Query psy17178
Match_columns 384
No_of_seqs 390 out of 3456
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:52:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 3.1E-32 1.1E-36 240.5 15.4 156 45-208 17-172 (216)
2 4g2e_A Peroxiredoxin; redox pr 100.0 1.2E-31 4.1E-36 227.9 9.1 135 50-194 3-137 (157)
3 3tue_A Tryparedoxin peroxidase 100.0 2.9E-30 9.9E-35 228.3 16.0 150 50-207 25-175 (219)
4 3sbc_A Peroxiredoxin TSA1; alp 100.0 4.3E-29 1.5E-33 220.3 17.9 141 240-380 22-162 (216)
5 4g2e_A Peroxiredoxin; redox pr 100.0 8.6E-30 2.9E-34 216.4 11.1 130 240-379 3-137 (157)
6 4gqc_A Thiol peroxidase, perox 100.0 4.9E-31 1.7E-35 225.7 3.2 135 49-194 3-139 (164)
7 3tjj_A Peroxiredoxin-4; thiore 100.0 2.7E-28 9.4E-33 222.8 15.9 142 48-194 59-200 (254)
8 4gqc_A Thiol peroxidase, perox 100.0 2E-29 6.7E-34 215.8 6.3 131 240-380 4-140 (164)
9 3tue_A Tryparedoxin peroxidase 100.0 9.8E-28 3.3E-32 212.1 17.0 139 241-379 26-165 (219)
10 3qpm_A Peroxiredoxin; oxidored 100.0 4.2E-28 1.4E-32 220.1 15.1 141 49-194 46-186 (240)
11 3tjj_A Peroxiredoxin-4; thiore 100.0 1.9E-27 6.4E-32 217.3 18.5 140 240-379 61-200 (254)
12 2pn8_A Peroxiredoxin-4; thiore 100.0 8E-28 2.7E-32 214.2 15.4 142 49-195 17-158 (211)
13 3qpm_A Peroxiredoxin; oxidored 100.0 2.4E-27 8.4E-32 215.1 18.0 140 240-379 47-186 (240)
14 2pn8_A Peroxiredoxin-4; thiore 99.9 3.2E-27 1.1E-31 210.3 17.4 140 240-379 18-157 (211)
15 3mng_A Peroxiredoxin-5, mitoch 99.9 3.1E-28 1.1E-32 209.8 10.0 142 49-204 13-162 (173)
16 1tp9_A Peroxiredoxin, PRX D (t 99.9 9.3E-28 3.2E-32 204.9 11.0 137 50-195 3-146 (162)
17 3uma_A Hypothetical peroxiredo 99.9 1.2E-27 4E-32 208.3 10.2 139 48-195 23-167 (184)
18 3ixr_A Bacterioferritin comigr 99.9 8.9E-28 3E-32 208.4 9.0 136 47-192 17-157 (179)
19 1zye_A Thioredoxin-dependent p 99.9 1.8E-26 6.1E-31 206.8 16.4 142 49-195 25-166 (220)
20 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 2.8E-27 9.6E-32 202.9 10.6 131 50-192 2-139 (167)
21 3ztl_A Thioredoxin peroxidase; 99.9 7.8E-27 2.7E-31 209.5 13.9 144 48-196 37-180 (222)
22 3ztl_A Thioredoxin peroxidase; 99.9 2.2E-26 7.5E-31 206.6 16.8 141 240-380 39-179 (222)
23 2c0d_A Thioredoxin peroxidase 99.9 2.4E-26 8.3E-31 205.9 16.0 139 50-195 24-165 (221)
24 2c0d_A Thioredoxin peroxidase 99.9 4.1E-26 1.4E-30 204.4 17.1 137 241-379 25-164 (221)
25 1tp9_A Peroxiredoxin, PRX D (t 99.9 3.2E-26 1.1E-30 195.3 15.6 131 241-380 4-146 (162)
26 3mng_A Peroxiredoxin-5, mitoch 99.9 2E-26 6.8E-31 198.5 13.9 134 238-381 12-157 (173)
27 3ixr_A Bacterioferritin comigr 99.9 1.5E-26 5E-31 200.8 13.0 131 238-378 18-158 (179)
28 1n8j_A AHPC, alkyl hydroperoxi 99.9 1.4E-26 4.8E-31 202.1 13.0 133 52-195 2-137 (186)
29 1zye_A Thioredoxin-dependent p 99.9 9.5E-26 3.3E-30 202.1 18.6 140 240-379 26-165 (220)
30 1q98_A Thiol peroxidase, TPX; 99.9 1.4E-26 4.8E-31 198.1 12.5 132 49-194 15-148 (165)
31 3p7x_A Probable thiol peroxida 99.9 2E-26 6.8E-31 197.3 13.3 129 238-379 17-147 (166)
32 1qmv_A Human thioredoxin perox 99.9 3.8E-26 1.3E-30 201.1 15.5 142 50-196 4-145 (197)
33 1uul_A Tryparedoxin peroxidase 99.9 3.4E-26 1.2E-30 202.2 15.1 143 49-196 4-147 (202)
34 1q98_A Thiol peroxidase, TPX; 99.9 4.8E-26 1.6E-30 194.8 15.2 128 239-378 15-147 (165)
35 3gkn_A Bacterioferritin comigr 99.9 4.7E-27 1.6E-31 200.2 8.8 133 50-192 6-141 (163)
36 1psq_A Probable thiol peroxida 99.9 2.7E-26 9.2E-31 195.9 13.3 129 239-379 14-144 (163)
37 3gkn_A Bacterioferritin comigr 99.9 3.4E-26 1.1E-30 194.9 13.4 129 241-379 7-143 (163)
38 2v2g_A Peroxiredoxin 6; oxidor 99.9 5.9E-27 2E-31 211.1 9.0 148 50-204 2-152 (233)
39 3drn_A Peroxiredoxin, bacterio 99.9 1.5E-26 5.2E-31 196.9 10.9 129 50-195 1-130 (161)
40 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 4.5E-26 1.6E-30 195.3 13.9 130 241-381 3-143 (167)
41 1psq_A Probable thiol peroxida 99.9 9.1E-27 3.1E-31 198.8 9.4 130 49-195 14-145 (163)
42 1n8j_A AHPC, alkyl hydroperoxi 99.9 7.1E-26 2.4E-30 197.6 15.1 134 242-380 2-137 (186)
43 3zrd_A Thiol peroxidase; oxido 99.9 7.1E-26 2.4E-30 199.9 14.7 129 239-379 50-183 (200)
44 3p7x_A Probable thiol peroxida 99.9 1.2E-26 4.2E-31 198.6 9.3 129 48-194 17-147 (166)
45 3zrd_A Thiol peroxidase; oxido 99.9 3E-26 1E-30 202.3 12.0 132 49-194 50-183 (200)
46 3drn_A Peroxiredoxin, bacterio 99.9 6.7E-26 2.3E-30 193.0 13.6 127 241-379 2-129 (161)
47 4f82_A Thioredoxin reductase; 99.9 2.7E-26 9.1E-31 196.5 11.1 138 49-194 8-157 (176)
48 2i81_A 2-Cys peroxiredoxin; st 99.9 1.1E-25 3.8E-30 200.6 15.2 140 49-195 19-161 (213)
49 1qmv_A Human thioredoxin perox 99.9 3.3E-25 1.1E-29 195.1 17.7 139 241-379 5-143 (197)
50 2i81_A 2-Cys peroxiredoxin; st 99.9 2.3E-25 7.7E-30 198.6 16.8 138 240-379 20-160 (213)
51 1uul_A Tryparedoxin peroxidase 99.9 3.3E-25 1.1E-29 195.9 17.4 139 241-379 6-145 (202)
52 3uma_A Hypothetical peroxiredo 99.9 1.2E-25 4.1E-30 195.6 14.1 133 239-380 24-167 (184)
53 1prx_A HORF6; peroxiredoxin, h 99.9 3.8E-26 1.3E-30 205.0 10.3 148 50-204 4-156 (224)
54 2xhf_A Peroxiredoxin 5; oxidor 99.9 4.2E-26 1.4E-30 195.0 9.4 134 49-192 12-149 (171)
55 2h01_A 2-Cys peroxiredoxin; th 99.9 5.5E-25 1.9E-29 192.8 16.6 135 243-379 2-139 (192)
56 3keb_A Probable thiol peroxida 99.9 8.8E-26 3E-30 200.7 11.2 126 49-191 20-152 (224)
57 1xcc_A 1-Cys peroxiredoxin; un 99.9 6.1E-26 2.1E-30 203.2 9.0 150 50-204 2-153 (220)
58 2yzh_A Probable thiol peroxida 99.9 2.6E-25 8.9E-30 191.2 12.4 128 239-379 19-151 (171)
59 2h01_A 2-Cys peroxiredoxin; th 99.9 4.6E-25 1.6E-29 193.3 14.1 137 52-195 1-140 (192)
60 2yzh_A Probable thiol peroxida 99.9 1.1E-25 3.7E-30 193.6 9.7 131 49-194 19-151 (171)
61 1we0_A Alkyl hydroperoxide red 99.9 7.4E-25 2.5E-29 191.2 14.2 135 51-196 1-139 (187)
62 3a2v_A Probable peroxiredoxin; 99.9 2.2E-25 7.5E-30 202.3 10.5 143 50-204 4-149 (249)
63 1nm3_A Protein HI0572; hybrid, 99.9 3E-25 1E-29 201.6 11.3 137 50-196 2-144 (241)
64 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.8E-25 6.1E-30 189.8 8.6 131 49-196 5-137 (159)
65 1we0_A Alkyl hydroperoxide red 99.9 2.5E-24 8.7E-29 187.7 16.1 133 242-380 2-138 (187)
66 1zof_A Alkyl hydroperoxide-red 99.9 2E-24 6.8E-29 190.2 15.1 139 51-196 1-143 (198)
67 2a4v_A Peroxiredoxin DOT5; yea 99.9 5.3E-25 1.8E-29 186.9 11.0 128 240-379 6-135 (159)
68 1zof_A Alkyl hydroperoxide-red 99.9 3E-24 1E-28 189.0 15.9 136 242-379 2-141 (198)
69 3keb_A Probable thiol peroxida 99.9 1.4E-24 4.8E-29 192.9 13.8 128 238-380 19-156 (224)
70 2pwj_A Mitochondrial peroxired 99.9 5.4E-25 1.9E-29 189.4 10.3 139 50-196 6-155 (171)
71 2v2g_A Peroxiredoxin 6; oxidor 99.9 4.8E-25 1.6E-29 198.7 10.3 135 241-379 3-145 (233)
72 2bmx_A Alkyl hydroperoxidase C 99.9 2.6E-24 8.7E-29 189.1 14.5 135 50-196 3-152 (195)
73 1xvw_A Hypothetical protein RV 99.9 2.1E-24 7.1E-29 183.1 13.4 130 241-380 9-141 (160)
74 1xvw_A Hypothetical protein RV 99.9 6.2E-25 2.1E-29 186.4 9.8 131 51-196 9-142 (160)
75 1prx_A HORF6; peroxiredoxin, h 99.9 2.4E-24 8.3E-29 193.3 13.1 135 241-379 5-149 (224)
76 1xiy_A Peroxiredoxin, pfaop; a 99.9 8.7E-25 3E-29 189.1 9.6 132 51-192 1-151 (182)
77 2jsy_A Probable thiol peroxida 99.9 2.2E-24 7.4E-29 184.5 11.1 130 49-195 16-147 (167)
78 2bmx_A Alkyl hydroperoxidase C 99.9 1E-23 3.5E-28 185.2 15.7 134 241-379 4-150 (195)
79 2jsy_A Probable thiol peroxida 99.9 4.6E-24 1.6E-28 182.4 12.8 128 239-379 16-146 (167)
80 4f82_A Thioredoxin reductase; 99.9 1.4E-23 4.9E-28 179.5 15.3 133 240-380 9-158 (176)
81 1xvq_A Thiol peroxidase; thior 99.9 1.1E-23 3.7E-28 181.9 14.4 126 240-378 17-146 (175)
82 1nm3_A Protein HI0572; hybrid, 99.9 8.5E-24 2.9E-28 192.0 14.4 130 241-380 3-143 (241)
83 1xcc_A 1-Cys peroxiredoxin; un 99.9 4E-24 1.4E-28 191.4 11.9 135 241-379 3-146 (220)
84 1xvq_A Thiol peroxidase; thior 99.9 6E-24 2.1E-28 183.5 12.3 131 49-194 16-147 (175)
85 4eo3_A Bacterioferritin comigr 99.9 1.9E-24 6.4E-29 204.0 9.6 118 55-193 2-119 (322)
86 3ewl_A Uncharacterized conserv 99.9 1.2E-23 4.2E-28 174.5 13.4 117 242-375 2-124 (142)
87 3a2v_A Probable peroxiredoxin; 99.9 8E-24 2.7E-28 192.0 12.3 136 240-380 4-143 (249)
88 4fo5_A Thioredoxin-like protei 99.9 3.7E-24 1.3E-28 178.2 9.3 121 240-378 6-131 (143)
89 3eur_A Uncharacterized protein 99.9 1.8E-23 6.2E-28 173.8 12.8 121 241-378 5-131 (142)
90 3fw2_A Thiol-disulfide oxidore 99.9 2.3E-23 7.9E-28 174.8 13.5 121 241-378 5-134 (150)
91 2pwj_A Mitochondrial peroxired 99.9 2.3E-23 7.9E-28 179.2 13.7 131 242-380 8-154 (171)
92 4eo3_A Bacterioferritin comigr 99.9 1.5E-23 5E-28 197.9 12.9 121 245-381 2-122 (322)
93 3u5r_E Uncharacterized protein 99.9 1.6E-23 5.4E-28 187.4 12.3 122 239-377 30-160 (218)
94 3eyt_A Uncharacterized protein 99.9 1.9E-23 6.5E-28 176.6 11.7 122 243-379 2-136 (158)
95 2lrt_A Uncharacterized protein 99.9 6.2E-23 2.1E-27 172.9 14.1 124 240-383 8-135 (152)
96 1xzo_A BSSCO, hypothetical pro 99.9 9.6E-23 3.3E-27 175.0 15.4 131 238-379 4-154 (174)
97 3eur_A Uncharacterized protein 99.9 1.7E-23 6E-28 173.9 10.4 121 50-192 4-130 (142)
98 2xhf_A Peroxiredoxin 5; oxidor 99.9 9.2E-23 3.1E-27 174.3 14.9 132 239-381 12-153 (171)
99 3ewl_A Uncharacterized conserv 99.9 1.9E-23 6.3E-28 173.4 10.4 117 52-190 2-124 (142)
100 2lrn_A Thiol:disulfide interch 99.9 7.7E-23 2.6E-27 172.0 14.2 121 241-378 3-127 (152)
101 3u5r_E Uncharacterized protein 99.9 9.4E-24 3.2E-28 188.8 8.9 120 48-189 29-157 (218)
102 4fo5_A Thioredoxin-like protei 99.9 5.6E-24 1.9E-28 177.1 6.2 121 49-192 5-130 (143)
103 3fw2_A Thiol-disulfide oxidore 99.9 3.5E-23 1.2E-27 173.6 10.6 121 50-192 4-133 (150)
104 3kcm_A Thioredoxin family prot 99.9 1.6E-22 5.5E-27 170.0 14.5 122 241-379 2-125 (154)
105 1xzo_A BSSCO, hypothetical pro 99.9 5.6E-23 1.9E-27 176.5 11.7 137 49-196 5-156 (174)
106 3lor_A Thiol-disulfide isomera 99.9 4E-23 1.4E-27 174.8 10.4 121 243-379 5-139 (160)
107 2lrt_A Uncharacterized protein 99.9 4.7E-23 1.6E-27 173.6 10.7 122 51-196 9-134 (152)
108 2lrn_A Thiol:disulfide interch 99.9 6E-23 2.1E-27 172.6 10.6 121 50-192 2-126 (152)
109 3hcz_A Possible thiol-disulfid 99.9 1.3E-22 4.4E-27 169.1 12.0 121 241-378 5-129 (148)
110 3gl3_A Putative thiol:disulfid 99.9 4.9E-22 1.7E-26 166.6 15.6 121 241-379 3-124 (152)
111 3hdc_A Thioredoxin family prot 99.9 1.5E-22 5.1E-27 171.4 11.8 122 239-379 13-134 (158)
112 2cvb_A Probable thiol-disulfid 99.9 2.9E-22 9.9E-27 174.6 13.3 119 240-376 6-132 (188)
113 3lwa_A Secreted thiol-disulfid 99.9 3.7E-22 1.3E-26 173.2 13.7 125 241-379 31-165 (183)
114 2obi_A PHGPX, GPX-4, phospholi 99.9 5.3E-23 1.8E-27 178.7 8.3 138 47-196 17-170 (183)
115 1jfu_A Thiol:disulfide interch 99.9 2.8E-22 9.5E-27 174.3 12.9 126 241-379 34-162 (186)
116 2f9s_A Thiol-disulfide oxidore 99.9 4.3E-22 1.5E-26 167.0 13.4 120 243-379 2-122 (151)
117 2gs3_A PHGPX, GPX-4, phospholi 99.9 8.3E-23 2.8E-27 177.9 9.0 137 49-197 21-173 (185)
118 3lor_A Thiol-disulfide isomera 99.9 4.7E-23 1.6E-27 174.4 6.9 123 52-196 4-141 (160)
119 3eyt_A Uncharacterized protein 99.9 4.9E-23 1.7E-27 174.0 6.8 124 53-196 2-138 (158)
120 3kcm_A Thioredoxin family prot 99.9 2E-22 7E-27 169.3 10.5 124 51-196 2-127 (154)
121 1xiy_A Peroxiredoxin, pfaop; a 99.9 3.9E-22 1.3E-26 172.4 12.5 130 242-380 2-154 (182)
122 4hde_A SCO1/SENC family lipopr 99.9 2.8E-21 9.5E-26 166.0 17.4 130 242-379 7-152 (170)
123 2v1m_A Glutathione peroxidase; 99.9 1.1E-22 3.6E-27 173.8 8.4 136 50-196 4-153 (169)
124 2obi_A PHGPX, GPX-4, phospholi 99.9 4.1E-22 1.4E-26 173.1 12.2 130 238-379 18-168 (183)
125 3fkf_A Thiol-disulfide oxidore 99.9 5.1E-22 1.8E-26 165.4 12.3 121 241-378 5-132 (148)
126 2v1m_A Glutathione peroxidase; 99.9 3.6E-22 1.2E-26 170.5 11.4 127 241-379 5-151 (169)
127 3gl3_A Putative thiol:disulfid 99.9 4.4E-22 1.5E-26 166.9 11.7 124 50-196 2-126 (152)
128 3hdc_A Thioredoxin family prot 99.9 2.1E-22 7.1E-27 170.5 9.5 125 48-196 12-136 (158)
129 2gs3_A PHGPX, GPX-4, phospholi 99.9 4E-22 1.4E-26 173.5 11.6 127 241-379 23-170 (185)
130 3hcz_A Possible thiol-disulfid 99.9 1.1E-22 3.8E-27 169.4 7.6 123 50-194 4-130 (148)
131 2l5o_A Putative thioredoxin; s 99.9 9.5E-22 3.2E-26 165.1 13.2 122 241-379 2-125 (153)
132 3me7_A Putative uncharacterize 99.9 2.4E-22 8.3E-27 172.6 9.6 134 52-195 2-146 (170)
133 2ywi_A Hypothetical conserved 99.9 6.3E-22 2.2E-26 173.4 12.5 122 240-378 17-148 (196)
134 2ggt_A SCO1 protein homolog, m 99.9 1.4E-21 4.9E-26 165.9 14.3 123 246-379 2-145 (164)
135 2p31_A CL683, glutathione pero 99.9 2E-22 6.8E-27 174.8 9.1 123 240-379 22-165 (181)
136 2f9s_A Thiol-disulfide oxidore 99.9 2.6E-22 9E-27 168.3 9.2 123 52-196 1-124 (151)
137 2p31_A CL683, glutathione pero 99.9 7.6E-23 2.6E-27 177.5 5.9 134 49-196 21-167 (181)
138 3erw_A Sporulation thiol-disul 99.9 1.2E-21 4E-26 162.5 12.6 122 240-379 8-133 (145)
139 3dwv_A Glutathione peroxidase- 99.9 7.7E-23 2.7E-27 178.4 5.6 138 49-196 18-169 (187)
140 2cvb_A Probable thiol-disulfid 99.9 4E-22 1.4E-26 173.7 10.0 123 49-196 5-135 (188)
141 4hde_A SCO1/SENC family lipopr 99.9 1.6E-21 5.4E-26 167.5 13.5 135 52-195 7-153 (170)
142 2f8a_A Glutathione peroxidase 99.9 1.5E-21 5E-26 173.2 13.4 126 243-379 22-191 (208)
143 3dwv_A Glutathione peroxidase- 99.9 2.7E-22 9.2E-27 175.0 8.4 125 241-379 20-167 (187)
144 3me7_A Putative uncharacterize 99.9 1.1E-21 3.9E-26 168.4 12.1 133 242-382 2-148 (170)
145 2ywi_A Hypothetical conserved 99.9 4.1E-22 1.4E-26 174.6 9.5 121 49-191 16-146 (196)
146 3lwa_A Secreted thiol-disulfid 99.9 9.6E-22 3.3E-26 170.5 11.7 131 49-196 29-167 (183)
147 1jfu_A Thiol:disulfide interch 99.9 4.4E-22 1.5E-26 173.1 9.5 131 48-196 31-164 (186)
148 2p5q_A Glutathione peroxidase 99.9 8.6E-23 2.9E-27 174.6 4.8 130 50-196 5-154 (170)
149 3kh7_A Thiol:disulfide interch 99.9 2.4E-21 8.2E-26 167.2 13.9 118 241-379 30-151 (176)
150 3fkf_A Thiol-disulfide oxidore 99.9 6.1E-22 2.1E-26 164.9 9.6 122 49-192 3-131 (148)
151 2l5o_A Putative thioredoxin; s 99.9 1.2E-21 4.1E-26 164.4 11.4 123 51-195 2-126 (153)
152 2i3y_A Epididymal secretory gl 99.9 2.7E-21 9.4E-26 172.0 14.1 126 242-379 30-195 (215)
153 3raz_A Thioredoxin-related pro 99.9 9.2E-22 3.2E-26 165.1 10.3 117 247-379 3-124 (151)
154 3or5_A Thiol:disulfide interch 99.9 4E-21 1.4E-25 163.2 14.3 127 241-379 8-135 (165)
155 2f8a_A Glutathione peroxidase 99.9 3.3E-22 1.1E-26 177.4 7.2 138 52-197 21-194 (208)
156 2p5q_A Glutathione peroxidase 99.9 1.4E-21 4.9E-26 166.9 10.7 124 241-379 6-152 (170)
157 2vup_A Glutathione peroxidase- 99.9 1.3E-22 4.4E-27 177.5 4.2 134 49-196 20-171 (190)
158 2ggt_A SCO1 protein homolog, m 99.9 2.6E-21 8.8E-26 164.3 12.2 130 56-196 2-147 (164)
159 2vup_A Glutathione peroxidase- 99.9 8.2E-22 2.8E-26 172.3 9.3 120 242-378 23-168 (190)
160 2rli_A SCO2 protein homolog, m 99.9 1E-20 3.6E-25 161.8 15.8 121 248-379 7-148 (171)
161 3kh7_A Thiol:disulfide interch 99.9 1.4E-21 4.7E-26 168.8 10.3 123 48-196 27-153 (176)
162 3kij_A Probable glutathione pe 99.9 1.6E-21 5.6E-26 168.8 10.7 125 241-379 12-154 (180)
163 3erw_A Sporulation thiol-disul 99.9 1.4E-21 4.7E-26 162.1 9.8 125 49-196 7-135 (145)
164 2r37_A Glutathione peroxidase 99.9 5.1E-21 1.8E-25 169.4 13.6 125 243-379 13-177 (207)
165 2i3y_A Epididymal secretory gl 99.9 7.2E-22 2.4E-26 175.8 8.0 136 52-196 30-197 (215)
166 2b5x_A YKUV protein, TRXY; thi 99.8 5E-21 1.7E-25 159.2 12.4 120 242-379 2-129 (148)
167 2b7k_A SCO1 protein; metalloch 99.8 2.9E-21 9.8E-26 170.3 10.9 136 49-195 11-164 (200)
168 2k6v_A Putative cytochrome C o 99.8 1.9E-21 6.5E-26 166.5 9.3 125 242-379 11-155 (172)
169 3cmi_A Peroxiredoxin HYR1; thi 99.8 1.1E-21 3.7E-26 168.4 7.6 118 243-378 8-151 (171)
170 3or5_A Thiol:disulfide interch 99.8 2.7E-21 9.4E-26 164.2 10.0 130 50-196 7-137 (165)
171 2k6v_A Putative cytochrome C o 99.8 7.5E-22 2.6E-26 169.0 6.3 133 51-196 10-157 (172)
172 3cmi_A Peroxiredoxin HYR1; thi 99.8 2.3E-22 7.9E-27 172.6 2.8 129 53-196 8-154 (171)
173 3kij_A Probable glutathione pe 99.8 1.2E-21 4.1E-26 169.7 7.4 130 52-197 13-157 (180)
174 1i5g_A Tryparedoxin II; electr 99.8 3.6E-21 1.2E-25 160.1 9.9 120 243-378 3-127 (144)
175 2lja_A Putative thiol-disulfid 99.8 4.5E-21 1.6E-25 160.7 10.6 124 50-195 2-128 (152)
176 3ha9_A Uncharacterized thiored 99.8 2.1E-21 7.3E-26 165.3 8.6 114 242-375 12-145 (165)
177 2r37_A Glutathione peroxidase 99.8 1.4E-21 4.9E-26 173.0 7.6 135 53-196 13-179 (207)
178 2hyx_A Protein DIPZ; thioredox 99.8 1.1E-20 3.9E-25 179.8 13.4 123 240-379 50-183 (352)
179 2b7k_A SCO1 protein; metalloch 99.8 1.9E-20 6.4E-25 165.1 13.9 127 242-379 14-163 (200)
180 3ia1_A THIO-disulfide isomeras 99.8 9.4E-21 3.2E-25 159.2 11.3 118 241-379 5-128 (154)
181 3raz_A Thioredoxin-related pro 99.8 2E-21 7E-26 163.0 7.1 121 55-196 3-126 (151)
182 2rli_A SCO2 protein homolog, m 99.8 2.1E-20 7.3E-25 159.8 13.6 128 58-196 7-150 (171)
183 2ls5_A Uncharacterized protein 99.7 1.5E-22 5.3E-27 171.3 0.0 124 240-378 6-132 (159)
184 4evm_A Thioredoxin family prot 99.8 2.5E-20 8.6E-25 152.5 12.9 116 246-379 1-123 (138)
185 2ls5_A Uncharacterized protein 99.7 1.8E-22 6.1E-27 170.9 0.0 126 50-195 6-134 (159)
186 3ha9_A Uncharacterized thiored 99.8 2E-21 6.7E-26 165.5 6.4 120 50-196 10-149 (165)
187 2b5x_A YKUV protein, TRXY; thi 99.8 3.7E-21 1.3E-25 160.0 7.8 122 51-195 1-130 (148)
188 2lja_A Putative thiol-disulfid 99.8 2.7E-20 9.1E-25 156.0 12.1 121 241-378 3-126 (152)
189 2hyx_A Protein DIPZ; thioredox 99.8 1.1E-20 3.9E-25 179.9 10.1 126 49-196 49-185 (352)
190 1lu4_A Soluble secreted antige 99.8 3E-20 1E-24 152.3 11.2 114 245-378 2-116 (136)
191 3ia1_A THIO-disulfide isomeras 99.8 4.5E-21 1.6E-25 161.2 6.0 121 50-196 4-130 (154)
192 1zzo_A RV1677; thioredoxin fol 99.8 4.6E-20 1.6E-24 150.9 11.8 115 244-378 2-118 (136)
193 1o8x_A Tryparedoxin, TRYX, TXN 99.8 1.7E-20 5.9E-25 156.4 8.9 120 242-378 3-127 (146)
194 1i5g_A Tryparedoxin II; electr 99.8 1.7E-20 5.6E-25 156.1 7.8 121 53-194 3-128 (144)
195 4evm_A Thioredoxin family prot 99.8 5.2E-20 1.8E-24 150.6 9.9 118 56-196 1-125 (138)
196 1zzo_A RV1677; thioredoxin fol 99.8 5.7E-20 1.9E-24 150.4 9.3 119 53-196 1-121 (136)
197 1lu4_A Soluble secreted antige 99.8 5.3E-20 1.8E-24 150.8 8.7 114 55-193 2-116 (136)
198 1o73_A Tryparedoxin; electron 99.8 5.4E-20 1.9E-24 152.7 8.5 120 242-378 3-127 (144)
199 2b1k_A Thiol:disulfide interch 99.8 2.7E-19 9.1E-24 152.7 13.0 120 241-379 22-144 (168)
200 3s9f_A Tryparedoxin; thioredox 99.8 1.7E-20 5.7E-25 160.3 5.3 120 242-378 23-147 (165)
201 1kng_A Thiol:disulfide interch 99.8 1.3E-19 4.4E-24 152.3 9.8 119 241-379 8-136 (156)
202 1o8x_A Tryparedoxin, TRYX, TXN 99.8 5.1E-20 1.7E-24 153.6 6.8 122 52-195 3-129 (146)
203 2b1k_A Thiol:disulfide interch 99.8 1.3E-19 4.3E-24 154.7 9.0 124 49-196 20-146 (168)
204 2h30_A Thioredoxin, peptide me 99.8 6.9E-20 2.4E-24 155.4 7.3 118 243-379 16-140 (164)
205 3s9f_A Tryparedoxin; thioredox 99.8 2E-20 6.7E-25 159.8 2.4 124 49-194 20-148 (165)
206 1kng_A Thiol:disulfide interch 99.8 1.2E-19 4E-24 152.6 5.9 122 50-196 7-138 (156)
207 1o73_A Tryparedoxin; electron 99.8 1.2E-19 4.3E-24 150.5 4.8 122 52-195 3-129 (144)
208 2lus_A Thioredoxion; CR-Trp16, 99.6 2.4E-20 8.2E-25 154.5 0.0 118 245-379 2-127 (143)
209 2h30_A Thioredoxin, peptide me 99.8 1.7E-19 5.7E-24 153.1 3.3 120 53-196 16-142 (164)
210 2lus_A Thioredoxion; CR-Trp16, 99.6 2.3E-19 7.7E-24 148.6 0.0 116 55-192 2-125 (143)
211 3idv_A Protein disulfide-isome 99.7 1.4E-16 4.6E-21 143.8 10.9 185 78-375 30-218 (241)
212 4h86_A Peroxiredoxin type-2; o 99.6 5.3E-15 1.8E-19 127.1 10.0 137 49-191 24-177 (199)
213 1a8l_A Protein disulfide oxido 99.4 9E-13 3.1E-17 117.6 10.9 75 269-379 133-210 (226)
214 2l57_A Uncharacterized protein 99.4 6.3E-13 2.2E-17 107.4 7.1 97 246-379 5-101 (126)
215 2ju5_A Thioredoxin disulfide i 99.4 2.9E-13 9.8E-18 113.8 4.3 106 242-377 25-133 (154)
216 4h86_A Peroxiredoxin type-2; o 99.3 1.3E-11 4.6E-16 106.0 12.0 118 260-381 57-182 (199)
217 2fwh_A Thiol:disulfide interch 99.3 5E-13 1.7E-17 109.4 2.3 97 242-374 5-105 (134)
218 2fwh_A Thiol:disulfide interch 99.3 4.5E-13 1.6E-17 109.7 1.1 105 51-196 4-114 (134)
219 3ul3_B Thioredoxin, thioredoxi 99.2 2.1E-11 7.1E-16 98.8 8.6 94 244-379 21-114 (128)
220 2ju5_A Thioredoxin disulfide i 99.2 7.5E-13 2.6E-17 111.2 -0.1 109 52-196 25-136 (154)
221 2l57_A Uncharacterized protein 99.2 2.8E-12 9.4E-17 103.6 3.2 99 56-196 5-103 (126)
222 3f9u_A Putative exported cytoc 99.2 3.8E-13 1.3E-17 114.9 -2.4 108 260-378 37-148 (172)
223 3hxs_A Thioredoxin, TRXP; elec 99.2 5.2E-11 1.8E-15 97.9 9.6 83 257-375 38-120 (141)
224 2hls_A Protein disulfide oxido 99.2 6.8E-11 2.3E-15 106.9 10.3 71 266-374 134-207 (243)
225 3uem_A Protein disulfide-isome 99.2 5.5E-11 1.9E-15 113.7 9.0 44 269-313 266-310 (361)
226 3fk8_A Disulphide isomerase; A 99.2 3.6E-11 1.2E-15 97.9 6.5 89 263-381 22-112 (133)
227 2ywm_A Glutaredoxin-like prote 99.2 5.1E-11 1.7E-15 106.4 8.0 65 269-373 135-199 (229)
228 2kuc_A Putative disulphide-iso 99.1 9.2E-11 3.2E-15 94.9 6.0 86 260-379 17-105 (130)
229 1z6n_A Hypothetical protein PA 99.1 1.2E-10 3.9E-15 99.1 6.6 83 262-378 46-128 (167)
230 3f9u_A Putative exported cytoc 99.1 1.5E-11 5.3E-16 104.8 1.0 110 71-196 38-151 (172)
231 2pu9_C TRX-F, thioredoxin F-ty 99.1 4.5E-10 1.5E-14 88.2 9.0 76 267-379 21-96 (111)
232 2voc_A Thioredoxin; electron t 99.1 8.6E-10 2.9E-14 86.9 10.3 74 269-379 16-89 (112)
233 3hxs_A Thioredoxin, TRXP; elec 99.0 5E-10 1.7E-14 91.9 7.7 86 68-195 39-124 (141)
234 3p2a_A Thioredoxin 2, putative 99.0 8.4E-10 2.9E-14 91.5 8.6 97 243-379 31-127 (148)
235 3qfa_C Thioredoxin; protein-pr 99.0 5.5E-10 1.9E-14 88.7 6.9 76 266-379 27-102 (116)
236 3zzx_A Thioredoxin; oxidoreduc 99.0 1E-09 3.5E-14 85.8 8.0 77 265-379 15-91 (105)
237 3d6i_A Monothiol glutaredoxin- 99.0 1.7E-09 5.7E-14 84.9 9.4 75 269-379 20-94 (112)
238 3d22_A TRXH4, thioredoxin H-ty 99.0 5E-10 1.7E-14 91.7 6.5 80 262-379 38-117 (139)
239 1faa_A Thioredoxin F; electron 99.0 1.2E-09 4.1E-14 87.5 8.5 76 267-379 34-109 (124)
240 3ul3_B Thioredoxin, thioredoxi 99.0 2.9E-10 9.9E-15 91.9 4.7 98 52-196 19-116 (128)
241 1xfl_A Thioredoxin H1; AT3G510 99.0 4.9E-10 1.7E-14 90.2 5.9 76 266-379 34-109 (124)
242 3f3q_A Thioredoxin-1; His TAG, 99.0 1.3E-09 4.3E-14 85.5 7.8 75 268-380 22-96 (109)
243 1nsw_A Thioredoxin, TRX; therm 99.0 2.6E-09 9E-14 82.6 9.0 74 269-379 16-89 (105)
244 3cxg_A Putative thioredoxin; m 98.9 1E-09 3.5E-14 89.5 6.5 83 259-379 29-114 (133)
245 2l5l_A Thioredoxin; structural 98.9 2.1E-09 7.2E-14 87.8 8.3 71 269-375 37-107 (136)
246 2b5e_A Protein disulfide-isome 98.9 7.8E-10 2.7E-14 110.5 6.5 46 79-125 30-75 (504)
247 3die_A Thioredoxin, TRX; elect 98.9 5.4E-09 1.8E-13 80.8 9.9 74 269-379 18-91 (106)
248 3q6o_A Sulfhydryl oxidase 1; p 98.9 4.5E-09 1.5E-13 94.8 10.8 44 79-123 29-74 (244)
249 1t00_A Thioredoxin, TRX; redox 98.9 4.4E-09 1.5E-13 82.4 9.2 74 269-379 22-95 (112)
250 3apo_A DNAJ homolog subfamily 98.9 1.7E-09 5.7E-14 113.9 8.4 72 269-377 674-745 (780)
251 1w4v_A Thioredoxin, mitochondr 98.9 4.4E-09 1.5E-13 83.7 8.9 74 269-379 30-103 (119)
252 3qou_A Protein YBBN; thioredox 98.9 3.5E-09 1.2E-13 97.7 9.2 74 269-379 25-98 (287)
253 1thx_A Thioredoxin, thioredoxi 98.9 7.1E-09 2.4E-13 81.4 9.8 73 269-378 24-96 (115)
254 3fk8_A Disulphide isomerase; A 98.9 1.3E-09 4.6E-14 88.4 5.6 87 73-194 22-110 (133)
255 3gix_A Thioredoxin-like protei 98.9 3.3E-09 1.1E-13 88.3 8.1 70 269-375 22-91 (149)
256 2ppt_A Thioredoxin-2; thiredox 98.9 3.4E-09 1.2E-13 88.8 8.2 73 269-378 63-135 (155)
257 1dby_A Chloroplast thioredoxin 98.9 6.7E-09 2.3E-13 80.6 9.3 74 269-379 18-91 (107)
258 1ep7_A Thioredoxin CH1, H-type 98.9 5.7E-09 1.9E-13 81.7 8.8 73 270-379 24-96 (112)
259 4euy_A Uncharacterized protein 98.9 3E-09 1E-13 82.6 6.9 73 269-379 17-89 (105)
260 1x5d_A Protein disulfide-isome 98.9 9.4E-09 3.2E-13 83.1 10.2 74 269-378 24-100 (133)
261 3t58_A Sulfhydryl oxidase 1; o 98.9 7.3E-09 2.5E-13 103.5 11.4 72 80-189 30-106 (519)
262 3apo_A DNAJ homolog subfamily 98.9 3E-09 1E-13 111.9 8.8 153 75-316 450-607 (780)
263 2dj0_A Thioredoxin-related tra 98.9 4.1E-09 1.4E-13 86.1 7.7 82 267-378 23-104 (137)
264 3tco_A Thioredoxin (TRXA-1); d 98.9 7.9E-09 2.7E-13 80.2 9.0 74 269-379 20-93 (109)
265 2i4a_A Thioredoxin; acidophIle 98.9 9.2E-09 3.2E-13 79.6 9.4 73 269-378 19-91 (107)
266 2wz9_A Glutaredoxin-3; protein 98.9 7.1E-09 2.4E-13 86.5 9.3 73 269-379 31-103 (153)
267 1gh2_A Thioredoxin-like protei 98.9 6.6E-09 2.3E-13 80.8 8.5 73 269-379 20-92 (107)
268 2vlu_A Thioredoxin, thioredoxi 98.9 6.6E-09 2.2E-13 82.8 8.6 73 269-379 33-105 (122)
269 2trx_A Thioredoxin; electron t 98.9 7.5E-09 2.6E-13 80.4 8.7 73 269-378 19-91 (108)
270 2f51_A Thioredoxin; electron t 98.9 7.8E-09 2.7E-13 82.3 8.8 84 259-379 9-98 (118)
271 3m9j_A Thioredoxin; oxidoreduc 98.9 7E-09 2.4E-13 80.1 8.3 76 266-379 16-91 (105)
272 2j23_A Thioredoxin; immune pro 98.9 5.4E-09 1.8E-13 83.5 7.7 75 269-379 32-106 (121)
273 3emx_A Thioredoxin; structural 98.9 3.8E-09 1.3E-13 86.2 6.9 80 269-379 31-110 (135)
274 2pu9_C TRX-F, thioredoxin F-ty 98.9 3.3E-09 1.1E-13 83.2 6.2 78 76-195 20-97 (111)
275 1xwb_A Thioredoxin; dimerizati 98.9 8E-09 2.7E-13 79.9 8.4 77 266-379 16-92 (106)
276 2o8v_B Thioredoxin 1; disulfid 98.8 3.9E-09 1.3E-13 85.4 6.7 74 269-379 39-112 (128)
277 2xc2_A Thioredoxinn; oxidoredu 98.8 5.2E-09 1.8E-13 82.9 7.3 76 265-379 28-103 (117)
278 2e0q_A Thioredoxin; electron t 98.8 1E-08 3.4E-13 78.7 8.7 73 269-379 15-87 (104)
279 1x5e_A Thioredoxin domain cont 98.8 9.2E-09 3.1E-13 82.6 8.8 68 269-373 22-89 (126)
280 2oe3_A Thioredoxin-3; electron 98.8 1E-08 3.5E-13 81.1 8.8 73 269-379 29-101 (114)
281 2kuc_A Putative disulphide-iso 98.8 5.6E-10 1.9E-14 90.2 1.4 87 71-196 18-107 (130)
282 2vim_A Thioredoxin, TRX; thior 98.8 1.2E-08 4.1E-13 78.5 8.8 76 266-379 15-90 (104)
283 2dj3_A Protein disulfide-isome 98.8 2.4E-09 8.1E-14 86.8 4.9 81 259-374 13-95 (133)
284 1ti3_A Thioredoxin H, PTTRXH1; 98.8 9.3E-09 3.2E-13 80.5 8.2 74 268-379 24-97 (113)
285 2lst_A Thioredoxin; structural 98.3 3.9E-10 1.3E-14 91.2 0.0 85 260-378 9-99 (130)
286 2dml_A Protein disulfide-isome 98.8 7.4E-09 2.5E-13 83.5 7.4 74 269-378 34-107 (130)
287 2voc_A Thioredoxin; electron t 98.8 7.9E-09 2.7E-13 81.2 7.2 76 79-196 16-91 (112)
288 1z6n_A Hypothetical protein PA 98.8 1.1E-09 3.6E-14 93.1 2.1 48 74-124 48-95 (167)
289 1syr_A Thioredoxin; SGPP, stru 98.8 1.5E-08 5.2E-13 79.5 8.6 73 269-379 25-97 (112)
290 3gnj_A Thioredoxin domain prot 98.8 1.8E-08 6E-13 78.6 8.9 74 269-379 21-94 (111)
291 1r26_A Thioredoxin; redox-acti 98.8 1.6E-08 5.3E-13 81.5 8.7 73 269-379 36-108 (125)
292 2yzu_A Thioredoxin; redox prot 98.8 1.9E-08 6.6E-13 77.9 9.0 74 269-379 17-90 (109)
293 3hz4_A Thioredoxin; NYSGXRC, P 98.8 1.6E-08 5.6E-13 82.9 8.9 74 269-379 23-96 (140)
294 1qgv_A Spliceosomal protein U5 98.8 7.8E-09 2.7E-13 85.2 6.9 71 269-376 22-92 (142)
295 2vm1_A Thioredoxin, thioredoxi 98.8 1.3E-08 4.5E-13 80.3 7.8 73 269-379 27-99 (118)
296 2l6c_A Thioredoxin; oxidoreduc 98.8 9.5E-09 3.3E-13 80.6 6.9 73 269-379 18-90 (110)
297 2dj1_A Protein disulfide-isome 98.8 6.2E-09 2.1E-13 85.1 6.1 73 269-378 33-107 (140)
298 1sen_A Thioredoxin-like protei 98.8 4.4E-10 1.5E-14 95.2 -1.1 95 247-378 27-121 (164)
299 1zma_A Bacterocin transport ac 98.8 1.3E-08 4.5E-13 80.7 6.8 77 269-378 28-104 (118)
300 1fb6_A Thioredoxin M; electron 98.7 3.4E-08 1.2E-12 76.1 8.9 74 269-379 17-90 (105)
301 3p2a_A Thioredoxin 2, putative 98.7 5.9E-09 2E-13 86.3 4.5 66 53-123 31-96 (148)
302 3qfa_C Thioredoxin; protein-pr 98.7 5.4E-09 1.9E-13 82.9 4.0 78 75-195 26-103 (116)
303 1faa_A Thioredoxin F; electron 98.7 1.2E-08 4.1E-13 81.5 6.1 78 76-195 33-110 (124)
304 3d6i_A Monothiol glutaredoxin- 98.7 1.7E-08 5.8E-13 79.1 6.5 45 79-124 20-64 (112)
305 3d22_A TRXH4, thioredoxin H-ty 98.7 5.1E-09 1.8E-13 85.6 3.5 82 71-195 37-118 (139)
306 1wou_A Thioredoxin -related pr 98.7 1.6E-08 5.3E-13 81.1 6.3 80 266-374 20-106 (123)
307 3apq_A DNAJ homolog subfamily 98.7 7.3E-09 2.5E-13 91.2 4.6 91 248-378 95-185 (210)
308 1sen_A Thioredoxin-like protei 98.7 1.1E-09 3.6E-14 92.8 -1.0 62 57-124 27-88 (164)
309 2i1u_A Thioredoxin, TRX, MPT46 98.7 6.7E-08 2.3E-12 76.6 9.5 74 269-379 29-102 (121)
310 3uvt_A Thioredoxin domain-cont 98.7 2.4E-08 8.3E-13 77.7 6.8 75 269-379 20-96 (111)
311 2vlu_A Thioredoxin, thioredoxi 98.7 7.8E-09 2.7E-13 82.4 3.9 97 53-195 8-106 (122)
312 3cxg_A Putative thioredoxin; m 98.7 7.6E-09 2.6E-13 84.2 3.7 51 69-123 29-79 (133)
313 2lst_A Thioredoxin; structural 98.1 1.9E-09 6.6E-14 87.1 0.0 88 70-196 9-102 (130)
314 1xfl_A Thioredoxin H1; AT3G510 98.7 2.3E-08 7.9E-13 80.2 6.3 74 78-194 36-109 (124)
315 3dxb_A Thioredoxin N-terminall 98.7 3.6E-08 1.2E-12 87.6 8.2 74 269-379 29-102 (222)
316 2l5l_A Thioredoxin; structural 98.7 2.3E-08 7.8E-13 81.5 6.3 70 79-189 37-106 (136)
317 3aps_A DNAJ homolog subfamily 98.7 3.1E-08 1.1E-12 78.8 7.0 69 269-373 20-88 (122)
318 3zzx_A Thioredoxin; oxidoreduc 98.7 2.4E-08 8.3E-13 77.8 6.2 78 75-195 15-92 (105)
319 2djj_A PDI, protein disulfide- 98.7 1.5E-08 5.1E-13 80.5 5.0 54 259-313 13-71 (121)
320 3h79_A Thioredoxin-like protei 98.7 4.8E-08 1.6E-12 78.5 8.0 70 269-373 32-105 (127)
321 1nsw_A Thioredoxin, TRX; therm 98.7 2.4E-08 8.4E-13 77.0 5.7 76 79-196 16-91 (105)
322 3idv_A Protein disulfide-isome 98.7 5.6E-08 1.9E-12 86.9 8.8 81 259-375 21-103 (241)
323 3f3q_A Thioredoxin-1; His TAG, 98.7 2.4E-08 8.2E-13 78.1 5.5 74 79-195 23-96 (109)
324 1oaz_A Thioredoxin 1; immune s 98.6 3.5E-08 1.2E-12 79.1 6.4 74 269-379 20-107 (123)
325 1t00_A Thioredoxin, TRX; redox 98.6 3.3E-08 1.1E-12 77.3 5.8 76 79-196 22-97 (112)
326 3gix_A Thioredoxin-like protei 98.6 2.4E-08 8.2E-13 83.0 5.0 71 79-191 22-92 (149)
327 2ppt_A Thioredoxin-2; thiredox 98.6 1.6E-08 5.5E-13 84.6 3.9 75 79-195 63-137 (155)
328 1dby_A Chloroplast thioredoxin 98.6 5.3E-08 1.8E-12 75.4 6.6 76 79-196 18-93 (107)
329 1v98_A Thioredoxin; oxidoreduc 98.6 1.1E-07 3.9E-12 77.6 8.8 84 259-379 39-122 (140)
330 3die_A Thioredoxin, TRX; elect 98.6 4.6E-08 1.6E-12 75.5 6.1 44 79-124 18-61 (106)
331 1thx_A Thioredoxin, thioredoxi 98.6 6.4E-08 2.2E-12 75.8 7.0 75 79-195 24-98 (115)
332 1ep7_A Thioredoxin CH1, H-type 98.6 5.6E-08 1.9E-12 75.9 6.6 74 80-195 24-97 (112)
333 1w4v_A Thioredoxin, mitochondr 98.6 4.3E-08 1.5E-12 77.9 5.8 75 79-195 30-104 (119)
334 2dj0_A Thioredoxin-related tra 98.6 5.3E-08 1.8E-12 79.4 6.1 48 76-124 22-69 (137)
335 3qou_A Protein YBBN; thioredox 98.6 3.8E-08 1.3E-12 90.7 5.9 77 78-196 24-100 (287)
336 2i4a_A Thioredoxin; acidophIle 98.6 7.1E-08 2.4E-12 74.5 6.3 75 79-195 19-93 (107)
337 2xc2_A Thioredoxinn; oxidoredu 98.6 4.7E-08 1.6E-12 77.2 5.2 76 75-194 28-103 (117)
338 1xwb_A Thioredoxin; dimerizati 98.6 8.2E-08 2.8E-12 74.0 6.4 47 75-123 15-61 (106)
339 2trx_A Thioredoxin; electron t 98.6 6.7E-08 2.3E-12 74.9 5.9 75 79-195 19-93 (108)
340 2wz9_A Glutaredoxin-3; protein 98.6 6.3E-08 2.2E-12 80.7 6.0 73 79-194 31-103 (153)
341 2dml_A Protein disulfide-isome 98.6 1.2E-07 4E-12 76.3 7.4 70 79-189 34-103 (130)
342 2j23_A Thioredoxin; immune pro 98.6 4.7E-08 1.6E-12 77.9 4.9 45 79-124 32-76 (121)
343 2oe3_A Thioredoxin-3; electron 98.6 7.9E-08 2.7E-12 75.9 6.1 42 79-123 29-70 (114)
344 4euy_A Uncharacterized protein 98.6 4.1E-08 1.4E-12 76.0 4.2 42 79-123 17-58 (105)
345 1mek_A Protein disulfide isome 98.6 2.4E-08 8.3E-13 78.8 2.9 70 269-374 23-94 (120)
346 2o8v_B Thioredoxin 1; disulfid 98.6 4.1E-08 1.4E-12 79.2 4.3 75 79-195 39-113 (128)
347 2l6c_A Thioredoxin; oxidoreduc 98.6 5.8E-08 2E-12 76.0 5.0 75 79-196 18-92 (110)
348 3ira_A Conserved protein; meth 98.6 5.6E-08 1.9E-12 82.7 5.3 88 260-376 29-120 (173)
349 2f51_A Thioredoxin; electron t 98.5 5.7E-08 2E-12 77.1 4.9 53 69-124 9-64 (118)
350 2vim_A Thioredoxin, TRX; thior 98.5 7.6E-08 2.6E-12 73.9 5.4 45 76-123 15-59 (104)
351 3tco_A Thioredoxin (TRXA-1); d 98.5 8.6E-08 2.9E-12 74.2 5.7 76 79-196 20-95 (109)
352 1gh2_A Thioredoxin-like protei 98.5 7.5E-08 2.5E-12 74.7 5.4 43 79-124 20-62 (107)
353 3emx_A Thioredoxin; structural 98.5 3E-08 1E-12 80.8 3.1 80 82-196 33-112 (135)
354 3m9j_A Thioredoxin; oxidoreduc 98.5 7.3E-08 2.5E-12 74.3 5.2 46 75-123 15-60 (105)
355 1syr_A Thioredoxin; SGPP, stru 98.5 1.3E-07 4.4E-12 74.1 6.6 43 79-124 25-67 (112)
356 2e0q_A Thioredoxin; electron t 98.5 8E-08 2.7E-12 73.6 5.3 74 79-195 15-88 (104)
357 3t58_A Sulfhydryl oxidase 1; o 98.5 1.4E-07 4.8E-12 94.2 8.4 77 269-378 29-110 (519)
358 1x5d_A Protein disulfide-isome 98.5 1.2E-07 4.3E-12 76.3 6.7 71 79-190 24-97 (133)
359 1x5e_A Thioredoxin domain cont 98.5 9.7E-08 3.3E-12 76.5 5.8 43 80-123 22-64 (126)
360 3iv4_A Putative oxidoreductase 98.5 3.1E-07 1E-11 71.7 8.2 77 270-381 24-101 (112)
361 2dbc_A PDCL2, unnamed protein 98.5 8.5E-08 2.9E-12 78.2 5.3 70 269-379 29-98 (135)
362 2yj7_A LPBCA thioredoxin; oxid 97.9 1.3E-08 4.4E-13 78.4 0.0 73 269-378 18-90 (106)
363 1fo5_A Thioredoxin; disulfide 98.5 1.9E-07 6.4E-12 69.0 6.4 41 271-313 3-43 (85)
364 1zma_A Bacterocin transport ac 98.5 1.1E-07 3.9E-12 75.2 5.5 79 79-195 28-106 (118)
365 2vm1_A Thioredoxin, thioredoxi 98.5 1.2E-07 4.1E-12 74.7 5.4 42 79-123 27-68 (118)
366 1r26_A Thioredoxin; redox-acti 98.5 1.3E-07 4.4E-12 76.0 5.5 73 79-194 36-108 (125)
367 3ph9_A Anterior gradient prote 98.5 1.9E-08 6.6E-13 83.7 0.6 82 263-378 37-118 (151)
368 2dj3_A Protein disulfide-isome 98.5 3.4E-07 1.2E-11 73.9 8.0 54 69-123 13-68 (133)
369 3q6o_A Sulfhydryl oxidase 1; p 98.5 2.7E-07 9.2E-12 83.0 8.2 68 269-369 29-98 (244)
370 3apq_A DNAJ homolog subfamily 98.5 5.7E-08 1.9E-12 85.4 3.5 92 58-194 95-186 (210)
371 1ti3_A Thioredoxin H, PTTRXH1; 98.5 9.9E-08 3.4E-12 74.5 4.4 43 78-123 24-66 (113)
372 1nho_A Probable thioredoxin; b 98.5 1.8E-07 6.2E-12 69.0 5.6 63 272-373 3-65 (85)
373 1wmj_A Thioredoxin H-type; str 98.5 1.6E-08 5.3E-13 81.4 -0.4 77 264-378 30-106 (130)
374 2yzu_A Thioredoxin; redox prot 98.5 2E-07 6.7E-12 72.1 5.8 44 79-124 17-60 (109)
375 3kp8_A Vkorc1/thioredoxin doma 98.5 8.3E-09 2.9E-13 80.6 -2.1 75 260-373 2-76 (106)
376 3gnj_A Thioredoxin domain prot 98.4 2.2E-07 7.6E-12 72.2 5.8 43 79-123 21-63 (111)
377 2av4_A Thioredoxin-like protei 98.4 3.4E-07 1.2E-11 75.8 7.1 70 269-375 40-109 (160)
378 1wou_A Thioredoxin -related pr 98.4 1.2E-07 4.1E-12 75.8 4.3 81 75-189 19-106 (123)
379 3hz4_A Thioredoxin; NYSGXRC, P 98.4 2E-07 7E-12 76.2 5.6 43 79-123 23-65 (140)
380 1a0r_P Phosducin, MEKA, PP33; 98.4 1.6E-07 5.5E-12 84.5 5.3 71 269-378 132-202 (245)
381 2dj1_A Protein disulfide-isome 98.4 7.5E-08 2.6E-12 78.5 2.9 43 79-122 33-77 (140)
382 1fb6_A Thioredoxin M; electron 98.4 2.8E-07 9.5E-12 70.8 6.0 76 79-196 17-92 (105)
383 2qsi_A Putative hydrogenase ex 98.4 7.2E-07 2.5E-11 72.4 8.0 71 271-378 34-106 (137)
384 2qgv_A Hydrogenase-1 operon pr 98.4 3.3E-07 1.1E-11 74.7 5.7 74 269-378 33-108 (140)
385 1ilo_A Conserved hypothetical 98.4 1E-06 3.4E-11 63.7 7.6 62 273-376 2-63 (77)
386 3ed3_A Protein disulfide-isome 98.4 8.8E-07 3E-11 82.2 8.9 69 269-372 34-102 (298)
387 3dxb_A Thioredoxin N-terminall 98.4 3.3E-07 1.1E-11 81.2 5.7 44 79-124 29-72 (222)
388 2i1u_A Thioredoxin, TRX, MPT46 98.4 5.1E-07 1.8E-11 71.4 6.0 44 79-124 29-72 (121)
389 2yj7_A LPBCA thioredoxin; oxid 97.7 5.3E-08 1.8E-12 74.9 0.0 43 79-123 18-60 (106)
390 2djj_A PDI, protein disulfide- 98.3 6E-07 2.1E-11 71.0 5.9 54 69-123 13-71 (121)
391 1mek_A Protein disulfide isome 98.3 2.4E-07 8.4E-12 72.9 3.5 43 79-122 23-67 (120)
392 1oaz_A Thioredoxin 1; immune s 98.3 5.5E-07 1.9E-11 72.0 5.3 76 79-196 20-109 (123)
393 2es7_A Q8ZP25_salty, putative 98.3 3E-07 1E-11 75.7 3.8 71 271-379 35-109 (142)
394 1qgv_A Spliceosomal protein U5 98.3 7.4E-07 2.5E-11 73.2 5.9 44 79-124 22-65 (142)
395 3uvt_A Thioredoxin domain-cont 98.3 3.9E-07 1.3E-11 70.7 3.9 43 80-123 21-65 (111)
396 3ph9_A Anterior gradient prote 98.3 2.5E-07 8.7E-12 76.9 2.8 83 74-195 38-120 (151)
397 3h79_A Thioredoxin-like protei 98.3 1.3E-06 4.6E-11 69.9 7.0 44 79-123 32-79 (127)
398 1wmj_A Thioredoxin H-type; str 98.3 1.4E-07 4.8E-12 75.7 0.4 43 78-123 34-76 (130)
399 1v98_A Thioredoxin; oxidoreduc 98.2 1.2E-06 4.1E-11 71.4 5.8 44 79-124 49-92 (140)
400 1sji_A Calsequestrin 2, calseq 98.2 4.2E-06 1.4E-10 79.3 10.1 72 269-378 27-105 (350)
401 3aps_A DNAJ homolog subfamily 98.2 2E-06 6.9E-11 68.1 6.4 44 79-124 20-63 (122)
402 3evi_A Phosducin-like protein 98.2 2.5E-06 8.5E-11 67.8 6.9 69 270-379 23-91 (118)
403 2dbc_A PDCL2, unnamed protein 98.2 1.2E-06 4.1E-11 71.3 5.1 43 79-124 29-71 (135)
404 3f8u_A Protein disulfide-isome 98.2 7.9E-07 2.7E-11 88.0 4.8 69 269-373 369-438 (481)
405 2r2j_A Thioredoxin domain-cont 98.2 6E-06 2.1E-10 79.3 10.7 72 269-376 21-97 (382)
406 3qcp_A QSOX from trypanosoma b 98.2 7.8E-07 2.7E-11 87.0 4.3 69 269-372 41-116 (470)
407 1nho_A Probable thioredoxin; b 98.2 1.7E-06 5.7E-11 63.7 4.8 40 82-123 3-42 (85)
408 1fo5_A Thioredoxin; disulfide 98.2 1.7E-06 5.9E-11 63.6 4.8 42 81-124 3-44 (85)
409 2trc_P Phosducin, MEKA, PP33; 98.2 2E-06 7E-11 75.9 5.9 71 269-378 119-189 (217)
410 3gyk_A 27KDA outer membrane pr 98.1 1.5E-06 5E-11 73.8 4.2 49 260-311 12-60 (175)
411 3kp8_A Vkorc1/thioredoxin doma 98.1 9.7E-08 3.3E-12 74.5 -2.9 39 71-110 3-41 (106)
412 3ed3_A Protein disulfide-isome 98.1 3.4E-06 1.2E-10 78.2 6.5 43 79-123 34-76 (298)
413 1a8l_A Protein disulfide oxido 98.1 7.9E-06 2.7E-10 72.1 8.1 42 81-123 135-179 (226)
414 2b5e_A Protein disulfide-isome 98.0 8E-06 2.7E-10 81.3 7.7 74 269-378 30-105 (504)
415 2av4_A Thioredoxin-like protei 98.0 6.2E-06 2.1E-10 68.2 5.5 44 79-124 40-83 (160)
416 3f8u_A Protein disulfide-isome 98.0 1.3E-05 4.3E-10 79.3 8.4 73 269-378 20-92 (481)
417 2es7_A Q8ZP25_salty, putative 97.9 3.1E-06 1.1E-10 69.5 2.7 72 81-195 35-110 (142)
418 2qgv_A Hydrogenase-1 operon pr 97.9 5E-06 1.7E-10 67.7 3.7 77 79-196 33-111 (140)
419 1eej_A Thiol:disulfide interch 97.9 5.6E-06 1.9E-10 73.0 4.3 45 263-312 79-123 (216)
420 3ira_A Conserved protein; meth 97.9 4.1E-06 1.4E-10 71.1 3.3 53 70-124 29-84 (173)
421 3iv4_A Putative oxidoreductase 97.9 8.8E-06 3E-10 63.4 4.6 40 80-123 24-63 (112)
422 1ilo_A Conserved hypothetical 97.9 1.3E-05 4.6E-10 57.6 5.3 36 83-120 2-37 (77)
423 2qsi_A Putative hydrogenase ex 97.9 1.6E-05 5.5E-10 64.4 5.8 74 81-196 34-109 (137)
424 2dlx_A UBX domain-containing p 97.8 6.1E-05 2.1E-09 62.5 8.7 76 268-377 40-119 (153)
425 3dml_A Putative uncharacterize 97.8 5.1E-06 1.7E-10 65.5 2.0 76 269-378 17-93 (116)
426 1sji_A Calsequestrin 2, calseq 97.8 2.3E-05 7.8E-10 74.2 6.8 44 79-124 27-77 (350)
427 1a0r_P Phosducin, MEKA, PP33; 97.8 9.4E-06 3.2E-10 72.9 3.5 42 79-123 132-173 (245)
428 3ga4_A Dolichyl-diphosphooligo 97.8 8.1E-05 2.8E-09 63.2 8.8 44 270-314 37-91 (178)
429 3hd5_A Thiol:disulfide interch 97.7 2E-05 6.8E-10 68.0 4.3 43 269-313 24-66 (195)
430 2r2j_A Thioredoxin domain-cont 97.6 8E-05 2.7E-09 71.3 7.2 45 79-124 21-70 (382)
431 1eej_A Thiol:disulfide interch 97.6 1.4E-05 4.7E-10 70.5 1.4 46 72-122 78-123 (216)
432 3h93_A Thiol:disulfide interch 97.6 4.9E-05 1.7E-09 65.3 4.8 42 269-312 24-65 (192)
433 2hls_A Protein disulfide oxido 97.6 0.00013 4.6E-09 65.3 7.7 46 77-123 135-183 (243)
434 3gyk_A 27KDA outer membrane pr 97.5 2.5E-05 8.6E-10 66.0 2.1 49 70-121 12-60 (175)
435 3evi_A Phosducin-like protein 97.5 6.2E-05 2.1E-09 59.6 4.1 42 80-124 23-64 (118)
436 2trc_P Phosducin, MEKA, PP33; 97.5 5.9E-05 2E-09 66.4 4.2 42 79-123 119-160 (217)
437 3qcp_A QSOX from trypanosoma b 97.5 0.0001 3.5E-09 72.0 6.2 45 79-124 41-92 (470)
438 2e7p_A Glutaredoxin; thioredox 97.5 0.00011 3.7E-09 57.4 5.3 27 269-297 18-44 (116)
439 1v58_A Thiol:disulfide interch 97.5 0.00019 6.4E-09 64.3 7.3 102 262-373 89-212 (241)
440 3us3_A Calsequestrin-1; calciu 97.5 0.00046 1.6E-08 65.7 10.1 70 269-374 29-104 (367)
441 2znm_A Thiol:disulfide interch 97.5 0.00012 4E-09 63.0 5.4 42 269-312 21-62 (195)
442 2k8s_A Thioredoxin; dimer, str 97.4 0.00031 1.1E-08 51.0 6.4 64 274-375 4-67 (80)
443 3dml_A Putative uncharacterize 97.3 2.8E-05 9.7E-10 61.2 -0.0 79 79-196 17-96 (116)
444 1z6m_A Conserved hypothetical 97.3 0.00072 2.5E-08 56.9 8.7 50 262-312 19-69 (175)
445 2rem_A Disulfide oxidoreductas 97.3 0.00026 8.9E-09 60.6 5.1 42 269-312 24-65 (193)
446 1t3b_A Thiol:disulfide interch 97.1 0.00038 1.3E-08 60.8 4.7 38 269-311 85-122 (211)
447 3uem_A Protein disulfide-isome 97.1 0.00038 1.3E-08 65.8 5.0 44 79-123 266-310 (361)
448 3ga4_A Dolichyl-diphosphooligo 97.0 0.0013 4.4E-08 55.7 6.9 32 79-111 36-74 (178)
449 2ywm_A Glutaredoxin-like prote 97.0 0.0011 3.8E-08 58.3 6.7 41 80-123 136-176 (229)
450 1ego_A Glutaredoxin; electron 97.0 0.0016 5.5E-08 47.4 6.5 37 274-313 3-39 (85)
451 1v58_A Thiol:disulfide interch 97.0 0.00041 1.4E-08 62.0 3.6 47 72-122 89-135 (241)
452 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.0024 8.1E-08 63.7 8.4 43 268-313 115-157 (521)
453 2znm_A Thiol:disulfide interch 96.8 0.00073 2.5E-08 57.9 3.6 42 79-122 21-62 (195)
454 2djk_A PDI, protein disulfide- 96.8 0.0015 5.1E-08 52.4 5.2 43 269-314 22-64 (133)
455 3kp9_A Vkorc1/thioredoxin doma 96.7 0.00053 1.8E-08 62.8 2.4 37 262-299 189-225 (291)
456 1t3b_A Thiol:disulfide interch 96.7 0.00087 3E-08 58.5 3.2 38 79-121 85-122 (211)
457 2dlx_A UBX domain-containing p 96.6 0.0048 1.7E-07 50.9 7.4 44 79-124 41-87 (153)
458 2e7p_A Glutaredoxin; thioredox 96.5 0.0021 7.3E-08 49.8 4.3 27 79-107 18-44 (116)
459 3hd5_A Thiol:disulfide interch 96.4 0.002 6.7E-08 55.2 3.9 43 79-123 24-66 (195)
460 1ttz_A Conserved hypothetical 96.4 0.0048 1.6E-07 45.7 5.2 23 274-297 3-25 (87)
461 1wjk_A C330018D20RIK protein; 96.4 0.0014 4.7E-08 49.9 2.1 39 270-314 15-53 (100)
462 1ego_A Glutaredoxin; electron 96.2 0.0022 7.5E-08 46.7 2.7 38 84-124 3-40 (85)
463 2rem_A Disulfide oxidoreductas 96.2 0.0023 7.9E-08 54.5 3.2 42 79-122 24-65 (193)
464 1wjk_A C330018D20RIK protein; 95.9 0.0021 7.3E-08 48.8 1.3 39 80-124 15-53 (100)
465 3us3_A Calsequestrin-1; calciu 95.9 0.014 4.8E-07 55.3 7.1 45 79-124 29-79 (367)
466 2fgx_A Putative thioredoxin; N 95.9 0.0057 1.9E-07 47.2 3.5 39 82-124 30-68 (107)
467 2fgx_A Putative thioredoxin; N 95.8 0.0047 1.6E-07 47.6 2.8 39 272-314 30-68 (107)
468 1z6m_A Conserved hypothetical 95.6 0.021 7E-07 47.7 6.4 51 71-122 18-69 (175)
469 3hz8_A Thiol:disulfide interch 95.6 0.0069 2.4E-07 51.9 3.4 43 269-313 23-65 (193)
470 3h93_A Thiol:disulfide interch 95.6 0.0088 3E-07 50.9 3.9 42 79-122 24-65 (192)
471 1h75_A Glutaredoxin-like prote 95.4 0.015 5.2E-07 41.6 4.3 33 274-314 3-35 (81)
472 2k8s_A Thioredoxin; dimer, str 95.3 0.0041 1.4E-07 44.8 0.8 36 84-123 4-39 (80)
473 2qc7_A ERP31, ERP28, endoplasm 95.3 0.018 6.1E-07 51.2 5.0 41 269-314 21-64 (240)
474 2djk_A PDI, protein disulfide- 95.3 0.019 6.5E-07 45.8 4.8 43 79-124 22-64 (133)
475 3hz8_A Thiol:disulfide interch 95.2 0.011 3.7E-07 50.6 3.3 43 79-123 23-65 (193)
476 1h75_A Glutaredoxin-like prote 95.2 0.018 6.3E-07 41.2 4.1 33 84-124 3-35 (81)
477 2cq9_A GLRX2 protein, glutared 95.1 0.042 1.4E-06 43.7 6.3 31 276-314 31-61 (130)
478 1un2_A DSBA, thiol-disulfide i 95.1 0.0037 1.3E-07 53.9 -0.1 43 269-313 112-157 (197)
479 1hyu_A AHPF, alkyl hydroperoxi 95.0 0.025 8.6E-07 56.2 5.7 42 80-124 117-158 (521)
480 2c0g_A ERP29 homolog, windbeut 94.9 0.046 1.6E-06 48.8 6.5 42 269-314 32-76 (248)
481 1r7h_A NRDH-redoxin; thioredox 94.8 0.03 1E-06 39.2 4.3 33 274-314 3-35 (75)
482 1ttz_A Conserved hypothetical 94.8 0.016 5.3E-07 42.8 2.7 23 84-107 3-25 (87)
483 1un2_A DSBA, thiol-disulfide i 94.7 0.0056 1.9E-07 52.7 0.0 43 79-123 112-157 (197)
484 1kte_A Thioltransferase; redox 94.6 0.036 1.2E-06 41.9 4.4 23 274-297 14-36 (105)
485 2ht9_A Glutaredoxin-2; thiored 94.3 0.054 1.8E-06 44.1 5.1 20 276-296 53-72 (146)
486 2hze_A Glutaredoxin-1; thiored 94.2 0.039 1.3E-06 42.6 4.0 22 273-295 20-41 (114)
487 2qc7_A ERP31, ERP28, endoplasm 94.2 0.048 1.6E-06 48.4 5.0 40 79-123 21-63 (240)
488 1r7h_A NRDH-redoxin; thioredox 94.2 0.053 1.8E-06 37.9 4.3 33 84-124 3-35 (75)
489 3gv1_A Disulfide interchange p 94.0 0.07 2.4E-06 43.5 5.2 41 263-310 7-47 (147)
490 3c1r_A Glutaredoxin-1; oxidize 93.5 0.096 3.3E-06 40.8 5.0 35 274-313 27-62 (118)
491 2c0g_A ERP29 homolog, windbeut 93.2 0.13 4.4E-06 45.8 5.9 41 79-123 32-75 (248)
492 3feu_A Putative lipoprotein; a 92.8 0.043 1.5E-06 46.5 2.2 39 270-312 22-60 (185)
493 3l9v_A Putative thiol-disulfid 92.8 0.025 8.5E-07 48.1 0.6 43 269-313 13-58 (189)
494 3feu_A Putative lipoprotein; a 92.6 0.044 1.5E-06 46.4 1.9 39 80-122 22-60 (185)
495 2klx_A Glutaredoxin; thioredox 92.6 0.2 6.7E-06 36.4 5.3 40 84-132 8-47 (89)
496 3l9v_A Putative thiol-disulfid 92.5 0.03 1E-06 47.6 0.8 43 79-123 13-58 (189)
497 3nzn_A Glutaredoxin; structura 92.3 0.12 4.3E-06 38.9 4.0 22 274-296 24-45 (103)
498 1kte_A Thioltransferase; redox 92.1 0.024 8.3E-07 42.9 -0.3 23 84-107 14-36 (105)
499 2klx_A Glutaredoxin; thioredox 92.0 0.29 1E-05 35.5 5.6 32 274-313 8-39 (89)
500 3rhb_A ATGRXC5, glutaredoxin-C 91.4 0.26 8.8E-06 37.7 5.0 22 274-296 21-42 (113)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-32 Score=240.45 Aligned_cols=156 Identities=40% Similarity=0.697 Sum_probs=136.8
Q ss_pred ccccccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 45 CTTFYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 45 ~~~~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
....+.+++|++||||+++.+.|+++++++|+||+||++||+|||++|||+|..|++.|++.+++|++.|++|++||.|+
T Consensus 17 ~~~~M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds 96 (216)
T 3sbc_A 17 RGSHMVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDS 96 (216)
T ss_dssp -----CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCcchhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCc
Confidence 34456788999999999998778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceeeeeccCCcc
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGALYSRLGGRA 204 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~ 204 (384)
.+.+++|.+..++..+.++++||+++|++++++++||++.++.| ...|++||||++|+||.. .+++...||+
T Consensus 97 ~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g-----~~~R~tFiID~~G~Ir~~---~v~~~~~grn 168 (216)
T 3sbc_A 97 EYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEG-----VALRGLFIIDPKGVIRHI---TINDLPVGRN 168 (216)
T ss_dssp HHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTT-----EECEEEEEECTTSBEEEE---EEECTTBCCC
T ss_pred hhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCC-----ceeeEEEEECCCCeEEEE---EEcCCCCCCC
Confidence 99999999887666566678999999999999999999887755 556999999999999754 5788888988
Q ss_pred ceee
Q psy17178 205 WIRH 208 (384)
Q Consensus 205 wk~~ 208 (384)
....
T Consensus 169 ~dEi 172 (216)
T 3sbc_A 169 VDEA 172 (216)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 2
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=1.2e-31 Score=227.92 Aligned_cols=135 Identities=30% Similarity=0.428 Sum_probs=114.6
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 129 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~ 129 (384)
++++|++||+|++++. +|++++|++++||++||+||+++|||+|+.|+|.|+++++++++.|+++++||.|+++.++
T Consensus 3 ~l~vG~~aPdF~l~~~---~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~ 79 (157)
T 4g2e_A 3 MVEIGELAPDFELPDT---ELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNK 79 (157)
T ss_dssp CCCTTSBCCCCEEEBT---TSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHH
T ss_pred cCCCCCCCcCeEeECC---CCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHH
Confidence 5789999999999877 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 130 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+|.+.. +++||+++|.+++++++|||.....+........|++||||++|+|++...+
T Consensus 80 ~~~~~~-------~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~ 137 (157)
T 4g2e_A 80 AFKEHN-------KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVS 137 (157)
T ss_dssp HHHHHT-------TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHc-------CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEEC
Confidence 998843 8899999999999999999976654433333556899999999999866544
No 3
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.97 E-value=2.9e-30 Score=228.33 Aligned_cols=150 Identities=41% Similarity=0.786 Sum_probs=131.6
Q ss_pred cccCCCCCCccEEEeee-cCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVV-DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~-~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
.+++|++||+|+++++. |++|++++|+||+||++||+|||++|||+|..|++.|++.+++|++.|++|++||.|+.+++
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh 104 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhH
Confidence 45799999999987643 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceeeeeccCCcccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGALYSRLGGRAWIR 207 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~wk~ 207 (384)
++|.+...+..+..+++||+++|++++++++||++.+..| ...|++||||++|+||.+ .+++...+|+...
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g-----~~~R~tFiIDp~g~Ir~~---~~~~~~~gr~~~E 175 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQG-----VAYRGLFIIDPHGMLRQI---TVNDMPVGRSVEE 175 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEE---EEECTTCCCCHHH
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCC-----eeEEEEEEECCCCeEEEE---EEecCCCCCCHHH
Confidence 9998765444455578999999999999999999877644 456899999999999754 4677888887554
No 4
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.3e-29 Score=220.33 Aligned_cols=141 Identities=45% Similarity=0.744 Sum_probs=132.5
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+++|+++|+|+++.+.|+++++++|+||+||++||+|||+.|||+|..|++.|++.+++|++.|++|++||.|++..+.
T Consensus 22 ~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~ 101 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101 (216)
T ss_dssp CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred hhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHH
Confidence 35799999999999887999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+|.+..+...+..+++||+++|++++++++||++..+.|...|++||||++|+|+++..++
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~ 162 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITIND 162 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcC
Confidence 9999987777777899999999999999999999888888899999999999999987653
No 5
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.96 E-value=8.6e-30 Score=216.41 Aligned_cols=130 Identities=29% Similarity=0.438 Sum_probs=113.2
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
++++|+++|+|+++ |.+|++++|++++||++||+||+++|||+|+.|+|.|+++++++++.++.+++||.|+++.++
T Consensus 3 ~l~vG~~aPdF~l~---~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~ 79 (157)
T 4g2e_A 3 MVEIGELAPDFELP---DTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNK 79 (157)
T ss_dssp CCCTTSBCCCCEEE---BTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHH
T ss_pred cCCCCCCCcCeEeE---CCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHH
Confidence 46799999999998 569999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCC-----ceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQG-----HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~-----~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++++ +++||+++|++++++++||+.....+ ...|++||||++|+|++++..
