Query psy17183
Match_columns 145
No_of_seqs 128 out of 1200
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 23:59:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 2E-39 7E-44 251.1 14.1 137 2-145 68-204 (216)
2 3tue_A Tryparedoxin peroxidase 100.0 1.1E-38 3.9E-43 247.4 12.3 137 1-144 71-207 (219)
3 1xcc_A 1-Cys peroxiredoxin; un 100.0 1.3E-31 4.4E-36 206.7 12.8 135 2-144 47-188 (220)
4 2v2g_A Peroxiredoxin 6; oxidor 100.0 2.4E-31 8E-36 207.4 12.6 136 2-144 45-187 (233)
5 1prx_A HORF6; peroxiredoxin, h 100.0 6.4E-31 2.2E-35 203.3 14.8 136 2-144 47-191 (224)
6 3tjj_A Peroxiredoxin-4; thiore 100.0 2.5E-31 8.6E-36 209.5 11.8 137 1-144 106-242 (254)
7 3qpm_A Peroxiredoxin; oxidored 100.0 1.7E-30 5.7E-35 202.8 14.5 136 2-144 93-228 (240)
8 3a2v_A Probable peroxiredoxin; 100.0 2.4E-30 8E-35 203.8 14.6 134 2-144 49-188 (249)
9 1n8j_A AHPC, alkyl hydroperoxi 100.0 9.3E-30 3.2E-34 190.5 14.8 134 2-145 46-180 (186)
10 2pn8_A Peroxiredoxin-4; thiore 100.0 3.7E-29 1.3E-33 191.2 13.5 136 2-144 64-199 (211)
11 1uul_A Tryparedoxin peroxidase 100.0 3.4E-28 1.2E-32 183.5 14.0 136 2-144 52-187 (202)
12 2i81_A 2-Cys peroxiredoxin; st 100.0 2.2E-28 7.6E-33 187.1 12.9 135 2-144 68-202 (213)
13 1zye_A Thioredoxin-dependent p 100.0 4.5E-28 1.5E-32 186.1 12.4 137 1-144 71-207 (220)
14 1qmv_A Human thioredoxin perox 100.0 8.7E-28 3E-32 180.4 13.4 136 2-144 50-185 (197)
15 2c0d_A Thioredoxin peroxidase 100.0 5.7E-28 2E-32 186.4 12.0 136 1-144 71-206 (221)
16 3ztl_A Thioredoxin peroxidase; 99.9 3.1E-27 1.1E-31 181.4 14.3 136 2-144 85-220 (222)
17 2h01_A 2-Cys peroxiredoxin; th 99.9 8.8E-28 3E-32 179.5 10.8 136 1-144 46-181 (192)
18 1we0_A Alkyl hydroperoxide red 99.9 1.1E-25 3.7E-30 167.3 11.7 131 1-145 46-181 (187)
19 1zof_A Alkyl hydroperoxide-red 99.9 1.1E-24 3.6E-29 163.4 11.0 136 1-144 48-183 (198)
20 2bmx_A Alkyl hydroperoxidase C 99.9 7.9E-24 2.7E-28 158.5 14.0 130 1-145 60-189 (195)
21 4g2e_A Peroxiredoxin; redox pr 99.9 1.9E-22 6.3E-27 147.0 10.9 107 1-121 45-157 (157)
22 4gqc_A Thiol peroxidase, perox 99.9 4.7E-23 1.6E-27 151.6 6.0 106 2-121 49-159 (164)
23 3mng_A Peroxiredoxin-5, mitoch 99.9 8.5E-22 2.9E-26 146.8 11.2 104 2-120 59-173 (173)
24 4f82_A Thioredoxin reductase; 99.9 3.7E-21 1.3E-25 144.5 10.5 103 2-120 63-174 (176)
25 1xiy_A Peroxiredoxin, pfaop; a 99.8 1.4E-20 4.7E-25 141.8 11.6 106 2-121 59-181 (182)
26 4eo3_A Bacterioferritin comigr 99.8 6.8E-21 2.3E-25 154.4 8.9 112 2-135 40-151 (322)
27 2xhf_A Peroxiredoxin 5; oxidor 99.8 6.3E-20 2.2E-24 137.1 9.0 105 1-118 57-170 (171)
28 3uma_A Hypothetical peroxiredo 99.8 2E-19 6.7E-24 135.2 9.8 100 2-116 72-183 (184)
29 3gkn_A Bacterioferritin comigr 99.8 1.1E-18 3.8E-23 125.9 12.0 105 2-121 51-161 (163)
30 3ixr_A Bacterioferritin comigr 99.8 1E-18 3.6E-23 129.4 12.0 105 2-121 67-177 (179)
31 3drn_A Peroxiredoxin, bacterio 99.8 9.2E-19 3.1E-23 126.9 11.4 111 2-128 45-155 (161)
32 3u5r_E Uncharacterized protein 99.8 1.8E-18 6E-23 131.9 12.0 118 2-139 74-210 (218)
33 1nm3_A Protein HI0572; hybrid, 99.8 2.6E-18 8.7E-23 132.4 12.7 105 2-121 49-166 (241)
34 3keb_A Probable thiol peroxida 99.8 2.9E-18 9.8E-23 133.1 12.6 104 1-122 63-176 (224)
