RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17179
         (533 letters)



>d1hc7a3 d.68.5.1 (A:404-477) C-terminal domain of ProRS {Thermus
          thermophilus [TaxId: 274]}
          Length = 74

 Score = 25.5 bits (56), Expect = 4.8
 Identities = 6/25 (24%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 7  FKSELNN-IAKTTYCGTRLDEEKLK 30
          FK  +    A   +CG +  E  ++
Sbjct: 10 FKEAVQEGFALAFHCGDKACERLIQ 34


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.145    0.470 

Gapped
Lambda     K      H
   0.267   0.0659    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,127,609
Number of extensions: 105174
Number of successful extensions: 357
Number of sequences better than 10.0: 1
Number of HSP's gapped: 348
Number of HSP's successfully gapped: 47
Length of query: 533
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 443
Effective length of database: 1,171,896
Effective search space: 519149928
Effective search space used: 519149928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.1 bits)