T Consensus 80 ~~~~~~-------~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~ 137 (157)
T 4g2e_A 80 AFKEHN-------KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVS 137 (157)
T ss_dssp HHHHHT-------TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHc-------CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEEC
Confidence 999876 89999999999999999999754332 367899999999999998764
No 6
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=4.9e-31 Score=225.72 Aligned_cols=135 Identities=25% Similarity=0.371 Sum_probs=118.2
Q ss_pred ccccCCCCCCccEEEeeecCccceEEcccc--CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~--~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
.++++|++||+|++++. +|++++|+++ +||++||+|||++|||+|+.|+|.|++++++|++.|+++++||.|+++
T Consensus 3 gml~vG~~aPdF~l~~~---~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~ 79 (164)
T 4gqc_A 3 GLVELGEKAPDFTLPNQ---DFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPW 79 (164)
T ss_dssp -CCCTTSBCCCCEEEBT---TSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHH
T ss_pred CcccCCCCCcCcEeECC---CCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHH
Confidence 35789999999999877 9999999999 899999999999999999999999999999999999999999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
.+++|.+.. +++||+++|++++++++||++..+.+. ......|++||||++|+|++...+
T Consensus 80 ~~~~~~~~~-------~~~fp~l~D~~~~v~~~ygv~~~~~~~-~~~~~~p~tflID~~G~I~~~~~~ 139 (164)
T 4gqc_A 80 CLKKFKDEN-------RLAFNLLSDYNREVIKLYNVYHEDLKG-LKMVAKRAVFIVKPDGTVAYKWVT 139 (164)
T ss_dssp HHHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEEEETT-EEEEECCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHhc-------CcccceeecCchHHHHHcCCccccccc-CcCCeeeEEEEECCCCEEEEEEEe
Confidence 999998843 889999999999999999997654221 122345789999999999865443
No 7
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.96 E-value=2.7e-28 Score=222.82 Aligned_cols=142 Identities=65% Similarity=1.140 Sum_probs=126.9
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
...+.+|+++|+|+++++.|++|++++|++++||++||+||+++|||+|+.|++.|++++++|+++|++||+||.|+.+.
T Consensus 59 ~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 59 LSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 35677999999999998778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+++|.+.++++.+.++++||+++|.+++++++||++....| ...|++||||++|+|+....+
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g-----~~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSG-----HTLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTT-----EECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCC-----CccceEEEECCCCeEEEEEec
Confidence 99999987666555578999999999999999999776533 456889999999999876443
No 8
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.95 E-value=2e-29 Score=215.75 Aligned_cols=131 Identities=24% Similarity=0.387 Sum_probs=119.1
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeecccc--CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~--~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
..++|+++|+|+++ |.+|++++|+|+ +||++||+||+++|||+|+.|+|.|++++++|++.|+.+++||.|+++.
T Consensus 4 ml~vG~~aPdF~l~---~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~ 80 (164)
T 4gqc_A 4 LVELGEKAPDFTLP---NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWC 80 (164)
T ss_dssp CCCTTSBCCCCEEE---BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHH
T ss_pred cccCCCCCcCcEeE---CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHH
Confidence 35799999999998 569999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCC----CceeeEEEEEeCCceEEEEEecC
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ----GHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~----~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+++|.+++ +++||+++|++++++++||++..+. +...|++||||++|+|++++...
T Consensus 81 ~~~~~~~~-------~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~ 140 (164)
T 4gqc_A 81 LKKFKDEN-------RLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTD 140 (164)
T ss_dssp HHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECS
T ss_pred HHHHHHhc-------CcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeC
Confidence 99999876 8999999999999999999976432 13578999999999999988643
No 9
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.95 E-value=9.8e-28 Score=212.13 Aligned_cols=139 Identities=42% Similarity=0.769 Sum_probs=128.6
Q ss_pred CCCCCCCCCceeeeE-EcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAV-VDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l-~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
..+|+++|+|+++++ .|++|+.++|+||+||++||+||++.|||+|..|+..|++++++|++.|++|++||.|+.+.++
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~ 105 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHL 105 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHH
Confidence 479999999997653 3789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|.++.+...+..+++||+++|++++++++||++....|...+++||||++|+|++++.+
T Consensus 106 ~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~ 165 (219)
T 3tue_A 106 QWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVN 165 (219)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEe
Confidence 999887666666689999999999999999999988888889999999999999998754
No 10
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.95 E-value=4.2e-28 Score=220.11 Aligned_cols=141 Identities=65% Similarity=1.108 Sum_probs=125.6
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|+++++.|++|++++|++++||++||+||+++|||+|+.++|.|++++++|+++|+++|+||.|+.+.+
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 45789999999999987788899999999999999999998899999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.++++.+.++++||+++|.+++++++||+.....| ...|++||||++|+|+....+
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g-----~~~p~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQG-----HTLRGLFIIDEKGVLRQITMN 186 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCC-----CccceEEEEcCCCeEEEEEec
Confidence 9999887655555578999999999999999999766533 456889999999999876543
No 11
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.95 E-value=1.9e-27 Score=217.30 Aligned_cols=140 Identities=68% Similarity=1.148 Sum_probs=129.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+.+|+|+++++.|.+|++++|+|++||++||+||+++|||+|+.|++.|++++++|+++|++||+||.|+++.++
T Consensus 61 ~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~ 140 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140 (254)
T ss_dssp CCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 34689999999999877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.++++.+..+++||++.|.++.++++||+.....|...|++||||++|+|++++..
T Consensus 141 ~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp HHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEec
Confidence 999988777666579999999999999999999877767788999999999999998775
No 12
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=8e-28 Score=214.22 Aligned_cols=142 Identities=64% Similarity=1.096 Sum_probs=122.8
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|+++++.|++|++++|++++||++||+|||++|||+|+.++|.|++++++|+++|+++|+||.|+++.+
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 45679999999999875566789999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+...++.+.++++||+++|.+++++++||+.....| ...|++||||++|+|+....|.
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g-----~~~p~~~lID~~G~I~~~~~g~ 158 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSG-----HTLRGLFIIDDKGILRQITLND 158 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCC-----cccceEEEECCCCEEEEEEecC
Confidence 9999876444333367899999999999999999765432 3578999999999999776553
No 13
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.95 E-value=2.4e-27 Score=215.06 Aligned_cols=140 Identities=69% Similarity=1.108 Sum_probs=128.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+++|+|+++++.|++|++++|+|++||++||+||+++|||+|+.++|.|++++++|+++|++||+||.|+++.++
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~ 126 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHL 126 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 35789999999999877888999999999999999999977999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.++++.+..+++||++.|.+++++++||+.....|...|++||||++|+|++++..
T Consensus 127 ~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 127 AWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMN 186 (240)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEec
Confidence 999988776655579999999999999999999877666688999999999999998765
No 14
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.2e-27 Score=210.29 Aligned_cols=140 Identities=68% Similarity=1.154 Sum_probs=125.2
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+.+|+|+++++.|.+|+++++++++||++||+||+++|||+|+.++|.|++++++|++++++||+||.|+++.++
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 97 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 97 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 35689999999999765678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.++++.++.+++||++.|++++++++||+.....|...|++||||++|+|++++..
T Consensus 98 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g 157 (211)
T 2pn8_A 98 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 157 (211)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEec
Confidence 999987655444468999999999999999999765555679999999999999998854
No 15
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.95 E-value=3.1e-28 Score=209.78 Aligned_cols=142 Identities=22% Similarity=0.243 Sum_probs=119.2
Q ss_pred ccccCCCCCCccEEE-eeecCccceEEccc-cCCCeEEEEEeeCCCCCCch-HHHHHHHHhHHHHHhCCcEEEE-EeCCC
Q psy17178 49 YSKNLSKPAPFWQGT-AVVDGQLKEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINTEVVA-ASVDS 124 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~-~~~~~~g~~~~l~~-~~gk~vvl~f~~~~~cp~C~-~~~~~l~~~~~~~~~~~v~vi~-Vs~d~ 124 (384)
..+++|++||+|+++ +. +|++++|++ ++||++||+|||++|||+|+ .|+|.|++++++|+++|+++|+ ||.|+
T Consensus 13 ~~~~vG~~aPdf~l~~~~---~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~ 89 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGE---PGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVND 89 (173)
T ss_dssp CCCCTTCBCCCCEEECSS---TTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred CCCCCCCCCCCeEeeeCC---CCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCC
Confidence 356799999999998 66 899999999 59999999999999999999 5999999999999999999997 99999
Q ss_pred HHhHHhhccCccccCCCCccc--eeEEeeCcchhHHhhcCcccCCCC--cccceeEEEEEEEecCCCcccccceeeeecc
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQGP--VRGSLLSTAIFVYALTSPVNGYAGGALYSRL 200 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~g~--~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~ 200 (384)
++.+++|.+.. +++ ||+++|++++++++||+..++.+. ..+....|++|||| +|+|+....+ +..
T Consensus 90 ~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~---~~~ 158 (173)
T 3mng_A 90 AFVTGEWGRAH-------KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVE---PDG 158 (173)
T ss_dssp HHHHHHHHHHT-------TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEEC---TTS
T ss_pred HHHHHHHHHHh-------CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEe---CCC
Confidence 99999999854 666 999999999999999997654210 11234568999999 9999876543 444
Q ss_pred CCcc
Q psy17178 201 GGRA 204 (384)
Q Consensus 201 ~g~~ 204 (384)
.|++
T Consensus 159 ~g~~ 162 (173)
T 3mng_A 159 TGLT 162 (173)
T ss_dssp SCSS
T ss_pred CCcc
Confidence 4554
No 16
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.95 E-value=9.3e-28 Score=204.87 Aligned_cols=137 Identities=18% Similarity=0.219 Sum_probs=116.9
Q ss_pred cccCCCCCCccEEEeeecCcc--ceEEccc-cCCCeEEEEEeeCCCCCCch-HHHHHHHHhHHHHHhCCcE-EEEEeCCC
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQL--KEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINTE-VVAASVDS 124 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g--~~~~l~~-~~gk~vvl~f~~~~~cp~C~-~~~~~l~~~~~~~~~~~v~-vi~Vs~d~ 124 (384)
.+++|+++|+|+++. .+.+| ++++|++ ++||++||+|||++|||+|+ .|+|.|++++++|+++|++ +++||.|+
T Consensus 3 ~~~~G~~aP~f~l~~-~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~ 81 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAY-FDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND 81 (162)
T ss_dssp CCCTTCBCCCCEEEE-ECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred cCCCCCCCCCeEEEe-ecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 567999999999862 14489 9999999 89999999999999999999 9999999999999999999 99999999
Q ss_pred HHhHHhhccCccccCCCCcc--ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKL--KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~--~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++.+++|.+.. ++ +||+++|.+++++++||+.........|....|++|||| +|+|++...|.
T Consensus 82 ~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 82 PFVMKAWAKSY-------PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp HHHHHHHHHTC-------TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred HHHHHHHHHhc-------CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 99999999854 66 899999999999999999754211001234568899999 99999876654
No 17
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.94 E-value=1.2e-27 Score=208.28 Aligned_cols=139 Identities=14% Similarity=0.159 Sum_probs=118.2
Q ss_pred cccccCCCCCCccEEEeeecCcc-ceEEccc-cCCCeEEEEEeeCCCCCCchH-HHHHHHHhHHHHHhCCcE-EEEEeCC
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQL-KEIKLSD-YYGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINTE-VVAASVD 123 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g-~~~~l~~-~~gk~vvl~f~~~~~cp~C~~-~~~~l~~~~~~~~~~~v~-vi~Vs~d 123 (384)
.+++++|+++|+|+++++ ..+| ++++|++ ++||++||+||+++|||+|+. |+|.|++++++|+++|++ |++||.|
T Consensus 23 ~~~l~vG~~aPdf~l~~~-~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 23 MMTIAVGDKLPNATFKEK-TADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp SSCCCTTCBCCCCEEEEE-ETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred cCcCCCCCCCCCcEeecc-cCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 356889999999999875 2367 8999999 899999999999999999999 899999999999999999 9999999
Q ss_pred CHHhHHhhccCccccCCCCccc--eeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 124 SHFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+++.+++|.++. +++ ||+++|++++++++||+...+....-|....|++|||| +|+|+....+.
T Consensus 102 ~~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 102 DLHVMGAWATHS-------GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp CHHHHHHHHHHH-------TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECS
T ss_pred CHHHHHHHHHHh-------CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeC
Confidence 999999999854 677 99999999999999999765311001334558899997 99999877664
No 18
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.94 E-value=8.9e-28 Score=208.44 Aligned_cols=136 Identities=25% Similarity=0.230 Sum_probs=118.3
Q ss_pred ccccccCCCC----CCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 47 TFYSKNLSKP----APFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 47 ~~~~~~~G~~----aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
....+++|+. +|+|++++. +|++++|++++||++||+||+++|||+|+.++|.|++++++|+++|+++++||.
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~---~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~ 93 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLS---GSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSR 93 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEG---GGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCcccCcCcccCCcCCCeeEECC---CCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 3456778888 999999887 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCC-cccceeEEEEEEEecCCCccccc
Q psy17178 123 DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGP-VRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 123 d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~-~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
|+++.+++|.+.. +++||+++|.+++++++||++..+... .......|++||||++|+|+...
T Consensus 94 D~~~~~~~~~~~~-------~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~ 157 (179)
T 3ixr_A 94 DSVKSHDSFCAKQ-------GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW 157 (179)
T ss_dssp CCHHHHHHHHHHH-------TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE
T ss_pred CCHHHHHHHHHHc-------CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE
Confidence 9999999999854 789999999999999999997654321 11112368899999999998655
No 19
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=1.8e-26 Score=206.84 Aligned_cols=142 Identities=56% Similarity=1.000 Sum_probs=124.3
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|+++++.+.+|++++|++++||++||+|||++|||+|+.+++.|++++++|+++|+++|+||.|+.+.+
T Consensus 25 ~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 25 PAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp --CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 35689999999999986667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.+.+..+.++++||+++|.+++++++||+.....| ...|++||||++|+|+....|.
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g-----~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPG-----LALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCC-----cccceEEEECCCCEEEEEEecC
Confidence 9999877555444578999999999999999999765432 4568999999999998766554
No 20
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=2.8e-27 Score=202.89 Aligned_cols=131 Identities=16% Similarity=0.160 Sum_probs=113.6
Q ss_pred cccCCCCCCccEEE-eeecCccceEEcccc-CCCeEEEEEeeCCCCCCchH-HHHHHHHhHHHHHhCCc-EEEEEeCCCH
Q psy17178 50 SKNLSKPAPFWQGT-AVVDGQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINT-EVVAASVDSH 125 (384)
Q Consensus 50 ~~~~G~~aP~f~l~-~~~~~~g~~~~l~~~-~gk~vvl~f~~~~~cp~C~~-~~~~l~~~~~~~~~~~v-~vi~Vs~d~~ 125 (384)
.+++|+++|+|+++ +. +|++++|+++ +||++||+|||++|||+|+. |+|.|++++++|+++|+ +|++||.|++
T Consensus 2 ~l~~G~~aP~f~l~~~~---~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 78 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFGAT---PNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDS 78 (167)
T ss_dssp CCCTTCBCCCCEEESSS---TTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCH
T ss_pred CCCCCCcCCCcEeecCC---CCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 46799999999998 66 8999999999 99999999999999999999 99999999999999999 9999999999
Q ss_pred HhHHhhccCccccCCCCccc--eeEEeeCcchhHHhhcCcccCCCCccc-ceeEEEEEEEecCCCccccc
Q psy17178 126 FTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQGPVRG-SLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~g~~~g-~~~~~~~~vid~~G~v~~~~ 192 (384)
+.+++|.+.. +++ ||+++|.+++++++||+...... ..| ....|++||| ++|+|+...
T Consensus 79 ~~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~~gv~~~~~~-~~g~~~~~p~t~lI-~~G~I~~~~ 139 (167)
T 2wfc_A 79 FVMDAWGKAH-------GADDKVQMLADPGGAFTKAVDMELDLSA-VLGNVRSKRYSLVI-EDGVVTKVN 139 (167)
T ss_dssp HHHHHHHHHT-------TCTTTSEEEECTTSHHHHHTTCEECCHH-HHSSCEECCEEEEE-ETTEEEEEE
T ss_pred HHHHHHHHhc-------CCCcceEEEECCCCcHHHHcCCcccccc-ccCcccceEEEEEE-eCCEEEEEE
Confidence 9999999853 677 99999999999999999654210 011 2234789999 999998764
No 21
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.94 E-value=7.8e-27 Score=209.49 Aligned_cols=144 Identities=47% Similarity=0.818 Sum_probs=124.8
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
...+.+|+++|+|+++++.|++|++++|++++||++||+||+++|||+|+.++|.|++++++|+++|+++|+||.|+.+.
T Consensus 37 ~~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 37 TMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp ---CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 35688999999999998668889999999999999999999779999999999999999999999999999999999999
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.++|.+.+++..+..+++||++.|.++++++.||+.....| ...|++||||++|+|+....|..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g-----~~~P~~~lID~~G~I~~~~~g~~ 180 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDG-----NAFRGLFIIDPNGILRQITINDK 180 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTS-----SBCEEEEEECTTSEEEEEEEECT
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCC-----CccceEEEECCCCeEEEEEecCC
Confidence 99999877555444478999999999999999999765533 34588999999999997766543
No 22
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.94 E-value=2.2e-26 Score=206.57 Aligned_cols=141 Identities=47% Similarity=0.846 Sum_probs=127.3
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+.+|+|+++++.|.+|+++++++++||++||+||+++||++|+.++|.|++++++|++++++||+||+|++++.+
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 118 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHL 118 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 45789999999999877888999999999999999999966999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+|.+.++++.+..+++|+++.|.++.+++.||+.....|...|++||||++|+|++++...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~ 179 (222)
T 3ztl_A 119 AWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITIND 179 (222)
T ss_dssp HHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEEC
T ss_pred HHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecC
Confidence 9999887665555799999999999999999997665556889999999999999988654
No 23
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.94 E-value=2.4e-26 Score=205.91 Aligned_cols=139 Identities=33% Similarity=0.630 Sum_probs=118.5
Q ss_pred cccCCCCCCccEEEeeecCcc--ceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g--~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
.+++|+++|+|++++. ..+| ++++|+++ +||++||+|||++|||+|+.++|.|++++++|+++|+++|+||.|+++
T Consensus 24 ~l~~G~~aP~F~l~~~-~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~ 102 (221)
T 2c0d_A 24 LSLVTKKAYNFTAQGL-NKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVY 102 (221)
T ss_dssp --CTTSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEecc-ccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 3689999999999764 2257 89999999 999999999999999999999999999999999999999999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.+++|.+...+..+.++++||+++|.+++++++||+. ...| ...|++||||++|+|++...|.
T Consensus 103 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g-----~~~P~~~lID~~G~I~~~~~g~ 165 (221)
T 2c0d_A 103 SHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDNS-----FALRGLFIIDKNGCVRHQTVND 165 (221)
T ss_dssp HHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETTT-----EECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccCC-----CccceEEEECCCCeEEEEEecC
Confidence 9999998754333333578999999999999999997 4422 3568999999999999776553
No 24
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.94 E-value=4.1e-26 Score=204.43 Aligned_cols=137 Identities=34% Similarity=0.618 Sum_probs=121.1
Q ss_pred CCCCCCCCCceeeeEEcCcc--eeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 241 PFVSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g--~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
+.+|+.+|+|+++++ ..+| ++++++++ +||++||+||+++|||+|+.++|.|++++++|++++++||+||.|+++.
T Consensus 25 l~~G~~aP~F~l~~~-~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 103 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGL-NKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYS 103 (221)
T ss_dssp -CTTSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCCCCCCeEEecc-ccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 468999999999843 2278 99999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++|++.++++.+.++++||++.|.+++++++||+. .+.|...|++||||++|+|++.+..
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 104 HLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDNSFALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp HHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccCCCccceEEEECCCCeEEEEEec
Confidence 999999875544444678999999999999999997 5445578999999999999998764
No 25
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=3.2e-26 Score=195.28 Aligned_cols=131 Identities=20% Similarity=0.237 Sum_probs=116.9
Q ss_pred CCCCCCCCCceeeeEEcCcc--eeeeccc-cCCCeEEEEEEeCCCCcCch-HhHHHHHHHHHHHHhCCcE-EEEEeCCCH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQL--KEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINTE-VVAASVDSH 315 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g--~~~~l~d-~~Gk~vvl~F~~a~~c~~C~-~~~~~l~~l~~~~~~~~v~-vv~Is~d~~ 315 (384)
+.+|+.+|+|+++.. |.+| +++++++ ++||++||+||+++|||+|+ .|+|.|++++++|+++|++ |++||.|++
T Consensus 4 ~~~G~~aP~f~l~~~-~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~ 82 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYF-DEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDP 82 (162)
T ss_dssp CCTTCBCCCCEEEEE-CTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCH
T ss_pred CCCCCCCCCeEEEee-cCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
Confidence 468999999998633 6799 9999999 89999999999999999999 9999999999999999999 999999999
Q ss_pred HhHHHHhcCccccCCCCCc--ceeEEecCchHHHHHhCceecC--CC---ceeeEEEEEeCCceEEEEEecC
Q psy17178 316 FTHLAWVNTPRKEGGLGKL--KIPLLSDLTHKISLDYGVYLSD--QG---HTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~gv~~~~--~~---~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+.+++|.+++ ++ +||++.|++++++++||+.... .| .+.|++|||| +|+|++++...
T Consensus 83 ~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 83 FVMKAWAKSY-------PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp HHHHHHHHTC-------TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred HHHHHHHHhc-------CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 9999999987 66 8999999999999999996432 12 2479999999 99999988654
No 26
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=2e-26 Score=198.46 Aligned_cols=134 Identities=22% Similarity=0.248 Sum_probs=117.4
Q ss_pred ccCCCCCCCCCCceeeeEEcCcceeeeccc-cCCCeEEEEEEeCCCCcCch-HhHHHHHHHHHHHHhCCcEEEE-EeCCC
Q psy17178 238 RAIPFVSKPAPFWQGTAVVDGQLKEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINTEVVA-ASVDS 314 (384)
Q Consensus 238 ~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d-~~Gk~vvl~F~~a~~c~~C~-~~~~~l~~l~~~~~~~~v~vv~-Is~d~ 314 (384)
...+.+|+.+|+|+++. +.+|++++|++ ++||++||+||+++|||+|+ .|+|.|++++++|+++|+++|+ ||.|+
T Consensus 12 ~~~~~vG~~aPdf~l~~--~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~ 89 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFE--GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVND 89 (173)
T ss_dssp -CCCCTTCBCCCCEEEC--SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred CCCCCCCCCCCCeEeee--CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCC
Confidence 34467999999999981 34999999999 59999989998899999999 5999999999999999999997 99999
Q ss_pred HHhHHHHhcCccccCCCCCcc--eeEEecCchHHHHHhCceecCC-----C--ceeeEEEEEeCCceEEEEEecCC
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQ-----G--HTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~~~~~-----~--~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
++.+++|+++. +++ ||+++|++++++++||+...+. | ...|++|||| +|+|++++....
T Consensus 90 ~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~ 157 (173)
T 3mng_A 90 AFVTGEWGRAH-------KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPD 157 (173)
T ss_dssp HHHHHHHHHHT-------TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTT
T ss_pred HHHHHHHHHHh-------CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCC
Confidence 99999999987 666 9999999999999999976532 1 3679999999 999999988653
No 27
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.94 E-value=1.5e-26 Score=200.76 Aligned_cols=131 Identities=27% Similarity=0.254 Sum_probs=117.7
Q ss_pred ccCCCCCCC----CCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 238 RAIPFVSKP----APFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 238 ~~~~~~g~~----~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
.....+|+. +|+|++++. +|+++++++++||++||+||+++|||+|+.+++.|++++++|++++++|++||.|
T Consensus 18 ~~~l~~Gd~ig~~aP~f~l~~~---~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D 94 (179)
T 3ixr_A 18 GSHMNIGDTLNHSLLNHPLMLS---GSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD 94 (179)
T ss_dssp CCSSCTTCBCCHHHHHCCEEEG---GGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC
T ss_pred CcccCcCcccCCcCCCeeEECC---CCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 344567777 999999954 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCC--C----ceeeEEEEEeCCceEEEEEe
Q psy17178 314 SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ--G----HTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~--~----~~~p~~~lId~~G~i~~~~~ 378 (384)
+++.+++|++++ +++||++.|++++++++||++..+. + ...|++||||++|+|++++.
T Consensus 95 ~~~~~~~~~~~~-------~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~ 158 (179)
T 3ixr_A 95 SVKSHDSFCAKQ-------GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR 158 (179)
T ss_dssp CHHHHHHHHHHH-------TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC
T ss_pred CHHHHHHHHHHc-------CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc
Confidence 999999999977 8999999999999999999976432 1 14799999999999999884
No 28
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.94 E-value=1.4e-26 Score=202.12 Aligned_cols=133 Identities=31% Similarity=0.524 Sum_probs=116.2
Q ss_pred cCCCCCCccEEEeeecCc-c--ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 52 NLSKPAPFWQGTAVVDGQ-L--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~-g--~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
++|+++|+|++++. + | ++++|++++||++||+||+++|||+|+.++|.|++++++|+++|+++++||.|+++.+
T Consensus 2 ~~G~~aP~f~l~~~---~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~ 78 (186)
T 1n8j_A 2 LINTKIKPFKNQAF---KNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTH 78 (186)
T ss_dssp CTTCBCCCCEEEEE---ETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCCcEeecc---cCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 58999999999887 4 6 8999999999999999998899999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.+ .+..+++||+++|.+++++++||+..... | ...|++||||++|+|+....|.
T Consensus 79 ~~~~~~~---~~~~~~~fp~l~D~~~~~~~~ygv~~~~~----g-~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 79 KAWHSSS---ETIAKIKYAMIGDPTGALTRNFDNMREDE----G-LADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp HHHHHHC---TTGGGCCSEEEECTTSHHHHHTTCEETTT----T-EECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHc---CcccCCceeEEECCchHHHHHhCCccCCC----C-ceeeEEEEECCCCeEEEEEecC
Confidence 9998753 12225789999999999999999976542 2 3578999999999999776654
No 29
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=9.5e-26 Score=202.09 Aligned_cols=140 Identities=59% Similarity=0.987 Sum_probs=126.8
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+.+|+|+++++.|.+|+++++++++||++||+||+++|||+|+.+++.|++++++|++++++||+||.|+++.++
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 105 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHL 105 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 35789999999999876778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.+.+..+..+++||++.|.++.+++.||+.....|...|++||||++|+|++++..
T Consensus 106 ~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g 165 (220)
T 1zye_A 106 AWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVN 165 (220)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEec
Confidence 999988666555578999999999999999999766556689999999999999998754
No 30
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.94 E-value=1.4e-26 Score=198.09 Aligned_cols=132 Identities=21% Similarity=0.248 Sum_probs=114.7
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+++|+++|+|++++. +|++++|++++||++||+||+++|||+|+.++|.|++++++| .|+++++||.|+++.+
T Consensus 15 ~~~~~G~~~P~f~l~~~---~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~ 89 (165)
T 1q98_A 15 HFPQVGEIVENFILVGN---DLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQ 89 (165)
T ss_dssp CCCCTTCBCCCCEEECT---TSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHH
T ss_pred ccCCCCCCCCCeEEECC---CCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHH
Confidence 35679999999999776 999999999999999999999999999999999999999999 7899999999999988
Q ss_pred HhhccCccccCCCCcc-ceeEEeeC-cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D~-~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.. ++ +||+++|. +++++++||+...+.+ ..| ...|++||||++|+|+....|
T Consensus 90 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~~-~~g-~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 90 ARFCGAE-------GIENAKTVSTFRNHALHSQLGVDIQTGP-LAG-LTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp TTCTTTT-------TCTTEEEEECTTCTHHHHHTTCEECSST-TTT-SBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCceEEeeccccchHHHHhCceecccc-cCC-ccceeEEEEcCCCEEEEEEeC
Confidence 8888753 78 79999998 8999999999754311 122 356889999999999977654
No 31
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=2e-26 Score=197.29 Aligned_cols=129 Identities=22% Similarity=0.224 Sum_probs=117.4
Q ss_pred ccCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 238 RAIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 238 ~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
+..+.+|+.+|+|+++ |.+|+++++++++||++||+||+++|||+|+.++|.|++++++ ++++|++||.|+++.
T Consensus 17 ~~~l~~G~~aP~f~l~---~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~ 90 (166)
T 3p7x_A 17 GQQINEGDFAPDFTVL---DNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFA 90 (166)
T ss_dssp SCCCCTTSBCCCCEEE---CTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHH
T ss_pred cccCCCCCCCCCeEEE---cCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHH
Confidence 3445789999999998 5699999999999999999999999999999999999999987 789999999999999
Q ss_pred HHHHhcCccccCCCCCc-ceeEEecC-chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++|++++ ++ +||++.|. ++.++++||+.....+.+.|++||||++|+|++++..
T Consensus 91 ~~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 91 QKRWCASA-------GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp HHHHHHHH-------TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEEC
T ss_pred HHHHHHHc-------CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEc
Confidence 99999977 78 89999999 8999999999776655678999999999999998754
No 32
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.94 E-value=3.8e-26 Score=201.14 Aligned_cols=142 Identities=55% Similarity=0.967 Sum_probs=123.6
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 129 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~ 129 (384)
.+.+|+++|+|++++..+++|++++|++++||++||+|||++|||+|+.+++.|++++++|+++++++++||.|+.+.++
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 83 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHL 83 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 46799999999998754445599999999999999999999999999999999999999999889999999999999999
Q ss_pred hhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 130 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+|.+.+.+..+.++++||++.|.+++++++||+...+.| ...|++||||++|+|+....|..
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~-----~~~P~~~lid~~G~i~~~~~g~~ 145 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEG-----IAYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCC-----ceeeEEEEECCCCcEEEEEeCCC
Confidence 999887555444578999999999999999999765432 35688999999999997766653
No 33
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.94 E-value=3.4e-26 Score=202.25 Aligned_cols=143 Identities=43% Similarity=0.795 Sum_probs=123.2
Q ss_pred ccccCCCCCCccEEEeee-cCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 49 YSKNLSKPAPFWQGTAVV-DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~-~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
..+.+|+++|+|++++.. +++|++++|++++||++||+|||++|||+|+.+++.|++++++|++.|+++++||.|+.+.
T Consensus 4 ~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 356799999999998763 4445899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+++|.+.+.+..+.++++||+++|.+++++++||+.....| ...|++||||++|+|+....|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g-----~~~P~~~lid~~G~i~~~~~g~~ 147 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDG-----VAYRGLFIIDPKQNLRQITVNDL 147 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTT-----EECEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCC-----ceeeEEEEECCCCEEEEEEeCCC
Confidence 99999876444444468999999999999999999765533 46789999999999987765543
No 34
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.94 E-value=4.8e-26 Score=194.76 Aligned_cols=128 Identities=20% Similarity=0.241 Sum_probs=114.7
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+.+|+.+|+|+++ |.+|+++++++++||++||+||+++|||+|+.++|.|++++++| ++++|++||.|+++.+
T Consensus 15 ~~~~~G~~~P~f~l~---~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~ 89 (165)
T 1q98_A 15 HFPQVGEIVENFILV---GNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQ 89 (165)
T ss_dssp CCCCTTCBCCCCEEE---CTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHH
T ss_pred ccCCCCCCCCCeEEE---CCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHH
Confidence 345789999999998 56999999999999999999999999999999999999999999 7899999999999888
Q ss_pred HHHhcCccccCCCCCc-ceeEEecC-chHHHHHhCceecC---CCceeeEEEEEeCCceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSD---QGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~~~~---~~~~~p~~~lId~~G~i~~~~~ 378 (384)
++|++++ ++ +|+++.|. ++.++++||+...+ .|.+.|++||||++|+|++.+.
T Consensus 90 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 90 ARFCGAE-------GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp TTCTTTT-------TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHc-------CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEe
Confidence 8888776 78 79999998 79999999997543 2345799999999999999886
No 35
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.94 E-value=4.7e-27 Score=200.21 Aligned_cols=133 Identities=23% Similarity=0.262 Sum_probs=116.1
Q ss_pred cccCCCCCCccE--EEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 50 SKNLSKPAPFWQ--GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 50 ~~~~G~~aP~f~--l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
.+++|+++|+|+ +++. +|++++|++++||++||+||+++|||+|+.++|.|++++++|+++|+++++||.|+++.
T Consensus 6 ~l~~G~~~P~f~~~l~~~---~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLS---GGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCCGGGGGCCEECS---TTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred ccccCCcCCCccccccCC---CCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 468999999999 9877 99999999999999999999779999999999999999999999999999999999999
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCC-cccceeEEEEEEEecCCCccccc
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGP-VRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~-~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
+++|.+.+ +++||+++|.+++++++||+.....+. .......|++||||++|+|+...
T Consensus 83 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 83 HDNFCAKQ-------GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp HHHHHHHH-------CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE
T ss_pred HHHHHHHh-------CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE
Confidence 99999854 789999999999999999997643211 11111268899999999998655
No 36
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=2.7e-26 Score=195.88 Aligned_cols=129 Identities=25% Similarity=0.262 Sum_probs=116.2
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+.+|+.+|+|+++ |.+|+++++++++||++||+||+++||++|+.++|.|+++++++ ++++|++||.|+++.+
T Consensus 14 ~~~~~G~~~P~f~l~---~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~ 88 (163)
T 1psq_A 14 KQLQVGDKALDFSLT---TTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQ 88 (163)
T ss_dssp CCCCTTSBCCCCEEE---CTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCCEEEE---cCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHH
Confidence 345689999999998 66999999999999999999997899999999999999999999 7899999999999999
Q ss_pred HHHhcCccccCCCCCc-ceeEEec-CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|++++ ++ +||++.| .++.++++||+...+.|...|++||||++|+|++.+..
T Consensus 89 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g 144 (163)
T 1psq_A 89 KRWCGAE-------GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYV 144 (163)
T ss_dssp HHHHHHH-------TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEEC
T ss_pred HHHHHhc-------CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEec
Confidence 9999876 78 9999999 88999999999654434457999999999999998864
No 37
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.94 E-value=3.4e-26 Score=194.93 Aligned_cols=129 Identities=24% Similarity=0.299 Sum_probs=116.5
Q ss_pred CCCCCCCCCce--eeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 241 PFVSKPAPFWQ--GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 241 ~~~g~~~P~f~--l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+|+.+|+|+ ++ |.+|+++++++++||++||+||+++|||+|+.+++.|++++++|+++|++|++||.|+++.+
T Consensus 7 l~~G~~~P~f~~~l~---~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~ 83 (163)
T 3gkn_A 7 AVLELPAATFDLPLS---LSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSH 83 (163)
T ss_dssp CCCCCCGGGGGCCEE---CSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred cccCCcCCCcccccc---CCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 46899999999 98 56999999999999999999996699999999999999999999999999999999999999
Q ss_pred HHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCC--C----ceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ--G----HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~--~----~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|++++ +++|+++.|.+++++++||+..... + .+.|++||||++|+|++.+..
T Consensus 84 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~ 143 (163)
T 3gkn_A 84 DNFCAKQ-------GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRK 143 (163)
T ss_dssp HHHHHHH-------CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECS
T ss_pred HHHHHHh-------CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcC
Confidence 9999977 8999999999999999999965321 1 128999999999999998843
No 38
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.94 E-value=5.9e-27 Score=211.14 Aligned_cols=148 Identities=22% Similarity=0.337 Sum_probs=120.7
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCC-eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk-~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
++.+|+++|+|++++. +| +++|++++|| ++||+|||++|||+|+.|++.|++++++|+++|+++|+||+|+.+.+
T Consensus 2 ~l~iG~~aPdF~l~~~---~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~ 77 (233)
T 2v2g_A 2 GITLGEVFPNFEADST---IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADH 77 (233)
T ss_dssp CCCTTCBCCCCEEEET---TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCcEEecC---CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHH
Confidence 4679999999999887 88 9999999998 99999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCC-ccceeEEeeCcchhHHhhcCcccCCCCccc-ceeEEEEEEEecCCCcccccceeeeeccCCcc
Q psy17178 129 LAWVNTPRKEGGLG-KLKIPLLSDLTHKISLDYGVYLSDQGPVRG-SLLSTAIFVYALTSPVNGYAGGALYSRLGGRA 204 (384)
Q Consensus 129 ~~~~~~~~~~~~~~-~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g-~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~ 204 (384)
++|.+.+.+..+.+ +++||+++|.+++++++||+.........| ....|++||||++|+|+....+ +...+++
T Consensus 78 ~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~---~~~~gr~ 152 (233)
T 2v2g_A 78 KEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILY---PATTGRN 152 (233)
T ss_dssp HHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEE---CTTBCCC
T ss_pred HHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEec---CCCCCCC
Confidence 99998543321111 578999999999999999997543100112 2456899999999999865443 4445554
No 39
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.93 E-value=1.5e-26 Score=196.94 Aligned_cols=129 Identities=29% Similarity=0.354 Sum_probs=115.5
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCe-EEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~-vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
++++|+++|+|++++. +|++++|++++||+ +||+||+++|||+|+.++|.|++++++|+++|+++++|+.|+++..
T Consensus 1 ml~~G~~~P~f~l~~~---~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~ 77 (161)
T 3drn_A 1 MVKVGDKAPLFEGIAD---NGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSH 77 (161)
T ss_dssp -CCTTSBCCCCEEEET---TSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHH
T ss_pred CCCCCCcCCCeEeecC---CCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHH
Confidence 3679999999999887 99999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.. +++||++.|.++++++.||+... ....|++||||++|+|+....|.
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~-------~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 78 KRFKEKY-------KLPFILVSDPDKKIRELYGAKGF-------ILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp HHHHHHT-------TCCSEEEECTTSHHHHHTTCCCS-------SSCCCEEEEECTTSBEEEEEECS
T ss_pred HHHHHHh-------CCCceEEECCcHHHHHHcCCCCc-------CcccceEEEECCCCEEEEEEecC
Confidence 9999854 78999999999999999999421 13357889999999998776664
No 40
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.93 E-value=4.5e-26 Score=195.33 Aligned_cols=130 Identities=14% Similarity=0.103 Sum_probs=115.9
Q ss_pred CCCCCCCCCceee-eEEcCcceeeecccc-CCCeEEEEEEeCCCCcCchH-hHHHHHHHHHHHHhCCc-EEEEEeCCCHH
Q psy17178 241 PFVSKPAPFWQGT-AVVDGQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINT-EVVAASVDSHF 316 (384)
Q Consensus 241 ~~~g~~~P~f~l~-~l~d~~g~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~-~~~~l~~l~~~~~~~~v-~vv~Is~d~~~ 316 (384)
+.+|+.+|+|+++ +. +|++++|+++ +||++||+||+++|||+|+. |+|.|++++++|+++|+ +|++||.|+++
T Consensus 3 l~~G~~aP~f~l~~~~---~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~ 79 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGAT---PNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSF 79 (167)
T ss_dssp CCTTCBCCCCEEESSS---TTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred CCCCCcCCCcEeecCC---CCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 4689999999998 55 9999999999 99999999999999999999 99999999999999999 99999999999
Q ss_pred hHHHHhcCccccCCCCCcc--eeEEecCchHHHHHhCceecCC-----CceeeEEEEEeCCceEEEEEecCC
Q psy17178 317 THLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQ-----GHTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~~~~~-----~~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
.+++|+++. +++ ||++.|++++++++||+..... ....|++||| ++|+|++++...+
T Consensus 80 ~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 80 VMDAWGKAH-------GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp HHHHHHHHT-------TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTT
T ss_pred HHHHHHHhc-------CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEecCC
Confidence 999999876 677 9999999999999999965411 1245999999 9999999887654
No 41
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.93 E-value=9.1e-27 Score=198.81 Aligned_cols=130 Identities=26% Similarity=0.349 Sum_probs=115.1
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+++|+++|+|++++. +|++++|++++||++||+||+++|||+|+.++|.|++++++| .++++++||.|+++.+
T Consensus 14 ~~~~~G~~~P~f~l~~~---~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~ 88 (163)
T 1psq_A 14 KQLQVGDKALDFSLTTT---DLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQ 88 (163)
T ss_dssp CCCCTTSBCCCCEEECT---TSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCCEEEEcC---CCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHH
Confidence 35679999999999776 999999999999999999998899999999999999999999 7899999999999999
Q ss_pred HhhccCccccCCCCcc-ceeEEee-CcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D-~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.. ++ +||+++| .+++++++||+...+.| ...|++||||++|+|+....|.
T Consensus 89 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g-----~~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 89 KRWCGAE-------GLDNAIMLSDYFDHSFGRDYALLINEWH-----LLARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp HHHHHHH-------TCTTSEEEECTTTCHHHHHHTCBCTTTC-----SBCCEEEEECTTCBEEEEEECS
T ss_pred HHHHHhc-------CCCCcEEecCCchhHHHHHhCCccccCC-----ceEEEEEEEcCCCeEEEEEecC
Confidence 9998854 78 8999999 88999999999654422 2357899999999999776654
No 42
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.93 E-value=7.1e-26 Score=197.65 Aligned_cols=134 Identities=28% Similarity=0.456 Sum_probs=117.5
Q ss_pred CCCCCCCCceeeeEEcCcc--eeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 242 FVSKPAPFWQGTAVVDGQL--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g--~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+|+.+|+|+++++ + +| +++++++++||++||+||+++|||+|+.++|.|++++++|++++++|++||.|+++.++
T Consensus 2 ~~G~~aP~f~l~~~-~-~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 79 (186)
T 1n8j_A 2 LINTKIKPFKNQAF-K-NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHK 79 (186)
T ss_dssp CTTCBCCCCEEEEE-E-TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeecc-c-CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 47899999999965 1 37 89999999999999999977999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+|++++. +..+++||++.|.++.++++||+.....|.+.|++||||++|+|++++...
T Consensus 80 ~~~~~~~---~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 80 AWHSSSE---TIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp HHHHHCT---TGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHcC---cccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 9988652 122578999999999999999997654455689999999999999988643
No 43
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=7.1e-26 Score=199.89 Aligned_cols=129 Identities=24% Similarity=0.289 Sum_probs=116.5
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+.+|+.+|+|+++ |.+|++++|++++||++||+||+++||++|+.+++.|++++++| ++++|++||.|+++.+
T Consensus 50 ~~l~~G~~aPdf~l~---d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~ 124 (200)
T 3zrd_A 50 KLPQIGDKAKDFTLV---AKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQ 124 (200)
T ss_dssp CCCCTTCBCCCCEEE---CTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHH
T ss_pred ccCCCCCCCCCeEEE---CCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHH
Confidence 345789999999998 56999999999999999999999999999999999999999999 7899999999999988
Q ss_pred HHHhcCccccCCCCCc-ceeEEecC-chHHHHHhCceecC---CCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSD---QGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~~~~---~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|++++ ++ +|+++.|. ++.++++||+.... .|.+.|++||||++|+|++++..
T Consensus 125 ~~~~~~~-------~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 125 SRFCGAE-------GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp TTCTTTT-------TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 8888876 88 99999999 89999999997544 24468999999999999998764
No 44
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.93 E-value=1.2e-26 Score=198.57 Aligned_cols=129 Identities=26% Similarity=0.278 Sum_probs=114.1
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
...+++|+++|+|++++. +|++++|++++||++||+||+++|||+|+.++|.|++++++ .|+++++||.|+++.
T Consensus 17 ~~~l~~G~~aP~f~l~~~---~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~ 90 (166)
T 3p7x_A 17 GQQINEGDFAPDFTVLDN---DLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFA 90 (166)
T ss_dssp SCCCCTTSBCCCCEEECT---TSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHH
T ss_pred cccCCCCCCCCCeEEEcC---CCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHH
Confidence 346779999999999877 99999999999999999999999999999999999999887 789999999999999
Q ss_pred HHhhccCccccCCCCcc-ceeEEeeC-cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 128 HLAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~-~~p~l~D~-~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+++|.+.+ ++ +||+++|. +++++++||+.....| ...|++||||++|+|+....+
T Consensus 91 ~~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g-----~~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 91 QKRWCASA-------GLDNVITLSDHRDLSFGENYGVVMEELR-----LLARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp HHHHHHHH-------TCSSCEEEECTTTCHHHHHHTCEETTTT-----EECCEEEEECTTCBEEEEEEC
T ss_pred HHHHHHHc-------CCCceEEccCCchhHHHHHhCCccccCC-----ceeeEEEEECCCCeEEEEEEc
Confidence 99999854 78 89999999 8999999999765422 346889999999999876443
No 45
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=3e-26 Score=202.29 Aligned_cols=132 Identities=24% Similarity=0.257 Sum_probs=115.3
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+++|+++|+|++++. +|++++|++++||++||+||+++|||+|+.++|.|++++++| +|+++++||.|+++.+
T Consensus 50 ~~l~~G~~aPdf~l~d~---~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~ 124 (200)
T 3zrd_A 50 KLPQIGDKAKDFTLVAK---DLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQ 124 (200)
T ss_dssp CCCCTTCBCCCCEEECT---TSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHH
T ss_pred ccCCCCCCCCCeEEECC---CCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHH
Confidence 45789999999999876 999999999999999999999999999999999999999999 6899999999999999
Q ss_pred HhhccCccccCCCCcc-ceeEEeeC-cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D~-~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.. ++ +||+++|. +++++++||+.....+ ..|. ..|++||||++|+|+....+
T Consensus 125 ~~~~~~~-------~~~~f~~l~D~~~~~~~~~ygv~~~~~~-~~g~-~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 125 SRFCGAE-------GLSNVITLSTLRGADFKQAYGVAITEGP-LAGL-TARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp TTCTTTT-------TCTTEEEEETTSCTHHHHHTTCEECSST-TTTS-BCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCCceEEecCchHHHHHHhCceeeccc-CCCc-cccEEEEECCCCeEEEEEec
Confidence 9998754 78 99999999 9999999999754411 1232 56889999999999865443
No 46
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.93 E-value=6.7e-26 Score=192.96 Aligned_cols=127 Identities=29% Similarity=0.321 Sum_probs=116.4
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCe-EEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~-vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
..+|+.+|+|++++ .+|+++++++++||+ +||+||+++|||+|+.++|.|++++++|+++|++|++|+.|+++.++
T Consensus 2 l~~G~~~P~f~l~~---~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 78 (161)
T 3drn_A 2 VKVGDKAPLFEGIA---DNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHK 78 (161)
T ss_dssp CCTTSBCCCCEEEE---TTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHH
T ss_pred CCCCCcCCCeEeec---CCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence 46899999999994 599999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++++ +++|+++.|.++.+++.||+... ..+.|++||||++|+|++.+..
T Consensus 79 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~--~~~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 79 RFKEKY-------KLPFILVSDPDKKIRELYGAKGF--ILPARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp HHHHHT-------TCCSEEEECTTSHHHHHTTCCCS--SSCCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHh-------CCCceEEECCcHHHHHHcCCCCc--CcccceEEEECCCCEEEEEEec
Confidence 999987 88999999999999999999421 2348999999999999998875
No 47
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.93 E-value=2.7e-26 Score=196.47 Aligned_cols=138 Identities=18% Similarity=0.170 Sum_probs=117.5
Q ss_pred ccccCCCCCCccEEEeeec-------CccceEEcccc-CCCeEEEEEeeCCCCCCchH-HHHHHHHhHHHHHhCCc-EEE
Q psy17178 49 YSKNLSKPAPFWQGTAVVD-------GQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINT-EVV 118 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~-------~~g~~~~l~~~-~gk~vvl~f~~~~~cp~C~~-~~~~l~~~~~~~~~~~v-~vi 118 (384)
-++++|+++|++++....+ +..++++|+++ +||++||+|||++|||+|.. |++.|++.+++|+++|+ +|+
T Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 8 HMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4678999999999988754 34478999998 99999999999999999999 99999999999999999 999
Q ss_pred EEeCCCHHhHHhhccCccccCCCCccc--eeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 119 AASVDSHFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 119 ~Vs~d~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+||+|+++.+++|.+.. +++ ||+++|++++++++||+..+.....-|....|++||| ++|+|+....+
T Consensus 88 gIS~D~~~~~~~f~~~~-------~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~ 157 (176)
T 4f82_A 88 CVSVNDAFVMGAWGRDL-------HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVE 157 (176)
T ss_dssp EEESSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEEC
T ss_pred EEeCCCHHHHHHHHHHh-------CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEc
Confidence 99999999999999853 666 9999999999999999976531100133345899999 99999876654
No 48
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.93 E-value=1.1e-25 Score=200.62 Aligned_cols=140 Identities=41% Similarity=0.755 Sum_probs=120.6
Q ss_pred ccccCCCCCCccEEEeeecCcc--ceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSH 125 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g--~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~ 125 (384)
..+.+|+++|+|++++. ..+| ++++|+++ +||++||+|||++|||+|+.+++.|++++++|++.|+++|+||.|++
T Consensus 19 ~~l~~G~~aP~f~l~~~-~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~ 97 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAV-FGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK 97 (213)
T ss_dssp -CCCBTSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred ccccCCCcCCCeEeecc-ccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 45679999999999775 1247 89999999 99999999999999999999999999999999999999999999999
Q ss_pred HhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 126 FTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+.+++|.+...+..+..+++||+++|.+++++++||+.. +.| ...|.+||||++|+|++...|.
T Consensus 98 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g-----~~~p~~~lID~~G~i~~~~~~~ 161 (213)
T 2i81_A 98 YTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DDS-----VSLRAFVLIDMNGIVQHLLVNN 161 (213)
T ss_dssp HHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTT-----EECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-ccC-----CcccEEEEECCCCEEEEEEecC
Confidence 999999987654444446899999999999999999965 322 4578999999999998775443
No 49
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.93 E-value=3.3e-25 Score=195.12 Aligned_cols=139 Identities=56% Similarity=0.926 Sum_probs=124.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLA 320 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~ 320 (384)
+.+|+.+|+|+++++.|.+|+++++++++||++||+||+++||++|+.+++.|++++++|++++++|++||.|+++..++
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~ 84 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLA 84 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 46899999999986533334999999999999999999999999999999999999999998899999999999999999
Q ss_pred HhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 321 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
|++.+.+..+..+++||++.|.+++++++||+...+.+...|++||||++|+|++++..
T Consensus 85 ~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g 143 (197)
T 1qmv_A 85 WINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVN 143 (197)
T ss_dssp HHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeC
Confidence 99988666555578999999999999999999766655689999999999999998764
No 50
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.93 E-value=2.3e-25 Score=198.62 Aligned_cols=138 Identities=43% Similarity=0.793 Sum_probs=123.1
Q ss_pred CCCCCCCCCCceeeeEEcCcc--eeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 316 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g--~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~ 316 (384)
.+.+|+.+|+|+++++ ..+| ++++++++ +||++||+||+++|||+|+.+++.|++++++|++++++||+||.|+++
T Consensus 20 ~l~~G~~aP~f~l~~~-~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAV-FGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp CCCBTSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred cccCCCcCCCeEeecc-ccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 4578999999999844 2268 89999999 999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.+++|++.+++..+..+++||++.|.+++++++||+.. +.|...|++||||++|+|++++..
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g~~~p~~~lID~~G~i~~~~~~ 160 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DDSVSLRAFVLIDMNGIVQHLLVN 160 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-ccCCcccEEEEECCCCEEEEEEec
Confidence 99999998866655557899999999999999999965 344589999999999999998754
No 51
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.93 E-value=3.3e-25 Score=195.87 Aligned_cols=139 Identities=43% Similarity=0.757 Sum_probs=123.4
Q ss_pred CCCCCCCCCceeeeEE-cCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVV-DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~-d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
+.+|+.+|+|++++.. |.+|+++++++++||++||+||+++||++|+.+++.|++++++|++++++|++||.|+++.++
T Consensus 6 ~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~ 85 (202)
T 1uul_A 6 AEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHL 85 (202)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred ccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 4689999999999652 223389999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.+++..+..+++||++.|.++++++.||+...+.|...|++||||++|+|++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g 145 (202)
T 1uul_A 86 AWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVN 145 (202)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeC
Confidence 999987665555578999999999999999999766555689999999999999998754
No 52
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.93 E-value=1.2e-25 Score=195.56 Aligned_cols=133 Identities=16% Similarity=0.134 Sum_probs=117.1
Q ss_pred cCCCCCCCCCCceeeeEEcCcc-eeeeccc-cCCCeEEEEEEeCCCCcCchH-hHHHHHHHHHHHHhCCcE-EEEEeCCC
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQL-KEIKLSD-YYGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINTE-VVAASVDS 314 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g-~~~~l~d-~~Gk~vvl~F~~a~~c~~C~~-~~~~l~~l~~~~~~~~v~-vv~Is~d~ 314 (384)
..+.+|+.+|+|+++++ +.+| ++++|++ ++||++||+||+++|||+|+. |+|.|++++++|+++|++ |++||.|+
T Consensus 24 ~~l~vG~~aPdf~l~~~-~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 102 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEK-TADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVND 102 (184)
T ss_dssp SCCCTTCBCCCCEEEEE-ETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred CcCCCCCCCCCcEeecc-cCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34579999999999955 3478 9999999 899988888888999999999 899999999999999999 99999999
Q ss_pred HHhHHHHhcCccccCCCCCcc--eeEEecCchHHHHHhCceecCC--C---ceeeEEEEEeCCceEEEEEecC
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSDQ--G---HTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~~~~~--~---~~~p~~~lId~~G~i~~~~~~~ 380 (384)
++.+++|++++ +++ ||+++|++++++++||+...+. | ...|++|||| +|+|++++...
T Consensus 103 ~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 103 LHVMGAWATHS-------GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp HHHHHHHHHHH-------TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECS
T ss_pred HHHHHHHHHHh-------CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeC
Confidence 99999999987 777 9999999999999999975431 2 2468899997 99999999864
No 53
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=3.8e-26 Score=205.02 Aligned_cols=148 Identities=24% Similarity=0.376 Sum_probs=120.7
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCC-eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk-~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
.+.+|+++|+|++.+. +| +++|++++|| ++||+||+++|||+|+.|++.|++++++|+++|+++|+||.|+.+.+
T Consensus 4 ~l~~G~~aP~F~l~~~---~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~ 79 (224)
T 1prx_A 4 GLLLGDVAPNFEANTT---VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDH 79 (224)
T ss_dssp -CCTTCBCCCCEEEET---TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCcCCCCCcEEecC---CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 4679999999999887 88 9999999997 88888888999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCC---CccceeEEeeCcchhHHhhcCcccCCCCccc-ceeEEEEEEEecCCCcccccceeeeeccCCcc
Q psy17178 129 LAWVNTPRKEGGL---GKLKIPLLSDLTHKISLDYGVYLSDQGPVRG-SLLSTAIFVYALTSPVNGYAGGALYSRLGGRA 204 (384)
Q Consensus 129 ~~~~~~~~~~~~~---~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g-~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~ 204 (384)
++|.+.+++..+. .+++||+++|.+++++++||+.........| ....|++||||++|+|+....+ +...+++
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~---~~~~gr~ 156 (224)
T 1prx_A 80 LAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILY---PATTGRN 156 (224)
T ss_dssp HHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEEC---CTTBCCC
T ss_pred HHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEec---CCCCCCC
Confidence 9999865443221 2789999999999999999997653211122 2346889999999999866543 4444554
No 54
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.93 E-value=4.2e-26 Score=194.97 Aligned_cols=134 Identities=15% Similarity=0.170 Sum_probs=113.5
Q ss_pred ccccCCCCCCccEEEeeecCccceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcE-EEEEeCCCHH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTE-VVAASVDSHF 126 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~-vi~Vs~d~~~ 126 (384)
..+++|+++|+|++++ ++.+++++|+++ +||++||+|||+.|||+|..|++.|++.+++|++.|++ |++||+|+++
T Consensus 12 ~~~~vGd~aPdf~l~~--~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~ 89 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYE--DVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPF 89 (171)
T ss_dssp CCCCTTCBCCCCEEEC--SSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred CcccCcCCCCCeEEec--CCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 3578999999999972 111389999995 99999999999999999999999999999999999996 9999999999
Q ss_pred hHHhhccCccccCCCCcc--ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 127 THLAWVNTPRKEGGLGKL--KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~--~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
.+++|.+.. ++ +||+++|++++++++||+..+..+...|....|++|||| +|+|+...
T Consensus 90 ~~~~w~~~~-------~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 90 VMAAWGKTV-------DPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp HHHHHHHHH-------CTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred HHHHHHHhc-------CCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 999999854 45 899999999999999999865411001334668899999 99998654
No 55
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.93 E-value=5.5e-25 Score=192.83 Aligned_cols=135 Identities=40% Similarity=0.737 Sum_probs=120.8
Q ss_pred CCCCCCCceeeeEEcCcc--eeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 243 VSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g--~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
+|+.+|+|++++. ..+| ++++++++ +||++||+||+++||++|+.++|.|++++++|++++++|++||.|+++.++
T Consensus 2 ~G~~aP~f~l~~~-~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 2 FQGQAPSFKAEAV-FGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CSSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCcCCCcEeEee-ecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 6899999999843 2278 99999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|.+.+.++.+..+++|+++.|.++.+++.||+.. +.|...|++||||++|+|++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g~~~P~~~liD~~G~i~~~~~g 139 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NESVALRAFVLIDKQGVVQHLLVN 139 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECCEEEEECTTSBEEEEEEG
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-cCCceeeEEEEEcCCCEEEEEEeC
Confidence 99998866555557899999999999999999965 334578999999999999998764
No 56
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=8.8e-26 Score=200.68 Aligned_cols=126 Identities=19% Similarity=0.143 Sum_probs=109.7
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCch-----HHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCP-----TEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~-----~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
..+++|++||+|+|++. +|++++|++++||++||+|||++|||+|. .|++.|++. | .|++||+||.|
T Consensus 20 ~~l~vG~~APdFtL~d~---~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D 91 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDD---QKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD 91 (224)
T ss_dssp CCCCTTCBCCCCEEEET---TSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS
T ss_pred CcCCCCCCCCCeEEECC---CCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC
Confidence 35679999999999876 89999999999999999999999999999 999999988 4 78999999999
Q ss_pred CHHhHHhhccCccccCCCCcc-ceeEEeeC-cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccc
Q psy17178 124 SHFTHLAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGY 191 (384)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~-~~p~l~D~-~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~ 191 (384)
+++.+++|.+.. ++ +||+++|. +++++++||++.... ...| ...|++||||++|+|++.
T Consensus 92 s~~~~~~f~~~~-------gl~~fplLsD~~~~~vak~yGv~~~~~-~~~G-~~~p~tfvID~dG~I~~~ 152 (224)
T 3keb_A 92 SPSSLARARHEH-------GLPNIALLSTLRGRDFHKRYGVLITEY-PLSG-YTSPAIILADAANVVHYS 152 (224)
T ss_dssp CHHHHHHHHHHH-------CCTTCEEEESTTCTTHHHHTTCBCCST-TSTT-CBCCEEEEECTTCBEEEE
T ss_pred CHHHHHHHHHHc-------CCCCceEEEcCCchHHHHHhCCccccc-cccC-CccCEEEEEcCCCEEEEE
Confidence 999999999854 67 69999998 699999999976531 1123 457899999999999854
No 57
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=6.1e-26 Score=203.18 Aligned_cols=150 Identities=21% Similarity=0.371 Sum_probs=119.4
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCC-eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk-~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
++.+|+++|+|++++. +.+| +++|++++|| ++||+||+++|||+|+.|++.|++++++|+++|+++|+||+|+.+.+
T Consensus 2 ~l~iG~~aP~F~l~~~-~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~ 79 (220)
T 1xcc_A 2 GYHLGATFPNFTAKAS-GIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESH 79 (220)
T ss_dssp CCCTTCBCCCCEECBT-TCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCcEeecc-cCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHH
Confidence 4679999999999653 2256 8999999998 88888888999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCccc-ceeEEEEEEEecCCCcccccceeeeeccCCcc
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRG-SLLSTAIFVYALTSPVNGYAGGALYSRLGGRA 204 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g-~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~ 204 (384)
++|.+.+++.....+++||+++|.+++++++||+.........| ....|++||||++|+|+....+ +...+++
T Consensus 80 ~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~---~~~~g~~ 153 (220)
T 1xcc_A 80 DKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLY---PATTGRN 153 (220)
T ss_dssp HHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEE---CTTBCCC
T ss_pred HHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEec---CCCCCCC
Confidence 99988543210112789999999999999999997543110123 2346899999999999866543 4444554
No 58
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.92 E-value=2.6e-25 Score=191.22 Aligned_cols=128 Identities=20% Similarity=0.178 Sum_probs=114.9
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+.+|+.+|+|+++ |.+|+++++++++||++||+||+++|||+|+.+++.|+++++++ ++++|++||.|+++.+
T Consensus 19 ~~l~~g~~~P~f~l~---~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~ 93 (171)
T 2yzh_A 19 PELKVGDRAPEAVVV---TKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQ 93 (171)
T ss_dssp CCCCTTSBCCCEEEE---ETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHH
T ss_pred CcCCCCCcCCceEEE---CCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHH
Confidence 345789999999998 55999999999999999999999999999999999999999999 7899999999999999
Q ss_pred HHHhcCccccCCCCCc-ceeEEec-CchHHHHHhCceecC---CCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSD---QGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~~~~---~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|.+++ ++ +|+++.| +++++ ++||+...+ .|.+.|++||||++|+|++++..
T Consensus 94 ~~~~~~~-------~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 151 (171)
T 2yzh_A 94 KRFCESF-------NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLV 151 (171)
T ss_dssp HHHHHHT-------TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeC
Confidence 9999876 78 8999999 88999 999997543 23468999999999999998863
No 59
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.92 E-value=4.6e-25 Score=193.35 Aligned_cols=137 Identities=39% Similarity=0.716 Sum_probs=118.3
Q ss_pred cCCCCCCccEEEeeecCcc--ceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 52 NLSKPAPFWQGTAVVDGQL--KEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g--~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
++|+++|+|++++. .++| ++++|+++ +||++||+|||++|||+|+.++|.|++++++|+++|+++++||.|+++.+
T Consensus 1 ~~G~~aP~f~l~~~-~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~ 79 (192)
T 2h01_A 1 AFQGQAPSFKAEAV-FGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTH 79 (192)
T ss_dssp CCSSBCCCCEEEEE-CTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCCcEeEee-ecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHH
Confidence 47999999999764 2257 89999999 99999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.+.+..+.++++||++.|.+++++++||+.. +.| ...|++||||++|+|+....|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g-----~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 80 LAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NES-----VALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTT-----EECCEEEEECTTSBEEEEEEGG
T ss_pred HHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-cCC-----ceeeEEEEEcCCCEEEEEEeCC
Confidence 999987654444446899999999999999999965 322 3467899999999998765553
No 60
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.92 E-value=1.1e-25 Score=193.58 Aligned_cols=131 Identities=21% Similarity=0.251 Sum_probs=114.0
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|++++. +|++++|++++||++||+||+++|||+|+.+++.|++++++| .++++++||.|+++.+
T Consensus 19 ~~l~~g~~~P~f~l~~~---~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~ 93 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTK---DLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQ 93 (171)
T ss_dssp CCCCTTSBCCCEEEEET---TSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHH
T ss_pred CcCCCCCcCCceEEECC---CCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHH
Confidence 35679999999999877 999999999999999999999999999999999999999999 7899999999999999
Q ss_pred HhhccCccccCCCCcc-ceeEEee-CcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D-~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.+ ++ +||+++| .++++ ++||+...+.+ ..| ...|++||||++|+|+....|
T Consensus 94 ~~~~~~~-------~~~~~~~l~D~~~~~~-~~~gv~~~~~~-~~g-~~~p~~~liD~~G~i~~~~~~ 151 (171)
T 2yzh_A 94 KRFCESF-------NIQNVTVASDFRYRDM-EKYGVLIGEGA-LKG-ILARAVFIIDKEGKVAYVQLV 151 (171)
T ss_dssp HHHHHHT-------TCCSSEEEECTTTCGG-GGGTCBBCSST-TTT-SBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCCeEEeecCccCcH-HHhCCEecccc-cCC-ceeeEEEEEcCCCeEEEEEeC
Confidence 9998853 77 8999999 88999 99999765421 112 346889999999999977655
No 61
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.92 E-value=7.4e-25 Score=191.16 Aligned_cols=135 Identities=27% Similarity=0.493 Sum_probs=118.0
Q ss_pred ccCCCCCCccEEEeeecCccc----eEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLK----EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~----~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
+++|+++|+|++.+. +|+ +++|++++||++||+|||++|||+|+.++|.|++++++|+++++++++||.|+++
T Consensus 1 ~~~G~~~P~f~l~~~---~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~ 77 (187)
T 1we0_A 1 SLIGTEVQPFRAQAF---QSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHF 77 (187)
T ss_dssp CCTTCBCCCCEEEEE---CSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCcCCCeEEecc---CCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHH
Confidence 368999999999988 788 9999999999999999999999999999999999999999889999999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+++|.+.+... .+++||++.|.++++++.||+.....| ...|++||||++|+|+....|..
T Consensus 78 ~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~v~~~~~g-----~~~P~~~lid~~G~i~~~~~g~~ 139 (187)
T 1we0_A 78 VHKAWHENSPAV---GSIEYIMIGDPSQTISRQFDVLNEETG-----LADRGTFIIDPDGVIQAIEINAD 139 (187)
T ss_dssp HHHHHHHSCHHH---HTCCSEEEECTTCHHHHHTTCEETTTT-----EECEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHHhccc---cCCCceEEECCchHHHHHhCCCcCCCC-----ceeeEEEEECCCCeEEEEEecCC
Confidence 999998864111 147899999999999999999755422 35689999999999998776654
No 62
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=2.2e-25 Score=202.26 Aligned_cols=143 Identities=25% Similarity=0.443 Sum_probs=121.6
Q ss_pred cccCCCCCCccEEEeeecCccceEEc-ccc--CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKL-SDY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l-~~~--~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
++.+|+++|+|++++. +| +++| +++ +||++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+
T Consensus 4 ~~~iG~~aPdF~l~~~---~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTD---HG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp ECCTTSBCCCEEEEET---TE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEEcC---CC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 5679999999999887 77 7999 999 999988888889999999999999999999999999999999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceeeeeccCCcc
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGALYSRLGGRA 204 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~ 204 (384)
.+.+|.+.+.+..+. +++||+++|.++++++.||+..... |....|++||||++|+|+....| +...|++
T Consensus 80 ~~~~w~~~~~~~~~~-~i~fPil~D~~~~ia~~ygv~~~~~----g~~~~p~~fIID~dG~I~~~~~~---~~~~gr~ 149 (249)
T 3a2v_A 80 SHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES----ATHTVRGVFIVDARGVIRTMLYY---PMELGRL 149 (249)
T ss_dssp HHHHHHHHHHHHTCC-CCCSCEEECTTSHHHHHHTCCCTTC----SSSCCEEEEEECTTSBEEEEEEE---CTTBCCC
T ss_pred HHHHHHHHHHHhcCC-CCceeEEECCchHHHHHhCCccccC----CCcccceEEEECCCCeEEEEEec---CCcccch
Confidence 999998866543222 7899999999999999999976553 33467899999999999866544 4445554
No 63
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=3e-25 Score=201.62 Aligned_cols=137 Identities=18% Similarity=0.218 Sum_probs=114.7
Q ss_pred cccCCCCCCccEEEeeecCccc--eEEccc-cCCCeEEEEEeeCCCCCCch-HHHHHHHHhHHHHHhCCc-EEEEEeCCC
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLK--EIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINT-EVVAASVDS 124 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~--~~~l~~-~~gk~vvl~f~~~~~cp~C~-~~~~~l~~~~~~~~~~~v-~vi~Vs~d~ 124 (384)
++++|+++|+|++++.. +|+ +++|++ ++||++||+|||++|||+|+ .|+|.|++++++|+++|+ ++++||.|+
T Consensus 2 ~~~~G~~aP~f~l~~~~--~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~ 79 (241)
T 1nm3_A 2 SSMEGKKVPQVTFRTRQ--GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND 79 (241)
T ss_dssp -CCTTSBCCCCEEEEEE--TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CccCCCCCCCeEEEccc--CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC
Confidence 56799999999998752 355 899999 89999999999999999999 999999999999999999 999999999
Q ss_pred HHhHHhhccCccccCCCCccc-eeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~-~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++.+++|.+.. +++ ||+++|.+++++++||+.........+....|++||| ++|+|+....|..
T Consensus 80 ~~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~ 144 (241)
T 1nm3_A 80 TFVMNAWKEDE-------KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN 144 (241)
T ss_dssp HHHHHHHHHHT-------TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCS
T ss_pred HHHHHHHHHhc-------CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEecc
Confidence 99999999853 665 9999999999999999975442100111244788999 9999987766543
No 64
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.92 E-value=1.8e-25 Score=189.83 Aligned_cols=131 Identities=19% Similarity=0.198 Sum_probs=114.9
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCC--eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGK--YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk--~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
..+.+|+++|+|++++. +|++++|++++|| ++||+||+++|||+|+.++|.|++++++|++++ ++++||.|+++
T Consensus 5 ~~~~~G~~~P~f~l~~~---~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~ 80 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNE---DNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVT 80 (159)
T ss_dssp TCCCTTCBCCSCEEECT---TSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHH
T ss_pred CcCCCCCCCCCeEEECC---CCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHH
Confidence 35679999999999776 9999999999987 899999999999999999999999999999889 99999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+++|.+.. +++||+++|.+++++++||+...+. .| ..+++||| ++|+|+....|..
T Consensus 81 ~~~~~~~~~-------~~~~~~l~D~~~~~~~~~gv~~~p~---~g--~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 81 SQKKFQSKQ-------NLPYHLLSDPKREFIGLLGAKKTPL---SG--SIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp HHHHHHHHH-------TCSSEEEECTTCHHHHHHTCBSSSS---SC--BCCEEEEE-ETTEEEEEEESCC
T ss_pred HHHHHHHHh-------CCCceEEECCccHHHHHhCCccccc---CC--ccceEEEE-cCCEEEEEEccCC
Confidence 999998853 7899999999999999999976541 12 24578999 9999998776654
No 65
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.92 E-value=2.5e-24 Score=187.72 Aligned_cols=133 Identities=26% Similarity=0.441 Sum_probs=118.5
Q ss_pred CCCCCCCCceeeeEEcCcce----eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 242 FVSKPAPFWQGTAVVDGQLK----EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~----~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
.+|+.+|+|++++. +|+ ++++++++||++||+||+++||++|+.++|.|++++++|++++++|++||.|+++.
T Consensus 2 ~~G~~~P~f~l~~~---~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~ 78 (187)
T 1we0_A 2 LIGTEVQPFRAQAF---QSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFV 78 (187)
T ss_dssp CTTCBCCCCEEEEE---CSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCcCCCeEEecc---CCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHH
Confidence 47899999999966 788 99999999999999999999999999999999999999999899999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+++|.+.+.... +++|+++.|.++.+++.||+.....+.+.|++||||++|+|++.+...
T Consensus 79 ~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 79 HKAWHENSPAVG---SIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp HHHHHHSCHHHH---TCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHhcccc---CCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecC
Confidence 999998763211 478999999999999999996555455899999999999999988653
No 66
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.92 E-value=2e-24 Score=190.20 Aligned_cols=139 Identities=36% Similarity=0.657 Sum_probs=119.7
Q ss_pred ccCCCCCCccEEEeeecCccc---eEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLK---EIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~---~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
+++|+++|+|++++. .++|+ +++|+++ +||++||+||+++|||+|+.++|.|++++++|+++++++++||.|+++
T Consensus 1 ~~~G~~~P~f~l~~~-~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~ 79 (198)
T 1zof_A 1 MVVTKLAPDFKAPAV-LGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQ 79 (198)
T ss_dssp CCTTSBCCCCEEEEE-CTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCcCCceEeecc-cCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHH
Confidence 368999999999764 22577 9999999 999999999999999999999999999999999999999999999999
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+++|.+.+.++.+..+++||++.|.+++++++||+.... | ...|++||||++|+|+....|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~-g-----~~~P~~~lid~~G~i~~~~~g~~ 143 (198)
T 1zof_A 80 VHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE-A-----IALRGAFLIDKNMKVRHAVINDL 143 (198)
T ss_dssp HHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT-T-----EECEEEEEEETTTEEEEEEEESS
T ss_pred HHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC-C-----cccceEEEECCCCEEEEEEecCC
Confidence 9999998765443334789999999999999999996532 2 35688999999999997766643
No 67
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.92 E-value=5.3e-25 Score=186.90 Aligned_cols=128 Identities=18% Similarity=0.165 Sum_probs=114.1
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCC--eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGK--YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk--~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
.+.+|+.+|+|+++ |.+|+++++++++|| ++||+||+++|||+|+.++|.|++++++|++++ +|++||.|+++.
T Consensus 6 ~~~~G~~~P~f~l~---~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~ 81 (159)
T 2a4v_A 6 ELEIGDPIPDLSLL---NEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTS 81 (159)
T ss_dssp CCCTTCBCCSCEEE---CTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHH
T ss_pred cCCCCCCCCCeEEE---CCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHH
Confidence 35789999999998 569999999999987 899999989999999999999999999999889 999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++|++++ +++||++.|.++++++.||+...+.....|++||| ++|+|++++..
T Consensus 82 ~~~~~~~~-------~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g 135 (159)
T 2a4v_A 82 QKKFQSKQ-------NLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVK 135 (159)
T ss_dssp HHHHHHHH-------TCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEES
T ss_pred HHHHHHHh-------CCCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEcc
Confidence 99999876 78999999999999999999654311146689999 99999998864
No 68
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.92 E-value=3e-24 Score=189.01 Aligned_cols=136 Identities=38% Similarity=0.651 Sum_probs=119.8
Q ss_pred CCCCCCCCceeeeEEcCcce---eeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 242 FVSKPAPFWQGTAVVDGQLK---EIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~---~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
.+|+.+|+|++++. ..+|+ +++++++ +||++||+||+++||++|+.++|.|++++++|++++++|++||.|+++.
T Consensus 2 ~~G~~~P~f~l~~~-~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 80 (198)
T 1zof_A 2 VVTKLAPDFKAPAV-LGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQV 80 (198)
T ss_dssp CTTSBCCCCEEEEE-CTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCcCCceEeecc-cCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHH
Confidence 47999999999843 22788 9999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++|.+.++++.+..+++|+++.|.++.+++.||+... .|.+.|++||||++|+|++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g 141 (198)
T 1zof_A 81 HFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFE-EAIALRGAFLIDKNMKVRHAVIN 141 (198)
T ss_dssp HHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEET-TTEECEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHhhhhcccccCceeEEEECCchHHHHHhCCccc-CCcccceEEEECCCCEEEEEEec
Confidence 99999986554433488999999999999999999542 23489999999999999998764
No 69
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.92 E-value=1.4e-24 Score=192.92 Aligned_cols=128 Identities=20% Similarity=0.144 Sum_probs=113.3
Q ss_pred ccCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCch-----HhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 238 RAIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCP-----TEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 238 ~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~-----~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
+..+.+|+.+|+|+++ |.+|+.++|++++||++||+||++.|||+|. .|++.|+++ | +|+.||+||.
T Consensus 19 g~~l~vG~~APdFtL~---d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~ 90 (224)
T 3keb_A 19 GDFPRKGDYLPSFMLV---DDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITV 90 (224)
T ss_dssp SCCCCTTCBCCCCEEE---ETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEES
T ss_pred cCcCCCCCCCCCeEEE---CCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEEC
Confidence 3445799999999998 5599999999999999999999888899999 999999888 4 7899999999
Q ss_pred CCHHhHHHHhcCccccCCCCCc-ceeEEecC-chHHHHHhCceecC---CCceeeEEEEEeCCceEEEEEecC
Q psy17178 313 DSHFTHLAWVNTPRKEGGLGKL-KIPLLSDL-THKISLDYGVYLSD---QGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 313 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~~~~---~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
|+++.+++|++.+ ++ +|++++|. ++.++++||+.... .|...|++||||++|+|++.+...
T Consensus 91 Ds~~~~~~f~~~~-------gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~ 156 (224)
T 3keb_A 91 DSPSSLARARHEH-------GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLA 156 (224)
T ss_dssp SCHHHHHHHHHHH-------CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECS
T ss_pred CCHHHHHHHHHHc-------CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecC
Confidence 9999999999987 77 79999998 69999999997643 345689999999999999988643
No 70
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=5.4e-25 Score=189.38 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=109.7
Q ss_pred cccCCCCCCccEEEeee-cCcc-----ceEEcccc-CCCeEEEEEeeCCCCCCchHH-HHHHHHhHHHHHhCCcE-EEEE
Q psy17178 50 SKNLSKPAPFWQGTAVV-DGQL-----KEIKLSDY-YGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTE-VVAA 120 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~-~~~g-----~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~-~~~l~~~~~~~~~~~v~-vi~V 120 (384)
+..+|+++|+|++++.. +++| ++++|+++ +||++||.||+++|||+|+.| +|.|++++++|+++|++ |++|
T Consensus 6 g~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 6 GTDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ----CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred cccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 34577899999998752 1235 89999997 998777776669999999999 99999999999999999 9999
Q ss_pred eCCCHHhHHhhccCccccCCCCc--cceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 121 SVDSHFTHLAWVNTPRKEGGLGK--LKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 121 s~d~~~~~~~~~~~~~~~~~~~~--~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|.|+++.+++|.+.. + ++||+++|.+++++++||+.........|....+.+|+|| +|+|+....|..