35 1psq_A Probable thiol peroxida 99.8 1.1E-17 3.9E-22 121.4 14.0 104 2-120 58-163 (163)
36 2pwj_A Mitochondrial peroxired 99.8 2E-18 6.9E-23 127.5 9.7 103 1-116 58-170 (171)
37 3p7x_A Probable thiol peroxida 99.8 1.1E-17 3.8E-22 121.9 13.0 103 2-120 62-166 (166)
38 1xvw_A Hypothetical protein RV 99.8 1.7E-17 5.7E-22 119.2 13.4 106 2-121 52-159 (160)
39 2ywi_A Hypothetical conserved 99.8 8.4E-18 2.9E-22 124.5 12.1 117 2-138 61-196 (196)
40 2wfc_A Peroxiredoxin 5, PRDX5; 99.7 6.5E-18 2.2E-22 124.6 10.3 105 2-121 47-160 (167)
41 1tp9_A Peroxiredoxin, PRX D (t 99.7 5.7E-18 1.9E-22 123.4 9.7 101 2-116 51-161 (162)
42 2cvb_A Probable thiol-disulfid 99.7 3.2E-17 1.1E-21 121.0 11.1 114 2-138 48-181 (188)
43 1q98_A Thiol peroxidase, TPX; 99.7 2.1E-17 7.3E-22 120.4 9.3 102 1-117 58-164 (165)
44 2yzh_A Probable thiol peroxida 99.7 1.1E-16 3.8E-21 116.9 12.6 103 2-120 63-170 (171)
45 3zrd_A Thiol peroxidase; oxido 99.7 4.4E-17 1.5E-21 123.2 10.2 103 1-118 93-200 (200)
46 2a4v_A Peroxiredoxin DOT5; yea 99.7 1.8E-16 6.2E-21 114.3 10.0 103 2-121 51-157 (159)
47 2jsy_A Probable thiol peroxida 99.6 6.6E-16 2.3E-20 111.8 8.0 105 2-121 60-166 (167)
48 1xvq_A Thiol peroxidase; thior 99.6 7.4E-15 2.5E-19 107.9 10.2 103 1-119 59-165 (175)
49 3raz_A Thioredoxin-related pro 99.6 1.4E-14 4.7E-19 103.1 11.2 100 2-125 39-143 (151)
50 3lor_A Thiol-disulfide isomera 99.6 2.4E-14 8.3E-19 102.0 12.2 96 2-121 45-154 (160)
51 3kcm_A Thioredoxin family prot 99.6 3.2E-14 1.1E-18 100.8 12.7 104 2-127 43-148 (154)
52 3eyt_A Uncharacterized protein 99.6 2.8E-14 9.5E-19 101.7 12.2 96 2-121 43-151 (158)
53 3gl3_A Putative thiol:disulfid 99.6 6.3E-14 2.2E-18 99.1 13.2 101 2-124 43-144 (152)
54 2b7k_A SCO1 protein; metalloch 99.6 1.2E-14 4.1E-19 109.2 8.8 119 2-135 57-195 (200)
55 1xzo_A BSSCO, hypothetical pro 99.5 8.8E-14 3E-18 100.5 11.6 105 1-121 48-171 (174)
56 3fw2_A Thiol-disulfide oxidore 99.5 6.7E-14 2.3E-18 99.4 10.8 92 2-120 50-146 (150)
57 4fo5_A Thioredoxin-like protei 99.5 8.4E-14 2.9E-18 98.1 10.4 91 2-119 47-142 (143)
58 1jfu_A Thiol:disulfide interch 99.5 1.9E-13 6.5E-18 100.2 11.1 103 2-121 75-179 (186)
59 2f9s_A Thiol-disulfide oxidore 99.5 4.3E-13 1.5E-17 94.9 12.1 97 2-122 41-138 (151)
60 3lwa_A Secreted thiol-disulfid 99.5 2.9E-13 9.9E-18 99.2 11.6 99 2-121 74-180 (183)
61 3erw_A Sporulation thiol-disul 99.5 6.2E-13 2.1E-17 92.5 12.0 92 2-117 49-144 (145)
62 3ewl_A Uncharacterized conserv 99.5 3.8E-13 1.3E-17 94.2 10.9 93 2-121 42-140 (142)
63 2ggt_A SCO1 protein homolog, m 99.5 3.3E-13 1.1E-17 96.5 10.7 102 2-121 39-160 (164)
64 2l5o_A Putative thioredoxin; s 99.5 7.7E-13 2.6E-17 93.5 12.3 98 1-122 42-141 (153)
65 2rli_A SCO2 protein homolog, m 99.5 9.7E-13 3.3E-17 94.7 12.4 104 1-122 41-164 (171)
66 3hdc_A Thioredoxin family prot 99.5 1.8E-13 6.2E-18 98.0 8.3 98 2-123 56-153 (158)
67 2lrn_A Thiol:disulfide interch 99.5 9.2E-13 3.1E-17 93.6 11.9 81 1-101 43-127 (152)
68 3hcz_A Possible thiol-disulfid 99.5 3.6E-13 1.2E-17 94.2 9.5 96 1-120 45-144 (148)
69 2b5x_A YKUV protein, TRXY; thi 99.4 1.8E-12 6E-17 90.5 12.5 95 2-121 44-144 (148)
70 1lu4_A Soluble secreted antige 99.4 1.8E-12 6.1E-17 89.4 12.2 95 2-120 39-134 (136)
71 2lrt_A Uncharacterized protein 99.4 1.2E-12 4.3E-17 93.6 10.9 92 2-119 50-145 (152)
