BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17183
(145 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P KI PLLSD TH ISK YG YL GH+
Sbjct: 113 EVVACSVDSQFTHLAWI----ITPRKQGGLGPMKI-PLLSDLTHQISKDYGVYLEDQGHT 167
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID++G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 168 LRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSDTI 225
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 84 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 138
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 139 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 196
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 109 bits (272), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 127 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 181
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 182 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 239
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 109 bits (272), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 119 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 173
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 174 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 119 EVVACSVDSQFEHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 173
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 174 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 127 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 181
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 182 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 239
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 119 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 173
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D CP W G ++
Sbjct: 174 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 127 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 181
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D P W G ++
Sbjct: 182 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSETI 239
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A SVDS HLAW T + + P +I PLLSD TH ISK YG YL +GH+
Sbjct: 127 EVVACSVDSQFTHLAWINT----PRRQGGLGPIRI-PLLSDLTHQISKDYGVYLEDSGHT 181
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
LR +IID +G LR + ++D+ VGR++ E LR V+AFQ D P W G ++
Sbjct: 182 LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSETI 239
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+I SVDSH +HLAW T + + P I PL+SD I++ YG + G S
Sbjct: 72 QVIGASVDSHFSHLAWINT----PKKQGGLGPMNI-PLVSDPKRTIAQDYGVLKADEGIS 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID +G LR + ++D+ VGR++ EILR V+AFQ D CP W G ++K
Sbjct: 127 FRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAGWKPGSDTIK 185
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+I SVDSH HLAW T + + P I PL+SD I++ YG + G S
Sbjct: 72 QVIGASVDSHFCHLAWINT----PKKQGGLGPMNI-PLVSDPKRTIAQDYGVLKADEGIS 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID +G LR + ++D+ VGR++ EILR V+AFQ D CP W G ++K
Sbjct: 127 FRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAGWKPGSDTIK 185
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+IA S DS +HLAW L S + +PLL+D ISK YG + G++
Sbjct: 102 QVIACSTDSQYSHLAWD-NLDRKSGGLGHMK----IPLLADRKQEISKAYGVFDEEDGNA 156
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKV 143
R +IID G LR + ++D VGR++ E LR ++AFQ V+ CPVNW GQ +KV
Sbjct: 157 FRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGIKV 216
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++AVSVDSH +HLAW T + I LLSD T IS+ YG L G +
Sbjct: 92 EVVAVSVDSHFSHLAWINT----PRKNGGLGHMNIA-LLSDLTKQISRDYGVLLEGPGLA 146
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
LR +IID G ++ ++V+D+ VGR+++E LR V+AFQ V++ P NWT P++K
Sbjct: 147 LRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWTPESPTIK 205
