Query psy17172
Match_columns 80
No_of_seqs 135 out of 687
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 23:43:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ecm_A High affinity CAMP-spec 100.0 6.1E-33 2.1E-37 202.4 8.3 79 2-80 48-139 (338)
2 3itu_A CGMP-dependent 3',5'-cy 100.0 1E-32 3.5E-37 202.2 8.3 79 1-80 55-146 (345)
3 1y2k_A DPDE3, PDE43, CAMP-spec 100.0 1E-32 3.5E-37 202.1 8.3 79 2-80 69-160 (349)
4 3dyn_A High affinity CGMP-spec 100.0 1E-32 3.5E-37 201.2 8.1 79 1-80 48-139 (329)
5 1tbf_A CGMP-specific 3',5'-cyc 100.0 1.3E-32 4.6E-37 201.6 8.5 80 1-80 73-165 (347)
6 1zkl_A HCP1, TM22, high-affini 100.0 1.3E-32 4.5E-37 201.9 8.4 79 2-80 56-147 (353)
7 1f0j_A PDE4B, phosphodiesteras 100.0 1.4E-32 4.8E-37 203.4 8.4 79 2-80 56-147 (377)
8 2our_A CAMP and CAMP-inhibited 100.0 2.1E-32 7.1E-37 199.4 8.8 79 1-80 53-142 (331)
9 3g4g_A DPDE3, PDE43, CAMP-spec 100.0 3.3E-32 1.1E-36 203.8 8.2 80 1-80 134-226 (421)
10 2r8q_A Class I phosphodiestera 100.0 3.6E-32 1.2E-36 200.0 7.6 78 2-80 74-164 (359)
11 3hr1_A CAMP and CAMP-inhibited 100.0 5.8E-32 2E-36 200.4 8.7 79 1-80 84-173 (380)
12 1taz_A Calcium/calmodulin-depe 100.0 4.8E-32 1.7E-36 199.7 7.8 79 2-80 54-146 (365)
13 1so2_A CGMP-inhibited 3',5'-cy 100.0 9.6E-32 3.3E-36 201.2 8.1 78 2-80 58-192 (420)
14 3ibj_A CGMP-dependent 3',5'-cy 100.0 1E-31 3.4E-36 206.6 6.3 79 1-80 416-507 (691)
15 3qi3_A High affinity CGMP-spec 100.0 4E-31 1.4E-35 202.3 8.4 79 1-80 225-316 (533)
16 3v93_A Cyclic nucleotide speci 100.0 5E-31 1.7E-35 193.2 8.3 77 2-80 74-164 (345)
17 3bjc_A CGMP-specific 3',5'-cyc 100.0 8.3E-30 2.8E-34 201.1 6.6 79 2-80 589-680 (878)
18 2qgs_A Protein Se1688; alpha-h 95.5 0.015 5.1E-07 39.3 4.1 45 18-62 14-65 (225)
19 3dto_A BH2835 protein; all alp 95.5 0.016 5.3E-07 39.7 4.1 53 10-62 6-64 (223)
20 3irh_A HD domain protein; phos 95.5 0.0065 2.2E-07 46.3 2.3 26 42-67 120-145 (480)
21 2pjq_A Uncharacterized protein 95.4 0.0092 3.2E-07 40.6 2.7 56 6-61 7-68 (231)
22 3b57_A LIN1889 protein; Q92AN1 95.4 0.013 4.3E-07 39.2 3.4 51 11-61 6-63 (209)
23 3djb_A Hydrolase, HD family; a 94.9 0.012 4.1E-07 40.2 2.1 53 11-63 7-65 (223)
24 2pq7_A Predicted HD superfamil 94.8 0.032 1.1E-06 37.2 3.9 43 18-60 22-70 (220)
25 3u1n_A SAM domain and HD domai 94.7 0.032 1.1E-06 42.9 4.2 41 28-68 63-120 (528)
26 2q14_A Phosphohydrolase; BT420 94.5 0.028 9.6E-07 41.8 3.4 27 41-67 81-107 (410)
27 2pgs_A Putative deoxyguanosine 92.7 0.07 2.4E-06 40.1 2.9 21 48-68 101-121 (451)
28 3gw7_A Uncharacterized protein 92.3 0.016 5.3E-07 40.1 -1.1 36 25-60 21-62 (239)
29 3bg2_A DGTP triphosphohydrolas 92.2 0.09 3.1E-06 39.5 2.9 21 47-67 107-127 (444)
30 2hek_A Hypothetical protein; p 91.1 0.15 5.1E-06 37.2 3.0 40 26-67 47-95 (371)
31 3ccg_A HD superfamily hydrolas 86.9 1.2 4.1E-05 28.8 4.8 52 7-68 4-64 (190)
32 2dqb_A Deoxyguanosinetriphosph 86.2 0.34 1.2E-05 35.6 2.0 30 32-62 78-114 (376)
33 2o08_A BH1327 protein; putativ 82.9 1.3 4.4E-05 28.6 3.5 37 29-68 18-63 (188)
34 2ogi_A Hypothetical protein SA 82.2 1.4 4.9E-05 28.7 3.6 37 29-68 26-71 (196)
35 3tm8_A BD1817, uncharacterized 79.8 0.85 2.9E-05 32.2 2.0 38 26-64 164-211 (328)
36 3kq5_A Hypothetical cytosolic 72.1 3.1 0.00011 30.9 3.2 20 42-61 99-118 (393)
37 1vqr_A Hypothetical protein CJ 65.4 2.6 9E-05 28.9 1.6 36 30-65 125-167 (297)
38 3nqw_A CG11900; stringent resp 60.9 3.2 0.00011 27.1 1.3 32 25-58 30-64 (179)
39 3i7a_A Putative metal-dependen 58.7 2.8 9.6E-05 28.6 0.7 32 30-61 118-162 (281)
40 3nr1_A HD domain-containing pr 55.7 5.1 0.00018 26.1 1.6 32 25-58 28-62 (178)
41 3hc1_A Uncharacterized HDOD do 42.4 4.3 0.00015 28.0 -0.5 35 31-65 120-161 (305)
42 1vj7_A Bifunctional RELA/SPOT; 42.2 15 0.00053 26.9 2.5 32 25-58 47-79 (393)
43 3iz6_U 40S ribosomal protein S 37.8 7.2 0.00025 25.0 0.1 24 57-80 31-54 (138)
44 2ibn_A Inositol oxygenase; red 37.5 10 0.00035 26.5 0.9 34 25-60 55-92 (250)
45 3rf0_A Exopolyphosphatase; str 34.6 43 0.0015 21.9 3.6 45 10-59 5-64 (209)
46 3ljx_A MMOQ response regulator 34.3 7.6 0.00026 26.6 -0.2 32 31-62 110-148 (288)
47 3m5f_A Metal dependent phospho 29.8 29 0.00098 24.1 2.1 22 47-68 57-80 (244)
48 3u5c_Y RP50, 40S ribosomal pro 29.4 7.7 0.00026 24.8 -0.8 24 57-80 26-49 (135)
49 2wp7_A PPPDE peptidase domain- 29.0 34 0.0012 22.3 2.2 34 4-38 77-115 (168)
50 2cqz_A 177AA long hypothetical 28.9 17 0.00057 23.4 0.7 34 26-59 29-73 (177)
51 2v94_A RPS24, 30S ribosomal pr 28.6 8.8 0.0003 23.4 -0.6 24 57-80 30-53 (107)
52 2g1d_A 30S ribosomal protein S 27.3 6.6 0.00023 23.6 -1.3 23 57-79 22-44 (98)
53 3m1t_A Putative phosphohydrola 22.2 17 0.00059 24.6 -0.2 32 30-62 106-144 (275)
54 2paq_A 5'-deoxynucleotidase YF 22.2 31 0.0011 22.7 1.1 16 44-59 58-73 (201)
55 2xzm_P RPS24E; ribosome, trans 22.1 14 0.00047 24.0 -0.6 24 57-80 24-47 (149)
56 2heo_A Z-DNA binding protein 1 20.9 64 0.0022 17.1 2.1 19 2-20 33-51 (67)
No 1
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} SCOP: a.211.1.0 PDB: 3ecn_A*
Probab=99.98 E-value=6.1e-33 Score=202.39 Aligned_cols=79 Identities=38% Similarity=0.691 Sum_probs=75.9
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 48 ~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~~e~~all~Aal~HD~~HpG~nN~fl 127 (338)
T 3ecm_A 48 EFLHCSESTLRSWLQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAALIAATIHDVDHPGRTNSFL 127 (338)
T ss_dssp HHHTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHHhccCCCCccchHH
Confidence 5799999999999999999998679999999999999 478999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++||
T Consensus 128 i~~~s~LA~lYn 139 (338)
T 3ecm_A 128 CNAGSELAILYN 139 (338)
T ss_dssp HHTTCHHHHHTT
T ss_pred HHhCCHHHHHcC
Confidence 999999999997
No 2
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=99.97 E-value=1e-32 Score=202.16 Aligned_cols=79 Identities=34% Similarity=0.693 Sum_probs=75.9
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 55 ~~~f~i~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAal~HDv~HpG~nN~f 133 (345)
T 3itu_A 55 INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSF 133 (345)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTCC-CCSSSSHHHHHHHHHHHHHHHHHHCGGGTSCHHHHHHHHHHHHHTTTTCCSCCHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHccC-CCCCcCcHHHHHHHHHHHHHHhccchhhhhhHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 36899999999999999999998 89999999999998 47899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 134 li~t~s~LA~lYn 146 (345)