72 3kh7_A Thiol:disulfide interch 99.4 1E-12 3.6E-17 96.4 10.4 80 2-105 73-154 (176)
73 2h30_A Thioredoxin, peptide me 99.4 2.1E-12 7.2E-17 92.2 11.5 97 2-122 53-156 (164)
74 3eur_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 91.9 10.1 90 2-118 46-141 (142)
75 3ia1_A THIO-disulfide isomeras 99.4 1E-12 3.5E-17 93.1 9.7 96 2-124 45-146 (154)
76 2hyx_A Protein DIPZ; thioredox 99.4 2.2E-12 7.4E-17 105.7 12.7 108 2-133 97-210 (352)
77 2k6v_A Putative cytochrome C o 99.4 4.4E-13 1.5E-17 96.5 7.7 102 2-120 51-171 (172)
78 3fkf_A Thiol-disulfide oxidore 99.4 2.9E-12 9.9E-17 89.5 11.5 94 1-121 47-145 (148)
79 3or5_A Thiol:disulfide interch 99.4 4.2E-12 1.4E-16 90.6 12.6 101 2-121 49-150 (165)
80 2vup_A Glutathione peroxidase- 99.4 9.4E-13 3.2E-17 97.6 8.9 97 1-121 62-184 (190)
81 4h86_A Peroxiredoxin type-2; o 99.4 2.2E-12 7.6E-17 98.2 10.3 93 2-105 85-183 (199)
82 2obi_A PHGPX, GPX-4, phospholi 99.4 1.2E-12 4.1E-17 96.3 7.9 101 1-120 61-182 (183)
83 2gs3_A PHGPX, GPX-4, phospholi 99.4 8.3E-13 2.8E-17 97.5 7.1 100 1-119 63-183 (185)
84 4evm_A Thioredoxin family prot 99.4 1.5E-11 5.2E-16 84.0 12.1 95 2-120 37-137 (138)
85 2p5q_A Glutathione peroxidase 99.4 2.2E-12 7.5E-17 92.6 8.1 100 1-121 46-167 (170)
86 3me7_A Putative uncharacterize 99.3 9.2E-12 3.1E-16 91.1 11.3 106 2-124 44-164 (170)
87 3ha9_A Uncharacterized thiored 99.3 1.4E-11 4.9E-16 88.3 12.1 94 1-121 51-163 (165)
88 2v1m_A Glutathione peroxidase; 99.3 4.7E-12 1.6E-16 90.8 9.3 101 1-120 45-165 (169)
89 2i3y_A Epididymal secretory gl 99.3 1.3E-11 4.4E-16 94.5 11.6 104 2-121 71-210 (215)
90 2p31_A CL683, glutathione pero 99.3 2.9E-12 9.8E-17 94.3 7.7 97 1-120 63-179 (181)
91 1zzo_A RV1677; thioredoxin fol 99.3 4.5E-11 1.6E-15 81.9 12.6 94 2-121 40-134 (136)
92 2r37_A Glutathione peroxidase 99.3 1.9E-11 6.5E-16 92.9 11.0 104 2-121 53-192 (207)
93 3dwv_A Glutathione peroxidase- 99.3 1.6E-12 5.4E-17 96.3 4.5 99 2-121 61-182 (187)
94 2ls5_A Uncharacterized protein 99.0 2.4E-13 8.3E-18 97.2 0.0 100 1-123 47-149 (159)
95 2lja_A Putative thiol-disulfid 99.3 2E-11 6.8E-16 86.1 9.7 99 2-123 45-144 (152)
96 2f8a_A Glutathione peroxidase 99.3 1E-11 3.6E-16 94.1 8.6 104 2-120 62-205 (208)
97 3cmi_A Peroxiredoxin HYR1; thi 99.3 4.8E-12 1.7E-16 91.9 6.4 94 2-120 47-166 (171)
98 2b1k_A Thiol:disulfide interch 99.3 7.2E-11 2.4E-15 84.9 11.2 90 2-119 66-157 (168)
99 3kij_A Probable glutathione pe 99.2 1.1E-11 3.8E-16 90.9 6.4 105 1-121 52-173 (180)
100 1kng_A Thiol:disulfide interch 99.2 1.5E-10 5.2E-15 81.6 11.9 92 2-120 57-150 (156)
101 1o8x_A Tryparedoxin, TRYX, TXN 99.1 6.5E-11 2.2E-15 83.4 6.4 98 2-136 43-144 (146)
102 1o73_A Tryparedoxin; electron 99.0 4.4E-10 1.5E-14 78.5 5.9 98 2-136 43-144 (144)
103 1i5g_A Tryparedoxin II; electr 99.0 6E-10 2.1E-14 78.1 6.4 81 2-101 43-127 (144)
104 4hde_A SCO1/SENC family lipopr 99.0 1.6E-08 5.4E-13 73.9 13.7 108 1-121 47-169 (170)
105 2lus_A Thioredoxion; CR-Trp16, 98.5 6.4E-11 2.2E-15 82.4 0.0 85 1-102 40-127 (143)
106 3s9f_A Tryparedoxin; thioredox 98.9 2.5E-09 8.4E-14 77.5 6.4 81 2-101 63-147 (165)
107 2ju5_A Thioredoxin disulfide i 98.3 1.1E-06 3.9E-11 62.7 5.4 86 2-121 63-151 (154)
