BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1718
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49630|RL36_DROME 60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36
PE=3 SV=1
Length = 115
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 1 MRPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
+R SRLK IQT++TKF RDLVREV GHAPYEKR MELLKVSKDKRALKFLKRR+ ++
Sbjct: 34 LRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHI 91
>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1
Length = 110
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
RPSR KG +K+T+F RDL+REVCG AP+E+RAMELLKVSKDKRALKF+K+R+ ++
Sbjct: 25 RPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHL 81
>sp|Q5RAZ9|RL36_PONAB 60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3
Length = 105
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 49/57 (85%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q9Y3U8|RL36_HUMAN 60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3
Length = 105
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 49/57 (85%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q3T171|RL36_BOVIN 60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3
Length = 105
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 49/57 (85%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q6Q415|RL36_DANRE 60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=3 SV=1
Length = 105
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 4 SRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
SR +G TK+ KF RDL+REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 27 SRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q8UW19|RL36_LAPHA 60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3
SV=1
Length = 105
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R R +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q98TF6|RL36_CHICK 60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1
Length = 105
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R R +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|P39032|RL36_RAT 60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2
Length = 105
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR +G TK+TKF RD++REVC APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 25 RHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3
SV=1
Length = 105
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 48/57 (84%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R R +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+R+ ++
Sbjct: 25 RHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHI 81
>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1
Length = 105
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 48/57 (84%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R R +G TK+TKF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+R+ ++
Sbjct: 25 RHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHI 81
>sp|Q90YT2|RL36_ICTPU 60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3
SV=1
Length = 105
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 4 SRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
SR G TK++KF RD++REVCG APYE+RAMELLKVSKDKRALKF+K+RV ++
Sbjct: 27 SRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHI 81
>sp|P47964|RL36_MOUSE 60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2
Length = 105
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR + T +TKF RD++REVCG APYE+RAMELLKVSK KRALKF+K+RV ++
Sbjct: 25 RHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHI 81
>sp|P49181|RL36_CAEEL 60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36
PE=1 SV=3
Length = 104
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
R +R KG+ +K TK R+LVRE+ G APYE+R +E+L++SKDKRALKFLKRR+ +
Sbjct: 27 RQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTH 82
>sp|P0C6E6|RL36X_HUMAN Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5
SV=1
Length = 105
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
R SR G TK+TK R +++EVCG PYE+ MELLKVSKDK+ALKF+K+RV ++
Sbjct: 25 RHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKDKQALKFIKKRVGTHI 81
>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C
PE=3 SV=1
Length = 108
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
RP+ KG +K T F R+L++EV G APYEKR ELLKV KDKRALK KR++ +
Sbjct: 24 RPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTH 79
>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A
PE=2 SV=1
Length = 113
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
RP+ KG +K T F R L+REV G APYEKR ELLKV KDKRALK KR++ +
Sbjct: 28 RPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTH 83
>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3
SV=1
Length = 101
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLYV 58
RPSR KG ++ K R +VREV G APYE+R MELLKV KDKRALK KR++ ++
Sbjct: 22 RPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHM 78
>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B
PE=2 SV=1
Length = 112
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
RP KG +K T F R+L++EV G APYEKR ELLKV KDKRALK KR++ +
Sbjct: 28 RPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTH 83
>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36a PE=3 SV=2
Length = 99
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVS 55
RPSR KG +K T F R +VREV G APYE+R MEL++ S+DKRA K K+R+
Sbjct: 23 RPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLG 76
>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36b PE=3 SV=1
Length = 99
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVS 55
RPSR KG +K T F R +VREV G APYE+R MEL++ S+DKRA K K+R+
Sbjct: 23 RPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLG 76
>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2
Length = 106
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVS 55
RPS KG +K T F R+L+REV G PYEKR ELLKV KDKRALK + +V
Sbjct: 28 RPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG 81
>sp|Q9HFR7|RL36_TRIHM 60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3
SV=1
Length = 105
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 2 RPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
R SR KG +K T F R++V+EV G APYE+R +ELL+ SKDKRA K K+R+ +
Sbjct: 29 RVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTF 84
>sp|P05745|RL36A_YEAST 60S ribosomal protein L36-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36A PE=1 SV=3
Length = 100
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 7 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
KG + TKF R LVRE+ G +PYE+R ++L++ S +KRA K K+R+ +
Sbjct: 30 KGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSF 80
>sp|O14455|RL36B_YEAST 60S ribosomal protein L36-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36B PE=1 SV=3
Length = 100
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 7 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVSLY 57
KG + TKF R LVRE+ G +PYE+R ++L++ S +KRA K K+R+ +
Sbjct: 30 KGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSF 80
>sp|Q55AQ9|RL36_DICDI 60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36
PE=3 SV=1
Length = 105
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 7 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRVS 55
K + TK RD++RE+ G +PYE+R ELLK DKRALK K+R+
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLG 83
>sp|Q24F59|RL36_TETTS 60S ribosomal protein L36 OS=Tetrahymena thermophila (strain
SB210) GN=RPL36 PE=1 SV=1
Length = 104
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 7 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKV--SKD-KRALKFLKRRVSLY 57
KG K R ++REV G APYEKR +EL+K +KD K+A K ++R+ +
Sbjct: 31 KGKLGKRVALVRQVIREVTGFAPYEKRIIELIKAGSAKDSKKATKIARKRLGTH 84
>sp|P47834|RL36_CANAX 60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1
Length = 99
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 7 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKD 43
KG ++ T F R +V+EV G APYE+R +EL++ + +
Sbjct: 29 KGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGE 65
>sp|A6NE01|F186A_HUMAN Protein FAM186A OS=Homo sapiens GN=FAM186A PE=2 SV=3
Length = 2351
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 46 ALKFLKRRVSLYVLRSAVVLCPTKSRKFDRATRDIIRDRESSHFQLSQKIPTTFVKCESF 105
AL L + +S+ V S + IIRD + + L QK+ KCE
Sbjct: 271 ALSMLNDELKCVNFQSSTVYAHETSEAEKELSLKIIRDLSNENEMLQQKLQDAEEKCEQL 330
Query: 106 YHNSIMLT--WYKLSTKPQRLFTPTPRPRVS 134
+ I++ + KLST P P P+ S
Sbjct: 331 IRSKIVIEQLYAKLSTSSTLKVLPGPSPQSS 361
>sp|Q8SRP1|RL36_ENCCU 60S ribosomal protein L36 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL36 PE=1 SV=1
Length = 107
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 10 QTKNTKFTRDLVR-EVCGHAPYEKRAMELLKVSKDKRALKFLKRRVS 55
+T+ ++F V E+ G +P EK+A+ LL+ + +A K L++R+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLG 88
>sp|Q9DUN3|POLG_VESVA Genome polyprotein OS=Vesicular exanthema of swine virus serotype
A48 (isolate Swine/United States/A48/1948) GN=ORF1 PE=3
SV=1
Length = 1881
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 89 FQLSQKIPTTFVKCESFYHNS-IMLTWYKLSTKPQRLFTPTPRPR 132
F+ Q IPT V+CE H+S + S + +R+ TPTP PR
Sbjct: 23 FKPHQPIPTWMVRCEPLDHDSRRGRDPVRASPQAKRVRTPTPYPR 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,031,299
Number of Sequences: 539616
Number of extensions: 1582522
Number of successful extensions: 4447
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4417
Number of HSP's gapped (non-prelim): 33
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)