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A S+DS AHL WT + + +P+L+D T I+++YG S G +
Sbjct: 92 EVLACSIDSEYAHLQWT-----LQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVA 146
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID G LR + V+D+ VGR+++E+LR +EAFQ V+ CP NW G P +K
Sbjct: 147 YRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHGEVCPANWKKGDPGMK 205
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+IA S DS +HLAW L S + +PLL+D ISK YG + G++
Sbjct: 105 QVIACSTDSQYSHLAWD-NLDRKSGGLGHMK----IPLLADRKQEISKAYGVFDEEDGNA 159
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKV 143
R +IID G LR + ++D VGR++ E LR ++AFQ V+ CPVNW GQ +KV
Sbjct: 160 FRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGIKV 219
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q++ S DS + LAWT + P I PLL+D+ H++S+ YG + G +
Sbjct: 88 QVLFASTDSEYSLLAWTNI----PRKEGGLGPINI-PLLADTNHSLSRDYGVLIEEEGVA 142
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
LR +IID +G +R + ++D+ VGRN+ E LR VEAFQ D T P NWT G ++K
Sbjct: 143 LRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATIK 201
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+IA S DS +HLAW L S + +PLL+D ISK YG + G++
Sbjct: 102 QVIACSTDSQYSHLAWD-NLDRKSGGLGHMK----IPLLADRKQEISKAYGVFDEEDGNA 156
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKV 143
R +IID G LR + ++D VGR++ E LR ++AFQ V+ CPVNW GQ +KV
Sbjct: 157 FRGLFIIDPNGILRQITLNDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGIKV 216
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+I SVDSH HLAW T + + P I PL+SD I++ YG + G S
Sbjct: 72 QVIGASVDSHFEHLAWVNT----PKKQGGLGPMNI-PLVSDPKRTIAQDYGVLKADEGIS 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID +G LR + V+D+ VGR++ E LR V+AFQ D P W G ++K
Sbjct: 127 FRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVSPAGWKPGSDTIK 185
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++ VSVDS HLAW T + P I PLL+D T +S+ YG + G +
Sbjct: 70 EVLGVSVDSQFTHLAWINT----PRKEGGLGPLNI-PLLADVTRRLSEDYGVLKTDEGIA 124
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID +G LR + V+D+ VGR++ E LR V+AFQ D CP W G ++K
Sbjct: 125 YRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIK 183
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 92.0 bits (227), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
Q+I SVDSH HL W T + + P I PL+SD I++ YG + G S
Sbjct: 72 QVIGASVDSHFEHLEWVNT----PKKQGGLGPMNI-PLVSDPKRTIAQDYGVLKADEGIS 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTG 137
R +IID +G LR + V+D+ VGR++ E LR V+AFQ D P W G
Sbjct: 127 FRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVSPAGWKPG 180
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++A S+DS +HLAWT + R + I P+L+D T I K+YG G +
Sbjct: 72 EVLACSMDSEYSHLAWT----SIERKRGGLGQMNI-PILADKTKCIMKSYGVLKEEDGVA 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID + LR + V+D+ VGR++ E LR V+AFQ V+ CP NW G ++K
Sbjct: 127 YRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWKPGDKTMK 185
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
++I+ S DS +HL WT + + + P I P L+D T AI++ YG +G +
Sbjct: 72 EVISCSCDSEYSHLQWT----SVDRKKGGLGPXAI-PXLADKTKAIARAYGVLDEDSGVA 126
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
R +IID G LR + ++D +GRN++E++R VEA Q V+ CP NW G K
Sbjct: 127 YRGVFIIDPNGKLRQIIINDXPIGRNVEEVIRLVEALQFVEEHGEVCPANWKKGDAKKK 185
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++ +SVDS +HLAW K + ++ L+SD ISK Y L +
Sbjct: 92 ELLGISVDSVYSHLAW-KNMPIEKGGIGNVE----FTLVSDINKDISKNYNV-LYDNSFA 145
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
LR +IIDK G +R V+D+ +GRN++E+LR +++ VD++ CP+NW GQ + K
Sbjct: 146 LRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWKKGQKAFK 204
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++ SVDS HLAW KT A + I K LLSD T +ISK Y + S