T Consensus 86 s~d~~~~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~ 155 (171)
T 2pwj_A 86 AINDPYTVNAWAEKI-------QAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEES 155 (171)
T ss_dssp ESSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECSS
T ss_pred eCCCHHHHHHHHHHh-------CCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeecC
Confidence 999999999998853 5 3799999999999999999754311011333346788889 999998776643
No 71
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.91 E-value=4.8e-25 Score=198.67 Aligned_cols=135 Identities=19% Similarity=0.267 Sum_probs=116.6
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCC-eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk-~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
+.+|+.+|+|++++. +| ++++++++|| ++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+.+.++
T Consensus 3 l~iG~~aPdF~l~~~---~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~ 78 (233)
T 2v2g_A 3 ITLGEVFPNFEADST---IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHK 78 (233)
T ss_dssp CCTTCBCCCCEEEET---TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCcEEecC---CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 468999999999854 88 9999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCC-CcceeEEecCchHHHHHhCceecC----C--CceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLG-KLKIPLLSDLTHKISLDYGVYLSD----Q--GHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~gv~~~~----~--~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++.+++..+.+ +++||++.|.+++++++||+...+ . +...|++||||++|+|++++..
T Consensus 79 ~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~ 145 (233)
T 2v2g_A 79 EWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILY 145 (233)
T ss_dssp HHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEec
Confidence 9998554321111 478999999999999999997432 1 2468999999999999998864
No 72
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=2.6e-24 Score=189.08 Aligned_cols=135 Identities=32% Similarity=0.539 Sum_probs=117.7
Q ss_pred cccCCCCCCccEEEeeecCc-------------c--ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCC
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQ-------------L--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 114 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~-------------g--~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~ 114 (384)
.+.+|+++|+|++++. + | ++++|++++||++||+|||++|||+|+.++|.|++++++|++++
T Consensus 3 ~l~~G~~~P~f~l~~~---~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~ 79 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTAL---IGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD 79 (195)
T ss_dssp BCCTTCBCCCCEEEEE---CSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT
T ss_pred cCCCCCcCCCcCcccc---cccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 4679999999999987 4 6 89999999999999999999999999999999999999999889
Q ss_pred cEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 115 TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 115 v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+++++|+.|+++.+++|.+.+. ...+++||++.|.++++++.||+... .| ...|++||||++|+|+....|
T Consensus 80 v~vv~Vs~d~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~v~~~-~g-----~~~P~~~lid~~G~i~~~~~g 150 (195)
T 2bmx_A 80 AQILGVSIDSEFAHFQWRAQHN---DLKTLPFPMLSDIKRELSQAAGVLNA-DG-----VADRVTFIVDPNNEIQFVSAT 150 (195)
T ss_dssp EEEEEEESSCHHHHHHHHHHCT---TGGGCCSCEEECTTSHHHHHHTCBCT-TS-----SBCEEEEEECTTSBEEEEEEE
T ss_pred CEEEEEECCCHHHHHHHHHHhc---cccCCceeEEeCCchHHHHHhCCccc-CC-----CccceEEEEcCCCeEEEEEec
Confidence 9999999999999999987541 12267899999999999999999654 22 246789999999999987766
Q ss_pred ee
Q psy17178 195 AL 196 (384)
Q Consensus 195 ~~ 196 (384)
..
T Consensus 151 ~~ 152 (195)
T 2bmx_A 151 AG 152 (195)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 73
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.91 E-value=2.1e-24 Score=183.12 Aligned_cols=130 Identities=27% Similarity=0.410 Sum_probs=116.0
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCC-eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk-~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
+.+|+.+|+|++. |.+|+.+++++++|| ++||+||+++||++|+.+++.|++++++++++++++++||.|+++.++
T Consensus 9 ~~~G~~~p~f~l~---~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~ 85 (160)
T 1xvw_A 9 LNVGATAPDFTLR---DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHK 85 (160)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHH
T ss_pred CCCCCCCCCeEeE---cCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHH
Confidence 5789999999998 559999999999998 999999889999999999999999999998889999999999999999
Q ss_pred HHhcCccccCCCCCcceeEEecC--chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDL--THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+|++++ +++|+++.|. ++.+++.||+.....+.+.|++||||++|+|++.+...
T Consensus 86 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~ 141 (160)
T 1xvw_A 86 IWATQS-------GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQ 141 (160)
T ss_dssp HHHHHH-------TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECC
T ss_pred HHHHhc-------CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecC
Confidence 999887 8899999995 89999999996443233334999999999999988753
No 74
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.91 E-value=6.2e-25 Score=186.38 Aligned_cols=131 Identities=27% Similarity=0.437 Sum_probs=115.5
Q ss_pred ccCCCCCCccEEEeeecCccceEEccccCCC-eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 129 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk-~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~ 129 (384)
+.+|+++|+|++.+. +|++++|++++|| ++||+||+++|||+|+.+++.|+++++++++.++++++|+.|+++.++
T Consensus 9 ~~~G~~~p~f~l~~~---~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~ 85 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQ---NQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHK 85 (160)
T ss_dssp CCTTSBCCCCEEECT---TSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHH
T ss_pred CCCCCCCCCeEeEcC---CCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHH
Confidence 789999999999776 9999999999998 999999999999999999999999999998889999999999999999
Q ss_pred hhccCccccCCCCccceeEEeeC--cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 130 AWVNTPRKEGGLGKLKIPLLSDL--THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~p~l~D~--~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+|.+.. +++||++.|. ++++++.||+..... + ...+++||||++|+|+....|..
T Consensus 86 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~~~~~----~-~p~~~~~lid~~G~i~~~~~g~~ 142 (160)
T 1xvw_A 86 IWATQS-------GFTFPLLSDFWPHGAVSQAYGVFNEQA----G-IANRGTFVVDRSGIIRFAEMKQP 142 (160)
T ss_dssp HHHHHH-------TCCSCEEECTTTTTHHHHHTTCEETTT----T-EECSEEEEECTTSBEEEEEECCT
T ss_pred HHHHhc-------CCCceEEecCCcChHHHHHcCCccccC----C-CeeeeEEEECCCCeEEEEEecCC
Confidence 998854 7899999996 899999999964431 2 22348999999999998777653
No 75
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.91 E-value=2.4e-24 Score=193.27 Aligned_cols=135 Identities=23% Similarity=0.316 Sum_probs=116.3
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCC-eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk-~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
+.+|+.+|+|++.+. +| +++++|++|| ++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+.+.++
T Consensus 5 l~~G~~aP~F~l~~~---~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~ 80 (224)
T 1prx_A 5 LLLGDVAPNFEANTT---VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHL 80 (224)
T ss_dssp CCTTCBCCCCEEEET---TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCcCCCCCcEEecC---CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 468999999999854 89 9999999997 777777669999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCC---CCcceeEEecCchHHHHHhCceecCC------CceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGL---GKLKIPLLSDLTHKISLDYGVYLSDQ------GHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~~~~~------~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|.+.+++..++ .+++||++.|.+++++++||+...+. ..+.|++||||++|+|++++..
T Consensus 81 ~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 81 AWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp HHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEec
Confidence 999875443321 27899999999999999999965421 2458999999999999998864
No 76
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.91 E-value=8.7e-25 Score=189.09 Aligned_cols=132 Identities=13% Similarity=0.180 Sum_probs=111.4
Q ss_pred ccCCCCCCccEEEeeec--------Ccc----ceEEccc-cCCCeEEEEEeeCCCCCCch-HHHHHHHHhHHHH-HhCCc
Q psy17178 51 KNLSKPAPFWQGTAVVD--------GQL----KEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEF-HQINT 115 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~--------~~g----~~~~l~~-~~gk~vvl~f~~~~~cp~C~-~~~~~l~~~~~~~-~~~~v 115 (384)
+++|+++|+|++++... .+| ++++|++ ++||++||+|||+.|||+|. .|++.|++.+++| ++.|+
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 36899999999987311 145 7999999 59999999999999999999 9999999999999 99999
Q ss_pred E-EEEEeCCCHHhHHhhccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCC--CCcccceeEEEEEEEecCCCcccc
Q psy17178 116 E-VVAASVDSHFTHLAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQ--GPVRGSLLSTAIFVYALTSPVNGY 191 (384)
Q Consensus 116 ~-vi~Vs~d~~~~~~~~~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~--g~~~g~~~~~~~~vid~~G~v~~~ 191 (384)
+ |++||.|+++++++|.+.. ++ +||+++|++++++++||+..+.. | .|....|++|||| +|+|+..
T Consensus 81 ~~V~gvS~D~~~~~~~~~~~~-------~~~~f~lLsD~~~~~a~~yGv~~~~~~~G--~g~~~~R~tfvId-dG~V~~~ 150 (182)
T 1xiy_A 81 DDIYCITNNDIYVLKSWFKSM-------DIKKIKYISDGNSSFTDSMNMLVDKSNFF--MGMRPWRFVAIVE-NNILVKM 150 (182)
T ss_dssp SEEEEEESSCHHHHHHHHHHT-------TCCSSEEEECTTSHHHHHTTCEEECGGGT--CCEEECCEEEEEE-TTEEEEE
T ss_pred cEEEEEeCCCHHHHHHHHHHc-------CCCCceEEEeCchHHHHHhCCceeccccC--CCCceEEEEEEEc-CCEEEEE
Confidence 5 9999999999999999853 55 69999999999999999986542 2 1334568899999 9999876
Q ss_pred c
Q psy17178 192 A 192 (384)
Q Consensus 192 ~ 192 (384)
.
T Consensus 151 ~ 151 (182)
T 1xiy_A 151 F 151 (182)
T ss_dssp E
T ss_pred E
Confidence 5
No 77
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.91 E-value=2.2e-24 Score=184.50 Aligned_cols=130 Identities=24% Similarity=0.315 Sum_probs=112.4
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|++.+. +|++++|++++||++||+||+++|||+|+.++|.|++++++| .++++++|+.|+++..
T Consensus 16 ~~~~~G~~~p~f~l~~~---~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~ 90 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVLTN---SLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQ 90 (167)
T ss_dssp CCCCTTSCCCCCEEEBT---TCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGT
T ss_pred CccCCCCcCCceEEECC---CCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHH
Confidence 35679999999999776 999999999999999999995445999999999999999999 7899999999998888
Q ss_pred HhhccCccccCCCCcc-ceeEEee-CcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D-~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.+ ++ +||++.| .++++++.||+.....| ...|++||||++|+|+....|.
T Consensus 91 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~v~~~~~g-----~~~p~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 91 ARWCGAN-------GIDKVETLSDHRDMSFGEAFGVYIKELR-----LLARSVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp SCCGGGS-------SCTTEEEEEGGGTCHHHHHTTCBBTTTC-----SBCCEEEEECTTSCEEEEEECS
T ss_pred HHHHHhc-------CCCCceEeeCCchhHHHHHhCCccccCC-----ceeeEEEEEcCCCcEEEEEecC
Confidence 8888753 77 8999999 88999999999654322 3467899999999999776654
No 78
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=1e-23 Score=185.21 Aligned_cols=134 Identities=31% Similarity=0.484 Sum_probs=117.2
Q ss_pred CCCCCCCCCceeeeEEcC-----------cc--eeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEE
Q psy17178 241 PFVSKPAPFWQGTAVVDG-----------QL--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEV 307 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~-----------~g--~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~v 307 (384)
+.+|+.+|+|++++. +. +| +++++++++||++||+||+++||++|+.++|.|++++++|++++++|
T Consensus 4 l~~G~~~P~f~l~~~-~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 4 LTIGDQFPAYQLTAL-IGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp CCTTCBCCCCEEEEE-CSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred CCCCCcCCCcCcccc-cccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 468999999999977 31 26 89999999999999999999999999999999999999999889999
Q ss_pred EEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 308 VAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 308 v~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++||.|+++.+++|.+.+... .+++|+++.|.++.+++.||+... .|.+.|++||||++|+|++++..
T Consensus 83 v~Vs~d~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g 150 (195)
T 2bmx_A 83 LGVSIDSEFAHFQWRAQHNDL---KTLPFPMLSDIKRELSQAAGVLNA-DGVADRVTFIVDPNNEIQFVSAT 150 (195)
T ss_dssp EEEESSCHHHHHHHHHHCTTG---GGCCSCEEECTTSHHHHHHTCBCT-TSSBCEEEEEECTTSBEEEEEEE
T ss_pred EEEECCCHHHHHHHHHHhccc---cCCceeEEeCCchHHHHHhCCccc-CCCccceEEEEcCCCeEEEEEec
Confidence 999999999999998875221 268899999999999999999533 23389999999999999998864
No 79
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.91 E-value=4.6e-24 Score=182.45 Aligned_cols=128 Identities=22% Similarity=0.255 Sum_probs=113.6
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCC-CcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDF-TFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~-c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
....+|+.+|+|+++ |.+|+++++++++||++||+|| ++| |++|+.++|.|+++++++ .++++++||.|+++.
T Consensus 16 ~~~~~G~~~p~f~l~---~~~G~~~~l~~~~gk~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~ 89 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVL---TNSLEEKSLADMKGKVTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFA 89 (167)
T ss_dssp CCCCTTSCCCCCEEE---BTTCCEEEHHHHTTSCEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGG
T ss_pred CccCCCCcCCceEEE---CCCCCEeeHHHhCCCeEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHH
Confidence 345789999999998 5599999999999999999999 666 999999999999999999 789999999999888
Q ss_pred HHHHhcCccccCCCCCc-ceeEEec-CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKL-KIPLLSD-LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++|.+++ ++ +||++.| .++.+++.||+...+.|...|++||||++|+|++++..
T Consensus 90 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g 146 (167)
T 2jsy_A 90 QARWCGAN-------GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYV 146 (167)
T ss_dssp TSCCGGGS-------SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEEC
T ss_pred HHHHHHhc-------CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEec
Confidence 88888765 77 8999999 88999999999665444557999999999999998864
No 80
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.91 E-value=1.4e-23 Score=179.50 Aligned_cols=133 Identities=19% Similarity=0.204 Sum_probs=117.6
Q ss_pred CCCCCCCCCCceeeeEEc-------Ccceeeecccc-CCCeEEEEEEeCCCCcCchH-hHHHHHHHHHHHHhCCc-EEEE
Q psy17178 240 IPFVSKPAPFWQGTAVVD-------GQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEFHQINT-EVVA 309 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d-------~~g~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~-~~~~l~~l~~~~~~~~v-~vv~ 309 (384)
+.++|+.+|+.++..+.+ ...++++|+|+ +||++||+|||++|||+|.. |++.|++.+++|+++|+ +|++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 457999999999998854 34478999997 99999999999999999999 99999999999999999 9999
Q ss_pred EeCCCHHhHHHHhcCccccCCCCCcc--eeEEecCchHHHHHhCceecC--CC--c-eeeEEEEEeCCceEEEEEecC
Q psy17178 310 ASVDSHFTHLAWVNTPRKEGGLGKLK--IPLLSDLTHKISLDYGVYLSD--QG--H-TLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 310 Is~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~~~~--~~--~-~~p~~~lId~~G~i~~~~~~~ 380 (384)
||+|+++.+++|.++. +++ ||+++|++++++++||+.... .| . ..|.+||| ++|+|++++...
T Consensus 89 IS~D~~~~~~~f~~~~-------~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~ 158 (176)
T 4f82_A 89 VSVNDAFVMGAWGRDL-------HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVEA 158 (176)
T ss_dssp EESSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEECC
T ss_pred EeCCCHHHHHHHHHHh-------CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEcC
Confidence 9999999999999876 666 999999999999999997653 22 2 45899999 999999998865
No 81
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.91 E-value=1.1e-23 Score=181.90 Aligned_cols=126 Identities=24% Similarity=0.341 Sum_probs=107.4
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHL 319 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 319 (384)
.+.+|+.+|+|+++ |.+|+.+++++++||++||+||++.||++|+.++|.|++++++ .+++||+||.|+++.++
T Consensus 17 ~l~~G~~~P~f~l~---~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~ 90 (175)
T 1xvq_A 17 LPAVGSPAPAFTLT---GGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQK 90 (175)
T ss_dssp CCCTTSBCCCCEEE---CTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHT
T ss_pred CCCcCCcCCCeEEE---CCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHH
Confidence 35689999999998 5699999999999999999999444499999999999999987 78999999999998888
Q ss_pred HHhcCccccCCCCCc-ceeEEecCchHHHHHhCceecC---CCceeeEEEEEeCCceEEEEEe
Q psy17178 320 AWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSD---QGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~---~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+|++++ ++ +|+++.|.++.+++.||+...+ .+...|++||||++|+|++.+.
T Consensus 91 ~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 91 RFCGAE-------GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp TCC-------------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred HHHHHc-------CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEE
Confidence 888765 77 8999999999999999996543 2355699999999999999886
No 82
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.91 E-value=8.5e-24 Score=191.99 Aligned_cols=130 Identities=19% Similarity=0.304 Sum_probs=115.2
Q ss_pred CCCCCCCCCceeeeEEcCcce--eeeccc-cCCCeEEEEEEeCCCCcCch-HhHHHHHHHHHHHHhCCc-EEEEEeCCCH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLK--EIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEFHQINT-EVVAASVDSH 315 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~--~~~l~d-~~Gk~vvl~F~~a~~c~~C~-~~~~~l~~l~~~~~~~~v-~vv~Is~d~~ 315 (384)
+.+|+.+|+|+++++ .+|+ +++|++ ++||++||+||+++|||+|+ .|+|.|++++++|+++|+ +|++||.|++
T Consensus 3 ~~~G~~aP~f~l~~~--~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~ 80 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTR--QGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDT 80 (241)
T ss_dssp CCTTSBCCCCEEEEE--ETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCH
T ss_pred ccCCCCCCCeEEEcc--cCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCH
Confidence 468999999999964 1566 999999 89999999999999999999 999999999999999999 9999999999
Q ss_pred HhHHHHhcCccccCCCCCcc-eeEEecCchHHHHHhCceecCC--Cc---eeeEEEEEeCCceEEEEEecC
Q psy17178 316 FTHLAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQ--GH---TLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv~~~~~--~~---~~p~~~lId~~G~i~~~~~~~ 380 (384)
+.+++|.+++ +++ ||+++|++++++++||+..... |. ..|++||| ++|+|++.+...
T Consensus 81 ~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~ 143 (241)
T 1nm3_A 81 FVMNAWKEDE-------KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEP 143 (241)
T ss_dssp HHHHHHHHHT-------TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECC
T ss_pred HHHHHHHHhc-------CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEec
Confidence 9999999876 665 9999999999999999975432 22 56899999 999999988754
No 83
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.91 E-value=4e-24 Score=191.35 Aligned_cols=135 Identities=20% Similarity=0.307 Sum_probs=114.8
Q ss_pred CCCCCCCCCceeeeEEcC--cceeeeccccCCC-eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 241 PFVSKPAPFWQGTAVVDG--QLKEIKLSDYYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~--~g~~~~l~d~~Gk-~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
+.+|+.+|+|+++ +. +| ++++++++|| ++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+.+.
T Consensus 3 l~iG~~aP~F~l~---~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~ 78 (220)
T 1xcc_A 3 YHLGATFPNFTAK---ASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKES 78 (220)
T ss_dssp CCTTCBCCCCEEC---BTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred CCCCCCCCCcEee---cccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHH
Confidence 4689999999998 55 78 9999999998 7777776699999999999999999999999999999999999999
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCC------CceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ------GHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~------~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++|.+..++..+..+++||++.|.+++++++||+...+. +...|++||||++|+|++++..
T Consensus 79 ~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~ 146 (220)
T 1xcc_A 79 HDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLY 146 (220)
T ss_dssp HHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEec
Confidence 9999885432200117899999999999999999965321 1468999999999999998864
No 84
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.90 E-value=6e-24 Score=183.48 Aligned_cols=131 Identities=24% Similarity=0.316 Sum_probs=108.7
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+.+|+++|+|++++. +|+++++++++||++||+||+++|||+|+.++|.|++++++ .++++|+||.|+++..
T Consensus 16 ~~l~~G~~~P~f~l~~~---~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~ 89 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLTGG---DLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQ 89 (175)
T ss_dssp CCCCTTSBCCCCEEECT---TSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHH
T ss_pred CCCCcCCcCCCeEEECC---CCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHH
Confidence 35679999999999776 99999999999999999999666699999999999999988 6899999999999988
Q ss_pred HhhccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.. ++ +||++.|.+++++++||+...+.+ ..| ...|.+||||++|+|+....|
T Consensus 90 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~-~~g-~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 90 KRFCGAE-------GTENVMPASAFRDSFGEDYGVTIADGP-MAG-LLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp TTCC-------------CEEEEECTTSSHHHHTTCBBCSST-TTT-SBCSEEEEECTTSBEEEEEEC
T ss_pred HHHHHHc-------CCCCceEeeCCHHHHHHHhCCcccccc-cCC-cccceEEEECCCCeEEEEEEC
Confidence 8888753 77 899999999999999999755311 122 345789999999999876653
No 85
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=1.9e-24 Score=204.02 Aligned_cols=118 Identities=22% Similarity=0.208 Sum_probs=103.7
Q ss_pred CCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccC
Q psy17178 55 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNT 134 (384)
Q Consensus 55 ~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~ 134 (384)
.++|+|+|++. +|++++|+||+||+|||+|||++|||+|+.|++.|++. +..+++|+|||.|+++.+++|.+.
T Consensus 2 ak~p~F~l~~~---~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~ 74 (322)
T 4eo3_A 2 ARVKHFELLTD---EGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEK 74 (322)
T ss_dssp CBCCCCEEEET---TSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHH
T ss_pred CCCCCcEEECC---CcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHh
Confidence 36899999887 99999999999999999999999999999999998752 335899999999999999999985
Q ss_pred ccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccc
Q psy17178 135 PRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAG 193 (384)
Q Consensus 135 ~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~ 193 (384)
. +++||+++|++++++++|||+... ...|++||||++|+|+....
T Consensus 75 ~-------~l~fp~l~D~~~~v~~~ygv~~~~-------~~~r~tfiId~~G~i~~~~~ 119 (322)
T 4eo3_A 75 N-------DLKVTLLSDPEGILHEFFNVLENG-------KTVRSTFLIDRWGFVRKEWR 119 (322)
T ss_dssp H-------TCCSEEEECTTCHHHHHTTCEETT-------EECCEEEEECTTSBEEEEEE
T ss_pred h-------CCceEEEEcCchHHHHhcCCCCCC-------cCccEEEEECCCCEEEEEEe
Confidence 3 899999999999999999996432 34588999999999986543
No 86
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.90 E-value=1.2e-23 Score=174.52 Aligned_cols=117 Identities=13% Similarity=0.016 Sum_probs=108.1
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHH---HHHHHHhCCcEEEEEeCC-CHHh
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND---RLEEFHQINTEVVAASVD-SHFT 317 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~---l~~~~~~~~v~vv~Is~d-~~~~ 317 (384)
.+|+.+|+|+++ |.+|+.+++++++||++||+|| ++||++|+.++|.|.+ +++++++.++.+++|+.| +++.
T Consensus 2 ~~G~~~p~f~l~---~~~g~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (142)
T 3ewl_A 2 NAGMKAADFTYV---TVHGDNSRMSRLKAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREE 77 (142)
T ss_dssp CTTSBCCCCEEE---CTTCCEEEGGGCCCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHH
T ss_pred CCCCcCCCCEEE---CCCCCEEEhhhcCCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHH
Confidence 479999999998 5599999999999999999999 9999999999999999 999999999999999998 5677
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHH--HhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISL--DYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
.++|++++ +++|+++.|.++.+.. .||+ ..+|++||||++|+|++
T Consensus 78 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 78 WATKAVYM-------PQGWIVGWNKAGDIRTRQLYDI------RATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHHHHTTS-------CTTCEEEECTTCHHHHTTCSCC------CSSSEEEEECTTCBEEE
T ss_pred HHHHHHHc-------CCCcceeeCCccchhhHHHcCC------CCCCeEEEECCCCCEEe
Confidence 88888876 8999999999998877 8998 68999999999999997
No 87
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.90 E-value=8e-24 Score=191.99 Aligned_cols=136 Identities=28% Similarity=0.495 Sum_probs=118.2
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeec-ccc--CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKL-SDY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF 316 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l-~d~--~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~ 316 (384)
.+.+|+.+|+|++++. +| .+++ +++ +||++||+||+++|||+|+.|++.|++++++|+++|++||+||+|+.+
T Consensus 4 ~~~iG~~aPdF~l~~~---~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTD---HG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp ECCTTSBCCCEEEEET---TE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEEcC---CC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 3568999999999855 78 7999 999 999877766669999999999999999999999999999999999999
Q ss_pred hHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCc-eeeEEEEEeCCceEEEEEecC
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGH-TLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~-~~p~~~lId~~G~i~~~~~~~ 380 (384)
.+.+|.+.+++..+. +++||++.|.++++++.||+.....|. ..|++||||++|+|++++...
T Consensus 80 ~~~~w~~~~~~~~~~-~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~ 143 (249)
T 3a2v_A 80 SHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYP 143 (249)
T ss_dssp HHHHHHHHHHHHTCC-CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHhcCC-CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecC
Confidence 999998876543332 789999999999999999997555443 789999999999999987643
No 88
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.90 E-value=3.7e-24 Score=178.20 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=104.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTH 318 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~ 318 (384)
...+|+.+|+|++ +. +|+++++++++||++||+|| ++||++|..++|.|++++++|+++++.|++||.| +.+..
T Consensus 6 ~l~~G~~~P~f~l-~~---~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (143)
T 4fo5_A 6 GVNPGDLAPRIEF-LG---NDAKASFHNQLGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIF 80 (143)
T ss_dssp SSSTTSBCCCCCC---------CCCSCCSSCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHH
T ss_pred ccCCcccCCceEE-cC---CCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHH
Confidence 3578999999999 66 89999999999999999999 9999999999999999999999889999999998 55677
Q ss_pred HHHhcCccccCCCCCcce-eEEecCc---hHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKLKI-PLLSDLT---HKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~-~~~~D~~---~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
++++++. +++| +.+.|.. ..+++.||+ ...|++||||++|+|++++.
T Consensus 81 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 131 (143)
T 4fo5_A 81 TETVKID-------KLDLSTQFHEGLGKESELYKKYDL------RKGFKNFLINDEGVIIAANV 131 (143)
T ss_dssp HHHHHHH-------TCCGGGEEECTTGGGSHHHHHTTG------GGCCCEEEECTTSBEEEESC
T ss_pred HHHHHHh-------CCCCceeeecccccchHHHHHcCC------CCCCcEEEECCCCEEEEccC
Confidence 8888766 7888 8888875 688999999 68899999999999998654
No 89
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.90 E-value=1.8e-23 Score=173.76 Aligned_cols=121 Identities=11% Similarity=-0.058 Sum_probs=108.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHH---HHHHHHhCCcEEEEEeCCCH-H
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND---RLEEFHQINTEVVAASVDSH-F 316 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~---l~~~~~~~~v~vv~Is~d~~-~ 316 (384)
..+|+.+|+|++++ .+|+.+++++++||++||+|| ++||++|+.++|.|++ +++++++.++.|++|+.|+. +
T Consensus 5 ~~~G~~ap~f~l~~---~~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~ 80 (142)
T 3eur_A 5 NRLGTKALNFTYTL---DSGVKGTLYQFPAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELD 80 (142)
T ss_dssp TCTTSBCCCCEEEE---TTSCEEETTTCCCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHH
T ss_pred hcCCCccCCcEEEc---CCCCEeeHHHcCCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHH
Confidence 36899999999985 499999999999999999999 9999999999999999 99999999999999999864 5
Q ss_pred hHHHHhcCccccCCCCCcceeEEecCchH--HHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLSDLTHK--ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..+++++++ +.+|+.+.|.++. +.+.|++ ...|++||||++|+|++...
T Consensus 81 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 81 EWKKHRNDF-------AKEWTNGYDKELVIKNKNLYDL------RAIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp HHHHHGGGS-------CTTSEEEECTTCHHHHTTCSCC------TTCSEEEEECTTCBEEEEEE
T ss_pred HHHHHHHhc-------ccccccccCccchhhhhhhcCC------CcCCeEEEECCCCcEEecCC
Confidence 667777765 7889999998865 6788998 68999999999999998654
No 90
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=2.3e-23 Score=174.78 Aligned_cols=121 Identities=13% Similarity=0.149 Sum_probs=110.4
Q ss_pred CCCCCCCCCceeeeEEcCcceeeecc--ccCCCeEEEEEEeCCCCcC--chHhHHHHHHHHHHH-HhCCcEEEEEeCCC-
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLS--DYYGKYLVFFFYPLDFTFV--CPTEILAFNDRLEEF-HQINTEVVAASVDS- 314 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~--d~~Gk~vvl~F~~a~~c~~--C~~~~~~l~~l~~~~-~~~~v~vv~Is~d~- 314 (384)
..+|+.+|+|+++ |.+|++++++ +++||++||+|| ++||++ |+.++|.|++++++| +++++.+++|+.|+
T Consensus 5 l~~G~~~p~f~l~---~~~g~~~~l~~~~~~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~ 80 (150)
T 3fw2_A 5 SEIGKYAPFFSLP---NAKGEKITRSSDAFKQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVD 80 (150)
T ss_dssp TSTTSBCCCCCEE---BTTCCEECTTSTTTTTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSC
T ss_pred ccCCCcCCccEeE---CCCCCEEecchhhhCCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCC
Confidence 4689999999998 5599999999 999999999999 899999 999999999999999 88899999999985
Q ss_pred HHhHHHHhcCccccCCCCCcceeEEecC---chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
++..++|++++ +++|+++.|. ++.+.+.||+ ...|++||||++|+|++.+.
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 81 KQQWKDAIKRD-------TLDWEQVCDFGGLNSEVAKQYSI------YKIPANILLSSDGKILAKNL 134 (150)
T ss_dssp HHHHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTC------CSSSEEEEECTTSBEEEESC
T ss_pred HHHHHHHHHHh-------CCCceEEEcCcccchHHHHHcCC------CccCeEEEECCCCEEEEccC
Confidence 47788888766 8999999998 5799999999 68899999999999999764
No 91
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.90 E-value=2.3e-23 Score=179.18 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=108.2
Q ss_pred CCCCCCCCceeeeEE-cCcc-----eeeecccc-CCCeEEEEEEeCCCCcCchHh-HHHHHHHHHHHHhCCcE-EEEEeC
Q psy17178 242 FVSKPAPFWQGTAVV-DGQL-----KEIKLSDY-YGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTE-VVAASV 312 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~-d~~g-----~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~-~~~l~~l~~~~~~~~v~-vv~Is~ 312 (384)
.+|+.+|+|+++++. +.+| +.++++++ +||++||.|++++|||+|+.| +|.|++++++|+++|++ |++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 467799999998541 0246 89999996 998555554449999999999 99999999999999999 999999
Q ss_pred CCHHhHHHHhcCccccCCCCC--cceeEEecCchHHHHHhCceecCC----Cc-eeeEEEEEeCCceEEEEEecC
Q psy17178 313 DSHFTHLAWVNTPRKEGGLGK--LKIPLLSDLTHKISLDYGVYLSDQ----GH-TLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 313 d~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~gv~~~~~----~~-~~p~~~lId~~G~i~~~~~~~ 380 (384)
|+++.+++|++++ + .+||+++|++++++++||+..... |. ..|++|+|| +|+|++++...
T Consensus 88 d~~~~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~ 154 (171)
T 2pwj_A 88 NDPYTVNAWAEKI-------QAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEE 154 (171)
T ss_dssp SCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECS
T ss_pred CCHHHHHHHHHHh-------CCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeec
Confidence 9999999999876 5 479999999999999999975432 21 367899999 99999988753
No 92
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=1.5e-23 Score=197.90 Aligned_cols=121 Identities=23% Similarity=0.234 Sum_probs=108.3
Q ss_pred CCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcC
Q psy17178 245 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNT 324 (384)
Q Consensus 245 ~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~ 324 (384)
..+|+|+|+ |.+|++++|+||+||++||+||++.|||+|..|++.|++. ..++++|++||.|+++.+++|.++
T Consensus 2 ak~p~F~l~---~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~ 74 (322)
T 4eo3_A 2 ARVKHFELL---TDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEK 74 (322)
T ss_dssp CBCCCCEEE---ETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHH
T ss_pred CCCCCcEEE---CCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHh
Confidence 368999999 5599999999999999999999999999999999988652 236899999999999999999988
Q ss_pred ccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecCC
Q psy17178 325 PRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 325 ~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
+ +++||+++|++++++++||++.. +...|+|||||++|+|+++|+.-.
T Consensus 75 ~-------~l~fp~l~D~~~~v~~~ygv~~~--~~~~r~tfiId~~G~i~~~~~~v~ 122 (322)
T 4eo3_A 75 N-------DLKVTLLSDPEGILHEFFNVLEN--GKTVRSTFLIDRWGFVRKEWRRVK 122 (322)
T ss_dssp H-------TCCSEEEECTTCHHHHHTTCEET--TEECCEEEEECTTSBEEEEEESCC
T ss_pred h-------CCceEEEEcCchHHHHhcCCCCC--CcCccEEEEECCCCEEEEEEeCCC
Confidence 7 89999999999999999999754 367899999999999999997643
No 93
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.90 E-value=1.6e-23 Score=187.39 Aligned_cols=122 Identities=16% Similarity=0.078 Sum_probs=112.3
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCe-EEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC-----
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV----- 312 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~-vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~----- 312 (384)
....+|+.+|+|+++ |.+|+++++++++||+ +||+|| ++|||+|+.++|.|++++++|++++++||+|+.
T Consensus 30 ~~l~~G~~aP~f~l~---~~~G~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~ 105 (218)
T 3u5r_E 30 NSITLGTRAADFVLP---DAGGNLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQA 105 (218)
T ss_dssp CCCCTTCBCCCCCEE---CTTCCEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTT
T ss_pred CcCCCCCcCCCcEeE---CCCCCEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccc
Confidence 445799999999998 5599999999999995 999999 899999999999999999999999999999999
Q ss_pred ---CCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEE
Q psy17178 313 ---DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWF 377 (384)
Q Consensus 313 ---d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~ 377 (384)
|+++.+++|++++ +++|+++.|.++.+++.||+ ...|++||||++|+|+++.
T Consensus 106 ~~~d~~~~~~~~~~~~-------~~~~~~l~D~~~~~~~~~~v------~~~P~~~liD~~G~i~~~g 160 (218)
T 3u5r_E 106 FPEETLERVGAEVKAY-------GYGFPYLKDASQSVAKAYGA------ACTPDFFLYDRERRLVYHG 160 (218)
T ss_dssp CGGGSHHHHHHHHHHH-------TCCSCEEECTTCHHHHHHTC------CEESEEEEECTTCBEEEEE
T ss_pred cccCCHHHHHHHHHHh-------CCCccEEECCccHHHHHcCC------CCCCeEEEECCCCcEEEec
Confidence 6778888998877 89999999999999999999 6889999999999999854
No 94
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.90 E-value=1.9e-23 Score=176.59 Aligned_cols=122 Identities=15% Similarity=0.077 Sum_probs=110.2
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHh-HHHHHHHHHHHHhCCcEEEEEeC-------CC
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTEVVAASV-------DS 314 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~-~~~l~~l~~~~~~~~v~vv~Is~-------d~ 314 (384)
.|+.+|+|+++++ ..+|+++++++++||++||+|| ++||++|+.+ +|.|++++++|+++++.+++|+. |+
T Consensus 2 ~g~~aP~f~l~~~-~~~g~~~~l~~~~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQW-FNSATDLTLADLRGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEE-ESCSSCCCTGGGTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhh-hcCCCccCHHHhCCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 5788999999964 2468999999999999999999 9999999997 99999999999888999999996 47
Q ss_pred HHhHHHHhcCccccCCCCCcceeEEecCch-----HHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTH-----KISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++.+++|++++ +++||++.|.++ .+++.||+ ..+|++||||++|+|++++..
T Consensus 80 ~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 136 (158)
T 3eyt_A 80 PISLKAFLHEY-------RIKFPVGVDQPGDGAMPRTMAAYQM------RGTPSLLLIDKAGDLRAHHFG 136 (158)
T ss_dssp HHHHHHHHHHT-------TCCSCEEEECCCSSSSCHHHHHTTC------CSSSEEEEECTTSEEEEEEES
T ss_pred HHHHHHHHHHc-------CCCceEEEcCccchhhHHHHHHcCC------CCCCEEEEECCCCCEEEEEeC
Confidence 78889998876 889999999987 79999999 689999999999999997764
No 95
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.89 E-value=6.2e-23 Score=172.86 Aligned_cols=124 Identities=16% Similarity=0.033 Sum_probs=107.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHH-hH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHF-TH 318 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~-~~ 318 (384)
....|+.+|+|+++ |.+|+++++++++||++||+|| ++||++|+.++|.|++++++|+++++.|++|+.|+.+ ..
T Consensus 8 ~~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~ 83 (152)
T 2lrt_A 8 DKIKEASIIDIQLK---DLKGNTRSLTDLKGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFW 83 (152)
T ss_dssp SSSCTTCSCCCCEE---BTTSCEECTTTGGGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHH
T ss_pred hhccCCCCCCeEEE---cCCCCEEeHHHhCCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 34678999999998 5599999999999999999999 8999999999999999999999989999999998653 34
Q ss_pred HHHhcCccccCCCCCcceeEEecCchH---HHHHhCceecCCCceeeEEEEEeCCceEEEEEecCCCC
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHK---ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERGNCD 383 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~~~d 383 (384)
+++.+ .++|+++.|.++. +.+.||+ ...|++||||++|+|++++. |..|
T Consensus 84 ~~~~~---------~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~-g~~~ 135 (152)
T 2lrt_A 84 KTSAD---------NLPWVCVRDANGAYSSYISLYNV------TNLPSVFLVNRNNELSARGE-NIKD 135 (152)
T ss_dssp HHHHT---------TCSSEEEECSSGGGCHHHHHHTC------CSCSEEEEEETTTEEEEETT-TCSC
T ss_pred HHHHh---------CCCceEEECCCCcchHHHHHcCc------ccCceEEEECCCCeEEEecC-CHHH
Confidence 44543 4689999999986 9999999 67899999999999999665 4444
No 96
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.89 E-value=9.6e-23 Score=175.04 Aligned_cols=131 Identities=11% Similarity=0.120 Sum_probs=111.0
Q ss_pred ccCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCc-CchHhHHHHHHHHHHHHhCC--cEEEEEeCC-
Q psy17178 238 RAIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQIN--TEVVAASVD- 313 (384)
Q Consensus 238 ~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~-~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d- 313 (384)
.....+|+.+|+|+++ |.+|+++++++++||++||+|| ++||+ +|+.+++.|+++++++++++ ++||+||.|
T Consensus 4 ~~~l~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 4 QIKDPLNYEVEPFTFQ---NQDGKNVSLESLKGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp CCCSCCCEECCCCEEE---CTTSCEEETGGGTTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCcCccccccCCcEEE---cCCCCEEehhhcCCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 3445789999999998 5599999999999999999999 99999 99999999999999999876 999999997
Q ss_pred ---CHHhHHHHhcCccccCCCCCcce---eEEecCchHHHHHhCc-----eecC-----CCceeeEEEEEeCCceEEEEE
Q psy17178 314 ---SHFTHLAWVNTPRKEGGLGKLKI---PLLSDLTHKISLDYGV-----YLSD-----QGHTLDKYCLECYKMVIVYWF 377 (384)
Q Consensus 314 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~gv-----~~~~-----~~~~~p~~~lId~~G~i~~~~ 377 (384)
+++.+++|++++ +++| +++.|.++.+.+.|++ .... ...+.|++||||++|+|++++
T Consensus 80 ~~d~~~~~~~~~~~~-------~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~ 152 (174)
T 1xzo_A 80 ENDKPKQLKKFAANY-------PLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDY 152 (174)
T ss_dssp TTCCHHHHHHHHTTS-------CCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEE
T ss_pred CCCCHHHHHHHHHHc-------CCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEE
Confidence 578888998876 6777 9999988887777653 1110 114689999999999999987
Q ss_pred ec
Q psy17178 378 ER 379 (384)
Q Consensus 378 ~~ 379 (384)
..
T Consensus 153 ~g 154 (174)
T 1xzo_A 153 NG 154 (174)
T ss_dssp ES
T ss_pred cC
Confidence 64
No 97
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.89 E-value=1.7e-23 Score=173.86 Aligned_cols=121 Identities=12% Similarity=-0.046 Sum_probs=104.2
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHH---hHHHHHhCCcEEEEEeCCC-H
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND---RLEEFHQINTEVVAASVDS-H 125 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~---~~~~~~~~~v~vi~Vs~d~-~ 125 (384)
...+|+++|+|++++. +|+.++|++++||++||+|| ++|||+|+.++|.|++ +++++++.++++++|+.|. .
T Consensus 4 ~~~~G~~ap~f~l~~~---~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~ 79 (142)
T 3eur_A 4 KNRLGTKALNFTYTLD---SGVKGTLYQFPAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL 79 (142)
T ss_dssp TTCTTSBCCCCEEEET---TSCEEETTTCCCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH
T ss_pred hhcCCCccCCcEEEcC---CCCEeeHHHcCCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH
Confidence 3569999999999887 99999999999999999999 9999999999999999 9999999999999999987 3
Q ss_pred HhHHhhccCccccCCCCccceeEEeeCcch--hHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 126 FTHLAWVNTPRKEGGLGKLKIPLLSDLTHK--ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~--~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
+..++|.+. + +++|+.+.|.++. +++.|++. ..|++||||++|+|+...
T Consensus 80 ~~~~~~~~~---~----~~~~~~~~d~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 80 DEWKKHRND---F----AKEWTNGYDKELVIKNKNLYDLR-----------AIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp HHHHHHGGG---S----CTTSEEEECTTCHHHHTTCSCCT-----------TCSEEEEECTTCBEEEEE
T ss_pred HHHHHHHHh---c----ccccccccCccchhhhhhhcCCC-----------cCCeEEEECCCCcEEecC
Confidence 555666654 3 7899999998875 68888882 245789999999997543
No 98
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.89 E-value=9.2e-23 Score=174.26 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=115.8
Q ss_pred cCCCCCCCCCCceeeeEEcCc-ceeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcE-EEEEeCCCH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQ-LKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTE-VVAASVDSH 315 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~-g~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~-vv~Is~d~~ 315 (384)
.+.++|+.+|+|+++ +.+ ++.++|+++ +||++||+|||+.|||.|..|++.+++.+++|++.|++ |++||.|++
T Consensus 12 ~~~~vGd~aPdf~l~---~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~ 88 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVY---EDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDP 88 (171)
T ss_dssp CCCCTTCBCCCCEEE---CSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCH
T ss_pred CcccCcCCCCCeEEe---cCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 345799999999998 223 289999995 99999999999999999999999999999999999996 999999999
Q ss_pred HhHHHHhcCccccCCCCCc--ceeEEecCchHHHHHhCceecCC----C-ceeeEEEEEeCCceEEEEEecCC
Q psy17178 316 FTHLAWVNTPRKEGGLGKL--KIPLLSDLTHKISLDYGVYLSDQ----G-HTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~gv~~~~~----~-~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
..+++|.+.. ++ +|++++|++++++++||+..... + ...+.+|||| +|+|++.+...+
T Consensus 89 ~~~~~w~~~~-------~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~ 153 (171)
T 2xhf_A 89 FVMAAWGKTV-------DPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPD 153 (171)
T ss_dssp HHHHHHHHHH-------CTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTS
T ss_pred HHHHHHHHhc-------CCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCC
Confidence 9999999876 55 89999999999999999975531 1 3578899999 999999987643
No 99
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.89 E-value=1.9e-23 Score=173.43 Aligned_cols=117 Identities=15% Similarity=0.061 Sum_probs=104.0
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHH---hHHHHHhCCcEEEEEeCC-CHHh
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND---RLEEFHQINTEVVAASVD-SHFT 127 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~---~~~~~~~~~v~vi~Vs~d-~~~~ 127 (384)
++|+++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|.+ +++++++.++++++|+.| +.+.
T Consensus 2 ~~G~~~p~f~l~~~---~g~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (142)
T 3ewl_A 2 NAGMKAADFTYVTV---HGDNSRMSRLKAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREE 77 (142)
T ss_dssp CTTSBCCCCEEECT---TCCEEEGGGCCCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHH
T ss_pred CCCCcCCCCEEECC---CCCEEEhhhcCCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHH
Confidence 58999999999877 99999999999999999999 9999999999999998 999999999999999998 4667
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHH--hhcCcccCCCCcccceeEEEEEEEecCCCccc
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISL--DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNG 190 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~--~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~ 190 (384)
.++|.+.. +++||++.|.++.+.. .||+. ..|++|+||++|+|+.
T Consensus 78 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 78 WATKAVYM-------PQGWIVGWNKAGDIRTRQLYDIR-----------ATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHHHHTTS-------CTTCEEEECTTCHHHHTTCSCCC-----------SSSEEEEECTTCBEEE
T ss_pred HHHHHHHc-------CCCcceeeCCccchhhHHHcCCC-----------CCCeEEEECCCCCEEe
Confidence 77777743 7899999999998877 88882 3457899999999975
No 100
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.89 E-value=7.7e-23 Score=171.96 Aligned_cols=121 Identities=17% Similarity=0.101 Sum_probs=109.9
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~~ 319 (384)
..+|+.+|+|++. |.+|+.+++++++||++||+|| ++||++|+.++|.|++++++++++++.+++|+.| +.+..+
T Consensus 3 l~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~ 78 (152)
T 2lrn_A 3 LATGSVAPAITGI---DLKGNSVSLNDFKGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWK 78 (152)
T ss_dssp SCTTEECCCCEEE---CSSSCEEESGGGTTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHH
T ss_pred ccCCCcCCCceeE---cCCCCEEeHHHcCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHH
Confidence 3579999999998 5599999999999999999999 9999999999999999999999889999999998 466777
Q ss_pred HHhcCccccCCCCCcceeEEecC---chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+|+++. +++|+++.|. ...+.+.||+ ..+|++||||++|+|++.+.
T Consensus 79 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 79 KAIEED-------KSYWNQVLLQKDDVKDVLESYCI------VGFPHIILVDPEGKIVAKEL 127 (152)
T ss_dssp HHHHHH-------TCCSEEEEECHHHHHHHHHHTTC------CSSCEEEEECTTSEEEEECC
T ss_pred HHHHHh-------CCCCeEEecccchhHHHHHHhCC------CcCCeEEEECCCCeEEEeeC
Confidence 787765 7899999999 6899999999 68899999999999999764
No 101
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.89 E-value=9.4e-24 Score=188.84 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=108.3
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCe-EEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC----
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV---- 122 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~-vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~---- 122 (384)
...+++|+++|+|++++. +|++++|++++||+ +||+|| ++|||+|+.++|.|++++++|+++|+++|+|+.
T Consensus 29 ~~~l~~G~~aP~f~l~~~---~G~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~ 104 (218)
T 3u5r_E 29 SNSITLGTRAADFVLPDA---GGNLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQ 104 (218)
T ss_dssp CCCCCTTCBCCCCCEECT---TCCEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTT
T ss_pred CCcCCCCCcCCCcEeECC---CCCEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccc
Confidence 456889999999999877 99999999999995 999999 899999999999999999999999999999999
Q ss_pred ----CCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 123 ----DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 123 ----d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
|+++..++|.+.. +++||++.|.++++++.||+ ..+|++||||++|+|+
T Consensus 105 ~~~~d~~~~~~~~~~~~-------~~~~~~l~D~~~~~~~~~~v-----------~~~P~~~liD~~G~i~ 157 (218)
T 3u5r_E 105 AFPEETLERVGAEVKAY-------GYGFPYLKDASQSVAKAYGA-----------ACTPDFFLYDRERRLV 157 (218)
T ss_dssp TCGGGSHHHHHHHHHHH-------TCCSCEEECTTCHHHHHHTC-----------CEESEEEEECTTCBEE
T ss_pred ccccCCHHHHHHHHHHh-------CCCccEEECCccHHHHHcCC-----------CCCCeEEEECCCCcEE
Confidence 5677788887753 78999999999999999999 3456889999999997
No 102
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.89 E-value=5.6e-24 Score=177.09 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=100.7
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHh
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFT 127 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~ 127 (384)
..+++|+++|+|++ +. +|++++|++++||++||+|| ++||++|+.++|.|++++++|+++++++++||.|+ .+.
T Consensus 5 ~~l~~G~~~P~f~l-~~---~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~ 79 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LG---NDAKASFHNQLGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESI 79 (143)
T ss_dssp BSSSTTSBCCCCCC---------CCCSCCSSCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHH
T ss_pred cccCCcccCCceEE-cC---CCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHH
Confidence 45789999999999 77 89999999999999999999 99999999999999999999998899999999995 556
Q ss_pred HHhhccCccccCCCCccce-eEEeeCc---chhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 128 HLAWVNTPRKEGGLGKLKI-PLLSDLT---HKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~-p~l~D~~---~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
.++|.+. + +++| +++.|.. .++++.||+. ..|++||||++|+|+...
T Consensus 80 ~~~~~~~---~----~~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 80 FTETVKI---D----KLDLSTQFHEGLGKESELYKKYDLR-----------KGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHHHHH---H----TCCGGGEEECTTGGGSHHHHHTTGG-----------GCCCEEEECTTSBEEEES
T ss_pred HHHHHHH---h----CCCCceeeecccccchHHHHHcCCC-----------CCCcEEEECCCCEEEEcc
Confidence 6677664 3 7899 8899885 5799999982 235678999999998643
No 103
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=3.5e-23 Score=173.64 Aligned_cols=121 Identities=13% Similarity=0.210 Sum_probs=106.8
Q ss_pred cccCCCCCCccEEEeeecCccceEEcc--ccCCCeEEEEEeeCCCCCC--chHHHHHHHHhHHHH-HhCCcEEEEEeCCC
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLS--DYYGKYLVFFFYPLDFTFV--CPTEILAFNDRLEEF-HQINTEVVAASVDS 124 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~--~~~gk~vvl~f~~~~~cp~--C~~~~~~l~~~~~~~-~~~~v~vi~Vs~d~ 124 (384)
.+++|+++|+|++++. +|++++|+ +++||++||+|| ++|||+ |+.++|.|++++++| +++++++++|+.|+
T Consensus 4 ~l~~G~~~p~f~l~~~---~g~~~~l~~~~~~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~ 79 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNA---KGEKITRSSDAFKQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV 79 (150)
T ss_dssp TTSTTSBCCCCCEEBT---TCCEECTTSTTTTTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS
T ss_pred cccCCCcCCccEeECC---CCCEEecchhhhCCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC
Confidence 5679999999999887 99999999 999999999999 899999 999999999999999 88899999999996
Q ss_pred -HHhHHhhccCccccCCCCccceeEEeeC---cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 125 -HFTHLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 125 -~~~~~~~~~~~~~~~~~~~~~~p~l~D~---~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
++..++|.+. + +++||++.|. ++++++.||+. ..|++|+||++|+|+...
T Consensus 80 ~~~~~~~~~~~---~----~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 80 DKQQWKDAIKR---D----TLDWEQVCDFGGLNSEVAKQYSIY-----------KIPANILLSSDGKILAKN 133 (150)
T ss_dssp CHHHHHHHHHH---T----TCCSEEECCSCGGGCHHHHHTTCC-----------SSSEEEEECTTSBEEEES
T ss_pred CHHHHHHHHHH---h----CCCceEEEcCcccchHHHHHcCCC-----------ccCeEEEECCCCEEEEcc
Confidence 4667777764 3 8899999998 57999999982 235789999999998654
No 104
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.89 E-value=1.6e-22 Score=169.99 Aligned_cols=122 Identities=17% Similarity=0.224 Sum_probs=112.2
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC--HHhH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS--HFTH 318 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~--~~~~ 318 (384)
+.+|+.+|+|+++ |.+|+.+++++++||++||+|| ++||+.|..+++.|+++++++++.++.+++|+.|. ++..
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 77 (154)
T 3kcm_A 2 SLEENPAPDFTLN---TLNGEVVKLSDLKGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAV 77 (154)
T ss_dssp -CTTSBCCCCEEE---CTTSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHH
T ss_pred CCCCCCCCCeEEE---cCCCCEEehhhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHH
Confidence 3689999999998 5599999999999999999999 99999999999999999999998899999999986 6778
Q ss_pred HHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|.+.+ +++|+++.|.++.+.+.||+ ..+|++||||++|+|++.+..
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 125 (154)
T 3kcm_A 78 EEFFRKT-------GFTLPVLLDADKRVGKLYGT------TGVPETFVIDRHGVILKKVVG 125 (154)
T ss_dssp HHHHHHH-------CCCCCEEECTTCHHHHHHTC------CSBCEEEEECTTSBEEEEEES
T ss_pred HHHHHHc-------CCCeeEEecCchHHHHHhCC------CCCCeEEEECCCCcEEEEEcC
Confidence 8888876 88999999999999999999 689999999999999997764
No 105
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.89 E-value=5.6e-23 Score=176.53 Aligned_cols=137 Identities=12% Similarity=0.137 Sum_probs=113.0
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCC-CchHHHHHHHHhHHHHHhCC--cEEEEEeCC--
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQIN--TEVVAASVD-- 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp-~C~~~~~~l~~~~~~~~~~~--v~vi~Vs~d-- 123 (384)
..+.+|+++|+|++.+. +|++++|++++||++||+|| ++||| +|+.+++.|.++++++++.+ +++|+||.|
T Consensus 5 ~~l~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~ 80 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQ---DGKNVSLESLKGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPE 80 (174)
T ss_dssp CCSCCCEECCCCEEECT---TSCEEETGGGTTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred CcCccccccCCcEEEcC---CCCEEehhhcCCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCC
Confidence 35679999999999877 99999999999999999999 99999 99999999999999999876 999999997
Q ss_pred --CHHhHHhhccCccccCCCCccce---eEEeeCcchhHHhhcC-----cccCCCCcccceeEEEEEEEecCCCcccccc
Q psy17178 124 --SHFTHLAWVNTPRKEGGLGKLKI---PLLSDLTHKISLDYGV-----YLSDQGPVRGSLLSTAIFVYALTSPVNGYAG 193 (384)
Q Consensus 124 --~~~~~~~~~~~~~~~~~~~~~~~---p~l~D~~~~~~~~ygv-----~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~ 193 (384)
+++.+++|.+.+ +++| +++.|.++++++.|++ .+.......++...+++||||++|+|+....
T Consensus 81 ~d~~~~~~~~~~~~-------~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~ 153 (174)
T 1xzo_A 81 NDKPKQLKKFAANY-------PLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYN 153 (174)
T ss_dssp TCCHHHHHHHHTTS-------CCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEE
T ss_pred CCCHHHHHHHHHHc-------CCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEc
Confidence 467788888754 6677 9999988888887765 1211111234455678999999999998776
Q ss_pred eee
Q psy17178 194 GAL 196 (384)
Q Consensus 194 g~~ 196 (384)
|..
T Consensus 154 g~~ 156 (174)
T 1xzo_A 154 GVE 156 (174)
T ss_dssp SSS
T ss_pred CCC
Confidence 654
No 106
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.89 E-value=4e-23 Score=174.84 Aligned_cols=121 Identities=12% Similarity=0.040 Sum_probs=110.3
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHh-HHHHHHHHHHHHhCCcEEEEEeC-------CC
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTEVVAASV-------DS 314 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~-~~~l~~l~~~~~~~~v~vv~Is~-------d~ 314 (384)
.|.++|+|++.++ .+|+.+++++++||++||+|| ++||++|..+ +|.|++++++|+++++.+++|+. |+
T Consensus 5 ~g~~~p~~~~~~~--~~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 81 (160)
T 3lor_A 5 DNAPLLELDVQEW--VNHEGLSNEDLRGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMT 81 (160)
T ss_dssp TTCCBCCCCEEEE--SSSCCCCHHHHTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCcccccc--cCCCccCHHHhCCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCC
Confidence 5789999999851 388999999999999999999 8999999996 99999999999988999999997 67
Q ss_pred HHhHHHHhcCccccCCCCCcceeEEecCchH------HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK------ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++..++|++++ +++||++.|.++. +++.||+ ...|++||||++|+|++.+..
T Consensus 82 ~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 139 (160)
T 3lor_A 82 PEALKVFIDEF-------GIKFPVAVDMPREGQRIPSTMKKYRL------EGTPSIILADRKGRIRQVQFG 139 (160)
T ss_dssp HHHHHHHHHHT-------TCCSCEEEECCCTTCSSCHHHHHTTC------CSSSEEEEECTTSBEEEEEES
T ss_pred HHHHHHHHHHc-------CCCCcEEECCccccchhhhHHHhccc------CccceEEEECCCCcEEEEecC
Confidence 88899998876 8899999999987 9999999 689999999999999997764
No 107
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.89 E-value=4.7e-23 Score=173.62 Aligned_cols=122 Identities=14% Similarity=0.081 Sum_probs=105.4
Q ss_pred ccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCH-HhHH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSH-FTHL 129 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~-~~~~ 129 (384)
...|+++|+|++.+. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|+++++|+.|+. +..+
T Consensus 9 ~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~ 84 (152)
T 2lrt_A 9 KIKEASIIDIQLKDL---KGNTRSLTDLKGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWK 84 (152)
T ss_dssp SSCTTCSCCCCEEBT---TSCEECTTTGGGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHH
T ss_pred hccCCCCCCeEEEcC---CCCEEeHHHhCCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHH
Confidence 358999999999877 99999999999999999999 799999999999999999999988999999999874 3344
Q ss_pred hhccCccccCCCCccceeEEeeCcch---hHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 130 AWVNTPRKEGGLGKLKIPLLSDLTHK---ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~p~l~D~~~~---~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++.+ .++||++.|.++. +++.||+. ..|++||||++|+|+....|..
T Consensus 85 ~~~~---------~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 134 (152)
T 2lrt_A 85 TSAD---------NLPWVCVRDANGAYSSYISLYNVT-----------NLPSVFLVNRNNELSARGENIK 134 (152)
T ss_dssp HHHT---------TCSSEEEECSSGGGCHHHHHHTCC-----------SCSEEEEEETTTEEEEETTTCS
T ss_pred HHHh---------CCCceEEECCCCcchHHHHHcCcc-----------cCceEEEECCCCeEEEecCCHH
Confidence 4543 4689999999986 99999982 2457899999999998776654
No 108
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.88 E-value=6e-23 Score=172.61 Aligned_cols=121 Identities=15% Similarity=0.148 Sum_probs=106.1
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~ 128 (384)
.+.+|+++|+|++.+. +|+++++++++||++||+|| ++|||+|+.++|.|++++++++++++++++|+.|. .+..
T Consensus 2 ~l~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 77 (152)
T 2lrn_A 2 SLATGSVAPAITGIDL---KGNSVSLNDFKGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDW 77 (152)
T ss_dssp CSCTTEECCCCEEECS---SSCEEESGGGTTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHH
T ss_pred CccCCCcCCCceeEcC---CCCEEeHHHcCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 4679999999999877 99999999999999999999 99999999999999999999998899999999985 5666
Q ss_pred HhhccCccccCCCCccceeEEeeC---cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~---~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
++|.+. + +++||++.|. ..++++.||+. ..|++++||++|+|+...
T Consensus 78 ~~~~~~---~----~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 78 KKAIEE---D----KSYWNQVLLQKDDVKDVLESYCIV-----------GFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HHHHHH---H----TCCSEEEEECHHHHHHHHHHTTCC-----------SSCEEEEECTTSEEEEEC
T ss_pred HHHHHH---h----CCCCeEEecccchhHHHHHHhCCC-----------cCCeEEEECCCCeEEEee
Confidence 666663 3 7899999999 68899999982 245789999999997543
No 109
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.88 E-value=1.3e-22 Score=169.05 Aligned_cols=121 Identities=19% Similarity=0.166 Sum_probs=111.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~~ 319 (384)
..+|+.+|+|++. |.+|+.+++++++||++||+|| ++||++|..++|.|++++++++++++.+++|+.| +++..+
T Consensus 5 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~ 80 (148)
T 3hcz_A 5 LLLGKKAPNLYMT---DTTGTYRYLYDVQAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWL 80 (148)
T ss_dssp CCTTSBCCCCCCB---CTTSCBCCGGGCCCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHH
T ss_pred cCCCCcCCceEEe---cCCCCEEEhHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHH
Confidence 4689999999998 5599999999999999999999 9999999999999999999999889999999998 567888
Q ss_pred HHhcCccccCCCCCcc-eeEEecCchH--HHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 320 AWVNTPRKEGGLGKLK-IPLLSDLTHK--ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~D~~~~--~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+|.+++ +++ |+++.|.++. +.+.||+ ..+|+++|||++|+|++.+.
T Consensus 81 ~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~i------~~~P~~~lid~~G~i~~~~~ 129 (148)
T 3hcz_A 81 KFIRSK-------KIGGWLNVRDSKNHTDFKITYDI------YATPVLYVLDKNKVIIAKRI 129 (148)
T ss_dssp HHHHHH-------TCTTSEEEECTTCCCCHHHHHCC------CSSCEEEEECTTCBEEEESC
T ss_pred HHHHHc-------CCCCceEEeccccchhHHHhcCc------CCCCEEEEECCCCcEEEecC
Confidence 888876 677 9999999988 9999999 68999999999999998664
No 110
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.88 E-value=4.9e-22 Score=166.65 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=111.8
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~~ 319 (384)
..+|+.+|+|+++ | +|+.+++++++||++||+|| ++||+.|..+++.|++++++++++++.+++|+.| +++..+
T Consensus 3 l~~G~~~P~f~l~---~-~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~ 77 (152)
T 3gl3_A 3 LDKGDKAPDFALP---G-KTGVVKLSDKTGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAM 77 (152)
T ss_dssp CCTTSBCCCCEEE---B-SSSEEEGGGGTTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHH
T ss_pred CCCCCcCCceEee---C-CCCeEeHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHH
Confidence 4689999999998 7 89999999999999999999 9999999999999999999999999999999998 567778
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|.+++ +++|+++.|.++.+.+.||+ ..+|++||||++|+|++.+..
T Consensus 78 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 124 (152)
T 3gl3_A 78 KFLAQV-------PAEFTVAFDPKGQTPRLYGV------KGMPTSFLIDRNGKVLLQHVG 124 (152)
T ss_dssp HHHHHS-------CCCSEEEECTTCHHHHHTTC------CSSSEEEEECTTSBEEEEEES
T ss_pred HHHHHc-------CCCCceeECCcchhHHHcCC------CCCCeEEEECCCCCEEEEEcc
Confidence 888876 88999999999999999999 689999999999999998774
No 111
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.88 E-value=1.5e-22 Score=171.42 Aligned_cols=122 Identities=18% Similarity=0.235 Sum_probs=110.1
Q ss_pred cCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 239 AIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 239 ~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+.+|+.+|+|++. |.+|+.+++++++||++||+|| ++||+.|..+++.|+++++++++.++.+++|+.|+ ..
T Consensus 13 ~~~~~G~~~p~f~l~---~~~g~~~~l~~~~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~ 86 (158)
T 3hdc_A 13 PLVRTGALAPNFKLP---TLSGENKSLAQYRGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RF 86 (158)
T ss_dssp CCCCTTSBCCCCEEE---CTTSCEEESGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SC
T ss_pred cccCCCCcCCCceeE---cCCCCEEehHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HH
Confidence 345689999999998 5599999999999999999999 99999999999999999999988899999999987 45
Q ss_pred HHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|.+.. +++|+++.|.++.+.+.||+ ..+|++||||++|+|++.+..
T Consensus 87 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~G 134 (158)
T 3hdc_A 87 PEKYRRA-------PVSFNFLSDATGQVQQRYGA------NRLPDTFIVDRKGIIRQRVTG 134 (158)
T ss_dssp CGGGGGC-------CCSCEEEECTTSHHHHHTTC------CSSSEEEEECTTSBEEEEEES
T ss_pred HHHHHHc-------CCCceEEECchHHHHHHhCC------CCcceEEEEcCCCCEEEEEeC
Confidence 5666654 78999999999999999999 689999999999999997764
No 112
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.88 E-value=2.9e-22 Score=174.60 Aligned_cols=119 Identities=15% Similarity=0.104 Sum_probs=109.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC-------
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV------- 312 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~------- 312 (384)
...+|+.+|+|+++ |.+|+.+++++++||++||+|| ++||++|..+++.|++++++++++ +.+++|+.
T Consensus 6 ~~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~ 80 (188)
T 2cvb_A 6 ELPLESPLIDAELP---DPRGGRYRLSQFHEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYP 80 (188)
T ss_dssp CCCTTCBCCCCEEE---CTTSCEEEGGGCCSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCG
T ss_pred cCCCCCCCCCceee---cCCCCEEeHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccc
Confidence 34689999999998 5599999999999999999999 999999999999999999999887 99999998
Q ss_pred -CCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEE
Q psy17178 313 -DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 313 -d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
|+.+.+++|++++ +++|+++.|.++.+++.||+ ...|++||||++|+|++.
T Consensus 81 ~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 81 EDAPEKMAAFAEEH-------GIFFPYLLDETQEVAKAYRA------LRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECSSSHHHHHTTC------CEESEEEEECTTCBEEEE
T ss_pred ccCHHHHHHHHHHh-------CCCceEEECCcchHHHHcCC------CCCCeEEEECCCCcEEEE
Confidence 5677888888876 78999999999999999999 688999999999999986
No 113
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.88 E-value=3.7e-22 Score=173.18 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=111.7
Q ss_pred CCCCCCCCCceeeeEEcC--cceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCc------EEEEEeC
Q psy17178 241 PFVSKPAPFWQGTAVVDG--QLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINT------EVVAASV 312 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~--~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v------~vv~Is~ 312 (384)
+..|+.+|+|+++ |. +|+++++++++||++||+|| ++||++|+.++|.|++++++|+++++ .|++|+.
T Consensus 31 ~~~g~~~p~f~l~---~~~~~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~ 106 (183)
T 3lwa_A 31 EADRQQLPDIGGD---SLMEEGTQINLSDFENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV 106 (183)
T ss_dssp GGGCCCCCCCEEE---BSSSTTCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC
T ss_pred cccCCCCCceecc---ccccCCcEecHHHhCCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC
Confidence 4578999999998 66 89999999999999999999 99999999999999999999999989 9999999
Q ss_pred CC--HHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 313 DS--HFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 313 d~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
|+ ++..++|++++ +++|+++.|.++.+.+.|+.+.. ..+|++||||++|+|++.+..
T Consensus 107 d~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g 165 (183)
T 3lwa_A 107 RDYSRDIAQDFVTDN-------GLDYPSIYDPPFMTAASLGGVPA---SVIPTTIVLDKQHRPAAVFLR 165 (183)
T ss_dssp SCCCHHHHHHHHHHT-------TCCSCEEECTTCGGGGGTTTCCT---TCCSEEEEECTTSCEEEEECS
T ss_pred CCCCHHHHHHHHHHc-------CCCccEEECCcchHHHHhccCCC---CCCCeEEEECCCCcEEEEEcC
Confidence 87 78888998876 89999999999999999974221 578999999999999997764
No 114
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.88 E-value=5.3e-23 Score=178.72 Aligned_cols=138 Identities=9% Similarity=0.003 Sum_probs=108.5
Q ss_pred ccccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC---
Q psy17178 47 TFYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD--- 123 (384)
Q Consensus 47 ~~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d--- 123 (384)
...++++|+++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++++++++|+.|
T Consensus 17 ~~~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 92 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDI---DGHMVNLDKYRGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFG 92 (183)
T ss_dssp --CCGGGCCSGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCST
T ss_pred cccCCcccCcccceEEEcC---CCCEeeHHHcCCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCC
Confidence 3456789999999999877 99999999999999999999 9999999999999999999999989999999986
Q ss_pred -----CHHhHHhhccCccccCCCCccceeEEe--eCcchhHH-hhcCcccCC---CCccc--ceeEEEEEEEecCCCccc
Q psy17178 124 -----SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-DYGVYLSDQ---GPVRG--SLLSTAIFVYALTSPVNG 190 (384)
Q Consensus 124 -----~~~~~~~~~~~~~~~~~~~~~~~p~l~--D~~~~~~~-~ygv~~~~~---g~~~g--~~~~~~~~vid~~G~v~~ 190 (384)
+++..++|.+.+ +++||++. |.++..+. .|+.+.... |. .+ +...|++||||++|+|+.
T Consensus 93 ~~e~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~-~~~~i~~~P~~~lid~~G~i~~ 164 (183)
T 2obi_A 93 KQEPGSNEEIKEFAAGY-------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGI-LGNAIKWNFTKFLIDKNGCVVK 164 (183)
T ss_dssp TCCCSCHHHHHHHHHTT-------TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCS-SSSSCCSTTCEEEECTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHc-------CCCceEEeeeccCCcchhHHHHHhhccCCCCCc-ccccccccceEEEECCCCCEEE
Confidence 467778887643 78999997 77766543 454322111 10 11 122367899999999998
Q ss_pred ccceee
Q psy17178 191 YAGGAL 196 (384)
Q Consensus 191 ~~~g~~ 196 (384)
...|..
T Consensus 165 ~~~g~~ 170 (183)
T 2obi_A 165 RYGPME 170 (183)
T ss_dssp EECTTS
T ss_pred EeCCCC
Confidence 776654
No 115
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.88 E-value=2.8e-22 Score=174.33 Aligned_cols=126 Identities=19% Similarity=0.188 Sum_probs=111.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCH--HhH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSH--FTH 318 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~--~~~ 318 (384)
..+|..+|+|+++ |.+|+++++++++||++||+|| ++||++|+.+++.|+++++++++.++.|++|+.|.. +..
T Consensus 34 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~ 109 (186)
T 1jfu_A 34 ASAPLKLPDLAFE---DADGKPKKLSDFRGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKP 109 (186)
T ss_dssp CCSCCBCCCCEEE---CTTSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHH
T ss_pred ccCCCcCCCcEeE---cCCCCEeeHHHcCCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHH
Confidence 4679999999998 5599999999999999999999 999999999999999999999888999999999853 677
Q ss_pred HHHhcCccccCCCCCc-ceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|.+++ ++ .|+++.|+++.+.+.|++.... ...|++||||++|+|++++..
T Consensus 110 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~--~~~P~~~lid~~G~i~~~~~g 162 (186)
T 1jfu_A 110 KTFLKEA-------NLTRLGYFNDQKAKVFQDLKAIGRA--LGMPTSVLVDPQGCEIATIAG 162 (186)
T ss_dssp HHHHHHT-------TCCTTCCEECTTCHHHHHHHTTTCC--SSSSEEEEECTTSBEEEEEES
T ss_pred HHHHHHc-------CCCCCceEECCcchHHHHhcccccc--CCCCEEEEECCCCCEEEEEec
Confidence 8888876 66 5899999999999999984211 368999999999999998763
No 116
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.88 E-value=4.3e-22 Score=167.02 Aligned_cols=120 Identities=22% Similarity=0.266 Sum_probs=110.4
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhHHHH
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTHLAW 321 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~~~~ 321 (384)
+|+.+|+|++. |.+|+.+++++++||++||+|| ++||++|..++|.|++++++++++++.+++|+.| +++..++|
T Consensus 2 ~G~~~p~~~l~---~~~g~~~~l~~~~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~ 77 (151)
T 2f9s_A 2 EGSDAPNFVLE---DTNGKRIELSDLKGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 77 (151)
T ss_dssp CCEECCCCEEE---CTTCCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHH
T ss_pred CCCcCCcceeE---cCCCCEEEHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence 68899999998 5599999999999999999999 9999999999999999999999889999999986 56788888
Q ss_pred hcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 322 VNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++.+ +++|+++.|.++.+.+.||+ ..+|++||||++|+|++.+..
T Consensus 78 ~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~G 122 (151)
T 2f9s_A 78 MKSY-------GVNFPVVLDTDRQVLDAYDV------SPLPTTFLINPEGKVVKVVTG 122 (151)
T ss_dssp HHHH-------TCCSCEEEETTSHHHHHTTC------CSSCEEEEECTTSEEEEEEES
T ss_pred HHHc-------CCCceEEECCchHHHHhcCC------CCCCeEEEECCCCcEEEEEeC
Confidence 8876 78999999999999999999 689999999999999997763
No 117
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.88 E-value=8.3e-23 Score=177.87 Aligned_cols=137 Identities=10% Similarity=0.012 Sum_probs=107.3
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-----
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----- 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----- 123 (384)
..+.+|+++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|+++++|+.|
T Consensus 21 ~~~~~g~~~p~f~l~~~---~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~ 96 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDI---DGHMVNLDKYRGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 96 (185)
T ss_dssp GGGGGCCCGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTC
T ss_pred hhccCCCCcCCceeEcC---CCCEeeHHHcCCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCC
Confidence 45679999999999877 99999999999999999999 9999999999999999999999999999999986
Q ss_pred ---CHHhHHhhccCccccCCCCccceeEEe--eCcchhHH-hhcCcccCC---CCccc--ceeEEEEEEEecCCCccccc
Q psy17178 124 ---SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-DYGVYLSDQ---GPVRG--SLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 124 ---~~~~~~~~~~~~~~~~~~~~~~~p~l~--D~~~~~~~-~ygv~~~~~---g~~~g--~~~~~~~~vid~~G~v~~~~ 192 (384)
+++..++|.+. + +++||++. |.+++.+. .|+.+.... |. .+ +...|++||||++|+|+...
T Consensus 97 ~~~~~~~~~~~~~~---~----~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~-~~~~i~~~P~~~lid~~G~i~~~~ 168 (185)
T 2gs3_A 97 EPGSNEEIKEFAAG---Y----NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGI-LGNAIKWNFTKFLIDKNGCVVKRY 168 (185)
T ss_dssp CCSCHHHHHHHHHH---T----TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCS-SSSSCCSSCCEEEECTTSCEEEEE
T ss_pred CCCCHHHHHHHHHH---c----CCCCeeeeeeccCChhhhHHHHHHHhhcccccc-cCCcccccceEEEECCCCCEEEee
Confidence 35667777764 3 78999997 55665443 454322111 10 11 12246789999999999887
Q ss_pred ceeee
Q psy17178 193 GGALY 197 (384)
Q Consensus 193 ~g~~~ 197 (384)
.|...
T Consensus 169 ~g~~~ 173 (185)
T 2gs3_A 169 GPMEE 173 (185)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 77543
No 118
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.87 E-value=4.7e-23 Score=174.42 Aligned_cols=123 Identities=12% Similarity=0.143 Sum_probs=108.6
Q ss_pred cCCCCCCccEEEe-eecCccceEEccccCCCeEEEEEeeCCCCCCchHH-HHHHHHhHHHHHhCCcEEEEEeC-------
Q psy17178 52 NLSKPAPFWQGTA-VVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTEVVAASV------- 122 (384)
Q Consensus 52 ~~G~~aP~f~l~~-~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~-~~~l~~~~~~~~~~~v~vi~Vs~------- 122 (384)
..|.++|+|++++ . +|++++|++++||++||+|| ++|||+|..+ +|.|++++++|+++|+.+++|+.
T Consensus 4 ~~g~~~p~~~~~~~~---~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~ 79 (160)
T 3lor_A 4 LDNAPLLELDVQEWV---NHEGLSNEDLRGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDV 79 (160)
T ss_dssp CTTCCBCCCCEEEES---SSCCCCHHHHTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGG
T ss_pred cCCCcCCCccccccc---CCCccCHHHhCCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecccccccc
Confidence 3789999999987 5 78999999999999999999 8899999997 99999999999988999999997
Q ss_pred CCHHhHHhhccCccccCCCCccceeEEeeCcch------hHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 123 DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK------ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 123 d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~------~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|+.+..++|.+.. +++||++.|..+. +++.||+ .+ .|++||||++|+|+....|..
T Consensus 80 ~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~v--------~~---~P~~~lid~~G~i~~~~~g~~ 141 (160)
T 3lor_A 80 MTPEALKVFIDEF-------GIKFPVAVDMPREGQRIPSTMKKYRL--------EG---TPSIILADRKGRIRQVQFGQV 141 (160)
T ss_dssp SCHHHHHHHHHHT-------TCCSCEEEECCCTTCSSCHHHHHTTC--------CS---SSEEEEECTTSBEEEEEESCC
T ss_pred CCHHHHHHHHHHc-------CCCCcEEECCccccchhhhHHHhccc--------Cc---cceEEEECCCCcEEEEecCcC
Confidence 5678888888753 7899999999988 9999998 22 356799999999998777765
No 119
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.87 E-value=4.9e-23 Score=174.04 Aligned_cols=124 Identities=16% Similarity=0.204 Sum_probs=107.0
Q ss_pred CCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHH-HHHHHHhHHHHHhCCcEEEEEeC-------CC
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTEVVAASV-------DS 124 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~-~~~l~~~~~~~~~~~v~vi~Vs~-------d~ 124 (384)
.|+++|+|+++++.+ +|++++|++++||++||+|| ++|||+|+.+ +|.|++++++|++.++.+++|+. |+
T Consensus 2 ~g~~aP~f~l~~~~~-~g~~~~l~~~~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFN-SATDLTLADLRGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEES-CSSCCCTGGGTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhc-CCCccCHHHhCCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 689999999987422 57899999999999999999 8999999997 99999999999988999999996 46
Q ss_pred HHhHHhhccCccccCCCCccceeEEeeCcc-----hhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTH-----KISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~-----~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+..++|.+.. +++||++.|.++ ++++.||+ .+ .|++||||++|+|+....|..