T 3itu_A 134 QVASKSVLAALYS 146 (345)
T ss_dssp HHHTTCHHHHHHT
T ss_pred HHhcCCHHHHHhC
Confidence 9999999999997
No 3
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=99.97 E-value=1e-32 Score=202.08 Aligned_cols=79 Identities=41% Similarity=0.735 Sum_probs=76.0
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 69 ~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl 148 (349)
T 1y2k_A 69 KTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFL 148 (349)
T ss_dssp HHTTCCHHHHHHHHHHHHHTSCTTCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhhhhHHhhcCHHHHHHHHHHHHhccCCCCCCCcHHH
Confidence 5799999999999999999998789999999999998 368999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++||
T Consensus 149 i~t~s~LA~lYn 160 (349)
T 1y2k_A 149 INTNSELALMYN 160 (349)
T ss_dssp HHTTCHHHHHHT
T ss_pred HhcCCHHHHHcC
Confidence 999999999997
No 4
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=99.97 E-value=1e-32 Score=201.16 Aligned_cols=79 Identities=29% Similarity=0.602 Sum_probs=75.8
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 48 ~~~f~i~~~~L~~fl~~v~~~Y~-~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~le~~alliAal~HDv~HpG~nN~f 126 (329)
T 3dyn_A 48 VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTY 126 (329)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHSC-CCSSSSHHHHHHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred hHhcCCCHHHHHHHHHHHHHhcC-CCCCcCcHHHhHHHHHHHHHHHhhhHhhcCCHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 36899999999999999999998 99999999999998 46899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 127 li~t~s~LA~lYn 139 (329)
T 3dyn_A 127 QINARTELAVRYN 139 (329)
T ss_dssp HHHHTCHHHHHHT
T ss_pred HHHhCCHHHHHcC
Confidence 9999999999997
No 5
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=99.97 E-value=1.3e-32 Score=201.56 Aligned_cols=80 Identities=39% Similarity=0.658 Sum_probs=76.4
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 73 ~~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~~N~f 152 (347)
T 1tbf_A 73 VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQF 152 (347)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred HhhcCCCHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHHcccccccCCHHHHHHHHHHHHHccCCCCCCCCch
Confidence 36799999999999999999998679999999999998 47899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 153 li~~~s~LA~lYn 165 (347)
T 1tbf_A 153 LINTNSELALMYN 165 (347)
T ss_dssp HHHTTCHHHHHTT
T ss_pred HHhcCCHHHHHcC
Confidence 9999999999997
No 6
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=99.97 E-value=1.3e-32 Score=201.93 Aligned_cols=79 Identities=52% Similarity=0.953 Sum_probs=75.7
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 56 ~~f~i~~~~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl 135 (353)
T 1zkl_A 56 EYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPGVNQPFL 135 (353)
T ss_dssp HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTCCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHccCCCCCCcCHHHHHHHHHHHHHHHhhhHHhhhCCHHHHHHHHHHHHHhccCCCCCCcHHH
Confidence 5799999999999999999995599999999999998 478999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++||
T Consensus 136 i~~~s~LA~lYn 147 (353)
T 1zkl_A 136 IKTNHYLATLYK 147 (353)
T ss_dssp HHTTCHHHHHTT
T ss_pred HhcCCHHHHHcC
Confidence 999999999997
No 7
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=99.97 E-value=1.4e-32 Score=203.35 Aligned_cols=79 Identities=41% Similarity=0.722 Sum_probs=76.0
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 56 ~~f~i~~~~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDvdHpG~nN~fl 135 (377)
T 1f0j_A 56 KTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFL 135 (377)
T ss_dssp HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhcchhhhhCCHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 5799999999999999999998789999999999998 368999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++||
T Consensus 136 i~t~s~LA~lYn 147 (377)
T 1f0j_A 136 INTNSELALMYN 147 (377)
T ss_dssp HHTTCHHHHHTT
T ss_pred HhcCCHHHHHcC
Confidence 999999999997
No 8
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=99.97 E-value=2.1e-32 Score=199.36 Aligned_cols=79 Identities=30% Similarity=0.518 Sum_probs=75.9
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-----------hhchHHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-----------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLI 69 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-----------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~ 69 (80)
+++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|++
T Consensus 53 ~~~f~i~~~~L~~fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~l~~le~~alliAAl~HDv~HpG~~N~fli 131 (331)
T 2our_A 53 CGTSCFELEKLCRFIMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQ 131 (331)
T ss_dssp HCTTSSCHHHHHHHHHHHHHTSC-SCSSSSHHHHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCCCCCCcHHH
Confidence 36799999999999999999998 99999999999999 3789999999999999999999999999999
Q ss_pred hhcChhHHhcC
Q psy17172 70 ATSNHLAALYE 80 (80)
Q Consensus 70 ~t~~~LA~lYn 80 (80)
++++|||++||
T Consensus 132 ~~~~~LA~lYn 142 (331)
T 2our_A 132 KFDHPLAALYS 142 (331)
T ss_dssp HTTCHHHHHSC
T ss_pred hcCCHHHHhcC
Confidence 99999999997
No 9
>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A*
Probab=99.97 E-value=3.3e-32 Score=203.81 Aligned_cols=80 Identities=40% Similarity=0.738 Sum_probs=76.4
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 134 ~~~f~I~~~~L~~FL~~ve~~Y~~~~pYHN~~HA~dV~Q~~~~ll~~~~l~~~ls~le~lalliAAl~HDvdHpG~nN~F 213 (421)
T 3g4g_A 134 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQF 213 (421)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTSCSSCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred HhhcCCCHHHHHHHHHHHHHcccCCCCCcCcHHHhHHHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 36899999999999999999998789999999999998 47899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 214 li~t~s~LA~lYn 226 (421)
T 3g4g_A 214 LINTNSELALMYN 226 (421)
T ss_dssp HHHTTCHHHHHHT
T ss_pred HHHcCCHHHHHcC
Confidence 9999999999997
No 10
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=99.97 E-value=3.6e-32 Score=199.97 Aligned_cols=78 Identities=35% Similarity=0.520 Sum_probs=75.2