Sbjct: 88 ELLGCSVDSKYTHLAWKKTPLA----KGGIGNIKHT-LLSDITKSISKDYNVLFDDS-VS 141
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
LRA+ +ID G ++ + V+++ +GR++ EILR ++A Q + CP NW G+ S+K
Sbjct: 142 LRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGDVCPANWQKGKVSMK 200
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
+++ SVDS HLAW KT + + I K L+SD + +I+++Y + + +
Sbjct: 67 ELLGCSVDSKFTHLAWKKTPLS----QGGIGNIKHT-LISDISKSIARSYDVLFNES-VA 120
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
LRA+ +IDK+G ++ + V+++ +GR++ EILR ++A Q + CP NW G+ S+K
Sbjct: 121 LRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQKGKESMK 179
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 23 FQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGH 82
F +I VS+DS H AW T + I P+++D T +IS+ Y A
Sbjct: 68 FNVIGVSIDSEQVHFAWKNT----PVEKGGIGQVSF-PMVADITKSISRDYDVLFEEA-I 121
Query: 83 SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVK 142
+LR ++IDK +R ++D+ +GRN E+LR V+A + CP W G +K
Sbjct: 122 ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWRKGDKGMK 181
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 71 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 124
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 125 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 179
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 123
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 124 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 178
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 123
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 124 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 178
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 71 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 124
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 125 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 179
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 123
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 124 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 178
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 123
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+M +++GR + EILR V+A +L DS P +W +
Sbjct: 124 VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 178
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 71 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 124
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+ ++GR + EILR V+A +L DS P +W +
Sbjct: 125 VRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 179
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC-YLSSAGHS 83
+I +SVDS +H+ W + + R P+++D +++ G + SA H+
Sbjct: 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPF------PIIADPQGTVARRLGLLHAESATHT 123
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQ 138
+R +I+D RG +R+ ++GR + EILR V+A +L DS P +W +
Sbjct: 124 VRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAVPADWPNNE 178
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPL--LSDSTHAISKTYGCYLSSAG 81
QI+ VS+DS AH W R+ + K +P LSD +S+ G L++ G
Sbjct: 81 QILGVSIDSEFAHFQW----------RAQHNDLKTLPFPXLSDIKRELSQAAGV-LNADG 129
Query: 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSV 141
+ R +I+D ++ ++ + VGRN+ E+LR ++A Q +D C NW G P++
Sbjct: 130 VADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ----SDELCASNWRKGDPTL 185
Query: 142 KVA 144
Sbjct: 186 DAG 188
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFVHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + CP W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFTHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + CP W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFTHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + CP W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFDHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + CP W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFIHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + CP W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHS 83
