BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17177
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HD45|TM9S3_HUMAN Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1
SV=2
Length = 589
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 65/100 (65%), Gaps = 28/100 (28%)
Query: 34 IHWFSIFNSFMMVIFL----------------------------ERDLGDEYGWKQVHGD 65
IHWFSIFNSFMMVIFL +RDLGDEYGWKQVHGD
Sbjct: 221 IHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGD 280
Query: 66 VFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDLYTE 105
VFRPS HP++FS+LIG+G QI V+L VI+ A++ DLYTE
Sbjct: 281 VFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTE 320
>sp|Q9ET30|TM9S3_MOUSE Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1
SV=1
Length = 587
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 65/100 (65%), Gaps = 28/100 (28%)
Query: 34 IHWFSIFNSFMMVIFL----------------------------ERDLGDEYGWKQVHGD 65
IHWFSIFNSFMMVIFL +RDLGDEYGWKQVHGD
Sbjct: 219 IHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGD 278
Query: 66 VFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDLYTE 105
VFRPS HP++FS+LIG+G QI V+L VI+ A++ DLYTE
Sbjct: 279 VFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTE 318
>sp|Q8BH24|TM9S4_MOUSE Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2
SV=1
Length = 643
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V FL G++SMI++RTLRKD A Y+K+++++D + +E GWK
Sbjct: 290 VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTM--------------------EESGWK 329
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGDVFRP +PM+ S+L+G+G Q+ + L VI A++G L
Sbjct: 330 LVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGML 371
>sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1
SV=2
Length = 642
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V FL G++SMI++RTLRKD A Y+K+++++D + +E GWK
Sbjct: 289 VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTM--------------------EESGWK 328
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGDVFRP +PM+ S+L+G+G Q+ + L VI A++G L
Sbjct: 329 LVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGML 370
>sp|Q4KLL4|TM9S4_RAT Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4
PE=2 SV=1
Length = 643
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V FL G++SMI++RTLRKD A Y+K+++++D + +E GWK
Sbjct: 290 VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTM--------------------EESGWK 329
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGDVFRP +PM+ S+L+G+G Q+ + L VI A++G L
Sbjct: 330 LVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGML 371
>sp|Q5RDY2|TM9S4_PONAB Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2
SV=1
Length = 642
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V FL G++SMI++RTLRKD A Y+K+++++D + +E GWK
Sbjct: 289 VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTM--------------------EESGWK 328
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGDVFRP +PM+ S+L+G+G Q+ + L VI A++G L
Sbjct: 329 LVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGML 370
>sp|A5D7E2|TM9S4_BOVIN Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2
SV=2
Length = 642
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V FL G++SMI++RTLRKD A Y+K+++++D + +E GWK
Sbjct: 289 VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTM--------------------EESGWK 328
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGDVFRP +PM+ S+L+G+G Q+ + L VI A++G L
Sbjct: 329 LVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGML 370
>sp|Q55FP0|PHG1A_DICDI Putative phagocytic receptor 1a OS=Dictyostelium discoideum
GN=phg1a PE=2 SV=1
Length = 641
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 19/103 (18%)
Query: 1 MVIFLVG-LVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGW 59
M++F++ +V+MI++RTL+KD RY+ + +D RD +E GW
Sbjct: 286 MIVFILTVMVAMIIIRTLKKDIRRYTSIDTSED------------------RDSQEETGW 327
Query: 60 KQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
K +HGDVFRP HPML S IG+G QI ++TL ++FA++G L
Sbjct: 328 KMIHGDVFRPPSHPMLLSVCIGSGVQIFSMTLITMIFAVLGFL 370
>sp|P58021|TM9S2_MOUSE Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2
SV=1
Length = 662
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V+FL G+V+MI++RTL KD ARY++ + +D +E+GWK
Sbjct: 309 IVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDA--------------------QEEFGWK 348
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGD+FRP ML S +G+G QI +T + FA +G L
Sbjct: 349 LVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFL 390
>sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2
PE=2 SV=1
Length = 663
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V+FL G+V+MI++RTL KD ARY++ + +D +E+GWK
Sbjct: 310 IVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDA--------------------QEEFGWK 349
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGD+FRP ML S +G+G QI +T + FA +G L
Sbjct: 350 LVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFL 391
>sp|Q5R8Y6|TM9S2_PONAB Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2
SV=1
Length = 663
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V+FL G+V+MI++RTL KD ARY++ + +D +E+GWK
Sbjct: 310 IVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDA--------------------QEEFGWK 349
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGD+FRP ML S +G+G QI +T + FA +G L
Sbjct: 350 LVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFL 391
>sp|Q99805|TM9S2_HUMAN Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1
SV=1
Length = 663
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 20/102 (19%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V+FL G+V+MI++RTL KD ARY++ + +D +E+GWK
