrase-5'gmp Complex (Ep), Produced By
Soaking With 20mm Cgmp+20 Mm Mncl2+20 Mm Mgcl2 For 2
Hours, And Flash-Cooled To Liquid Nitrogen Temperature
When Substrate Was Still Abudant.
pdb|3JSI|A Chain A, Human Phosphodiesterase 9 In Complex With Inhibitor
pdb|3JSI|B Chain B, Human Phosphodiesterase 9 In Complex With Inhibitor
pdb|3JSW|A Chain A, Human Pde9 In Complex With Selective Inhibitor
pdb|3JSW|B Chain B, Human Pde9 In Complex With Selective Inhibitor
pdb|4E90|A Chain A, Human Phosphodiesterase 9 In Complex With Inhibitors
pdb|4E90|B Chain B, Human Phosphodiesterase 9 In Complex With Inhibitors
Length = 329
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4 FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
F+++ V + + + + Y NP+HN H ++ + +I+ +
Sbjct: 51 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 109
Query: 51 LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
AA+ HDLDHPG N + I LA Y
Sbjct: 110 TAAICHDLDHPGYNNTYQINARTELAVRY 138
>pdb|1SO2|A Chain A, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With A Dihydropyridazine Inhibitor
pdb|1SO2|B Chain B, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With A Dihydropyridazine Inhibitor
pdb|1SO2|C Chain C, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With A Dihydropyridazine Inhibitor
pdb|1SO2|D Chain D, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With A Dihydropyridazine Inhibitor
pdb|1SOJ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|B Chain B, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|C Chain C, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|D Chain D, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|E Chain E, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|F Chain F, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|G Chain G, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|H Chain H, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|J Chain J, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|K Chain K, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|L Chain L, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
pdb|1SOJ|I Chain I, Catalytic Domain Of Human Phosphodiesterase 3b In Complex
With Ibmx
Length = 420
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 37 IKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
+ ++ LE+MA +AA HD DHPG FL+AT+ A LY
Sbjct: 149 LSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLY 191
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDI 37
+E F + + F +E GY PYHN IHATD+
Sbjct: 57 LEIFKIPTQQFMNYFRALENGYRDI-PYHNRIHATDV 92
>pdb|3HQY|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
pdb|3HQZ|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
pdb|3HR1|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
Length = 380
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 109 PYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 168
Query: 76 AALY 79
AALY
Sbjct: 169 AALY 172
>pdb|3HQW|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
Length = 376
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 105 PYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 164
Query: 76 AALY 79
AALY
Sbjct: 165 AALY 168
>pdb|2O8H|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|2OVV|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|2OVY|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|3QPN|A Chain A, Structure Of Pde10-Inhibitor Complex
pdb|3QPO|A Chain A, Structure Of Pde10-Inhibitor Complex
pdb|3QPP|A Chain A, Structure Of Pde10-Inhibitor Complex
Length = 362
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 91 PYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 150
Query: 76 AALY 79
AALY
Sbjct: 151 AALY 154
>pdb|4AEL|A Chain A, Pde10a In Complex With The Inhibitor Az5
pdb|4AEL|B Chain B, Pde10a In Complex With The Inhibitor Az5
Length = 344
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 78 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 137
Query: 76 AALY 79
AALY
Sbjct: 138 AALY 141
>pdb|4DDL|A Chain A, Pde10a Crystal Structure Complexed With Novel Inhibitor
pdb|4DDL|B Chain B, Pde10a Crystal Structure Complexed With Novel Inhibitor
Length = 338
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 72 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 131
Query: 76 AALY 79
AALY
Sbjct: 132 AALY 135
>pdb|3SN7|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SN7|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNI|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNI|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNL|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNL|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|4FCB|A Chain A, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCB|B Chain B, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCD|A Chain A, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCD|B Chain B, Potent And Selective Phosphodiesterase 10a Inhibitors
Length = 345
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 79 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 138
Query: 76 AALY 79
AALY
Sbjct: 139 AALY 142
>pdb|4HEU|A Chain A, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
((1-(3-(4-
((1h-Benzo[d]imidazol-2-Yl)amino)phenoxy)pyridin-2-
Yl)piperidin-4- Yl)methanol)
pdb|4HEU|B Chain B, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
((1-(3-(4-
((1h-Benzo[d]imidazol-2-Yl)amino)phenoxy)pyridin-2-
Yl)piperidin-4- Yl)methanol)
pdb|4HF4|A Chain A, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
(1-(1-(3-(4-
(Benzo[d]thiazol-2-Ylamino)phenoxy)pyrazin-2-
Yl)piperidin-4-Yl) Ethanol)
pdb|4HF4|B Chain B, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
(1-(1-(3-(4-
(Benzo[d]thiazol-2-Ylamino)phenoxy)pyrazin-2-
Yl)piperidin-4-Yl) Ethanol)
Length = 318
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 72 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 131
Query: 76 AALY 79
AALY
Sbjct: 132 AALY 135
>pdb|2WEY|A Chain A, Human Pde-Papaverine Complex Obtained By Ligand Soaking Of
Cross-Linked Protein Crystals
pdb|2WEY|B Chain B, Human Pde-Papaverine Complex Obtained By Ligand Soaking Of
Cross-Linked Protein Crystals
Length = 343
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 77 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 136
Query: 76 AALY 79
AALY
Sbjct: 137 AALY 140
>pdb|2Y0J|A Chain A, Triazoloquinazolines As A Novel Class Of Phosphodiesterase
10a (Pde10a) Inhibitors, Part 2, Lead-Optimisation.