108 2l57_A Uncharacterized protein 98.1 2.8E-05 9.5E-10 52.8 9.5 51 64-124 69-119 (126)
109 2fwh_A Thiol:disulfide interch 97.7 5.7E-05 1.9E-09 52.2 5.6 51 64-124 78-130 (134)
110 2voc_A Thioredoxin; electron t 97.3 0.0024 8.1E-08 42.2 9.1 47 64-121 58-104 (112)
111 3fk8_A Disulphide isomerase; A 97.3 0.00064 2.2E-08 46.3 6.2 52 64-121 75-132 (133)
112 2kuc_A Putative disulphide-iso 97.1 0.001 3.5E-08 44.9 6.2 48 65-122 74-121 (130)
113 2i4a_A Thioredoxin; acidophIle 97.1 0.0064 2.2E-07 39.1 9.8 47 63-120 60-106 (107)
114 2l5l_A Thioredoxin; structural 97.1 0.0048 1.6E-07 42.3 9.3 48 63-121 78-125 (136)
115 3hxs_A Thioredoxin, TRXP; elec 97.1 0.0053 1.8E-07 41.9 9.5 50 61-121 89-138 (141)
116 1thx_A Thioredoxin, thioredoxi 97.1 0.0064 2.2E-07 39.6 9.4 48 63-121 65-112 (115)
117 1nsw_A Thioredoxin, TRX; therm 97.1 0.0055 1.9E-07 39.4 9.0 47 63-120 57-103 (105)
118 2pu9_C TRX-F, thioredoxin F-ty 97.1 0.0063 2.2E-07 39.8 9.4 44 65-120 66-109 (111)
119 3emx_A Thioredoxin; structural 97.0 0.0012 3.9E-08 45.6 5.6 81 2-122 46-126 (135)
120 3f9u_A Putative exported cytoc 97.0 0.0005 1.7E-08 49.1 3.4 51 61-120 113-164 (172)
121 1dby_A Chloroplast thioredoxin 97.0 0.013 4.4E-07 37.7 10.0 47 63-120 59-105 (107)
122 2trx_A Thioredoxin; electron t 96.9 0.011 3.7E-07 38.2 9.2 47 63-120 60-106 (108)
123 1w4v_A Thioredoxin, mitochondr 96.9 0.011 3.8E-07 39.4 9.4 47 63-120 71-117 (119)
124 3die_A Thioredoxin, TRX; elect 96.8 0.018 6.3E-07 36.8 9.9 47 63-120 59-105 (106)
125 2e0q_A Thioredoxin; electron t 96.8 0.016 5.5E-07 36.7 9.2 49 61-120 53-101 (104)
126 2o8v_B Thioredoxin 1; disulfid 96.8 0.0067 2.3E-07 41.4 7.7 47 63-120 80-126 (128)
127 1t00_A Thioredoxin, TRX; redox 96.8 0.015 5E-07 37.9 9.1 47 63-120 63-109 (112)
128 3ul3_B Thioredoxin, thioredoxi 96.7 0.0062 2.1E-07 41.2 7.4 46 63-119 82-127 (128)
129 1faa_A Thioredoxin F; electron 96.7 0.013 4.4E-07 39.0 8.9 45 65-121 79-123 (124)
130 2yzu_A Thioredoxin; redox prot 96.7 0.022 7.5E-07 36.4 9.7 48 63-121 58-105 (109)
131 3qfa_C Thioredoxin; protein-pr 96.7 0.02 6.8E-07 38.0 9.5 48 61-120 68-115 (116)
132 2f51_A Thioredoxin; electron t 96.6 0.0094 3.2E-07 39.9 7.5 51 63-124 62-115 (118)
133 2ppt_A Thioredoxin-2; thiredox 96.6 0.02 6.9E-07 40.4 9.6 48 63-121 104-151 (155)
134 1x5e_A Thioredoxin domain cont 96.6 0.015 5.2E-07 38.9 8.5 48 63-122 63-110 (126)
135 3tco_A Thioredoxin (TRXA-1); d 96.6 0.027 9.2E-07 36.0 9.4 49 61-120 59-107 (109)
136 1ep7_A Thioredoxin CH1, H-type 96.6 0.026 8.9E-07 36.5 9.4 46 63-120 64-109 (112)
137 3d22_A TRXH4, thioredoxin H-ty 96.6 0.018 6.1E-07 39.2 8.9 49 61-121 83-131 (139)
138 4euy_A Uncharacterized protein 96.6 0.017 5.9E-07 37.4 8.4 49 61-120 55-103 (105)
139 3d6i_A Monothiol glutaredoxin- 96.6 0.016 5.3E-07 37.8 8.2 46 63-120 62-107 (112)
140 1xfl_A Thioredoxin H1; AT3G510 96.6 0.02 7E-07 38.6 9.0 48 61-120 75-122 (124)
141 2j23_A Thioredoxin; immune pro 96.5 0.012 4.2E-07 39.4 7.7 46 63-120 74-119 (121)
142 2es7_A Q8ZP25_salty, putative 96.5 0.0026 8.8E-08 45.0 4.3 48 63-121 77-124 (142)
143 3hz4_A Thioredoxin; NYSGXRC, P 96.5 0.013 4.6E-07 40.2 7.9 66 63-139 64-131 (140)
144 1x5d_A Protein disulfide-isome 96.5 0.024 8.1E-07 37.9 8.9 48 63-121 69-116 (133)