++ +VS D+H H AW + A S ++ D + IS+ + G +
Sbjct: 67 EVYSVSTDTHFVHKAWHENSPAVGSIEYI--------MIGDPSQTISRQFDVLNEETGLA 118
Query: 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQ-CPVNWTTGQPSVK 142
R +IID G ++++ ++ +GR+ ++ +V+A Q V + CP W G ++K
Sbjct: 119 DRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGGETLK 178
Query: 143 VAL 145
+L
Sbjct: 179 PSL 181
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSL 84
+ +VS D+H H AW + + + A ++ D T A+++ + G +
Sbjct: 67 VYSVSTDTHFTHKAWHSSSETIAKIKYA--------MIGDPTGALTRNFDNMREDEGLAD 118
Query: 85 RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQC-PVNWTTGQPSVKV 143
RA +++D +G ++++ V+ +GR+ ++LR+++A Q V + + P W G+ ++
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEGEATLAP 178
Query: 144 AL 145
+L
Sbjct: 179 SL 180
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVP--LLSDSTHAISKTYGCYLSSAG 81
++IA+S+DS HLAW+K + A +S +P++ +P ++ D ++ G +
Sbjct: 67 KLIALSIDSVEDHLAWSKDINAYNSE----EPTEKLPFPIIDDRNRELAILLGMLDPAEK 122
Query: 82 H------SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWT 135
+ R ++ L+ + GRN EILR V + QL PV+W
Sbjct: 123 DEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWK 182
Query: 136 TG 137
G
Sbjct: 183 DG 184
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCY----LSS 79
++IA+S D+ H W++ + S + + P+++D T ++ G +S
Sbjct: 65 KLIALSCDNVADHKEWSEDVKCLSGVKGDMP----YPIIADETRELAVKLGMVDPDERTS 120
Query: 80 AGHSL--RAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTG 137
G L RA +II L+ + GRN EILR +++ QL P +W G
Sbjct: 121 TGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQLTAQKKVATPADWQPG 180
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 83 SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTG 137
+ R + I +++ + GRN EILR +++ QL +T PVNW G
Sbjct: 127 TCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEG 181
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 83 SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTG 137
+ R + I +++ + GRN EILR +++ QL +T PVNW G
Sbjct: 127 TCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEG 181
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 26 IAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD--STHAISKTYGCYLSSAGHS 83
+A+SV H W AT S + PLLSD A+S+ YG + AG +
Sbjct: 67 LAISVGPPPTHKIW-----ATQSGFT-------FPLLSDFWPHGAVSQAYGVFNEQAGIA 114
Query: 84 LRAYYIIDKRGYLR 97
R +++D+ G +R
Sbjct: 115 NRGTFVVDRSGIIR 128
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 26 IAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD--STHAISKTYGCYLSSAGHS 83
+A+SV H W AT S + PLLSD A+S+ YG + AG +
Sbjct: 74 LAISVGPPPTHKIW-----ATQSGFT-------FPLLSDFWPHGAVSQAYGVFNEQAGIA 121
Query: 84 LRAYYIIDKRGYLR 97
R +++D+ G +R
Sbjct: 122 NRGTFVVDRSGIIR 135
>pdb|1IM9|A Chain A, Crystal Structure Of The Human Natural Killer Cell
Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand
Hla-Cw4
pdb|1IM9|E Chain E, Crystal Structure Of The Human Natural Killer Cell
Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand
Hla-Cw4
Length = 276
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY--YIIDKRGY------LRSMNVSDI--QVGRNLKE 112
D +H + + +GC L G LR Y + D + Y LRS +D Q+ + E
Sbjct: 90 EDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWE 149
Query: 113 ILRQVE 118
R+ E
Sbjct: 150 AAREAE 155
>pdb|1QQD|A Chain A, Crystal Structure Of Hla-Cw4, A Ligand For The Kir2d
Natural Killer Cell Inhibitory Receptor
Length = 273
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY--YIIDKRGY------LRSMNVSDI--QVGRNLKE 112
D +H + + +GC L G LR Y + D + Y LRS +D Q+ + E
Sbjct: 88 EDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWE 147
Query: 113 ILRQVE 118