pdb|2Y0J|B Chain B, Triazoloquinazolines As A Novel Class Of Phosphodiesterase
10a (Pde10a) Inhibitors, Part 2, Lead-Optimisation
Length = 340
Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 82 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 141
Query: 76 AALY 79
AALY
Sbjct: 142 AALY 145
>pdb|2OUR|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Camp
pdb|2OUR|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Camp
pdb|2OUS|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a
pdb|2OUS|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a
pdb|2OUU|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Cgmp
pdb|2OUU|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Cgmp
Length = 331
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 78 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 137
Query: 76 AALY 79
AALY
Sbjct: 138 AALY 141
>pdb|3LXG|A Chain A, Crystal Structure Of Rat Phosphodiesterase 10a In Complex
Wi Web-3
Length = 308
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 61 PYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 120
Query: 76 AALY 79
AALY
Sbjct: 121 AALY 124
>pdb|2OUN|A Chain A, Crystal Structure Of Pde10a2 In Complex With Amp
pdb|2OUN|B Chain B, Crystal Structure Of Pde10a2 In Complex With Amp
pdb|2OUP|A Chain A, Crystal Structure Of Pde10a
pdb|2OUP|B Chain B, Crystal Structure Of Pde10a
pdb|2OUQ|A Chain A, Crystal Structure Of Pde10a2 In Complex With Gmp
pdb|2OUQ|B Chain B, Crystal Structure Of Pde10a2 In Complex With Gmp
Length = 331
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 78 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 137
Query: 76 AALY 79
AALY
Sbjct: 138 AALY 141
>pdb|4DFF|A Chain A, The Sar Development Of Dihydroimidazoisoquinoline
Derivatives As Phosphodiesterase 10a Inhibitors For The
Treatment Of Schizophrenia
pdb|4DFF|B Chain B, The Sar Development Of Dihydroimidazoisoquinoline
Derivatives As Phosphodiesterase 10a Inhibitors For The
Treatment Of Schizophrenia
Length = 352
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 86 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 145
Query: 76 AALY 79
AALY
Sbjct: 146 AALY 149
>pdb|3UI7|A Chain A, Discovery Of Orally Active Pyrazoloquinoline As A Potent
Pde10 Inhibitor For The Management Of Schizophrenia
pdb|3UI7|B Chain B, Discovery Of Orally Active Pyrazoloquinoline As A Potent
Pde10 Inhibitor For The Management Of Schizophrenia
Length = 333
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 86 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 145
Query: 76 AALY 79
AALY
Sbjct: 146 AALY 149
>pdb|3UUO|A Chain A, The Discovery Of Potent, Selectivity, And Orally
Bioavailable Pyrozoloquinolines As Pde10 Inhibitors For
The Treatment Of Schizophrenia
pdb|3UUO|B Chain B, The Discovery Of Potent, Selectivity, And Orally
Bioavailable Pyrozoloquinolines As Pde10 Inhibitors For
The Treatment Of Schizophrenia
Length = 337
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + HDLDH G + +L + L
Sbjct: 90 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPL 149
Query: 76 AALY 79
AALY
Sbjct: 150 AALY 153
>pdb|2OUV|A Chain A, Crystal Structure Of Pde10a2 Mutant Of D564n
pdb|2OUV|B Chain B, Crystal Structure Of Pde10a2 Mutant Of D564n
pdb|2OUY|A Chain A, Crystal Structure Of Pde10a2 Mutant D564a In Complex With
Camp.
pdb|2OUY|B Chain B, Crystal Structure Of Pde10a2 Mutant D564a In Complex With
Camp
Length = 331
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 27 PYHNSIHATDIKRHL-----------THLEIMASLLAAVAHDLDHPGVNQPFLIATSNHL 75
PYHN HA + + T LE L+A + H+LDH G + +L + L
Sbjct: 78 PYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHNLDHRGFSNSYLQKFDHPL 137
Query: 76 AALY 79
AALY
Sbjct: 138 AALY 141
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 54 VAHDLDHPGVNQPFLIATSNHLAALY 79
V+H L+ V +PF IAT+ HL+ L+
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLH 548
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 54 VAHDLDHPGVNQPFLIATSNHLAALY 79
++H L+ V +PF+IAT+ HL+ ++
Sbjct: 511 ISHWLNTHAVVEPFVIATNRHLSVVH 536
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168
pdb|2E8Y|B Chain B, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168
pdb|2E8Z|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168 Complexed With Alpha-Cyclodextrin
pdb|2E8Z|B Chain B, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168 Complexed With Alpha-Cyclodextrin
pdb|2E9B|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168 Complexed With Maltose
pdb|2E9B|B Chain B, Crystal Structure Of Pullulanase Type I From Bacillus
Subtilis Str. 168 Complexed With Maltose
Length = 718
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDH 60
E F DV + +L SL +P A DI+RHL L + L+A +DLD
Sbjct: 597 ETFKEDVHYIRRLISL-----RKAHPAFRLRSAADIQRHLECLTLKEHLIAYRLYDLDE 650
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,648,229
Number of Sequences: 62578
Number of extensions: 87865
Number of successful extensions: 298
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 183
Number of HSP's gapped (non-prelim): 80
length of query: 80
length of database: 14,973,337
effective HSP length: 49
effective length of query: 31
effective length of database: 11,907,015
effective search space: 369117465
effective search space used: 369117465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)