T Consensus 80 ~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~v--------~~---~P~~~lid~~G~i~~~~~g~~ 138 (158)
T 3eyt_A 80 PISLKAFLHEY-------RIKFPVGVDQPGDGAMPRTMAAYQM--------RG---TPSLLLIDKAGDLRAHHFGDV 138 (158)
T ss_dssp HHHHHHHHHHT-------TCCSCEEEECCCSSSSCHHHHHTTC--------CS---SSEEEEECTTSEEEEEEESCC
T ss_pred HHHHHHHHHHc-------CCCceEEEcCccchhhHHHHHHcCC--------CC---CCEEEEECCCCCEEEEEeCCC
Confidence 77788888743 889999999987 79999998 22 356899999999987776654
No 120
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.87 E-value=2e-22 Score=169.34 Aligned_cols=124 Identities=19% Similarity=0.257 Sum_probs=110.0
Q ss_pred ccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC--HHhH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS--HFTH 128 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~--~~~~ 128 (384)
+++|+++|+|++.+. +|+.+++++++||++||+|| ++|||+|+.+++.|.++++++++.++.+++|+.|. .+..
T Consensus 2 ~~~G~~~p~~~l~~~---~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 77 (154)
T 3kcm_A 2 SLEENPAPDFTLNTL---NGEVVKLSDLKGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAV 77 (154)
T ss_dssp -CTTSBCCCCEEECT---TSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHH
T ss_pred CCCCCCCCCeEEEcC---CCCEEehhhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHH
Confidence 469999999999877 99999999999999999999 99999999999999999999998899999999987 6777
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++|.+.. +++||++.|.++.+++.||+. ..|++||||++|+|+....|..
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 127 (154)
T 3kcm_A 78 EEFFRKT-------GFTLPVLLDADKRVGKLYGTT-----------GVPETFVIDRHGVILKKVVGAM 127 (154)
T ss_dssp HHHHHHH-------CCCCCEEECTTCHHHHHHTCC-----------SBCEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHc-------CCCeeEEecCchHHHHHhCCC-----------CCCeEEEECCCCcEEEEEcCCC
Confidence 7787743 789999999999999999982 2457899999999987666654
No 121
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.87 E-value=3.9e-22 Score=172.43 Aligned_cols=130 Identities=13% Similarity=0.200 Sum_probs=113.0
Q ss_pred CCCCCCCCceeeeEEcC---------cc----eeeeccc-cCCCeEEEEEEeCCCCcCch-HhHHHHHHHHHHH-HhCCc
Q psy17178 242 FVSKPAPFWQGTAVVDG---------QL----KEIKLSD-YYGKYLVFFFYPLDFTFVCP-TEILAFNDRLEEF-HQINT 305 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~---------~g----~~~~l~d-~~Gk~vvl~F~~a~~c~~C~-~~~~~l~~l~~~~-~~~~v 305 (384)
.+|+.+|+|++++. .+ +| +.+++++ ++||++||+|||+.|||.|. .|++.+++.++++ ++.|+
T Consensus 2 ~vGd~aPdf~l~~~-~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 2 KENDLIPNVKVMID-VRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CTTCBCCCCEEEEE-HHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCeEEEcc-cccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999853 12 56 7999999 69999999999999999999 9999999999999 99999
Q ss_pred E-EEEEeCCCHHhHHHHhcCccccCCCCCc-ceeEEecCchHHHHHhCceecCC--C---ceeeEEEEEeCCceEEEEEe
Q psy17178 306 E-VVAASVDSHFTHLAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQ--G---HTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 306 ~-vv~Is~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~~--~---~~~p~~~lId~~G~i~~~~~ 378 (384)
. |++||.|++..+++|.+.. +. +|++++|++++++++||+..... | ...+.+|||| +|+|++++.
T Consensus 81 ~~V~gvS~D~~~~~~~~~~~~-------~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v 152 (182)
T 1xiy_A 81 DDIYCITNNDIYVLKSWFKSM-------DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQ 152 (182)
T ss_dssp SEEEEEESSCHHHHHHHHHHT-------TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred cEEEEEeCCCHHHHHHHHHHc-------CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEE
Confidence 5 9999999999999999876 56 69999999999999999975432 2 2578899999 999999987
Q ss_pred cC
Q psy17178 379 RG 380 (384)
Q Consensus 379 ~~ 380 (384)
..
T Consensus 153 ~~ 154 (182)
T 1xiy_A 153 EK 154 (182)
T ss_dssp CS
T ss_pred eC
Confidence 54
No 122
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.87 E-value=2.8e-21 Score=165.97 Aligned_cols=130 Identities=16% Similarity=0.125 Sum_probs=103.1
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCc-CchHhHHHHHHHHHHHHhC--CcEEEEEeCC----C
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQI--NTEVVAASVD----S 314 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~-~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d----~ 314 (384)
.+|.++|+|+|+ |++|+++++++++||++||+|| .+||| +|+.+++.|.++++.+++. ++++|+||+| +
T Consensus 7 P~~~~~PdF~L~---d~~G~~v~l~d~~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt 82 (170)
T 4hde_A 7 PLNWDLETFQFT---NQDGKPFGTKDLKGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK 82 (170)
T ss_dssp CCCBCCCCCEEE---CTTSCEEEHHHHTTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred CCCCcCCCcEEE---CCCCCEEeHHHhCCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc
Confidence 478999999998 7799999999999999999999 88886 8999999999999999764 4899999975 5
Q ss_pred HHhHHHHhcCccccCCCCCcceeEEecCch-HH----HHHhCceecCC--C--ceeeEEEEEeCCceEEEEEec
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTH-KI----SLDYGVYLSDQ--G--HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~----~~~~gv~~~~~--~--~~~p~~~lId~~G~i~~~~~~ 379 (384)
++.+++|++.+... ...|..+.+.+. .+ ...|+...... + .|.|++||||++|+|+.+|..
T Consensus 83 p~~l~~y~~~~~~~----~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g 152 (170)
T 4hde_A 83 PENLKAFIQKFTED----TSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSG 152 (170)
T ss_dssp HHHHHHHHTTTCSC----CTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEES
T ss_pred HHHHHHHHHHcCCC----CCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECC
Confidence 78889998876333 456777776542 22 23455543221 1 467899999999999998864
No 123
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.87 E-value=1.1e-22 Score=173.82 Aligned_cols=136 Identities=7% Similarity=-0.032 Sum_probs=103.4
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC------
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------ 123 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d------ 123 (384)
.+++|+++|+|++++. +|+++++++++||++||+|| ++|||+|+.++|.|++++++|+++|+++++|+.|
T Consensus 4 ~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 79 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDI---NGVDVSLEKYRGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQE 79 (169)
T ss_dssp ---CCCSGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccCCcccccceeecC---CCCCccHHHcCCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCC
Confidence 3579999999999877 99999999999999999999 8999999999999999999999989999999986
Q ss_pred --CHHhHHhh-ccCccccCCCCccceeEEe--eCcchhHH-hhcCcccCCCCccc--ceeEEEEEEEecCCCccccccee
Q psy17178 124 --SHFTHLAW-VNTPRKEGGLGKLKIPLLS--DLTHKISL-DYGVYLSDQGPVRG--SLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 124 --~~~~~~~~-~~~~~~~~~~~~~~~p~l~--D~~~~~~~-~ygv~~~~~g~~~g--~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+++.+++| .+. + +++||++. |.++..+. .|+..........+ +...|++||||++|+|+....|.
T Consensus 80 ~~~~~~~~~~~~~~---~----~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 152 (169)
T 2v1m_A 80 PWAEAEIKKFVTEK---Y----GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPT 152 (169)
T ss_dssp CSCHHHHHHHHHHH---H----CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTT
T ss_pred CCCHHHHHHHHHHh---c----CCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCC
Confidence 35667777 353 3 78999996 77776543 34221111000011 12235789999999999877665
Q ss_pred e
Q psy17178 196 L 196 (384)
Q Consensus 196 ~ 196 (384)
.
T Consensus 153 ~ 153 (169)
T 2v1m_A 153 T 153 (169)
T ss_dssp S
T ss_pred C
Confidence 4
No 124
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.87 E-value=4.1e-22 Score=173.10 Aligned_cols=130 Identities=10% Similarity=-0.019 Sum_probs=106.2
Q ss_pred ccCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC----
Q psy17178 238 RAIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD---- 313 (384)
Q Consensus 238 ~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d---- 313 (384)
...+.+|+.+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++|++|+.|
T Consensus 18 ~~~~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 93 (183)
T 2obi_A 18 RDDWRCARSMHEFSAK---DIDGHMVNLDKYRGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGK 93 (183)
T ss_dssp -CCGGGCCSGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTT
T ss_pred ccCCcccCcccceEEE---cCCCCEeeHHHcCCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCC
Confidence 3445789999999998 5599999999999999999999 9999999999999999999999989999999975
Q ss_pred ----CHHhHHHHhcCccccCCCCCcceeEEe--cCchHHHH-Hh----------CceecCCCceeeEEEEEeCCceEEEE
Q psy17178 314 ----SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-DY----------GVYLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 314 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~----------gv~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
+++.+++|++++ +++||++. |.++.... .| |+.... -.+.|++||||++|+|+++
T Consensus 94 ~e~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~-i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 94 QEPGSNEEIKEFAAGY-------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNA-IKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp CCCSCHHHHHHHHHTT-------TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSS-CCSTTCEEEECTTSCEEEE
T ss_pred CCCCCHHHHHHHHHHc-------CCCceEEeeeccCCcchhHHHHHhhccCCCCCccccc-ccccceEEEECCCCCEEEE
Confidence 567888888876 88999997 66654332 33 331100 0246899999999999998
Q ss_pred Eec
Q psy17178 377 FER 379 (384)
Q Consensus 377 ~~~ 379 (384)
+..
T Consensus 166 ~~g 168 (183)
T 2obi_A 166 YGP 168 (183)
T ss_dssp ECT
T ss_pred eCC
Confidence 763
No 125
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.87 E-value=5.1e-22 Score=165.38 Aligned_cols=121 Identities=17% Similarity=0.200 Sum_probs=109.7
Q ss_pred CCCCCCCCCceeeeEEcCcceeeecc--ccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHH-HhCCcEEEEEeCCC-HH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLS--DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEF-HQINTEVVAASVDS-HF 316 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~--d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~-~~~~v~vv~Is~d~-~~ 316 (384)
..+|+.+|+|++. +.+|+.++++ +++||++||+|| ++||++|+.++|.|+++++++ +++++.+++|+.|. .+
T Consensus 5 ~~~g~~~p~~~l~---~~~g~~~~l~~~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 80 (148)
T 3fkf_A 5 VTVGKSAPYFSLP---NEKGEKLSRSAERFRNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDRE 80 (148)
T ss_dssp CCTTSBCCCCCEE---BTTSCEECTTSTTTTTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHH
T ss_pred ccCCCcCCCeEee---CCCCCEEeccccccCCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHH
Confidence 4689999999998 4599999999 999999999999 999999999999999999999 87889999999985 55
Q ss_pred hHHHHhcCccccCCCCCcceeEEecC---chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..+++.+.+ +++|+++.|. +..+.+.||+ ..+|+++|||++|+|++.+.
T Consensus 81 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 81 AWETAIKKD-------TLSWDQVCDFTGLSSETAKQYAI------LTLPTNILLSPTGKILARDI 132 (148)
T ss_dssp HHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTC------CSSSEEEEECTTSBEEEESC
T ss_pred HHHHHHHHc-------CCCceEEEccCCcchHHHHhcCC------CCcCEEEEECCCCeEEEecC
Confidence 777887765 8899999998 6799999999 68999999999999998664
No 126
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.87 E-value=3.6e-22 Score=170.46 Aligned_cols=127 Identities=8% Similarity=-0.052 Sum_probs=102.9
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
+.+|+.+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|+++++++++++++|++|+.|
T Consensus 5 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~ 80 (169)
T 2v1m_A 5 HKSWNSIYEFTVK---DINGVDVSLEKYRGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEP 80 (169)
T ss_dssp --CCCSGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred ccCCcccccceee---cCCCCCccHHHcCCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCC
Confidence 3589999999998 5599999999999999999999 8999999999999999999999989999999986
Q ss_pred -CHHhHHHH-hcCccccCCCCCcceeEEe--cCchHHHH-Hh--------CceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 314 -SHFTHLAW-VNTPRKEGGLGKLKIPLLS--DLTHKISL-DY--------GVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 314 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~--------gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++.+++| .+++ +++||++. |.++.... .| |+...+ -.+.|++||||++|+|++++..
T Consensus 81 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~-i~~~P~~~lid~~G~i~~~~~g 151 (169)
T 2v1m_A 81 WAEAEIKKFVTEKY-------GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNN-IKWNFSKFLVDRQGQPVKRYSP 151 (169)
T ss_dssp SCHHHHHHHHHHHH-------CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCS-CCSTTCEEEECTTSCEEEEECT
T ss_pred CCHHHHHHHHHHhc-------CCCCceEEEEeecCccccHHHHHHHhhcCCccCCc-ccccceEEEECCCCCEEEEcCC
Confidence 35678888 4765 78999996 66655432 23 442110 0346899999999999998763
No 127
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.87 E-value=4.4e-22 Score=166.94 Aligned_cols=124 Identities=18% Similarity=0.159 Sum_probs=108.7
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~ 128 (384)
++++|+++|+|++.+ +|+++++++++||++||+|| ++|||+|+.+++.|.++++++++.|+.+++|+.|. .+..
T Consensus 2 ~l~~G~~~P~f~l~~----~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 76 (152)
T 3gl3_A 2 SLDKGDKAPDFALPG----KTGVVKLSDKTGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDA 76 (152)
T ss_dssp CCCTTSBCCCCEEEB----SSSEEEGGGGTTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHH
T ss_pred CCCCCCcCCceEeeC----CCCeEeHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHH
Confidence 478999999999854 78899999999999999999 99999999999999999999999999999999985 6667
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++|.+.. +++||++.|.++++++.||+. ..|++|+||++|+|+....|..
T Consensus 77 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 126 (152)
T 3gl3_A 77 MKFLAQV-------PAEFTVAFDPKGQTPRLYGVK-----------GMPTSFLIDRNGKVLLQHVGFR 126 (152)
T ss_dssp HHHHHHS-------CCCSEEEECTTCHHHHHTTCC-----------SSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHc-------CCCCceeECCcchhHHHcCCC-----------CCCeEEEECCCCCEEEEEccCC
Confidence 7777643 789999999999999999992 2357899999999987666643
No 128
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.87 E-value=2.1e-22 Score=170.51 Aligned_cols=125 Identities=17% Similarity=0.248 Sum_probs=110.6
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHh
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFT 127 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~ 127 (384)
...+.+|+++|+|++.+. +|+.+++++++||++||+|| ++|||+|+.+++.|+++++++++.++.+++|+.|+ .
T Consensus 12 ~~~~~~G~~~p~f~l~~~---~g~~~~l~~~~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~ 85 (158)
T 3hdc_A 12 APLVRTGALAPNFKLPTL---SGENKSLAQYRGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--R 85 (158)
T ss_dssp SCCCCTTSBCCCCEEECT---TSCEEESGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--S
T ss_pred CcccCCCCcCCCceeEcC---CCCEEehHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--H
Confidence 445779999999999877 99999999999999999999 99999999999999999999988899999999998 4
Q ss_pred HHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 128 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.++|.+. + +++||++.|.++++++.||+. ..|++||||++|+|+....|..
T Consensus 86 ~~~~~~~---~----~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~G~~ 136 (158)
T 3hdc_A 86 FPEKYRR---A----PVSFNFLSDATGQVQQRYGAN-----------RLPDTFIVDRKGIIRQRVTGGI 136 (158)
T ss_dssp CCGGGGG---C----CCSCEEEECTTSHHHHHTTCC-----------SSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHH---c----CCCceEEECchHHHHHHhCCC-----------CcceEEEEcCCCCEEEEEeCCC
Confidence 5556653 3 789999999999999999992 2357899999999998887775
No 129
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.87 E-value=4e-22 Score=173.51 Aligned_cols=127 Identities=9% Similarity=-0.016 Sum_probs=103.2
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
+.+|+.+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|+++++++++++++|++|+.|
T Consensus 23 ~~~g~~~p~f~l~---~~~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~ 98 (185)
T 2gs3_A 23 MRCARSMHEFSAK---DIDGHMVNLDKYRGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 98 (185)
T ss_dssp GGGCCCGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred ccCCCCcCCceeE---cCCCCEeeHHHcCCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCC
Confidence 4589999999998 5599999999999999999999 9999999999999999999999999999999976
Q ss_pred -CHHhHHHHhcCccccCCCCCcceeEEe--cCchHHHH-Hh----------CceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 314 -SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-DY----------GVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~----------gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++.+++|++++ +++||++. |.++.... .| |+... .-...|++||||++|+|++++..
T Consensus 99 ~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~-~i~~~P~~~lid~~G~i~~~~~g 170 (185)
T 2gs3_A 99 GSNEEIKEFAAGY-------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGN-AIKWNFTKFLIDKNGCVVKRYGP 170 (185)
T ss_dssp SCHHHHHHHHHHT-------TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSS-SCCSSCCEEEECTTSCEEEEECT
T ss_pred CCHHHHHHHHHHc-------CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCC-cccccceEEEECCCCCEEEeeCC
Confidence 356788888766 88999997 44443322 33 32110 00236899999999999998763
No 130
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.87 E-value=1.1e-22 Score=169.42 Aligned_cols=123 Identities=20% Similarity=0.228 Sum_probs=108.4
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-CHHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d-~~~~~ 128 (384)
.+.+|+++|+|++.+. +|+++++++++||++||+|| ++|||+|+.++|.|+++++++++.++.+++|+.| +.+..
T Consensus 4 ~~~~G~~~p~~~l~~~---~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 79 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDT---TGTYRYLYDVQAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEW 79 (148)
T ss_dssp CCCTTSBCCCCCCBCT---TSCBCCGGGCCCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHH
T ss_pred ccCCCCcCCceEEecC---CCCEEEhHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHH
Confidence 4679999999999777 99999999999999999999 9999999999999999999999889999999998 46677
Q ss_pred HhhccCccccCCCCccc-eeEEeeCcch--hHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 129 LAWVNTPRKEGGLGKLK-IPLLSDLTHK--ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~-~p~l~D~~~~--~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++|.+.. +++ ||++.|.++. +++.||+. ..|+++++|++|+|+....|
T Consensus 80 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~i~-----------~~P~~~lid~~G~i~~~~~g 130 (148)
T 3hcz_A 80 LKFIRSK-------KIGGWLNVRDSKNHTDFKITYDIY-----------ATPVLYVLDKNKVIIAKRIG 130 (148)
T ss_dssp HHHHHHH-------TCTTSEEEECTTCCCCHHHHHCCC-----------SSCEEEEECTTCBEEEESCC
T ss_pred HHHHHHc-------CCCCceEEeccccchhHHHhcCcC-----------CCCEEEEECCCCcEEEecCC
Confidence 7787743 677 9999999988 99999982 24578999999999866544
No 131
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.87 E-value=9.5e-22 Score=165.06 Aligned_cols=122 Identities=19% Similarity=0.211 Sum_probs=110.8
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC--CCHHhH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV--DSHFTH 318 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~--d~~~~~ 318 (384)
+.+|+.+|+|+++ |.+|+.+++++++||++||+|| ++||+.|..+++.|+++++++++.++.+++|+. |+.+..
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 77 (153)
T 2l5o_A 2 SLDSKTAPAFSLP---DLHGKTVSNADLQGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESV 77 (153)
T ss_dssp --CCTTCCSCEEE---CTTSCEEEHHHHTTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHH
T ss_pred CCCCCCCCCcEee---cCCCCCccHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHH
Confidence 3579999999998 5599999999999999999999 999999999999999999999988999999994 678888
Q ss_pred HHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|++++ +++|+++.|.+..+.+.||+ ..+|+++|||++|+|++.+..
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~i------~~~P~~~lid~~G~i~~~~~g 125 (153)
T 2l5o_A 78 RQYVKDY-------GLPFTVMYDADKAVGQAFGT------QVYPTSVLIGKKGEILKTYVG 125 (153)
T ss_dssp HHHHHHT-------TCCSEEEECSSCHHHHHHTC------CSSSEEEEECSSSCCCEEEES
T ss_pred HHHHHHc-------CCCceEEcCchHHHHHHcCC------CccCeEEEECCCCcEEEEEcC
Confidence 9998876 88999999999999999999 678999999999999987763
No 132
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.87 E-value=2.4e-22 Score=172.58 Aligned_cols=134 Identities=11% Similarity=0.073 Sum_probs=105.3
Q ss_pred cCCCCCC-ccEEEeeecCccceEEccccCCCeEEEEEeeCCCCC-CchHHHHHHHHhHHHHHh--CCcEEEEEeCC---C
Q psy17178 52 NLSKPAP-FWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQ--INTEVVAASVD---S 124 (384)
Q Consensus 52 ~~G~~aP-~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp-~C~~~~~~l~~~~~~~~~--~~v~vi~Vs~d---~ 124 (384)
.+|+++| +|++++. +|++++|++++||++||+|| ++||| +|+.+++.|+++++++++ .++++++||.| +
T Consensus 2 ~~G~~~P~~f~l~d~---~G~~v~l~~~~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~ 77 (170)
T 3me7_A 2 SLGTYVPGDITLVDS---YGNEFQLKNLKGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDT 77 (170)
T ss_dssp CTTCBCCTTCEEEET---TCCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCC
T ss_pred CCCCcCCCCeEEEcC---CcCEEchHHhCCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCC
Confidence 5899999 9999877 99999999999999999999 88997 699999999999999975 56999999987 4
Q ss_pred HHhHHhhccCccccCCCCccceeEEe--e--CcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLS--D--LTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~--D--~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++.+++|.+.+ +.....|+++. | ...+++++||+..... ..++..++++||||++|+|+.+..|.
T Consensus 78 ~~~~~~~~~~~----~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 78 LEDIKRFQKEY----GIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA--GNDFIHPNVVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp HHHHHHHHHHT----TCCSSSEEEEEESSHHHHHHHHHHTTCCCEEE--TTEEECCCEEEEECTTSBEEEEEESS
T ss_pred HHHHHHHHHHc----CCCCCCeEEEeCCCHHHHHHHHHHCCeEEecC--CCccccCceEEEECCCCeEEEEEeCC
Confidence 66777777754 11123455543 3 3378999999854431 13445667899999999999776554
No 133
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.87 E-value=6.3e-22 Score=173.43 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=111.4
Q ss_pred CCCCCCCCCCceee-eEEcCcceeeeccccCCCe-EEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC-----
Q psy17178 240 IPFVSKPAPFWQGT-AVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV----- 312 (384)
Q Consensus 240 ~~~~g~~~P~f~l~-~l~d~~g~~~~l~d~~Gk~-vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~----- 312 (384)
...+|+.+|+|+++ ++ +|+.+++++++||+ +||+|| ++||++|+.++|.|++++++|+++++.+++|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~---~G~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~ 92 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVI---DGNVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQ 92 (196)
T ss_dssp CCCTTCBCCCCEEEETT---TCCEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTT
T ss_pred CCCcCCcCCceeeeecC---CCCEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccc
Confidence 35689999999987 55 99999999999985 999999 999999999999999999999988999999998
Q ss_pred ---CCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 313 ---DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 313 ---d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
|+++.+++|++++ +++|+++.|.++.+++.||+ ...|++||||++|+|++.+.
T Consensus 93 ~~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 148 (196)
T 2ywi_A 93 YPEDSPENMKKVAEEL-------GYPFPYLYDETQEVAKAYDA------ACTPDFYIFDRDLKCVYRGQ 148 (196)
T ss_dssp CGGGSHHHHHHHHHHH-------TCCSCEEECSSCHHHHHHTC------CEESEEEEEETTCBEEEEEC
T ss_pred ccccCHHHHHHHHHHc-------CCCceEEECCchHHHHHhCC------CCCCeEEEEcCCCeEEEccc
Confidence 5678888888876 88999999999999999999 68999999999999999753
No 134
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.87 E-value=1.4e-21 Score=165.89 Aligned_cols=123 Identities=17% Similarity=0.196 Sum_probs=103.3
Q ss_pred CCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcC-chHhHHHHHHHHHHHHh----CCcEEEEEeCCC----HH
Q psy17178 246 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ----INTEVVAASVDS----HF 316 (384)
Q Consensus 246 ~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~-C~~~~~~l~~l~~~~~~----~~v~vv~Is~d~----~~ 316 (384)
.+|+|+++ |.+|+++++++++||++||+|| ++||++ |+.++|.|+++++++++ .++++++||.|+ ++
T Consensus 2 ~ap~f~l~---~~~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLT---THTGERKTDKDYLGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 77 (164)
T ss_dssp CCCCCEEE---ETTSCEEEGGGGTTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHH
T ss_pred CCCCeEEE---eCCCCEEeHHHcCCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHH
Confidence 57999998 5599999999999999999999 899998 99999999999999987 489999999875 67
Q ss_pred hHHHHhcCccccCCCCCcceeEEe---cCchHHHHHhCceecCC-----C----ceeeEEEEEeCCceEEEEEec
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLS---DLTHKISLDYGVYLSDQ-----G----HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~gv~~~~~-----~----~~~p~~~lId~~G~i~~~~~~ 379 (384)
.+++|++++ +.+|+++. |..+.++++||+...+. + .+.+++||||++|+|++++..
T Consensus 78 ~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g 145 (164)
T 2ggt_A 78 AIANYVKEF-------SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQ 145 (164)
T ss_dssp HHHHHHHTT-------CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEET
T ss_pred HHHHHHHHc-------CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCC
Confidence 888898876 78899985 44468999999843220 0 123389999999999998753
No 135
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=174.84 Aligned_cols=123 Identities=12% Similarity=0.021 Sum_probs=99.9
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC------
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------ 313 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 313 (384)
...+|+.+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++|++|+.|
T Consensus 22 ~~~~g~~~p~f~l~---~~~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e 97 (181)
T 2p31_A 22 SMQQEQDFYDFKAV---NIRGKLVSLEKYRGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQE 97 (181)
T ss_dssp -----CCGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cCCcCCccCceEee---cCCCCEecHHHcCCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCC
Confidence 35689999999998 5599999999999999999999 9999999999999999999999999999999986
Q ss_pred --CHHhHHHHhcC-ccccCCCCCcceeEEe--cCchHHHH---HhCceecCCCceee-------EEEEEeCCceEEEEEe
Q psy17178 314 --SHFTHLAWVNT-PRKEGGLGKLKIPLLS--DLTHKISL---DYGVYLSDQGHTLD-------KYCLECYKMVIVYWFE 378 (384)
Q Consensus 314 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~--D~~~~~~~---~~gv~~~~~~~~~p-------~~~lId~~G~i~~~~~ 378 (384)
+++.+++|+++ + +++||++. |.++.... .|++ ...| ++||||++|+|++++.
T Consensus 98 ~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~g~~~~~~~~~~~------~~~P~~~~~~~~~~lid~~G~i~~~~~ 164 (181)
T 2p31_A 98 PDSNKEIESFARRTY-------SVSFPMFSKIAVTGTGAHPAFKYLA------QTSGKEPTWNFWKYLVAPDGKVVGAWD 164 (181)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCCCCCSSTTSCHHHHHHH------HHHSCCCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHhhc-------CCCceeEeecccCCccchhhhhhhh------hcCCCccccceeEEEEcCCCCEEEEeC
Confidence 56788888876 5 78999996 44443322 3334 3456 8999999999999876
Q ss_pred c
Q psy17178 379 R 379 (384)
Q Consensus 379 ~ 379 (384)
.
T Consensus 165 g 165 (181)
T 2p31_A 165 P 165 (181)
T ss_dssp T
T ss_pred C
Confidence 3
No 136
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.87 E-value=2.6e-22 Score=168.29 Aligned_cols=123 Identities=20% Similarity=0.284 Sum_probs=107.8
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhHHh
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHLA 130 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~~~ 130 (384)
++|+++|+|++.+. +|+.+++++++||++||+|| ++|||+|+.++|.|.++++++++.++.+++|+.|. ++..++
T Consensus 1 ~~G~~~p~~~l~~~---~g~~~~l~~~~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~ 76 (151)
T 2f9s_A 1 SEGSDAPNFVLEDT---NGKRIELSDLKGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHN 76 (151)
T ss_dssp -CCEECCCCEEECT---TCCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHH
T ss_pred CCCCcCCcceeEcC---CCCEEEHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 37999999999877 99999999999999999999 99999999999999999999998899999999865 677778
Q ss_pred hccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 131 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 131 ~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|.+.. +++||++.|.++++++.||+ . ..|+++++|++|+|+....|..
T Consensus 77 ~~~~~-------~~~~~~~~d~~~~~~~~~~v--------~---~~P~~~lid~~G~i~~~~~G~~ 124 (151)
T 2f9s_A 77 FMKSY-------GVNFPVVLDTDRQVLDAYDV--------S---PLPTTFLINPEGKVVKVVTGTM 124 (151)
T ss_dssp HHHHH-------TCCSCEEEETTSHHHHHTTC--------C---SSCEEEEECTTSEEEEEEESCC
T ss_pred HHHHc-------CCCceEEECCchHHHHhcCC--------C---CCCeEEEECCCCcEEEEEeCCC
Confidence 87743 78999999999999999998 2 2457899999999987655543
No 137
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.87 E-value=7.6e-23 Score=177.47 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=99.0
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-----
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----- 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----- 123 (384)
..+++|+++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++++++++|+.|
T Consensus 21 ~~~~~g~~~p~f~l~~~---~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~ 96 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNI---RGKLVSLEKYRGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQ 96 (181)
T ss_dssp ------CCGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred CcCCcCCccCceEeecC---CCCEecHHHcCCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCC
Confidence 45679999999999877 99999999999999999999 9999999999999999999999999999999986
Q ss_pred ---CHHhHHhhccCccccCCCCccceeEEe--eCcchhHH-h--hcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 124 ---SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-D--YGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 124 ---~~~~~~~~~~~~~~~~~~~~~~~p~l~--D~~~~~~~-~--ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+.+..++|.+. ++ +++||++. |.++..+. . |++...+ +..+. ..++||||++|+|+....|.
T Consensus 97 e~~~~~~~~~~~~~--~~----~~~~p~~~~~d~~g~~~~~~~~~~~~~~P-~~~~~---~~~~~lid~~G~i~~~~~g~ 166 (181)
T 2p31_A 97 EPDSNKEIESFARR--TY----SVSFPMFSKIAVTGTGAHPAFKYLAQTSG-KEPTW---NFWKYLVAPDGKVVGAWDPT 166 (181)
T ss_dssp CCSCHHHHHHHHHH--HH----CCCSCBBCCCCCSSTTSCHHHHHHHHHHS-CCCCS---TTCEEEECTTSCEEEEECTT
T ss_pred CCCCHHHHHHHHHh--hc----CCCceeEeecccCCccchhhhhhhhhcCC-Ccccc---ceeEEEEcCCCCEEEEeCCC
Confidence 46677778764 03 78999996 44454333 2 3331111 00000 01678999999999876664
Q ss_pred e
Q psy17178 196 L 196 (384)
Q Consensus 196 ~ 196 (384)
.
T Consensus 167 ~ 167 (181)
T 2p31_A 167 V 167 (181)
T ss_dssp S
T ss_pred C
Confidence 4
No 138
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.87 E-value=1.2e-21 Score=162.51 Aligned_cols=122 Identities=13% Similarity=0.151 Sum_probs=108.7
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC----CH
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----SH 315 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----~~ 315 (384)
.+.+|+.+|+|+++ |.+|+.+++++ +||++||+|| ++||++|+.+++.|+++++++++.++.+++|+.| ++
T Consensus 8 ~~~~g~~~p~~~l~---~~~g~~~~l~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~ 82 (145)
T 3erw_A 8 EEKQPAVPAVFLMK---TIEGEDISIPN-KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQ 82 (145)
T ss_dssp ----CCSCCEEEEE---CTTSCEEEESC-TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCH
T ss_pred cccCCCcCCCceee---cCCCCEEeHHH-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCH
Confidence 34689999999998 55999999999 9999999999 9999999999999999999998788999999985 67
Q ss_pred HhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 316 FTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+..++|.+.+ +++|+++.|.++.+.+.|++ ..+|+++|||++|+|++.+..
T Consensus 83 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 133 (145)
T 3erw_A 83 QVVEDFIKAN-------KLTFPIVLDSKGELMKEYHI------ITIPTSFLLNEKGEIEKTKIG 133 (145)
T ss_dssp HHHHHHHHHT-------TCCSCEEECSSSHHHHHTTC------CEESEEEEECTTCCEEEEEES
T ss_pred HHHHHHHHHc-------CCceeEEEcCchhHHHhcCc------CccCeEEEEcCCCcEEEEEcC
Confidence 7888888776 88999999999999999999 789999999999999997764
No 139
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.86 E-value=7.7e-23 Score=178.41 Aligned_cols=138 Identities=9% Similarity=0.002 Sum_probs=104.4
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-----
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----- 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----- 123 (384)
..+..+.++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|+++|+|+.|
T Consensus 18 ~~~~~~~~~p~f~l~d~---~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~ 93 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDA---DHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQ 93 (187)
T ss_dssp --CTTCCSGGGSCCBBT---TSCBCCGGGGTTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSC
T ss_pred hhhcCCCccCCeEEEcC---CCCEeeHHHhCCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCC
Confidence 45678899999999877 99999999999999999999 9999999999999999999999999999999987
Q ss_pred ---CHHhHHhhccCccccCCCCccceeEEe--eCcchhHH-hhcCcccCCCCcccceeEE---EEEEEecCCCcccccce
Q psy17178 124 ---SHFTHLAWVNTPRKEGGLGKLKIPLLS--DLTHKISL-DYGVYLSDQGPVRGSLLST---AIFVYALTSPVNGYAGG 194 (384)
Q Consensus 124 ---~~~~~~~~~~~~~~~~~~~~~~~p~l~--D~~~~~~~-~ygv~~~~~g~~~g~~~~~---~~~vid~~G~v~~~~~g 194 (384)
+.+..++|.+. ++ +++||++. |.++..+. .|+......+...|+...| ++||||++|+|+....|
T Consensus 94 e~~~~~~~~~~~~~--~~----~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g 167 (187)
T 3dwv_A 94 EPGNEEEIKEFVCT--KF----KAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP 167 (187)
T ss_dssp SSSBTTHHHHSCCB--CC----CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT
T ss_pred CCCCHHHHHHHHHh--cc----CCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECC
Confidence 35666677662 12 78999997 55554332 2321111111123334445 78999999999987666
Q ss_pred ee
Q psy17178 195 AL 196 (384)
Q Consensus 195 ~~ 196 (384)
..
T Consensus 168 ~~ 169 (187)
T 3dwv_A 168 GA 169 (187)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 140
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.86 E-value=4e-22 Score=173.73 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=108.3
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC------
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV------ 122 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~------ 122 (384)
..+.+|+++|+|++.+. +|++++|++++||++||+|| ++|||+|+.+++.|++++++|+++ +++++|+.
T Consensus 5 ~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~ 79 (188)
T 2cvb_A 5 PELPLESPLIDAELPDP---RGGRYRLSQFHEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKY 79 (188)
T ss_dssp CCCCTTCBCCCCEEECT---TSCEEEGGGCCSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTC
T ss_pred CcCCCCCCCCCceeecC---CCCEEeHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccc
Confidence 35679999999999877 99999999999999999999 999999999999999999999887 99999998
Q ss_pred --CCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 123 --DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 123 --d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|+.+..++|.+.. +++||++.|.++++++.||+ ...|++||||++|+|+.. |..
T Consensus 80 ~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v-----------~~~P~~~lid~~G~i~~~--g~~ 135 (188)
T 2cvb_A 80 PEDAPEKMAAFAEEH-------GIFFPYLLDETQEVAKAYRA-----------LRTPEVFLFDERRLLRYH--GRV 135 (188)
T ss_dssp GGGSHHHHHHHHHHH-------TCCSCEEECSSSHHHHHTTC-----------CEESEEEEECTTCBEEEE--ECS
T ss_pred cccCHHHHHHHHHHh-------CCCceEEECCcchHHHHcCC-----------CCCCeEEEECCCCcEEEE--Eec
Confidence 4567777787743 78999999999999999998 235678999999999865 544
No 141
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.86 E-value=1.6e-21 Score=167.53 Aligned_cols=135 Identities=17% Similarity=0.130 Sum_probs=104.0
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCC-CchHHHHHHHHhHHHHHhC--CcEEEEEeCCC----
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQI--NTEVVAASVDS---- 124 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp-~C~~~~~~l~~~~~~~~~~--~v~vi~Vs~d~---- 124 (384)
.+|.++|+|+|.+. +|++++|++++||++||+|| .+||| +|+.+++.|.++++.+++. ++++|+||+|+
T Consensus 7 P~~~~~PdF~L~d~---~G~~v~l~d~~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt 82 (170)
T 4hde_A 7 PLNWDLETFQFTNQ---DGKPFGTKDLKGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK 82 (170)
T ss_dssp CCCBCCCCCEEECT---TSCEEEHHHHTTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred CCCCcCCCcEEECC---CCCEEeHHHhCCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc
Confidence 47999999999766 99999999999999999999 88997 8999999999999999765 48899999874
Q ss_pred HHhHHhhccCccccCCCCccceeEEeeCcc-hhH----HhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTH-KIS----LDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~-~~~----~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++.+++|++.+. .+...|.++.+... .+. ..|++...... ...+.+++.+||||++|+|+.+..|.
T Consensus 83 p~~l~~y~~~~~----~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~H~~~~~liD~~G~i~~~~~g~ 153 (170)
T 4hde_A 83 PENLKAFIQKFT----EDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPE-NGQVIHGTSFYLIDQNGKVMKKYSGI 153 (170)
T ss_dssp HHHHHHHHTTTC----SCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCT-TSCCBCCCEEEEECTTSCEEEEEESS
T ss_pred HHHHHHHHHHcC----CCCCCceecCcccHHHHHHHHHhcccccccCCC-CceEEeeeEEEEEcCCCeEEEEECCC
Confidence 677888888652 22456778876543 222 33555433311 24455678899999999999776554
No 142
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.86 E-value=1.5e-21 Score=173.25 Aligned_cols=126 Identities=10% Similarity=-0.037 Sum_probs=99.3
Q ss_pred CCCCCCCceeeeEEcCc-ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy17178 243 VSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 313 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~-g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-------- 313 (384)
.++.+|+|+++ |.+ |+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++||+|+.|
T Consensus 22 ~~~~~p~f~l~---~~~~G~~v~l~~~~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d 97 (208)
T 2f8a_A 22 SMQSVYAFSAR---PLAGGEPVSLGSLRGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENA 97 (208)
T ss_dssp CCCCGGGCEEC---BTTCSSCEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCS
T ss_pred hcCccCceEee---eCCCCCCccHHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCC
Confidence 56789999998 448 9999999999999999999 9999999999999999999999999999999986
Q ss_pred CHHhHHHHhc------CccccCCCCCcceeEEecCc--hH----HHH----HhCc--------e-------ec----CCC
Q psy17178 314 SHFTHLAWVN------TPRKEGGLGKLKIPLLSDLT--HK----ISL----DYGV--------Y-------LS----DQG 358 (384)
Q Consensus 314 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~D~~--~~----~~~----~~gv--------~-------~~----~~~ 358 (384)
+++.+++|++ ++ +++||++.|.+ +. +.+ .++. + .. ..-
T Consensus 98 ~~~~i~~f~~~~~~~~~~-------~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 98 KNEEILNSLKYVRPGGGF-------EPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp CHHHHHHHHHHTSSCTTC-------CCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred CHHHHHHHHHhccccccc-------ccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 4577888887 44 78999996533 22 222 2210 0 00 001
Q ss_pred ceeeEEEEEeCCceEEEEEec
Q psy17178 359 HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 359 ~~~p~~~lId~~G~i~~~~~~ 379 (384)
...|++||||++|+|++++..
T Consensus 171 ~~~p~tflID~~G~i~~~~~g 191 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRYSR 191 (208)
T ss_dssp CSTTCEEEECTTSCEEEEECT
T ss_pred ccCceEEEEcCCCcEEEEeCC
Confidence 245899999999999998763
No 143
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.86 E-value=2.7e-22 Score=174.98 Aligned_cols=125 Identities=13% Similarity=0.069 Sum_probs=100.9
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
...+.++|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++||+|++|
T Consensus 20 ~~~~~~~p~f~l~---d~~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~ 95 (187)
T 3dwv_A 20 MSAASSIFDFEVL---DADHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEP 95 (187)
T ss_dssp CTTCCSGGGSCCB---BTTSCBCCGGGGTTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSS
T ss_pred hcCCCccCCeEEE---cCCCCEeeHHHhCCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCC
Confidence 3567899999998 5599999999999999999999 9999999999999999999999999999999986
Q ss_pred -CHHhHHHHhc-CccccCCCCCcceeEEe--cCchHHH-HHh--------CceecCCCceee---EEEEEeCCceEEEEE
Q psy17178 314 -SHFTHLAWVN-TPRKEGGLGKLKIPLLS--DLTHKIS-LDY--------GVYLSDQGHTLD---KYCLECYKMVIVYWF 377 (384)
Q Consensus 314 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~--D~~~~~~-~~~--------gv~~~~~~~~~p---~~~lId~~G~i~~~~ 377 (384)
+++.+++|++ ++ +++||++. |.++..+ ..| +++.. ..+| ++||||++|+|++.+
T Consensus 96 ~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~---~~iP~~~~~~liD~~G~i~~~~ 165 (187)
T 3dwv_A 96 GNEEEIKEFVCTKF-------KAEFPIMAKINVNGENAHPLYEYMKKTKPGILAT---KAIKWNFTSFLIDRDGVPVERF 165 (187)
T ss_dssp SBTTHHHHSCCBCC-------CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSS---SSCCSTTCEEEECTTSCEEEEE
T ss_pred CCHHHHHHHHHhcc-------CCCCceeeccccCCcchhHHHHHHHhhcCCccCC---CccccceeEEEECCCCCEEEEE
Confidence 4567777776 33 78899986 4444322 122 33211 2566 999999999999987
Q ss_pred ec
Q psy17178 378 ER 379 (384)
Q Consensus 378 ~~ 379 (384)
..
T Consensus 166 ~g 167 (187)
T 3dwv_A 166 SP 167 (187)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 144
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.86 E-value=1.1e-21 Score=168.36 Aligned_cols=133 Identities=10% Similarity=-0.008 Sum_probs=104.7
Q ss_pred CCCCCCC-CceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCc-CchHhHHHHHHHHHHHHh--CCcEEEEEeCC---C
Q psy17178 242 FVSKPAP-FWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTF-VCPTEILAFNDRLEEFHQ--INTEVVAASVD---S 314 (384)
Q Consensus 242 ~~g~~~P-~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~-~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d---~ 314 (384)
.+|+++| +|+++ |.+|+++++++++||++||+|| ++||| +|+.+++.|+++++++++ .++++|+||.| +
T Consensus 2 ~~G~~~P~~f~l~---d~~G~~v~l~~~~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~ 77 (170)
T 3me7_A 2 SLGTYVPGDITLV---DSYGNEFQLKNLKGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDT 77 (170)
T ss_dssp CTTCBCCTTCEEE---ETTCCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCC
T ss_pred CCCCcCCCCeEEE---cCCcCEEchHHhCCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCC
Confidence 4789999 99998 5599999999999999999999 89997 699999999999999975 56999999986 5
Q ss_pred HHhHHHHhcCccccCCCCCcceeEEe--c--CchHHHHHhCceecC--C-CceeeEEEEEeCCceEEEEEecCCC
Q psy17178 315 HFTHLAWVNTPRKEGGLGKLKIPLLS--D--LTHKISLDYGVYLSD--Q-GHTLDKYCLECYKMVIVYWFERGNC 382 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~--D--~~~~~~~~~gv~~~~--~-~~~~p~~~lId~~G~i~~~~~~~~~ 382 (384)
++.+++|++++... ...|+++. | ...+++++||+.... . -.+.|++||||++|+|++++.....
T Consensus 78 ~~~~~~~~~~~~~~----~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~ 148 (170)
T 3me7_A 78 LEDIKRFQKEYGID----GKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNY 148 (170)
T ss_dssp HHHHHHHHHHTTCC----SSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSC
T ss_pred HHHHHHHHHHcCCC----CCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCC
Confidence 77888888876211 23444432 3 237888998864321 1 1467899999999999998765433
No 145
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.86 E-value=4.1e-22 Score=174.62 Aligned_cols=121 Identities=15% Similarity=0.124 Sum_probs=107.3
Q ss_pred ccccCCCCCCccEEE-eeecCccceEEccccCCCe-EEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC----
Q psy17178 49 YSKNLSKPAPFWQGT-AVVDGQLKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV---- 122 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~-~~~~~~g~~~~l~~~~gk~-vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~---- 122 (384)
..+.+|+++|+|++. +. +|++++|++++||+ +||+|| ++|||+|+.++|.|++++++|+++++++++|+.
T Consensus 16 ~~~~~g~~~p~f~l~~~~---~G~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~ 91 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVI---DGNVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAE 91 (196)
T ss_dssp CCCCTTCBCCCCEEEETT---TCCEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTT
T ss_pred cCCCcCCcCCceeeeecC---CCCEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccc
Confidence 356799999999997 76 99999999999984 999999 999999999999999999999988999999999
Q ss_pred ----CCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccc
Q psy17178 123 ----DSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGY 191 (384)
Q Consensus 123 ----d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~ 191 (384)
|+++..++|.+.. +++||++.|.++++++.||+ ...|++||||++|+|+..
T Consensus 92 ~~~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v-----------~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 92 QYPEDSPENMKKVAEEL-------GYPFPYLYDETQEVAKAYDA-----------ACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp TCGGGSHHHHHHHHHHH-------TCCSCEEECSSCHHHHHHTC-----------CEESEEEEEETTCBEEEE
T ss_pred cccccCHHHHHHHHHHc-------CCCceEEECCchHHHHHhCC-----------CCCCeEEEEcCCCeEEEc
Confidence 4567777887743 78999999999999999998 345678999999999854
No 146
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.86 E-value=9.6e-22 Score=170.53 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=111.0
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCc------EEEEEeC
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINT------EVVAASV 122 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v------~vi~Vs~ 122 (384)
..+..|+++|+|+++++ ..+|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|+ ++++|+.
T Consensus 29 ~~~~~g~~~p~f~l~~~-~~~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~ 106 (183)
T 3lwa_A 29 YDEADRQQLPDIGGDSL-MEEGTQINLSDFENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV 106 (183)
T ss_dssp CCGGGCCCCCCCEEEBS-SSTTCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC
T ss_pred cccccCCCCCceecccc-ccCCcEecHHHhCCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC
Confidence 45679999999999654 1278999999999999999999 99999999999999999999999999 9999999
Q ss_pred CC--HHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 123 DS--HFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 123 d~--~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|+ ++..++|.+.+ +++||++.|.++.+.+.||.+. +...|++||||++|+|+....|..
T Consensus 107 d~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~--------v~~~P~~~lid~~G~i~~~~~g~~ 167 (183)
T 3lwa_A 107 RDYSRDIAQDFVTDN-------GLDYPSIYDPPFMTAASLGGVP--------ASVIPTTIVLDKQHRPAAVFLREV 167 (183)
T ss_dssp SCCCHHHHHHHHHHT-------TCCSCEEECTTCGGGGGTTTCC--------TTCCSEEEEECTTSCEEEEECSCC
T ss_pred CCCCHHHHHHHHHHc-------CCCccEEECCcchHHHHhccCC--------CCCCCeEEEECCCCcEEEEEcCCC
Confidence 87 78888888753 7899999999999999998521 223467899999999987666653
No 147
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.86 E-value=4.4e-22 Score=173.07 Aligned_cols=131 Identities=18% Similarity=0.184 Sum_probs=112.1
Q ss_pred cccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCH--
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSH-- 125 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~-- 125 (384)
...+.+|+++|+|++.+. +|++++|++++||++||+|| ++|||+|+.+++.|+++++++++.++++++|+.|..
T Consensus 31 ~~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~ 106 (186)
T 1jfu_A 31 LTMASAPLKLPDLAFEDA---DGKPKKLSDFRGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDP 106 (186)
T ss_dssp CEECCSCCBCCCCEEECT---TSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCT
T ss_pred hccccCCCcCCCcEeEcC---CCCEeeHHHcCCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCH
Confidence 345679999999999877 99999999999999999999 999999999999999999999888999999999863
Q ss_pred HhHHhhccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 126 FTHLAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+..++|.+.+ ++ .||++.|.++.+++.|++.... ...|++||||++|+|+....|..
T Consensus 107 ~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~-------~~~P~~~lid~~G~i~~~~~g~~ 164 (186)
T 1jfu_A 107 EKPKTFLKEA-------NLTRLGYFNDQKAKVFQDLKAIGRA-------LGMPTSVLVDPQGCEIATIAGPA 164 (186)
T ss_dssp THHHHHHHHT-------TCCTTCCEECTTCHHHHHHHTTTCC-------SSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHHc-------CCCCCceEECCcchHHHHhcccccc-------CCCCEEEEECCCCCEEEEEecCC
Confidence 6677887743 66 5999999999999999995322 22467899999999987766653
No 148
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.86 E-value=8.6e-23 Score=174.57 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=101.3
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC------
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------ 123 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d------ 123 (384)
.+++|+++|+|++.+. +|++++|++++||++||+|| ++|||+|+.++|.|++++++++++++++++|+.|
T Consensus 5 ~~~~g~~~p~f~l~~~---~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDA---KENDVDLSIFKGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp -----CCGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred cCCCCccccceEEEcC---CCCEecHHHhCCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 4568999999999877 99999999999999999999 8999999999999999999999889999999986
Q ss_pred --CHHhHHhhcc-CccccCCCCccceeEE--eeCcchhHH-hh--------cCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 124 --SHFTHLAWVN-TPRKEGGLGKLKIPLL--SDLTHKISL-DY--------GVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 124 --~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~-~y--------gv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
+.+..++|.+ .+ +++||++ .|.++..++ .| |++. ++++.++++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~------~~~p~~~~~~lid~~G~i~ 147 (170)
T 2p5q_A 81 PGTNDQITDFVCTRF-------KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG------DDIQWNFAKFLVNKDGQVV 147 (170)
T ss_dssp CSCHHHHHHHHHHHT-------CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC------SCCCSTTCEEEECTTSCEE
T ss_pred CCCHHHHHHHHHHhc-------CCCceeEeeeccCCCchHHHHHHHHhcCCCccC------CcccccccEEEECCCCCEE
Confidence 4667777776 32 7889999 677766542 23 4311 2223233789999999999
Q ss_pred cccceee
Q psy17178 190 GYAGGAL 196 (384)
Q Consensus 190 ~~~~g~~ 196 (384)
....|..
T Consensus 148 ~~~~g~~ 154 (170)
T 2p5q_A 148 DRYYPTT 154 (170)
T ss_dssp EEECTTS
T ss_pred EeeCCCC
Confidence 8776654
No 149
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.86 E-value=2.4e-21 Score=167.24 Aligned_cols=118 Identities=19% Similarity=0.216 Sum_probs=105.8
Q ss_pred CCCCCCCCCceeeeEEcCcc--eeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC-CCHHh
Q psy17178 241 PFVSKPAPFWQGTAVVDGQL--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV-DSHFT 317 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g--~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~-d~~~~ 317 (384)
+.+|+.+|+|+++++ +| +.+++++++||++||+|| ++||++|..++|.|++++++ ++.|++|+. |+++.
T Consensus 30 ~~~G~~~P~f~l~~~---~g~~~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~ 101 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSV---QDPARRLTEADLKGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAA 101 (176)
T ss_dssp TTTTSBCCCCEEEBS---SCTTSEEEGGGGCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHH
T ss_pred cccCCcCCCcEeccc---CCCCceecHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHH
Confidence 468999999999955 66 899999999999999999 99999999999999999875 799999995 67888
Q ss_pred HHHHhcCccccCCCCCccee-EEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++|++++ +++|+ ++.|.++.+.+.||+ ..+|++||||++|+|++.+..
T Consensus 102 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 151 (176)
T 3kh7_A 102 AIKWLNEL-------HNPYLLSISDADGTLGLDLGV------YGAPETYLIDKQGIIRHKIVG 151 (176)
T ss_dssp HHHHHHHT-------TCCCSEEEEETTCHHHHHHTC------CSSCEEEEECTTCBEEEEEES
T ss_pred HHHHHHHc-------CCCCceEEECCcchHHHHcCC------CCCCeEEEECCCCeEEEEEcC
Confidence 88998876 77887 578999999999999 678999999999999998764
No 150
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.86 E-value=6.1e-22 Score=164.91 Aligned_cols=122 Identities=13% Similarity=0.216 Sum_probs=105.4
Q ss_pred ccccCCCCCCccEEEeeecCccceEEcc--ccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHH-HhCCcEEEEEeCCC-
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLS--DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEF-HQINTEVVAASVDS- 124 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~--~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~-~~~~v~vi~Vs~d~- 124 (384)
..+++|+++|+|++.+. +|+.++++ +++||++||+|| ++|||+|+.++|.|.++++++ ++.++.+++|+.|.
T Consensus 3 ~~~~~g~~~p~~~l~~~---~g~~~~l~~~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~ 78 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNE---KGEKLSRSAERFRNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDID 78 (148)
T ss_dssp --CCTTSBCCCCCEEBT---TSCEECTTSTTTTTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSC
T ss_pred ccccCCCcCCCeEeeCC---CCCEEeccccccCCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCC
Confidence 35689999999999877 99999999 999999999999 999999999999999999999 88889999999986
Q ss_pred HHhHHhhccCccccCCCCccceeEEeeC---cchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~D~---~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
.+..++|.+. + +++||++.|. ...+++.||+. ..|+++++|++|+|+...
T Consensus 79 ~~~~~~~~~~---~----~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 79 REAWETAIKK---D----TLSWDQVCDFTGLSSETAKQYAIL-----------TLPTNILLSPTGKILARD 131 (148)
T ss_dssp HHHHHHHHHH---T----TCCSEEECCSCGGGCHHHHHTTCC-----------SSSEEEEECTTSBEEEES
T ss_pred HHHHHHHHHH---c----CCCceEEEccCCcchHHHHhcCCC-----------CcCEEEEECCCCeEEEec
Confidence 5566666653 3 8899999998 67999999982 235788999999997543
No 151
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.86 E-value=1.2e-21 Score=164.45 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=107.5
Q ss_pred ccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC--CCHHhH
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV--DSHFTH 128 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~--d~~~~~ 128 (384)
..+|+++|+|++.+. +|+.+++++++||++||.|| ++|||.|+.+++.|+++++++++.++.+++|+. |+.+..
T Consensus 2 ~~~G~~~p~~~l~~~---~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 77 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDL---HGKTVSNADLQGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESV 77 (153)
T ss_dssp --CCTTCCSCEEECT---TSCEEEHHHHTTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHH
T ss_pred CCCCCCCCCcEeecC---CCCCccHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHH
Confidence 358999999999877 99999999999999999999 999999999999999999999988999999994 567888
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++|.+.. +++||++.|.+.++++.||+. ..|+++++|++|+|+....|.
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~i~-----------~~P~~~lid~~G~i~~~~~g~ 126 (153)
T 2l5o_A 78 RQYVKDY-------GLPFTVMYDADKAVGQAFGTQ-----------VYPTSVLIGKKGEILKTYVGE 126 (153)
T ss_dssp HHHHHHT-------TCCSEEEECSSCHHHHHHTCC-----------SSSEEEEECSSSCCCEEEESS
T ss_pred HHHHHHc-------CCCceEEcCchHHHHHHcCCC-----------ccCeEEEECCCCcEEEEEcCC
Confidence 8888743 789999999999999999982 235788999999998665553
No 152
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.86 E-value=2.7e-21 Score=172.01 Aligned_cols=126 Identities=10% Similarity=-0.006 Sum_probs=98.3
Q ss_pred CCCCCCCCceeeeEEcCc-ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 242 FVSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~-g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
..+..+|+|+++ |.+ |++++|++++||++||+|| ++||++|+ |+|.|++++++|+++|++||+||.|
T Consensus 30 ~~~~~~pdF~l~---d~~~G~~v~Lsd~~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~ 104 (215)
T 2i3y_A 30 DEKGTIYDYEAI---ALNKNEYVSFKQYVGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEP 104 (215)
T ss_dssp CCCCCGGGCEEE---BSSSSCEEEGGGGTTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred cccCCcCCcEee---eCCCCCEEcHHHhCCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCC
Confidence 356789999998 558 9999999999999999999 99999998 9999999999999999999999964
Q ss_pred -CHHhHHHHhc------CccccCCCCCcceeEEecCc--hH----HHHHhC--------ceec-------C---CC-cee
Q psy17178 314 -SHFTHLAWVN------TPRKEGGLGKLKIPLLSDLT--HK----ISLDYG--------VYLS-------D---QG-HTL 361 (384)
Q Consensus 314 -~~~~~~~~~~------~~~~~~~~~~~~~~~~~D~~--~~----~~~~~g--------v~~~-------~---~~-~~~ 361 (384)
+++.+++|++ ++ +++||++.|.+ +. +.+.+. ++.. + .. ...
T Consensus 105 ~~~~~i~~f~~~~~~~~~~-------~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~n 177 (215)
T 2i3y_A 105 GDNKEILPGLKYVRPGGGF-------VPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWN 177 (215)
T ss_dssp SCHHHHHHHHHHTSSCTTC-------CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCST
T ss_pred CCHHHHHHHHHhccchhcc-------CccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccC
Confidence 4577888887 54 88999997643 32 222111 1100 0 00 123
Q ss_pred eEEEEEeCCceEEEEEec
Q psy17178 362 DKYCLECYKMVIVYWFER 379 (384)
Q Consensus 362 p~~~lId~~G~i~~~~~~ 379 (384)
|++||||++|+|++++..
T Consensus 178 pttfLID~~G~vv~~~~g 195 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSH 195 (215)
T ss_dssp TCEEEECTTSCEEEEECT
T ss_pred ceEEEECCCCeEEEEeCC
Confidence 789999999999998863
No 153
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.86 E-value=9.2e-22 Score=165.13 Aligned_cols=117 Identities=11% Similarity=0.057 Sum_probs=101.0
Q ss_pred CCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCcc
Q psy17178 247 APFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPR 326 (384)
Q Consensus 247 ~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~ 326 (384)
+|.+.+.. ..+|+++++++++||++||+|| ++||++|+.++|.|+++++++++.++.+++|+.|+++..++|++++
T Consensus 3 ~pa~~~~~--~~~G~~~~l~~~~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~- 78 (151)
T 3raz_A 3 LSADELAG--WKDNTPQSLQSLKAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQT- 78 (151)
T ss_dssp ----CEEE--TTTCCEECGGGCCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHS-
T ss_pred CCcchhhc--ccCCCEecHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHc-
Confidence 34444442 2599999999999999999999 9999999999999999999998889999999999999999999886
Q ss_pred ccCCCCCcceeEEecCc---hHHHHHhC--ceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 327 KEGGLGKLKIPLLSDLT---HKISLDYG--VYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 327 ~~~~~~~~~~~~~~D~~---~~~~~~~g--v~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++||++.|.+ ..+.+.|| + ..+|++||||++|+|++.+..
T Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 124 (151)
T 3raz_A 79 ------PVSYPIWRYTGANSRNFMKTYGNTV------GVLPFTVVEAPKCGYRQTITG 124 (151)
T ss_dssp ------CCSSCEEEECCSCHHHHHHTTTCCS------CCSSEEEEEETTTTEEEECCS
T ss_pred ------CCCCceEecCccchHHHHHHhCCcc------CCCCEEEEECCCCcEEEEECC
Confidence 89999998764 67888999 6 578999999999999997653
No 154
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.86 E-value=4e-21 Score=163.16 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=110.0
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC-HHhHH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHL 319 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~~ 319 (384)
..+|..+|+|++. |.+|+.+++++++||++||+|| ++||+.|..++|.|++++++++++++.+++|+.|+ ++..+
T Consensus 8 ~~~g~~~p~~~l~---~~~g~~~~l~~~~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~ 83 (165)
T 3or5_A 8 DARPTPAPSFSGV---TVDGKPFSSASLKGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVK 83 (165)
T ss_dssp CCCCCBCCCCEEE---CTTSCEEEGGGGTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHH
T ss_pred hcCCCCCCCceee---CCCCCEechhHcCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHH
Confidence 4689999999998 5599999999999999999999 99999999999999999999998899999999885 67788
Q ss_pred HHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|+++. +++|+++.|.+ .+.+.|+.+....-..+|++||||++|+|++.+..
T Consensus 84 ~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 135 (165)
T 3or5_A 84 NYMKTQ-------GIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVG 135 (165)
T ss_dssp HHHHHH-------TCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECS
T ss_pred HHHHHc-------CCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcC
Confidence 888876 88999999876 88889943221111678999999999999987754
No 155
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.86 E-value=3.3e-22 Score=177.42 Aligned_cols=138 Identities=7% Similarity=-0.047 Sum_probs=101.9
Q ss_pred cCCCCCCccEEEeeecCc-cceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-------
Q psy17178 52 NLSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 123 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~-g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d------- 123 (384)
..++++|+|++++. + |++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|++||+|+.|
T Consensus 21 ~~~~~~p~f~l~~~---~~G~~v~l~~~~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~ 96 (208)
T 2f8a_A 21 QSMQSVYAFSARPL---AGGEPVSLGSLRGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQEN 96 (208)
T ss_dssp -CCCCGGGCEECBT---TCSSCEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTC
T ss_pred hhcCccCceEeeeC---CCCCCccHHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCC
Confidence 46789999999877 8 9999999999999999999 9999999999999999999999999999999986
Q ss_pred -CHHhHHhhccCcc---ccCCCCccceeEEeeCc--chhHH-hhcCcccCC-----------C----C------ccccee
Q psy17178 124 -SHFTHLAWVNTPR---KEGGLGKLKIPLLSDLT--HKISL-DYGVYLSDQ-----------G----P------VRGSLL 175 (384)
Q Consensus 124 -~~~~~~~~~~~~~---~~~~~~~~~~p~l~D~~--~~~~~-~ygv~~~~~-----------g----~------~~g~~~ 175 (384)
+.+.+++|++.++ ++ +++||+++|.+ ++.+. .|+.+.... | . ..++..
T Consensus 97 d~~~~i~~f~~~~~~~~~~----~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 172 (208)
T 2f8a_A 97 AKNEEILNSLKYVRPGGGF----EPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAW 172 (208)
T ss_dssp SCHHHHHHHHHHTSSCTTC----CCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCS
T ss_pred CCHHHHHHHHHhccccccc----ccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcccc
Confidence 3567778876110 22 78999997543 43321 222211000 0 0 001222
Q ss_pred EEEEEEEecCCCcccccceeee
Q psy17178 176 STAIFVYALTSPVNGYAGGALY 197 (384)
Q Consensus 176 ~~~~~vid~~G~v~~~~~g~~~ 197 (384)
.|++||||++|+|+....|...
T Consensus 173 ~p~tflID~~G~i~~~~~g~~~ 194 (208)
T 2f8a_A 173 NFEKFLVGPDGVPLRRYSRRFQ 194 (208)
T ss_dssp TTCEEEECTTSCEEEEECTTSC
T ss_pred CceEEEEcCCCcEEEEeCCCCC
Confidence 3678999999999987776553
No 156
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.86 E-value=1.4e-21 Score=166.92 Aligned_cols=124 Identities=14% Similarity=0.151 Sum_probs=100.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
+.+|+.+|+|+++ |.+|+++++++++||++||+|| ++||++|+.++|.|+++++++++++++|++|+.|
T Consensus 6 ~~~g~~~p~f~l~---~~~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (170)
T 2p5q_A 6 SKNPESVHDFTVK---DAKENDVDLSIFKGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEP 81 (170)
T ss_dssp ----CCGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred CCCCccccceEEE---cCCCCEecHHHhCCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCC
Confidence 4589999999998 5599999999999999999999 8999999999999999999999989999999985
Q ss_pred -CHHhHHHHhc-CccccCCCCCcceeEE--ecCchHHHH-H--------hCceecCCCceee---EEEEEeCCceEEEEE
Q psy17178 314 -SHFTHLAWVN-TPRKEGGLGKLKIPLL--SDLTHKISL-D--------YGVYLSDQGHTLD---KYCLECYKMVIVYWF 377 (384)
Q Consensus 314 -~~~~~~~~~~-~~~~~~~~~~~~~~~~--~D~~~~~~~-~--------~gv~~~~~~~~~p---~~~lId~~G~i~~~~ 377 (384)
+++.+++|++ ++ +++||++ .|.++.... . +|++. ..+| ++||||++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~----~~~p~~~~~~lid~~G~i~~~~ 150 (170)
T 2p5q_A 82 GTNDQITDFVCTRF-------KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG----DDIQWNFAKFLVNKDGQVVDRY 150 (170)
T ss_dssp SCHHHHHHHHHHHT-------CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC----SCCCSTTCEEEECTTSCEEEEE
T ss_pred CCHHHHHHHHHHhc-------CCCceeEeeeccCCCchHHHHHHHHhcCCCccC----CcccccccEEEECCCCCEEEee
Confidence 5677888887 55 7889998 576654431 2 24311 2355 899999999999977
Q ss_pred ec
Q psy17178 378 ER 379 (384)
Q Consensus 378 ~~ 379 (384)
..
T Consensus 151 ~g 152 (170)
T 2p5q_A 151 YP 152 (170)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 157
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.86 E-value=1.3e-22 Score=177.46 Aligned_cols=134 Identities=10% Similarity=0.028 Sum_probs=102.9
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-----
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----- 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----- 123 (384)
..++.|+++|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++++++++|+.|
T Consensus 20 s~~~~~~~~p~f~l~~~---~G~~~~l~~~~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 95 (190)
T 2vup_A 20 SHMSAASSIFDFEVLDA---DHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQ 95 (190)
T ss_dssp ----CCCSGGGSCCBBT---TSSBCCGGGGTTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTC
T ss_pred ccCCCCCcccCeEEEcC---CCCEEEHHHcCCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCC
Confidence 45678999999999877 99999999999999999999 8999999999999999999999989999999998
Q ss_pred ---CHHhHHhhc-cCccccCCCCccceeEEe--eCcchhHH-hhcCcccCCCCcccceeEE------EEEEEecCCCccc
Q psy17178 124 ---SHFTHLAWV-NTPRKEGGLGKLKIPLLS--DLTHKISL-DYGVYLSDQGPVRGSLLST------AIFVYALTSPVNG 190 (384)
Q Consensus 124 ---~~~~~~~~~-~~~~~~~~~~~~~~p~l~--D~~~~~~~-~ygv~~~~~g~~~g~~~~~------~~~vid~~G~v~~ 190 (384)
+++..++|. +.. +++||++. |.++..++ .|+.+.... .++...| ++||||++|+|+.
T Consensus 96 ~~~~~~~~~~~~~~~~-------~~~~p~l~~~D~~~~~~~~~~~~l~~~~---~~v~~~P~i~~~~~~~lid~~G~i~~ 165 (190)
T 2vup_A 96 EPGNEEEIKEFVCTKF-------KAEFPIMAKINVNGENAHPLYEYMKKTK---PGILKTKAIKWNFTSFLIDRDGVPVE 165 (190)
T ss_dssp CCSCHHHHHHHHHHHH-------CCCSCBBCCCBSSSTTBCHHHHHHHHHS---CCGGGCCSCCSTTCEEEECTTSCEEE
T ss_pred CCCCHHHHHHHHHHhc-------CCCeEEEeecccCcccccHHHHHHHhhc---CCcCCCccccccceEEEECCCCcEEE
Confidence 567778887 543 78999997 66665543 232211110 1112223 7899999999987
Q ss_pred ccceee
Q psy17178 191 YAGGAL 196 (384)
Q Consensus 191 ~~~g~~ 196 (384)
...|..
T Consensus 166 ~~~g~~ 171 (190)
T 2vup_A 166 RFSPGA 171 (190)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 766544
No 158
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.86 E-value=2.6e-21 Score=164.33 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=105.0
Q ss_pred CCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCC-chHHHHHHHHhHHHHHh----CCcEEEEEeCCC----HH
Q psy17178 56 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ----INTEVVAASVDS----HF 126 (384)
Q Consensus 56 ~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~-C~~~~~~l~~~~~~~~~----~~v~vi~Vs~d~----~~ 126 (384)
.+|+|++.+. +|++++|++++||++||+|| ++|||+ |+.++|.|+++++++++ .++++++||.|+ ++
T Consensus 2 ~ap~f~l~~~---~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTH---TGERKTDKDYLGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 77 (164)
T ss_dssp CCCCCEEEET---TSCEEEGGGGTTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHH
T ss_pred CCCCeEEEeC---CCCEEeHHHcCCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHH
Confidence 5899999877 99999999999999999999 899998 99999999999999987 489999999986 66
Q ss_pred hHHhhccCccccCCCCccceeEEe---eCcchhHHhhcCcccCC----CCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLS---DLTHKISLDYGVYLSDQ----GPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~---D~~~~~~~~ygv~~~~~----g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+++|.+.+ +++||++. |..++++++||+...+. +......+.+++||||++|+|+....|..
T Consensus 78 ~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~ 147 (164)
T 2ggt_A 78 AIANYVKEF-------SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK 147 (164)
T ss_dssp HHHHHHHTT-------CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC
T ss_pred HHHHHHHHc-------CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC
Confidence 778888753 78899984 55578999999954331 10111223458999999999997665543
No 159
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.85 E-value=8.2e-22 Score=172.28 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=102.2
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 313 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-------- 313 (384)
..|+.+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++|++|+.|
T Consensus 23 ~~~~~~p~f~l~---~~~G~~~~l~~~~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 23 SAASSIFDFEVL---DADHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp -CCCSGGGSCCB---BTTSSBCCGGGGTTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred CCCCcccCeEEE---cCCCCEEEHHHcCCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 568899999998 5599999999999999999999 9999999999999999999999989999999997
Q ss_pred CHHhHHHHh-cCccccCCCCCcceeEEe--cCchHHHH---------HhCceecCCCceee------EEEEEeCCceEEE
Q psy17178 314 SHFTHLAWV-NTPRKEGGLGKLKIPLLS--DLTHKISL---------DYGVYLSDQGHTLD------KYCLECYKMVIVY 375 (384)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~--D~~~~~~~---------~~gv~~~~~~~~~p------~~~lId~~G~i~~ 375 (384)
+++.+++|+ +++ +++||++. |.++.+.+ .||+ ...| ++||||++|+|++
T Consensus 99 ~~~~~~~~~~~~~-------~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v------~~~P~i~~~~~~~lid~~G~i~~ 165 (190)
T 2vup_A 99 NEEEIKEFVCTKF-------KAEFPIMAKINVNGENAHPLYEYMKKTKPGI------LKTKAIKWNFTSFLIDRDGVPVE 165 (190)
T ss_dssp CHHHHHHHHHHHH-------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCG------GGCCSCCSTTCEEEECTTSCEEE
T ss_pred CHHHHHHHHHHhc-------CCCeEEEeecccCcccccHHHHHHHhhcCCc------CCCccccccceEEEECCCCcEEE
Confidence 678888888 666 78999986 55544322 2465 3455 9999999999999
Q ss_pred EEe
Q psy17178 376 WFE 378 (384)
Q Consensus 376 ~~~ 378 (384)
.+.
T Consensus 166 ~~~ 168 (190)
T 2vup_A 166 RFS 168 (190)
T ss_dssp EEC
T ss_pred EEC
Confidence 775
No 160
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=161.80 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=103.3
Q ss_pred CCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcC-chHhHHHHHHHHHHHHh----CCcEEEEEeCC----CHHhH
Q psy17178 248 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ----INTEVVAASVD----SHFTH 318 (384)
Q Consensus 248 P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~-C~~~~~~l~~l~~~~~~----~~v~vv~Is~d----~~~~~ 318 (384)
|+|+++ |.+|+++++++++||++||+|| ++||++ |+.++|.|+++++++++ .+++|++||.| +++.+
T Consensus 7 p~f~l~---~~~G~~~~l~~~~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLL---DHRGRARCKADFRGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAM 82 (171)
T ss_dssp SCCEEE---ETTSCEEETTTTTTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHH
T ss_pred CCeEEE---eCCCCEEeHHHhCCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHH
Confidence 899998 5599999999999999999999 999997 99999999999999985 58999999987 47788
Q ss_pred HHHhcCccccCCCCCcceeEEecCc---hHHHHHhCceecCC---------CceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLT---HKISLDYGVYLSDQ---------GHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~gv~~~~~---------~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|++++ +.+|+++.|.. +.++++||+...+. -.+.|++||||++|+|++++..
T Consensus 83 ~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g 148 (171)
T 2rli_A 83 ARYVQDF-------HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 148 (171)
T ss_dssp HHHHHTT-------CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEES
T ss_pred HHHHHHc-------CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECC
Confidence 8998876 78999998754 57899999853321 0245699999999999998763
No 161
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.85 E-value=1.4e-21 Score=168.76 Aligned_cols=123 Identities=19% Similarity=0.261 Sum_probs=105.7
Q ss_pred cccccCCCCCCccEEEeeecCcc--ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC-CC
Q psy17178 48 FYSKNLSKPAPFWQGTAVVDGQL--KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV-DS 124 (384)
Q Consensus 48 ~~~~~~G~~aP~f~l~~~~~~~g--~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~-d~ 124 (384)
...+.+|+++|+|++++. +| +++++++++||++||+|| ++|||+|+.++|.|++++++ ++++++|+. |+
T Consensus 27 ~~~~~~G~~~P~f~l~~~---~g~~~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~ 98 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPSV---QDPARRLTEADLKGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDD 98 (176)
T ss_dssp STTTTTTSBCCCCEEEBS---SCTTSEEEGGGGCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCC
T ss_pred ccccccCCcCCCcEeccc---CCCCceecHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCC
Confidence 345679999999999887 66 899999999999999999 99999999999999998875 899999995 56
Q ss_pred HHhHHhhccCccccCCCCcccee-EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p-~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++..++|.+.. +++|+ ++.|.++++++.||+. ..|++||||++|+|+....|..
T Consensus 99 ~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 153 (176)
T 3kh7_A 99 NAAAIKWLNEL-------HNPYLLSISDADGTLGLDLGVY-----------GAPETYLIDKQGIIRHKIVGVV 153 (176)
T ss_dssp HHHHHHHHHHT-------TCCCSEEEEETTCHHHHHHTCC-----------SSCEEEEECTTCBEEEEEESCC
T ss_pred HHHHHHHHHHc-------CCCCceEEECCcchHHHHcCCC-----------CCCeEEEECCCCeEEEEEcCCC
Confidence 78888888753 77888 5899999999999992 2457899999999987766654
No 162
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.85 E-value=1.6e-21 Score=168.83 Aligned_cols=125 Identities=12% Similarity=0.103 Sum_probs=100.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-------
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 313 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 313 (384)
...|..+|+|+++ |.+|+++++++++||++||+|| ++|||+|+.++|.|++++++|++++++|++||.|
T Consensus 12 ~~~~~~~p~f~l~---d~~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~ 87 (180)
T 3kij_A 12 KPKINSFYAFEVK---DAKGRTVSLEKYKGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCCCGGGCEEE---BTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCC
T ss_pred cCCcCcccceEEe---cCCCCEecHHHcCCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCC
Confidence 3578999999998 5599999999999999999999 9999999999999999999999999999999964
Q ss_pred -CHHhHHHHhcC-ccccCCCCCcceeEEecCc--hH---HHHHhCceecCCCceeeE----EEEEeCCceEEEEEec
Q psy17178 314 -SHFTHLAWVNT-PRKEGGLGKLKIPLLSDLT--HK---ISLDYGVYLSDQGHTLDK----YCLECYKMVIVYWFER 379 (384)
Q Consensus 314 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~--~~---~~~~~gv~~~~~~~~~p~----~~lId~~G~i~~~~~~ 379 (384)
+++.+++|+++ + +++||++.+.+ +. ....|..... ...|+ +||||++|+|++.+..
T Consensus 88 d~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~p~~~~~~~lid~~G~i~~~~~g 154 (180)
T 3kij_A 88 RPSKEVESFARKNY-------GVTFPIFHKIKILGSEGEPAFRFLVDSS---KKEPRWNFWKYLVNPEGQVVKFWRP 154 (180)
T ss_dssp SCHHHHHHHHHHHH-------CCCSCBBCCCCCSSTTCCHHHHHHHHHH---TCCCSSTTCEEEECTTSCEEEEECT
T ss_pred CCHHHHHHHHHHhc-------CCCCceeeeeeccCccccHHHHHHHhcC---CCCccccceEEEECCCCCEEEEECC
Confidence 67888888887 6 78999876322 21 1112211000 13566 9999999999998763
No 163
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.85 E-value=1.4e-21 Score=162.06 Aligned_cols=125 Identities=11% Similarity=0.261 Sum_probs=106.8
Q ss_pred ccccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC----C
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----S 124 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----~ 124 (384)
..+.+|+++|+|++.+. +|+.+++++ +||++||+|| ++|||+|+.+++.|.++++++++.++.+++|+.| +
T Consensus 7 ~~~~~g~~~p~~~l~~~---~g~~~~l~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~ 81 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTI---EGEDISIPN-KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQN 81 (145)
T ss_dssp -----CCSCCEEEEECT---TSCEEEESC-TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSC
T ss_pred ccccCCCcCCCceeecC---CCCEEeHHH-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCC
Confidence 35679999999999877 999999999 9999999999 9999999999999999999998788999999986 5
Q ss_pred HHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 125 HFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+..++|.+. + +++||++.|.++.+++.|++ ...|+++++|++|+|+....|..