145 1fb6_A Thioredoxin M; electron 96.4 0.049 1.7E-06 34.6 9.5 49 61-120 56-104 (105)
146 3f3q_A Thioredoxin-1; His TAG, 96.3 0.037 1.2E-06 36.2 8.6 48 61-120 61-108 (109)
147 2oe3_A Thioredoxin-3; electron 96.3 0.041 1.4E-06 36.5 9.0 45 63-119 69-113 (114)
148 3p2a_A Thioredoxin 2, putative 96.2 0.039 1.3E-06 38.0 9.1 48 63-121 95-142 (148)
149 1syr_A Thioredoxin; SGPP, stru 96.2 0.037 1.2E-06 36.2 8.4 46 63-120 65-110 (112)
150 2vlu_A Thioredoxin, thioredoxi 96.2 0.048 1.6E-06 36.0 9.0 48 62-121 72-119 (122)
151 2wz9_A Glutaredoxin-3; protein 96.2 0.048 1.6E-06 38.0 9.3 49 63-123 71-119 (153)
152 1v98_A Thioredoxin; oxidoreduc 96.2 0.053 1.8E-06 36.9 9.4 50 61-121 88-137 (140)
153 3gix_A Thioredoxin-like protei 96.1 0.024 8.1E-07 39.8 7.4 49 63-121 63-120 (149)
154 3gnj_A Thioredoxin domain prot 96.1 0.063 2.1E-06 34.5 9.0 49 61-120 60-108 (111)
155 2dml_A Protein disulfide-isome 96.0 0.034 1.1E-06 37.2 7.7 48 63-120 75-122 (130)
156 3uvt_A Thioredoxin domain-cont 96.0 0.073 2.5E-06 34.1 9.0 46 63-119 64-109 (111)
157 2i1u_A Thioredoxin, TRX, MPT46 95.9 0.077 2.6E-06 34.7 9.1 48 63-121 70-117 (121)
158 1sen_A Thioredoxin-like protei 95.9 0.0015 5.3E-08 46.8 0.5 50 69-122 93-148 (164)
159 2xc2_A Thioredoxinn; oxidoredu 95.9 0.076 2.6E-06 34.8 9.0 46 63-120 71-116 (117)
160 3cxg_A Putative thioredoxin; m 95.9 0.041 1.4E-06 37.5 7.9 48 63-121 78-128 (133)
161 3m9j_A Thioredoxin; oxidoreduc 95.8 0.098 3.4E-06 33.2 9.0 48 61-120 57-104 (105)
162 2vm1_A Thioredoxin, thioredoxi 95.8 0.097 3.3E-06 34.0 9.1 49 61-121 65-113 (118)
163 1xwb_A Thioredoxin; dimerizati 95.8 0.13 4.3E-06 32.6 9.5 48 61-120 58-105 (106)
164 2vim_A Thioredoxin, TRX; thior 95.7 0.13 4.5E-06 32.4 9.3 47 62-120 57-103 (104)
165 1r26_A Thioredoxin; redox-acti 95.7 0.095 3.2E-06 35.4 8.9 48 61-120 74-121 (125)
166 1gh2_A Thioredoxin-like protei 95.7 0.1 3.5E-06 33.5 8.6 46 63-120 60-105 (107)
167 1ti3_A Thioredoxin H, PTTRXH1; 95.5 0.09 3.1E-06 33.8 8.0 48 61-120 63-110 (113)
168 2dj1_A Protein disulfide-isome 95.4 0.048 1.6E-06 36.9 6.4 47 64-122 78-124 (140)
169 2l6c_A Thioredoxin; oxidoreduc 95.4 0.039 1.3E-06 36.1 5.8 48 63-121 58-105 (110)
170 3aps_A DNAJ homolog subfamily 95.4 0.038 1.3E-06 36.4 5.8 52 63-121 61-112 (122)
171 1oaz_A Thioredoxin 1; immune s 95.3 0.023 7.8E-07 38.4 4.5 47 63-120 75-121 (123)
172 3apq_A DNAJ homolog subfamily 95.3 0.071 2.4E-06 39.1 7.6 48 63-121 154-201 (210)
173 1qgv_A Spliceosomal protein U5 95.3 0.085 2.9E-06 36.6 7.6 65 63-134 63-136 (142)
174 3dxb_A Thioredoxin N-terminall 95.2 0.13 4.4E-06 38.1 8.9 49 63-122 70-118 (222)
175 3t58_A Sulfhydryl oxidase 1; o 95.2 0.13 4.3E-06 43.7 9.8 46 66-121 78-126 (519)
176 1zma_A Bacterocin transport ac 95.1 0.076 2.6E-06 34.9 6.5 41 67-118 77-117 (118)
177 3zzx_A Thioredoxin; oxidoreduc 95.0 0.057 1.9E-06 35.7 5.7 47 61-119 57-103 (105)
178 3qou_A Protein YBBN; thioredox 94.9 0.11 3.8E-06 39.5 7.9 48 63-121 66-113 (287)
179 2qsi_A Putative hydrogenase ex 94.3 0.073 2.5E-06 37.7 5.2 50 61-121 73-122 (137)
180 3h79_A Thioredoxin-like protei 94.2 0.28 9.5E-06 32.6 7.8 48 63-120 78-126 (127)
181 2qgv_A Hydrogenase-1 operon pr 94.2 0.061 2.1E-06 38.3 4.5 50 61-121 75-124 (140)