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 74 ~~f~i~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl 152 (359)
T 2r8q_A 74 EKFGCREQTLLNFILQCRRRYR-RVPYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHMGVNNSFY 152 (359)
T ss_dssp HHTTCCHHHHHHHHHHHHHTCC-SCSSSSHHHHHHHHHHHHHHHHTSCGGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHhCC-CCccccHHHHHHHHHHHHHHHHcccchhcccHHHHHHHHHHHHHhcCCCCCCCchHh
Confidence 5799999999999999999998 89999999999998 478999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++||
T Consensus 153 i~~~s~LA~lYn 164 (359)
T 2r8q_A 153 LKTDSPLGILSS 164 (359)
T ss_dssp HHTTCHHHHHHH
T ss_pred HhcCCHHHHHcC
Confidence 999999999996
No 11
>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A*
Probab=99.97 E-value=5.8e-32 Score=200.38 Aligned_cols=79 Identities=30% Similarity=0.515 Sum_probs=76.0
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-----------hhchHHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-----------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLI 69 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-----------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~ 69 (80)
+++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|++
T Consensus 84 ~~~f~I~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~lt~le~~alliAAl~HDvdHpG~nN~Fli 162 (380)
T 3hr1_A 84 CGTSCFELEKLCRFIMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQ 162 (380)
T ss_dssp HCTTSSCHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHccC-CCCCcCcHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 36899999999999999999998 89999999999999 4789999999999999999999999999999
Q ss_pred hhcChhHHhcC
Q psy17172 70 ATSNHLAALYE 80 (80)
Q Consensus 70 ~t~~~LA~lYn 80 (80)
++++|||++||
T Consensus 163 ~t~s~LA~lYn 173 (380)
T 3hr1_A 163 KFDHPLAALYS 173 (380)
T ss_dssp HHTCHHHHHCS
T ss_pred HhCCHHHHHcC
Confidence 99999999997
No 12
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=99.97 E-value=4.8e-32 Score=199.72 Aligned_cols=79 Identities=35% Similarity=0.681 Sum_probs=75.7
Q ss_pred cccccCHHHHHHHHHHHHhhCCC-CCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~-~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
++|+||.++|.+|+..|+++|++ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 54 ~~f~i~~~~L~~Fl~~v~~~Y~~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~f 133 (365)
T 1taz_A 54 SRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSF 133 (365)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHTTTCCSSSSHHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred HhcCCCHHHHHHHHHHHHHhcCcCCCCCcCHHHHHHHHHHHHHHHHhhhHHhhCCHHHHHHHHHHHHHhcCCCCCCccHH
Confidence 57999999999999999999984 79999999999998 47899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 134 li~t~s~LA~lYn 146 (365)
T 1taz_A 134 HIQTKSECAIVYN 146 (365)
T ss_dssp HHHHTCHHHHHHT
T ss_pred HHhcCChHHHHcC
Confidence 9999999999997
No 13
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Probab=99.97 E-value=9.6e-32 Score=201.17 Aligned_cols=78 Identities=44% Similarity=0.744 Sum_probs=73.3
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhhh------------------------------------------
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR------------------------------------------ 39 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~------------------------------------------ 39 (80)
++|+||.++|.+|+..|+++|+ +|||||+.||+||++
T Consensus 58 ~~f~I~~~~L~~Fl~~v~~~Y~-~nPYHN~~HA~DV~Q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 136 (420)
T 1so2_A 58 EIFKIPTQQFMNYFRALENGYR-DIPYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISS 136 (420)
T ss_dssp HHTTCCHHHHHHHHHHHHTTSC-SCSSSSHHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCC
T ss_pred HhcCCCHHHHHHHHHHHHHhCC-CCCCcCHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccchhhhhc
Confidence 5799999999999999999998 899999999999972
Q ss_pred ---------------hchHHHHHHHHHHHHHhcCCCCCCchHHHHhhcChhHHhcC
Q psy17172 40 ---------------HLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80 (80)
Q Consensus 40 ---------------~l~~~~~~a~l~aal~HDv~HpG~~N~fl~~t~~~LA~lYn 80 (80)
.++++|++|+++||+|||+||||+||.|++++++|||++||
T Consensus 137 k~~~~~~~~~g~l~~~l~~lE~lAlliAAl~HDvdHpG~nN~Flv~t~spLA~lYn 192 (420)
T 1so2_A 137 KSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYN 192 (420)
T ss_dssp TTCCCSSTTEECGGGTSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHTT
T ss_pred ccccccccccchhhhccCHHHHHHHHHHHHHhcCCCCCCCCchhhhcCChHHHHhC
Confidence 14589999999999999999999999999999999999997
No 14
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=206.62 Aligned_cols=79 Identities=34% Similarity=0.693 Sum_probs=76.3
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..++++|+ +||||||.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 416 ~~~~~i~~~~l~~fl~~v~~~y~-~~pyHN~~Ha~dv~q~~~~~~~~~~~~~~~~~~e~~a~~~aa~~HD~~H~G~~N~f 494 (691)
T 3ibj_A 416 INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSF 494 (691)
T ss_dssp TTTTTCCHHHHHHHHHHHHHTSB-CCSSSBHHHHHHHHHHHHHHHHHHTGGGTSCHHHHHHHHHHHHHTTTTCCCCCCSC
T ss_pred hHhcCCCHHHHHHHHHHHHhcCC-CCCCcCcHHHHHHHHHHHHHHhccchhhhCCHHHHHHHHHHHHHccCCCCCCCcHH
Confidence 47899999999999999999998 89999999999998 57899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 495 ~~~~~~~la~~y~ 507 (691)
T 3ibj_A 495 QVASKSVLAALYS 507 (691)
T ss_dssp SSSSSCCGGGTTT
T ss_pred HHHhCChHHHHcC
Confidence 9999999999997
No 15
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Probab=99.97 E-value=4e-31 Score=202.27 Aligned_cols=79 Identities=29% Similarity=0.602 Sum_probs=75.8
Q ss_pred CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++|+||.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 225 ~~~f~I~~~~L~rFL~~Ve~~Y~-~nPYHN~~HA~DV~Q~~~~ll~~~~l~~~ls~lE~lAlliAAl~HDvdHPG~nN~F 303 (533)
T 3qi3_A 225 VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTY 303 (533)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHHTTGGGTSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHccC-CCCCcChHHHhHHHHHHHHHHHhccchhhccHHHHHHHHHHHHHhccCCCCCCCHH
Confidence 36899999999999999999998 99999999999998 46899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 304 li~t~spLAilYn 316 (533)
T 3qi3_A 304 QINARTELAVRYN 316 (533)
T ss_dssp HHHTTCHHHHHTT