R+ E
Sbjct: 148 AAREAE 153
>pdb|2B5X|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Reduced Form
pdb|2B5Y|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Oxidized Form
Length = 148
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 20/75 (26%)
Query: 53 IDPSKI----------VPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVS 102
+DP KI P+ DS HA++ + + AYY+ DK G LR
Sbjct: 76 LDPGKIKETAAEHDITQPIFVDSDHALTDAF------ENEYVPAYYVFDKTGQLRHFQAG 129
Query: 103 DIQVGRNLKEILRQV 117
G +K + ++V
Sbjct: 130 ----GSGMKMLEKRV 140
>pdb|1EFX|A Chain A, Structure Of A Complex Between The Human Natural Killer
Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3
Length = 278
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGY------LRSMNVSDI--QVGRNLKEIL 114
+H I + YGC + G LR Y Y D + Y LRS +D Q+ + E
Sbjct: 91 GSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAA 150
Query: 115 RQVE 118
R+ E
Sbjct: 151 REAE 154
>pdb|3RWC|A Chain A, Crystal Structure Of Rhesus Macaque Mhc Class I Molecule
Mamu-B17-Iw9
pdb|3RWC|D Chain D, Crystal Structure Of Rhesus Macaque Mhc Class I Molecule
Mamu-B17-Iw9
pdb|3RWD|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Iw11
pdb|3RWD|D Chain D, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Iw11
pdb|3RWE|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Fw9
pdb|3RWF|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Qw9
pdb|3RWG|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Mw9
pdb|3RWH|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Mf8
pdb|3RWH|D Chain D, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Mf8
pdb|3RWI|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Gw10
pdb|3RWJ|A Chain A, Rhesus Macaque Mhc Class I Molecule Mamu-B17-Hw8
Length = 276
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 65 STHAISKTYGCYLSSAGHSLRAYY--IIDKRGY------LRSMNVSDI 104
+H I K YGC L G LR Y+ D + Y LRS +D+
Sbjct: 91 GSHTIQKMYGCDLGPDGRLLRGYHQSAYDGKDYIALNGDLRSWTAADM 138
>pdb|1KJM|A Chain A, Tap-A-Associated Rat Mhc Class I Molecule
Length = 285
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 65 STHAISKTYGCYLSSAGHSLRAYY--IIDKRGY------LRSMNVSDI--QVGRNLKEIL 114
+H I + YGC + S G LR Y D R Y L++ +D Q+ RN E
Sbjct: 91 GSHTIQEMYGCDVGSDGSLLRGYRQDAYDGRDYIALNEDLKTWTAADFAAQITRNKWERA 150
Query: 115 RQVE 118
R E
Sbjct: 151 RYAE 154
>pdb|3JTS|A Chain A, Gy9-Mamu-A02-Hb2m
pdb|3JTS|D Chain D, Gy9-Mamu-A02-Hb2m
pdb|3JTS|G Chain G, Gy9-Mamu-A02-Hb2m
pdb|3JTT|A Chain A, Cystal Structure Of Rhesus Macaque Mhc Class I:mamu-A02
pdb|3JTT|D Chain D, Cystal Structure Of Rhesus Macaque Mhc Class I:mamu-A02
pdb|3JTT|G Chain G, Cystal Structure Of Rhesus Macaque Mhc Class I:mamu-A02
Length = 276
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 65 STHAISKTYGCYLSSAGHSLRAYY--IIDKRGY------LRSMNVSDIQVGRNLKEILRQ 116
+H I + YGC L G LR Y+ D + Y LRS +D+ ++
Sbjct: 91 GSHTIQRMYGCDLGPDGRLLRGYHQSAYDGKDYIALNEDLRSWTAADMAAQNTQRKWEAA 150
Query: 117 VEAFQLVDSTDTQC 130
EA Q + +C
Sbjct: 151 GEAEQHRTYLEGEC 164
>pdb|1ED3|A Chain A, Crystal Structure Of Rat Minor Histocompatibility Antigen
Complex Rt1-AaMTF-E.
pdb|1ED3|D Chain D, Crystal Structure Of Rat Minor Histocompatibility Antigen
Complex Rt1-AaMTF-E
Length = 275
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 65 STHAISKTYGCYLSSAGHSLRAYY--IIDKRGY------LRSMNVSDI--QVGRNLKEIL 114
+H I + YGC + S G LR Y D R Y L++ +D Q+ RN E
Sbjct: 91 GSHTIQEMYGCDVGSDGSLLRGYRQDAYDGRDYIALNEDLKTWTAADFAAQITRNKWERA 150
Query: 115 RQVE 118
R E
Sbjct: 151 RYAE 154
>pdb|1KJV|A Chain A, Tap-B-Associated Rat Mhc Class I Molecule
Length = 284
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGYL 96
+H I + YGC + S G LR Y + D R Y+
Sbjct: 91 GSHTIQEMYGCDVGSDGSLLRGYEQFAYDGRDYI 124
>pdb|2XFX|A Chain A, Cattle Mhc Class I N01301 Presenting An 11mer From
Theileria Parva
Length = 277