182 2dj0_A Thioredoxin-related tra 94.1 0.23 7.8E-06 33.6 7.2 40 65-105 69-108 (137)
183 3ira_A Conserved protein; meth 94.0 0.16 5.6E-06 37.0 6.7 53 61-119 80-144 (173)
184 1a8l_A Protein disulfide oxido 93.7 0.43 1.5E-05 34.7 8.6 47 63-120 178-224 (226)
185 2dbc_A PDCL2, unnamed protein 93.3 0.55 1.9E-05 31.9 8.1 45 71-122 74-121 (135)
186 1z6n_A Hypothetical protein PA 93.3 0.32 1.1E-05 35.0 7.1 18 83-100 110-127 (167)
187 2lst_A Thioredoxin; structural 92.2 0.017 5.9E-07 38.7 0.0 47 65-121 66-115 (130)
188 3idv_A Protein disulfide-isome 93.0 0.44 1.5E-05 34.8 7.8 47 63-121 75-121 (241)
189 1wou_A Thioredoxin -related pr 92.6 0.24 8.3E-06 33.0 5.3 76 2-118 46-121 (123)
190 1fo5_A Thioredoxin; disulfide 91.8 0.27 9.3E-06 29.8 4.5 67 2-119 17-83 (85)
191 2yj7_A LPBCA thioredoxin; oxid 90.8 0.035 1.2E-06 35.1 0.0 47 62-119 58-104 (106)
192 3ed3_A Protein disulfide-isome 91.4 1.1 3.8E-05 34.8 8.7 50 65-121 79-141 (298)
193 2djj_A PDI, protein disulfide- 91.3 0.45 1.5E-05 30.9 5.5 35 83-121 81-116 (121)
194 3q6o_A Sulfhydryl oxidase 1; p 91.2 0.92 3.1E-05 33.7 7.7 50 64-121 76-126 (244)
195 3ph9_A Anterior gradient prote 90.8 0.061 2.1E-06 38.3 0.7 55 60-120 82-143 (151)
196 1mek_A Protein disulfide isome 90.7 0.15 5.2E-06 32.8 2.6 48 63-121 67-116 (120)
197 1sji_A Calsequestrin 2, calseq 90.2 1.1 3.9E-05 35.1 7.8 47 63-121 75-121 (350)
198 2dlx_A UBX domain-containing p 90.2 0.62 2.1E-05 33.1 5.6 56 66-132 90-148 (153)
199 1nho_A Probable thioredoxin; b 90.0 0.37 1.3E-05 29.2 3.8 39 67-120 45-83 (85)
200 2dj3_A Protein disulfide-isome 89.4 0.39 1.3E-05 31.8 3.9 44 70-122 74-118 (133)
201 3q6o_A Sulfhydryl oxidase 1; p 88.9 2.4 8.2E-05 31.3 8.4 54 58-121 186-239 (244)
202 3idv_A Protein disulfide-isome 88.8 1.7 5.9E-05 31.5 7.4 47 63-121 190-236 (241)
203 2hls_A Protein disulfide oxido 88.2 3.8 0.00013 30.6 9.2 43 64-121 183-225 (243)
204 2b5e_A Protein disulfide-isome 87.6 2 6.9E-05 35.3 7.8 48 63-121 72-121 (504)
205 2r2j_A Thioredoxin domain-cont 86.8 3.2 0.00011 33.0 8.4 48 63-121 68-116 (382)
206 3apo_A DNAJ homolog subfamily 86.5 0.99 3.4E-05 39.3 5.6 52 63-121 715-766 (780)
207 3dml_A Putative uncharacterize 86.3 0.56 1.9E-05 32.0 3.1 43 67-120 66-108 (116)
208 3apo_A DNAJ homolog subfamily 86.0 3.7 0.00013 35.7 8.9 45 65-121 497-541 (780)
209 3f8u_A Protein disulfide-isome 85.8 1.6 5.6E-05 35.6 6.3 44 69-122 417-461 (481)
210 1v58_A Thiol:disulfide interch 85.0 0.96 3.3E-05 34.0 4.2 49 64-123 186-234 (241)
211 1eej_A Thiol:disulfide interch 84.5 1.8 6.2E-05 31.8 5.5 47 60-121 164-210 (216)
212 1ilo_A Conserved hypothetical 84.4 4.5 0.00015 23.7 6.8 38 66-117 39-76 (77)
213 2znm_A Thiol:disulfide interch 84.3 1.8 6E-05 30.8 5.2 41 65-120 138-178 (195)
214 3f8u_A Protein disulfide-isome 84.3 3.6 0.00012 33.5 7.6 50 61-121 59-108 (481)
215 3gyk_A 27KDA outer membrane pr 84.0 3.3 0.00011 28.8 6.4 41 64-120 131-171 (175)
216 1a0r_P Phosducin, MEKA, PP33; 83.7 2 7E-05 32.7 5.6 49 69-124 177-228 (245)
217 1wmj_A Thioredoxin H-type; str 82.7 0.26 8.8E-06 32.5 0.1 47 63-121 75-121 (130)
218 3t58_A Sulfhydryl oxidase 1; o 82.5 5.1 0.00017 33.8 8.0 57 58-124 186-242 (519)
219 2av4_A Thioredoxin-like protei 80.3 1 3.5E-05 32.6 2.6 66 61-136 79-156 (160)