T ss_pred HHhcCcHHHHHcC
Confidence 9999999999997
No 16
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*
Probab=99.97 E-value=5e-31 Score=193.22 Aligned_cols=77 Identities=36% Similarity=0.578 Sum_probs=72.5
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh--------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK--------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~--------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
++| ++.++|.+|+..|+++|+ +|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|
T Consensus 74 ~~~-~~~~~L~~fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~~~~l~~le~~alliAAl~HDvdHpG~nN~f 151 (345)
T 3v93_A 74 ASQ-EEAQKWAFLVAAVENNYR-PNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKAAAFAALTHDVCHPGRTNAF 151 (345)
T ss_dssp SSH-HHHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred hhh-CCHHHHHHHHHHHHHhCC-CCCCcChHHHHHHHHHHHHHHHhchHhhhcCCHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 345 788999999999999996 99999999999998 35899999999999999999999999999
Q ss_pred HHhhcChhHHhcC
Q psy17172 68 LIATSNHLAALYE 80 (80)
Q Consensus 68 l~~t~~~LA~lYn 80 (80)
++++++|||++||
T Consensus 152 li~t~s~LA~lYn 164 (345)
T 3v93_A 152 LAAVQDPVSFKFS 164 (345)
T ss_dssp HHHTTCHHHHHSC
T ss_pred HHHccchHHHhcC
Confidence 9999999999997
No 17
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=99.96 E-value=8.3e-30 Score=201.14 Aligned_cols=79 Identities=35% Similarity=0.580 Sum_probs=75.6
Q ss_pred cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
++|+||.++|.+|+..|+++|+++|||||+.||+||+ ..++++|++|+++||+|||+||||+||.|+
T Consensus 589 ~~f~i~~~~l~~fl~~v~~~Y~~~~pyHN~~Ha~dV~q~~~~~l~~~~~~~~~~~~e~~a~~~aa~~HD~~HpG~~N~f~ 668 (878)
T 3bjc_A 589 QNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVNNSYI 668 (878)
T ss_dssp HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCCTTCCTG
T ss_pred hhcCCCHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHccCCCCCCCCHHH
Confidence 5799999999999999999998679999999999998 478999999999999999999999999999
Q ss_pred HhhcChhHHhcC
Q psy17172 69 IATSNHLAALYE 80 (80)
Q Consensus 69 ~~t~~~LA~lYn 80 (80)
+++++|||++|+
T Consensus 669 ~~~~~~la~~y~ 680 (878)
T 3bjc_A 669 QRSEHPLAQLYC 680 (878)
T ss_dssp GGSSCTTHHHHC
T ss_pred HhcCCHHHHHcC
Confidence 999999999994
No 18
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=95.53 E-value=0.015 Score=39.35 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHhhCCCCCCCCChhhhhhhhhhchHH-------HHHHHHHHHHHhcCCCCC
Q psy17172 18 IEEGYHGTNPYHNSIHATDIKRHLTHL-------EIMASLLAAVAHDLDHPG 62 (80)
Q Consensus 18 i~~~Y~~~~pyHN~~Ha~dv~~~l~~~-------~~~a~l~aal~HDv~HpG 62 (80)
++.......+||++.|...|......+ +...+.+||+.||++-+-
T Consensus 14 v~~~~~~~~~~H~~~H~~rV~~~a~~i~a~~~~~d~~~l~lAAlLHDigk~~ 65 (225)
T 2qgs_A 14 MKSFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSK 65 (225)
T ss_dssp HHHHTTTCSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCS
T ss_pred HHHHHhcCCCccCHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHcCCCCC
Confidence 333333356999999999998443222 456889999999999763
No 19
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=95.48 E-value=0.016 Score=39.66 Aligned_cols=53 Identities=13% Similarity=0.165 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCCCC
Q psy17172 10 RVWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDHPG 62 (80)
Q Consensus 10 ~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~HpG 62 (80)
.+.+.-.-+++.+..+-|.|++.|...|.. .+ ...+...+.+||+.||+|-+.
T Consensus 6 ~i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AalLHDig~~k 64 (223)
T 3dto_A 6 ILQSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDK 64 (223)
T ss_dssp HHHHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC--
T ss_pred HHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccccc
Confidence 344444555666655678999999999982 11 123566789999999999653
No 20
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=95.46 E-value=0.0065 Score=46.25 Aligned_cols=26 Identities=31% Similarity=0.424 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 42 THLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 42 ~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
++.+..++.+|||+||+|||=.+=.+
T Consensus 120 ~~~~~~~v~~AaLlHDIGH~PFsH~~ 145 (480)
T 3irh_A 120 NDDERLITLCAALLHDVGHGPYSHTF 145 (480)
T ss_dssp CGGGHHHHHHHHHHTTTTCCTTHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCCccchh
Confidence 34455678899999999999554443
No 21
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=95.40 E-value=0.0092 Score=40.60 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhhhh---ch---HHHHHHHHHHHHHhcCCCC
Q psy17172 6 LDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH---LT---HLEIMASLLAAVAHDLDHP 61 (80)
Q Consensus 6 i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~~---l~---~~~~~a~l~aal~HDv~Hp 61 (80)
++...+......++..+..+-++|++.|...|... +. ..+...+.+||+.||+|-+
T Consensus 7 ~~~~~i~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~ll~lAAlLHDigk~ 68 (231)
T 2pjq_A 7 ITETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDD 68 (231)
T ss_dssp CCHHHHHHHHHHHHTSSTTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCcc
Confidence 44444444444444444336689999999999822 21 1345678999999999864
No 22
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=95.39 E-value=0.013 Score=39.17 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhCC-CCCCCCChhhhhhhhh---hch---HHHHHHHHHHHHHhcCCCC
Q psy17172 11 VWKLFSLIEEGYH-GTNPYHNSIHATDIKR---HLT---HLEIMASLLAAVAHDLDHP 61 (80)
Q Consensus 11 l~~fl~~i~~~Y~-~~~pyHN~~Ha~dv~~---~l~---~~~~~a~l~aal~HDv~Hp 61 (80)
+...+...-..|. .+-++|++.|...|.. .+. ..+...+.+||+.||+|..
T Consensus 6 li~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~v~~AAlLHDig~~ 63 (209)
T 3b57_A 6 IILSAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDI 63 (209)
T ss_dssp HHHHHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCcc
Confidence 3333333333343 3568999999999982 221 2345688999999999754
No 23
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=94.88 E-value=0.012 Score=40.16 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCCCCC
Q psy17172 11 VWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDHPGV 63 (80)
Q Consensus 11 l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~HpG~ 63 (80)
+.+.-.-+++.+..+-|.|++.|...|.. .+ ...+...+.+||+.||+|.+..