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGY------LRSMNVSDI--QVGRNLKEIL 114
+H + + YGC + S G R Y Y D R Y LRS +D Q+ + E
Sbjct: 91 GSHTLQEMYGCDVGSDGRLRRGYEQYGYDGRDYLALNEDLRSWTAADTAAQISKRKMEAA 150
Query: 115 RQVEAFQ 121
E F+
Sbjct: 151 GAAERFR 157
>pdb|2XPG|A Chain A, Crystal Structure Of A Mhc Class I-Peptide Complex
pdb|3RL1|A Chain A, Hiv Rt Derived Peptide Complexed To Hla-A0301
pdb|3RL2|A Chain A, Hiv Nef Derived Peptide Nef73 Complexed To Hla-A0301
Length = 274
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 65 STHAISKTYGCYLSSAGHSLRAYY--IIDKRGY------LRSMNVSDIQVGRNLKEILRQ 116
+H I YGC + S G LR Y D + Y LRS +D+ ++
Sbjct: 91 GSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAA 150
Query: 117 VEAFQLVDSTDTQCPVNW 134
EA QL D C V W
Sbjct: 151 HEAEQLRAYLDGTC-VEW 167
>pdb|2E7L|E Chain E, Structure Of A High-Affinity Mutant Of The 2c Tcr In
Complex With LdQL9
pdb|2E7L|F Chain F, Structure Of A High-Affinity Mutant Of The 2c Tcr In
Complex With LdQL9
Length = 181
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY 87
+ TH + + YGC + S G LR Y
Sbjct: 89 AGGTHTLQRMYGCDVGSDGRLLRGY 113
>pdb|1SYV|A Chain A, Hla-B4405 Complexed To The Dominant Self Ligand Eefgraygf
pdb|3DX8|A Chain A, Crystal Structure Of B4405 Presenting A 10mer Ebv Epitope
pdb|3DXA|A Chain A, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405
And Decamer Ebv Antigen
pdb|3DXA|F Chain F, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405
And Decamer Ebv Antigen
pdb|3DXA|K Chain K, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405
And Decamer Ebv Antigen
pdb|3KPP|A Chain A, Crystal Structure Of Hla B4405 In Complex With Eeylqafty A
Self Peptide From The Abcd3 Protein
pdb|3KPQ|A Chain A, Crystal Structure Of Hla B*4405 In Complex With Eeylkawtf,
A Mimotope
pdb|3KPR|A Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla
B4405 Bound To Eeylkawtf A Mimotope
pdb|3KPR|F Chain F, Crystal Structure Of The Lc13 Tcr In Complex With Hla
B4405 Bound To Eeylkawtf A Mimotope
pdb|3KPS|A Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla
B4405 Bound To Eeylqafty A Self Peptide From The Abcd3
Protein
Length = 276
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGYL 96
+H I + YGC + G LR Y Y D + Y+
Sbjct: 91 GSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYI 124
>pdb|3TF7|E Chain E, 42f3 Ql9H2-Ld Complex
pdb|3TF7|A Chain A, 42f3 Ql9H2-Ld Complex
pdb|3TFK|A Chain A, 42f3-P4b10H2-Ld
pdb|3TJH|A Chain A, 42f3-P3a1H2-Ld Complex
pdb|3TPU|I Chain I, 42f3 P5e8H2-Ld Complex
pdb|3TPU|E Chain E, 42f3 P5e8H2-Ld Complex
pdb|3TPU|K Chain K, 42f3 P5e8H2-Ld Complex
pdb|3TPU|Q Chain Q, 42f3 P5e8H2-Ld Complex
Length = 180
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY 87
+ TH + + YGC + S G LR Y
Sbjct: 90 AGGTHTLQRMYGCDVGSDGRLLRGY 114
>pdb|3ERY|A Chain A, Different Thermodynamic Binding Mechanisms And Peptide
Fine Specificities Associated With A Panel Of
Structurally Similar High-Affinity T Cell Receptors
pdb|3ERY|B Chain B, Different Thermodynamic Binding Mechanisms And Peptide
Fine Specificities Associated With A Panel Of
Structurally Similar High-Affinity T Cell Receptors
Length = 174
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY 87
+ TH + + YGC + S G LR Y
Sbjct: 89 AGGTHTLQRMYGCDVGSDGRLLRGY 113
>pdb|2OI9|A Chain A, Structure Of The 2cLDQL9 ALLOGENEIC COMPLEX
Length = 179
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY 87
+ TH + + YGC + S G LR Y
Sbjct: 89 AGGTHTLQRMYGCDVGSDGRLLRGY 113
>pdb|3E2H|A Chain A, Structure Of The M67 High-Affinity Mutant Of The 2c Tcr In
Complex With LdQL9
pdb|3E3Q|A Chain A, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|B Chain B, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|CC Chain c, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|H Chain H, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|L Chain L, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|P Chain P, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|U Chain U, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