T Consensus 82 ~~~~~~~~~~---~----~~~~~~~~d~~~~~~~~~~v-----------~~~P~~~lid~~G~i~~~~~g~~ 135 (145)
T 3erw_A 82 QQVVEDFIKA---N----KLTFPIVLDSKGELMKEYHI-----------ITIPTSFLLNEKGEIEKTKIGPM 135 (145)
T ss_dssp HHHHHHHHHH---T----TCCSCEEECSSSHHHHHTTC-----------CEESEEEEECTTCCEEEEEESCC
T ss_pred HHHHHHHHHH---c----CCceeEEEcCchhHHHhcCc-----------CccCeEEEEcCCCcEEEEEcCCc
Confidence 6677777764 3 78999999999999999998 34568899999999987766654
No 164
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.85 E-value=5.1e-21 Score=169.43 Aligned_cols=125 Identities=10% Similarity=0.049 Sum_probs=96.6
Q ss_pred CCCCCCCceeeeEEcCc-ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy17178 243 VSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 313 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~-g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-------- 313 (384)
....+|+|+++ |.+ |++++|++++||++||+|| ++|||+| .|+|.|++++++|+++|++||+||.|
T Consensus 13 ~~~~~pdF~l~---d~~~G~~v~Ls~~kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~ 87 (207)
T 2r37_A 13 ISGTIYEYGAL---TIDGEEYIPFKQYAGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPG 87 (207)
T ss_dssp --CCGGGCEEE---BTTSSCEEEGGGGTTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCS
T ss_pred ccCccCCeEee---eCCCCCEEcHHHhCCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCC
Confidence 34679999998 558 9999999999999999999 9999999 79999999999999999999999954
Q ss_pred CHHhHHHHhc------CccccCCCCCcceeEEecCc--hH----HHHHhC--------ceec-------C---CC-ceee
Q psy17178 314 SHFTHLAWVN------TPRKEGGLGKLKIPLLSDLT--HK----ISLDYG--------VYLS-------D---QG-HTLD 362 (384)
Q Consensus 314 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~D~~--~~----~~~~~g--------v~~~-------~---~~-~~~p 362 (384)
+++.+++|++ ++ +++||++.|.+ +. +.+.++ ++.. + .. ...|
T Consensus 88 ~~~~i~~f~~~~~~~~~~-------~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 88 ENSEILPTLKYVRPGGGF-------VPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp CHHHHHHHHHHTSSCTTC-------CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred CHHHHHHHHHhcchhhcc-------CccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 4577888887 54 88999997643 32 222111 1100 0 00 1347
Q ss_pred EEEEEeCCceEEEEEec
Q psy17178 363 KYCLECYKMVIVYWFER 379 (384)
Q Consensus 363 ~~~lId~~G~i~~~~~~ 379 (384)
++||||++|+|++++..
T Consensus 161 ttflID~~G~i~~~~~g 177 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWHH 177 (207)
T ss_dssp CEEEECTTSCEEEEECT
T ss_pred eEEEECCCCcEEEEECC
Confidence 89999999999998763
No 165
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.2e-22 Score=175.79 Aligned_cols=136 Identities=11% Similarity=0.041 Sum_probs=99.8
Q ss_pred cCCCCCCccEEEeeecCc-cceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-------
Q psy17178 52 NLSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------- 123 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~-g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d------- 123 (384)
..+..+|+|++++. + |++++|++|+||++||+|| ++|||+|+ |+|.|++++++|+++|++||+|+.|
T Consensus 30 ~~~~~~pdF~l~d~---~~G~~v~Lsd~~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~ 104 (215)
T 2i3y_A 30 DEKGTIYDYEAIAL---NKNEYVSFKQYVGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEP 104 (215)
T ss_dssp CCCCCGGGCEEEBS---SSSCEEEGGGGTTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred cccCCcCCcEeeeC---CCCCEEcHHHhCCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCC
Confidence 46678999999887 8 9999999999999999999 99999999 9999999999999999999999964
Q ss_pred -CHHhHHhhccCcc---ccCCCCccceeEEeeCc--chhH-HhhcCcccCC-------CC----------cccceeEEEE
Q psy17178 124 -SHFTHLAWVNTPR---KEGGLGKLKIPLLSDLT--HKIS-LDYGVYLSDQ-------GP----------VRGSLLSTAI 179 (384)
Q Consensus 124 -~~~~~~~~~~~~~---~~~~~~~~~~p~l~D~~--~~~~-~~ygv~~~~~-------g~----------~~g~~~~~~~ 179 (384)
+.+.+++|++.++ ++ +++||+++|.+ +..+ ..|+.+.... |. ...+...+++
T Consensus 105 ~~~~~i~~f~~~~~~~~~~----~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~nptt 180 (215)
T 2i3y_A 105 GDNKEILPGLKYVRPGGGF----VPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEK 180 (215)
T ss_dssp SCHHHHHHHHHHTSSCTTC----CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCE
T ss_pred CCHHHHHHHHHhccchhcc----CccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceE
Confidence 3567788876110 22 78999998653 4322 2343221100 00 0011112467
Q ss_pred EEEecCCCcccccceee
Q psy17178 180 FVYALTSPVNGYAGGAL 196 (384)
Q Consensus 180 ~vid~~G~v~~~~~g~~ 196 (384)
||||++|+|+....|..
T Consensus 181 fLID~~G~vv~~~~g~~ 197 (215)
T 2i3y_A 181 FLVGPDGIPVMRWSHRA 197 (215)
T ss_dssp EEECTTSCEEEEECTTS
T ss_pred EEECCCCeEEEEeCCCC
Confidence 99999999987665543
No 166
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.85 E-value=5e-21 Score=159.23 Aligned_cols=120 Identities=12% Similarity=0.107 Sum_probs=108.8
Q ss_pred CCCCCCCCcee--eeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC------
Q psy17178 242 FVSKPAPFWQG--TAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------ 313 (384)
Q Consensus 242 ~~g~~~P~f~l--~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 313 (384)
.+|+.+|+|++ .++ +|+.+++++++||++||+|| ++||+.|..++|.|++++++++++ +.+++|+.|
T Consensus 2 ~~g~~~P~f~~~~~~~---~g~~~~~~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~ 76 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWL---NGEVTREQLIGEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDL 76 (148)
T ss_dssp CTTCBCCCCCCCSEEE---SCCCCHHHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTS
T ss_pred CCCCCCCCCccccccc---cCcccchhhcCCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCcccc
Confidence 47899999999 544 99999999999999999999 999999999999999999999877 999999987
Q ss_pred CHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 314 SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++..++|++++ +++|+++.|.+..+.+.||+ ..+|+++|||++|++++.+..
T Consensus 77 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 129 (148)
T 2b5x_A 77 DPGKIKETAAEH-------DITQPIFVDSDHALTDAFEN------EYVPAYYVFDKTGQLRHFQAG 129 (148)
T ss_dssp SHHHHHHHHHHT-------TCCSCEEECSSCHHHHHTCC------CCSSEEEEECTTCBEEEEEES
T ss_pred CHHHHHHHHHHc-------CCCcceEECCchhHHHHhCC------CCCCEEEEECCCCcEEEEecC
Confidence 577888888876 88999999999999999999 689999999999999997754
No 167
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.85 E-value=2.9e-21 Score=170.33 Aligned_cols=136 Identities=16% Similarity=0.179 Sum_probs=103.6
Q ss_pred ccccCCCCC--CccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCC-chHHHHHHHHhHHHHHh---CCcEEEEEeC
Q psy17178 49 YSKNLSKPA--PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ---INTEVVAASV 122 (384)
Q Consensus 49 ~~~~~G~~a--P~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~-C~~~~~~l~~~~~~~~~---~~v~vi~Vs~ 122 (384)
....+|+++ |+|++.+. +|++++|++++||++||+|| ++|||+ |+.++|.|+++++++++ .++++++||.
T Consensus 11 ~~~~~g~~~~~p~f~l~d~---~G~~v~l~~~~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~ 86 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLEDM---YGNEFTEKNLLGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITC 86 (200)
T ss_dssp -----CCCCCCCCCEEEET---TSCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEES
T ss_pred hHhccCCCCcCCCEEEEcC---CCCEEeHHHcCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEEC
Confidence 345689986 99999877 99999999999999999999 999997 99999999999999975 3899999999
Q ss_pred C----CHHhHHhhccCccccCCCCccceeEEeeC---cchhHHhhcCccc-C----CCCcccceeEEEEEEEecCCCccc
Q psy17178 123 D----SHFTHLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYLS-D----QGPVRGSLLSTAIFVYALTSPVNG 190 (384)
Q Consensus 123 d----~~~~~~~~~~~~~~~~~~~~~~~p~l~D~---~~~~~~~ygv~~~-~----~g~~~g~~~~~~~~vid~~G~v~~ 190 (384)
| +++.+++|.+.+ +.+|+.+.+. .+.++++||+... + .|......+++++||||++|+|+.
T Consensus 87 D~~~d~~~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~ 159 (200)
T 2b7k_A 87 DPARDSPAVLKEYLSDF-------HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVD 159 (200)
T ss_dssp CTTTCCHHHHHHHHTTS-------CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHc-------CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEE
Confidence 8 477888888754 6788888743 4789999999632 1 011112234568899999999987
Q ss_pred cccee
Q psy17178 191 YAGGA 195 (384)
Q Consensus 191 ~~~g~ 195 (384)
...|.
T Consensus 160 ~~~g~ 164 (200)
T 2b7k_A 160 ALGRN 164 (200)
T ss_dssp EECTT
T ss_pred EeCCC
Confidence 65543
No 168
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.85 E-value=1.9e-21 Score=166.47 Aligned_cols=125 Identities=17% Similarity=0.212 Sum_probs=107.8
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcC-chHhHHHHHHHHHHHHhC---CcEEEEEeCC----
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQI---NTEVVAASVD---- 313 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~-C~~~~~~l~~l~~~~~~~---~v~vv~Is~d---- 313 (384)
.+|+.+|+|+++ |.+| ++++++++||++||+|| ++||++ |+.++|.|++++++++++ +++|++||.|
T Consensus 11 ~~G~~~p~f~l~---~~~g-~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d 85 (172)
T 2k6v_A 11 LLNPKPVDFALE---GPQG-PVRLSQFQDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERD 85 (172)
T ss_dssp EEEEEECCCEEE---CSSS-EEEGGGSTTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTC
T ss_pred ccCCCCCCeEEE---cCCC-CCcHHHhCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCC
Confidence 468889999998 5599 99999999999999999 999997 999999999999999764 7999999976
Q ss_pred CHHhHHHHhcCccccCCCCCcceeEEecCc---hHHHHHhCceecCCC---------ceeeEEEEEeCCceEEEEEec
Q psy17178 314 SHFTHLAWVNTPRKEGGLGKLKIPLLSDLT---HKISLDYGVYLSDQG---------HTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~gv~~~~~~---------~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++.+++|++++ +.+|+++.|++ +.++++||+...... .+.|++|||| +|+|++++..
T Consensus 86 ~~~~~~~~~~~~-------~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g 155 (172)
T 2k6v_A 86 PPEVADRYAKAF-------HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP 155 (172)
T ss_dssp CHHHHHHHHHHH-------CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH
T ss_pred CHHHHHHHHHHh-------CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC
Confidence 467888898876 78999999988 688999998533210 3679999999 9999997753
No 169
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.1e-21 Score=168.43 Aligned_cols=118 Identities=8% Similarity=0.041 Sum_probs=89.9
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC--------C
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD--------S 314 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d--------~ 314 (384)
.+..+|+|+++ |.+|+++++++++||++||+|| ++||++|+ ++|.|++++++++++++.|++||.| +
T Consensus 8 ~~~~~~~f~l~---d~~G~~~~l~~~~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~ 82 (171)
T 3cmi_A 8 HMSEFYKLAPV---DKKGQPFPFDQLKGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGS 82 (171)
T ss_dssp --CGGGGCCCB---BTTSCBCCGGGGTTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------
T ss_pred chhheeeeEEE---cCCCCEecHHHcCCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCC
Confidence 35678999998 5599999999999999999999 99999999 9999999999999999999999984 5
Q ss_pred HHhHHHHh-cCccccCCCCCcceeEEecCc--hH-HH--------HHhCceecCCCceee------EEEEEeCCceEEEE
Q psy17178 315 HFTHLAWV-NTPRKEGGLGKLKIPLLSDLT--HK-IS--------LDYGVYLSDQGHTLD------KYCLECYKMVIVYW 376 (384)
Q Consensus 315 ~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~--~~-~~--------~~~gv~~~~~~~~~p------~~~lId~~G~i~~~ 376 (384)
++..++|+ +++ +++||++.|.+ +. +. +.||+ ...| ++||||++|+|++.
T Consensus 83 ~~~~~~~~~~~~-------~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v------~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 83 DEEIAQFCQLNY-------GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGM------LGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCS------SSCCSCCSTTCEEEECSSSCEEEE
T ss_pred HHHHHHHHHhcc-------CCCceEEeeccCCCccchHHHHHHHhccCCc------CCCCcccccceEEEECCCCCEEEE
Confidence 56777777 655 78999998644 22 22 23555 4567 89999999999997
Q ss_pred Ee
Q psy17178 377 FE 378 (384)
Q Consensus 377 ~~ 378 (384)
+.
T Consensus 150 ~~ 151 (171)
T 3cmi_A 150 YS 151 (171)
T ss_dssp EC
T ss_pred eC
Confidence 75
No 170
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.85 E-value=2.7e-21 Score=164.21 Aligned_cols=130 Identities=18% Similarity=0.265 Sum_probs=111.0
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTH 128 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~ 128 (384)
.+++|+++|+|++.+. +|+++++++++||++||+|| ++|||+|+.++|.|+++++++++.++.+++|+.|+ .+..
T Consensus 7 ~~~~g~~~p~~~l~~~---~g~~~~l~~~~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~ 82 (165)
T 3or5_A 7 ADARPTPAPSFSGVTV---DGKPFSSASLKGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNV 82 (165)
T ss_dssp CCCCCCBCCCCEEECT---TSCEEEGGGGTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHH
T ss_pred hhcCCCCCCCceeeCC---CCCEechhHcCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHH
Confidence 4579999999999877 99999999999999999999 99999999999999999999998899999999886 6777
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++|.+.. +++||++.|.. ++.+.|+.+... ++...|++||+|++|+|+....|..
T Consensus 83 ~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~-----~i~~~P~~~lid~~G~i~~~~~g~~ 137 (165)
T 3or5_A 83 KNYMKTQ-------GIIYPVMMATP-ELIRAFNGYIDG-----GITGIPTSFVIDASGNVSGVIVGPR 137 (165)
T ss_dssp HHHHHHH-------TCCSCEEECCH-HHHHHHHTTSTT-----CSCSSSEEEEECTTSBEEEEECSCC
T ss_pred HHHHHHc-------CCCCceEecCH-HHHHHHhhhhcc-----CCCCCCeEEEECCCCcEEEEEcCCC
Confidence 7887743 78999999975 899999764321 2344568899999999987666644
No 171
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.84 E-value=7.5e-22 Score=168.99 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=110.8
Q ss_pred ccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCC-chHHHHHHHHhHHHHHhC---CcEEEEEeCCC--
Q psy17178 51 KNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQI---NTEVVAASVDS-- 124 (384)
Q Consensus 51 ~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~-C~~~~~~l~~~~~~~~~~---~v~vi~Vs~d~-- 124 (384)
..+|+++|+|++.+. +| +++|++++||++||+|| ++|||+ |+.++|.|++++++++++ ++++++|+.|+
T Consensus 10 ~~~G~~~p~f~l~~~---~g-~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~ 84 (172)
T 2k6v_A 10 RLLNPKPVDFALEGP---QG-PVRLSQFQDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPER 84 (172)
T ss_dssp EEEEEEECCCEEECS---SS-EEEGGGSTTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTT
T ss_pred cccCCCCCCeEEEcC---CC-CCcHHHhCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCC
Confidence 457899999999877 99 99999999999999999 999997 999999999999999865 79999999874
Q ss_pred --HHhHHhhccCccccCCCCccceeEEeeCc---chhHHhhcCcccCCC----CcccceeEEEEEEEecCCCccccccee
Q psy17178 125 --HFTHLAWVNTPRKEGGLGKLKIPLLSDLT---HKISLDYGVYLSDQG----PVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 125 --~~~~~~~~~~~~~~~~~~~~~~p~l~D~~---~~~~~~ygv~~~~~g----~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++.+++|.+.+ +++||++.|.. ++++++||+.....+ ...++...|++|||| +|+|+....|.
T Consensus 85 d~~~~~~~~~~~~-------~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~ 156 (172)
T 2k6v_A 85 DPPEVADRYAKAF-------HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPD 156 (172)
T ss_dssp CCHHHHHHHHHHH-------CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHH
T ss_pred CCHHHHHHHHHHh-------CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCC
Confidence 57778888753 78999999988 689999999754321 123345568899999 99998776665
Q ss_pred e
Q psy17178 196 L 196 (384)
Q Consensus 196 ~ 196 (384)
.
T Consensus 157 ~ 157 (172)
T 2k6v_A 157 K 157 (172)
T ss_dssp H
T ss_pred C
Confidence 4
No 172
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.3e-22 Score=172.65 Aligned_cols=129 Identities=9% Similarity=0.032 Sum_probs=92.3
Q ss_pred CCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC--------C
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD--------S 124 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d--------~ 124 (384)
-|..+|+|++++. +|++++|++++||++||+|| ++|||+|+ ++|.|++++++|+++|+++++|+.| +
T Consensus 8 ~~~~~~~f~l~d~---~G~~~~l~~~~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~ 82 (171)
T 3cmi_A 8 HMSEFYKLAPVDK---KGQPFPFDQLKGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGS 82 (171)
T ss_dssp --CGGGGCCCBBT---TSCBCCGGGGTTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------
T ss_pred chhheeeeEEEcC---CCCEecHHHcCCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCC
Confidence 4678899999877 99999999999999999999 99999999 9999999999999989999999984 4
Q ss_pred HHhHHhhc-cCccccCCCCccceeEEeeCc--ch-hHHhhcCcccCCCCcccceeEE------EEEEEecCCCcccccce
Q psy17178 125 HFTHLAWV-NTPRKEGGLGKLKIPLLSDLT--HK-ISLDYGVYLSDQGPVRGSLLST------AIFVYALTSPVNGYAGG 194 (384)
Q Consensus 125 ~~~~~~~~-~~~~~~~~~~~~~~p~l~D~~--~~-~~~~ygv~~~~~g~~~g~~~~~------~~~vid~~G~v~~~~~g 194 (384)
.+..++|. +. + +++||++.|.+ +. ..+.|+++.... .|+...| ++||||++|+|+....|
T Consensus 83 ~~~~~~~~~~~---~----~~~~p~~~d~d~~~~~~~~~~~~~~~~~---~~v~~~P~i~~~~~~~lid~~G~i~~~~~g 152 (171)
T 3cmi_A 83 DEEIAQFCQLN---Y----GVTFPIMKKIDVNGGNEDPVYKFLKSQK---SGMLGLRGIKWNFEKFLVDKKGKVYERYSS 152 (171)
T ss_dssp -------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHS---CCSSSCCSCCSTTCEEEECSSSCEEEEECT
T ss_pred HHHHHHHHHhc---c----CCCceEEeeccCCCccchHHHHHHHhcc---CCcCCCCcccccceEEEECCCCCEEEEeCC
Confidence 55666776 53 3 78999998744 33 344454432110 1122234 78999999999987666
Q ss_pred ee
Q psy17178 195 AL 196 (384)
Q Consensus 195 ~~ 196 (384)
..
T Consensus 153 ~~ 154 (171)
T 3cmi_A 153 LT 154 (171)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 173
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.84 E-value=1.2e-21 Score=169.67 Aligned_cols=130 Identities=9% Similarity=0.068 Sum_probs=100.3
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC--------
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 123 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d-------- 123 (384)
.+|..+|+|++++. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|+++++|+.|
T Consensus 13 ~~~~~~p~f~l~d~---~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d 88 (180)
T 3kij_A 13 PKINSFYAFEVKDA---KGRTVSLEKYKGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR 88 (180)
T ss_dssp CCCCCGGGCEEEBT---TSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCS
T ss_pred CCcCcccceEEecC---CCCEecHHHcCCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCC
Confidence 48999999999877 99999999999999999999 9999999999999999999999999999999965
Q ss_pred CHHhHHhhccCccccCCCCccceeEEeeC--cchhHH-hhcCcccCCCCcccceeEEE----EEEEecCCCcccccceee
Q psy17178 124 SHFTHLAWVNTPRKEGGLGKLKIPLLSDL--THKISL-DYGVYLSDQGPVRGSLLSTA----IFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~p~l~D~--~~~~~~-~ygv~~~~~g~~~g~~~~~~----~~vid~~G~v~~~~~g~~ 196 (384)
+++..++|.+. ++ +++||++.+. .+..+. .|+..... ....+. +||||++|+|+....|..
T Consensus 89 ~~~~~~~~~~~--~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~------~~~~p~~~~~~~lid~~G~i~~~~~g~~ 156 (180)
T 3kij_A 89 PSKEVESFARK--NY----GVTFPIFHKIKILGSEGEPAFRFLVDS------SKKEPRWNFWKYLVNPEGQVVKFWRPEE 156 (180)
T ss_dssp CHHHHHHHHHH--HH----CCCSCBBCCCCCSSTTCCHHHHHHHHH------HTCCCSSTTCEEEECTTSCEEEEECTTC
T ss_pred CHHHHHHHHHH--hc----CCCCceeeeeeccCccccHHHHHHHhc------CCCCccccceEEEECCCCCEEEEECCCC
Confidence 56777888774 03 7899997643 232211 22211110 001233 789999999998776665
Q ss_pred e
Q psy17178 197 Y 197 (384)
Q Consensus 197 ~ 197 (384)
.
T Consensus 157 ~ 157 (180)
T 3kij_A 157 P 157 (180)
T ss_dssp C
T ss_pred C
Confidence 3
No 174
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.84 E-value=3.6e-21 Score=160.12 Aligned_cols=120 Identities=16% Similarity=0.092 Sum_probs=103.8
Q ss_pred CCCCCCC-ceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeCC-CHHhHH
Q psy17178 243 VSKPAPF-WQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVD-SHFTHL 319 (384)
Q Consensus 243 ~g~~~P~-f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d-~~~~~~ 319 (384)
+|+.+|+ |+++++ +|+.+++++++||++||+|| ++||++|+.++|.|+++++++++ .++.|++|+.| +.+..+
T Consensus 3 ~~~~~P~~f~l~~~---~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~ 78 (144)
T 1i5g_A 3 LKKFFPYSTNVLKG---AAADIALPSLAGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFK 78 (144)
T ss_dssp TTTSCSSCSEEEET---TEEEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHH
T ss_pred hhhhCCCceEEEcC---CCCEecHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHH
Confidence 5788999 999854 99999999999999999999 99999999999999999999985 68999999998 577888
Q ss_pred HHhcCccccCCCCCcceeEEe-cCchHHHHHhCceecCCCceeeEEEEEe-CCceEEEEEe
Q psy17178 320 AWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGHTLDKYCLEC-YKMVIVYWFE 378 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~~~~~~p~~~lId-~~G~i~~~~~ 378 (384)
+|++++. ...+++.. |....+.+.||+ ..+|+++||| ++|+|++.+.
T Consensus 79 ~~~~~~~------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 79 DYYAKMP------WLALPFEDRKGMEFLTTGFDV------KSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHTTCS------SEECCTTCHHHHHHHHHHTTC------CSSSEEEEEETTTCCEEESCH
T ss_pred HHHHhCC------ccccccCchHHHHHHHHHcCC------CCCCEEEEEECCCCcEEeccc
Confidence 8888751 23566554 556899999999 6899999999 9999998654
No 175
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=4.5e-21 Score=160.69 Aligned_cols=124 Identities=18% Similarity=0.207 Sum_probs=106.1
Q ss_pred cccCCCCCC-ccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHh
Q psy17178 50 SKNLSKPAP-FWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFT 127 (384)
Q Consensus 50 ~~~~G~~aP-~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~ 127 (384)
.+++|+++| +|++.+. +|+++++++++||+++|+|| ++|||+|+.+++.|+++++++++.++.+++|+.|+ .+.
T Consensus 2 ~l~~G~~~p~~f~l~~~---~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (152)
T 2lja_A 2 SLRSGNPSAASFSYPDI---NGKTVSLADLKGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKA 77 (152)
T ss_dssp CTTTTCCCSSSCEEEET---TTEEEESTTTTTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHH
T ss_pred ccccCCCCCcccEeecC---CCCEeeHHHcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHH
Confidence 567999999 9999887 99999999999999999999 99999999999999999999988899999999987 456
Q ss_pred HHhhccCccccCCCCccc-eeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 128 HLAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~-~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.++|.+.. +++ ++++.|.+.++++.||+. + .|+++++|++|+|+....|.
T Consensus 78 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~--------~---~P~~~lid~~G~i~~~~~g~ 128 (152)
T 2lja_A 78 WENMVTKD-------QLKGIQLHMGTDRTFMDAYLIN--------G---IPRFILLDRDGKIISANMTR 128 (152)
T ss_dssp HHHHHHHH-------TCCSEEEECSSCTHHHHHTTCC--------S---SCCEEEECTTSCEEESSCCC
T ss_pred HHHHHHhc-------CCCCceeecCcchhHHHHcCcC--------C---CCEEEEECCCCeEEEccCCC
Confidence 67776643 455 577888889999999982 2 35688999999998765553
No 176
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.84 E-value=2.1e-21 Score=165.30 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=105.7
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC--------
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 313 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-------- 313 (384)
.+|+.+|+|++. |.+|+.+++++++||++||+|| ++||++|..++|.|++++++++ ++.|++|+.|
T Consensus 12 ~~g~~~p~~~l~---~~~g~~~~l~~~~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 12 EVLEREASFSLT---TIDGEVISLNNVGGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHCCCEE---BTTSCEECGGGCCSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred cccCcCCCCEee---cCCCCEeeHHHhCCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 578899999998 4599999999999999999999 9999999999999999999987 8999999997
Q ss_pred -----------CHHhHHHHhcCccccCCCCCc-ceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 314 -----------SHFTHLAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 314 -----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
+++..++|.+++ ++ +|+++.| ++.+.+.|++ ..+|++||||++|+|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d-~~~~~~~~~v------~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANY-------GDPSWIMVMD-DGSLVEKFNV------RSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHH-------SCTTSEEEEC-CSHHHHHTTC------CSSSEEEEEETTCCEEE
T ss_pred ccccccCCCCCCHHHHHHHHHHc-------CCCCeeEEeC-hHHHHHHhCC------CCceEEEEEcCCCcEEE
Confidence 677888888876 78 9999999 9999999999 68899999999999998
No 177
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=173.02 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=98.0
Q ss_pred CCCCCCccEEEeeecCc-cceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC--------
Q psy17178 53 LSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-------- 123 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~-g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d-------- 123 (384)
....+|+|++++. + |++++|++++||++||+|| ++|||+| .|+|.|++++++|+++|++||+|+.|
T Consensus 13 ~~~~~pdF~l~d~---~~G~~v~Ls~~kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~ 87 (207)
T 2r37_A 13 ISGTIYEYGALTI---DGEEYIPFKQYAGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPG 87 (207)
T ss_dssp --CCGGGCEEEBT---TSSCEEEGGGGTTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCS
T ss_pred ccCccCCeEeeeC---CCCCEEcHHHhCCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCC
Confidence 5578999999877 8 9999999999999999999 9999999 79999999999999999999999964
Q ss_pred CHHhHHhhccCcc---ccCCCCccceeEEeeCc--chh-HHhhcCcccCC-------CC----------cccceeEEEEE
Q psy17178 124 SHFTHLAWVNTPR---KEGGLGKLKIPLLSDLT--HKI-SLDYGVYLSDQ-------GP----------VRGSLLSTAIF 180 (384)
Q Consensus 124 ~~~~~~~~~~~~~---~~~~~~~~~~p~l~D~~--~~~-~~~ygv~~~~~-------g~----------~~g~~~~~~~~ 180 (384)
+.+.+++|++.++ ++ +++||+++|.+ +.. ...|+.+.... |. ..++...+++|
T Consensus 88 ~~~~i~~f~~~~~~~~~~----~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttf 163 (207)
T 2r37_A 88 ENSEILPTLKYVRPGGGF----VPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKF 163 (207)
T ss_dssp CHHHHHHHHHHTSSCTTC----CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEE
T ss_pred CHHHHHHHHHhcchhhcc----CccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEE
Confidence 3567788876110 22 78999998643 432 22333221100 00 00111224679
Q ss_pred EEecCCCcccccceee
Q psy17178 181 VYALTSPVNGYAGGAL 196 (384)
Q Consensus 181 vid~~G~v~~~~~g~~ 196 (384)
|||++|+|+....|..
T Consensus 164 lID~~G~i~~~~~g~~ 179 (207)
T 2r37_A 164 LVGPDGIPIMRWHHRT 179 (207)
T ss_dssp EECTTSCEEEEECTTS
T ss_pred EECCCCcEEEEECCCC
Confidence 9999999987765544
No 178
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.84 E-value=1.1e-20 Score=179.84 Aligned_cols=123 Identities=12% Similarity=-0.007 Sum_probs=112.2
Q ss_pred CCCCCCCCCCce-----eeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-
Q psy17178 240 IPFVSKPAPFWQ-----GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD- 313 (384)
Q Consensus 240 ~~~~g~~~P~f~-----l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d- 313 (384)
.+.+|..+|+|+ +. |.+|+++++++++||++||+|| ++||++|+.++|.|++++++|+++++.|++|+.|
T Consensus 50 ~l~vG~~aPdF~~~~~wL~---d~dG~~vsLsdl~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLN---TPGNKPIDLKSLRGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPE 125 (352)
T ss_dssp SCCCCCBCCCCCSCCEEES---SGGGCCCCGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred ccCCCCcCCCccccccccC---CCCCCEEcHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 357899999999 66 5599999999999999999999 9999999999999999999999889999999975
Q ss_pred -----CHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 314 -----SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 314 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++..++|++++ +++||++.|.+..+.+.|++ ..+|++||||++|+|++.+..
T Consensus 126 ~~~~d~~~~~~~~~~~~-------~l~fpv~~D~~~~l~~~ygV------~~~Pt~~lID~~G~Iv~~~~G 183 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANL-------GISYPIALDNNYATWTNYRN------RYWPAEYLIDATGTVRHIKFG 183 (352)
T ss_dssp SGGGGCHHHHHHHHHHH-------TCCSCEEECTTSHHHHHTTC------CEESEEEEECTTSBEEEEEES
T ss_pred ccccCCHHHHHHHHHHc-------CCCccEEeCCcHHHHHHcCC------CccCEEEEEeCCCeEEEEEcC
Confidence 577888888876 88999999999999999999 689999999999999997753
No 179
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.84 E-value=1.9e-20 Score=165.06 Aligned_cols=127 Identities=18% Similarity=0.176 Sum_probs=103.8
Q ss_pred CCCCCC--CCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcC-chHhHHHHHHHHHHHHh---CCcEEEEEeCC--
Q psy17178 242 FVSKPA--PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ---INTEVVAASVD-- 313 (384)
Q Consensus 242 ~~g~~~--P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~-C~~~~~~l~~l~~~~~~---~~v~vv~Is~d-- 313 (384)
.+|+.+ |+|+++ |.+|+++++++++||++||+|| ++|||+ |+.++|.|+++++++++ .+++|++||+|
T Consensus 14 ~~g~~~~~p~f~l~---d~~G~~v~l~~~~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~ 89 (200)
T 2b7k_A 14 GYGKPSLGGPFHLE---DMYGNEFTEKNLLGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPA 89 (200)
T ss_dssp --CCCCCCCCCEEE---ETTSCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTT
T ss_pred ccCCCCcCCCEEEE---cCCCCEEeHHHcCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCC
Confidence 467775 999998 5599999999999999999999 999997 99999999999999985 38999999998
Q ss_pred --CHHhHHHHhcCccccCCCCCcceeEEecC---chHHHHHhCcee-cC----CC-----ceeeEEEEEeCCceEEEEEe
Q psy17178 314 --SHFTHLAWVNTPRKEGGLGKLKIPLLSDL---THKISLDYGVYL-SD----QG-----HTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~-~~----~~-----~~~p~~~lId~~G~i~~~~~ 378 (384)
+++.+++|++++ +.+|+.+.+. .+.+++.||+.. .+ .+ .+.|++||||++|+|++.+.
T Consensus 90 ~d~~~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~ 162 (200)
T 2b7k_A 90 RDSPAVLKEYLSDF-------HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALG 162 (200)
T ss_dssp TCCHHHHHHHHTTS-------CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHHc-------CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeC
Confidence 578889999876 6788888643 478899999862 11 01 25678999999999999875
Q ss_pred c
Q psy17178 379 R 379 (384)
Q Consensus 379 ~ 379 (384)
.
T Consensus 163 g 163 (200)
T 2b7k_A 163 R 163 (200)
T ss_dssp T
T ss_pred C
Confidence 3
No 180
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.84 E-value=9.4e-21 Score=159.22 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=108.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC---CCHHh
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV---DSHFT 317 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~---d~~~~ 317 (384)
..+|+.+|+|+++ |.+|+.+++++++ |++||+|| ++||++|..+++.|+++++++ ++.+++|+. |+++.
T Consensus 5 l~~g~~~p~f~l~---~~~g~~~~l~~~~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~ 76 (154)
T 3ia1_A 5 VKPGEPLPDFLLL---DPKGQPVTPATVS-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREV 76 (154)
T ss_dssp CCSBEECCCCCEE---CTTSCEECTTTSC-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHH
T ss_pred CCCCCcCCceEEE---CCCCCEechHHcC-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHH
Confidence 4689999999998 5599999999999 99999999 999999999999999999999 799999999 77888
Q ss_pred HHHHhcCccccCCCCCcceeEEec---CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSD---LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++|++++ +++|+++.| ....+.+.||+ ..+|++||||++|+|++.+..
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 128 (154)
T 3ia1_A 77 VLEYMKTY-------PRFIPLLASDRDRPHEVAARFKV------LGQPWTFVVDREGKVVALFAG 128 (154)
T ss_dssp HHHHHTTC-------TTEEECBCCSSCCHHHHHTTSSB------CSSCEEEEECTTSEEEEEEES
T ss_pred HHHHHHHc-------CCCcccccccccchHHHHHHhCC------CcccEEEEECCCCCEEEEEcC
Confidence 88998877 889999998 66899999999 688999999999999997764
No 181
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.84 E-value=2e-21 Score=163.03 Aligned_cols=121 Identities=12% Similarity=0.086 Sum_probs=99.2
Q ss_pred CCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccC
Q psy17178 55 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNT 134 (384)
Q Consensus 55 ~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~ 134 (384)
-++|+|++. . +|++++|++++||++||+|| ++|||+|+.++|.|+++++++++.++++++|+.|+.+..++|.+.
T Consensus 3 ~pa~~~~~~-~---~G~~~~l~~~~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 77 (151)
T 3raz_A 3 LSADELAGW-K---DNTPQSLQSLKAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQ 77 (151)
T ss_dssp ----CEEET-T---TCCEECGGGCCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHH
T ss_pred CCcchhhcc-c---CCCEecHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHH
Confidence 345555542 3 89999999999999999999 999999999999999999999888999999999999999999885
Q ss_pred ccccCCCCccceeEEeeCc---chhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 135 PRKEGGLGKLKIPLLSDLT---HKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 135 ~~~~~~~~~~~~p~l~D~~---~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
. +++||++.|.. .++++.||... ...|++||||++|+|+....|..
T Consensus 78 ~-------~~~~~~~~~~~~~~~~~~~~~~~~v---------~~~P~~~lid~~G~i~~~~~g~~ 126 (151)
T 3raz_A 78 T-------PVSYPIWRYTGANSRNFMKTYGNTV---------GVLPFTVVEAPKCGYRQTITGEV 126 (151)
T ss_dssp S-------CCSSCEEEECCSCHHHHHHTTTCCS---------CCSSEEEEEETTTTEEEECCSCC
T ss_pred c-------CCCCceEecCccchHHHHHHhCCcc---------CCCCEEEEECCCCcEEEEECCCC
Confidence 3 88999998874 46788888211 22357899999999987777665
No 182
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.84 E-value=2.1e-20 Score=159.84 Aligned_cols=128 Identities=16% Similarity=0.175 Sum_probs=104.7
Q ss_pred CccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCC-chHHHHHHHHhHHHHHh----CCcEEEEEeCCC----HHhH
Q psy17178 58 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFV-CPTEILAFNDRLEEFHQ----INTEVVAASVDS----HFTH 128 (384)
Q Consensus 58 P~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~-C~~~~~~l~~~~~~~~~----~~v~vi~Vs~d~----~~~~ 128 (384)
|+|++.+. +|++++|++++||++||+|| ++|||+ |+.++|.|++++++|++ .++++++||.|+ ++.+
T Consensus 7 p~f~l~~~---~G~~~~l~~~~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDH---RGRARCKADFRGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAM 82 (171)
T ss_dssp SCCEEEET---TSCEEETTTTTTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHH
T ss_pred CCeEEEeC---CCCEEeHHHhCCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHH
Confidence 99999877 99999999999999999999 999997 99999999999999975 589999999984 6777
Q ss_pred HhhccCccccCCCCccceeEEeeCc---chhHHhhcCcccCCCC----cccceeEEEEEEEecCCCcccccceee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLT---HKISLDYGVYLSDQGP----VRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~---~~~~~~ygv~~~~~g~----~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
++|.+.+ +++|+++.|.. ++++++||+...+... ...+.+.+++||||++|+|+....|..
T Consensus 83 ~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~ 150 (171)
T 2rli_A 83 ARYVQDF-------HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR 150 (171)
T ss_dssp HHHHHTT-------CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC
T ss_pred HHHHHHc-------CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC
Confidence 8887753 78899998754 5799999996543111 122334568999999999997765543
No 183
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.5e-22 Score=171.34 Aligned_cols=124 Identities=19% Similarity=0.180 Sum_probs=108.9
Q ss_pred CCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHH-HHHHHH-hCCcEEEEEeCCCH-H
Q psy17178 240 IPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND-RLEEFH-QINTEVVAASVDSH-F 316 (384)
Q Consensus 240 ~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~-l~~~~~-~~~v~vv~Is~d~~-~ 316 (384)
.+.+|+.+|+|+++++ +|+.+++++++||++||+|| ++||++|+.++|.|++ ++++++ +.++.+++|+.|+. +
T Consensus 6 ~l~~g~~~p~f~l~~~---~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~ 81 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLT---DGKQVTLSSLRGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLE 81 (159)
Confidence 3468999999999855 99999999999999999999 9999999999999999 999998 78899999999864 4
Q ss_pred hHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 317 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..++|.+++ +++||++.|+++.+.+.||+.. ...|++||||++|+|++.+.
T Consensus 82 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~----~~~P~~~lid~~G~i~~~~~ 132 (159)
T 2ls5_A 82 KVLAFAKST-------GVTYPLGLDPGADIFAKYALRD----AGITRNVLIDREGKIVKLTR 132 (159)
Confidence 567777765 7899999999999999999621 35899999999999998765
No 184
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.84 E-value=2.5e-20 Score=152.48 Aligned_cols=116 Identities=18% Similarity=0.221 Sum_probs=103.0
Q ss_pred CCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEe------CCCHHhHH
Q psy17178 246 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS------VDSHFTHL 319 (384)
Q Consensus 246 ~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is------~d~~~~~~ 319 (384)
++|+|+++ |.+|+.+++++++||++||+|| ++||+.|..+++.|+++++++ +.++.+++|+ .++.+..+
T Consensus 1 ~~p~f~l~---~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~~ 75 (138)
T 4evm_A 1 EVADFELM---GVDGKTYRLSDYKGKKVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADFK 75 (138)
T ss_dssp CCCCCEEE---BTTSCEEEGGGGTTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHHH
T ss_pred CCCcceeE---CCCCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHHH
Confidence 47999998 5599999999999999999999 999999999999999999984 4579999993 45677888
Q ss_pred HHhcCccccCCCCCc-ceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|.+.+ ++ +|+++.|.++.+.+.||+ ...|+++|||++|+|++.+..
T Consensus 76 ~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 123 (138)
T 4evm_A 76 NWYKGL-------DYKNLPVLVDPSGKLLETYGV------RSYPTQAFIDKEGKLVKTHPG 123 (138)
T ss_dssp HHHTTC-------CCTTCCEEECTTCHHHHHTTC------CSSSEEEEECTTCCEEEEEES
T ss_pred HHHhhc-------CCCCeeEEECcchHHHHHcCc------ccCCeEEEECCCCcEEEeecC
Confidence 888776 66 999999999999999999 688999999999999998764
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.8e-22 Score=170.93 Aligned_cols=126 Identities=17% Similarity=0.132 Sum_probs=108.9
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHH-hHHHHH-hCCcEEEEEeCCCH-H
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFND-RLEEFH-QINTEVVAASVDSH-F 126 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~-~~~~~~-~~~v~vi~Vs~d~~-~ 126 (384)
.+++|+++|+|++.+. +|+++++++++||+++|+|| ++|||+|+.++|.|++ ++++++ +.++.+++|+.|+. +
T Consensus 6 ~l~~g~~~p~f~l~~~---~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~ 81 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLT---DGKQVTLSSLRGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLE 81 (159)
Confidence 4679999999999887 99999999999999999999 9999999999999998 999998 77899999998864 4
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
..++|.+.. +++||++.|.++++++.||+.. ...|++++||++|+|+....|.
T Consensus 82 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~---------~~~P~~~lid~~G~i~~~~~g~ 134 (159)
T 2ls5_A 82 KVLAFAKST-------GVTYPLGLDPGADIFAKYALRD---------AGITRNVLIDREGKIVKLTRLY 134 (159)
Confidence 566776643 7899999999999999999732 1246789999999999877663
No 186
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.83 E-value=2e-21 Score=165.53 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=105.4
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC------
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------ 123 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d------ 123 (384)
.+++|+++|+|++.+. +|+.+++++++||++||+|| ++|||+|+.++|.|.+++++++ ++.+++|+.|
T Consensus 10 ~~~~g~~~p~~~l~~~---~g~~~~l~~~~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~ 83 (165)
T 3ha9_A 10 SEEVLEREASFSLTTI---DGEVISLNNVGGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALK 83 (165)
T ss_dssp HHHHHHHHHCCCEEBT---TSCEECGGGCCSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHH
T ss_pred cccccCcCCCCEeecC---CCCEeeHHHhCCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccc
Confidence 4568999999999887 99999999999999999999 9999999999999999999987 8999999997
Q ss_pred -------------CHHhHHhhccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 124 -------------SHFTHLAWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 124 -------------~~~~~~~~~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
+.+..++|.+.. ++ +||++.| ++++++.||+. ..|+++|||++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d-~~~~~~~~~v~-----------~~P~~~lid~~G~i~ 144 (165)
T 3ha9_A 84 ALGLNKPGYPPPDTPEMFRKFIANY-------GDPSWIMVMD-DGSLVEKFNVR-----------SIDYIVIMDKSSNVL 144 (165)
T ss_dssp HHTCCSTTSCCCCCHHHHHHHHHHH-------SCTTSEEEEC-CSHHHHHTTCC-----------SSSEEEEEETTCCEE
T ss_pred ccccccccCCCCCCHHHHHHHHHHc-------CCCCeeEEeC-hHHHHHHhCCC-----------CceEEEEEcCCCcEE
Confidence 567777777743 77 9999999 99999999982 235789999999998
Q ss_pred cccceee
Q psy17178 190 GYAGGAL 196 (384)
Q Consensus 190 ~~~~g~~ 196 (384)
. .|..
T Consensus 145 ~--~g~~ 149 (165)
T 3ha9_A 145 Y--AGTT 149 (165)
T ss_dssp E--EEES
T ss_pred E--eCCC
Confidence 6 4443
No 187
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.83 E-value=3.7e-21 Score=160.03 Aligned_cols=122 Identities=15% Similarity=0.211 Sum_probs=105.9
Q ss_pred ccCCCCCCccEE--EeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-----
Q psy17178 51 KNLSKPAPFWQG--TAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD----- 123 (384)
Q Consensus 51 ~~~G~~aP~f~l--~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d----- 123 (384)
+++|+++|+|++ .+. +|+.+++++++||++||.|| ++|||+|+.++|.|++++++++++ +.+++|+.|
T Consensus 1 l~~g~~~P~f~~~~~~~---~g~~~~~~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~ 75 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWL---NGEVTREQLIGEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDD 75 (148)
T ss_dssp CCTTCBCCCCCCCSEEE---SCCCCHHHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTT
T ss_pred CCCCCCCCCCccccccc---cCcccchhhcCCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccc
Confidence 468999999998 566 89999999999999999999 999999999999999999999876 999999987
Q ss_pred -CHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 124 -SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 124 -~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+.+..++|.+. + +++||++.|..+++++.||+. ..|+++++|++|+++....|.
T Consensus 76 ~~~~~~~~~~~~---~----~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~ 130 (148)
T 2b5x_A 76 LDPGKIKETAAE---H----DITQPIFVDSDHALTDAFENE-----------YVPAYYVFDKTGQLRHFQAGG 130 (148)
T ss_dssp SSHHHHHHHHHH---T----TCCSCEEECSSCHHHHHTCCC-----------CSSEEEEECTTCBEEEEEESC
T ss_pred cCHHHHHHHHHH---c----CCCcceEECCchhHHHHhCCC-----------CCCEEEEECCCCcEEEEecCC
Confidence 46677777764 3 789999999999999999982 245788999999998766554
No 188
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=2.7e-20 Score=155.98 Aligned_cols=121 Identities=18% Similarity=0.199 Sum_probs=106.3
Q ss_pred CCCCCCCC-CceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC-HHhH
Q psy17178 241 PFVSKPAP-FWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTH 318 (384)
Q Consensus 241 ~~~g~~~P-~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~ 318 (384)
..+|+.+| +|+++++ +|+.+++++++||++||+|| ++||+.|..+++.|++++++++++++.+++|+.|+ .+..
T Consensus 3 l~~G~~~p~~f~l~~~---~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 78 (152)
T 2lja_A 3 LRSGNPSAASFSYPDI---NGKTVSLADLKGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAW 78 (152)
T ss_dssp TTTTCCCSSSCEEEET---TTEEEESTTTTTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHH
T ss_pred cccCCCCCcccEeecC---CCCEeeHHHcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHH
Confidence 35799999 9999854 99999999999999999999 99999999999999999999988889999999985 4567
Q ss_pred HHHhcCccccCCCCCcc-eeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
++|++.. +++ ++++.|.+..+.+.||+ ..+|+++|||++|+|++.+.
T Consensus 79 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~ 126 (152)
T 2lja_A 79 ENMVTKD-------QLKGIQLHMGTDRTFMDAYLI------NGIPRFILLDRDGKIISANM 126 (152)
T ss_dssp HHHHHHH-------TCCSEEEECSSCTHHHHHTTC------CSSCCEEEECTTSCEEESSC
T ss_pred HHHHHhc-------CCCCceeecCcchhHHHHcCc------CCCCEEEEECCCCeEEEccC
Confidence 7777765 444 56777888999999999 68899999999999999654
No 189
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.1e-20 Score=179.85 Aligned_cols=126 Identities=14% Similarity=0.069 Sum_probs=110.4
Q ss_pred ccccCCCCCCccE-----EEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 49 YSKNLSKPAPFWQ-----GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 49 ~~~~~G~~aP~f~-----l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
..+.+|+++|+|+ +.+. +|++++|++++||++||+|| ++|||+|+.++|.|++++++|+++++++++|+.|
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~---dG~~vsLsdl~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTP---GNKPIDLKSLRGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSG---GGCCCCGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cccCCCCcCCCccccccccCCC---CCCEEcHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 4578999999999 7666 99999999999999999999 8999999999999999999999889999999975
Q ss_pred ------CHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 124 ------SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 124 ------~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+++..++|.+. + +++||++.|.+.++++.|++ ...|++||||++|+|+....|..
T Consensus 125 ~~~~~d~~~~~~~~~~~---~----~l~fpv~~D~~~~l~~~ygV-----------~~~Pt~~lID~~G~Iv~~~~G~~ 185 (352)
T 2hyx_A 125 EYAFEKVPGNVAKGAAN---L----GISYPIALDNNYATWTNYRN-----------RYWPAEYLIDATGTVRHIKFGEG 185 (352)
T ss_dssp SSGGGGCHHHHHHHHHH---H----TCCSCEEECTTSHHHHHTTC-----------CEESEEEEECTTSBEEEEEESBC
T ss_pred cccccCCHHHHHHHHHH---c----CCCccEEeCCcHHHHHHcCC-----------CccCEEEEEeCCCeEEEEEcCCC
Confidence 46677777764 3 78999999999999999998 23467899999999987766643
No 190
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.83 E-value=3e-20 Score=152.33 Aligned_cols=114 Identities=13% Similarity=0.102 Sum_probs=104.2
Q ss_pred CCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC-HHhHHHHhc
Q psy17178 245 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHLAWVN 323 (384)
Q Consensus 245 ~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~~~~~~ 323 (384)
..+|+|+++ |.+|+.+++++++||+++|+|| ++||++|..+++.|++++++++ ++.+++|+.|+ ++..++|++
T Consensus 2 ~~~p~~~l~---~~~g~~~~l~~~~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 2 DERLQFTAT---TLSGAPFDGASLQGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp GGGGCCEEE---BTTSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCCeEee---cCCCCeecHHHhCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHH
Confidence 357999998 5599999999999999999999 9999999999999999999986 89999999976 788888888
Q ss_pred CccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 324 TPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 324 ~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
++ +++|+++.|.+..+.+.||+ ...|+++++|++|+|+ .+.
T Consensus 76 ~~-------~~~~~~~~d~~~~~~~~~~i------~~~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 76 KY-------NLNFTNLNDADGVIWARYNV------PWQPAFVFYRADGTST-FVN 116 (136)
T ss_dssp HH-------TCCSEEEECTTSHHHHHTTC------CSSSEEEEECTTSCEE-EEC
T ss_pred Hc-------CCCceEEECCchhHHHhcCC------CCCCEEEEECCCCcEE-EEE
Confidence 76 88999999999999999999 6889999999999999 555
No 191
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.82 E-value=4.5e-21 Score=161.16 Aligned_cols=121 Identities=20% Similarity=0.222 Sum_probs=106.5
Q ss_pred cccCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC---CCHH
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV---DSHF 126 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~---d~~~ 126 (384)
.+.+|+++|+|++.+. +|+.+++++++ |++||+|| ++|||+|+.+++.|+++++++ ++++++|+. |+.+
T Consensus 4 ~l~~g~~~p~f~l~~~---~g~~~~l~~~~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~ 75 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDP---KGQPVTPATVS-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTRE 75 (154)
T ss_dssp CCCSBEECCCCCEECT---TSCEECTTTSC-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHH
T ss_pred cCCCCCcCCceEEECC---CCCEechHHcC-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHH
Confidence 5679999999999877 99999999999 99999999 999999999999999999999 899999999 6677
Q ss_pred hHHhhccCccccCCCCccceeEEee---CcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSD---LTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D---~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..++|.+.. +++||++.| ...++++.||+. ..|++|+||++|+|+....|..
T Consensus 76 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 130 (154)
T 3ia1_A 76 VVLEYMKTY-------PRFIPLLASDRDRPHEVAARFKVL-----------GQPWTFVVDREGKVVALFAGRA 130 (154)
T ss_dssp HHHHHHTTC-------TTEEECBCCSSCCHHHHHTTSSBC-----------SSCEEEEECTTSEEEEEEESBC
T ss_pred HHHHHHHHc-------CCCcccccccccchHHHHHHhCCC-----------cccEEEEECCCCCEEEEEcCCC
Confidence 788888753 789999998 668899999982 3467899999999987776654
No 192
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.82 E-value=4.6e-20 Score=150.95 Aligned_cols=115 Identities=12% Similarity=0.110 Sum_probs=104.2
Q ss_pred CCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC-HHhHHHHh
Q psy17178 244 SKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHLAWV 322 (384)
Q Consensus 244 g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~~~~~ 322 (384)
|..+|+|+++ +.+|+.+++++++||+++|+|| ++||+.|..+++.|++++++++ ++.+++|+.|+ .+..++|.
T Consensus 2 ~~~~p~~~~~---~~~g~~~~l~~~~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 75 (136)
T 1zzo_A 2 VPAQLQFSAK---TLDGHDFHGESLLGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFV 75 (136)
T ss_dssp CCGGGCCEEE---BTTSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHH
T ss_pred CCCCCCcccc---cCCCCEeeHHHhCCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHH
Confidence 5679999998 4599999999999999999999 9999999999999999999986 89999999874 77888888
Q ss_pred cCccccCCCCCc-ceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 323 NTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 323 ~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+++ ++ +|+++.|.+..+.+.||+ ..+|+++++|++|+|+ .+.
T Consensus 76 ~~~-------~~~~~~~~~d~~~~~~~~~~i------~~~P~~~~id~~g~i~-~~~ 118 (136)
T 1zzo_A 76 NKY-------PVKTFTQLADTDGSVWANFGV------TQQPAYAFVDPHGNVD-VVR 118 (136)
T ss_dssp HHT-------TCTTSEEEECTTCHHHHHTTC------CSSSEEEEECTTCCEE-EEE
T ss_pred HHc-------CCCceEEEEcCCcHHHHHcCC------CCCceEEEECCCCCEE-EEe
Confidence 876 77 999999999999999999 6899999999999998 554
No 193
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.82 E-value=1.7e-20 Score=156.42 Aligned_cols=120 Identities=18% Similarity=0.154 Sum_probs=102.6
Q ss_pred CCCCCCCC-ceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeCC-CHHhH
Q psy17178 242 FVSKPAPF-WQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVD-SHFTH 318 (384)
Q Consensus 242 ~~g~~~P~-f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d-~~~~~ 318 (384)
.+|+.+|+ |++.+ .+| .+++++++||++||+|| ++||++|+.++|.|+++++++++ .++.|++|+.| +.+..
T Consensus 3 ~~~~~~P~~f~l~~---~~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~ 77 (146)
T 1o8x_A 3 GLDKYLPGIEKLRR---GDG-EVEVKSLAGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGF 77 (146)
T ss_dssp CGGGTSTTCCEEEE---TTE-EEEGGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHH
T ss_pred chHhhCCCceEEEc---CCC-CCcHHHhCCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHH
Confidence 35788999 99985 499 99999999999999999 99999999999999999999984 68999999998 46778
Q ss_pred HHHhcCccccCCCCCcceeEEe-cCchHHHHHhCceecCCCceeeEEEEEe-CCceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGHTLDKYCLEC-YKMVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~~~~~~p~~~lId-~~G~i~~~~~ 378 (384)
++|++++. ...+++.. |....+.+.||+ ..+|+++||| ++|+|++.+.
T Consensus 78 ~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v------~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 78 AGYFAKMP------WLAVPFAQSEAVQKLSKHFNV------ESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHTTCS------SEECCGGGHHHHHHHHHHTTC------CSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHCC------ceeeccchhhHHHHHHHHhCC------CCCCEEEEEECCCCeEEEecc
Confidence 88887651 24566554 556889999999 6899999999 9999998654
No 194
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.82 E-value=1.7e-20 Score=156.06 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=101.3
Q ss_pred CCCCCCc-cEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh-CCcEEEEEeCCC-HHhHH
Q psy17178 53 LSKPAPF-WQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDS-HFTHL 129 (384)
Q Consensus 53 ~G~~aP~-f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~-~~v~vi~Vs~d~-~~~~~ 129 (384)
+|+.+|+ |++.+. +|+++++++++||++||+|| ++|||+|+.++|.|+++++++++ .++++++|+.|. .+..+
T Consensus 3 ~~~~~P~~f~l~~~---~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~ 78 (144)
T 1i5g_A 3 LKKFFPYSTNVLKG---AAADIALPSLAGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFK 78 (144)
T ss_dssp TTTSCSSCSEEEET---TEEEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHH
T ss_pred hhhhCCCceEEEcC---CCCEecHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHH
Confidence 6899999 999887 99999999999999999999 89999999999999999999985 689999999984 67778
Q ss_pred hhccCccccCCCCccceeEEe-eCcchhHHhhcCcccCCCCcccceeEEEEEEEe-cCCCcccccce
Q psy17178 130 AWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYA-LTSPVNGYAGG 194 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~p~l~-D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid-~~G~v~~~~~g 194 (384)
+|.+.+ +-..+|++. |...++++.||+. ..|+++++| ++|+|+....+
T Consensus 79 ~~~~~~------~~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~~G~i~~~~~~ 128 (144)
T 1i5g_A 79 DYYAKM------PWLALPFEDRKGMEFLTTGFDVK-----------SIPTLVGVEADSGNIITTQAR 128 (144)
T ss_dssp HHHTTC------SSEECCTTCHHHHHHHHHHTTCC-----------SSSEEEEEETTTCCEEESCHH
T ss_pred HHHHhC------CccccccCchHHHHHHHHHcCCC-----------CCCEEEEEECCCCcEEeccch
Confidence 887753 123566555 6668899999982 235788999 99999865543
No 195
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.81 E-value=5.2e-20 Score=150.57 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=100.4
Q ss_pred CCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEe------CCCHHhHH
Q psy17178 56 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS------VDSHFTHL 129 (384)
Q Consensus 56 ~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs------~d~~~~~~ 129 (384)
++|+|++.+. +|+++++++++||++||+|| ++|||+|+.+++.|+++++++ ..++.+++|+ .++.+..+
T Consensus 1 ~~p~f~l~~~---~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~~ 75 (138)
T 4evm_A 1 EVADFELMGV---DGKTYRLSDYKGKKVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADFK 75 (138)
T ss_dssp CCCCCEEEBT---TSCEEEGGGGTTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHHH
T ss_pred CCCcceeECC---CCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHHH
Confidence 5899999877 99999999999999999999 999999999999999999984 4579999993 34567777
Q ss_pred hhccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 130 AWVNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+|.+.. ++ +||++.|.++++++.||+. ..|+++++|++|+|+....|..
T Consensus 76 ~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~g~~ 125 (138)
T 4evm_A 76 NWYKGL-------DYKNLPVLVDPSGKLLETYGVR-----------SYPTQAFIDKEGKLVKTHPGFM 125 (138)
T ss_dssp HHHTTC-------CCTTCCEEECTTCHHHHHTTCC-----------SSSEEEEECTTCCEEEEEESCC
T ss_pred HHHhhc-------CCCCeeEEECcchHHHHHcCcc-----------cCCeEEEECCCCcEEEeecCCC
Confidence 777643 66 8999999999999999982 2357889999999987766654
No 196
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.81 E-value=5.7e-20 Score=150.39 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=103.5
Q ss_pred CCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhHHhh
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHLAW 131 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~~~~ 131 (384)
+|.++|+|++.+. +|+.+++++++||+++|.|| ++|||+|+.+++.|++++++++ ++.+++|+.|+ .+..++|
T Consensus 1 ~~~~~p~~~~~~~---~g~~~~l~~~~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~ 74 (136)
T 1zzo_A 1 TVPAQLQFSAKTL---DGHDFHGESLLGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEF 74 (136)
T ss_dssp CCCGGGCCEEEBT---TSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHH
T ss_pred CCCCCCCcccccC---CCCEeeHHHhCCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHH
Confidence 4678999999887 99999999999999999999 9999999999999999999986 89999999876 6777777
Q ss_pred ccCccccCCCCcc-ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 132 VNTPRKEGGLGKL-KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 132 ~~~~~~~~~~~~~-~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+.. ++ +||++.|.+.++++.||+. ..|+++++|++|+|+ ...|..
T Consensus 75 ~~~~-------~~~~~~~~~d~~~~~~~~~~i~-----------~~P~~~~id~~g~i~-~~~g~~ 121 (136)
T 1zzo_A 75 VNKY-------PVKTFTQLADTDGSVWANFGVT-----------QQPAYAFVDPHGNVD-VVRGRM 121 (136)
T ss_dssp HHHT-------TCTTSEEEECTTCHHHHHTTCC-----------SSSEEEEECTTCCEE-EEESCC
T ss_pred HHHc-------CCCceEEEEcCCcHHHHHcCCC-----------CCceEEEECCCCCEE-EEecCC
Confidence 7643 67 8999999999999999982 235788999999997 555543
No 197
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.81 E-value=5.3e-20 Score=150.81 Aligned_cols=114 Identities=15% Similarity=0.178 Sum_probs=101.2
Q ss_pred CCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC-HHhHHhhcc
Q psy17178 55 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS-HFTHLAWVN 133 (384)
Q Consensus 55 ~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~-~~~~~~~~~ 133 (384)
.++|+|++.+. +|+.+++++++||+++|.|| ++|||+|+.+++.|++++++++ ++.+++|+.|+ .+..++|.+
T Consensus 2 ~~~p~~~l~~~---~g~~~~l~~~~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 2 DERLQFTATTL---SGAPFDGASLQGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp GGGGCCEEEBT---TSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCCeEeecC---CCCeecHHHhCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHH
Confidence 35899999877 99999999999999999999 9999999999999999999986 89999999987 778888887
Q ss_pred CccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccc
Q psy17178 134 TPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAG 193 (384)
Q Consensus 134 ~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~ 193 (384)
.. +++||++.|.+.++++.||+. ..|+++++|++|+|+ ...
T Consensus 76 ~~-------~~~~~~~~d~~~~~~~~~~i~-----------~~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 76 KY-------NLNFTNLNDADGVIWARYNVP-----------WQPAFVFYRADGTST-FVN 116 (136)
T ss_dssp HH-------TCCSEEEECTTSHHHHHTTCC-----------SSSEEEEECTTSCEE-EEC
T ss_pred Hc-------CCCceEEECCchhHHHhcCCC-----------CCCEEEEECCCCcEE-EEE
Confidence 43 789999999999999999982 235788999999998 555
No 198
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.80 E-value=5.4e-20 Score=152.73 Aligned_cols=120 Identities=18% Similarity=0.143 Sum_probs=101.1
Q ss_pred CCCCCCCCc-eeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHH-hCCcEEEEEeCCC-HHhH
Q psy17178 242 FVSKPAPFW-QGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH-QINTEVVAASVDS-HFTH 318 (384)
Q Consensus 242 ~~g~~~P~f-~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~-~~~v~vv~Is~d~-~~~~ 318 (384)
.+|+.+|+| ++. |.+| .+++++++||++||+|| ++||++|+.++|.|++++++++ +.++.+++|+.|. .+..
T Consensus 3 ~~g~~~p~~~~l~---~~~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~ 77 (144)
T 1o73_A 3 GLAKYLPGATNLL---SKSG-EVSLGSLVGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDF 77 (144)
T ss_dssp GGGGTSCTTCCBB---CTTS-CBCSGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHH
T ss_pred chhhhCccceEee---cCCC-cCcHHHhCCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHH
Confidence 468899997 988 5599 99999999999999999 9999999999999999999998 4689999999985 5677
Q ss_pred HHHhcCccccCCCCCcceeEEe-cCchHHHHHhCceecCCCceeeEEEEEe-CCceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGHTLDKYCLEC-YKMVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~~~~~~p~~~lId-~~G~i~~~~~ 378 (384)
++|++++. ...+++.. |....+.+.||+ ..+|+++||| ++|+|++.+.
T Consensus 78 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v------~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 78 HDYYGKMP------WLALPFDQRSTVSELGKTFGV------ESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHTTCS------SEECCTTCHHHHHHHHHHHTC------CSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHhCC------ceEeeccchhHHHHHHHHcCC------CCCCEEEEEECCCCeEEecch
Confidence 77877641 23455443 556789999999 6899999999 9999998653
No 199
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.80 E-value=2.7e-19 Score=152.70 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=104.1
Q ss_pred CCCCCCCCCceeeeEEcCcceeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC-CHHhH
Q psy17178 241 PFVSKPAPFWQGTAVVDGQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHFTH 318 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d-~~~~~ 318 (384)
..+|+.+|+|+++++ +.+|+.++++++ +||++||+|| ++|||+|+.++|.|++++++ ++.+++|+.| +++..
T Consensus 22 ~~~G~~~P~f~l~~~-~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~ 95 (168)
T 2b1k_A 22 ALIGKPVPKFRLESL-DNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKA 95 (168)
T ss_dssp TTTTSBCCCCEEEES-SSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHH
T ss_pred cccCCcCCCeEeecc-cCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHH
Confidence 468999999999844 338999999985 9999999999 99999999999999998864 7999999975 56778
Q ss_pred HHHhcCccccCCCCCccee-EEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 319 LAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
++|.+.+ +++|+ ++.|.+..+++.||+ ..+|++|+||++|+|++.+..
T Consensus 96 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 144 (168)
T 2b1k_A 96 ISWLKEL-------GNPYALSLFDGDGMLGLDLGV------YGAPETFLIDGNGIIRYRHAG 144 (168)
T ss_dssp HHHHHHH-------CCCCSEEEEETTCHHHHHHTC------CSSSEEEEECTTSBEEEEEES
T ss_pred HHHHHHc-------CCCCceeeECcchHHHHHcCc------cccCEEEEECCCCeEEEEEeC
Confidence 8888776 78888 578989999999999 678999999999999997763
No 200
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.80 E-value=1.7e-20 Score=160.26 Aligned_cols=120 Identities=18% Similarity=0.102 Sum_probs=101.6
Q ss_pred CCCCCCCCc-eeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeCCC-HHhH
Q psy17178 242 FVSKPAPFW-QGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDS-HFTH 318 (384)
Q Consensus 242 ~~g~~~P~f-~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~-~~~~ 318 (384)
.+|+.+|+| +++ |.+| .+++++++||++||+|| ++||++|+.++|.|++++++|++ .++.|++|+.|. .+..
T Consensus 23 ~vG~~~P~f~~l~---~~~g-~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~ 97 (165)
T 3s9f_A 23 GVAKHLGEALKLR---KQAD-TADMDSLSGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDF 97 (165)
T ss_dssp HHHHHHHHTSCEE---ETTE-EECSGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHH
T ss_pred hhcccCCcceeee---cCCC-cccHHHcCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHH
Confidence 578899999 888 4599 99999999999999999 99999999999999999999986 689999999985 4677
Q ss_pred HHHhcCccccCCCCCcceeEEecCc-hHHHHHhCceecCCCceeeEEEEEeCC-ceEEEEEe
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLT-HKISLDYGVYLSDQGHTLDKYCLECYK-MVIVYWFE 378 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~gv~~~~~~~~~p~~~lId~~-G~i~~~~~ 378 (384)
++|+++.. ...+++..+.. ..+.+.|++ ..+|++||||++ |+|++...
T Consensus 98 ~~~~~~~~------~~~~~~~~~~~~~~l~~~~~v------~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 98 NAYYAKMP------WLSIPFANRNIVEALTKKYSV------ESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HHHHTTCS------SEECCTTCHHHHHHHHHHTTC------CSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHhCC------CcccccCchhHHHHHHHHcCC------CCCCEEEEEeCCCCEEEeccc
Confidence 78877641 23555554434 789999999 689999999998 99998544
No 201
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.80 E-value=1.3e-19 Score=152.34 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=102.9
Q ss_pred CCCCCCCCCceeeeEEcCcc--------eeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 241 PFVSKPAPFWQGTAVVDGQL--------KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 241 ~~~g~~~P~f~l~~l~d~~g--------~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
+.+|+.+|+|+++++ +| +.+++++++||++||+|| ++||++|..++|.|++++++ .++.+++|+.
T Consensus 8 ~~~g~~~p~f~l~~~---~g~~~~~~~~~~~~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~ 80 (156)
T 1kng_A 8 ALIGRPAPQTALPPL---EGLQADNVQVPGLDPAAFKGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGINY 80 (156)
T ss_dssp ----CBCCCCCBCCC---TTCEETTEECCCBCGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEEE
T ss_pred HHhCCCCCCceeeec---cCcccccccCceechHHhCCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEEC
Confidence 468999999999855 77 999999999999999999 99999999999999999875 4599999997
Q ss_pred C-CHHhHHHHhcCccccCCCCCccee-EEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 313 D-SHFTHLAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 313 d-~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
| +++..++|++.+ +++|+ ++.|....+++.||+ ..+|++|+||++|+|++.+..
T Consensus 81 ~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~~id~~G~i~~~~~g 136 (156)
T 1kng_A 81 KDAADNARRFLGRY-------GNPFGRVGVDANGRASIEWGV------YGVPETFVVGREGTIVYKLVG 136 (156)
T ss_dssp SCCHHHHHHHHHHH-------CCCCSEEEEETTSHHHHHTTC------CSSCEEEEECTTSBEEEEEES
T ss_pred CCCHHHHHHHHHHc-------CCCCceeeeCchhHHHHhcCc------CccCeEEEEcCCCCEEEEEeC
Confidence 5 567888888876 78899 888999999999999 688999999999999997753
No 202
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.80 E-value=5.1e-20 Score=153.55 Aligned_cols=122 Identities=18% Similarity=0.180 Sum_probs=100.8
Q ss_pred cCCCCCCc-cEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh-CCcEEEEEeCCC-HHhH
Q psy17178 52 NLSKPAPF-WQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDS-HFTH 128 (384)
Q Consensus 52 ~~G~~aP~-f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~-~~v~vi~Vs~d~-~~~~ 128 (384)
.+|+.+|+ |++.+. +| .+++++++||++||+|| ++|||+|+.++|.|+++++++++ .++++++|+.|. .+..
T Consensus 3 ~~~~~~P~~f~l~~~---~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~ 77 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRG---DG-EVEVKSLAGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGF 77 (146)
T ss_dssp CGGGTSTTCCEEEET---TE-EEEGGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHH
T ss_pred chHhhCCCceEEEcC---CC-CCcHHHhCCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHH
Confidence 46889999 999887 99 99999999999999999 89999999999999999999984 689999999985 6677
Q ss_pred HhhccCccccCCCCccceeEEe-eCcchhHHhhcCcccCCCCcccceeEEEEEEEe-cCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYA-LTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~-D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid-~~G~v~~~~~g~ 195 (384)
++|.+.. +...+|+.. |...++++.||+ .+ .|+++++| ++|+|+....+.
T Consensus 78 ~~~~~~~------~~~~~~~~~~d~~~~~~~~~~v--------~~---~Pt~~lid~~~G~i~~~~~~~ 129 (146)
T 1o8x_A 78 AGYFAKM------PWLAVPFAQSEAVQKLSKHFNV--------ES---IPTLIGVDADSGDVVTTRARA 129 (146)
T ss_dssp HHHHTTC------SSEECCGGGHHHHHHHHHHTTC--------CS---SSEEEEEETTTCCEEESCHHH
T ss_pred HHHHHHC------CceeeccchhhHHHHHHHHhCC--------CC---CCEEEEEECCCCeEEEecchh
Confidence 7777743 123566555 666889999998 22 35788999 999998665443
No 203
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.79 E-value=1.3e-19 Score=154.73 Aligned_cols=124 Identities=19% Similarity=0.262 Sum_probs=103.1
Q ss_pred ccccCCCCCCccEEEeeecCccceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC-CHH
Q psy17178 49 YSKNLSKPAPFWQGTAVVDGQLKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD-SHF 126 (384)
Q Consensus 49 ~~~~~G~~aP~f~l~~~~~~~g~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d-~~~ 126 (384)
..+.+|+++|+|++++. +.+|+.++++++ +||++||+|| ++|||+|+.++|.|++++++ ++.+++|+.| +.+
T Consensus 20 ~~~~~G~~~P~f~l~~~-~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~ 93 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESL-DNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQ 93 (168)
T ss_dssp CCTTTTSBCCCCEEEES-SSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHH
T ss_pred cccccCCcCCCeEeecc-cCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChH
Confidence 35579999999999764 336889999986 8999999999 99999999999999988764 8999999975 467
Q ss_pred hHHhhccCccccCCCCcccee-EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p-~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..++|.+.. +++|| ++.|.+.++++.||+. + .|++|+||++|+|+....|..
T Consensus 94 ~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~--------~---~P~~~lid~~G~i~~~~~g~~ 146 (168)
T 2b1k_A 94 KAISWLKEL-------GNPYALSLFDGDGMLGLDLGVY--------G---APETFLIDGNGIIRYRHAGDL 146 (168)
T ss_dssp HHHHHHHHH-------CCCCSEEEEETTCHHHHHHTCC--------S---SSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHc-------CCCCceeeECcchHHHHHcCcc--------c---cCEEEEECCCCeEEEEEeCCC
Confidence 777887643 78888 6789999999999982 2 356889999999987766654
No 204
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.79 E-value=6.9e-20 Score=155.43 Aligned_cols=118 Identities=8% Similarity=0.106 Sum_probs=101.3
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC------CHH
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD------SHF 316 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------~~~ 316 (384)
+|+.+| +++ |.+|+.+++++++||++||+|| ++||++|+.++|.|++++++|++.++.|++|+.| +.+
T Consensus 16 ~~~~~p--~l~---~~~g~~~~~~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 16 VPHTMS--TMK---TADNRPASVYLKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp HHHHHT--TCE---ETTSSBGGGGCCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cCCcCC--ccC---CCCCCEeeHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 344455 555 5599999999999999999999 9999999999999999999998899999999974 345
Q ss_pred hHHHHhcCccccCCCCCcc-eeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 317 THLAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
..++|.+.+ +++ +++..|.+..+++.||+ ..+|++||||++|++++.+..
T Consensus 90 ~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~g 140 (164)
T 2h30_A 90 EFQKWYAGL-------NYPKLPVVTDNGGTIAQNLNI------SVYPSWALIGKDGDVQRIVKG 140 (164)
T ss_dssp HHHHHHTTS-------CCTTSCEEECTTCHHHHHTTC------CSSSEEEEECTTSCEEEEEES
T ss_pred HHHHHHHhC-------CCCcceEEEcCchHHHHHcCC------CccceEEEECCCCcEEEEEcC
Confidence 667776654 566 88999999999999999 689999999999999997753
No 205
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.78 E-value=2e-20 Score=159.79 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=100.3
Q ss_pred ccccCCCCCCcc-EEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh-CCcEEEEEeCCC-H
Q psy17178 49 YSKNLSKPAPFW-QGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDS-H 125 (384)
Q Consensus 49 ~~~~~G~~aP~f-~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~-~~v~vi~Vs~d~-~ 125 (384)
.+..+|+++|+| ++.+. +| +++|++++||++||+|| ++|||+|+.++|.|++++++|++ .++++++|+.|. .
T Consensus 20 ~~~~vG~~~P~f~~l~~~---~g-~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~ 94 (165)
T 3s9f_A 20 HMSGVAKHLGEALKLRKQ---AD-TADMDSLSGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEE 94 (165)
T ss_dssp --CHHHHHHHHTSCEEET---TE-EECSGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSH
T ss_pred hhhhhcccCCcceeeecC---CC-cccHHHcCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCH
Confidence 345689999999 99777 89 99999999999999999 99999999999999999999986 689999999986 4
Q ss_pred HhHHhhccCccccCCCCccceeEEeeCc-chhHHhhcCcccCCCCcccceeEEEEEEEecC-CCcccccce
Q psy17178 126 FTHLAWVNTPRKEGGLGKLKIPLLSDLT-HKISLDYGVYLSDQGPVRGSLLSTAIFVYALT-SPVNGYAGG 194 (384)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~p~l~D~~-~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~-G~v~~~~~g 194 (384)
+..++|.+.. +-..+|+..+.. .++++.||+. ..|+++|||++ |+|+....+
T Consensus 95 ~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~v~-----------~~Pt~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 95 DDFNAYYAKM------PWLSIPFANRNIVEALTKKYSVE-----------SIPTLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp HHHHHHHTTC------SSEECCTTCHHHHHHHHHHTTCC-----------SSSEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHHhC------CCcccccCchhHHHHHHHHcCCC-----------CCCEEEEEeCCCCEEEecccH
Confidence 6677777642 123555555444 7899999982 24578999998 999866543
No 206
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.78 E-value=1.2e-19 Score=152.63 Aligned_cols=122 Identities=14% Similarity=0.172 Sum_probs=100.3
Q ss_pred cccCCCCCCccEEEeeecCcc--------ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEe
Q psy17178 50 SKNLSKPAPFWQGTAVVDGQL--------KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS 121 (384)
Q Consensus 50 ~~~~G~~aP~f~l~~~~~~~g--------~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs 121 (384)
.+.+|+++|+|++++. +| +.+++++++||++||+|| ++|||+|..++|.|++++++ .++.+++|+
T Consensus 7 ~~~~g~~~p~f~l~~~---~g~~~~~~~~~~~~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 7 SALIGRPAPQTALPPL---EGLQADNVQVPGLDPAAFKGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp -----CBCCCCCBCCC---TTCEETTEECCCBCGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred hHHhCCCCCCceeeec---cCcccccccCceechHHhCCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 4579999999999887 77 899999999999999999 99999999999999998875 459999999
Q ss_pred CC-CHHhHHhhccCccccCCCCcccee-EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 122 VD-SHFTHLAWVNTPRKEGGLGKLKIP-LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 122 ~d-~~~~~~~~~~~~~~~~~~~~~~~p-~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.| +.+..++|.+.. +++|| ++.|...++++.||+. ..|++|++|++|+|+....|..
T Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~~id~~G~i~~~~~g~~ 138 (156)
T 1kng_A 80 YKDAADNARRFLGRY-------GNPFGRVGVDANGRASIEWGVY-----------GVPETFVVGREGTIVYKLVGPI 138 (156)
T ss_dssp ESCCHHHHHHHHHHH-------CCCCSEEEEETTSHHHHHTTCC-----------SSCEEEEECTTSBEEEEEESCC
T ss_pred CCCCHHHHHHHHHHc-------CCCCceeeeCchhHHHHhcCcC-----------ccCeEEEEcCCCCEEEEEeCCC
Confidence 75 467777887743 78999 8899999999999982 2357899999999987666654
No 207
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.77 E-value=1.2e-19 Score=150.54 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=99.2
Q ss_pred cCCCCCCcc-EEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHH-hCCcEEEEEeCCC-HHhH
Q psy17178 52 NLSKPAPFW-QGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH-QINTEVVAASVDS-HFTH 128 (384)
Q Consensus 52 ~~G~~aP~f-~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~-~~~v~vi~Vs~d~-~~~~ 128 (384)
.+|+.+|+| ++.+. +| .+++++++||++||+|| ++|||+|+.++|.|++++++++ +.++++++|+.|. .+..
T Consensus 3 ~~g~~~p~~~~l~~~---~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~ 77 (144)
T 1o73_A 3 GLAKYLPGATNLLSK---SG-EVSLGSLVGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDF 77 (144)
T ss_dssp GGGGTSCTTCCBBCT---TS-CBCSGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHH
T ss_pred chhhhCccceEeecC---CC-cCcHHHhCCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHH
Confidence 578999998 99776 99 99999999999999999 9999999999999999999998 4689999999986 5566
Q ss_pred HhhccCccccCCCCccceeEEe-eCcchhHHhhcCcccCCCCcccceeEEEEEEEe-cCCCccccccee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLS-DLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYA-LTSPVNGYAGGA 195 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~-D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid-~~G~v~~~~~g~ 195 (384)
++|.+.+ +...+|+.. |...++++.||+. ..|+++++| ++|+|+....+.
T Consensus 78 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~-----------~~Pt~~lid~~~G~i~~~~~~~ 129 (144)
T 1o73_A 78 HDYYGKM------PWLALPFDQRSTVSELGKTFGVE-----------SIPTLITINADTGAIIGTQART 129 (144)
T ss_dssp HHHHTTC------SSEECCTTCHHHHHHHHHHHTCC-----------SSSEEEEEETTTCCEEESCHHH
T ss_pred HHHHHhC------CceEeeccchhHHHHHHHHcCCC-----------CCCEEEEEECCCCeEEecchhh
Confidence 7777642 123455544 5567899999982 235788999 899998765443
No 208
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.64 E-value=2.4e-20 Score=154.48 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=99.3
Q ss_pred CCCCCceeeeEEcCcceeeeccc-cCCC-eEEEEEEeCCCCcCchHhHHHHHHHHHHHHh--CCcEEEEEeCC-CHHhHH
Q psy17178 245 KPAPFWQGTAVVDGQLKEIKLSD-YYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVD-SHFTHL 319 (384)
Q Consensus 245 ~~~P~f~l~~l~d~~g~~~~l~d-~~Gk-~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d-~~~~~~ 319 (384)
+.+|+|+++++ +|+.+++++ ++|| +++|+|| ++|||+|+.++|.|+++++++++ .++.+++|+.| +++..+
T Consensus 2 ~~~p~~~l~~~---~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~ 77 (143)
T 2lus_A 2 EFIQGIKLVKK---NRCEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMF 77 (143)
Confidence 45899999855 999999999 9999 9999999 99999999999999999999953 57999999998 456677
Q ss_pred HHhcCccccCCCCCcce---eEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 320 AWVNTPRKEGGLGKLKI---PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 320 ~~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++++ +++| ++..|..+.+.+.||+ ..+|+++|||++|+|++.+..
T Consensus 78 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v------~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 78 QYMMES-------HGDWLAIPYRSGPASNVTAKYGI------TGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 777665 4454 4455666889999999 689999999999999986543
No 209
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.76 E-value=1.7e-19 Score=153.06 Aligned_cols=120 Identities=8% Similarity=0.122 Sum_probs=98.6
Q ss_pred CCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC------HH
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS------HF 126 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~------~~ 126 (384)
+|+.+| ++.+. +|+++++++++||++||+|| ++|||+|+.++|.|++++++|+..++++++|+.|. .+
T Consensus 16 ~~~~~p--~l~~~---~g~~~~~~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 16 VPHTMS--TMKTA---DNRPASVYLKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp HHHHHT--TCEET---TSSBGGGGCCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cCCcCC--ccCCC---CCCEeeHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 445555 56566 89999999999999999999 99999999999999999999988999999999753 34
Q ss_pred hHHhhccCccccCCCCccc-eeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLK-IPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~-~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..++|.+. + +++ +++..|...++++.||+. + .|+++++|++|+++....|..
T Consensus 90 ~~~~~~~~---~----~~~~~~~~~d~~~~~~~~~~v~--------~---~P~~~lid~~G~i~~~~~g~~ 142 (164)
T 2h30_A 90 EFQKWYAG---L----NYPKLPVVTDNGGTIAQNLNIS--------V---YPSWALIGKDGDVQRIVKGSI 142 (164)
T ss_dssp HHHHHHTT---S----CCTTSCEEECTTCHHHHHTTCC--------S---SSEEEEECTTSCEEEEEESCC
T ss_pred HHHHHHHh---C----CCCcceEEEcCchHHHHHcCCC--------c---cceEEEECCCCcEEEEEcCCC
Confidence 45555543 2 566 899999999999999982 2 357889999999987766644
No 210
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.58 E-value=2.3e-19 Score=148.58 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=95.7
Q ss_pred CCCCccEEEeeecCccceEEccc-cCCC-eEEEEEeeCCCCCCchHHHHHHHHhHHHHHh--CCcEEEEEeCCC-HHhHH
Q psy17178 55 KPAPFWQGTAVVDGQLKEIKLSD-YYGK-YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVDS-HFTHL 129 (384)
Q Consensus 55 ~~aP~f~l~~~~~~~g~~~~l~~-~~gk-~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~--~~v~vi~Vs~d~-~~~~~ 129 (384)
+.+|+|++++. +|+++++++ ++|| +++|+|| ++|||+|+.++|.|+++++++++ .++.+++|+.|. ++..+
T Consensus 2 ~~~p~~~l~~~---~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~ 77 (143)
T 2lus_A 2 EFIQGIKLVKK---NRCEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMF 77 (143)
Confidence 45799999887 999999999 9999 9999999 89999999999999999999953 589999999985 45666
Q ss_pred hhccCccccCCCCccce---eEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccc
Q psy17178 130 AWVNTPRKEGGLGKLKI---PLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYA 192 (384)
Q Consensus 130 ~~~~~~~~~~~~~~~~~---p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~ 192 (384)
+|.+.. +++| ++..|..+++++.||+ ...|+++++|++|+|+...
T Consensus 78 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v-----------~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 78 QYMMES-------HGDWLAIPYRSGPASNVTAKYGI-----------TGIPALVIVKKDGTLISMN 125 (143)
Confidence 666543 4554 4556666889999998 2356789999999998764
No 211
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.68 E-value=1.4e-16 Score=143.77 Aligned_cols=185 Identities=11% Similarity=0.110 Sum_probs=116.2
Q ss_pred cCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCC--cEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcch
Q psy17178 78 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 155 (384)
Q Consensus 78 ~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~--v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 155 (384)
.+||+++|+|| ++||++|+..+|.+.++.+++++.+ +.++.|..|. ..+
T Consensus 30 ~~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~ 80 (241)
T 3idv_A 30 ADKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS----------------------------ASV 80 (241)
T ss_dssp TTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT----------------------------CHH
T ss_pred hcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC----------------------------CHH
Confidence 36899999999 9999999999999999999998765 6666665532 235
Q ss_pred hHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceeeeeccCCccceeeeeeechhhHHHHHHHHHHHHHHHHhhh
Q psy17178 156 ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGALYSRLGGRAWIRHCLLSACLVPVLVCATALVVNFIAMYYH 235 (384)
Q Consensus 156 ~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~wk~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
+++.||| ++++ ++++++ +|++.. ..| .+.. .. + . . ++ .. ..
T Consensus 81 l~~~~~v--------~~~P---t~~~~~-~g~~~~-~~g-------~~~~-~~-l---------~-~--~i----~~-~~ 121 (241)
T 3idv_A 81 LASRFDV--------SGYP---TIKILK-KGQAVD-YEG-------SRTQ-EE-I---------V-A--KV----RE-VS 121 (241)
T ss_dssp HHHHTTC--------CSSS---EEEEEE-TTEEEE-CCS-------CSCH-HH-H---------H-H--HH----HH-HH
T ss_pred HHHhcCC--------CcCC---EEEEEc-CCCccc-ccC-------cccH-HH-H---------H-H--HH----hh-cc
Confidence 7788888 3333 445554 565432 111 1110 00 0 0 0 00 00 00
Q ss_pred ccccCCCCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCC--cEEEEEeCC
Q psy17178 236 ASRAIPFVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASVD 313 (384)
Q Consensus 236 ~~~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d 313 (384)
.... ...|.. ...+ +++.+...--.+++++|+|| ++||++|+...|.+.++.+++++++ +.++.|+.+
T Consensus 122 ~~~~-----~~~~~~-~~~~---~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~ 191 (241)
T 3idv_A 122 QPDW-----TPPPEV-TLVL---TKENFDEVVNDADIILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT 191 (241)
T ss_dssp STTC-----CCCCCS-SEEC---CTTTHHHHHHHCSEEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT
T ss_pred Cccc-----cccccc-ceec---cHHHHHHhhccCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 0000 111111 1212 22222222225789999999 9999999999999999999997643 667766655
Q ss_pred CHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 314 SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
. +..+.+.||+ ..+|+.++++ +|+.+.
T Consensus 192 ~----------------------------~~~l~~~~~v------~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 192 A----------------------------ETDLAKRFDV------SGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp T----------------------------CHHHHHHTTC------CSSSEEEEEE-TTEEEE
T ss_pred C----------------------------CHHHHHHcCC------cccCEEEEEE-CCeEEE
Confidence 2 2347788998 6789888887 677765
No 212
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.58 E-value=5.3e-15 Score=127.11 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=105.7
Q ss_pred ccccCCCCCCc--cEEEeee----c------CccceEEcccc--CCCeEEEEEeeCCCCCCchH-HHHHHHHhHHHH-Hh
Q psy17178 49 YSKNLSKPAPF--WQGTAVV----D------GQLKEIKLSDY--YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEF-HQ 112 (384)
Q Consensus 49 ~~~~~G~~aP~--f~l~~~~----~------~~g~~~~l~~~--~gk~vvl~f~~~~~cp~C~~-~~~~l~~~~~~~-~~ 112 (384)
+...+|+++|. +++..+. + +.-+++++++. +||.|||+++|++++|.|.. ++|.+.+.++++ ++
T Consensus 24 ~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~ 103 (199)
T 4h86_A 24 MSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKE 103 (199)
T ss_dssp BCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHh
Confidence 45569999994 6554331 1 22357888887 79999999999999999987 699999999876 78
Q ss_pred CCc-EEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccc
Q psy17178 113 INT-EVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGY 191 (384)
Q Consensus 113 ~~v-~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~ 191 (384)
+|+ +|++||+|++..+++|.+...- .+...+++++|++++++++||+.....+ .|....|+++||| ||+|...
T Consensus 104 kGvd~I~ciSVND~FVm~AW~k~~~~---~~~~~i~~laD~~~eftkalGl~~~~~~--gg~RS~Rya~IVd-DGvV~~~ 177 (199)
T 4h86_A 104 KEVDQVIVVTVDNPFANQAWAKSLGV---KDTTHIKFASDPGCAFTKSIGFELAVGD--GVYWSGRWAMVVE-NGIVTYA 177 (199)
T ss_dssp SCCCEEEEEESSCHHHHHHHHHHTTC---CCCSSEEEEECGGGHHHHHTTCEEEEET--TEEEECSEEEEEE-TTEEEEE
T ss_pred cCCcEEEEEEcCCHHHHHHHHHHhcc---cccccccccCCcchHHHHhcCceeecCC--CcceeeEEEEEEE-CCEEEEE
Confidence 888 7999999999999999885411 1245799999999999999998655421 1223457889998 9999754
No 213
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.41 E-value=9e-13 Score=117.56 Aligned_cols=75 Identities=12% Similarity=-0.016 Sum_probs=58.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh---CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
.+++++|+|| ++||++|+.+.|.++++++++++ .++.++.|+.|. ...
T Consensus 133 ~~~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~----------------------------~~~ 183 (226)
T 1a8l_A 133 DQDVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE----------------------------YPE 183 (226)
T ss_dssp CSCEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG----------------------------CHH
T ss_pred CCCcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc----------------------------CHH
Confidence 4555599999 99999999999999999999974 367887776551 235
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.+.||+ ..+|+++++ ++|+.+..+..
T Consensus 184 l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 210 (226)
T 1a8l_A 184 WADQYNV------MAVPKIVIQ-VNGEDRVEFEG 210 (226)
T ss_dssp HHHHTTC------CSSCEEEEE-ETTEEEEEEES
T ss_pred HHHhCCC------cccCeEEEE-eCCceeEEEcC
Confidence 6788998 678986655 69998876653
No 214
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.38 E-value=6.3e-13 Score=107.36 Aligned_cols=97 Identities=9% Similarity=-0.002 Sum_probs=77.5
Q ss_pred CCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCc
Q psy17178 246 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTP 325 (384)
Q Consensus 246 ~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~ 325 (384)
.+++++..++ +|........+||+++|+|| ++||++|..+.|.+++++++++ .++.++.|+.|
T Consensus 5 ~~~~l~~~~~---~~~~~~~~~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~------------ 67 (126)
T 2l57_A 5 GIKQINFQSI---NVVENLEEAKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE------------ 67 (126)
T ss_dssp CSSCTTTTCC---SEESSTTTCCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT------------
T ss_pred ccCCCCcccc---chhHHHHHHhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC------------
Confidence 4556665533 66655566678999999999 9999999999999999999886 67999999965
Q ss_pred cccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 326 RKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 326 ~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|.+..+.++||+ ..+|+++++|++|+++..+..
T Consensus 68 --------------~d~~~~~~~~~~v------~~~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 68 --------------EEKNIDLAYKYDA------NIVPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp --------------SSHHHHHHHHTTC------CSSSEEEEECTTCCEEEEEES
T ss_pred --------------CCchHHHHHHcCC------cceeEEEEECCCCCEEEEecC
Confidence 1223467788998 689999999999999987653
No 215
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.36 E-value=2.9e-13 Score=113.76 Aligned_cols=106 Identities=9% Similarity=0.063 Sum_probs=82.0
Q ss_pred CCCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 242 FVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTH 318 (384)
Q Consensus 242 ~~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~ 318 (384)
..+...++| . + .|+.+++++.+||+++|+||.++||++|+.+.|.+ .++.+.+. .++.++.|+.+...
T Consensus 25 ~~~~~~~~~--~---~-~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~-- 95 (154)
T 2ju5_A 25 PIAAANLQW--E---S-YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN-- 95 (154)
T ss_dssp SSCCCCCCE--E---C-HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC--
T ss_pred hcccCCCCC--C---C-HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc--
Confidence 345556666 2 1 57789999999999999999789999999999999 67755443 46888888876432
Q ss_pred HHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEE
Q psy17178 319 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWF 377 (384)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~ 377 (384)
+++++ +.|.+..+.+.|++ ..+|+++++|++|++++.+
T Consensus 96 --------------~~~~~-~~~~~~~l~~~~~v------~~~Pt~~~~d~~G~~~~~~ 133 (154)
T 2ju5_A 96 --------------HQPEE-QRQKNQELKAQYKV------TGFPELVFIDAEGKQLARM 133 (154)
T ss_dssp --------------CCCHH-HHHHHHHHHHHTTC------CSSSEEEEECTTCCEEEEE
T ss_pred --------------CCChh-hHhhHHHHHHHcCC------CCCCEEEEEcCCCCEEEEe
Confidence 12333 24666889999999 6899999999999999976
No 216
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.31 E-value=1.3e-11 Score=105.99 Aligned_cols=118 Identities=18% Similarity=0.253 Sum_probs=96.2
Q ss_pred ceeeecccc--CCCeEEEEEEeCCCCcCchH-hHHHHHHHHHHH-HhCCc-EEEEEeCCCHHhHHHHhcCccccCCCCCc
Q psy17178 260 LKEIKLSDY--YGKYLVFFFYPLDFTFVCPT-EILAFNDRLEEF-HQINT-EVVAASVDSHFTHLAWVNTPRKEGGLGKL 334 (384)
Q Consensus 260 g~~~~l~d~--~Gk~vvl~F~~a~~c~~C~~-~~~~l~~l~~~~-~~~~v-~vv~Is~d~~~~~~~~~~~~~~~~~~~~~ 334 (384)
-+++++++. +||.|||++.|+.++|.|.. ++|.+.+.++++ +.+|+ +|+.||+|++..+.+|.+...... ..
T Consensus 57 P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd~I~ciSVND~FVm~AW~k~~~~~~---~~ 133 (199)
T 4h86_A 57 PQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKD---TT 133 (199)
T ss_dssp CEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCCEEEEEESSCHHHHHHHHHHTTCCC---CS
T ss_pred CeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCcEEEEEEcCCHHHHHHHHHHhcccc---cc
Confidence 356888875 79999999999999999986 699999998875 77887 799999999999999988763221 45
Q ss_pred ceeEEecCchHHHHHhCceecCCC---ceeeEEEEEeCCceEEEEEecCC
Q psy17178 335 KIPLLSDLTHKISLDYGVYLSDQG---HTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 335 ~~~~~~D~~~~~~~~~gv~~~~~~---~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
.++++.|.++++++++|+.....+ ...+..+||| ||+|.+.+...+
T Consensus 134 ~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~vE~~ 182 (199)
T 4h86_A 134 HIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAAKETN 182 (199)
T ss_dssp SEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEEECSS
T ss_pred cccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEEEeCC
Confidence 799999999999999998543222 2446678998 999999988754
No 217
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.30 E-value=5e-13 Score=109.43 Aligned_cols=97 Identities=11% Similarity=-0.012 Sum_probs=76.0
Q ss_pred CCCCCCCCce-eeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHh
Q psy17178 242 FVSKPAPFWQ-GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFT 317 (384)
Q Consensus 242 ~~g~~~P~f~-l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~ 317 (384)
..+..+|+|. +. +.++....+++.+||++||+|| ++||++|+.+.+.+ .++.++++ ++.++.|+.+...
T Consensus 5 ~~~~~~~~f~~~~---~~~~~~~~l~~~~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~- 77 (134)
T 2fwh_A 5 AQTQTHLNFTQIK---TVDELNQALVEAKGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND- 77 (134)
T ss_dssp -----CCCCEECC---SHHHHHHHHHHHTTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC-
T ss_pred cccccCCCcEEec---CHHHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc-
Confidence 4677888887 44 4467677888888999999999 99999999999988 88888774 5999999887421
Q ss_pred HHHHhcCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 318 HLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
|....+.+.||+ ..+|+++++|++|+++
T Consensus 78 -----------------------~~~~~l~~~~~v------~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 -----------------------AQDVALLKHLNV------LGLPTILFFDGQGQEH 105 (134)
T ss_dssp -----------------------HHHHHHHHHTTC------CSSSEEEEECTTSCBC
T ss_pred -----------------------chHHHHHHHcCC------CCCCEEEEECCCCCEe
Confidence 234567888998 6899999999999997
No 218
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.28 E-value=4.5e-13 Score=109.70 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=76.9
Q ss_pred ccCCCCCCccE-EEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCCHH
Q psy17178 51 KNLSKPAPFWQ-GTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHF 126 (384)
Q Consensus 51 ~~~G~~aP~f~-l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~~~ 126 (384)
...|.++|+|+ +.+. ++....+++.+||++||+|| ++|||+|+...+.+ .++.++++ ++.++.|+.+...
T Consensus 4 ~~~~~~~~~f~~~~~~---~~~~~~l~~~~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~ 77 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTV---DELNQALVEAKGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND 77 (134)
T ss_dssp ------CCCCEECCSH---HHHHHHHHHHTTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC
T ss_pred ccccccCCCcEEecCH---HHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc
Confidence 35788999998 4443 66677888888999999999 99999999999988 88888774 5899999876420
Q ss_pred hHHhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcc--cccceee
Q psy17178 127 THLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVN--GYAGGAL 196 (384)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~--~~~~g~~ 196 (384)
|...++++.||+ .+ .|+++++|++|++. ....|..
T Consensus 78 ------------------------~~~~~l~~~~~v--------~~---~Pt~~~~d~~G~~v~~~~~~G~~ 114 (134)
T 2fwh_A 78 ------------------------AQDVALLKHLNV--------LG---LPTILFFDGQGQEHPQARVTGFM 114 (134)
T ss_dssp ------------------------HHHHHHHHHTTC--------CS---SSEEEEECTTSCBCGGGCBCSCC
T ss_pred ------------------------chHHHHHHHcCC--------CC---CCEEEEECCCCCEeeeeeeeecc
Confidence 234567888888 22 35778999999997 5566655
No 219
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.24 E-value=2.1e-11 Score=98.80 Aligned_cols=94 Identities=12% Similarity=0.217 Sum_probs=73.7
Q ss_pred CCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhc
Q psy17178 244 SKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVN 323 (384)
Q Consensus 244 g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~ 323 (384)
...+|+++.. +++.++....+||+++|+|| ++||++|+.+.|.++++++++++ ++.++.|+.|.
T Consensus 21 ~~~~~~~~~~-----~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~--------- 84 (128)
T 3ul3_B 21 FKKVPRLQQN-----GSNIINGVNMKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK--------- 84 (128)
T ss_dssp -----CCCCC-----CCSSSSBTTSCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG---------
T ss_pred hccCCccccC-----CccHHHHHHccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC---------
Confidence 3457777633 67778888889999999999 99999999999999999999874 58888887542
Q ss_pred CccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 324 TPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 324 ~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
...+.++|++ ..+|+++++ ++|+++..+..
T Consensus 85 -------------------~~~l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 114 (128)
T 3ul3_B 85 -------------------NESLARKFSV------KSLPTIILL-KNKTMLARKDH 114 (128)
T ss_dssp -------------------CHHHHHHTTC------CSSSEEEEE-ETTEEEEEESS
T ss_pred -------------------CHHHHHHcCC------CCcCEEEEE-ECCEEEEEecC
Confidence 1367788998 689999999 69999886653
No 220
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.23 E-value=7.5e-13 Score=111.18 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=81.8
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCCHHhH
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTH 128 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~~~~~ 128 (384)
..+...++| .+ .++.+++++.+||+++|+||+++|||+|+.++|.+ .++.+.+. .++.++.|+.+...
T Consensus 25 ~~~~~~~~~--~~----~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~-- 95 (154)
T 2ju5_A 25 PIAAANLQW--ES----YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN-- 95 (154)
T ss_dssp SSCCCCCCE--EC----HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC--
T ss_pred hcccCCCCC--CC----HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc--
Confidence 466667777 22 46788899999999999999889999999999999 66655443 46888888876532
Q ss_pred HhhccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 129 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+++++ +.|...++++.|++ .+ .|+++++|++|++.... |..
T Consensus 96 --------------~~~~~-~~~~~~~l~~~~~v--------~~---~Pt~~~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 96 --------------HQPEE-QRQKNQELKAQYKV--------TG---FPELVFIDAEGKQLARM-GFE 136 (154)
T ss_dssp --------------CCCHH-HHHHHHHHHHHTTC--------CS---SSEEEEECTTCCEEEEE-CCC
T ss_pred --------------CCChh-hHhhHHHHHHHcCC--------CC---CCEEEEEcCCCCEEEEe-cCC
Confidence 12344 35667889999998 33 35788999999998766 654
No 221
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.23 E-value=2.8e-12 Score=103.56 Aligned_cols=99 Identities=9% Similarity=0.008 Sum_probs=73.9
Q ss_pred CCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCc
Q psy17178 56 PAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTP 135 (384)
Q Consensus 56 ~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~ 135 (384)
.+++++..+. +|........+||+++|.|| ++|||+|+...|.+.++.++++ .++.++.|+.|
T Consensus 5 ~~~~l~~~~~---~~~~~~~~~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~------------ 67 (126)
T 2l57_A 5 GIKQINFQSI---NVVENLEEAKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE------------ 67 (126)
T ss_dssp CSSCTTTTCC---SEESSTTTCCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT------------
T ss_pred ccCCCCcccc---chhHHHHHHhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC------------
Confidence 4556665544 55555556668899999999 9999999999999999999886 67999999865
Q ss_pred cccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 136 RKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 136 ~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.|.+.++++.||+ . ..|+++++|++|++.....|..
T Consensus 68 --------------~d~~~~~~~~~~v--------~---~~Pt~~~~~~~G~~~~~~~G~~ 103 (126)
T 2l57_A 68 --------------EEKNIDLAYKYDA--------N---IVPTTVFLDKEGNKFYVHQGLM 103 (126)
T ss_dssp --------------SSHHHHHHHHTTC--------C---SSSEEEEECTTCCEEEEEESCC
T ss_pred --------------CCchHHHHHHcCC--------c---ceeEEEEECCCCCEEEEecCCC
Confidence 1122457778888 2 2357789999999876555543
No 222
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.23 E-value=3.8e-13 Score=114.90 Aligned_cols=108 Identities=11% Similarity=-0.022 Sum_probs=70.5
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
++.+.++..+||+++|+|| ++||++|+.+.+.+ .++.+.+++ ++.++.|+.|....+.+..... .. .....+
T Consensus 37 ~~~~~~a~~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~-~~--~~~~~~ 111 (172)
T 3f9u_A 37 DLGMEYARQHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIM-EN--GTERTL 111 (172)
T ss_dssp HHHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEE-ET--TEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhh-hc--chhhhh
Confidence 3456667778999999999 99999999864333 555555544 6999999998643221111100 00 001223
Q ss_pred eEEecCchHH-HHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 337 PLLSDLTHKI-SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 337 ~~~~D~~~~~-~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..+.|..+.+ .+.||+ ..+|+++++|++|+++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~v------~~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 112 RTVGDKWSYLQRVKFGA------NAQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp EEHHHHHHHHHHHHHSC------CCSSEEEEECTTSCBSSCCB
T ss_pred hhhhhhhhHHHHHHcCC------CCcceEEEECCCCCEEeecc
Confidence 3333333444 588999 78999999999999998655
No 223
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.20 E-value=5.2e-11 Score=97.86 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=71.0
Q ss_pred cCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 257 DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 257 d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
+.+|...++++++||+++|+|| ++||++|....|.+.++.+++++ ++.++.|+.|.
T Consensus 38 ~~~~~~~~l~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------- 93 (141)
T 3hxs_A 38 DYENHSKEWKYLGDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK---------------------- 93 (141)
T ss_dssp CCSSCCCCCCCCCSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------
T ss_pred ccccchhHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC----------------------
Confidence 4578888899999999999999 99999999999999999998864 48888887653
Q ss_pred eEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 337 PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 337 ~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
+..+.+.||+ ..+|+++++|++|+++.
T Consensus 94 ------~~~~~~~~~v------~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 94 ------EPELARDFGI------QSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp ------CHHHHHHTTC------CSSSEEEEECSSSCCEE
T ss_pred ------CHHHHHHcCC------CCcCEEEEEeCCCCEEE
Confidence 2356788898 68999999999999873
No 224
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.19 E-value=6.8e-11 Score=106.91 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=55.9
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh---CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecC
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDL 342 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 342 (384)
.++.|++++++|| ++||++|+...|.++++.++++. .++.+..|..+.
T Consensus 134 ~~~~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~---------------------------- 184 (243)
T 2hls_A 134 KSLKGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE---------------------------- 184 (243)
T ss_dssp HHCCSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT----------------------------
T ss_pred HHcCCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc----------------------------
Confidence 3567888899999 99999999999999999999853 467777776542
Q ss_pred chHHHHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 343 THKISLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 343 ~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
...+.++||+ ..+|++++ +|+++
T Consensus 185 ~~~~~~~~~V------~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 185 NPDIADKYGV------MSVPSIAI---NGYLV 207 (243)
T ss_dssp CHHHHHHTTC------CSSSEEEE---TTEEE
T ss_pred CHHHHHHcCC------eeeCeEEE---CCEEE
Confidence 1346677888 67888777 78876
No 225
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.16 E-value=5.5e-11 Score=113.67 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=37.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhC-CcEEEEEeCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-NTEVVAASVD 313 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d 313 (384)
.+|+++|+|| ++||++|+...|.+.++.+++++. ++.++.|..+
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 5799999999 999999999999999999999764 4666655544
No 226
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.16 E-value=3.6e-11 Score=97.89 Aligned_cols=89 Identities=15% Similarity=0.135 Sum_probs=69.4
Q ss_pred eeccccCCCeEEEEEEeCCCCcCchHhHHHHH--HHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEe
Q psy17178 263 IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFN--DRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLS 340 (384)
Q Consensus 263 ~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~--~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (384)
+..+...||+++|+|| ++||++|..+.|.|+ ++.+++++ ++.++.|+.++ .
T Consensus 22 ~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~-------------------------~ 74 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN-------------------------F 74 (133)
T ss_dssp HHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT-------------------------T
T ss_pred HHHHHhcCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc-------------------------c
Confidence 4444457999999999 999999999999999 99988864 58999998863 1
Q ss_pred cCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEecCC
Q psy17178 341 DLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 341 D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~~ 381 (384)
|....+.+.|++... ..+|+++++|++|++++.+..+.
T Consensus 75 ~~~~~l~~~~~v~~~---~~~Pt~~~~d~~G~~~~~~~g~~ 112 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQ---DGIPAVVVVNSDGKVRYTTKGGE 112 (133)
T ss_dssp TSSHHHHHHTTCGGG---GCSSEEEEECTTSCEEEECCSCT
T ss_pred cchHHHHHHhCCccC---CccceEEEECCCCCEEEEecCCc
Confidence 234566777877211 36899999999999999776543
No 227
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.16 E-value=5.1e-11 Score=106.42 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=50.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+++++++|| ++||++|+...|.++++.+++ .++.++.|+.|. ...+.+
T Consensus 135 ~~~~~~v~F~-a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~----------------------------~~~l~~ 183 (229)
T 2ywm_A 135 DIPIEIWVFV-TTSCGYCPSAAVMAWDFALAN--DYITSKVIDASE----------------------------NQDLAE 183 (229)
T ss_dssp CSCEEEEEEE-CTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGG----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCC----------------------------CHHHHH
Confidence 4556688999 999999999999999999887 368888777552 234677
Q ss_pred HhCceecCCCceeeEEEEEeCCceE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.||+ ..+|++++ +|++
T Consensus 184 ~~~v------~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 184 QFQV------VGVPKIVI---NKGV 199 (229)
T ss_dssp HTTC------CSSSEEEE---GGGT
T ss_pred HcCC------cccCEEEE---CCEE
Confidence 8888 67888777 7774
No 228
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=9.2e-11 Score=94.89 Aligned_cols=86 Identities=13% Similarity=0.118 Sum_probs=66.7
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
.+.+++++.+||+++|+|| ++||++|..+.|.+ +++.+.++ .++.++.|+.|.
T Consensus 17 ~~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~---------------------- 72 (130)
T 2kuc_A 17 PEALKRAEVEDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEK---------------------- 72 (130)
T ss_dssp HHHHHHHHHHSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSS----------------------
T ss_pred HHHHHHHHhcCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCC----------------------
Confidence 3456777778999999999 99999999999998 55555543 346666666553
Q ss_pred eEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 337 PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 337 ~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+....+.++||+ ..+|+++++|++|+++..+..
T Consensus 73 ----~~~~~~~~~~~v------~~~Pt~~~~d~~G~~~~~~~G 105 (130)
T 2kuc_A 73 ----GEGVELRKKYGV------HAYPTLLFINSSGEVVYRLVG 105 (130)
T ss_dssp ----TTHHHHHHHTTC------CSSCEEEEECTTSCEEEEEES
T ss_pred ----cchHHHHHHcCC------CCCCEEEEECCCCcEEEEecC
Confidence 234577888998 689999999999999987653
No 229
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.09 E-value=1.2e-10 Score=99.06 Aligned_cols=83 Identities=10% Similarity=-0.037 Sum_probs=63.3
Q ss_pred eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEec
Q psy17178 262 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSD 341 (384)
Q Consensus 262 ~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D 341 (384)
...+++++||+++|+|| ++|||+|+.++|.|++++++++ ++.++.|++|.. .+..+++ .-
T Consensus 46 ~~~l~~~~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~---~~~~~~~-------~~------- 105 (167)
T 1z6n_A 46 TERLQRIERRYRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA---EDDLRQR-------LA------- 105 (167)
T ss_dssp HHHHHTCCSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH---HHHTTTT-------TT-------
T ss_pred HHHHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC---HHHHHHH-------HH-------
Confidence 34466788999999999 9999999999999999998763 688888887632 2233322 10
Q ss_pred CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 342 LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 342 ~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.|+ ..+|+++++|++|+++..+.
T Consensus 106 --------~~v------~~iPt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 106 --------LER------IAIPLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp --------CSS------CCSSEEEEECTTCCEEEEEE
T ss_pred --------cCC------CCcCeEEEECCCCCEEEEEc
Confidence 134 57899999999999987663
No 230
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.08 E-value=1.5e-11 Score=104.84 Aligned_cols=110 Identities=9% Similarity=-0.029 Sum_probs=69.5
Q ss_pred ceEEccccCCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCcccee
Q psy17178 71 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIP 147 (384)
Q Consensus 71 ~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p 147 (384)
+.+.+++.+||+++|+|| ++||++|+...+.+ .++.+.+++ ++.++.|+.|............ .. .....+.
T Consensus 38 ~~~~~a~~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~-~~--~~~~~~~ 112 (172)
T 3f9u_A 38 LGMEYARQHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIM-EN--GTERTLR 112 (172)
T ss_dssp HHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEE-ET--TEEEEEE
T ss_pred HHHHHHHHcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhh-hc--chhhhhh
Confidence 345666678999999999 99999999853333 455555544 7999999998744322111110 00 0012233
Q ss_pred EEeeCcchh-HHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 148 LLSDLTHKI-SLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 148 ~l~D~~~~~-~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.+.|..+.+ ++.||+ . ..|+++++|++|+++....|..
T Consensus 113 ~~~~~~~~~~~~~~~v--------~---~~Pt~~lid~~G~~~~~~~G~~ 151 (172)
T 3f9u_A 113 TVGDKWSYLQRVKFGA--------N---AQPFYVLIDNEGNPLNKSYAYD 151 (172)
T ss_dssp EHHHHHHHHHHHHHSC--------C---CSSEEEEECTTSCBSSCCBCSC
T ss_pred hhhhhhhHHHHHHcCC--------C---CcceEEEECCCCCEEeeccCCC
Confidence 333433444 578888 2 3457789999999998777766
No 231
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.07 E-value=4.5e-10 Score=88.18 Aligned_cols=76 Identities=8% Similarity=0.046 Sum_probs=62.9
Q ss_pred ccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 267 DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 267 d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
+.+||+++|+|| ++||++|+...|.+++++++++ ++.++.|+.|+ .+..+
T Consensus 21 ~~~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~---------------------------~~~~~ 70 (111)
T 2pu9_C 21 AAGDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKTL 70 (111)
T ss_dssp TCTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHHH
T ss_pred hcCCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc---------------------------chHHH
Confidence 346899999999 9999999999999999998875 58888888762 13467
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++|++ ..+|+ ++++++|+++..+..
T Consensus 71 ~~~~~v------~~~Pt-~~~~~~G~~~~~~~G 96 (111)
T 2pu9_C 71 AKELGI------RVVPT-FKILKENSVVGEVTG 96 (111)
T ss_dssp HHHHCC------SBSSE-EEEESSSSEEEEEES
T ss_pred HHHcCC------CeeeE-EEEEeCCcEEEEEcC
Confidence 788998 67887 788899999986654
No 232
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.06 E-value=8.6e-10 Score=86.85 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=63.3
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||++|....|.++++++++++ ++.++.|+.|. +..+.+
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 65 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE----------------------------NQETAG 65 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------CCSHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC----------------------------CHHHHH
Confidence 7899999999 99999999999999999999864 58999998763 124678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+||+ ..+|+++++ ++|+++..+..
T Consensus 66 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 89 (112)
T 2voc_A 66 KYGV------MSIPTLLVL-KDGEVVETSVG 89 (112)
T ss_dssp HTTC------CSBSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcccEEEEE-eCCEEEEEEeC
Confidence 8998 689999999 89999987653
No 233
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.02 E-value=5e-10 Score=91.89 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=67.7
Q ss_pred CccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCcccee
Q psy17178 68 GQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIP 147 (384)
Q Consensus 68 ~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p 147 (384)
.+|...++++++||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|.
T Consensus 39 ~~~~~~~l~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------- 93 (141)
T 3hxs_A 39 YENHSKEWKYLGDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK----------------------- 93 (141)
T ss_dssp CSSCCCCCCCCCSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT-----------------------
T ss_pred cccchhHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC-----------------------
Confidence 377888999999999999999 99999999999999999999864 47887777653
Q ss_pred EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 148 LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 148 ~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
..++++.||| .+ .|+++++|++|++. ...|.
T Consensus 94 -----~~~~~~~~~v--------~~---~Pt~~~~~~~g~~~-~~~G~ 124 (141)
T 3hxs_A 94 -----EPELARDFGI--------QS---IPTIWFVPMKGEPQ-VNMGA 124 (141)
T ss_dssp -----CHHHHHHTTC--------CS---SSEEEEECSSSCCE-EEESC
T ss_pred -----CHHHHHHcCC--------CC---cCEEEEEeCCCCEE-EEeCC
Confidence 2346777887 22 34678899999886 34443
No 234
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.01 E-value=8.4e-10 Score=91.50 Aligned_cols=97 Identities=8% Similarity=0.035 Sum_probs=74.9
Q ss_pred CCCCCCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHh
Q psy17178 243 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWV 322 (384)
Q Consensus 243 ~g~~~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~ 322 (384)
.|..+++.....+ +++.+...-.+||+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|.
T Consensus 31 ~~~~~~~~~v~~l---~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~-------- 97 (148)
T 3p2a_A 31 CGHSLFDGEVINA---TAETLDKLLQDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEA-------- 97 (148)
T ss_dssp TCCBTTCCCCEEC---CTTTHHHHTTCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT--------
T ss_pred cCCccccCCceec---CHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcC--------
Confidence 4566677777655 55555544457899999999 99999999999999999998864 48888887762
Q ss_pred cCccccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 323 NTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+..+.+.|++ ..+|+++++ ++|+++..+..
T Consensus 98 --------------------~~~l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 127 (148)
T 3p2a_A 98 --------------------EPALSTRFRI------RSIPTIMLY-RNGKMIDMLNG 127 (148)
T ss_dssp --------------------CHHHHHHTTC------CSSSEEEEE-ETTEEEEEESS
T ss_pred --------------------CHHHHHHCCC------CccCEEEEE-ECCeEEEEEeC
Confidence 2356778898 678987777 59999986653
No 235
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.00 E-value=5.5e-10 Score=88.70 Aligned_cols=76 Identities=14% Similarity=0.087 Sum_probs=62.3
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
++.+||+++|+|| ++||++|+...|.++++.+++++ +.++.|+.|. ...
T Consensus 27 ~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~----------------------------~~~ 75 (116)
T 3qfa_C 27 DAAGDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD----------------------------CQD 75 (116)
T ss_dssp HHHTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT----------------------------THH
T ss_pred HhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC----------------------------CHH
Confidence 3447899999999 99999999999999999988754 8888888763 235
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.+.|++ ..+|+++++ ++|+++..+..
T Consensus 76 l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 102 (116)
T 3qfa_C 76 VASECEV------KSMPTFQFF-KKGQKVGEFSG 102 (116)
T ss_dssp HHHHTTC------CSSSEEEEE-SSSSEEEEEES
T ss_pred HHHHcCC------ccccEEEEE-eCCeEEEEEcC
Confidence 6788998 678887777 79999887664
No 236
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.99 E-value=1e-09 Score=85.76 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=60.5
Q ss_pred ccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCch
Q psy17178 265 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 344 (384)
Q Consensus 265 l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 344 (384)
+.+..+|+++|+|| |+||++|+...|.+.++.++++ ++.++.|+.|. ..
T Consensus 15 l~~~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~----------------------------~~ 63 (105)
T 3zzx_A 15 LNEAGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDE----------------------------CE 63 (105)
T ss_dssp HHHTTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTT----------------------------CH
T ss_pred HHhcCCCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEeccc----------------------------CH
Confidence 33446799999999 9999999999999999998774 56677666542 24
Q ss_pred HHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 345 KISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 345 ~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++++||+ ..+|+.+++ ++|+++..+..
T Consensus 64 ~l~~~~~V------~~~PT~~~~-~~G~~v~~~~G 91 (105)
T 3zzx_A 64 DIAQDNQI------ACMPTFLFM-KNGQKLDSLSG 91 (105)
T ss_dssp HHHHHTTC------CBSSEEEEE-ETTEEEEEEES
T ss_pred HHHHHcCC------CeecEEEEE-ECCEEEEEEeC
Confidence 57788999 688876555 79999987764
No 237
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.7e-09 Score=84.93 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=60.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||++|....|.++++.++++..++.++.|+.|. ...+.+
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~~~~ 70 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE----------------------------NSEISE 70 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT----------------------------CHHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc----------------------------CHHHHH
Confidence 4899999999 99999999999999999998766679999998773 125678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.||+ ..+|+++++ ++|+++..+..
T Consensus 71 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 94 (112)
T 3d6i_A 71 LFEI------SAVPYFIII-HKGTILKELSG 94 (112)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEECS
T ss_pred HcCC------CcccEEEEE-ECCEEEEEecC
Confidence 8998 688987777 69999986654
No 238
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.99 E-value=5e-10 Score=91.71 Aligned_cols=80 Identities=10% Similarity=0.046 Sum_probs=65.5
Q ss_pred eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEec
Q psy17178 262 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSD 341 (384)
Q Consensus 262 ~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D 341 (384)
.++.++.+||+++|+|| ++||++|..+.|.++++.+++ .++.++.|+.|.
T Consensus 38 ~~~~~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~--------------------------- 87 (139)
T 3d22_A 38 KLSEASRDGKIVLANFS-ARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDE--------------------------- 87 (139)
T ss_dssp HHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT---------------------------
T ss_pred HHHHHhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcc---------------------------
Confidence 45555567999999999 999999999999999999887 368999998762
Q ss_pred CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 342 LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 342 ~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
...+.++||+ ..+|+++++ ++|+++..+..
T Consensus 88 -~~~~~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 117 (139)
T 3d22_A 88 -LSDFSASWEI------KATPTFFFL-RDGQQVDKLVG 117 (139)
T ss_dssp -SHHHHHHTTC------CEESEEEEE-ETTEEEEEEES
T ss_pred -cHHHHHHcCC------CcccEEEEE-cCCeEEEEEeC
Confidence 2357788998 688987777 89999987664
No 239
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.99 E-value=1.2e-09 Score=87.52 Aligned_cols=76 Identities=9% Similarity=0.096 Sum_probs=62.1
Q ss_pred ccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 267 DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 267 d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
+.+||+++|+|| ++||++|+...|.++++.++++ ++.++.|+.++ .+..+
T Consensus 34 ~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~---------------------------~~~~~ 83 (124)
T 1faa_A 34 AAGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKTL 83 (124)
T ss_dssp HTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHHH
T ss_pred hcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc---------------------------chHHH
Confidence 347899999999 9999999999999999998875 58888888762 12467
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.++||+ ..+|+ ++++++|+++..+..
T Consensus 84 ~~~~~v------~~~Pt-~~~~~~G~~~~~~~G 109 (124)
T 1faa_A 84 AKELGI------RVVPT-FKILKENSVVGEVTG 109 (124)
T ss_dssp HHHHCC------SSSSE-EEEEETTEEEEEEES
T ss_pred HHHcCC------CeeeE-EEEEeCCcEEEEEcC
Confidence 788998 67887 667789999987664
No 240
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.98 E-value=2.9e-10 Score=91.94 Aligned_cols=98 Identities=10% Similarity=0.208 Sum_probs=68.0
Q ss_pred cCCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhh
Q psy17178 52 NLSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAW 131 (384)
Q Consensus 52 ~~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~ 131 (384)
....++|+++. . +++.++....+||+++|.|| ++||++|+...|.+.++.+++++ ++.++.|+.|.
T Consensus 19 ~~~~~~~~~~~--~---~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~------- 84 (128)
T 3ul3_B 19 RMFKKVPRLQQ--N---GSNIINGVNMKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK------- 84 (128)
T ss_dssp -------CCCC--C---CCSSSSBTTSCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------
T ss_pred HHhccCCcccc--C---CccHHHHHHccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------
Confidence 35567788773 3 55667777889999999999 99999999999999999999874 57888886542
Q ss_pred ccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 132 VNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 132 ~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..++++.||| +++ |+++++ ++|++.....|..
T Consensus 85 ---------------------~~~l~~~~~v--------~~~---Pt~~~~-~~G~~~~~~~G~~ 116 (128)
T 3ul3_B 85 ---------------------NESLARKFSV--------KSL---PTIILL-KNKTMLARKDHFV 116 (128)
T ss_dssp ---------------------CHHHHHHTTC--------CSS---SEEEEE-ETTEEEEEESSCC
T ss_pred ---------------------CHHHHHHcCC--------CCc---CEEEEE-ECCEEEEEecCCC
Confidence 1257777887 232 345566 6888776555543
No 241
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.98 E-value=4.9e-10 Score=90.21 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=61.4
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
+..+||+++|+|| ++||++|....|.|+++.++++ ++.++.|+.|. +..
T Consensus 34 ~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~----------------------------~~~ 82 (124)
T 1xfl_A 34 ANESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE----------------------------LKS 82 (124)
T ss_dssp HHHTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT----------------------------SHH
T ss_pred hhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc----------------------------CHH
Confidence 3346999999999 9999999999999999998874 68888888752 245
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.++|++ ..+|+++++ ++|+++..+..
T Consensus 83 l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 109 (124)
T 1xfl_A 83 VASDWAI------QAMPTFMFL-KEGKILDKVVG 109 (124)
T ss_dssp HHHHTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HHHHcCC------CccCEEEEE-ECCEEEEEEeC
Confidence 6788998 678875555 89999987654
No 242
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.97 E-value=1.3e-09 Score=85.53 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=62.0
Q ss_pred cCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHH
Q psy17178 268 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 347 (384)
Q Consensus 268 ~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 347 (384)
.+||+++|+|| ++||++|+...|.++++.++++ ++.++.|+.|. ...+.
T Consensus 22 ~~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~----------------------------~~~l~ 70 (109)
T 3f3q_A 22 AQDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDE----------------------------LGDVA 70 (109)
T ss_dssp TSSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHHHH
T ss_pred hcCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CHHHH
Confidence 36899999999 9999999999999999999884 47888887652 24567
Q ss_pred HHhCceecCCCceeeEEEEEeCCceEEEEEecC
Q psy17178 348 LDYGVYLSDQGHTLDKYCLECYKMVIVYWFERG 380 (384)
Q Consensus 348 ~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~~ 380 (384)
+.|++ ..+|++++++ +|+++..+...
T Consensus 71 ~~~~v------~~~Pt~~~~~-~G~~~~~~~G~ 96 (109)
T 3f3q_A 71 QKNEV------SAMPTLLLFK-NGKEVAKVVGA 96 (109)
T ss_dssp HHTTC------CSSSEEEEEE-TTEEEEEEESS
T ss_pred HHcCC------CccCEEEEEE-CCEEEEEEeCC
Confidence 88998 6889988887 99998877643
No 243
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.95 E-value=2.6e-09 Score=82.64 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=61.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 65 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE----------------------------NPETTS 65 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC----------------------------CHHHHH
Confidence 5789999999 99999999999999999998864 38888888753 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.||+ ..+|+++++ ++|+++..+..
T Consensus 66 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 89 (105)
T 1nsw_A 66 QFGI------MSIPTLILF-KGGRPVKQLIG 89 (105)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------ccccEEEEE-eCCeEEEEEec
Confidence 8998 688999999 79999886653
No 244
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.94 E-value=1e-09 Score=89.50 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=62.2
Q ss_pred cceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeE
Q psy17178 259 QLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPL 338 (384)
Q Consensus 259 ~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (384)
++-.-.+++.+||++||+|| ++||++|..+.|.++++.+++ ++.++.|+.|.
T Consensus 29 ~~~~~~l~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~------------------------ 80 (133)
T 3cxg_A 29 GSLNQVFSSTQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI------------------------ 80 (133)
T ss_dssp THHHHHHTC-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT------------------------
T ss_pred hHHHHHHHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc------------------------
Confidence 33334455667899999999 999999999999999887665 47777776542
Q ss_pred EecCchHHHHHhCceecCCCceeeEEEEE-eCCce--EEEEEec
Q psy17178 339 LSDLTHKISLDYGVYLSDQGHTLDKYCLE-CYKMV--IVYWFER 379 (384)
Q Consensus 339 ~~D~~~~~~~~~gv~~~~~~~~~p~~~lI-d~~G~--i~~~~~~ 379 (384)
...+.+.||+ ..+|+++++ |++|+ ++..+..
T Consensus 81 ----~~~l~~~~~v------~~~Pt~~~~~~~~g~g~~~~~~~G 114 (133)
T 3cxg_A 81 ----HPKLNDQHNI------KALPTFEFYFNLNNEWVLVHTVEG 114 (133)
T ss_dssp ----CHHHHHHTTC------CSSSEEEEEEEETTEEEEEEEEES
T ss_pred ----hHHHHHhcCC------CCCCEEEEEEecCCCeEEEEEEcC
Confidence 2457788998 689999888 55666 8776653
No 245
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.94 E-value=2.1e-09 Score=87.78 Aligned_cols=71 Identities=10% Similarity=0.163 Sum_probs=60.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 86 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK----------------------------EQELAG 86 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC----------------------------CHHHHH
Confidence 4689999999 99999999999999999998864 48888888753 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
.|++ ..+|+++++|++|+++.
T Consensus 87 ~~~v------~~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 87 AFGI------RSIPSILFIPMEGKPEM 107 (136)
T ss_dssp HTTC------CSSCEEEEECSSSCCEE
T ss_pred HcCC------CCCCEEEEECCCCcEEE
Confidence 8998 68999999999999873
No 246
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.93 E-value=7.8e-10 Score=110.53 Aligned_cols=46 Identities=9% Similarity=0.130 Sum_probs=41.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSH 125 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~ 125 (384)
.+++++|.|| +.||++|+...|.+.++.+++++.++.++.|+.+..
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~ 75 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN 75 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC
Confidence 4789999999 999999999999999999999876899999988763
No 247
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.93 E-value=5.4e-09 Score=80.85 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=61.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|+++|+|| ++||+.|....|.++++.++++++ +.++.|+.|. +..+.+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~----------------------------~~~~~~ 67 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE----------------------------NPSTAA 67 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT----------------------------CHHHHH
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc----------------------------CHHHHH
Confidence 7899999999 999999999999999999998754 8888888753 234667
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|++++++ +|+++..+..
T Consensus 68 ~~~v------~~~Pt~~~~~-~G~~~~~~~g 91 (106)
T 3die_A 68 KYEV------MSIPTLIVFK-DGQPVDKVVG 91 (106)
T ss_dssp HTTC------CSBSEEEEEE-TTEEEEEEES
T ss_pred hCCC------cccCEEEEEe-CCeEEEEEeC
Confidence 8888 6789888886 9999886653
No 248
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.93 E-value=4.5e-09 Score=94.78 Aligned_cols=44 Identities=9% Similarity=0.031 Sum_probs=38.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh--CCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~--~~v~vi~Vs~d 123 (384)
.+++++|.|| ++||++|+...|.+.++++++++ .++.++.|+.+
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 74 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA 74 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC
Confidence 3589999999 99999999999999999999976 46888888764
No 249
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.92 E-value=4.4e-09 Score=82.44 Aligned_cols=74 Identities=14% Similarity=0.171 Sum_probs=60.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 71 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE----------------------------NPGTAA 71 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 48898888763 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.||+ ..+|+++++ ++|+++..+..
T Consensus 72 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 95 (112)
T 1t00_A 72 KYGV------MSIPTLNVY-QGGEVAKTIVG 95 (112)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred hCCC------CcccEEEEE-eCCEEEEEEeC
Confidence 8888 678876555 79999886653
No 250
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.91 E-value=1.7e-09 Score=113.86 Aligned_cols=72 Identities=8% Similarity=-0.078 Sum_probs=57.3
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||++|+...|.++++++++++ ++.++.|+.|.. ..+.+
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~----------------------------~~~~~ 723 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAY----------------------------PQTCQ 723 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC----------------------------HHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCC----------------------------HHHHH
Confidence 5789999999 99999999999999999999865 588888877531 24567
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWF 377 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~ 377 (384)
.||+ ..+|+++++ ++|+++..+
T Consensus 724 ~~~v------~~~Pt~~~~-~~g~~~~~~ 745 (780)
T 3apo_A 724 KAGI------KAYPSVKLY-QYERAKKSI 745 (780)
T ss_dssp HTTC------CSSSEEEEE-EEETTTTEE
T ss_pred hcCC------CcCCEEEEE-cCCCccccc
Confidence 7888 578888888 677765433
No 251
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.91 E-value=4.4e-09 Score=83.73 Aligned_cols=74 Identities=12% Similarity=0.111 Sum_probs=61.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.|+++.+++++ ++.++.|+.|. +..+.+
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~----------------------------~~~l~~ 79 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD----------------------------HTDLAI 79 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT----------------------------THHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999998864 58898888763 235778
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|+++++ ++|+++..+..
T Consensus 80 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 103 (119)
T 1w4v_A 80 EYEV------SAVPTVLAM-KNGDVVDKFVG 103 (119)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcccEEEEE-eCCcEEEEEcC
Confidence 8998 678998888 79999886653
No 252
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.90 E-value=3.5e-09 Score=97.74 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=62.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||++|+.+.|.+.++.+++++ ++.++.|+.|.. ..+.+
T Consensus 25 ~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~ 74 (287)
T 3qou_A 25 MTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE----------------------------QMIAA 74 (287)
T ss_dssp TTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC----------------------------HHHHH
T ss_pred CCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC----------------------------HHHHH
Confidence 5899999999 99999999999999999999974 488988887631 25677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.||+ ..+|+++++ ++|+++..+..
T Consensus 75 ~~~v------~~~Pt~~~~-~~G~~~~~~~g 98 (287)
T 3qou_A 75 QFGL------RAIPTVYLF-QNGQPVDGFQG 98 (287)
T ss_dssp TTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CCCCeEEEE-ECCEEEEEeeC
Confidence 8898 688988888 69999987764
No 253
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.90 E-value=7.1e-09 Score=81.40 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=61.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.++++++ +.++.|+.|.. ..+.+
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~----------------------------~~~~~ 73 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPN----------------------------PTTVK 73 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTC----------------------------HHHHH
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCC----------------------------HHHHH
Confidence 5789999999 999999999999999999988654 89999987631 24678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.|++ ..+|+++++ ++|+++..+.
T Consensus 74 ~~~v------~~~Pt~~~~-~~G~~~~~~~ 96 (115)
T 1thx_A 74 KYKV------EGVPALRLV-KGEQILDSTE 96 (115)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEE
T ss_pred HcCC------CceeEEEEE-cCCEEEEEec
Confidence 8998 678999999 8999998665
No 254
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.90 E-value=1.3e-09 Score=88.44 Aligned_cols=87 Identities=17% Similarity=0.125 Sum_probs=64.5
Q ss_pred EEccccCCCeEEEEEeeCCCCCCchHHHHHHH--HhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEe
Q psy17178 73 IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFN--DRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLS 150 (384)
Q Consensus 73 ~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~--~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~ 150 (384)
+......||+++|+|| ++||++|+...|.|. ++.+++++ ++.++.|+.+. .
T Consensus 22 ~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~-------------------------~ 74 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN-------------------------F 74 (133)
T ss_dssp HHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT-------------------------T
T ss_pred HHHHHhcCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc-------------------------c
Confidence 3334456899999999 999999999999999 99888864 58899998753 1
Q ss_pred eCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 151 DLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 151 D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
|...++++.||+... ...|+++++|++|++.....|
T Consensus 75 ~~~~~l~~~~~v~~~--------~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQ--------DGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp TSSHHHHHHTTCGGG--------GCSSEEEEECTTSCEEEECCS
T ss_pred cchHHHHHHhCCccC--------CccceEEEECCCCCEEEEecC
Confidence 223456777777211 123577899999999866555
No 255
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.90 E-value=3.3e-09 Score=88.29 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=57.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|++||+|| ++||++|+.+.|.|+++.++++++ +.++.|+.|. ...+++
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~----------------------------~~~l~~ 71 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ----------------------------TAVYTQ 71 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT----------------------------CCHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc----------------------------CHHHHH
Confidence 5899999999 999999999999999999888543 7888887652 235678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
.|++ ..+|+++ ++++|+++.
T Consensus 72 ~~~v------~~~Pt~~-~~~~G~~v~ 91 (149)
T 3gix_A 72 YFDI------SYIPSTV-FFFNGQHMK 91 (149)
T ss_dssp HTTC------CSSSEEE-EEETTEEEE
T ss_pred HcCC------CccCeEE-EEECCeEEE
Confidence 8998 6788887 777999984
No 256
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.89 E-value=3.4e-09 Score=88.77 Aligned_cols=73 Identities=8% Similarity=0.030 Sum_probs=62.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|++||+|| ++||++|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 112 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQA----------------------------HPAVAG 112 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------STHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCc----------------------------cHHHHH
Confidence 5789999999 99999999999999999999865 48899888762 125778
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+|++ ..+|+++++ ++|+++..+.
T Consensus 113 ~~~i------~~~Pt~~~~-~~G~~~~~~~ 135 (155)
T 2ppt_A 113 RHRI------QGIPAFILF-HKGRELARAA 135 (155)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEE
T ss_pred HcCC------CcCCEEEEE-eCCeEEEEec
Confidence 8998 688998888 6999998665
No 257
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.89 E-value=6.7e-09 Score=80.58 Aligned_cols=74 Identities=9% Similarity=0.121 Sum_probs=60.3
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 67 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE----------------------------SPNVAS 67 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999998864 48888888753 235678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+||+ ..+|+++++ ++|+++..+..
T Consensus 68 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 91 (107)
T 1dby_A 68 EYGI------RSIPTIMVF-KGGKKCETIIG 91 (107)
T ss_dssp HHTC------CSSCEEEEE-SSSSEEEEEES
T ss_pred HCCC------CcCCEEEEE-eCCEEEEEEeC
Confidence 8998 678886665 79999886653
No 258
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.89 E-value=5.7e-09 Score=81.72 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=60.1
Q ss_pred CCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHH
Q psy17178 270 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLD 349 (384)
Q Consensus 270 Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 349 (384)
||+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|. ...+.+.
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~~ 73 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA----------------------------VAAVAEA 73 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------THHHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc----------------------------hHHHHHH
Confidence 899999999 99999999999999999998864 68898888753 2456788
Q ss_pred hCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 350 YGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 350 ~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
|++ ..+|+++ +.++|+++..+..
T Consensus 74 ~~v------~~~Pt~~-~~~~G~~~~~~~G 96 (112)
T 1ep7_A 74 AGI------TAMPTFH-VYKDGVKADDLVG 96 (112)
T ss_dssp HTC------CBSSEEE-EEETTEEEEEEES
T ss_pred cCC------CcccEEE-EEECCeEEEEEcC
Confidence 998 6788744 4589999987654
No 259
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.88 E-value=3e-09 Score=82.59 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=53.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|+++|+|| ++||++|....|.++++.+++ .++.++.|+.|.. ..+.+
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~~~~----------------------------~~l~~ 65 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENY--NYVEKIEILLQDM----------------------------QEIAG 65 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTC--TTEEEEEEEECCC---------------------------------
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHc--CCceEEEEECCCC----------------------------HHHHH
Confidence 5799999999 999999999999999999987 3688888886631 14566
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|++++++ +|+++..+..
T Consensus 66 ~~~v------~~~Pt~~~~~-~G~~~~~~~g 89 (105)
T 4euy_A 66 RYAV------FTGPTVLLFY-NGKEILRESR 89 (105)
T ss_dssp ----------CCCCEEEEEE-TTEEEEEEES
T ss_pred hcCC------CCCCEEEEEe-CCeEEEEEeC
Confidence 7888 6889988885 9999886653
No 260
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=9.4e-09 Score=83.09 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=61.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh---CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
.+|+++|+|| ++||++|+...|.++++.+++++ .++.++.|+.|. +..
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~ 74 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV----------------------------NQV 74 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT----------------------------CCH
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC----------------------------CHH
Confidence 4789999999 99999999999999999999974 458888887652 146
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+.+.|++ ..+|+++++++ |+++..+.
T Consensus 75 l~~~~~v------~~~Pt~~~~~~-g~~~~~~~ 100 (133)
T 1x5d_A 75 LASRYGI------RGFPTIKIFQK-GESPVDYD 100 (133)
T ss_dssp HHHHHTC------CSSSEEEEEET-TEEEEEEC
T ss_pred HHHhCCC------CeeCeEEEEeC-CCceEEec
Confidence 7888998 68999999997 88777665
No 261
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.88 E-value=7.3e-09 Score=103.45 Aligned_cols=72 Identities=3% Similarity=0.090 Sum_probs=55.8
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh--CCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhH
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 157 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~--~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 157 (384)
||+++|+|| ++||++|+..+|.+.++++++++ .++.++.|+.|. |...+++
T Consensus 30 ~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~--------------------------d~~~~l~ 82 (519)
T 3t58_A 30 SSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE--------------------------ETNSAVC 82 (519)
T ss_dssp SSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS--------------------------GGGHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc--------------------------cccHHHH
Confidence 589999999 99999999999999999999976 368888887653 1234678
Q ss_pred HhhcCcccCCCCcccceeEEEEEEEec---CCCcc
Q psy17178 158 LDYGVYLSDQGPVRGSLLSTAIFVYAL---TSPVN 189 (384)
Q Consensus 158 ~~ygv~~~~~g~~~g~~~~~~~~vid~---~G~v~ 189 (384)
+.||| .+ .|+++++++ +|++.
T Consensus 83 ~~~~V--------~~---~PTl~~f~~g~~~G~~~ 106 (519)
T 3t58_A 83 REFNI--------AG---FPTVRFFQAFTKNGSGA 106 (519)
T ss_dssp HHTTC--------CS---BSEEEEECTTCCSCCCE
T ss_pred HHcCC--------cc---cCEEEEEcCcccCCCce
Confidence 88888 33 346678886 56543
No 262
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.87 E-value=3e-09 Score=111.87 Aligned_cols=153 Identities=7% Similarity=0.101 Sum_probs=96.0
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcc
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 154 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~ 154 (384)
++++.|++++|.|| ++||++|+..+|.|.++++++++ ++.++.|+.+.. .
T Consensus 450 ~~~~~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~----------------------------~ 499 (780)
T 3apo_A 450 FPASDKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIH----------------------------E 499 (780)
T ss_dssp SCTTCCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC----------------------------H
T ss_pred HHHcCCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCC----------------------------H
Confidence 34457899999999 99999999999999999999974 588888876531 1
Q ss_pred hhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceeeeeccCCccceeeeeeechhhHHHHHHHHHHHHHHHHhh
Q psy17178 155 KISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGALYSRLGGRAWIRHCLLSACLVPVLVCATALVVNFIAMYY 234 (384)
Q Consensus 155 ~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~~p~~~g~~wk~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
.+++.||| .+. |+++++ ++|++. ...|. +.. .. + . -++-.. .
T Consensus 500 ~~~~~~~v--------~~~---Pt~~~~-~~g~~~-~~~g~-------~~~-~~-l---------~---~fi~~~----~ 541 (780)
T 3apo_A 500 GLCNMYNI--------QAY---PTTVVF-NQSSIH-EYEGH-------HSA-EQ-I---------L---EFIEDL----R 541 (780)
T ss_dssp HHHHHTTC--------CSS---SEEEEE-ETTEEE-EECSC-------SCH-HH-H---------H---HHHHHH----H
T ss_pred HHHHHcCC--------CcC---CeEEEE-cCCcee-eecCc-------ccH-HH-H---------H---HHHHhh----c
Confidence 26777887 332 344566 456541 11111 110 00 0 0 000000 0
Q ss_pred hccccCCCCCCCCCCceeeeEEcCcceeeecccc-----CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEE
Q psy17178 235 HASRAIPFVSKPAPFWQGTAVVDGQLKEIKLSDY-----YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVA 309 (384)
Q Consensus 235 ~~~~~~~~~g~~~P~f~l~~l~d~~g~~~~l~d~-----~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~ 309 (384)
. |.. ..+ +++ ++.++ +++.++|.|+ +.||+.|....|.+.++.+++++ .+.+..
T Consensus 542 ~------------~~v--~~l---~~~--~f~~~v~~~~~~~~~lv~F~-ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~ 600 (780)
T 3apo_A 542 N------------PSV--VSL---TPS--TFNELVKQRKHDEVWMVDFY-SPWSHPSQVLMPEWKRMARTLTG-LINVGS 600 (780)
T ss_dssp S------------CSE--EEC---CHH--HHHHHTTTCCTTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEE
T ss_pred c------------cce--eec---Ccc--cHHHHhhccCCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-CeEEEE
Confidence 0 111 112 222 22221 2466788888 99999999999999999999975 488888
Q ss_pred EeCCCHH
Q psy17178 310 ASVDSHF 316 (384)
Q Consensus 310 Is~d~~~ 316 (384)
|..+...
T Consensus 601 vd~~~~~ 607 (780)
T 3apo_A 601 VDCGQYH 607 (780)
T ss_dssp EETTTTH
T ss_pred EECcchH
Confidence 8766443
No 263
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=4.1e-09 Score=86.10 Aligned_cols=82 Identities=12% Similarity=0.025 Sum_probs=60.0
Q ss_pred ccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 267 DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 267 d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
+-++++++|+|| ++||++|+.+.|.++++.+++++.++.++.|+.|... .+
T Consensus 23 ~~~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~----------------------------~~ 73 (137)
T 2dj0_A 23 RDKRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT----------------------------DV 73 (137)
T ss_dssp HSTTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH----------------------------HH
T ss_pred cCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH----------------------------HH
Confidence 345679999999 9999999999999999999997667888888776422 23
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.+.|++.....-..+|+++++ ++|+++..+.
T Consensus 74 ~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~ 104 (137)
T 2dj0_A 74 STRYKVSTSPLTKQLPTLILF-QGGKEAMRRP 104 (137)
T ss_dssp HHHTTCCCCSSSSCSSEEEEE-SSSSEEEEES
T ss_pred HHHccCcccCCcCCCCEEEEE-ECCEEEEEec
Confidence 444555100000378988888 7999988665
No 264
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.87 E-value=7.9e-09 Score=80.24 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=61.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||+.|....|.++++.+++++ .+.++.|+.|. ...+.+
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 69 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDE----------------------------NQKIAD 69 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEcccc----------------------------CHHHHH
Confidence 5899999999 99999999999999999998864 47888887642 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 70 ~~~i------~~~Pt~~~~-~~g~~~~~~~g 93 (109)
T 3tco_A 70 KYSV------LNIPTTLIF-VNGQLVDSLVG 93 (109)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred hcCc------ccCCEEEEE-cCCcEEEeeec
Confidence 8888 688999999 89999987654
No 265
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.87 E-value=9.2e-09 Score=79.63 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=61.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 68 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD----------------------------NPETPN 68 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT----------------------------CCHHHH
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999999864 58888888763 125678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+|++ ..+|+++++ ++|+++..+.
T Consensus 69 ~~~v------~~~Pt~~~~-~~G~~~~~~~ 91 (107)
T 2i4a_A 69 AYQV------RSIPTLMLV-RDGKVIDKKV 91 (107)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEE
T ss_pred hcCC------CccCEEEEE-eCCEEEEEec
Confidence 8998 688999998 8999998665
No 266
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.87 E-value=7.1e-09 Score=86.48 Aligned_cols=73 Identities=11% Similarity=0.186 Sum_probs=62.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||++||+|| ++||++|+...|.++++.+++ .++.++.|+.|. ...+.+
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~----------------------------~~~l~~ 79 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEG----------------------------VPEVSE 79 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT----------------------------SHHHHH
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCC----------------------------CHHHHH
Confidence 4899999999 999999999999999999887 468899888763 135678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|++++++ +|+++..+..
T Consensus 80 ~~~v------~~~Pt~~~~~-~G~~~~~~~G 103 (153)
T 2wz9_A 80 KYEI------SSVPTFLFFK-NSQKIDRLDG 103 (153)
T ss_dssp HTTC------CSSSEEEEEE-TTEEEEEEES
T ss_pred HcCC------CCCCEEEEEE-CCEEEEEEeC
Confidence 8998 6899999999 9999886653
No 267
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.87 E-value=6.6e-09 Score=80.79 Aligned_cols=73 Identities=10% Similarity=0.072 Sum_probs=60.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||++|....|.++++.+++ .++.++.|+.|.. ..+.+
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~----------------------------~~~~~ 68 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQC----------------------------QGTAA 68 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS----------------------------HHHHH
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccC----------------------------HHHHH
Confidence 5899999999 999999999999999999988 4688888887631 34667
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 69 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 92 (107)
T 1gh2_A 69 TNNI------SATPTFQFF-RNKVRIDQYQG 92 (107)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred hcCC------CcccEEEEE-ECCeEEEEEeC
Confidence 8888 678987777 79999886653
No 268
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.87 E-value=6.6e-09 Score=82.82 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=59.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||++|....|.++++.+++++ +.++.|+.|. +..+.+
T Consensus 33 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~----------------------------~~~~~~ 81 (122)
T 2vlu_A 33 AKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE----------------------------LKPIAE 81 (122)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT----------------------------CHHHHH
T ss_pred cCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC----------------------------CHHHHH
Confidence 5899999999 99999999999999999988753 8888888763 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+||+ ..+|+++++ ++|+++..+..
T Consensus 82 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 105 (122)
T 2vlu_A 82 QFSV------EAMPTFLFM-KEGDVKDRVVG 105 (122)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcccEEEEE-eCCEEEEEEeC
Confidence 8888 678875544 89999886653
No 269
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.87 E-value=7.5e-09 Score=80.44 Aligned_cols=73 Identities=11% Similarity=0.154 Sum_probs=60.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|.. ..+.+
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~----------------------------~~~~~ 68 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN----------------------------PGTAP 68 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC----------------------------TTHHH
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC----------------------------HHHHH
Confidence 5789999999 99999999999999999998864 488888877631 24677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+||+ ..+|+++++ ++|+++..+.
T Consensus 69 ~~~v------~~~Pt~~~~-~~G~~~~~~~ 91 (108)
T 2trx_A 69 KYGI------RGIPTLLLF-KNGEVAATKV 91 (108)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEE
T ss_pred HcCC------cccCEEEEE-eCCEEEEEEe
Confidence 8998 688999988 7999988665
No 270
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.86 E-value=7.8e-09 Score=82.26 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=67.2
Q ss_pred cceeeeccc-c--CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcc
Q psy17178 259 QLKEIKLSD-Y--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLK 335 (384)
Q Consensus 259 ~g~~~~l~d-~--~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 335 (384)
+|...++.+ . .||+++|+|| ++||+.|....|.|+++.+++ .++.++.|+.|..
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~-------------------- 65 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKN-------------------- 65 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTC--------------------
T ss_pred cCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCC--------------------
Confidence 555555552 3 4899999999 999999999999999999888 6789999987631
Q ss_pred eeEEecCchHHHHHhCceecCCCceeeEEEEEeC---CceEEEEEec
Q psy17178 336 IPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECY---KMVIVYWFER 379 (384)
Q Consensus 336 ~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~---~G~i~~~~~~ 379 (384)
..+.+.|++ ..+|++++++. +|+++..+..
T Consensus 66 --------~~~~~~~~i------~~~Pt~~~~~~~~~~G~~~~~~~G 98 (118)
T 2f51_A 66 --------GNAADAYGV------SSIPALFFVKKEGNEIKTLDQFVG 98 (118)
T ss_dssp --------HHHHHHTTC------CSSSEEEEEEEETTEEEEEEEEES
T ss_pred --------HHHHHhcCC------CCCCEEEEEeCCCCcceEEEeecC
Confidence 346788998 68899999976 4999987664
No 271
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.86 E-value=7e-09 Score=80.10 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=62.1
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
++.+||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|. ...
T Consensus 16 ~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~----------------------------~~~ 64 (105)
T 3m9j_A 16 DAAGDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDD----------------------------CQD 64 (105)
T ss_dssp HHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTT----------------------------CHH
T ss_pred HhcCCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhh----------------------------hHH
Confidence 3446899999999 9999999999999999999884 48888888652 134
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.+.|++ ..+|+++++ ++|+++..+..
T Consensus 65 ~~~~~~v------~~~Pt~~~~-~~g~~~~~~~g 91 (105)
T 3m9j_A 65 VASESEV------KSMPTFQFF-KKGQKVGEFSG 91 (105)
T ss_dssp HHHHTTC------CBSSEEEEE-ETTEEEEEEES
T ss_pred HHHHcCC------CcCcEEEEE-ECCeEEEEEeC
Confidence 6778888 688998888 68998886664
No 272
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.86 E-value=5.4e-09 Score=83.52 Aligned_cols=75 Identities=12% Similarity=0.090 Sum_probs=62.3
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||+.|....|.++++.++++++++.++.|+.|. ...+.+
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~----------------------------~~~~~~ 82 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE----------------------------QSQIAQ 82 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT----------------------------CHHHHH
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC----------------------------CHHHHH
Confidence 6789999999 99999999999999999998877678899888763 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 83 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 106 (121)
T 2j23_A 83 EVGI------RAMPTFVFF-KNGQKIDTVVG 106 (121)
T ss_dssp HHTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcccEEEEE-ECCeEEeeEcC
Confidence 8998 678887777 59999887653
No 273
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.85 E-value=3.8e-09 Score=86.19 Aligned_cols=80 Identities=13% Similarity=-0.009 Sum_probs=61.4
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++ +++|+|| ++||++|+.+.|.++++.++++ +.++.|+.++...... .|....+.+
T Consensus 31 ~~-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~-------------------~d~~~~l~~ 86 (135)
T 3emx_A 31 QG-DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERE-------------------LSAARLEMN 86 (135)
T ss_dssp TS-SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHH-------------------HHHHHHHHH
T ss_pred CC-cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhh-------------------hhhhHHHHH
Confidence 44 8999999 9999999999999999998774 8899998865432211 123367789
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+||+ ..+|++++++ +|+++..+..
T Consensus 87 ~~~v------~~~Pt~~~~~-~G~~v~~~~G 110 (135)
T 3emx_A 87 KAGV------EGTPTLVFYK-EGRIVDKLVG 110 (135)
T ss_dssp HHTC------CSSSEEEEEE-TTEEEEEEES
T ss_pred HcCC------ceeCeEEEEc-CCEEEEEEeC
Confidence 9999 6889555555 9999997764
No 274
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.85 E-value=3.3e-09 Score=83.18 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=59.7
Q ss_pred cccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcch
Q psy17178 76 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 155 (384)
Q Consensus 76 ~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 155 (384)
.+.+||+++|.|| ++|||+|+...|.+.++.++++ ++.++.|+.++ ...+
T Consensus 20 ~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~---------------------------~~~~ 69 (111)
T 2pu9_C 20 KAAGDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKT 69 (111)
T ss_dssp TTCTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHH
T ss_pred HhcCCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc---------------------------chHH
Confidence 3446899999999 9999999999999999998875 58888887762 1346
Q ss_pred hHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 156 ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 156 ~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+++.||+ ++++ + ++++++|++.....|.
T Consensus 70 ~~~~~~v--------~~~P---t-~~~~~~G~~~~~~~G~ 97 (111)
T 2pu9_C 70 LAKELGI--------RVVP---T-FKILKENSVVGEVTGA 97 (111)
T ss_dssp HHHHHCC--------SBSS---E-EEEESSSSEEEEEESS
T ss_pred HHHHcCC--------Ceee---E-EEEEeCCcEEEEEcCC
Confidence 7788888 3333 3 6788999987655554
No 275
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.85 E-value=8e-09 Score=79.86 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=61.4
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
.+.+||+++|+|| ++||+.|....|.++++.++++ .++.++.|+.|. ...
T Consensus 16 ~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~----------------------------~~~ 65 (106)
T 1xwb_A 16 TKASGKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDE----------------------------CED 65 (106)
T ss_dssp HHHTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTT----------------------------CHH
T ss_pred HhcCCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccc----------------------------hHH
Confidence 3447899999999 9999999999999999998886 468888888762 235
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.+.|++ ..+|+.++ .++|+++..+..
T Consensus 66 ~~~~~~v------~~~Pt~~~-~~~G~~~~~~~g 92 (106)
T 1xwb_A 66 IAMEYNI------SSMPTFVF-LKNGVKVEEFAG 92 (106)
T ss_dssp HHHHTTC------CSSSEEEE-EETTEEEEEEES
T ss_pred HHHHcCC------CcccEEEE-EcCCcEEEEEcC
Confidence 6778888 67887544 479999887664
No 276
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.85 E-value=3.9e-09 Score=85.40 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=61.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|.. ..+.+
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~----------------------------~~l~~ 88 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN----------------------------PGTAP 88 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC----------------------------CTTSG
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC----------------------------HHHHH
Confidence 5799999999 99999999999999999998864 488998887631 13456
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 89 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 112 (128)
T 2o8v_B 89 KYGI------RGIPTLLLF-KNGEVAATKVG 112 (128)
T ss_dssp GGTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CccCEEEEE-eCCEEEEEEcC
Confidence 7888 688999999 89999986653
No 277
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.85 E-value=5.2e-09 Score=82.88 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=60.7
Q ss_pred ccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCch
Q psy17178 265 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 344 (384)
Q Consensus 265 l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 344 (384)
+++.+||+++|+|| ++||++|....|.++++.+++ ++.++.|+.|. ..