T Consensus 7 i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AAlLHDig~~k~ 65 (223)
T 3djb_A 7 IEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKL 65 (223)
T ss_dssp HHHHHHHHHHHTTSSSCTTTHHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC--C
T ss_pred HHHHHHHHHHHhhcCCCcCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccccc
Confidence 34444445555655668999999999982 11 1245678899999999987543
No 24
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=94.77 E-value=0.032 Score=37.21 Aligned_cols=43 Identities=19% Similarity=0.330 Sum_probs=30.0
Q ss_pred HHhhCCCCCCCCChhhhhhhhh---hch---HHHHHHHHHHHHHhcCCC
Q psy17172 18 IEEGYHGTNPYHNSIHATDIKR---HLT---HLEIMASLLAAVAHDLDH 60 (80)
Q Consensus 18 i~~~Y~~~~pyHN~~Ha~dv~~---~l~---~~~~~a~l~aal~HDv~H 60 (80)
+++.+....++|.+.|...|.. .+. ..+...+.+||+.||+|-
T Consensus 22 v~~~~~~~~~~h~~~H~~rV~~~a~~la~~~~~d~~~l~~AaLLHDIg~ 70 (220)
T 2pq7_A 22 REAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKR 70 (220)
T ss_dssp HHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTH
T ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCC
Confidence 3444433679999999999982 111 134567899999999954
No 25
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=94.67 E-value=0.032 Score=42.92 Aligned_cols=41 Identities=22% Similarity=0.384 Sum_probs=30.0
Q ss_pred CCC-hhhhhhhhh----------------hchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 28 YHN-SIHATDIKR----------------HLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 28 yHN-~~Ha~dv~~----------------~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
.|+ +.|+..|+. .++..+..++.+|||+||+|||=.+=.+.
T Consensus 63 ~hTRf~HSLgV~~la~~i~~~l~~~~~~~~~~~~d~~~v~~AaLlHDiGH~PFsH~~E 120 (528)
T 3u1n_A 63 SHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFD 120 (528)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTTTCBTTBHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHhhCcccCCCHHHHHHHHHHHHHhccCCCCccchhh
Confidence 466 578888871 13456667889999999999997666554
No 26
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.47 E-value=0.028 Score=41.79 Aligned_cols=27 Identities=22% Similarity=0.240 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 41 LTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 41 l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
+++.+.-.+.+|||+||+|||=.+=.+
T Consensus 81 ~~~~d~~~~~~AaLlHDiGh~PfsH~~ 107 (410)
T 2q14_A 81 IFDSEAEAVQAAILLHDIGHGPFSHVL 107 (410)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhccCCCcccccc
Confidence 455667789999999999998555433
No 27
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=92.73 E-value=0.07 Score=40.14 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=16.4
Q ss_pred HHHHHHHHhcCCCCCCchHHH
Q psy17172 48 ASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 48 a~l~aal~HDv~HpG~~N~fl 68 (80)
.+-.|||+||+|||=++=.+.
T Consensus 101 ~v~~a~L~HDiGH~PFgH~gE 121 (451)
T 2pgs_A 101 VVQSACLAHDIGNPPFGHSGE 121 (451)
T ss_dssp HHHHHHHHTTTTCCTTHHHHH
T ss_pred HHHHHHHhhccCCCCccccHH
Confidence 677899999999996554433
No 28
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=92.26 E-value=0.016 Score=40.13 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=22.7
Q ss_pred CCCCCChhhhhhhhhhc------hHHHHHHHHHHHHHhcCCC
Q psy17172 25 TNPYHNSIHATDIKRHL------THLEIMASLLAAVAHDLDH 60 (80)
Q Consensus 25 ~~pyHN~~Ha~dv~~~l------~~~~~~a~l~aal~HDv~H 60 (80)
.-++|++.|...|.... ...+...+.+||+.||++-
T Consensus 21 ~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~~~~AalLHDig~ 62 (239)
T 3gw7_A 21 QDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVS 62 (239)
T ss_dssp ------CCHHHHHHHHHHHHTTTSCSCTTHHHHHHHHTTTTC
T ss_pred CCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccc
Confidence 57899999999998321 1234567899999999975
No 29
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=92.18 E-value=0.09 Score=39.48 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=16.5
Q ss_pred HHHHHHHHHhcCCCCCCchHH
Q psy17172 47 MASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 47 ~a~l~aal~HDv~HpG~~N~f 67 (80)
-.+-.|||+||+|||=++=.+
T Consensus 107 ~lv~~a~L~HDiGH~PFgH~g 127 (444)
T 3bg2_A 107 AIVAAAALAHDIGNPPFGHSG 127 (444)
T ss_dssp HHHHHHHHHTTTTCCTTHHHH
T ss_pred HHHHHHHHhcccCCCCccccH
Confidence 477899999999999655443
No 30
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=91.08 E-value=0.15 Score=37.23 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=27.7
Q ss_pred CCCCChhhhhhhhh---------hchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172 26 NPYHNSIHATDIKR---------HLTHLEIMASLLAAVAHDLDHPGVNQPF 67 (80)
Q Consensus 26 ~pyHN~~Ha~dv~~---------~l~~~~~~a~l~aal~HDv~HpG~~N~f 67 (80)
.+-+-|.|...|+. .+++. ..+.+||++||+||.=.+-.+
T Consensus 47 a~~~r~~Hsl~V~~~a~~ia~~~~~~~~--~~~~~AaLLHDiG~~pfsh~~ 95 (371)
T 2hek_A 47 AQHTRFEHSLGVYHITERICESLKVKEK--ELVKLAGLLHDLGHPPFSHTT 95 (371)
T ss_dssp CCCBHHHHHHHHHHHHHHHHHHHTCTTH--HHHHHHHHTTTTTCCSSSSCH
T ss_pred CCCChhHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHhcCccccccch
Confidence 34677899988881 12221 578899999999997554444
No 31
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=86.87 E-value=1.2 Score=28.83 Aligned_cols=52 Identities=8% Similarity=0.014 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 7 DVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 7 ~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
+.+++..++...-+. +.+.|+..|+ ..+++. .+.+||+.||+|.......++
T Consensus 4 ~~~~~~~~l~~~~~~-------~~~~Hs~~Va~~A~~lA~~~g~d~~---~~~~AgLLHDiGk~~~~~~il 64 (190)
T 3ccg_A 4 SYDKITDYLMNNLGE-------KRYKHSLGVMDTAVRLAGIYNEDTE---KARIAGLVHDCAKKLPGEKII 64 (190)
T ss_dssp CHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTSCHHHHH
T ss_pred CHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHhcCCCCHHHHH
Confidence 345555665554443 3788999988 123332 378999999999987655444
No 32
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=86.18 E-value=0.34 Score=35.60 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=20.4
Q ss_pred hhhhhhhh-------hchHHHHHHHHHHHHHhcCCCCC