pdb|3E3Q|Y Chain Y, Structure Of The 3alpham13 High-Affinity Mutant Of The 2c
Tcr In Complex With LdQL9
Length = 175
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 SDSTHAISKTYGCYLSSAGHSLRAY 87
+ TH + + YGC + S G LR Y
Sbjct: 89 AGGTHTLQRMYGCDVGSDGRLLRGY 113
>pdb|3R6M|A Chain A, Crystal Structure Of Vibrio Parahaemolyticus Yeaz
pdb|3R6M|B Chain B, Crystal Structure Of Vibrio Parahaemolyticus Yeaz
pdb|3R6M|C Chain C, Crystal Structure Of Vibrio Parahaemolyticus Yeaz
pdb|3R6M|D Chain D, Crystal Structure Of Vibrio Parahaemolyticus Yeaz
Length = 213
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 26 IAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVP--LLSDSTHAISKTYGCYLSSAGHS 83
+AV++D+ ++ + W + + +D ++P L++ A SKT+ ++AG
Sbjct: 112 VAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTW----TTAGTG 167
Query: 84 LRAY 87
AY
Sbjct: 168 WSAY 171
>pdb|4DSQ|A Chain A, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|C Chain C, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|D Chain D, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSR|A Chain A, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|C Chain C, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|D Chain D, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
Length = 184
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78
Q+I V+VD+ A+ AW K+L + + SD A +K+ G L+
Sbjct: 93 QVIVVTVDNPFANQAWAKSLGVKDTTH--------IKFASDPGCAFTKSIGFELA 139
>pdb|4DSS|A Chain A, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 176
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78
Q+I V+VD+ A+ AW K+L + + SD A +K+ G L+
Sbjct: 85 QVIVVTVDNPFANQAWAKSLGVKDTTH--------IKFASDPGCAFTKSIGFELA 131
>pdb|4H86|A Chain A, Crystal Structure Of Ahp1 From Saccharomyces Cerevisiae In
Reduced Form
Length = 199
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 24 QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78
Q+I V+VD+ A+ AW K+L + + SD A +K+ G L+
Sbjct: 108 QVIVVTVDNPFANQAWAKSLGVKDTTH--------IKFASDPGCAFTKSIGFELA 154
>pdb|2DYP|A Chain A, Crystal Structure Of Lilrb2(Lir2ILT4CD85D) COMPLEXED WITH
Hla-G
Length = 277
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGYL 96
S+H + GC L S G LR Y Y D + YL
Sbjct: 92 SSHTLQWMIGCDLGSDGRLLRGYEQYAYDGKDYL 125
>pdb|2D31|A Chain A, Crystal Structure Of Disulfide-Linked Hla-G Dimer
pdb|2D31|D Chain D, Crystal Structure Of Disulfide-Linked Hla-G Dimer
Length = 276
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 65 STHAISKTYGCYLSSAGHSLRAY--YIIDKRGYL 96
S+H + GC L S G LR Y Y D + YL
Sbjct: 91 SSHTLQWMIGCDLGSDGRLLRGYEQYAYDGKDYL 124
>pdb|2R8B|A Chain A, The Crystal Structure Of The Protein Atu2452 Of Unknown
Function From Agrobacterium Tumefaciens Str. C58
pdb|2R8B|B Chain B, The Crystal Structure Of The Protein Atu2452 Of Unknown
Function From Agrobacterium Tumefaciens Str. C58
Length = 251
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 40 TKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYL 96
T+ + T+ R I P ++ L +S A T GH +R+ I RG+L
Sbjct: 188 TRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFL 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,821,185
Number of Sequences: 62578
Number of extensions: 127233
Number of successful extensions: 497
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 73
length of query: 145
length of database: 14,973,337
effective HSP length: 89
effective length of query: 56
effective length of database: 9,403,895
effective search space: 526618120
effective search space used: 526618120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)