T Consensus 28 l~~~~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~----------------------------~~ 75 (117)
T 2xc2_A 28 LEQHKNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK----------------------------LE 75 (117)
T ss_dssp HHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT----------------------------SH
T ss_pred HHhCCCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc----------------------------cH
Confidence 34457899999999 999999999999999998876 68888888752 23
Q ss_pred HHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 345 KISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 345 ~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.+.++||+ ..+|+++++ ++|+++..+..
T Consensus 76 ~~~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 103 (117)
T 2xc2_A 76 ETARKYNI------SAMPTFIAI-KNGEKVGDVVG 103 (117)
T ss_dssp HHHHHTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HHHHHcCC------CccceEEEE-eCCcEEEEEeC
Confidence 56778998 678875555 79999887654
No 278
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.85 E-value=1e-08 Score=78.75 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=61.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||+.|....|.++++.+++++ +.++.|+.|. +..+.+
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~----------------------------~~~~~~ 63 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE----------------------------NPDIAA 63 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT----------------------------CHHHHH
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999988854 8898888753 235678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|+++++ ++|+++..+..
T Consensus 64 ~~~v------~~~Pt~~~~-~~g~~~~~~~g 87 (104)
T 2e0q_A 64 RYGV------MSLPTVIFF-KDGEPVDEIIG 87 (104)
T ss_dssp HTTC------CSSCEEEEE-ETTEEEEEEES
T ss_pred hCCc------cccCEEEEE-ECCeEhhhccC
Confidence 8988 678998888 79999886653
No 279
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=9.2e-09 Score=82.56 Aligned_cols=68 Identities=12% Similarity=0.110 Sum_probs=56.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+++ ++|+|| ++||++|....|.+.++++++++.++.++.|+.|. +..+.+
T Consensus 22 ~~~-vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~~~ 71 (126)
T 1x5e_A 22 EGD-WMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE----------------------------QPGLSG 71 (126)
T ss_dssp SSE-EEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT----------------------------CHHHHH
T ss_pred CCC-EEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC----------------------------CHHHHH
Confidence 444 899999 99999999999999999999987679999888662 134678
Q ss_pred HhCceecCCCceeeEEEEEeCCceE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.|++ ..+|+++++ ++|++
T Consensus 72 ~~~v------~~~Pt~~~~-~~G~~ 89 (126)
T 1x5e_A 72 RFII------NALPTIYHC-KDGEF 89 (126)
T ss_dssp HTTC------CSSSEEEEE-ETTEE
T ss_pred HcCC------cccCEEEEE-eCCeE
Confidence 8998 688999999 79996
No 280
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.84 E-value=1e-08 Score=81.09 Aligned_cols=73 Identities=15% Similarity=0.210 Sum_probs=59.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||+.|....|.++++.+++++ +.++.|+.|. +..+.+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~----------------------------~~~l~~ 77 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE----------------------------SPDIAK 77 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT----------------------------CHHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC----------------------------CHHHHH
Confidence 5899999999 99999999999999999988753 8888888763 134677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|+++++ ++|+++..+..
T Consensus 78 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 101 (114)
T 2oe3_A 78 ECEV------TAMPTFVLG-KDGQLIGKIIG 101 (114)
T ss_dssp HTTC------CSBSEEEEE-ETTEEEEEEES
T ss_pred HCCC------CcccEEEEE-eCCeEEEEEeC
Confidence 8888 678886554 89999886654
No 281
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=5.6e-10 Score=90.22 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=62.0
Q ss_pred ceEEccccCCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCcccee
Q psy17178 71 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIP 147 (384)
Q Consensus 71 ~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p 147 (384)
+.+++++.+||+++|.|| ++|||+|+...|.+ .++.+.++ .++.++.|..|.
T Consensus 18 ~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~----------------------- 72 (130)
T 2kuc_A 18 EALKRAEVEDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEK----------------------- 72 (130)
T ss_dssp HHHHHHHHHSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSS-----------------------
T ss_pred HHHHHHHhcCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCC-----------------------
Confidence 456667778999999999 99999999999998 55544443 345666665543
Q ss_pred EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 148 LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 148 ~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
|...++++.||+ .+ .|+++++|++|++.....|..
T Consensus 73 ---~~~~~~~~~~~v--------~~---~Pt~~~~d~~G~~~~~~~G~~ 107 (130)
T 2kuc_A 73 ---GEGVELRKKYGV--------HA---YPTLLFINSSGEVVYRLVGAE 107 (130)
T ss_dssp ---TTHHHHHHHTTC--------CS---SCEEEEECTTSCEEEEEESCC
T ss_pred ---cchHHHHHHcCC--------CC---CCEEEEECCCCcEEEEecCCC
Confidence 234567788888 22 357789999999976555543
No 282
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.83 E-value=1.2e-08 Score=78.52 Aligned_cols=76 Identities=16% Similarity=0.243 Sum_probs=61.1
Q ss_pred cccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchH
Q psy17178 266 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 345 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 345 (384)
++..||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|. ...
T Consensus 15 ~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~----------------------------~~~ 63 (104)
T 2vim_A 15 NENKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ----------------------------NEE 63 (104)
T ss_dssp HTTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHH
T ss_pred HhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC----------------------------CHH
Confidence 3447899999999 9999999999999999998874 78999988762 135
Q ss_pred HHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 346 ISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 346 ~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.+.|++ ...|+.+++ ++|+++..+..
T Consensus 64 ~~~~~~v------~~~Pt~~~~-~~g~~~~~~~G 90 (104)
T 2vim_A 64 AAAKYSV------TAMPTFVFI-KDGKEVDRFSG 90 (104)
T ss_dssp HHHHTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HHHHcCC------ccccEEEEE-eCCcEEEEEeC
Confidence 6778888 678886666 59999886654
No 283
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.83 E-value=2.4e-09 Score=86.82 Aligned_cols=81 Identities=9% Similarity=0.007 Sum_probs=58.7
Q ss_pred cceeeecccc-CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 259 QLKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 259 ~g~~~~l~d~-~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
+++.+...-. .+|+++|+|| ++||++|....|.|+++++++++ .++.++.|+.+..
T Consensus 13 ~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~--------------------- 70 (133)
T 2dj3_A 13 VGKTFDAIVMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN--------------------- 70 (133)
T ss_dssp CTTTCCCCCTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS---------------------
T ss_pred cCCCHHHHhccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC---------------------
Confidence 4444443333 4899999999 99999999999999999999975 3577777765421
Q ss_pred eEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 337 PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 337 ~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
..+.+.|++ ..+|++++++++|++.
T Consensus 71 -------~~~~~~~~v------~~~Pt~~~~~~g~~~~ 95 (133)
T 2dj3_A 71 -------DITNDQYKV------EGFPTIYFAPSGDKKN 95 (133)
T ss_dssp -------CCCCSSCCC------SSSSEEEEECTTCTTS
T ss_pred -------HHHHhhcCC------CcCCEEEEEeCCCccc
Confidence 011235777 6789999998776554
No 284
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.83 E-value=9.3e-09 Score=80.54 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=60.2
Q ss_pred cCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHH
Q psy17178 268 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 347 (384)
Q Consensus 268 ~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 347 (384)
..||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|. ...+.
T Consensus 24 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~----------------------------~~~~~ 72 (113)
T 1ti3_A 24 GSQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE----------------------------LKAVA 72 (113)
T ss_dssp TSSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT----------------------------CHHHH
T ss_pred hcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc----------------------------cHHHH
Confidence 45899999999 9999999999999999998874 68888888753 23567
Q ss_pred HHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 348 LDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 348 ~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+.||+ ..+|+++++ ++|+++..+..
T Consensus 73 ~~~~v------~~~Pt~~~~-~~G~~~~~~~g 97 (113)
T 1ti3_A 73 EEWNV------EAMPTFIFL-KDGKLVDKTVG 97 (113)
T ss_dssp HHHHC------SSTTEEEEE-ETTEEEEEEEC
T ss_pred HhCCC------CcccEEEEE-eCCEEEEEEec
Confidence 78888 678887777 69999887654
No 285
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.33 E-value=3.9e-10 Score=91.20 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=64.2
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
.+.++++..+||+++|+|| ++||++|+...|.+ +++.+.+++ ++.++.|+.|+.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~--------------------- 65 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP--------------------- 65 (130)
Confidence 5677888889999999999 99999999999999 888877653 467777766532
Q ss_pred eEEecCchHHHHHhCceecCCCceeeEEEEEeC-CceE--EEEEe
Q psy17178 337 PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECY-KMVI--VYWFE 378 (384)
Q Consensus 337 ~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~-~G~i--~~~~~ 378 (384)
....+.+.|++ ..+|+++++|+ +|++ +..+.
T Consensus 66 -----~~~~~~~~~~v------~~~Pt~~~~d~~~G~~~~~~~~~ 99 (130)
T 2lst_A 66 -----EGQELARRYRV------PGTPTFVFLVPKAGAWEEVGRLF 99 (130)
Confidence 12345667887 67888888885 5887 55443
No 286
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.82 E-value=7.4e-09 Score=83.48 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=59.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||++|+...|.++++.+++++ .+.++.|+.|. +..+.+
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~l~~ 83 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNADK----------------------------HQSLGG 83 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 37888877542 246778
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.|++ ..+|++++++++|+++..+.
T Consensus 84 ~~~v------~~~Pt~~~~~~~~~~~~~~~ 107 (130)
T 2dml_A 84 QYGV------QGFPTIKIFGANKNKPEDYQ 107 (130)
T ss_dssp HHTC------CSSSEEEEESSCTTSCEECC
T ss_pred HcCC------CccCEEEEEeCCCCeEEEee
Confidence 8998 68899999998887444443
No 287
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.81 E-value=7.9e-09 Score=81.23 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=59.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. +.++++
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 65 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE----------------------------NQETAG 65 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------CCSHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC----------------------------CHHHHH
Confidence 6899999999 99999999999999999999864 68888888653 124677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ .+ .|+++++ ++|++.....|..
T Consensus 66 ~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~~ 91 (112)
T 2voc_A 66 KYGV--------MS---IPTLLVL-KDGEVVETSVGFK 91 (112)
T ss_dssp HTTC--------CS---BSEEEEE-ETTEEEEEEESCC
T ss_pred HcCC--------Cc---ccEEEEE-eCCEEEEEEeCCC
Confidence 8888 22 3456677 8999876555544
No 288
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.81 E-value=1.1e-09 Score=93.07 Aligned_cols=48 Identities=15% Similarity=0.094 Sum_probs=41.8
Q ss_pred EccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 74 KLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 74 ~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+++++||++||+|| ++|||+|+.++|.|.++++++. ++.++.|+.|.
T Consensus 48 ~l~~~~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~ 95 (167)
T 1z6n_A 48 RLQRIERRYRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGR 95 (167)
T ss_dssp HHHTCCSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHH
T ss_pred HHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCC
Confidence 466788999999999 9999999999999999998763 68888887764
No 289
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.80 E-value=1.5e-08 Score=79.53 Aligned_cols=73 Identities=7% Similarity=0.138 Sum_probs=59.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|.. ..+.+
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~----------------------------~~~~~ 73 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEV----------------------------SEVTE 73 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTT----------------------------HHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCC----------------------------HHHHH
Confidence 6899999999 9999999999999999998874 588998887632 25677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|++++ .++|+++..+..
T Consensus 74 ~~~v------~~~Pt~~~-~~~G~~~~~~~G 97 (112)
T 1syr_A 74 KENI------TSMPTFKV-YKNGSSVDTLLG 97 (112)
T ss_dssp HTTC------CSSSEEEE-EETTEEEEEEES
T ss_pred HcCC------CcccEEEE-EECCcEEEEEeC
Confidence 8888 67887544 469999886653
No 290
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.80 E-value=1.8e-08 Score=78.63 Aligned_cols=74 Identities=8% Similarity=0.050 Sum_probs=61.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|. ...+.+
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 70 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEE----------------------------EKTLFQ 70 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCc----------------------------ChhHHH
Confidence 5789999999 99999999999999999998864 48888888752 135677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|+++++ ++|+++..+..
T Consensus 71 ~~~v------~~~Pt~~~~-~~g~~~~~~~g 94 (111)
T 3gnj_A 71 RFSL------KGVPQILYF-KDGEYKGKMAG 94 (111)
T ss_dssp HTTC------CSSCEEEEE-ETTEEEEEEES
T ss_pred hcCC------CcCCEEEEE-ECCEEEEEEec
Confidence 8888 688998888 68998876663
No 291
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.80 E-value=1.6e-08 Score=81.47 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=60.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|++||+|| ++||++|....|.++++.+++ .++.++.|+.|. ...+.+
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~----------------------------~~~l~~ 84 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADN----------------------------NSEIVS 84 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCC----------------------------CHHHHH
Confidence 6899999999 999999999999999999888 368999998863 235678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 85 ~~~v------~~~Pt~~i~-~~G~~~~~~~G 108 (125)
T 1r26_A 85 KCRV------LQLPTFIIA-RSGKMLGHVIG 108 (125)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcccEEEEE-eCCeEEEEEeC
Confidence 8998 678885555 89999886654
No 292
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.80 E-value=1.9e-08 Score=77.91 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=61.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 66 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE----------------------------NPKTAM 66 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC----------------------------CHhHHH
Confidence 5789999999 99999999999999999998864 48888888763 134677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 67 ~~~v------~~~Pt~~~~-~~g~~~~~~~g 90 (109)
T 2yzu_A 67 RYRV------MSIPTVILF-KDGQPVEVLVG 90 (109)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred hCCC------CcCCEEEEE-eCCcEeeeEeC
Confidence 8888 678999888 79999886653
No 293
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.80 E-value=1.6e-08 Score=82.89 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=60.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||+.|....|.+.++.+++++ ++.++.|+.|.. ..+.+
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~----------------------------~~l~~ 72 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN----------------------------PWTAE 72 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC----------------------------HHHHH
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC----------------------------HhHHH
Confidence 4799999999 99999999999999999999875 388888886532 35677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 73 ~~~v------~~~Pt~~~~-~~G~~~~~~~G 96 (140)
T 3hz4_A 73 KYGV------QGTPTFKFF-CHGRPVWEQVG 96 (140)
T ss_dssp HHTC------CEESEEEEE-ETTEEEEEEES
T ss_pred HCCC------CcCCEEEEE-eCCcEEEEEcC
Confidence 8998 688976666 79999886653
No 294
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.79 E-value=7.8e-09 Score=85.25 Aligned_cols=71 Identities=8% Similarity=-0.007 Sum_probs=57.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||++|+.+.|.++++++++++ ++.++.|+.|... .+.+
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~----------------------------~~~~ 71 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVP----------------------------DFNK 71 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCC----------------------------TTTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCH----------------------------HHHH
Confidence 4899999999 99999999999999999999854 4889999887321 2355
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
+|++ ...|++++++ +|+++..
T Consensus 72 ~~~i------~~~Pt~~~~~-~G~~v~~ 92 (142)
T 1qgv_A 72 MYEL------YDPCTVMFFF-RNKHIMI 92 (142)
T ss_dssp SSCS------CSSCEEEEEE-TTEEEEE
T ss_pred HcCC------CCCCEEEEEE-CCcEEEE
Confidence 6888 6789888885 7888764
No 295
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.79 E-value=1.3e-08 Score=80.30 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=59.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|. ...+.+
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~----------------------------~~~~~~ 75 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE----------------------------LKDVAE 75 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------SHHHHH
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc----------------------------CHHHHH
Confidence 4899999999 9999999999999999998875 68888888752 235677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+++++ ++|+++..+..
T Consensus 76 ~~~v------~~~Pt~~~~-~~g~~~~~~~g 99 (118)
T 2vm1_A 76 AYNV------EAMPTFLFI-KDGEKVDSVVG 99 (118)
T ss_dssp HTTC------CSBSEEEEE-ETTEEEEEEES
T ss_pred HcCC------CcCcEEEEE-eCCeEEEEecC
Confidence 8888 678886666 79999886654
No 296
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.79 E-value=9.5e-09 Score=80.57 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=59.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|+++|+|| ++||++|....|.++++.+++. ++.++.|+.|. ...+.+
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~----------------------------~~~l~~ 66 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA----------------------------RPELMK 66 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG----------------------------CHHHHH
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC----------------------------CHHHHH
Confidence 5689999999 9999999999999999887763 57777776542 245678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+||+ ..+|+++++ ++|+++..+..
T Consensus 67 ~~~v------~~~Pt~~~~-~~G~~v~~~~G 90 (110)
T 2l6c_A 67 ELGF------ERVPTLVFI-RDGKVAKVFSG 90 (110)
T ss_dssp HTTC------CSSCEEEEE-ESSSEEEEEES
T ss_pred HcCC------cccCEEEEE-ECCEEEEEEcC
Confidence 8998 688999998 79999886653
No 297
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.79 E-value=6.2e-09 Score=85.10 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=58.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCC--cEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
.+|++||+|| ++||++|+...|.+.++++++++.+ +.++.|+.+. +..+
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 83 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS----------------------------ASML 83 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT----------------------------CHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc----------------------------cHHH
Confidence 5799999999 9999999999999999999998764 6666665432 2467
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.+.|++ ..+|+++++ ++|+ +..+.
T Consensus 84 ~~~~~v------~~~Pt~~~~-~~G~-~~~~~ 107 (140)
T 2dj1_A 84 ASKFDV------SGYPTIKIL-KKGQ-AVDYD 107 (140)
T ss_dssp HHHTTC------CSSSEEEEE-ETTE-EEECC
T ss_pred HHHCCC------CccCeEEEE-ECCc-EEEcC
Confidence 788998 688999999 6898 44343
No 298
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.78 E-value=4.4e-10 Score=95.20 Aligned_cols=95 Identities=9% Similarity=0.001 Sum_probs=65.9
Q ss_pred CCCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCcc
Q psy17178 247 APFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPR 326 (384)
Q Consensus 247 ~P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~ 326 (384)
.+++...++ + +.++....+||++||+|| ++||++|+.+.|.|+++.+.++. ++.++.|++|..... .
T Consensus 27 ~~~i~w~~~---~-~~~~~~~~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~------~- 93 (164)
T 1sen_A 27 GDHIHWRTL---E-DGKKEAAASGLPLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEP------K- 93 (164)
T ss_dssp CTTSCBCCH---H-HHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSC------S-
T ss_pred cccccccCH---H-HHHHHHHhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchH------H-
Confidence 444554433 3 457777778999999999 99999999999999998766543 467788887643210 0
Q ss_pred ccCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 327 KEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 327 ~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.+.|++. +..+|+++++|++|+++..+.
T Consensus 94 --------------------~~~~~~~----~~~~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 94 --------------------DEDFSPD----GGYIPRILFLDPSGKVHPEII 121 (164)
T ss_dssp --------------------CGGGCTT----CSCSSEEEEECTTSCBCTTCC
T ss_pred --------------------HHHhccc----CCcCCeEEEECCCCCEEEEEe
Confidence 1123331 135899999999999886544
No 299
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.75 E-value=1.3e-08 Score=80.66 Aligned_cols=77 Identities=10% Similarity=0.054 Sum_probs=59.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++|||+|+...|.++++.++++ ..++.++++..... +....+.+
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~----------------------~~~~~~~~ 81 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQL----------------------NDLQAFRS 81 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGH----------------------HHHHHHHH
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcH----------------------HHHHHHHH
Confidence 5789999999 9999999999999999998774 45667777643211 11245678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.||+ ..+|++++++ +|+++..+.
T Consensus 82 ~~~i------~~~Pt~~~~~-~G~~~~~~~ 104 (118)
T 1zma_A 82 RYGI------PTVPGFVHIT-DGQINVRCD 104 (118)
T ss_dssp HHTC------CSSCEEEEEE-TTEEEEECC
T ss_pred HcCC------CCCCeEEEEE-CCEEEEEec
Confidence 8999 6889988885 899887554
No 300
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.75 E-value=3.4e-08 Score=76.06 Aligned_cols=74 Identities=9% Similarity=0.062 Sum_probs=59.3
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|. +..+.+
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 66 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE----------------------------APGIAT 66 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc----------------------------hHHHHH
Confidence 4789999999 99999999999999999998864 38888887663 135677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|+.+++ ++|+++..+..
T Consensus 67 ~~~v------~~~Pt~~~~-~~g~~~~~~~G 90 (105)
T 1fb6_A 67 QYNI------RSIPTVLFF-KNGERKESIIG 90 (105)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEEE
T ss_pred hCCC------CcccEEEEE-eCCeEEEEEec
Confidence 8888 678876555 69999886653
No 301
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.74 E-value=5.9e-09 Score=86.32 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=51.6
Q ss_pred CCCCCCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.|.++|+....++ +++.+...-..||+++|.|| ++||++|+...|.+.++.+++++ ++.++.|+.|
T Consensus 31 ~~~~~~~~~v~~l---~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 96 (148)
T 3p2a_A 31 CGHSLFDGEVINA---TAETLDKLLQDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTE 96 (148)
T ss_dssp TCCBTTCCCCEEC---CTTTHHHHTTCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT
T ss_pred cCCccccCCceec---CHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECc
Confidence 4667777777665 55555433346799999999 99999999999999999999864 4888888765
No 302
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.74 E-value=5.4e-09 Score=82.86 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=57.8
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcc
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 154 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~ 154 (384)
+++.+||+++|.|| ++||++|+...|.+.++.+++++ +.++.|+.|. ..
T Consensus 26 l~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~----------------------------~~ 74 (116)
T 3qfa_C 26 LDAAGDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD----------------------------CQ 74 (116)
T ss_dssp HHHHTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT----------------------------TH
T ss_pred HHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC----------------------------CH
Confidence 44457899999999 99999999999999999988754 8888887653 23
Q ss_pred hhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 155 KISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 155 ~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++++.||+ .+++ +++++ ++|++.....|.
T Consensus 75 ~l~~~~~v--------~~~P---t~~~~-~~G~~~~~~~G~ 103 (116)
T 3qfa_C 75 DVASECEV--------KSMP---TFQFF-KKGQKVGEFSGA 103 (116)
T ss_dssp HHHHHTTC--------CSSS---EEEEE-SSSSEEEEEESC
T ss_pred HHHHHcCC--------cccc---EEEEE-eCCeEEEEEcCC
Confidence 56777887 3333 33344 889887655554
No 303
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.73 E-value=1.2e-08 Score=81.55 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=59.0
Q ss_pred cccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcch
Q psy17178 76 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 155 (384)
Q Consensus 76 ~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 155 (384)
.+.+||+++|.|| ++|||+|+...|.+.++.++++ ++.++.|+.+. ...+
T Consensus 33 ~~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~---------------------------~~~~ 82 (124)
T 1faa_A 33 KAAGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKT 82 (124)
T ss_dssp HHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHH
T ss_pred HhcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc---------------------------chHH
Confidence 3446899999999 9999999999999999998875 58888887652 1245
Q ss_pred hHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 156 ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 156 ~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+++.||+ ++++ +++++++|++.....|.
T Consensus 83 ~~~~~~v--------~~~P----t~~~~~~G~~~~~~~G~ 110 (124)
T 1faa_A 83 LAKELGI--------RVVP----TFKILKENSVVGEVTGA 110 (124)
T ss_dssp HHHHHCC--------SSSS----EEEEEETTEEEEEEESS
T ss_pred HHHHcCC--------Ceee----EEEEEeCCcEEEEEcCC
Confidence 7778888 3333 25677899887655554
No 304
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.7e-08 Score=79.08 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=37.6
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
+||+++|.|| ++|||+|+...|.+.++.++++..++.++.|+.|.
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 64 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE 64 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc
Confidence 4789999999 99999999999999999998765678888888764
No 305
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.72 E-value=5.1e-09 Score=85.60 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=61.1
Q ss_pred ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEe
Q psy17178 71 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLS 150 (384)
Q Consensus 71 ~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~ 150 (384)
+.+++++.+||+++|.|| ++||++|+...|.++++.+++ .++.++.|+.|.
T Consensus 37 ~~~~~~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~-------------------------- 87 (139)
T 3d22_A 37 QKLSEASRDGKIVLANFS-ARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDE-------------------------- 87 (139)
T ss_dssp HHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT--------------------------
T ss_pred HHHHHHhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcc--------------------------
Confidence 345555567999999999 999999999999999999887 368888888763
Q ss_pred eCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 151 DLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 151 D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
..++++.||+ .+ .|+++++ ++|++.....|.
T Consensus 88 --~~~~~~~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~ 118 (139)
T 3d22_A 88 --LSDFSASWEI--------KA---TPTFFFL-RDGQQVDKLVGA 118 (139)
T ss_dssp --SHHHHHHTTC--------CE---ESEEEEE-ETTEEEEEEESC
T ss_pred --cHHHHHHcCC--------Cc---ccEEEEE-cCCeEEEEEeCC
Confidence 2357777888 23 3344444 899987655554
No 306
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.72 E-value=1.6e-08 Score=81.11 Aligned_cols=80 Identities=13% Similarity=0.153 Sum_probs=63.3
Q ss_pred cccCCCeEEEEEEeCC-------CCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeE
Q psy17178 266 SDYYGKYLVFFFYPLD-------FTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPL 338 (384)
Q Consensus 266 ~d~~Gk~vvl~F~~a~-------~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (384)
.+.+||+++|+|| ++ ||++|....|.++++++++++ ++.++.|++++.. .|.
T Consensus 20 ~~~~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~~~---------------- 78 (123)
T 1wou_A 20 EQHNGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKP---YWK---------------- 78 (123)
T ss_dssp HTTTTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHH---HHH----------------
T ss_pred HHhCCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCch---hhh----------------
Confidence 3345899999999 99 999999999999999987753 6899999987532 222
Q ss_pred EecCchHHHHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 339 LSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 339 ~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
|....+.+.|++ ..+|+++++++.+++.
T Consensus 79 --d~~~~~~~~~~i------~~~Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 79 --DPNNDFRKNLKV------TAVPTLLKYGTPQKLV 106 (123)
T ss_dssp --CTTCHHHHHHCC------CSSSEEEETTSSCEEE
T ss_pred --chhHHHHHHCCC------CeeCEEEEEcCCceEe
Confidence 334567888999 7899999998755554
No 307
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.71 E-value=7.3e-09 Score=91.18 Aligned_cols=91 Identities=10% Similarity=0.037 Sum_probs=70.1
Q ss_pred CCceeeeEEcCcceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccc
Q psy17178 248 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRK 327 (384)
Q Consensus 248 P~f~l~~l~d~~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~ 327 (384)
++..+.++ +++.+.....+||+++|+|| ++||++|....|.++++.+++++ .+.++.|+.|..
T Consensus 95 ~~~~v~~l---~~~~f~~~~~~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~------------ 157 (210)
T 3apq_A 95 DDPEIITL---ERREFDAAVNSGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD------------ 157 (210)
T ss_dssp TCTTSEEC---CHHHHHHHHHHSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC------------
T ss_pred CCCceEEe---cHHHHHHHHccCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc------------
Confidence 34445544 66666555567899999999 99999999999999999998854 488888886532
Q ss_pred cCCCCCcceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 328 EGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 328 ~~~~~~~~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..+.+.|++ ..+|+++++ ++|+++..+.
T Consensus 158 ----------------~~l~~~~~v------~~~Pt~~~~-~~G~~~~~~~ 185 (210)
T 3apq_A 158 ----------------RMLCRMKGV------NSYPSLFIF-RSGMAAVKYN 185 (210)
T ss_dssp ----------------HHHHHHTTC------CSSSEEEEE-CTTSCCEECC
T ss_pred ----------------HHHHHHcCC------CcCCeEEEE-ECCCceeEec
Confidence 256777888 678988888 8999877555
No 308
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.71 E-value=1.1e-09 Score=92.83 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=46.7
Q ss_pred CCccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 57 APFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 57 aP~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++++...++ + +.+++...+||++||+|| ++|||+|+.++|.|.++.+.++. ++.++.|+.|.
T Consensus 27 ~~~i~w~~~---~-~~~~~~~~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~ 88 (164)
T 1sen_A 27 GDHIHWRTL---E-DGKKEAAASGLPLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLED 88 (164)
T ss_dssp CTTSCBCCH---H-HHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG
T ss_pred cccccccCH---H-HHHHHHHhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC
Confidence 344544444 3 556677778999999999 99999999999999998765543 46677777664
No 309
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.70 E-value=6.7e-08 Score=76.59 Aligned_cols=74 Identities=14% Similarity=0.099 Sum_probs=60.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.||+++|+|| ++||+.|....|.++++.+++++ ++.++.|+.|. ...+.+
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 78 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT----------------------------NPETAR 78 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 48888888763 134677
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|+++++ ++|+++..+..
T Consensus 79 ~~~i------~~~Pt~~~~-~~g~~~~~~~G 102 (121)
T 2i1u_A 79 NFQV------VSIPTLILF-KDGQPVKRIVG 102 (121)
T ss_dssp HTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred hcCC------CcCCEEEEE-ECCEEEEEecC
Confidence 8888 678887776 59999886653
No 310
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.70 E-value=2.4e-08 Score=77.75 Aligned_cols=75 Identities=12% Similarity=0.050 Sum_probs=58.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhC--CcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI--NTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
++|+++|+|| ++||++|....|.++++.+++.+. ++.++.|+.|. +..+
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~l 70 (111)
T 3uvt_A 20 AEGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA----------------------------ERNI 70 (111)
T ss_dssp HSSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT----------------------------CHHH
T ss_pred cCCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc----------------------------cHhH
Confidence 3789999999 999999999999999999876543 57777777552 1346
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.+.|++ ..+|+++++ ++|+++..+..
T Consensus 71 ~~~~~v------~~~Pt~~~~-~~g~~~~~~~g 96 (111)
T 3uvt_A 71 CSKYSV------RGYPTLLLF-RGGKKVSEHSG 96 (111)
T ss_dssp HHHTTC------CSSSEEEEE-ETTEEEEEECS
T ss_pred HHhcCC------CcccEEEEE-eCCcEEEeccC
Confidence 778888 678887766 68998886653
No 311
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.70 E-value=7.8e-09 Score=82.38 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=63.4
Q ss_pred CCCCCCccEEEeeecCccceEEcccc--CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHh
Q psy17178 53 LSKPAPFWQGTAVVDGQLKEIKLSDY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLA 130 (384)
Q Consensus 53 ~G~~aP~f~l~~~~~~~g~~~~l~~~--~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~ 130 (384)
.|.+.|.+...+. +.-.-.+.+. .||+++|.|| ++|||+|+...|.|.++.+++.+ +.++.|+.|.
T Consensus 8 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~------ 75 (122)
T 2vlu_A 8 AAVAAEVISVHSL---EQWTMQIEEANTAKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE------ 75 (122)
T ss_dssp ----CCCEEECSH---HHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT------
T ss_pred cCCCCcceeccCH---HHHHHHHHHhhccCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC------
Confidence 5666677765332 2222223332 5889999999 99999999999999999988753 8888887754
Q ss_pred hccCccccCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 131 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 131 ~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
..++++.||+ ++++ + +++.++|++.....|.
T Consensus 76 ----------------------~~~~~~~~~v--------~~~P---t-~~~~~~G~~~~~~~G~ 106 (122)
T 2vlu_A 76 ----------------------LKPIAEQFSV--------EAMP---T-FLFMKEGDVKDRVVGA 106 (122)
T ss_dssp ----------------------CHHHHHHTTC--------CSSS---E-EEEEETTEEEEEEESS
T ss_pred ----------------------CHHHHHHcCC--------Cccc---E-EEEEeCCEEEEEEeCc
Confidence 2346777887 3333 2 4555899886544443
No 312
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.69 E-value=7.6e-09 Score=84.24 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=38.7
Q ss_pred ccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 69 QLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 69 ~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
++-.-.+++.+||++||.|| ++||++|+...|.|.++.+++ ++.++.|+.|
T Consensus 29 ~~~~~~l~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~ 79 (133)
T 3cxg_A 29 GSLNQVFSSTQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVD 79 (133)
T ss_dssp THHHHHHTC-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETT
T ss_pred hHHHHHHHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEecc
Confidence 33334456777899999999 999999999999998887665 4666666644
No 313
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.15 E-value=1.9e-09 Score=87.06 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=63.1
Q ss_pred cceEEccccCCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccce
Q psy17178 70 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 146 (384)
Q Consensus 70 g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~ 146 (384)
.+.+++...+||+++|+|| ++|||+|+...|.+ .++.+.++. ++.++.|+.|..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~--------------------- 65 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP--------------------- 65 (130)
Confidence 4567788888999999999 99999999999998 777776643 466666655431
Q ss_pred eEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEec-CCCc--ccccceee
Q psy17178 147 PLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYAL-TSPV--NGYAGGAL 196 (384)
Q Consensus 147 p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~-~G~v--~~~~~g~~ 196 (384)
...++++.||+ ...|+++++|+ +|++ .....|..
T Consensus 66 -----~~~~~~~~~~v-----------~~~Pt~~~~d~~~G~~~~~~~~~G~~ 102 (130)
T 2lst_A 66 -----EGQELARRYRV-----------PGTPTFVFLVPKAGAWEEVGRLFGSR 102 (130)
Confidence 12345666777 33567788996 5888 65566654
No 314
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.69 E-value=2.3e-08 Score=80.25 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=56.5
Q ss_pred cCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhH
Q psy17178 78 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 157 (384)
Q Consensus 78 ~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 157 (384)
.+||+++|.|| ++|||+|+...|.|.++.+++. ++.++.|+.|. ..+++
T Consensus 36 ~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~----------------------------~~~l~ 84 (124)
T 1xfl_A 36 ESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE----------------------------LKSVA 84 (124)
T ss_dssp HTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT----------------------------SHHHH
T ss_pred hcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc----------------------------CHHHH
Confidence 46899999999 9999999999999999998874 68888887642 23567
Q ss_pred HhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 158 LDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 158 ~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
+.||+ .+++ + +++.++|++.....|
T Consensus 85 ~~~~v--------~~~P---t-~~~~~~G~~~~~~~G 109 (124)
T 1xfl_A 85 SDWAI--------QAMP---T-FMFLKEGKILDKVVG 109 (124)
T ss_dssp HHTTC--------CSSS---E-EEEEETTEEEEEEES
T ss_pred HHcCC--------CccC---E-EEEEECCEEEEEEeC
Confidence 78888 3333 2 455589988765555
No 315
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.68 E-value=3.6e-08 Score=87.58 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=60.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
++|+++|+|| ++||++|+.+.|.+++++++++++ +.++.|+.|.. ..+.+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~----------------------------~~l~~ 78 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQN----------------------------PGTAP 78 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTC----------------------------TTTGG
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCC----------------------------HHHHH
Confidence 5789999999 999999999999999999998754 88999987631 12356
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+|++ ..+|++++++ +|+++..+..
T Consensus 79 ~~~v------~~~Pt~~~~~-~G~~~~~~~G 102 (222)
T 3dxb_A 79 KYGI------RGIPTLLLFK-NGEVAATKVG 102 (222)
T ss_dssp GGTC------CSBSEEEEEE-TTEEEEEEES
T ss_pred HcCC------CcCCEEEEEE-CCeEEEEecc
Confidence 7888 6788877775 8999886653
No 316
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.68 E-value=2.3e-08 Score=81.54 Aligned_cols=70 Identities=13% Similarity=0.260 Sum_probs=55.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|+++|.|| ++||++|+...|.|.++.+++++ ++.++.|+.|. ..++++
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 86 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK----------------------------EQELAG 86 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC----------------------------CHHHHH
Confidence 3689999999 99999999999999999998864 48888887653 125677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
.||+ . ..|+++++|++|++.
T Consensus 87 ~~~v--------~---~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 87 AFGI--------R---SIPSILFIPMEGKPE 106 (136)
T ss_dssp HTTC--------C---SSCEEEEECSSSCCE
T ss_pred HcCC--------C---CCCEEEEECCCCcEE
Confidence 7887 2 235678999999986
No 317
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.68 E-value=3.1e-08 Score=78.83 Aligned_cols=69 Identities=12% Similarity=0.049 Sum_probs=56.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|+|| ++||++|....|.++++.+++++ ++.++.|+.|.. ..+.+
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~ 69 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY----------------------------PQTCQ 69 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC----------------------------HHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC----------------------------HHHHH
Confidence 5789999999 99999999999999999999865 588988887632 24567
Q ss_pred HhCceecCCCceeeEEEEEeCCceE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.|++ ..+|++++++++|++
T Consensus 70 ~~~v------~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 70 KAGI------KAYPSVKLYQYERAK 88 (122)
T ss_dssp HTTC------CSSSEEEEEEEEGGG
T ss_pred HcCC------CccceEEEEeCCCcc
Confidence 7888 678888888877764
No 318
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.68 E-value=2.4e-08 Score=77.80 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=57.1
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcc
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 154 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~ 154 (384)
+++..+|+++|.|| ++||++|+...|.+.++.+++. ++.++.|+.|. ..
T Consensus 15 l~~~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~----------------------------~~ 63 (105)
T 3zzx_A 15 LNEAGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDE----------------------------CE 63 (105)
T ss_dssp HHHTTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTT----------------------------CH
T ss_pred HHhcCCCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEeccc----------------------------CH
Confidence 34456789999999 9999999999999999988764 46666555432 34
Q ss_pred hhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 155 KISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 155 ~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
++++.||| ++++ ++++-++|++.....|.
T Consensus 64 ~l~~~~~V--------~~~P----T~~~~~~G~~v~~~~G~ 92 (105)
T 3zzx_A 64 DIAQDNQI--------ACMP----TFLFMKNGQKLDSLSGA 92 (105)
T ss_dssp HHHHHTTC--------CBSS----EEEEEETTEEEEEEESC
T ss_pred HHHHHcCC--------Ceec----EEEEEECCEEEEEEeCc
Confidence 57888998 4444 34555899887766663
No 319
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.68 E-value=1.5e-08 Score=80.53 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=43.7
Q ss_pred cceeeecc-ccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh----CCcEEEEEeCC
Q psy17178 259 QLKEIKLS-DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ----INTEVVAASVD 313 (384)
Q Consensus 259 ~g~~~~l~-d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~----~~v~vv~Is~d 313 (384)
+++.+... ..++|+++|+|| ++||++|+...|.++++.+++++ .++.++.|+.+
T Consensus 13 ~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 13 VAKNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cccCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 45555443 236899999999 99999999999999999999975 26888888766
No 320
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.68 E-value=4.8e-08 Score=78.50 Aligned_cols=70 Identities=7% Similarity=-0.014 Sum_probs=56.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh----CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCch
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ----INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 344 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 344 (384)
.+|+++|+|| ++||++|+...|.++++.+++.. .++.++.|+.|. ..
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~----------------------------~~ 82 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK----------------------------YP 82 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT----------------------------CH
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc----------------------------cH
Confidence 4799999999 99999999999999999998863 346666666542 24
Q ss_pred HHHHHhCceecCCCceeeEEEEEeCCceE
Q psy17178 345 KISLDYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 345 ~~~~~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.+.++|++ ..+|+++++++.+++
T Consensus 83 ~l~~~~~v------~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 83 DVIERMRV------SGFPTMRYYTRIDKQ 105 (127)
T ss_dssp HHHHHTTC------CSSSEEEEECSSCSS
T ss_pred hHHHhcCC------ccCCEEEEEeCCCCC
Confidence 56788888 688999999877764
No 321
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.66 E-value=2.4e-08 Score=77.05 Aligned_cols=76 Identities=11% Similarity=0.127 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. +.++++
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 65 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE----------------------------NPETTS 65 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC----------------------------CHHHHH
Confidence 5689999999 99999999999999999988864 48888887653 134667
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ .+ .|+++++ ++|++.....|..
T Consensus 66 ~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~~ 91 (105)
T 1nsw_A 66 QFGI--------MS---IPTLILF-KGGRPVKQLIGYQ 91 (105)
T ss_dssp HTTC--------CS---SSEEEEE-ETTEEEEEEESCC
T ss_pred HcCC--------cc---ccEEEEE-eCCeEEEEEecCC
Confidence 7887 22 2455666 8998876555544
No 322
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.66 E-value=5.6e-08 Score=86.86 Aligned_cols=81 Identities=10% Similarity=0.020 Sum_probs=62.1
Q ss_pred cceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCC--cEEEEEeCCCHHhHHHHhcCccccCCCCCcce
Q psy17178 259 QLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKI 336 (384)
Q Consensus 259 ~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 336 (384)
+++.++..-.+||+++|+|| ++||++|+.+.|.+.++++++++.+ +.++.|+.|.
T Consensus 21 ~~~~~~~~~~~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~---------------------- 77 (241)
T 3idv_A 21 NDANFDNFVADKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS---------------------- 77 (241)
T ss_dssp CTTTHHHHHTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT----------------------
T ss_pred cccCHHHHHhcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC----------------------
Confidence 44444443447899999999 9999999999999999999998765 6777776542
Q ss_pred eEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 337 PLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 337 ~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
+..+.++||+ ..+|++++++ +|+++.
T Consensus 78 ------~~~l~~~~~v------~~~Pt~~~~~-~g~~~~ 103 (241)
T 3idv_A 78 ------ASVLASRFDV------SGYPTIKILK-KGQAVD 103 (241)
T ss_dssp ------CHHHHHHTTC------CSSSEEEEEE-TTEEEE
T ss_pred ------CHHHHHhcCC------CcCCEEEEEc-CCCccc
Confidence 2357788998 6889888886 566553
No 323
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.66 E-value=2.4e-08 Score=78.12 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=55.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
+||+++|.|| ++||++|+...|.+.++.+++. ++.++.|+.|. ..++++
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~----------------------------~~~l~~ 71 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDE----------------------------LGDVAQ 71 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CHHHHH
Confidence 5799999999 9999999999999999999874 47777776542 234677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.|++ +++ |++++++ +|++.....|.
T Consensus 72 ~~~v--------~~~---Pt~~~~~-~G~~~~~~~G~ 96 (109)
T 3f3q_A 72 KNEV--------SAM---PTLLLFK-NGKEVAKVVGA 96 (109)
T ss_dssp HTTC--------CSS---SEEEEEE-TTEEEEEEESS
T ss_pred HcCC--------Ccc---CEEEEEE-CCEEEEEEeCC
Confidence 7777 233 3455666 88876655554
No 324
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.65 E-value=3.5e-08 Score=79.09 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=56.5
Q ss_pred CCCeEEEEEEeCCCCc--------------CchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCc
Q psy17178 269 YGKYLVFFFYPLDFTF--------------VCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKL 334 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~--------------~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~ 334 (384)
+||+++|+|| ++||+ +|....|.++++.+++++ ++.++.|+.|..
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~------------------- 78 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN------------------- 78 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC-------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC-------------------
Confidence 5899999999 99999 999999999999998865 488888887631
Q ss_pred ceeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 335 KIPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 335 ~~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
..+.++||+ ..+|+++++ ++|+++..+..
T Consensus 79 ---------~~l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 107 (123)
T 1oaz_A 79 ---------PGTAPKYGI------RGIPTLLLF-KNGEVAATKVG 107 (123)
T ss_dssp ---------TTTGGGGTC------CBSSEEEEE-ESSSEEEEEES
T ss_pred ---------HHHHHHcCC------CccCEEEEE-ECCEEEEEEeC
Confidence 235678998 689999999 89999886653
No 325
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.64 E-value=3.3e-08 Score=77.32 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. +.++++
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 71 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE----------------------------NPGTAA 71 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 48888887654 234677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ .+++ + +++.++|++.....|..
T Consensus 72 ~~~v--------~~~P---t-~~~~~~G~~~~~~~G~~ 97 (112)
T 1t00_A 72 KYGV--------MSIP---T-LNVYQGGEVAKTIVGAK 97 (112)
T ss_dssp HTTC--------CSSS---E-EEEEETTEEEEEEESCC
T ss_pred hCCC--------Cccc---E-EEEEeCCEEEEEEeCCC
Confidence 7887 3333 2 34458998865555543
No 326
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.63 E-value=2.4e-08 Score=83.01 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=53.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|++||+|| ++||++|+.+.|.|.++.+++++. +.++.|+.|. ..++++
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~----------------------------~~~l~~ 71 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ----------------------------TAVYTQ 71 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT----------------------------CCHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc----------------------------CHHHHH
Confidence 4799999999 999999999999999999887543 7777776542 235777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccc
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGY 191 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~ 191 (384)
.|+| .++ |++ +++++|++...
T Consensus 72 ~~~v--------~~~---Pt~-~~~~~G~~v~~ 92 (149)
T 3gix_A 72 YFDI--------SYI---PST-VFFFNGQHMKV 92 (149)
T ss_dssp HTTC--------CSS---SEE-EEEETTEEEEE
T ss_pred HcCC--------Ccc---CeE-EEEECCeEEEe
Confidence 8888 232 333 48889988643
No 327
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.63 E-value=1.6e-08 Score=84.63 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=57.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.++++||.|| ++||++|+...|.|+++.+++++ ++.++.|+.|. ..++++
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 112 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQA----------------------------HPAVAG 112 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------STHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCc----------------------------cHHHHH
Confidence 5789999999 99999999999999999999865 48888887753 125777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.||| +++ |+++++ ++|++.....|.
T Consensus 113 ~~~i--------~~~---Pt~~~~-~~G~~~~~~~G~ 137 (155)
T 2ppt_A 113 RHRI--------QGI---PAFILF-HKGRELARAAGA 137 (155)
T ss_dssp HTTC--------CSS---SEEEEE-ETTEEEEEEESC
T ss_pred HcCC--------CcC---CEEEEE-eCCeEEEEecCC
Confidence 8888 233 344555 789887655554
No 328
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.62 E-value=5.3e-08 Score=75.38 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=56.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. ..++++
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 67 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE----------------------------SPNVAS 67 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 48888887653 235777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ .+++ ++ ++.++|++.....|..
T Consensus 68 ~~~v--------~~~P---t~-~~~~~G~~~~~~~G~~ 93 (107)
T 1dby_A 68 EYGI--------RSIP---TI-MVFKGGKKCETIIGAV 93 (107)
T ss_dssp HHTC--------CSSC---EE-EEESSSSEEEEEESCC
T ss_pred HCCC--------CcCC---EE-EEEeCCEEEEEEeCCC
Confidence 8888 2333 33 4448998876555543
No 329
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.62 E-value=1.1e-07 Score=77.63 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=59.4
Q ss_pred cceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeE
Q psy17178 259 QLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPL 338 (384)
Q Consensus 259 ~g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (384)
+++.+...-.+++.++|+|| ++||++|....|.++++.+++++ ++.++.|+.|..
T Consensus 39 ~~~~~~~~~~~~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~----------------------- 93 (140)
T 1v98_A 39 DEKGFAQEVAGAPLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH----------------------- 93 (140)
T ss_dssp ----------CCCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-----------------------
T ss_pred CHHHHHHHHHcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-----------------------
Confidence 34444433223434899999 99999999999999999998864 488888887631
Q ss_pred EecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 339 LSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 339 ~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
..+.+.|++ ..+|+++++ ++|+++..+..
T Consensus 94 -----~~l~~~~~v------~~~Pt~~~~-~~G~~~~~~~G 122 (140)
T 1v98_A 94 -----PGLAARYGV------RSVPTLVLF-RRGAPVATWVG 122 (140)
T ss_dssp -----HHHHHHTTC------CSSSEEEEE-ETTEEEEEEES
T ss_pred -----HHHHHHCCC------CccCEEEEE-eCCcEEEEEeC
Confidence 246778888 678988888 69999886653
No 330
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.62 E-value=4.6e-08 Score=75.47 Aligned_cols=44 Identities=9% Similarity=0.144 Sum_probs=38.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++|+++|.|| ++|||+|+...|.+.++.++++++ +.++.|+.|.
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 61 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE 61 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc
Confidence 6889999999 999999999999999999998653 8888887653
No 331
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.62 E-value=6.4e-08 Score=75.82 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=56.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.|++++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. ..++++
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 73 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDP----------------------------NPTTVK 73 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTT----------------------------CHHHHH
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999998864 38888887653 124677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.||+ .+ .|+++++ ++|++.....|.
T Consensus 74 ~~~v--------~~---~Pt~~~~-~~G~~~~~~~g~ 98 (115)
T 1thx_A 74 KYKV--------EG---VPALRLV-KGEQILDSTEGV 98 (115)
T ss_dssp HTTC--------CS---SSEEEEE-ETTEEEEEEESC
T ss_pred HcCC--------Cc---eeEEEEE-cCCEEEEEecCC
Confidence 7887 22 2455666 899887554443
No 332
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.62 E-value=5.6e-08 Score=75.93 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=56.5
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHHh
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLD 159 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 159 (384)
||+++|.|| ++|||+|+...|.|.++.+++++ ++.++.|+.|. ..++++.
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~~ 73 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA----------------------------VAAVAEA 73 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------THHHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc----------------------------hHHHHHH
Confidence 899999999 99999999999999999998864 68888887753 2356777
Q ss_pred hcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 160 YGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 160 ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
||+ ++++ + +++.++|++.....|.
T Consensus 74 ~~v--------~~~P---t-~~~~~~G~~~~~~~G~ 97 (112)
T 1ep7_A 74 AGI--------TAMP---T-FHVYKDGVKADDLVGA 97 (112)
T ss_dssp HTC--------CBSS---E-EEEEETTEEEEEEESC
T ss_pred cCC--------Cccc---E-EEEEECCeEEEEEcCC
Confidence 887 3333 2 4556899887655554
No 333
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.61 E-value=4.3e-08 Score=77.87 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.|.++.+++++ ++.++.|+.|. ..++++
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~----------------------------~~~l~~ 79 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD----------------------------HTDLAI 79 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT----------------------------THHHHH
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 58888887653 234777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.|++ .++ |+++++ ++|++.....|.
T Consensus 80 ~~~v--------~~~---Pt~~~~-~~G~~~~~~~G~ 104 (119)
T 1w4v_A 80 EYEV--------SAV---PTVLAM-KNGDVVDKFVGI 104 (119)
T ss_dssp HTTC--------CSS---SEEEEE-ETTEEEEEEESC
T ss_pred HcCC--------Ccc---cEEEEE-eCCcEEEEEcCC
Confidence 7887 222 345555 899886554443
No 334
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=5.3e-08 Score=79.40 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=40.4
Q ss_pred cccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 76 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 76 ~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+-++++++|.|| ++||++|+...|.+.++.+++++.++.++.|+.|.
T Consensus 22 ~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 22 ERDKRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp HHSTTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred hcCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 3335679999999 99999999999999999999976678888877654
No 335
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.59 E-value=3.8e-08 Score=90.67 Aligned_cols=77 Identities=10% Similarity=0.242 Sum_probs=57.9
Q ss_pred cCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhH
Q psy17178 78 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 157 (384)
Q Consensus 78 ~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 157 (384)
-+||+++|+|| ++||++|+...|.+.++.+++++ ++.++.|+.|.. .+++
T Consensus 24 ~~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~ 73 (287)
T 3qou_A 24 SMTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE----------------------------QMIA 73 (287)
T ss_dssp TTTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC----------------------------HHHH
T ss_pred cCCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC----------------------------HHHH
Confidence 35899999999 99999999999999999999874 488888877631 2567
Q ss_pred HhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 158 LDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 158 ~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+.||| ++++ +++++ ++|++.....|..
T Consensus 74 ~~~~v--------~~~P---t~~~~-~~G~~~~~~~g~~ 100 (287)
T 3qou_A 74 AQFGL--------RAIP---TVYLF-QNGQPVDGFQGPQ 100 (287)
T ss_dssp HTTTC--------CSSS---EEEEE-ETTEEEEEEESCC
T ss_pred HHcCC--------CCCC---eEEEE-ECCEEEEEeeCCC
Confidence 77887 3333 44555 6888776555543
No 336
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.59 E-value=7.1e-08 Score=74.51 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=57.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+++++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. ..++++
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 68 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD----------------------------NPETPN 68 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT----------------------------CCHHHH
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999998864 68888887653 125677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.||+ .+ .|+++++ ++|++.....|.
T Consensus 69 ~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~ 93 (107)
T 2i4a_A 69 AYQV--------RS---IPTLMLV-RDGKVIDKKVGA 93 (107)
T ss_dssp HTTC--------CS---SSEEEEE-ETTEEEEEEESC
T ss_pred hcCC--------Cc---cCEEEEE-eCCEEEEEecCC
Confidence 7887 22 2455666 899887655554
No 337
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.58 E-value=4.7e-08 Score=77.24 Aligned_cols=76 Identities=20% Similarity=0.278 Sum_probs=56.4
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcc
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 154 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~ 154 (384)
+++.+||+++|.|| ++|||+|+...|.+.++.+++ ++.++.|+.|. ..
T Consensus 28 l~~~~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~----------------------------~~ 75 (117)
T 2xc2_A 28 LEQHKNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK----------------------------LE 75 (117)
T ss_dssp HHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT----------------------------SH
T ss_pred HHhCCCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc----------------------------cH
Confidence 44457899999999 999999999999999988776 68888887652 23
Q ss_pred hhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 155 KISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 155 ~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
++++.||+ .+++ + +++.++|++.....|
T Consensus 76 ~~~~~~~v--------~~~P---t-~~~~~~G~~~~~~~G 103 (117)
T 2xc2_A 76 ETARKYNI--------SAMP---T-FIAIKNGEKVGDVVG 103 (117)
T ss_dssp HHHHHTTC--------CSSS---E-EEEEETTEEEEEEES
T ss_pred HHHHHcCC--------Cccc---e-EEEEeCCcEEEEEeC
Confidence 46777887 3333 2 455588988765555
No 338
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.57 E-value=8.2e-08 Score=74.03 Aligned_cols=47 Identities=23% Similarity=0.300 Sum_probs=39.7
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+++.+||+++|.|| ++|||+|+...|.+.++.++++ .++.++.|+.|
T Consensus 15 l~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~ 61 (106)
T 1xwb_A 15 LTKASGKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVD 61 (106)
T ss_dssp HHHHTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETT
T ss_pred HHhcCCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEecc
Confidence 33457899999999 9999999999999999998886 46888888765
No 339
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.57 E-value=6.7e-08 Score=74.94 Aligned_cols=75 Identities=16% Similarity=0.330 Sum_probs=56.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. ..++++
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 68 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ----------------------------NPGTAP 68 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT----------------------------CTTHHH
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC----------------------------CHHHHH
Confidence 4789999999 99999999999999999998864 47787777653 124667
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.||+ .++ |+++++ ++|++.....|.
T Consensus 69 ~~~v--------~~~---Pt~~~~-~~G~~~~~~~G~ 93 (108)
T 2trx_A 69 KYGI--------RGI---PTLLLF-KNGEVAATKVGA 93 (108)
T ss_dssp HTTC--------CSS---SEEEEE-ETTEEEEEEESC
T ss_pred HcCC--------ccc---CEEEEE-eCCEEEEEEecC
Confidence 7887 232 345566 799887655554
No 340
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.57 E-value=6.3e-08 Score=80.65 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=56.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
+||++||.|| ++||++|+...|.+.++.+++ .++.++.|+.|. ..++++
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~----------------------------~~~l~~ 79 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEG----------------------------VPEVSE 79 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT----------------------------SHHHHH
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCC----------------------------CHHHHH
Confidence 4899999999 999999999999999999887 368888887653 125777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
.||+ .+ .|++++++ +|++.....|
T Consensus 80 ~~~v--------~~---~Pt~~~~~-~G~~~~~~~G 103 (153)
T 2wz9_A 80 KYEI--------SS---VPTFLFFK-NSQKIDRLDG 103 (153)
T ss_dssp HTTC--------CS---SSEEEEEE-TTEEEEEEES
T ss_pred HcCC--------CC---CCEEEEEE-CCEEEEEEeC
Confidence 7887 22 34677888 9988654444
No 341
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.57 E-value=1.2e-07 Score=76.29 Aligned_cols=70 Identities=16% Similarity=0.251 Sum_probs=53.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++ .+.++.|+.|. ..++++
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~l~~ 83 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNADK----------------------------HQSLGG 83 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCC----------------------------CHHHHH
Confidence 3689999999 99999999999999999998864 37777776542 235777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
.|++ ++ .|++++++++|.+.
T Consensus 84 ~~~v--------~~---~Pt~~~~~~~~~~~ 103 (130)
T 2dml_A 84 QYGV--------QG---FPTIKIFGANKNKP 103 (130)
T ss_dssp HHTC--------CS---SSEEEEESSCTTSC
T ss_pred HcCC--------Cc---cCEEEEEeCCCCeE
Confidence 7887 22 34677888888743
No 342
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.57 E-value=4.7e-08 Score=77.94 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=39.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
+||+++|.|| ++|||+|+...|.+.++.+++++.++.++.|+.|.
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~ 76 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE 76 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC
Confidence 5789999999 99999999999999999988876678888887653
No 343
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.56 E-value=7.9e-08 Score=75.85 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=37.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+||+++|.|| ++|||+|+...|.|.++.+++.+ +.++.|+.|
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~ 70 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVD 70 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC
Confidence 5789999999 99999999999999999988753 888888765
No 344
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.56 E-value=4.1e-08 Score=76.04 Aligned_cols=42 Identities=17% Similarity=0.252 Sum_probs=36.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+|+++|+|| ++||++|+...|.+.++.+++. ++.++.|+.|
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~ 58 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQ 58 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEEC
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECC
Confidence 5789999999 9999999999999999998873 6778777765
No 345
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.56 E-value=2.4e-08 Score=78.78 Aligned_cols=70 Identities=13% Similarity=0.179 Sum_probs=55.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhC--CcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI--NTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
+||+++|.|| ++||+.|....|.++++.+++++. ++.++.|..+. +..+
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 73 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE----------------------------ESDL 73 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT----------------------------CCSS
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC----------------------------CHHH
Confidence 5899999999 999999999999999999988754 35555555431 1256
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
.++|++ ..+|+++++ ++|+++
T Consensus 74 ~~~~~v------~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 74 AQQYGV------RGYPTIKFF-RNGDTA 94 (120)
T ss_dssp HHHHTC------CSSSEEEEE-ESSCSS
T ss_pred HHHCCC------CcccEEEEE-eCCCcC
Confidence 788998 688999998 588765
No 346
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.56 E-value=4.1e-08 Score=79.24 Aligned_cols=75 Identities=15% Similarity=0.285 Sum_probs=56.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++ ++.++.|+.|.. .++++
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~----------------------------~~l~~ 88 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN----------------------------PGTAP 88 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC----------------------------CTTSG
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC----------------------------HHHHH
Confidence 5789999999 99999999999999999998864 488888876631 13556
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.|++ .+ .|+++++ ++|++.....|.
T Consensus 89 ~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~ 113 (128)
T 2o8v_B 89 KYGI--------RG---IPTLLLF-KNGEVAATKVGA 113 (128)
T ss_dssp GGTC--------CS---SSEEEEE-ETTEEEEEEESC
T ss_pred HcCC--------Cc---cCEEEEE-eCCEEEEEEcCC
Confidence 6777 22 3455666 899887555554
No 347
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.55 E-value=5.8e-08 Score=75.99 Aligned_cols=75 Identities=8% Similarity=0.090 Sum_probs=54.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|+++|.|| ++|||+|+...|.+.++.+++. ++.++.|+.+. ..++++
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~----------------------------~~~l~~ 66 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA----------------------------RPELMK 66 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG----------------------------CHHHHH
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC----------------------------CHHHHH
Confidence 4689999999 9999999999999998877653 56666665432 344777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ ++ .|+++++ ++|++.....|..
T Consensus 67 ~~~v--------~~---~Pt~~~~-~~G~~v~~~~G~~ 92 (110)
T 2l6c_A 67 ELGF--------ER---VPTLVFI-RDGKVAKVFSGIM 92 (110)
T ss_dssp HTTC--------CS---SCEEEEE-ESSSEEEEEESCC
T ss_pred HcCC--------cc---cCEEEEE-ECCEEEEEEcCCC
Confidence 7887 22 3455666 8998876666654
No 348
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.55 E-value=5.6e-08 Score=82.65 Aligned_cols=88 Identities=3% Similarity=-0.109 Sum_probs=60.2
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHH---HHHHHHHHHhCCcEEEEEeCCCHHhH-HHHhcCccccCCCCCcc
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILA---FNDRLEEFHQINTEVVAASVDSHFTH-LAWVNTPRKEGGLGKLK 335 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~---l~~l~~~~~~~~v~vv~Is~d~~~~~-~~~~~~~~~~~~~~~~~ 335 (384)
.+.+..+...||+|+|+|| ++||++|+...+. ..++.+.+++ ++.++.|..|...++ +.|.+
T Consensus 29 ~ea~~~A~~~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~------------ 94 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMT------------ 94 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHH------------
T ss_pred HHHHHHHHHhCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHH------------
Confidence 4456666778999999999 9999999997773 2345555543 467777776632222 22221
Q ss_pred eeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceEEEE
Q psy17178 336 IPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 336 ~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
.+...+|+ ...|+++++|++|++++.
T Consensus 95 ---------~~q~~~gv------~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 95 ---------VCQIILGR------GGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ---------HHHHHHSC------CCSSEEEEECTTSCEEEE
T ss_pred ---------HHHHHcCC------CCCcceeeECCCCCceee
Confidence 11223577 689999999999999985
No 349
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.55 E-value=5.7e-08 Score=77.14 Aligned_cols=53 Identities=11% Similarity=0.049 Sum_probs=42.3
Q ss_pred ccceEEcc-cc--CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 69 QLKEIKLS-DY--YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 69 ~g~~~~l~-~~--~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
+|...++. .+ .||+++|.|| ++|||+|+...|.|.++.+++ .++.++.|+.|.
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~ 64 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK 64 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred cCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC
Confidence 44444444 23 4789999999 999999999999999999888 578888887754
No 350
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.55 E-value=7.6e-08 Score=73.94 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=39.0
Q ss_pred cccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 76 SDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 76 ~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
++..||+++|.|| ++|||+|+...|.+.++.+++. ++.++.|+.|
T Consensus 15 ~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~ 59 (104)
T 2vim_A 15 NENKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVD 59 (104)
T ss_dssp HTTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT
T ss_pred HhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEecc
Confidence 3446899999999 9999999999999999998874 7888888775
No 351
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.54 E-value=8.6e-08 Score=74.24 Aligned_cols=76 Identities=14% Similarity=0.237 Sum_probs=56.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.||+++|.|| ++|||+|....|.+.++.+++++ .+.++.|+.|. ..++++
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 69 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDE----------------------------NQKIAD 69 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEcccc----------------------------CHHHHH
Confidence 5899999999 99999999999999999998864 47777776642 234666
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.|++ .+ .|+++++ ++|++.....|..
T Consensus 70 ~~~i--------~~---~Pt~~~~-~~g~~~~~~~g~~ 95 (109)
T 3tco_A 70 KYSV--------LN---IPTTLIF-VNGQLVDSLVGAV 95 (109)
T ss_dssp HTTC--------CS---SSEEEEE-ETTEEEEEEESCC
T ss_pred hcCc--------cc---CCEEEEE-cCCcEEEeeeccC
Confidence 7777 22 2345566 8888776555543
No 352
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.54 E-value=7.5e-08 Score=74.72 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=37.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++|+++|.|| ++||++|+...|.+.++.+++ .++.++.|+.|.
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~ 62 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQ 62 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHC--CCcEEEEEECcc
Confidence 5789999999 999999999999999999888 368888887653
No 353
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.54 E-value=3e-08 Score=80.78 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=58.5
Q ss_pred eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHHhhc
Q psy17178 82 YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYG 161 (384)
Q Consensus 82 ~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~yg 161 (384)
+++|+|| ++|||+|+..+|.+.++.++++ +.++.|+.++..... ..|...++++.||
T Consensus 33 ~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~-------------------~~d~~~~l~~~~~ 89 (135)
T 3emx_A 33 DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGER-------------------ELSAARLEMNKAG 89 (135)
T ss_dssp SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHH-------------------HHHHHHHHHHHHT
T ss_pred cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhh-------------------hhhhhHHHHHHcC
Confidence 8999999 9999999999999999988764 888889886532211 1123366788999
Q ss_pred CcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 162 VYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 162 v~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
| .+++ ++++.++|++.....|..
T Consensus 90 v--------~~~P----t~~~~~~G~~v~~~~G~~ 112 (135)
T 3emx_A 90 V--------EGTP----TLVFYKEGRIVDKLVGAT 112 (135)
T ss_dssp C--------CSSS----EEEEEETTEEEEEEESCC
T ss_pred C--------ceeC----eEEEEcCCEEEEEEeCCC
Confidence 8 3333 345555999887766654
No 354
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.54 E-value=7.3e-08 Score=74.25 Aligned_cols=46 Identities=22% Similarity=0.210 Sum_probs=39.0
Q ss_pred ccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 75 LSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+++.+||+++|.|| ++|||+|+...|.+.++.++++ ++.++.|+.|
T Consensus 15 l~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~ 60 (105)
T 3m9j_A 15 LDAAGDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVD 60 (105)
T ss_dssp HHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETT
T ss_pred HHhcCCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhh
Confidence 34446899999999 9999999999999999998884 4888888765
No 355
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.53 E-value=1.3e-07 Score=74.09 Aligned_cols=43 Identities=9% Similarity=0.257 Sum_probs=37.9
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
+||+++|.|| +.||++|+...|.+.++.++++ ++.++.|+.|.
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~ 67 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE 67 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC
Confidence 6789999999 9999999999999999998874 58888887653
No 356
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.53 E-value=8e-08 Score=73.56 Aligned_cols=74 Identities=16% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
++|+++|.|| ++|||+|+...|.+.++.+++++ +.++.|+.|. ..++++
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~----------------------------~~~~~~ 63 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE----------------------------NPDIAA 63 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT----------------------------CHHHHH
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999988754 8888887653 134677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.|++ .+ .|+++++ ++|++.....|.
T Consensus 64 ~~~v--------~~---~Pt~~~~-~~g~~~~~~~g~ 88 (104)
T 2e0q_A 64 RYGV--------MS---LPTVIFF-KDGEPVDEIIGA 88 (104)
T ss_dssp HTTC--------CS---SCEEEEE-ETTEEEEEEESC
T ss_pred hCCc--------cc---cCEEEEE-ECCeEhhhccCC
Confidence 7887 22 2445566 889876544443
No 357
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.53 E-value=1.4e-07 Score=94.16 Aligned_cols=77 Identities=1% Similarity=-0.057 Sum_probs=63.8
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh--CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
.||+++|+|| ++||++|+.+.|.++++++++++ .++.++.|+.|. |....+
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~--------------------------d~~~~l 81 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE--------------------------ETNSAV 81 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS--------------------------GGGHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc--------------------------cccHHH
Confidence 3689999999 99999999999999999999976 368888888763 223577
Q ss_pred HHHhCceecCCCceeeEEEEEeC---CceEEEEEe
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECY---KMVIVYWFE 378 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~---~G~i~~~~~ 378 (384)
.++||| ..+|+++++++ +|+++..+.
T Consensus 82 ~~~~~V------~~~PTl~~f~~g~~~G~~~~~~~ 110 (519)
T 3t58_A 82 CREFNI------AGFPTVRFFQAFTKNGSGATLPG 110 (519)
T ss_dssp HHHTTC------CSBSEEEEECTTCCSCCCEEECC
T ss_pred HHHcCC------cccCEEEEEcCcccCCCceeEec
Confidence 889999 78999999997 777666444
No 358
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.2e-07 Score=76.33 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh---CCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcch
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHK 155 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~---~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 155 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++ .++.++.|+.+. ..+
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~ 74 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV----------------------------NQV 74 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT----------------------------CCH
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC----------------------------CHH
Confidence 4689999999 99999999999999999999873 457777776542 246
Q ss_pred hHHhhcCcccCCCCcccceeEEEEEEEecCCCccc
Q psy17178 156 ISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNG 190 (384)
Q Consensus 156 ~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~ 190 (384)
+++.|++ ++ .|+++++++ |++..
T Consensus 75 l~~~~~v--------~~---~Pt~~~~~~-g~~~~ 97 (133)
T 1x5d_A 75 LASRYGI--------RG---FPTIKIFQK-GESPV 97 (133)
T ss_dssp HHHHHTC--------CS---SSEEEEEET-TEEEE
T ss_pred HHHhCCC--------Ce---eCeEEEEeC-CCceE
Confidence 7888888 22 346678887 76543
No 359
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=9.7e-08 Score=76.46 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=37.4
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+.++|.|| ++||++|+...|.+.++.+++++.++.++.|+.|
T Consensus 22 ~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~ 64 (126)
T 1x5e_A 22 EGDWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT 64 (126)
T ss_dssp SSEEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT
T ss_pred CCCEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc
Confidence 345899999 9999999999999999999987767888888765
No 360
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.52 E-value=3.1e-07 Score=71.70 Aligned_cols=77 Identities=14% Similarity=0.068 Sum_probs=60.0
Q ss_pred CCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHH
Q psy17178 270 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLD 349 (384)
Q Consensus 270 Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 349 (384)
+++++|+|+ ++||++|....|.++++.++ .++.++-|.+|....+ ...++..
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~------------------------Sn~IA~~ 75 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDL------------------------SDYIAKK 75 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHH------------------------HHHHHHH
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchh------------------------hHHHHHH
Confidence 789999998 99999999999999999873 4577888877632211 2457888
Q ss_pred hCceecCCCce-eeEEEEEeCCceEEEEEecCC
Q psy17178 350 YGVYLSDQGHT-LDKYCLECYKMVIVYWFERGN 381 (384)
Q Consensus 350 ~gv~~~~~~~~-~p~~~lId~~G~i~~~~~~~~ 381 (384)
||| .+ .|+.+++ ++|++++....++
T Consensus 76 ~~V------~h~sPq~il~-k~G~~v~~~SH~~ 101 (112)
T 3iv4_A 76 TNV------KHESPQAFYF-VNGEMVWNRDHGD 101 (112)
T ss_dssp HTC------CCCSSEEEEE-ETTEEEEEEEGGG
T ss_pred hCC------ccCCCeEEEE-ECCEEEEEeeccc
Confidence 999 65 7888888 6999999766554
No 361
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.52 E-value=8.5e-08 Score=78.16 Aligned_cols=70 Identities=19% Similarity=0.099 Sum_probs=55.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+||++||+|| ++||++|....|.|+++.+++ .++.++.|+.|.. . +
T Consensus 29 ~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~-----------------~--------------~ 74 (135)
T 2dbc_A 29 KDLWVVIHLY-RSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC-----------------I--------------E 74 (135)
T ss_dssp SSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS-----------------C--------------S
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC-----------------c--------------c
Confidence 4589999999 999999999999999999887 3578888876631 0 2
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
.|++ ..+|++++++ +|+++..+..
T Consensus 75 ~~~i------~~~Pt~~~~~-~G~~v~~~~G 98 (135)
T 2dbc_A 75 HYHD------NCLPTIFVYK-NGQIEGKFIG 98 (135)
T ss_dssp SCCS------SCCSEEEEES-SSSCSEEEES
T ss_pred cCCC------CCCCEEEEEE-CCEEEEEEEe
Confidence 5777 6788887775 9998886653
No 362
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.90 E-value=1.3e-08 Score=78.44 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=56.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+++|.|| ++|||.|....|.++++.+++++ ++.++.|+.|.. ..+.+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~----------------------------~~~~~ 67 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN----------------------------PNTAA 67 (106)
Confidence 5789999999 99999999999999999988864 467776665421 23456
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.||+ ...|+++++ ++|+++..+.
T Consensus 68 ~~~v------~~~Pt~~~~-~~g~~~~~~~ 90 (106)
T 2yj7_A 68 QYGI------RSIPTLLLF-KNGQVVDRLV 90 (106)
Confidence 6777 567888888 7888877554
No 363
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.51 E-value=1.9e-07 Score=68.97 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=36.0
Q ss_pred CeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 271 KYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 271 k~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
.++++.|| ++|||.|....|.++++.++++ .++.++.|+.|
T Consensus 3 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~ 43 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVM 43 (85)
T ss_dssp CEEEEEEE-CCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESS
T ss_pred ceEEEEEe-CCCCCchHHHHHHHHHHHHHcC-CceEEEEEECC
Confidence 46789999 9999999999999999998875 46889888886
No 364
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.50 E-value=1.1e-07 Score=75.19 Aligned_cols=79 Identities=9% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.|++++|+|| ++|||+|+...|.+.++.++++ ..+..++.+..... |...++++
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~----------------------~~~~~~~~ 81 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQL----------------------NDLQAFRS 81 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGH----------------------HHHHHHHH
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcH----------------------HHHHHHHH
Confidence 4789999999 9999999999999999988764 44566766642211 11235677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.||+ +++ |+++++ ++|++.....|.
T Consensus 82 ~~~i--------~~~---Pt~~~~-~~G~~~~~~~G~ 106 (118)
T 1zma_A 82 RYGI--------PTV---PGFVHI-TDGQINVRCDSS 106 (118)
T ss_dssp HHTC--------CSS---CEEEEE-ETTEEEEECCTT
T ss_pred HcCC--------CCC---CeEEEE-ECCEEEEEecCC
Confidence 8888 333 345555 588876555543
No 365
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.50 E-value=1.2e-07 Score=74.69 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=37.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.||+++|.|| ++|||+|+...|.+.++.++++ ++.++.|+.|
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~ 68 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD 68 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc
Confidence 4899999999 9999999999999999998875 6888888765
No 366
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.49 E-value=1.3e-07 Score=76.04 Aligned_cols=73 Identities=18% Similarity=0.131 Sum_probs=55.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
++|+++|.|| ++||++|+...|.|.++.+++ .++.++.|+.|. ..++++
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~----------------------------~~~l~~ 84 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADN----------------------------NSEIVS 84 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTT----------------------------CHHHHH
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCC----------------------------CHHHHH
Confidence 6789999999 999999999999999999888 368888887753 134677
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
.|++ .+++ + +++.++|++.....|
T Consensus 85 ~~~v--------~~~P---t-~~i~~~G~~~~~~~G 108 (125)
T 1r26_A 85 KCRV--------LQLP---T-FIIARSGKMLGHVIG 108 (125)
T ss_dssp HTTC--------CSSS---E-EEEEETTEEEEEEES
T ss_pred HcCC--------Cccc---E-EEEEeCCeEEEEEeC
Confidence 7887 3333 3 445589988655555
No 367
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.49 E-value=1.9e-08 Score=83.70 Aligned_cols=82 Identities=9% Similarity=-0.034 Sum_probs=54.6
Q ss_pred eeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecC
Q psy17178 263 IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDL 342 (384)
Q Consensus 263 ~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 342 (384)
+..+...||+++|+|| |+||++|+...|.+.+..+-.+..+..++.|.+|.. .. .
T Consensus 37 l~~A~~~~KpVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e--------~~-------~--------- 91 (151)
T 3ph9_A 37 LFYAQKSKKPLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHE--------TT-------D--------- 91 (151)
T ss_dssp HHHHHHHTCCEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSC--------CS-------C---------
T ss_pred HHHHHHcCCcEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCC--------ch-------h---------
Confidence 4444457999999999 999999999999888752211111124566666621 00 1
Q ss_pred chHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 343 THKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 343 ~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
....|++ ..+|+++++|++|+++....
T Consensus 92 ---~~~~~~v------~~~PT~~f~~~~G~~v~~~~ 118 (151)
T 3ph9_A 92 ---KNLSPDG------QYVPRIMFVDPSLTVRADIA 118 (151)
T ss_dssp ---GGGCTTC------CCSSEEEEECTTSCBCTTCC
T ss_pred ---hHhhcCC------CCCCEEEEECCCCCEEEEEe
Confidence 1224555 57899999999999987544
No 368
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.48 E-value=3.4e-07 Score=73.85 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=41.0
Q ss_pred ccceEEcccc-CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhC-CcEEEEEeCC
Q psy17178 69 QLKEIKLSDY-YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-NTEVVAASVD 123 (384)
Q Consensus 69 ~g~~~~l~~~-~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~-~v~vi~Vs~d 123 (384)
+++.+...-. .+|+++|.|| ++||++|+...|.|.++.++++.. ++.++.|..+
T Consensus 13 ~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 13 VGKTFDAIVMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp CTTTCCCCCTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred cCCCHHHHhccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 4444443322 4889999999 999999999999999999999753 5666666554
No 369
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.48 E-value=2.7e-07 Score=82.99 Aligned_cols=68 Identities=7% Similarity=0.057 Sum_probs=56.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh--CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
.+|+++|+|| ++||++|+...|.++++++++++ .++.++.|+.+. |.+..+
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~--------------------------~~~~~l 81 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE--------------------------ETNSAV 81 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS--------------------------TTTHHH
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc--------------------------hhhHHH
Confidence 4589999999 99999999999999999999976 468888888653 123567
Q ss_pred HHHhCceecCCCceeeEEEEEeC
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECY 369 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~ 369 (384)
.+.|++ ..+|+++++++
T Consensus 82 ~~~~~v------~~~Pt~~~~~~ 98 (244)
T 3q6o_A 82 CRDFNI------PGFPTVRFFXA 98 (244)
T ss_dssp HHHTTC------CSSSEEEEECT
T ss_pred HHHcCC------CccCEEEEEeC
Confidence 788888 68899999986
No 370
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.48 E-value=5.7e-08 Score=85.42 Aligned_cols=92 Identities=12% Similarity=0.099 Sum_probs=64.1
Q ss_pred CccEEEeeecCccceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccc
Q psy17178 58 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRK 137 (384)
Q Consensus 58 P~f~l~~~~~~~g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~ 137 (384)
++..+.++ +++.+......|++++|.|| ++||++|+...|.+.++.+++++ .+.++.|+.|..