Q psy17172 32 IHATDIKR-------HLTHLEIMASLLAAVAHDLDHPG 62 (80)
Q Consensus 32 ~Ha~dv~~-------~l~~~~~~a~l~aal~HDv~HpG 62 (80)
.|...|+. .+.- +.-.+-.|||+||+|||=
T Consensus 78 ~HSl~Va~iar~ia~~l~l-~~~l~~~a~LlHDiGh~P 114 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALGL-NEDLTEAIALSHDLGHPP 114 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHhcCCCc
Confidence 78888882 1210 112567899999999993
No 33
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=82.88 E-value=1.3 Score=28.65 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=26.9
Q ss_pred CChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 29 HNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 29 HN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
+.+.|+..|+ ..+++. .+.+||+.||+|.......++
T Consensus 18 ~~~~Hs~~Va~~A~~lA~~~g~~~~---~~~~agLLHDIGk~~~~~~il 63 (188)
T 2o08_A 18 HRYQHTIGVMETAIDLAKLYGADQQ---KAELAAIFHDYAKFRDKNEMR 63 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHHcCCCCHHHHH
Confidence 5899999988 123333 378999999999987655544
No 34
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=82.22 E-value=1.4 Score=28.71 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=27.0
Q ss_pred CChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172 29 HNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL 68 (80)
Q Consensus 29 HN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl 68 (80)
+.+.|+..|+ ..+++. .+.+||+.||+|.......++
T Consensus 26 ~~~~Hs~~Va~~A~~lA~~~g~d~~---~~~~AgLLHDIGK~~~~~~il 71 (196)
T 2ogi_A 26 KRFNHVLGVERAAIELAERYGYDKE---KAGLAALLHDYAKELSDDEFL 71 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHcCCcCCHHHHH
Confidence 4889999988 123332 378999999999987665544
No 35
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=79.79 E-value=0.85 Score=32.21 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=29.0
Q ss_pred CCCCChhhhhhhh---------hhchHHHHHH-HHHHHHHhcCCCCCCc
Q psy17172 26 NPYHNSIHATDIK---------RHLTHLEIMA-SLLAAVAHDLDHPGVN 64 (80)
Q Consensus 26 ~pyHN~~Ha~dv~---------~~l~~~~~~a-~l~aal~HDv~HpG~~ 64 (80)
.+| .+.|+..|+ -.+++.++.. +.+||+.||+|--...
T Consensus 164 ~~~-~~~Hs~~Va~la~~la~~lgl~~~~~~~~l~~aaLLHDIGk~~ip 211 (328)
T 3tm8_A 164 DKT-ISHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSP 211 (328)
T ss_dssp TCC-HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTGGGTTCS
T ss_pred Cch-HHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHhcCCcccCC
Confidence 344 789999888 2456777778 9999999999955443
No 36
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=72.08 E-value=3.1 Score=30.95 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHhcCCCC
Q psy17172 42 THLEIMASLLAAVAHDLDHP 61 (80)
Q Consensus 42 ~~~~~~a~l~aal~HDv~Hp 61 (80)
.+.|..+++.|||+||+|-.
T Consensus 99 ~~~Er~~l~~aALLHDIGKl 118 (393)
T 3kq5_A 99 TPLERYALFSAGLLLEVAHA 118 (393)
T ss_dssp CHHHHHHHHHHHHHTTTTHH
T ss_pred CchHHHHHHHHHHHhccchh
Confidence 34668899999999999854
No 37
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=65.39 E-value=2.6 Score=28.92 Aligned_cols=36 Identities=6% Similarity=-0.200 Sum_probs=24.8
Q ss_pred Chhhhhhhh-------hhchHHHHHHHHHHHHHhcCCCCCCch
Q psy17172 30 NSIHATDIK-------RHLTHLEIMASLLAAVAHDLDHPGVNQ 65 (80)
Q Consensus 30 N~~Ha~dv~-------~~l~~~~~~a~l~aal~HDv~HpG~~N 65 (80)
-|.|+..|+ ..+...+.-.+++||+.||+|-.....
T Consensus 125 ~~~hs~~va~~a~~la~~~~~~~~e~a~~aGLLHDIGkl~l~~ 167 (297)
T 1vqr_A 125 FLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLGIVIFSN 167 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHccHHHHHH
Confidence 356765555 334556666889999999999766543
No 38
>3nqw_A CG11900; stringent response, pyrophosphohydrolase, HD (histidine and acid) family ,PPGPP hydrolase, hydrolase; 2.90A {Drosophila melanogaster}
Probab=60.93 E-value=3.2 Score=27.15 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=23.8
Q ss_pred CCCCCChhhhhhhhhhch-HHHH--HHHHHHHHHhcC
Q psy17172 25 TNPYHNSIHATDIKRHLT-HLEI--MASLLAAVAHDL 58 (80)
Q Consensus 25 ~~pyHN~~Ha~dv~~~l~-~~~~--~a~l~aal~HDv 58 (80)
+.|| ..|+..|+..+. .... -..++||+.||+
T Consensus 30 G~py--i~Hpl~VA~ila~~l~~~D~~~i~AAlLHDv 64 (179)
T 3nqw_A 30 ETPY--VNHVINVSTILSVEACITDEGVLMAALLHDV 64 (179)
T ss_dssp CCBT--HHHHHHHHHHHHTTTCCCCHHHHHHHHTTTH
T ss_pred CCcH--HHHHHHHHHHHHHHcCCCCHHHHHHHHhhhH
Confidence 5788 789999997665 3321 357889999997
No 39
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=58.72 E-value=2.8 Score=28.58 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=21.4
Q ss_pred Chhhhhhhh-------hhc------hHHHHHHHHHHHHHhcCCCC
Q psy17172 30 NSIHATDIK-------RHL------THLEIMASLLAAVAHDLDHP 61 (80)
Q Consensus 30 N~~Ha~dv~-------~~l------~~~~~~a~l~aal~HDv~Hp 61 (80)
-|.|+..|+ ..+ +..+.-.+++||+.||+|--
T Consensus 118 ~~~hs~~vA~~a~~la~~~~~~~~~~~~~~~~~~laGLLHdiGkl 162 (281)
T 3i7a_A 118 VWRTSIDVTAAACSLLQIYNKKHPGSGLNYDTLTLAGLVHNIGAL 162 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHCCHH
Confidence 367887776 222 33344567899999999953
No 40
>3nr1_A HD domain-containing protein 3; stringent response, pyrophosphohydrolase, HD (histidine and acid) family, PPGPP hydrolase, hydrolase; 1.90A {Homo sapiens}
Probab=55.69 E-value=5.1 Score=26.15 Aligned_cols=32 Identities=34% Similarity=0.429 Sum_probs=23.0
Q ss_pred CCCCCChhhhhhhhhhch-HHH--HHHHHHHHHHhcC
Q psy17172 25 TNPYHNSIHATDIKRHLT-HLE--IMASLLAAVAHDL 58 (80)
Q Consensus 25 ~~pyHN~~Ha~dv~~~l~-~~~--~~a~l~aal~HDv 58 (80)
+.|| ..|+..|+..+. ... -...++||+.||+
T Consensus 28 G~PY--i~Hpl~VA~il~~~~~~~d~~~i~AALLHDv 62 (178)
T 3nr1_A 28 GTPY--INHPIGVARILTHEAGITDIVVLQAALLHDT 62 (178)
T ss_dssp CCBT--THHHHHHHHHHHHTSCCCCHHHHHHHHHTTH
T ss_pred CCcH--HHHHHHHHHHHHHHcCCCCHHHHHHHHhhhH
Confidence 5688 689999997663 221 1256888999987
No 41
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=42.43 E-value=4.3 Score=28.03 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=23.1
Q ss_pred hhhhhhhh-------hhchHHHHHHHHHHHHHhcCCCCCCch
Q psy17172 31 SIHATDIK-------RHLTHLEIMASLLAAVAHDLDHPGVNQ 65 (80)
Q Consensus 31 ~~Ha~dv~-------~~l~~~~~~a~l~aal~HDv~HpG~~N 65 (80)
|.|+..|+ ..+...+.-.+++||+.||+|--+...