Sbjct: 310 IVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDA--------------------QEEFGWK 349
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDL 102
VHGD+FRP ML S +G+G QI +T + FA +G L
Sbjct: 350 LVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFL 391
>sp|Q9Y819|YON8_SCHPO Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1105.08 PE=3 SV=1
Length = 629
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 19/97 (19%)
Query: 4 FLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWKQVH 63
FL+ +VS+IL RTL +D +Y+ VD + D+ +++GWK VH
Sbjct: 278 FLIFVVSIILYRTLNRDINKYN-SAFVD------------------QEDVQEDFGWKLVH 318
Query: 64 GDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
GDVFRP PMLFS L+GTG Q+ ++ ++LFAI G
Sbjct: 319 GDVFRPPRRPMLFSILLGTGAQLLFMSSGIVLFAIFG 355
>sp|Q54ZW0|PHG1B_DICDI Putative phagocytic receptor 1b OS=Dictyostelium discoideum
GN=phg1b PE=2 SV=1
Length = 587
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+V+ L +++++M+ L+ DY+RYSK +E +D D ++YGWK
Sbjct: 231 LVVLLTAFLAIMIMKILKNDYSRYSKTDEEED------------------SDYQEDYGWK 272
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVGDLY 103
VHGDVFR P+ +FSA G G+Q ++ ++ ++ G Y
Sbjct: 273 LVHGDVFRFPPYKNVFSAFYGIGWQFISIVCGILALSLFGMFY 315
>sp|O15321|TM9S1_HUMAN Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2
SV=2
Length = 606
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 25/106 (23%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEV------DDMIHWFSIFNSFMMVIFLERDLG 54
+V LVG V++ILMR LR D ARY+ DEE DD D G
Sbjct: 245 LVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDF------------------DQG 286
Query: 55 DEYGWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
D GWK +H DVFR P+ L A++G G Q + +I+ A++G
Sbjct: 287 DN-GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331
>sp|Q9DBU0|TM9S1_MOUSE Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2
SV=2
Length = 606
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 25/106 (23%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEV------DDMIHWFSIFNSFMMVIFLERDLG 54
+V LVG V++ILMR LR D ARY+ DEE DD D G
Sbjct: 245 LVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDF------------------DQG 286
Query: 55 DEYGWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
D GWK +H DVFR P+ L A++G G Q + +I+ A++G
Sbjct: 287 DN-GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331
>sp|Q5R8F1|TM9S1_PONAB Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2
SV=1
Length = 606
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 25/106 (23%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEV------DDMIHWFSIFNSFMMVIFLERDLG 54
+V LVG V++ILMR LR D ARY+ DEE DD D G
Sbjct: 245 LVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDF------------------DQG 286
Query: 55 DEYGWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
D GWK +H DVFR P+ L A++G G Q + +I+ A++G
Sbjct: 287 DN-GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331
>sp|Q66HF2|TM9S1_RAT Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1
PE=2 SV=1
Length = 589
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEV------DDMIHWFSIFNSFMMVIFLERDLG 54
+V LVG V++ILMR LR D ARY+ DEE DD D G
Sbjct: 245 LVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDF------------------DQG 286
Query: 55 DEYGWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
D GWK +H DVFR P L A++G G Q + +I+ A++G
Sbjct: 287 DN-GWKIIHTDVFRFPPCRGLLCAVLGVGAQFLALGTGIIVMALLG 331
>sp|A4IFE9|TM9S1_BOVIN Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2
SV=1
Length = 606
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEY--- 57
+V LVG V++ILMR LR D ARY+ DEE GD++
Sbjct: 245 LVFLLVGFVAVILMRVLRNDLARYNLDEETASA------------------GSGDDFDQS 286
Query: 58 --GWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
GWK +H DVFR P+ L A++G G Q + +I+ A++G
Sbjct: 287 DNGWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331
>sp|Q04562|TMN2_YEAST Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TMN2 PE=1 SV=1
Length = 672
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 1 MVIFLVGLVSMILMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWK 60
+VI L +V L+R L+ D ARY++ + L+ + ++ GWK
Sbjct: 319 IVILLSSVVMHSLLRALKSDLARYNE--------------------LNLDNEFHEDSGWK 358
Query: 61 QVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
HGDVFR ML S L+G+G Q+ + + I FA VG
Sbjct: 359 LGHGDVFRTPSKSMLLSILVGSGMQLFLMVMCSIFFAAVG 398
>sp|P32802|TMN1_YEAST Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=EMP70 PE=1 SV=2
Length = 667
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 20/90 (22%)
Query: 13 LMRTLRKDYARYSKDEEVDDMIHWFSIFNSFMMVIFLERDLGDEYGWKQVHGDVFRPSPH 72
L+R L+ D+ARY++ + L+ D ++ GWK HGDVFR
Sbjct: 326 LLRALKSDFARYNE--------------------LNLDDDFQEDSGWKLNHGDVFRSPSQ 365
Query: 73 PMLFSALIGTGYQITTVTLSVILFAIVGDL 102
+ S L+G+G Q+ + I FA +G L
Sbjct: 366 SLTLSILVGSGVQLFLMVTCSIFFAALGFL 395
>sp|Q7YTA6|PHG1C_DICDI Putative phagocytic receptor 1c OS=Dictyostelium discoideum
GN=phg1c PE=2 SV=1
Length = 655
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 55 DEYGWKQVHGDVFRPSPHPMLFSALIGTGYQITTVTLSVILFAIVG 100
D+ GWK ++ DVFR + M FS +IG G QI +++F++ G
Sbjct: 338 DDGGWKSIYADVFRSPNNFMTFSIIIGFGVQIVASLFILMVFSVAG 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,945,838
Number of Sequences: 539616
Number of extensions: 1404141
Number of successful extensions: 3646
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3588
Number of HSP's gapped (non-prelim): 42
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)