T Consensus 95 ~~~~v~~l---~~~~f~~~~~~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~------------ 157 (210)
T 3apq_A 95 DDPEIITL---ERREFDAAVNSGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD------------ 157 (210)
T ss_dssp TCTTSEEC---CHHHHHHHHHHSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC------------
T ss_pred CCCceEEe---cHHHHHHHHccCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc------------
Confidence 34444444 45544444457899999999 99999999999999999998854 478888775431
Q ss_pred cCCCCccceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccce
Q psy17178 138 EGGLGKLKIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGG 194 (384)
Q Consensus 138 ~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g 194 (384)
.++++.||| .++ |+++++ ++|++.....|
T Consensus 158 ----------------~~l~~~~~v--------~~~---Pt~~~~-~~G~~~~~~~G 186 (210)
T 3apq_A 158 ----------------RMLCRMKGV--------NSY---PSLFIF-RSGMAAVKYNG 186 (210)
T ss_dssp ----------------HHHHHHTTC--------CSS---SEEEEE-CTTSCCEECCS
T ss_pred ----------------HHHHHHcCC--------CcC---CeEEEE-ECCCceeEecC
Confidence 246677887 333 345555 99988655555
No 371
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.47 E-value=9.9e-08 Score=74.54 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=37.3
Q ss_pred cCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 78 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 78 ~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
..||+++|.|| ++|||+|....|.++++.+++. ++.++.|+.|
T Consensus 24 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 66 (113)
T 1ti3_A 24 GSQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD 66 (113)
T ss_dssp TSSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred hcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc
Confidence 35899999999 9999999999999999988874 6888888765
No 372
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.47 E-value=1.8e-07 Score=69.04 Aligned_cols=63 Identities=16% Similarity=0.295 Sum_probs=49.8
Q ss_pred eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhC
Q psy17178 272 YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYG 351 (384)
Q Consensus 272 ~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 351 (384)
++++.|| ++|||+|....|.++++.+++++ ++.++.|+.|.. ..+.+.||
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~~~~ 52 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD----------------------------REKAIEYG 52 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC----------------------------GGGGGGTC
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC----------------------------HHHHHhCC
Confidence 4578899 99999999999999999998863 588888887621 23456788
Q ss_pred ceecCCCceeeEEEEEeCCceE
Q psy17178 352 VYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 352 v~~~~~~~~~p~~~lId~~G~i 373 (384)
+ ..+|++++ +|++
T Consensus 53 v------~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 53 L------MAVPAIAI---NGVV 65 (85)
T ss_dssp S------SCSSEEEE---TTTE
T ss_pred c------eeeCEEEE---CCEE
Confidence 8 67888777 7887
No 373
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.47 E-value=1.6e-08 Score=81.41 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=57.4
Q ss_pred eccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCc
Q psy17178 264 KLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLT 343 (384)
Q Consensus 264 ~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 343 (384)
..+...||+++|+|| ++||+.|....|.++++.++++ ++.++.|+.|. .
T Consensus 30 ~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~----------------------------~ 78 (130)
T 1wmj_A 30 TKAKEAGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE----------------------------L 78 (130)
T ss_dssp HHHHTTTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT----------------------------S
T ss_pred HHHhhcCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc----------------------------h
Confidence 333346899999999 9999999999999999998875 67777777652 1
Q ss_pred hHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 344 HKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 344 ~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..+.+.|++ ..+|+++++ ++|+++..+.
T Consensus 79 ~~~~~~~~v------~~~Pt~~~~-~~g~~~~~~~ 106 (130)
T 1wmj_A 79 KEVAEKYNV------EAMPTFLFI-KDGAEADKVV 106 (130)
T ss_dssp GGGHHHHTC------CSSCCCCBC-TTTTCCBCCC
T ss_pred HHHHHHcCC------CccceEEEE-eCCeEEEEEe
Confidence 345677887 567765444 7888776444
No 374
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.46 E-value=2e-07 Score=72.08 Aligned_cols=44 Identities=14% Similarity=0.223 Sum_probs=37.9
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+|+++|.|| ++|||+|+...|.+.++.+++.+ ++.++.|+.|.
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 60 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE 60 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC
Confidence 4789999999 99999999999999999998864 58888887653
No 375
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.46 E-value=8.3e-09 Score=80.63 Aligned_cols=75 Identities=8% Similarity=0.072 Sum_probs=54.1
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEE
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLL 339 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (384)
++.+++++..||++||+|| ++||++|+...|.++++.++++ .+-+..|..
T Consensus 2 ~~~~~la~~~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~------------------------ 51 (106)
T 3kp8_A 2 PLAVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNGP------------------------ 51 (106)
T ss_dssp HHHHHHHHHHHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCT------------------------
T ss_pred hHhhHHHHhcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEecccc------------------------
Confidence 3457788888999999999 9999999999999999886552 222221110
Q ss_pred ecCchHHHHHhCceecCCCceeeEEEEEeCCceE
Q psy17178 340 SDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 340 ~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.+....+.++||+ ..+|++++ +|+.
T Consensus 52 ~~~~~~l~~~~~V------~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 52 GTPQAQECTEAGI------TSYPTWII---NGRT 76 (106)
T ss_dssp TSCCCHHHHHTTC------CSSSEEEE---TTEE
T ss_pred cchhHHHHHHcCC------eEeCEEEE---CCEE
Confidence 0234678899999 68888555 7874
No 376
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.45 E-value=2.2e-07 Score=72.24 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=37.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+++++|.|| +.||++|+...|.+.++.+++.+ ++.++.|+.|
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~ 63 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVE 63 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECC
Confidence 4689999999 99999999999999999998864 5888888765
No 377
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.45 E-value=3.4e-07 Score=75.76 Aligned_cols=70 Identities=7% Similarity=0.029 Sum_probs=53.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+|+|||.|| |+||++|+...|.|.++.+++.+ .+.|+-|++|.. .+++.
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~----------------------------~e~a~ 89 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV----------------------------PDFNT 89 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC----------------------------CTTTT
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC----------------------------HHHHH
Confidence 4589999999 99999999999999999999854 377888888732 12355
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEE
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~ 375 (384)
.|++ ...|+.++. ++|+.+.
T Consensus 90 ~y~V------~siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 90 MYEL------YDPVSVMFF-YRNKHMM 109 (160)
T ss_dssp TTTC------CSSEEEEEE-ETTEEEE
T ss_pred HcCC------CCCCEEEEE-ECCEEEE
Confidence 6887 567776656 4677663
No 378
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.44 E-value=1.2e-07 Score=75.83 Aligned_cols=81 Identities=12% Similarity=0.221 Sum_probs=58.6
Q ss_pred ccccCCCeEEEEEeeCC-------CCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCcccee
Q psy17178 75 LSDYYGKYLVFFFYPLD-------FTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIP 147 (384)
Q Consensus 75 l~~~~gk~vvl~f~~~~-------~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p 147 (384)
+.+.+||+++|.|| ++ |||+|+...|.+.++.+++.+ ++.++.|+.+... .|.
T Consensus 19 ~~~~~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~~~--------------- 78 (123)
T 1wou_A 19 VEQHNGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKP---YWK--------------- 78 (123)
T ss_dssp HHTTTTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHH---HHH---------------
T ss_pred HHHhCCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCch---hhh---------------
Confidence 33445899999999 99 999999999999999887754 6889999887532 121
Q ss_pred EEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcc
Q psy17178 148 LLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVN 189 (384)
Q Consensus 148 ~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~ 189 (384)
|...++++.|++ +++ |++++++..+++.
T Consensus 79 ---d~~~~~~~~~~i--------~~~---Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 79 ---DPNNDFRKNLKV--------TAV---PTLLKYGTPQKLV 106 (123)
T ss_dssp ---CTTCHHHHHHCC--------CSS---SEEEETTSSCEEE
T ss_pred ---chhHHHHHHCCC--------Cee---CEEEEEcCCceEe
Confidence 345568888888 333 3556777644443
No 379
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.44 E-value=2e-07 Score=76.24 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=37.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++ ++.++.|+.|
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~ 65 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIA 65 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETT
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECC
Confidence 3789999999 99999999999999999999865 4888888754
No 380
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.43 E-value=1.6e-07 Score=84.47 Aligned_cols=71 Identities=10% Similarity=-0.019 Sum_probs=56.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+|++|||+|| ++||++|....|.|.+++++|. ++.|+.|+.+. . . +.+
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~--------~---------~------------l~~ 179 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN--------T---------G------------AGD 179 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH--------H---------C------------CTT
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc--------H---------H------------HHH
Confidence 4889999999 9999999999999999999885 58888887642 1 1 123
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.|++ ..+|+++++. +|+++..+.
T Consensus 180 ~~~I------~~~PTll~~~-~G~~v~~~v 202 (245)
T 1a0r_P 180 RFSS------DVLPTLLVYK-GGELLSNFI 202 (245)
T ss_dssp SSCT------TTCSEEEEEE-TTEEEEEET
T ss_pred HCCC------CCCCEEEEEE-CCEEEEEEe
Confidence 5677 6788877765 999988665
No 381
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.43 E-value=7.5e-08 Score=78.52 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=36.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCC--cEEEEEeC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASV 122 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~--v~vi~Vs~ 122 (384)
.+|+++|.|| ++||++|+...|.|.++.+++++.+ +.++.|..
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 77 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDA 77 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECT
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeC
Confidence 4789999999 9999999999999999999998764 56655543
No 382
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.43 E-value=2.8e-07 Score=70.82 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=55.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
.+|+++|.|| ++|||+|+...|.+.++.+++++ ++.++.|+.|. ..++++
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 66 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE----------------------------APGIAT 66 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc----------------------------hHHHHH
Confidence 4689999999 99999999999999999988864 47777777653 135667
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
.||+ .+++ + +++.++|++.....|..
T Consensus 67 ~~~v--------~~~P---t-~~~~~~g~~~~~~~G~~ 92 (105)
T 1fb6_A 67 QYNI--------RSIP---T-VLFFKNGERKESIIGAV 92 (105)
T ss_dssp HTTC--------CSSS---E-EEEEETTEEEEEEEECC
T ss_pred hCCC--------Cccc---E-EEEEeCCeEEEEEecCC
Confidence 7777 2333 3 34447898876555544
No 383
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.41 E-value=7.2e-07 Score=72.41 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=58.3
Q ss_pred CeEEEEEEeCCCC--cCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 271 KYLVFFFYPLDFT--FVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 271 k~vvl~F~~a~~c--~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+++||.|| ++|| ++|+...|.|.++.++|.+ .++++-|++|. +..++.
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe----------------------------~~~la~ 83 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEA----------------------------ERGLMA 83 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGG----------------------------HHHHHH
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCC----------------------------CHHHHH
Confidence 49999999 9999 9999999999999998853 47777776663 245678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+||| ...|+.++. +||+++....
T Consensus 84 ~ygV------~siPTlilF-kdG~~v~~~v 106 (137)
T 2qsi_A 84 RFGV------AVCPSLAVV-QPERTLGVIA 106 (137)
T ss_dssp HHTC------CSSSEEEEE-ECCEEEEEEE
T ss_pred HcCC------ccCCEEEEE-ECCEEEEEEe
Confidence 8999 788988877 6999998765
No 384
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.39 E-value=3.3e-07 Score=74.69 Aligned_cols=74 Identities=14% Similarity=0.049 Sum_probs=58.4
Q ss_pred CCCeEEEEEEeCCC--CcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 269 YGKYLVFFFYPLDF--TFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~--c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
.++++||+|| +.| |++|+...|.|.++.++|.++.+.|+-|++|. +..+
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe----------------------------~~~l 83 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ----------------------------SEAI 83 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH----------------------------HHHH
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC----------------------------CHHH
Confidence 4567888888 887 99999999999999998864437776666552 2456
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+.+||| ..+|+.++. ++|+++....
T Consensus 84 A~~ygV------~sIPTlilF-k~G~~v~~~~ 108 (140)
T 2qgv_A 84 GDRFGA------FRFPATLVF-TGGNYRGVLN 108 (140)
T ss_dssp HHHHTC------CSSSEEEEE-ETTEEEEEEE
T ss_pred HHHcCC------ccCCEEEEE-ECCEEEEEEe
Confidence 788999 788987777 6999998665
No 385
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.38 E-value=1e-06 Score=63.75 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=47.4
Q ss_pred EEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCc
Q psy17178 273 LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGV 352 (384)
Q Consensus 273 vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 352 (384)
+.|+|| ++||++|+...|.++++.++++. ++.++.|+ +..+.++||+
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~-------------------------------~~~~~~~~~v 48 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK-------------------------------EMDQILEAGL 48 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC-------------------------------SHHHHHHHTC
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec-------------------------------CHHHHHHCCC
Confidence 358899 88999999999999999887752 45555543 2356778998
Q ss_pred eecCCCceeeEEEEEeCCceEEEE
Q psy17178 353 YLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 353 ~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
..+|++++ +|+++..
T Consensus 49 ------~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 49 ------TALPGLAV---DGELKIM 63 (77)
T ss_dssp ------SSSSCEEE---TTEEEEC
T ss_pred ------CcCCEEEE---CCEEEEc
Confidence 67888777 8998763
No 386
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.37 E-value=8.8e-07 Score=82.23 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=57.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+++++|+|| ++||++|+...|.++++.+++++. +.++.|+.|.. .+..+.+
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~--------------------------~~~~l~~ 85 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLN--------------------------KNKALCA 85 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTST--------------------------TTHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCc--------------------------cCHHHHH
Confidence 4789999999 999999999999999999998654 88999988732 1356778
Q ss_pred HhCceecCCCceeeEEEEEeCCce
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMV 372 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~ 372 (384)
.||+ ..+|+++++++ |+
T Consensus 86 ~~~I------~~~Pt~~~~~~-g~ 102 (298)
T 3ed3_A 86 KYDV------NGFPTLMVFRP-PK 102 (298)
T ss_dssp HTTC------CBSSEEEEEEC-CC
T ss_pred hCCC------CccceEEEEEC-Cc
Confidence 8998 68899888875 44
No 387
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.37 E-value=3.3e-07 Score=81.22 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=38.6
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+|+++|+|| ++||++|+...|.+.++.+++++ .+.++.|+.|.
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~ 72 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ 72 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCC
Confidence 4789999999 99999999999999999999875 38888887753
No 388
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.36 E-value=5.1e-07 Score=71.36 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=37.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+|+++|.|| ++|||+|+...|.+.++.++++. ++.++.|+.|.
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 72 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT 72 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC
Confidence 4789999999 99999999999999999988864 58888887653
No 389
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.70 E-value=5.3e-08 Score=74.88 Aligned_cols=43 Identities=19% Similarity=0.267 Sum_probs=35.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+|+++|.|| ++|||.|....|.+.++.+++++ ++.++.|+.|
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~ 60 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVD 60 (106)
Confidence 4689999999 99999999999999999888764 4666666554
No 390
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.33 E-value=6e-07 Score=71.01 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=42.2
Q ss_pred ccceEEcc-ccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh----CCcEEEEEeCC
Q psy17178 69 QLKEIKLS-DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ----INTEVVAASVD 123 (384)
Q Consensus 69 ~g~~~~l~-~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~----~~v~vi~Vs~d 123 (384)
+++.+... .-++|+++|.|| ++||++|+...|.+.++.+++++ .++.++.|..+
T Consensus 13 ~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 13 VAKNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cccCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 44444433 236789999999 99999999999999999999975 26777777665
No 391
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.33 E-value=2.4e-07 Score=72.86 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=34.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhC--CcEEEEEeC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI--NTEVVAASV 122 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~--~v~vi~Vs~ 122 (384)
++|+++|.|| ++|||+|+...|.+.++.+++++. ++.++.|..
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 67 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDA 67 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEET
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcC
Confidence 5789999999 999999999999999999888754 344444443
No 392
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.32 E-value=5.5e-07 Score=72.00 Aligned_cols=76 Identities=17% Similarity=0.343 Sum_probs=52.4
Q ss_pred CCCeEEEEEeeCCCCC--------------CchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCcc
Q psy17178 79 YGKYLVFFFYPLDFTF--------------VCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKL 144 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp--------------~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~ 144 (384)
.||+++|.|| ++||+ +|+...|.+.++.+++++ ++.++.|+.|.
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~-------------------- 77 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ-------------------- 77 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS--------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCC--------------------
Confidence 5789999999 99999 999999999999988864 47888887653
Q ss_pred ceeEEeeCcchhHHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 145 KIPLLSDLTHKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 145 ~~p~l~D~~~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..++++.||+ ++ .|+++++ ++|++.....|..
T Consensus 78 --------~~~l~~~~~v--------~~---~Pt~~~~-~~G~~~~~~~G~~ 109 (123)
T 1oaz_A 78 --------NPGTAPKYGI--------RG---IPTLLLF-KNGEVAATKVGAL 109 (123)
T ss_dssp --------CTTTGGGGTC--------CB---SSEEEEE-ESSSEEEEEESCC
T ss_pred --------CHHHHHHcCC--------Cc---cCEEEEE-ECCEEEEEEeCCC
Confidence 1246677887 33 2455667 8999876555543
No 393
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.32 E-value=3e-07 Score=75.71 Aligned_cols=71 Identities=14% Similarity=0.067 Sum_probs=48.3
Q ss_pred CeEEEEEEeCCC--CcCchHhHHHHHHHHHHHHhCCcE--EEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHH
Q psy17178 271 KYLVFFFYPLDF--TFVCPTEILAFNDRLEEFHQINTE--VVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 346 (384)
Q Consensus 271 k~vvl~F~~a~~--c~~C~~~~~~l~~l~~~~~~~~v~--vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 346 (384)
+.+||+|| ++| |++|+...|.|+++.++| .++. ++.|+.|. ...+
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~----------------------------~~~l 83 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQ----------------------------SEAI 83 (142)
T ss_dssp CSEEEEEC-CCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHH----------------------------HHHH
T ss_pred CCEEEEEE-CCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCC----------------------------CHHH
Confidence 44677787 666 999999999999999988 3577 77777652 1346
Q ss_pred HHHhCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 347 SLDYGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 347 ~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
+++||+ ..+|+++++ ++|+++..+.+
T Consensus 84 a~~~~V------~~iPT~~~f-k~G~~v~~~~G 109 (142)
T 2es7_A 84 GDRFNV------RRFPATLVF-TDGKLRGALSG 109 (142)
T ss_dssp HHTTTC------CSSSEEEEE-SCC----CEES
T ss_pred HHhcCC------CcCCeEEEE-eCCEEEEEEeC
Confidence 778999 789999999 89999886653
No 394
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.30 E-value=7.4e-07 Score=73.23 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=38.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.||+++|+|| ++||++|+...|.|.++.+++++ ++.++.|+.|.
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~ 65 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITE 65 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEcccc
Confidence 4789999999 99999999999999999999854 58888888763
No 395
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.30 E-value=3.9e-07 Score=70.74 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=35.3
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhC--CcEEEEEeCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI--NTEVVAASVD 123 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~--~v~vi~Vs~d 123 (384)
+++++|.|| ++||++|+...|.+.++.+++.+. ++.++.|+.|
T Consensus 21 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 65 (111)
T 3uvt_A 21 EGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT 65 (111)
T ss_dssp SSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT
T ss_pred CCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc
Confidence 789999999 999999999999999998876533 5666666654
No 396
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.29 E-value=2.5e-07 Score=76.88 Aligned_cols=83 Identities=11% Similarity=0.010 Sum_probs=52.4
Q ss_pred EccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCc
Q psy17178 74 KLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLT 153 (384)
Q Consensus 74 ~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~ 153 (384)
..+...||+|+|+|| ++||++|+...|.+.+..+-.+..+..++.|.+|.. .. .
T Consensus 38 ~~A~~~~KpVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e------~~---------~---------- 91 (151)
T 3ph9_A 38 FYAQKSKKPLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHE------TT---------D---------- 91 (151)
T ss_dssp HHHHHHTCCEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSC------CS---------C----------
T ss_pred HHHHHcCCcEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCC------ch---------h----------
Confidence 334446899999999 999999999999887652211111123455555520 00 1
Q ss_pred chhHHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 154 HKISLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 154 ~~~~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
.+..|++ . ..|+++++|++|++.....|.
T Consensus 92 --~~~~~~v--------~---~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 92 --KNLSPDG--------Q---YVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp --GGGCTTC--------C---CSSEEEEECTTSCBCTTCCCS
T ss_pred --hHhhcCC--------C---CCCEEEEECCCCCEEEEEeCC
Confidence 1223444 2 235678999999998877775
No 397
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.29 E-value=1.3e-06 Score=69.86 Aligned_cols=44 Identities=9% Similarity=0.113 Sum_probs=35.6
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh----CCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ----INTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~----~~v~vi~Vs~d 123 (384)
.+|+++|.|| ++||++|+...|.+.++.+++.. .++.++.|..|
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~ 79 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE 79 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc
Confidence 3789999999 99999999999999999988863 23556556544
No 398
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.25 E-value=1.4e-07 Score=75.68 Aligned_cols=43 Identities=19% Similarity=0.253 Sum_probs=36.5
Q ss_pred cCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 78 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 78 ~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
..||+++|.|| ++|||+|+...|.|.++.+++. ++.++.|+.|
T Consensus 34 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 76 (130)
T 1wmj_A 34 EAGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVD 76 (130)
T ss_dssp TTTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTT
T ss_pred hcCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEecc
Confidence 46899999999 9999999999999999998875 5777776654
No 399
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.24 E-value=1.2e-06 Score=71.44 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=36.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.++.++|.|| ++|||+|....|.+.++.+++.+ ++.++.|+.|.
T Consensus 49 ~~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~ 92 (140)
T 1v98_A 49 GAPLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE 92 (140)
T ss_dssp CCCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred cCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC
Confidence 3434889999 99999999999999999998864 58888887653
No 400
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.22 E-value=4.2e-06 Score=79.31 Aligned_cols=72 Identities=7% Similarity=0.025 Sum_probs=55.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHH-------HHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEec
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILA-------FNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSD 341 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~-------l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D 341 (384)
++++++|+|| |+||+ |+..+|. ++++.+++++.++.++.|+.|.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~--------------------------- 77 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK--------------------------- 77 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT---------------------------
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC---------------------------
Confidence 4789999999 99999 9888898 7777777766678888777653
Q ss_pred CchHHHHHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 342 LTHKISLDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 342 ~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+..+.++||+ ..+|+++++ ++|++. .|.
T Consensus 78 -~~~l~~~~~v------~~~Pt~~~~-~~g~~~-~~~ 105 (350)
T 1sji_A 78 -EAKLAKKLGF------DEEGSLYVL-KGDRTI-EFD 105 (350)
T ss_dssp -THHHHHHHTC------CSTTEEEEE-ETTEEE-EEC
T ss_pred -CHHHHHhcCC------CccceEEEE-ECCcEE-Eec
Confidence 2356788998 678998888 578843 344
No 401
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.21 E-value=2e-06 Score=68.09 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=38.5
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++ ++.++.|+.+.
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~ 63 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA 63 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC
Confidence 4689999999 99999999999999999998865 68888887764
No 402
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.21 E-value=2.5e-06 Score=67.75 Aligned_cols=69 Identities=17% Similarity=0.123 Sum_probs=54.7
Q ss_pred CCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHH
Q psy17178 270 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLD 349 (384)
Q Consensus 270 Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 349 (384)
++++||+|| ++||++|+...|.|+++.+++. ++.++-|++|.. +++
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~-------------------------------~~~ 68 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSC-------------------------------IQH 68 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGT-------------------------------STT
T ss_pred CCeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHh-------------------------------HHH
Confidence 459999999 9999999999999999999884 588888887631 134
Q ss_pred hCceecCCCceeeEEEEEeCCceEEEEEec
Q psy17178 350 YGVYLSDQGHTLDKYCLECYKMVIVYWFER 379 (384)
Q Consensus 350 ~gv~~~~~~~~~p~~~lId~~G~i~~~~~~ 379 (384)
|++ ...|+.++. ++|+.+..+..
T Consensus 69 ~~v------~~~PT~~~f-k~G~~v~~~~G 91 (118)
T 3evi_A 69 YHD------NCLPTIFVY-KNGQIEAKFIG 91 (118)
T ss_dssp CCG------GGCSEEEEE-ETTEEEEEEES
T ss_pred CCC------CCCCEEEEE-ECCEEEEEEeC
Confidence 677 678876666 58999887663
No 403
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.21 E-value=1.2e-06 Score=71.26 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=36.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
+||++||+|| ++||++|+...|.|.++.+++. ++.++.|+.+.
T Consensus 29 ~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~ 71 (135)
T 2dbc_A 29 KDLWVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS 71 (135)
T ss_dssp SSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc
Confidence 4689999999 9999999999999999998873 57777776553
No 404
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.21 E-value=7.9e-07 Score=88.02 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhC-CcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-NTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 347 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 347 (384)
.||+++|+|| ++||++|+.+.|.++++.+++++. ++.++.|..+.. .+.
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-----------------------------~~~ 418 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-----------------------------DVP 418 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-----------------------------CCC
T ss_pred CCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-----------------------------hhH
Confidence 4899999999 999999999999999999999764 677777766531 112
Q ss_pred HHhCceecCCCceeeEEEEEeCCceE
Q psy17178 348 LDYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 348 ~~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
+.|++ ..+|++++++++|++
T Consensus 419 ~~~~v------~~~Pt~~~~~~~~~~ 438 (481)
T 3f8u_A 419 SPYEV------RGFPTIYFSPANKKL 438 (481)
T ss_dssp TTCCC------CSSSEEEEECTTCTT
T ss_pred hhCCC------cccCEEEEEeCCCeE
Confidence 45677 578888888877764
No 405
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.20 E-value=6e-06 Score=79.27 Aligned_cols=72 Identities=11% Similarity=0.114 Sum_probs=57.4
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-----CCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCc
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-----INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLT 343 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 343 (384)
.+++++|.|| ++||++|....|.++++.+++++ .++.++.|+.+ .+
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~----------------------------~~ 71 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD----------------------------QH 71 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT----------------------------TC
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC----------------------------cc
Confidence 5789999999 99999999999999999999853 23677777644 23
Q ss_pred hHHHHHhCceecCCCceeeEEEEEeCCceEEEE
Q psy17178 344 HKISLDYGVYLSDQGHTLDKYCLECYKMVIVYW 376 (384)
Q Consensus 344 ~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~~~ 376 (384)
..+.+.||+ ..+|+++++ ++|+++.+
T Consensus 72 ~~l~~~~~v------~~~Pt~~~f-~~G~~~~~ 97 (382)
T 2r2j_A 72 SDIAQRYRI------SKYPTLKLF-RNGMMMKR 97 (382)
T ss_dssp HHHHHHTTC------CEESEEEEE-ETTEEEEE
T ss_pred HHHHHhcCC------CcCCEEEEE-eCCcEeee
Confidence 567788998 688987766 58888764
No 406
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.19 E-value=7.8e-07 Score=86.96 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=54.1
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhC-------CcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEec
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-------NTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSD 341 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~-------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D 341 (384)
.+|++||+|| ++||++|+.+.|.++++++++++. .+.++.|+.|.
T Consensus 41 ~~k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~--------------------------- 92 (470)
T 3qcp_A 41 PLCPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS--------------------------- 92 (470)
T ss_dssp GGSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT---------------------------
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC---------------------------
Confidence 4589999999 999999999999999999988643 27788887653
Q ss_pred CchHHHHHhCceecCCCceeeEEEEEeCCce
Q psy17178 342 LTHKISLDYGVYLSDQGHTLDKYCLECYKMV 372 (384)
Q Consensus 342 ~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~ 372 (384)
...+.++|+| ..+|+++++++.|.
T Consensus 93 -~~~la~~y~V------~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 93 -EVDLCRKYDI------NFVPRLFFFYPRDS 116 (470)
T ss_dssp -CHHHHHHTTC------CSSCEEEEEEESSC
T ss_pred -CHHHHHHcCC------CccCeEEEEECCCc
Confidence 1356677887 67888888866553
No 407
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.17 E-value=1.7e-06 Score=63.70 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=34.1
Q ss_pred eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 82 YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 82 ~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+++.|| ++|||+|+...|.+.++.+++.+ ++.++.|+.|
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 42 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIM 42 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTT
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 3578899 99999999999999999988863 6888888775
No 408
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.17 E-value=1.7e-06 Score=63.61 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=35.8
Q ss_pred CeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 81 KYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 81 k~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.++++.|| ++|||+|+...|.+.++.+++. .++.++.|+.|.
T Consensus 3 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~ 44 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVME 44 (85)
T ss_dssp CEEEEEEE-CCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSS
T ss_pred ceEEEEEe-CCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCC
Confidence 46788999 9999999999999999988875 368888888763
No 409
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.16 E-value=2e-06 Score=75.90 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=56.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
+|+++||+|| ++||++|....|.+.++.++|. ++.++.|+.+ . .. +.+
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~-------~~---------------------l~~ 166 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N-------TG---------------------AGD 166 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H-------HT---------------------CST
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c-------HH---------------------HHH
Confidence 4689999999 9999999999999999998883 6888888765 1 11 123
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
.|++ ..+|+++++. +|+++..+.
T Consensus 167 ~~~i------~~~PTl~~~~-~G~~v~~~~ 189 (217)
T 2trc_P 167 RFSS------DVLPTLLVYK-GGELISNFI 189 (217)
T ss_dssp TSCG------GGCSEEEEEE-TTEEEEEET
T ss_pred HCCC------CCCCEEEEEE-CCEEEEEEe
Confidence 5677 6789888885 999987665
No 410
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.13 E-value=1.5e-06 Score=73.81 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=38.8
Q ss_pred ceeeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEe
Q psy17178 260 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS 311 (384)
Q Consensus 260 g~~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is 311 (384)
+....+.+..+|++|+.|| ..|||.|....|.|.++.+++++ +.++.+.
T Consensus 12 ~~~~~~G~~~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TTSCEEECTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCcCCCCCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 4445666778999999999 99999999999999999987653 5555443
No 411
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.13 E-value=9.7e-08 Score=74.48 Aligned_cols=39 Identities=8% Similarity=0.073 Sum_probs=34.2
Q ss_pred ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHH
Q psy17178 71 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEF 110 (384)
Q Consensus 71 ~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~ 110 (384)
+.++|++++||++||.|| ++|||+|+...|.|.++.+++
T Consensus 3 ~~~~la~~~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHHHHHHHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred HhhHHHHhcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhC
Confidence 456788888999999999 999999999999999887655
No 412
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.10 E-value=3.4e-06 Score=78.22 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=38.2
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.+++++|+|| ++||++|+..+|.+.++.+++++ .+.++.|+.|
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d 76 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCD 76 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEcc
Confidence 4689999999 99999999999999999999865 3888888887
No 413
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.08 E-value=7.9e-06 Score=72.09 Aligned_cols=42 Identities=10% Similarity=-0.051 Sum_probs=34.4
Q ss_pred CeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh---CCcEEEEEeCC
Q psy17178 81 KYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVD 123 (384)
Q Consensus 81 k~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~---~~v~vi~Vs~d 123 (384)
+.++|.|| ++|||+|+...|.+.++.+++.+ .++.++.|+.|
T Consensus 135 ~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~ 179 (226)
T 1a8l_A 135 DVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 179 (226)
T ss_dssp CEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG
T ss_pred CcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc
Confidence 34499999 99999999999999999999874 36777766544
No 414
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.02 E-value=8e-06 Score=81.30 Aligned_cols=74 Identities=7% Similarity=0.102 Sum_probs=59.0
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.+++++|.|| ++||++|+...|.+.++.+++++.++.++.|+.+. +..+.+
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~----------------------------~~~l~~ 80 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE----------------------------NQDLCM 80 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT----------------------------CHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC----------------------------CHHHHH
Confidence 5789999999 99999999999999999999977678888887552 135677
Q ss_pred HhCceecCCCceeeEEEEEeCCceE--EEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVI--VYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i--~~~~~ 378 (384)
+||+ ..+|+++++. +|+. ...|.
T Consensus 81 ~~~v------~~~Pt~~~~~-~g~~~~~~~~~ 105 (504)
T 2b5e_A 81 EHNI------PGFPSLKIFK-NSDVNNSIDYE 105 (504)
T ss_dssp HTTC------CSSSEEEEEE-TTCTTCEEECC
T ss_pred hcCC------CcCCEEEEEe-CCccccceeec
Confidence 8888 6788888886 5664 44444
No 415
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.01 E-value=6.2e-06 Score=68.22 Aligned_cols=44 Identities=7% Similarity=0.056 Sum_probs=37.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+++|||.|| ++||++|+...|.|.++.+++.+ .+.++-|.+|.
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe 83 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITE 83 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCC
Confidence 3579999999 99999999999999999999853 36777777764
No 416
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.99 E-value=1.3e-05 Score=79.30 Aligned_cols=73 Identities=7% Similarity=0.055 Sum_probs=58.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 348 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 348 (384)
.|++++|+|| ++||++|+...|.+.++.+++++. +.++.|+.+. +..+.+
T Consensus 20 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~----------------------------~~~l~~ 69 (481)
T 3f8u_A 20 SAGLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA----------------------------NTNTCN 69 (481)
T ss_dssp SSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT----------------------------CHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC----------------------------CHHHHH
Confidence 3489999999 999999999999999999998755 7777777653 245678
Q ss_pred HhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 349 DYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 349 ~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
+||+ ..+|+.+++ ++|+++..|.
T Consensus 70 ~~~v------~~~Ptl~~~-~~g~~~~~~~ 92 (481)
T 3f8u_A 70 KYGV------SGYPTLKIF-RDGEEAGAYD 92 (481)
T ss_dssp HTTC------CEESEEEEE-ETTEEEEECC
T ss_pred hcCC------CCCCEEEEE-eCCceeeeec
Confidence 8998 688977666 6887776555
No 417
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.95 E-value=3.1e-06 Score=69.49 Aligned_cols=72 Identities=21% Similarity=0.249 Sum_probs=44.2
Q ss_pred CeEEEEEeeCCC--CCCchHHHHHHHHhHHHHHhCCcE--EEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchh
Q psy17178 81 KYLVFFFYPLDF--TFVCPTEILAFNDRLEEFHQINTE--VVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 156 (384)
Q Consensus 81 k~vvl~f~~~~~--cp~C~~~~~~l~~~~~~~~~~~v~--vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 156 (384)
+.+||+|| ++| |++|+...|.|.++.+++ .++. ++.|+.|. ..++
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~----------------------------~~~l 83 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQ----------------------------SEAI 83 (142)
T ss_dssp CSEEEEEC-CCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHH----------------------------HHHH
T ss_pred CCEEEEEE-CCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCC----------------------------CHHH
Confidence 34677777 655 999999999999999988 3566 77776542 2347
Q ss_pred HHhhcCcccCCCCcccceeEEEEEEEecCCCccccccee
Q psy17178 157 SLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGA 195 (384)
Q Consensus 157 ~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~ 195 (384)
+++||| +++ |+++++ ++|++.....|.
T Consensus 84 a~~~~V--------~~i---PT~~~f-k~G~~v~~~~G~ 110 (142)
T 2es7_A 84 GDRFNV--------RRF---PATLVF-TDGKLRGALSGI 110 (142)
T ss_dssp HHTTTC--------CSS---SEEEEE-SCC----CEESC
T ss_pred HHhcCC--------CcC---CeEEEE-eCCEEEEEEeCC
Confidence 778888 333 355677 899987665554
No 418
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.94 E-value=5e-06 Score=67.72 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCCeEEEEEeeCCC--CCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchh
Q psy17178 79 YGKYLVFFFYPLDF--TFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKI 156 (384)
Q Consensus 79 ~gk~vvl~f~~~~~--cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 156 (384)
.+++|||+|| +.| |++|+...|.|.++.++|.++.+.++-|++|. ..++
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe----------------------------~~~l 83 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ----------------------------SEAI 83 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH----------------------------HHHH
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC----------------------------CHHH
Confidence 4568889888 877 99999999999999998864336665554442 3457
Q ss_pred HHhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 157 SLDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 157 ~~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+.+||| ++++ ++++=++|++.+...|..
T Consensus 84 A~~ygV--------~sIP----TlilFk~G~~v~~~~G~~ 111 (140)
T 2qgv_A 84 GDRFGA--------FRFP----ATLVFTGGNYRGVLNGIH 111 (140)
T ss_dssp HHHHTC--------CSSS----EEEEEETTEEEEEEESCC
T ss_pred HHHcCC--------ccCC----EEEEEECCEEEEEEecCC
Confidence 778888 3434 345558998877666654
No 419
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.94 E-value=5.6e-06 Score=73.00 Aligned_cols=45 Identities=13% Similarity=-0.042 Sum_probs=35.9
Q ss_pred eeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 263 IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 263 ~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
+.+.+..||++|+.|| +.|||+|+...+.|+++.+ .+++++.+..
T Consensus 79 ~~~g~~~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYKAPQEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp EEECCTTCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred eeecCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 4444567899999999 9999999999999988764 3688776653
No 420
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.94 E-value=4.1e-06 Score=71.07 Aligned_cols=53 Identities=4% Similarity=-0.067 Sum_probs=37.2
Q ss_pred cceEEccccCCCeEEEEEeeCCCCCCchHHHHH---HHHhHHHHHhCCcEEEEEeCCC
Q psy17178 70 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILA---FNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 70 g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~---l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+.+.....+||+|+|+|| ++||++|+...++ ..++.+.+++ ++.++-|..|.
T Consensus 29 ~ea~~~A~~~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de 84 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREE 84 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTT
T ss_pred HHHHHHHHHhCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcc
Confidence 3446666668999999999 9999999986662 2344444443 57777776664
No 421
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.92 E-value=8.8e-06 Score=63.42 Aligned_cols=40 Identities=18% Similarity=0.108 Sum_probs=33.3
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+++++|+|+ ++|||+|+.-.|.|.++.++ .++.++-|.+|
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd 63 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQ 63 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEee
Confidence 689999999 99999999999999998873 35667766555
No 422
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.91 E-value=1.3e-05 Score=57.62 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=28.3
Q ss_pred EEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEE
Q psy17178 83 LVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAA 120 (384)
Q Consensus 83 vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~V 120 (384)
..|.|| ++|||+|+...|.+.++.++++. ++.++.|
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v 37 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKI 37 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEe
Confidence 358899 88999999999999999887742 4555544
No 423
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.89 E-value=1.6e-05 Score=64.43 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=54.1
Q ss_pred CeEEEEEeeCCCC--CCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhHH
Q psy17178 81 KYLVFFFYPLDFT--FVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISL 158 (384)
Q Consensus 81 k~vvl~f~~~~~c--p~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 158 (384)
+++||.|| ++|| ++|+...|-|.++.++|.+ .+.++-|++|. +.+++.
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe----------------------------~~~la~ 83 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEA----------------------------ERGLMA 83 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGG----------------------------HHHHHH
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCC----------------------------CHHHHH
Confidence 49999999 8899 9999999999999998853 46665555443 345777
Q ss_pred hhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 159 DYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 159 ~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
+||| ++++ ++++=++|++.+...|..
T Consensus 84 ~ygV--------~siP----TlilFkdG~~v~~~vG~~ 109 (137)
T 2qsi_A 84 RFGV--------AVCP----SLAVVQPERTLGVIAKIQ 109 (137)
T ss_dssp HHTC--------CSSS----EEEEEECCEEEEEEESCC
T ss_pred HcCC--------ccCC----EEEEEECCEEEEEEeCCC
Confidence 7888 3333 234448998887666655
No 424
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.84 E-value=6.1e-05 Score=62.47 Aligned_cols=76 Identities=9% Similarity=-0.060 Sum_probs=50.9
Q ss_pred cCCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCch
Q psy17178 268 YYGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTH 344 (384)
Q Consensus 268 ~~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 344 (384)
-.||+++|+|+ +.||..|...-... .++.+.++ +++.++-+.+|+++. .
T Consensus 40 ~~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~~~~--------------------------~ 91 (153)
T 2dlx_A 40 MQNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDSEEG--------------------------Q 91 (153)
T ss_dssp HHTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSSHHH--------------------------H
T ss_pred HcCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCCHhH--------------------------H
Confidence 35899999999 99999998764333 23333332 256666666654321 2
Q ss_pred HHHHHhCceecCCCceeeEEEEEeCC-ceEEEEE
Q psy17178 345 KISLDYGVYLSDQGHTLDKYCLECYK-MVIVYWF 377 (384)
Q Consensus 345 ~~~~~~gv~~~~~~~~~p~~~lId~~-G~i~~~~ 377 (384)
.+.+.|++ ...|+++++|++ |+.+..+
T Consensus 92 ~l~~~y~v------~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 92 RYIQFYKL------GDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp HHHHHHTC------CSSSEEEEECTTTCCCCEEE
T ss_pred HHHHHcCC------CCCCEEEEEeCCCCcEeeec
Confidence 34567888 578899999998 8665544
No 425
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.84 E-value=5.1e-06 Score=65.49 Aligned_cols=76 Identities=11% Similarity=0.009 Sum_probs=49.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHH-hCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH-QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 347 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~-~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 347 (384)
+.+.+||+|| +.||+.|+...+.+...++... ...+.++-|.+|... ...++
T Consensus 17 ~~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~--------------------------~~~la 69 (116)
T 3dml_A 17 KAELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPL--------------------------PPGLE 69 (116)
T ss_dssp --CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCC--------------------------CTTCB
T ss_pred cCCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCC--------------------------chhHH
Confidence 4567899999 9999999987766554443211 123566666666321 01223
Q ss_pred HHhCceecCCCceeeEEEEEeCCceEEEEEe
Q psy17178 348 LDYGVYLSDQGHTLDKYCLECYKMVIVYWFE 378 (384)
Q Consensus 348 ~~~gv~~~~~~~~~p~~~lId~~G~i~~~~~ 378 (384)
..|++ ..+|+.++++ +|+.+.+..
T Consensus 70 ~~~~V------~g~PT~i~f~-~G~ev~Ri~ 93 (116)
T 3dml_A 70 LARPV------TFTPTFVLMA-GDVESGRLE 93 (116)
T ss_dssp CSSCC------CSSSEEEEEE-TTEEEEEEE
T ss_pred HHCCC------CCCCEEEEEE-CCEEEeeec
Confidence 45677 6789999999 999998665
No 426
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.83 E-value=2.3e-05 Score=74.21 Aligned_cols=44 Identities=5% Similarity=-0.015 Sum_probs=37.6
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHH-------HHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILA-------FNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~-------l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+++++|.|| ++||+ |+..+|. +.++.+++++.++.+..|+.+.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~ 77 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK 77 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC
Confidence 4689999999 99999 9888898 7888888877678888888765
No 427
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.81 E-value=9.4e-06 Score=72.86 Aligned_cols=42 Identities=12% Similarity=0.000 Sum_probs=36.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+|++|||+|| ++||++|+...|.|.++.++|. ++.++.|..+
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHH
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 4789999999 9999999999999999999885 4888877654
No 428
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.78 E-value=8.1e-05 Score=63.20 Aligned_cols=44 Identities=7% Similarity=0.149 Sum_probs=35.6
Q ss_pred CCeEEEEEEeC-------CCCcCchHhHHHHHHHHHHHHh----CCcEEEEEeCCC
Q psy17178 270 GKYLVFFFYPL-------DFTFVCPTEILAFNDRLEEFHQ----INTEVVAASVDS 314 (384)
Q Consensus 270 Gk~vvl~F~~a-------~~c~~C~~~~~~l~~l~~~~~~----~~v~vv~Is~d~ 314 (384)
+.++||.|| | .||++|+...|.++++.+++.. ..+.+.-|.+|.
T Consensus 37 ~~~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~ 91 (178)
T 3ga4_A 37 GYFNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE 91 (178)
T ss_dssp TCEEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT
T ss_pred CCcEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc
Confidence 458999999 6 5999999999999999999962 346666666664
No 429
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.73 E-value=2e-05 Score=68.00 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=37.4
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
.||++|+.|| ..|||.|....|.+.++.+++.+ ++.+.-+.++
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 5899999999 99999999999999999988865 5788777765
No 430
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.63 E-value=8e-05 Score=71.34 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=38.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh-----CCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-----INTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~-----~~v~vi~Vs~d~ 124 (384)
.+++++|.|| +.||++|+...|.+.++.+++++ .++.++.|+.+.
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~ 70 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ 70 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc
Confidence 4789999999 99999999999999999999863 347777777664
No 431
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.61 E-value=1.4e-05 Score=70.45 Aligned_cols=46 Identities=13% Similarity=-0.055 Sum_probs=36.5
Q ss_pred eEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 72 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 72 ~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
.+.+.+..||++|+.|| ..|||+|+...+.|.++.+ .++.++.+..
T Consensus 78 ~~~~g~~~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 78 MIVYKAPQEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp SEEECCTTCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CeeecCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 35555667899999999 9999999999999888654 3788776654
No 432
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.60 E-value=4.9e-05 Score=65.31 Aligned_cols=42 Identities=14% Similarity=0.005 Sum_probs=35.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
.|+++|+.|| ..|||.|....|.|.++.+++.+ ++.+.-+.+
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 6899999999 99999999999999999888765 576665554
No 433
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.59 E-value=0.00013 Score=65.28 Aligned_cols=46 Identities=13% Similarity=-0.037 Sum_probs=37.2
Q ss_pred ccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh---CCcEEEEEeCC
Q psy17178 77 DYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ---INTEVVAASVD 123 (384)
Q Consensus 77 ~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~---~~v~vi~Vs~d 123 (384)
+++|+++++.|| ++|||+|+...|.++++.++++. .++.+..|..+
T Consensus 135 ~~~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~ 183 (243)
T 2hls_A 135 SLKGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY 183 (243)
T ss_dssp HCCSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred HcCCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc
Confidence 456888899999 99999999999999999998852 45666666543
No 434
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.54 E-value=2.5e-05 Score=66.01 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=38.7
Q ss_pred cceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEe
Q psy17178 70 LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS 121 (384)
Q Consensus 70 g~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs 121 (384)
+..+.+.+..+|++|+.|| ..|||+|....|.+.++.+++.+ +.++.+.
T Consensus 12 ~~~~~~G~~~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TTSCEEECTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCcCCCCCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 4456667778899999999 99999999999999999887643 4544443
No 435
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.53 E-value=6.2e-05 Score=59.55 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=36.4
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++++||.|| ++||++|+...|.|.++.+++. ++.++-|+.|.
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred CCeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 459999999 9999999999999999999884 58888887764
No 436
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.52 E-value=5.9e-05 Score=66.44 Aligned_cols=42 Identities=12% Similarity=0.018 Sum_probs=36.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+|++|||.|| ++||++|+...|.|.++.++|. ++.++.|..+
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 4689999999 9999999999999999998873 6788877654
No 437
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.51 E-value=0.0001 Score=72.01 Aligned_cols=45 Identities=16% Similarity=0.048 Sum_probs=39.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhC-------CcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-------NTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~-------~v~vi~Vs~d~ 124 (384)
.+|++||+|| ++||++|+...|.+.++.+++++. .+.++.|+.|.
T Consensus 41 ~~k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~ 92 (470)
T 3qcp_A 41 PLCPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS 92 (470)
T ss_dssp GGSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC
Confidence 4589999999 999999999999999999998643 38888888875
No 438
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.51 E-value=0.00011 Score=57.39 Aligned_cols=27 Identities=11% Similarity=0.029 Sum_probs=22.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHH
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRL 297 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~ 297 (384)
+++++++ || ++|||+|....+.|+++.
T Consensus 18 ~~~~vv~-f~-a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 18 SSAPVVV-FS-KTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp TSSSEEE-EE-CTTCHHHHHHHHHHHHHT
T ss_pred cCCCEEE-EE-CCCChhHHHHHHHHHHcC
Confidence 4566665 88 999999999999888774
No 439
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.49 E-value=0.00019 Score=64.25 Aligned_cols=102 Identities=13% Similarity=0.018 Sum_probs=59.7
Q ss_pred eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC---CC--HHhH---------HHHhcCccc
Q psy17178 262 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV---DS--HFTH---------LAWVNTPRK 327 (384)
Q Consensus 262 ~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~---d~--~~~~---------~~~~~~~~~ 327 (384)
.+.+.+-.+|++|+.|| ..|||.|....+.+.++.++ .++.|+-+.. ++ .... .++.+.+..
T Consensus 89 ~i~~G~~~ak~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 89 WLLDGKKDAPVIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp CEEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred CceECCCCCCeEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 34444556888999999 99999999999999887653 3576665543 11 1111 111111110
Q ss_pred cCCCCCcc--------eeEEecCchHHHHHhCceecCCCceeeEEEEEeCCceE
Q psy17178 328 EGGLGKLK--------IPLLSDLTHKISLDYGVYLSDQGHTLDKYCLECYKMVI 373 (384)
Q Consensus 328 ~~~~~~~~--------~~~~~D~~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i 373 (384)
.....++. .....+.+..+++++|+ ..+|++++.|.+|++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv------~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGA------NVTPAIYYMSKENTL 212 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTC------CSSCEEEEEETTTEE
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCC------CCCCEEEEECCCCCE
Confidence 00000111 00012233567788998 789999998888976
No 440
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.47 E-value=0.00046 Score=65.67 Aligned_cols=70 Identities=6% Similarity=-0.018 Sum_probs=51.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhH------HHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEI------LAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDL 342 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~------~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 342 (384)
.+++++|.|| |.||++|...- |.++++.+.+++.++.+..|..+..
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~--------------------------- 80 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD--------------------------- 80 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT---------------------------
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc---------------------------
Confidence 4689999999 99999874332 5778888877666677777776531
Q ss_pred chHHHHHhCceecCCCceeeEEEEEeCCceEE
Q psy17178 343 THKISLDYGVYLSDQGHTLDKYCLECYKMVIV 374 (384)
Q Consensus 343 ~~~~~~~~gv~~~~~~~~~p~~~lId~~G~i~ 374 (384)
..++++||| ..+|+.+++. +|+.+
T Consensus 81 -~~l~~~~~V------~~~PTl~~f~-~G~~~ 104 (367)
T 3us3_A 81 -AAVAKKLGL------TEEDSIYVFK-EDEVI 104 (367)
T ss_dssp -HHHHHHHTC------CSTTEEEEEE-TTEEE
T ss_pred -HHHHHHcCC------CcCceEEEEE-CCcEE
Confidence 356778888 6788888876 67764
No 441
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.47 E-value=0.00012 Score=63.00 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=35.6
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
.|+++|+.|| ..|||.|....+.|.++.++++. ++.+..+.+
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 5788999998 99999999999999999988754 577776665
No 442
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.41 E-value=0.00031 Score=51.00 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=43.5
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCCHHhHHHHhcCccccCCCCCcceeEEecCchHHHHHhCce
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVY 353 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 353 (384)
++.|| ++|||.|....+.++++.+++ ++.+..+.+|... .+..+.+.||+
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~-------------------------~~~~~~~~~gv- 53 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTDK-------------------------ARIAEAEKAGV- 53 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTCS-------------------------STHHHHHHHTC-
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCCh-------------------------hhHHHHHHcCC-
Confidence 45677 999999999999988876443 4555555555210 12345677888
Q ss_pred ecCCCceeeEEEEEeCCceEEE
Q psy17178 354 LSDQGHTLDKYCLECYKMVIVY 375 (384)
Q Consensus 354 ~~~~~~~~p~~~lId~~G~i~~ 375 (384)
..+|++++ +|+++.
T Consensus 54 -----~~vPt~~i---~g~~~~ 67 (80)
T 2k8s_A 54 -----KSVPALVI---DGAAFH 67 (80)
T ss_dssp -----CEEEEEEE---TTEEEE
T ss_pred -----CcCCEEEE---CCEEEE
Confidence 68887665 788654
No 443
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.35 E-value=2.8e-05 Score=61.17 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=45.4
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHH-hCCcEEEEEeCCCHHhHHhhccCccccCCCCccceeEEeeCcchhH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH-QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKIS 157 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~-~~~v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 157 (384)
+.+.+||.|| +.||++|+.--+.+...++... ...+.++-|.++.. ....++
T Consensus 17 ~~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~--------------------------~~~~la 69 (116)
T 3dml_A 17 KAELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP--------------------------LPPGLE 69 (116)
T ss_dssp --CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC--------------------------CCTTCB
T ss_pred cCCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC--------------------------CchhHH
Confidence 4468999999 9999999987665443332211 11244444444431 012234
Q ss_pred HhhcCcccCCCCcccceeEEEEEEEecCCCcccccceee
Q psy17178 158 LDYGVYLSDQGPVRGSLLSTAIFVYALTSPVNGYAGGAL 196 (384)
Q Consensus 158 ~~ygv~~~~~g~~~g~~~~~~~~vid~~G~v~~~~~g~~ 196 (384)
..|+| ..+|++++++ +|+......|..
T Consensus 70 ~~~~V-----------~g~PT~i~f~-~G~ev~Ri~G~~ 96 (116)
T 3dml_A 70 LARPV-----------TFTPTFVLMA-GDVESGRLEGYP 96 (116)
T ss_dssp CSSCC-----------CSSSEEEEEE-TTEEEEEEECCC
T ss_pred HHCCC-----------CCCCEEEEEE-CCEEEeeecCCC
Confidence 44555 2345677788 998877666665
No 444
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.34 E-value=0.00072 Score=56.89 Aligned_cols=50 Identities=8% Similarity=-0.025 Sum_probs=39.8
Q ss_pred eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeC
Q psy17178 262 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASV 312 (384)
Q Consensus 262 ~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~ 312 (384)
.+.+.+..++++|+.|+ ..+||.|....+.+.++.++|.+ .+++++....
T Consensus 19 ~~~~G~~~a~v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCCCCCeEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 45566667898888888 99999999999999999988844 3477776654
No 445
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.26 E-value=0.00026 Score=60.62 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=34.4
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
.++++|+.|| ..+||.|....+.+.++.+++.+ ++.+..+..
T Consensus 24 ~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 5788888888 99999999999999999887753 577765554
No 446
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.12 E-value=0.00038 Score=60.85 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=30.7
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEe
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS 311 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is 311 (384)
.+|++|+.|| ..|||+|+...+.|.++.+ .++.+..+.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEE
Confidence 5789999999 9999999999999888543 367776543
No 447
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.11 E-value=0.00038 Score=65.85 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=36.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhC-CcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI-NTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~-~v~vi~Vs~d 123 (384)
.+|+++|.|| ++||++|+...|.+.++.+++++. ++.++.|..+
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 4789999999 999999999999999999999764 4555555443
No 448
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.02 E-value=0.0013 Score=55.74 Aligned_cols=32 Identities=6% Similarity=0.169 Sum_probs=28.4
Q ss_pred CCCeEEEEEeeC-------CCCCCchHHHHHHHHhHHHHH
Q psy17178 79 YGKYLVFFFYPL-------DFTFVCPTEILAFNDRLEEFH 111 (384)
Q Consensus 79 ~gk~vvl~f~~~-------~~cp~C~~~~~~l~~~~~~~~ 111 (384)
++.+|||.|| + .||++|+.-.|.+.++.+++.
T Consensus 36 ~~~~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 36 PGYFNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp TTCEEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 4568999999 5 599999999999999999996
No 449
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.01 E-value=0.0011 Score=58.26 Aligned_cols=41 Identities=10% Similarity=-0.043 Sum_probs=32.9
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
++.+++.|| ++||++|+...|.+.++.+++ .++.++.|+.+
T Consensus 136 ~~~~~v~F~-a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~ 176 (229)
T 2ywm_A 136 IPIEIWVFV-TTSCGYCPSAAVMAWDFALAN--DYITSKVIDAS 176 (229)
T ss_dssp SCEEEEEEE-CTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGG
T ss_pred CCeEEEEEE-CCCCcchHHHHHHHHHHHHHC--CCeEEEEEECC
Confidence 345578899 999999999999999998887 36777776543
No 450
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.00 E-value=0.0016 Score=47.42 Aligned_cols=37 Identities=8% Similarity=-0.118 Sum_probs=30.6
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
|+.|+ ++|||.|....+.|+++.+++ .++.+.-|+++
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIR 39 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHH
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcC--CCceEEEEecc
Confidence 56677 999999999999999988765 46888877765
No 451
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.98 E-value=0.00041 Score=61.99 Aligned_cols=47 Identities=11% Similarity=0.021 Sum_probs=35.1
Q ss_pred eEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 72 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 72 ~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
.+.+..-.+|.+|+.|+ ..|||+|++..+.+.++.++ .++.+..+..
T Consensus 89 ~i~~G~~~ak~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~ 135 (241)
T 1v58_A 89 WLLDGKKDAPVIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLV 135 (241)
T ss_dssp CEEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEEC
T ss_pred CceECCCCCCeEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEEC
Confidence 35555556788899999 99999999999998876653 3576665543
No 452
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.85 E-value=0.0024 Score=63.69 Aligned_cols=43 Identities=16% Similarity=0.080 Sum_probs=35.0
Q ss_pred cCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 268 YYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 268 ~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
..+++.+..|| +.|||+|+...|.++++..++. ++.+.-|..|
T Consensus 115 ~~~~~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 115 IDGDFEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CCSCEEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred cCCCcceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 34677788888 9999999999999999987763 6777777766
No 453
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.79 E-value=0.00073 Score=57.90 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=35.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
.|+++|+.|| ..|||+|....+.|.++.+++.. ++.+..+..
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 5688899999 99999999999999999888754 577766665
No 454
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=96.78 E-value=0.0015 Score=52.39 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=35.5
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
.++++++.|| ++ |.+|....|.|.++.++|+++ +.++-|++|.
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~ 64 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA 64 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH
Confidence 4578999999 88 678999999999999988654 7888888763
No 455
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.74 E-value=0.00053 Score=62.82 Aligned_cols=37 Identities=8% Similarity=0.095 Sum_probs=28.1
Q ss_pred eeeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHH
Q psy17178 262 EIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEE 299 (384)
Q Consensus 262 ~~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~ 299 (384)
.+.+++..++..++.|| ++|||+|+...|.++++.++
T Consensus 189 ~~~la~~l~~~~vV~F~-A~WC~~Ck~l~p~le~lA~~ 225 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQ 225 (291)
T ss_dssp HHHHHHHHHHTTCEEEE-CTTCHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHhCCCCEEEEE-CCCCHHHHHHHHHHHHHHHH
Confidence 45555554444468899 99999999999999988644
No 456
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=96.67 E-value=0.00087 Score=58.54 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=30.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEe
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAAS 121 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs 121 (384)
.+|++|+.|| ..|||+|+...+.+.++.+ .++.+..+.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEE
Confidence 5688999999 9999999999999888433 367776553
No 457
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=96.64 E-value=0.0048 Score=50.89 Aligned_cols=44 Identities=14% Similarity=0.006 Sum_probs=28.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.||+++|+|+ ++||+.|+.--... .++.+.++ .++.++-+..|+
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~ 87 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDS 87 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSS
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCC
Confidence 5899999999 99999998753322 22222222 256666666654
No 458
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.53 E-value=0.0021 Score=49.82 Aligned_cols=27 Identities=11% Similarity=0.029 Sum_probs=21.9
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhH
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRL 107 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~ 107 (384)
.++++++ || ++|||+|+...+.|.++.
T Consensus 18 ~~~~vv~-f~-a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 18 SSAPVVV-FS-KTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp TSSSEEE-EE-CTTCHHHHHHHHHHHHHT
T ss_pred cCCCEEE-EE-CCCChhHHHHHHHHHHcC
Confidence 4566665 88 999999999999888764
No 459
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.44 E-value=0.002 Score=55.23 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=37.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.|+++|+.|| ..|||+|....|.+.++.+++.+ ++.+.-+.++
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 5789999999 99999999999999999888765 6777777765
No 460
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.38 E-value=0.0048 Score=45.66 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=19.4
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHH
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRL 297 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~ 297 (384)
|+.|| +.||++|....|.|.++.
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~ 25 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQAR 25 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTT
T ss_pred EEEEE-CCCCchHHHHHHHHHHHH
Confidence 67788 999999999888887664
No 461
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.35 E-value=0.0014 Score=49.94 Aligned_cols=39 Identities=5% Similarity=-0.061 Sum_probs=30.6
Q ss_pred CCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 270 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 270 Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
.+++|+.|| +.|||.|....+.|.++. .++.+.-|++|+
T Consensus 15 ~~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~ 53 (100)
T 1wjk_A 15 ALPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITL 53 (100)
T ss_dssp CCCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTS
T ss_pred CCCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCC
Confidence 456778888 999999999888887654 348888888873
No 462
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.25 E-value=0.0022 Score=46.65 Aligned_cols=38 Identities=8% Similarity=-0.105 Sum_probs=30.3
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
|+.|+ ++|||+|....+.|.++.+++ .++.+..|+.+.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~ 40 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRA 40 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHH
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcC--CCceEEEEeccc
Confidence 56677 999999999999999988765 468887776643
No 463
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.25 E-value=0.0023 Score=54.55 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=33.8
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
.++++|+.|| ..+||+|....+.+.++.+++.. ++.+..+..
T Consensus 24 ~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 5677888888 99999999999999998887753 576665554
No 464
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.93 E-value=0.0021 Score=48.85 Aligned_cols=39 Identities=5% Similarity=-0.061 Sum_probs=29.8
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+++|+.|+ +.|||+|....+.|.++. .++.+.-|.+|+
T Consensus 15 ~~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~ 53 (100)
T 1wjk_A 15 ALPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITL 53 (100)
T ss_dssp CCCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTS
T ss_pred CCCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCC
Confidence 346778888 999999998888877653 347788888773
No 465
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.89 E-value=0.014 Score=55.32 Aligned_cols=45 Identities=4% Similarity=-0.091 Sum_probs=35.3
Q ss_pred CCCeEEEEEeeCCCCCCchHHH------HHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEI------LAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~------~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+++++|.|| +.||++|...- |.+.++.+.++..++.+..|..+.
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~ 79 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK 79 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc
Confidence 3579999999 99999874332 578888888876678888888775
No 466
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.88 E-value=0.0057 Score=47.16 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=32.0
Q ss_pred eEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 82 YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 82 ~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.+|+.|| +.|||+|..-.+.|.++.+++ ++.+.-|.+|.
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG 68 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 4678888 999999999999999987764 57777777774
No 467
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.80 E-value=0.0047 Score=47.63 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=31.9
Q ss_pred eEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 272 YLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 272 ~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
.+|+.|| +.||+.|....+.|.++.+++ ++.+.-|++|.
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG 68 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 4577888 999999999999999988764 47777777773
No 468
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.62 E-value=0.021 Score=47.71 Aligned_cols=51 Identities=8% Similarity=-0.024 Sum_probs=39.9
Q ss_pred ceEEccccCCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHh-CCcEEEEEeC
Q psy17178 71 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ-INTEVVAASV 122 (384)
Q Consensus 71 ~~~~l~~~~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~-~~v~vi~Vs~ 122 (384)
..+.+.+..++.+|+.|+ ..+||+|....+.+.++.+++.+ .++.++....
T Consensus 18 ~~~~~G~~~a~v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 18 TGLHIGESNAPVKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SSEEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCcccCCCCCCeEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 346666667888888888 99999999999999999888843 3477776554
No 469
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.59 E-value=0.0069 Score=51.88 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=36.2
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
.++++|+.|| ..|||.|....|.+.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 4789999999 99999999999999999888765 5777666654
No 470
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=95.57 E-value=0.0088 Score=50.91 Aligned_cols=42 Identities=14% Similarity=0.005 Sum_probs=34.7
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
.|+++|+.|| ..|||+|....|.+.++.+++.+ ++.+.-+..
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 5789999999 99999999999999998888765 566665544
No 471
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.44 E-value=0.015 Score=41.64 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=25.1
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
++.|| ++|||.|....+.|.+ .++.+..+++|.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 45677 9999999988777664 357777788774
No 472
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=95.30 E-value=0.0041 Score=44.84 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=25.6
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
+..|| ++|||+|+...+.+.++.++ .++.+..+.+|
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~---~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDP---SKYTVEIVHLG 39 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCT---TTEEEEEEETT
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHh---cCCeEEEEEec
Confidence 56677 99999999999988876543 34444444444
No 473
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.27 E-value=0.018 Score=51.20 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=33.3
Q ss_pred CCCeEEEEEEeC--CCCcCchHhHHHHHHHHHHHHh-CCcEEEEEeCCC
Q psy17178 269 YGKYLVFFFYPL--DFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVDS 314 (384)
Q Consensus 269 ~Gk~vvl~F~~a--~~c~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~ 314 (384)
.+++++|.|| + +||+ ..|.+.++.+++++ .++.|..|++|+
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~ 64 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISD 64 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCC
T ss_pred CCCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCc
Confidence 4579999999 8 9998 88999999998874 457788887663
No 474
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.27 E-value=0.019 Score=45.76 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=34.1
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
.++++++.|| +. |.+|+...|.|.++.++|+.+ +.++-|++|.
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~ 64 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA 64 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH
Confidence 3578999999 77 678999999999999988643 7777776653
No 475
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.22 E-value=0.011 Score=50.64 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=35.2
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d 123 (384)
.++++|+.|| ..|||+|....|.+.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 4688999999 99999999999999998887765 5666666554
No 476
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.19 E-value=0.018 Score=41.19 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=24.9
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++.|+ ++|||+|+...+.|.+ .++.+..|+.|.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 45677 9999999998777765 356667777764
No 477
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.09 E-value=0.042 Score=43.65 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=21.6
Q ss_pred EEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 276 FFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 276 ~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
.|+ +.|||.|+...+.|.++ ++.+..+.+|.
T Consensus 31 vf~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~ 61 (130)
T 2cq9_A 31 IFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDL 61 (130)
T ss_dssp EEE-CSSCSHHHHHHHHHHHH-------TCCCEEEETTT
T ss_pred EEE-cCCChHHHHHHHHHHHc-------CCCcEEEECcC
Confidence 377 99999999888877664 34445556553
No 478
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.06 E-value=0.0037 Score=53.90 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=35.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d 313 (384)
.++++||.|| +.|||+|....|.+ .++.+++.+ ++.+.-+.++
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 4688999999 99999999999988 888887753 5777777765
No 479
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.97 E-value=0.025 Score=56.19 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=35.0
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++..+..|| +.|||+|+...|.++++..++. ++.+.-|..|.
T Consensus 117 ~~~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~ 158 (521)
T 1hyu_A 117 GDFEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT 158 (521)
T ss_dssp SCEEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT
T ss_pred CCcceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh
Confidence 556778888 9999999999999999887764 68888888775
No 480
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=94.88 E-value=0.046 Score=48.75 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=33.7
Q ss_pred CCCeEEEEEEe-CCCCcCchHhHHHHHHHHHHHHh--CCcEEEEEeCCC
Q psy17178 269 YGKYLVFFFYP-LDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVDS 314 (384)
Q Consensus 269 ~Gk~vvl~F~~-a~~c~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d~ 314 (384)
.+++++|.||. ++||+ ..|.+.++.+++++ .++.|.-|+.|.
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 45789999985 78997 89999999999875 467777777664
No 481
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.83 E-value=0.03 Score=39.17 Aligned_cols=33 Identities=6% Similarity=0.115 Sum_probs=24.4
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCCC
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 314 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 314 (384)
++.|+ +.|||.|....+.|+++ ++.+..+.++.
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~-------~i~~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDRA-------GLAYNTVDISL 35 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT-------TCCCEEEETTT
T ss_pred EEEEe-CCCChHHHHHHHHHHHc-------CCCcEEEECCC
Confidence 45566 99999999888877643 56677777764
No 482
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.77 E-value=0.016 Score=42.83 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=19.3
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhH
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRL 107 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~ 107 (384)
|+.|| +.||++|+...|.|.++.
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~ 25 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQAR 25 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTT
T ss_pred EEEEE-CCCCchHHHHHHHHHHHH
Confidence 67788 999999999888887654
No 483
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.68 E-value=0.0056 Score=52.73 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=34.9
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d 123 (384)
.++++||.|| +.|||+|..-.|.+ .++.+++.+ ++.+.-+.++
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 5789999999 99999999999988 887777753 5777666664
No 484
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=94.57 E-value=0.036 Score=41.86 Aligned_cols=23 Identities=13% Similarity=0.070 Sum_probs=18.2
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHH
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRL 297 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~ 297 (384)
++.|+ ++|||.|....+.|.++.
T Consensus 14 v~~f~-~~~C~~C~~~~~~L~~~~ 36 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKTQELLSQLP 36 (105)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHSC
T ss_pred EEEEE-cCCCHhHHHHHHHHHHcC
Confidence 55677 999999998888777653
No 485
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=94.29 E-value=0.054 Score=44.09 Aligned_cols=20 Identities=20% Similarity=0.228 Sum_probs=16.2
Q ss_pred EEEeCCCCcCchHhHHHHHHH
Q psy17178 276 FFYPLDFTFVCPTEILAFNDR 296 (384)
Q Consensus 276 ~F~~a~~c~~C~~~~~~l~~l 296 (384)
.|+ ++|||.|....+.|.++
T Consensus 53 vf~-~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 53 IFS-KTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEE-CTTCHHHHHHHHHHHHH
T ss_pred EEE-CCCChhHHHHHHHHHHc
Confidence 377 99999999888877654
No 486
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.20 E-value=0.039 Score=42.64 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=16.9
Q ss_pred EEEEEEeCCCCcCchHhHHHHHH
Q psy17178 273 LVFFFYPLDFTFVCPTEILAFND 295 (384)
Q Consensus 273 vvl~F~~a~~c~~C~~~~~~l~~ 295 (384)
.|+.|+ ++|||.|....+.|.+
T Consensus 20 ~vv~f~-~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNALDILNK 41 (114)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHTT
T ss_pred CEEEEE-eCCChhHHHHHHHHHH
Confidence 456677 9999999987776654
No 487
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=94.19 E-value=0.048 Score=48.40 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=30.8
Q ss_pred CCCeEEEEEeeC--CCCCCchHHHHHHHHhHHHHHh-CCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPL--DFTFVCPTEILAFNDRLEEFHQ-INTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~--~~cp~C~~~~~~l~~~~~~~~~-~~v~vi~Vs~d 123 (384)
.+++++|.|| + .||+ -.|.+.++.++++. .++.+.-|.+|
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd 63 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGIS 63 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCC
T ss_pred CCCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 3578999999 7 8888 78888998888864 35666667654
No 488
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.15 E-value=0.053 Score=37.88 Aligned_cols=33 Identities=6% Similarity=0.115 Sum_probs=24.2
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCC
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDS 124 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~ 124 (384)
++.|+ +.|||+|+...+.|.++ |+.+..+..+.
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~-------~i~~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDRA-------GLAYNTVDISL 35 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT-------TCCCEEEETTT
T ss_pred EEEEe-CCCChHHHHHHHHHHHc-------CCCcEEEECCC
Confidence 45566 99999999988877653 56666677664
No 489
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=93.98 E-value=0.07 Score=43.48 Aligned_cols=41 Identities=22% Similarity=0.091 Sum_probs=30.2
Q ss_pred eeccccCCCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEE
Q psy17178 263 IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAA 310 (384)
Q Consensus 263 ~~l~d~~Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~I 310 (384)
+.+..-.|+++|+.|. ..+||.|....+.+.++ .+++++.+
T Consensus 7 i~~~~~~a~~~vv~f~-D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFS-DPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp EEEEETTCCEEEEEEE-CTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred eeeecCCCCEEEEEEE-CCCChhHHHHHHHHhhc------CceEEEEE
Confidence 4444446788888888 99999999999988664 34665544
No 490
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=93.46 E-value=0.096 Score=40.77 Aligned_cols=35 Identities=11% Similarity=0.198 Sum_probs=21.1
Q ss_pred EEEEEeCCCCcCchHh-HHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 274 VFFFYPLDFTFVCPTE-ILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~-~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
|+.|+ ++|||.|... .+.|.++. ...+.+..+.+|
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~L~~~~----~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTLFEKLK----VPRSKVLVLQLN 62 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHTTSC----CCGGGEEEEEGG
T ss_pred EEEEE-cCCCcCHHHHHHHHHHHcC----CCCCCeEEEECc
Confidence 44577 9999999876 44443221 111666666665
No 491
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=93.16 E-value=0.13 Score=45.84 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=30.2
Q ss_pred CCCeEEEEEee-CCCCCCchHHHHHHHHhHHHHHh--CCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYP-LDFTFVCPTEILAFNDRLEEFHQ--INTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~-~~~cp~C~~~~~~l~~~~~~~~~--~~v~vi~Vs~d 123 (384)
.+++++|.||. ++||+ -.|.+.++.++++. .++.+.-|..|
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC
Confidence 35789999995 78887 78888888888864 35666666544
No 492
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=92.82 E-value=0.043 Score=46.52 Aligned_cols=39 Identities=13% Similarity=-0.061 Sum_probs=31.8
Q ss_pred CCeEEEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeC
Q psy17178 270 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 312 (384)
Q Consensus 270 Gk~vvl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 312 (384)
+|++||.|| ..|||+|....|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 688999999 999999999999999999988 344444443
No 493
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.79 E-value=0.025 Score=48.14 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=32.9
Q ss_pred CCCeEEEEEEeCCCCcCchHhHHHH---HHHHHHHHhCCcEEEEEeCC
Q psy17178 269 YGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 269 ~Gk~vvl~F~~a~~c~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d 313 (384)
.++++|+.|| ..|||+|....|.+ .++.+++.+ +++++-+...
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 4578899999 99999999999986 466665543 5777777653
No 494
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=92.58 E-value=0.044 Score=46.43 Aligned_cols=39 Identities=13% Similarity=-0.061 Sum_probs=31.4
Q ss_pred CCeEEEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeC
Q psy17178 80 GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASV 122 (384)
Q Consensus 80 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~ 122 (384)
++++|+.|| ..|||+|..-.|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 688999999 999999999889999998888 354444443
No 495
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=92.55 E-value=0.2 Score=36.45 Aligned_cols=40 Identities=5% Similarity=0.012 Sum_probs=26.3
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhHHHHHhCCcEEEEEeCCCHHhHHhhc
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLAWV 132 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~v~vi~Vs~d~~~~~~~~~ 132 (384)
++.|+ +.|||.|+...+.|.+ .++.+..|.+| .+..+++.
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~-------~~i~~~~vdv~-~~~~~~l~ 47 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDK-------KGVKYTDIDAS-TSLRQEMV 47 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHH-------HTCCEEEECSC-HHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECC-HHHHHHHH
Confidence 45566 8999999987776655 25666667777 33333343
No 496
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.48 E-value=0.03 Score=47.58 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=32.0
Q ss_pred CCCeEEEEEeeCCCCCCchHHHHHH---HHhHHHHHhCCcEEEEEeCC
Q psy17178 79 YGKYLVFFFYPLDFTFVCPTEILAF---NDRLEEFHQINTEVVAASVD 123 (384)
Q Consensus 79 ~gk~vvl~f~~~~~cp~C~~~~~~l---~~~~~~~~~~~v~vi~Vs~d 123 (384)
.++++|+.|| ..|||+|..-.|.+ .++.+++.+ ++.++-+..+
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 4578999999 99999999998886 455555543 5776666543
No 497
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=92.25 E-value=0.12 Score=38.89 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=17.3
Q ss_pred EEEEEeCCCCcCchHhHHHHHHH
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDR 296 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l 296 (384)
++.|+ ++|||.|....+.|.++
T Consensus 24 v~ly~-~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYG-LSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHH
T ss_pred EEEEc-CCCCchHHHHHHHHHHc
Confidence 45577 99999999888877654
No 498
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=92.11 E-value=0.024 Score=42.88 Aligned_cols=23 Identities=13% Similarity=0.070 Sum_probs=18.4
Q ss_pred EEEEeeCCCCCCchHHHHHHHHhH
Q psy17178 84 VFFFYPLDFTFVCPTEILAFNDRL 107 (384)
Q Consensus 84 vl~f~~~~~cp~C~~~~~~l~~~~ 107 (384)
|+.|+ ++|||+|+...+.|.++.
T Consensus 14 v~~f~-~~~C~~C~~~~~~L~~~~ 36 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKTQELLSQLP 36 (105)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHSC
T ss_pred EEEEE-cCCCHhHHHHHHHHHHcC
Confidence 56677 999999999888777643
No 499
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=91.99 E-value=0.29 Score=35.49 Aligned_cols=32 Identities=3% Similarity=0.095 Sum_probs=23.1
Q ss_pred EEEEEeCCCCcCchHhHHHHHHHHHHHHhCCcEEEEEeCC
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVD 313 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 313 (384)
++.|+ ++|||.|....+.|.+. ++.+.-+.+|
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~~-------~i~~~~vdv~ 39 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDKK-------GVKYTDIDAS 39 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHHH-------TCCEEEECSC
T ss_pred EEEEE-CCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 45566 89999999877766543 4666677777
No 500
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=91.43 E-value=0.26 Score=37.70 Aligned_cols=22 Identities=14% Similarity=0.230 Sum_probs=16.6
Q ss_pred EEEEEeCCCCcCchHhHHHHHHH
Q psy17178 274 VFFFYPLDFTFVCPTEILAFNDR 296 (384)
Q Consensus 274 vl~F~~a~~c~~C~~~~~~l~~l 296 (384)
|+.|+ ++|||.|....+.|.++
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT
T ss_pred EEEEE-CCCChhHHHHHHHHHHc
Confidence 44577 89999999877766553
Done!