T Consensus 120 ~~hs~~va~~a~~la~~~~~~~~~~~~~agllHDIGkl~l~~ 161 (305)
T 3hc1_A 120 WAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINF 161 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhHHHHHH
Confidence 68887776 122111334678999999999776654
No 42
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, mangan PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=42.22 E-value=15 Score=26.91 Aligned_cols=32 Identities=22% Similarity=0.508 Sum_probs=23.3
Q ss_pred CCCCCChhhhhhhhhhchHHHH-HHHHHHHHHhcC
Q psy17172 25 TNPYHNSIHATDIKRHLTHLEI-MASLLAAVAHDL 58 (80)
Q Consensus 25 ~~pyHN~~Ha~dv~~~l~~~~~-~a~l~aal~HDv 58 (80)
+.|| ..|+..|+..+.++.. ...++||+.||+
T Consensus 47 GePY--i~Hpl~VA~iLa~l~~D~~~i~AALLHDv 79 (393)
T 1vj7_A 47 GEPY--IVHPIQVAGILADLHLDAVTVACGFLHDV 79 (393)
T ss_dssp SCBT--THHHHHHHHHHHHTTCCHHHHHHHHHTTH
T ss_pred CCcH--HHHHHHHHHHHHHhcCCHHHHHHHHhhhH
Confidence 6788 7899999966653311 246789999996
No 43
>3iz6_U 40S ribosomal protein S24 (S24E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=37.81 E-value=7.2 Score=24.99 Aligned_cols=24 Identities=33% Similarity=0.459 Sum_probs=15.9
Q ss_pred cCCCCCCchHHHHhhcChhHHhcC
Q psy17172 57 DLDHPGVNQPFLIATSNHLAALYE 80 (80)
Q Consensus 57 Dv~HpG~~N~fl~~t~~~LA~lYn 80 (80)
||-|||..+.=-...+..||.+|+
T Consensus 31 dV~HpG~aTpsk~eIrekLAk~y~ 54 (138)
T 3iz6_U 31 EVLHPGRANVSKADLKEKLAKLYE 54 (138)
T ss_dssp CCCCCSSCCCCSHHHHHHHHHTCC
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhC
Confidence 788999655544455666776664
No 44
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=37.47 E-value=10 Score=26.54 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=19.8
Q ss_pred CCCCCChhhhhhhhhhc----hHHHHHHHHHHHHHhcCCC
Q psy17172 25 TNPYHNSIHATDIKRHL----THLEIMASLLAAVAHDLDH 60 (80)
Q Consensus 25 ~~pyHN~~Ha~dv~~~l----~~~~~~a~l~aal~HDv~H 60 (80)
+.+.=+..|+...++.. .+.+ -+.++|+.||+|+
T Consensus 55 D~~v~ql~HaLQTAe~ar~dg~d~d--w~~laaLlHDLGk 92 (250)
T 2ibn_A 55 DVDFPNSFHAFQTAEGIRKAHPDKD--WFHLVGLLHDLGK 92 (250)
T ss_dssp --CCCHHHHHHHHHHHHHHHSTTCH--HHHHHHHHTTGGG
T ss_pred CCcccHHHHHHHHHHHHHHhCcChh--HHHHHHHHhccHh
Confidence 44555566666665322 1113 3568999999987
No 45
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=34.64 E-value=43 Score=21.85 Aligned_cols=45 Identities=11% Similarity=0.052 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhCCCCCCCCChhhhhhhh----h---------hchHHHH--HHHHHHHHHhcCC
Q psy17172 10 RVWKLFSLIEEGYHGTNPYHNSIHATDIK----R---------HLTHLEI--MASLLAAVAHDLD 59 (80)
Q Consensus 10 ~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~----~---------~l~~~~~--~a~l~aal~HDv~ 59 (80)
...+=+..+...|. . +..||-.|. . .+++.+. -.+-.||+.||||
T Consensus 5 ir~~sv~~l~~ry~-v----d~~ha~~V~~~A~~Lf~~l~~~~~l~~~~~~~~lL~~Aa~LHdIG 64 (209)
T 3rf0_A 5 IRQRTAKSLADHYN-I----DREQARRVLETTEQLYTQWLAQNTKLVQPQLEALLKWAAMLHEVG 64 (209)
T ss_dssp HHHHHHHHHHHHHT-C----CHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHhC-C----CHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcc
Confidence 34444566677775 2 345776665 1 1223344 5788899999997
No 46
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=34.34 E-value=7.6 Score=26.61 Aligned_cols=32 Identities=3% Similarity=-0.031 Sum_probs=20.4
Q ss_pred hhhhhhhh-------hhchHHHHHHHHHHHHHhcCCCCC
Q psy17172 31 SIHATDIK-------RHLTHLEIMASLLAAVAHDLDHPG 62 (80)
Q Consensus 31 ~~Ha~dv~-------~~l~~~~~~a~l~aal~HDv~HpG 62 (80)
|.|+..|+ ..+...+.-.+++||+.||+|-..
T Consensus 110 ~~hs~~~A~~a~~la~~~~~~~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 110 WQKSLARAVALQSITAQASTVAPKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccHHH
Confidence 56777766 122211344578999999998643
No 47
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=29.79 E-value=29 Score=24.08 Aligned_cols=22 Identities=9% Similarity=0.057 Sum_probs=16.2
Q ss_pred HHHHHHHHHhcCC--CCCCchHHH
Q psy17172 47 MASLLAAVAHDLD--HPGVNQPFL 68 (80)
Q Consensus 47 ~a~l~aal~HDv~--HpG~~N~fl 68 (80)
-.+.+|+++||+| .|++.+.+.