220 1ttz_A Conserved hypothetical 78.5 5.2 0.00018 25.3 5.4 48 63-126 34-81 (87)
221 2trc_P Phosducin, MEKA, PP33; 74.6 8.1 0.00028 28.5 6.2 49 66-121 161-212 (217)
222 3ga4_A Dolichyl-diphosphooligo 74.3 6.1 0.00021 28.7 5.4 70 61-137 87-167 (178)
223 3uem_A Protein disulfide-isome 73.8 6.8 0.00023 30.4 5.9 49 63-121 307-356 (361)
224 3qcp_A QSOX from trypanosoma b 72.8 5.8 0.0002 33.3 5.5 23 66-94 93-115 (470)
225 2rem_A Disulfide oxidoreductas 72.1 19 0.00066 25.0 7.6 40 66-121 144-183 (193)
226 3kp8_A Vkorc1/thioredoxin doma 71.4 7.8 0.00027 25.1 4.9 37 65-117 54-90 (106)
227 3iv4_A Putative oxidoreductase 69.7 8.3 0.00028 26.0 4.8 50 59-117 58-111 (112)
228 2ywm_A Glutaredoxin-like prote 69.2 4.6 0.00016 29.2 3.7 44 63-120 175-218 (229)
229 3h93_A Thiol:disulfide interch 68.4 19 0.00064 25.2 6.8 26 2-30 40-65 (192)
230 2k9k_A TONB2; metal transport; 64.9 25 0.00085 22.6 7.1 41 83-123 41-82 (106)
231 2qc7_A ERP31, ERP28, endoplasm 63.7 36 0.0012 25.5 7.9 46 66-120 70-117 (240)
232 4fu0_A D-alanine--D-alanine li 63.1 23 0.00078 27.8 7.0 55 68-127 285-353 (357)
233 3hd5_A Thiol:disulfide interch 61.9 16 0.00053 25.7 5.3 27 2-31 40-66 (195)
234 3rri_A Glyoxalase/bleomycin re 61.8 21 0.00073 22.9 5.7 61 23-102 68-128 (135)
235 3noy_A 4-hydroxy-3-methylbut-2 60.8 18 0.0006 29.5 5.9 55 3-70 42-98 (366)
236 2vgl_S AP-2 complex subunit si 60.7 7.5 0.00026 26.8 3.3 19 85-103 3-21 (142)
237 3evi_A Phosducin-like protein 60.3 11 0.00036 25.1 3.9 44 70-120 66-112 (118)
238 1u07_A TONB protein; beta-hair 60.3 18 0.00061 22.6 4.9 50 70-124 18-68 (90)
239 3us3_A Calsequestrin-1; calciu 59.5 10 0.00035 30.0 4.3 46 63-120 77-122 (367)
240 3ihg_A RDME; flavoenzyme, anth 58.5 11 0.00039 31.0 4.6 50 62-120 483-532 (535)
241 2k8s_A Thioredoxin; dimer, str 57.4 16 0.00055 21.7 4.1 25 66-99 44-68 (80)
242 2djk_A PDI, protein disulfide- 57.4 6.4 0.00022 26.2 2.4 51 63-122 62-115 (133)
243 1w63_Q Adapter-related protein 57.2 9.9 0.00034 26.8 3.5 20 85-104 3-22 (158)
244 4g9p_A 4-hydroxy-3-methylbut-2 54.9 15 0.00053 30.3 4.7 41 17-66 46-89 (406)
245 2ywm_A Glutaredoxin-like prote 54.8 13 0.00043 26.8 3.8 34 63-103 67-100 (229)
246 2zd7_A VPS75, vacuolar protein 53.1 3.7 0.00013 31.8 0.7 18 126-143 140-157 (264)
247 3sk2_A EHPR; antibiotic resist 52.5 43 0.0015 21.4 6.2 56 22-101 72-130 (132)
248 4gym_A Glyoxalase/bleomycin re 51.5 48 0.0017 21.7 6.7 55 25-103 80-134 (149)
249 3ghf_A Septum site-determining 50.1 21 0.00071 24.1 4.1 27 16-42 68-94 (120)
250 3gv1_A Disulfide interchange p 48.8 13 0.00043 25.8 2.9 44 63-121 95-138 (147)
251 3ct8_A Protein BH2160, putativ 47.1 59 0.002 21.4 6.3 59 21-99 85-143 (146)
252 3kgk_A Arsenical resistance op 46.9 32 0.0011 23.2 4.5 37 67-117 62-98 (110)
253 2e7p_A Glutaredoxin; thioredox 46.3 52 0.0018 20.5 7.9 25 67-100 63-87 (116)
254 1t3b_A Thiol:disulfide interch 46.1 21 0.0007 25.9 3.8 44 63-121 167-210 (211)
255 2grx_C Protein TONB; beta barr 45.9 36 0.0012 25.7 5.2 41 84-124 166-207 (229)
256 2b5e_A Protein disulfide-isome 45.4 24 0.00083 28.7 4.5 34 83-121 431-466 (504)
257 3fhk_A UPF0403 protein YPHP; d 44.5 77 0.0026 22.4 6.3 60 59-119 82-141 (147)
