RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy17181
         (75 letters)



>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
           transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
           3zuu_A 3uc4_A 3ujg_A 3udb_A
          Length = 361

 Score = 24.2 bits (53), Expect = 4.3
 Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 2/39 (5%)

Query: 39  FGYMALFSLG--LGIMCGTVGYVGTSLFVRKIYATVKID 75
           FGY     L        GT  Y+   + +R+ Y     D
Sbjct: 162 FGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIAD 200


>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel,
           FAB complex, membrane protein; 2.51A {Escherichia coli}
           SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A
           2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A
           2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
          Length = 465

 Score = 23.9 bits (52), Expect = 7.3
 Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 17/67 (25%)

Query: 8   HSLLGLPSVFNFVTVRPQQLQMYGLFQTTFYFGYMALFSLGLGIMCGTVGYVGTSLFVRK 67
                  ++ +   +    L    L+             L LGI+ G  G     +F + 
Sbjct: 230 RIFNHEVALIDVGKLSDAPLNTLWLY-------------LILGIIFGIFGP----IFNKW 272

Query: 68  IYATVKI 74
           +     +
Sbjct: 273 VLGMQDL 279


>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog,
           transport protein; 3.20A {Synechocystis} PDB: 3q17_A
          Length = 466

 Score = 23.5 bits (51), Expect = 8.7
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 17/67 (25%)

Query: 8   HSLLGLPSVFNFVTVRPQQLQMYGLFQTTFYFGYMALFSLGLGIMCGTVGYVGTSLFVRK 67
             + G  ++ +    +   L    +F             + LGI+ G +GY     F R 
Sbjct: 225 RMIRGQSAIISLTEFKRVPLDSLWMF-------------IILGILFGVMGY----TFNRG 267

Query: 68  IYATVKI 74
           ++  +  
Sbjct: 268 LFKVLDW 274


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.331    0.145    0.434 

Gapped
Lambda     K      H
   0.267   0.0703    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,115,345
Number of extensions: 51571
Number of successful extensions: 161
Number of sequences better than 10.0: 1
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 7
Length of query: 75
Length of database: 6,701,793
Length adjustment: 44
Effective length of query: 31
Effective length of database: 5,473,269
Effective search space: 169671339
Effective search space used: 169671339
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 51 (23.5 bits)