T Consensus 57 ~ll~~a~llHDiGKa~~~FQ~k~l 80 (244)
T 3m5f_A 57 EFMKILIKLHDIGKASKIYQRAII 80 (244)
T ss_dssp HHHHHHHHHTTGGGGBHHHHHHHH
T ss_pred HHHHHHHHHcccccCCHHHHHHHH
Confidence 3566999999998 667766443
No 48
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=29.41 E-value=7.7 Score=24.77 Aligned_cols=24 Identities=25% Similarity=0.302 Sum_probs=16.0
Q ss_pred cCCCCCCchHHHHhhcChhHHhcC
Q psy17172 57 DLDHPGVNQPFLIATSNHLAALYE 80 (80)
Q Consensus 57 Dv~HpG~~N~fl~~t~~~LA~lYn 80 (80)
||-|||..+.=-...+..||.+|+
T Consensus 26 dV~HpG~aTpsr~eIrekLAk~y~ 49 (135)
T 3u5c_Y 26 DVLHPNRANVSKDELREKLAEVYK 49 (135)
T ss_dssp EEECSSSCCCCHHHHHHHHHTTTT
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHC
Confidence 678998655545555666776664
No 49
>2wp7_A PPPDE peptidase domain-containing protein 2; hydrolase, phosphoprotein, ubiquitin-like protein; 1.90A {Mus musculus} PDB: 3ebq_A
Probab=28.97 E-value=34 Score=22.31 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=25.9
Q ss_pred cccCHHHHHHHHHHHHhh-CCCCCCCC----Chhhhhhhh
Q psy17172 4 FNLDVVRVWKLFSLIEEG-YHGTNPYH----NSIHATDIK 38 (80)
Q Consensus 4 f~i~~~~l~~fl~~i~~~-Y~~~~pyH----N~~Ha~dv~ 38 (80)
-.++.+.+.+|+.+++.. |. ...|| |-.|-+|-.
T Consensus 77 T~~~~~~~~~~l~~l~~~~~~-g~~Y~Ll~~NCNhFs~~l 115 (168)
T 2wp7_A 77 TEVTEEIFLEYLSSLGESLFR-GEAYNLFEHNCNTFSNEV 115 (168)
T ss_dssp ECCCHHHHHHHHHHHHTTTCS-GGGCBTTTBSHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhhccCC-cccCchhhhccchhHHHH
Confidence 357899999999999998 87 66664 666655554
No 50
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=28.94 E-value=17 Score=23.36 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=22.2
Q ss_pred CCCCChhhhhhhh---hhch--------HHHHHHHHHHHHHhcCC
Q psy17172 26 NPYHNSIHATDIK---RHLT--------HLEIMASLLAAVAHDLD 59 (80)
Q Consensus 26 ~pyHN~~Ha~dv~---~~l~--------~~~~~a~l~aal~HDv~ 59 (80)
.|+=-+.|..-|+ ..+. +.+..-+..+|+.||+.
T Consensus 29 ~~esvaeHs~rVa~~A~~la~~~~~~~~~~d~~~v~~~aLlHD~~ 73 (177)
T 2cqz_A 29 EPESIADHSFGVAFITLVLADVLEKRGKRIDVEKALKMAIVHDLA 73 (177)
T ss_dssp SCCBHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhchH
Confidence 3565677887777 2222 23445677999999984
No 51
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=28.61 E-value=8.8 Score=23.44 Aligned_cols=24 Identities=25% Similarity=0.465 Sum_probs=15.4
Q ss_pred cCCCCCCchHHHHhhcChhHHhcC
Q psy17172 57 DLDHPGVNQPFLIATSNHLAALYE 80 (80)
Q Consensus 57 Dv~HpG~~N~fl~~t~~~LA~lYn 80 (80)
|+-|||..+.=-...+..||.+|+
T Consensus 30 ~v~Hpg~~tpsk~eirekLA~~~~ 53 (107)
T 2v94_A 30 EIYHPGEPTPSRKDVKGKLVAMLD 53 (107)
T ss_dssp EEECTTSCCCCHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHC
Confidence 667887666555555666666664
No 52
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=27.31 E-value=6.6 Score=23.62 Aligned_cols=23 Identities=13% Similarity=-0.010 Sum_probs=14.2
Q ss_pred cCCCCCCchHHHHhhcChhHHhc
Q psy17172 57 DLDHPGVNQPFLIATSNHLAALY 79 (80)
Q Consensus 57 Dv~HpG~~N~fl~~t~~~LA~lY 79 (80)
|+-|||..+.=-...+..||.+|
T Consensus 22 ~v~hp~~~tpsk~eirekLA~~~ 44 (98)
T 2g1d_A 22 VLKFDSSRTPSREEIKELIAKHE 44 (98)
T ss_dssp EEECCTTSCCCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHH
Confidence 56688766655555555666655
No 53
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=22.22 E-value=17 Score=24.57 Aligned_cols=32 Identities=6% Similarity=-0.007 Sum_probs=19.9
Q ss_pred Chhhhhhhh-------hhchHHHHHHHHHHHHHhcCCCCC
Q psy17172 30 NSIHATDIK-------RHLTHLEIMASLLAAVAHDLDHPG 62 (80)
Q Consensus 30 N~~Ha~dv~-------~~l~~~~~~a~l~aal~HDv~HpG 62 (80)
-|.|+..|+ +.+ ..+.-.+++||+.||+|-..
T Consensus 106 ~~~hs~~~a~~a~~la~~~-~~~~~~~~~agLLhdiGkl~ 144 (275)
T 3m1t_A 106 FWGNTFEVAIICQELAKRL-GTLPEEAFTCGILHSIGELL 144 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TSCHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHccHHH
Confidence 366777666 111 11233579999999998543
No 54
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=22.19 E-value=31 Score=22.66 Aligned_cols=16 Identities=25% Similarity=0.229 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHhcCC
Q psy17172 44 LEIMASLLAAVAHDLD 59 (80)
Q Consensus 44 ~~~~a~l~aal~HDv~ 59 (80)
++.--+..+||.||++
T Consensus 58 vD~~~~~~~aLlHDi~ 73 (201)
T 2paq_A 58 VNAERIALLAMYHDAS 73 (201)
T ss_dssp CCHHHHHHHHHHTTTT
T ss_pred cCHHHHHHHHHhcccc
Confidence 4566778889999984
No 55
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=22.06 E-value=14 Score=23.97 Aligned_cols=24 Identities=21% Similarity=0.178 Sum_probs=16.1
Q ss_pred cCCCCCCchHHHHhhcChhHHhcC
Q psy17172 57 DLDHPGVNQPFLIATSNHLAALYE 80 (80)
Q Consensus 57 Dv~HpG~~N~fl~~t~~~LA~lYn 80 (80)
||-|||..+.=-...+..||.+|+
T Consensus 24 dV~Hpg~aTpSk~eIrekLAkmy~ 47 (149)
T 2xzm_P 24 DVLHPDSPTASKEKIREELAKQLK 47 (149)
T ss_dssp EEECSSSCSCCHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHC
Confidence 667888766655566666776664
No 56
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=20.88 E-value=64 Score=17.08 Aligned_cols=19 Identities=0% Similarity=0.069 Sum_probs=16.3
Q ss_pred cccccCHHHHHHHHHHHHh
Q psy17172 2 EHFNLDVVRVWKLFSLIEE 20 (80)
Q Consensus 2 ~~f~i~~~~l~~fl~~i~~ 20 (80)
+.++++..++++.+..+++
T Consensus 33 ~~lglsr~tv~~~l~~L~~ 51 (67)
T 2heo_A 33 KKCQVPKKTLNQVLYRLKK 51 (67)
T ss_dssp HHHCSCHHHHHHHHHHHHH
T ss_pred HHHCcCHHHHHHHHHHHHH
Confidence 3588999999999998876
Done!