258 3uem_A Protein disulfide-isome 43.4 1.1E+02 0.0037 23.4 10.1 80 19-121 33-115 (361)
259 4dvc_A Thiol:disulfide interch 43.1 24 0.00081 24.1 3.6 41 68-121 141-181 (184)
260 2e50_A Protein SET; histone ch 43.0 7.3 0.00025 29.5 0.9 16 126-141 152-167 (225)
261 3e5d_A Putative glyoxalase I; 42.5 59 0.002 20.1 7.1 55 22-99 71-125 (127)
262 2rbb_A Glyoxalase/bleomycin re 42.5 66 0.0023 20.7 6.0 55 25-102 78-132 (141)
263 3ktb_A Arsenical resistance op 41.3 31 0.0011 23.1 3.7 27 83-117 75-101 (106)
264 4hi4_A Aerotaxis transducer AE 39.7 19 0.00065 22.6 2.5 16 86-101 17-32 (121)
265 2rk0_A Glyoxalase/bleomycin re 39.6 72 0.0025 20.3 5.9 57 21-102 71-127 (136)
266 3a0s_A Sensor protein; PAS-fol 39.5 20 0.00069 19.9 2.4 16 86-101 4-19 (96)
267 2ec4_A FAS-associated factor 1 39.5 1E+02 0.0034 21.9 8.7 37 73-119 126-165 (178)
268 3lm4_A Catechol 2,3-dioxygenas 39.3 98 0.0033 23.7 7.0 58 21-102 66-123 (339)
269 2a4x_A Mitomycin-binding prote 38.2 78 0.0027 20.2 7.7 60 21-103 70-129 (138)
270 3b33_A Sensor protein; structu 37.2 26 0.00088 21.2 2.7 16 86-101 19-34 (115)
271 2v2f_A Penicillin binding prot 37.2 16 0.00055 17.6 1.4 16 85-100 5-20 (26)
272 2ayu_A Nucleosome assembly pro 36.9 8.3 0.00028 31.9 0.4 16 125-140 267-283 (417)
273 3cwf_A Alkaline phosphatase sy 36.4 18 0.0006 23.5 1.9 15 86-100 50-64 (122)
274 3r4q_A Lactoylglutathione lyas 36.1 95 0.0032 20.6 6.8 58 22-103 76-133 (160)
275 3fs3_A Nucleosome assembly pro 35.5 11 0.00039 30.6 0.9 15 126-140 194-208 (359)
276 2l3i_A Aoxki4A, antimicrobial 35.0 15 0.00052 18.5 1.0 10 127-136 1-10 (30)
277 2in3_A Hypothetical protein; D 34.6 61 0.0021 22.8 4.8 44 67-121 166-209 (216)
278 1lr0_A TOLA protein; domain-sw 34.5 60 0.0021 22.0 4.5 39 84-122 54-93 (129)
279 3bqx_A Glyoxalase-related enzy 34.0 86 0.003 20.4 5.3 18 85-102 109-126 (150)
280 1f9z_A Glyoxalase I; beta-alph 33.4 88 0.003 19.5 6.8 17 85-101 109-125 (135)
281 3fg8_A Uncharacterized protein 32.4 33 0.0011 21.2 2.7 16 86-101 24-39 (118)
282 3kyp_A Pfnaps, nucleosome asse 31.5 19 0.00067 26.3 1.6 15 127-141 124-138 (193)
283 2kjz_A ATC0852; protein of unk 31.4 83 0.0028 20.6 4.8 55 22-100 86-140 (144)
284 3olo_A Two-component sensor hi 31.1 36 0.0012 20.2 2.7 16 86-101 25-40 (118)
285 3f4s_A Alpha-DSBA1, putative u 30.3 53 0.0018 24.1 3.9 45 68-121 161-210 (226)
286 3hpy_A Catechol 2,3-dioxygenas 30.0 1.7E+02 0.0058 21.7 7.1 60 22-103 65-124 (309)
287 1hyu_A AHPF, alkyl hydroperoxi 29.9 73 0.0025 26.2 5.0 44 63-121 156-199 (521)
288 2gj3_A Nitrogen fixation regul 29.9 39 0.0013 20.7 2.7 16 86-101 17-32 (120)
289 3fc7_A HTR-like protein, senso 29.6 34 0.0012 20.6 2.4 16 86-101 31-46 (125)
290 3mfx_A Sensory BOX/ggdef famil 29.3 33 0.0011 22.5 2.4 18 85-102 18-35 (129)
291 3kzq_A Putative uncharacterize 29.1 43 0.0015 23.8 3.1 43 68-121 160-202 (208)
292 3bj5_A Protein disulfide-isome 28.9 1.4E+02 0.0046 20.2 6.5 64 67-137 78-146 (147)
293 2c0g_A ERP29 homolog, windbeut 28.8 1E+02 0.0034 23.2 5.3 48 66-121 82-131 (248)
294 2vv6_A FIXL, sensor protein FI 28.4 37 0.0013 20.7 2.4 16 86-101 5-20 (119)
295 2obb_A Hypothetical protein; s 28.3 77 0.0026 21.8 4.2 44 8-65 28-74 (142)
296 3ikl_A DNA polymerase subunit 28.3 59 0.002 27.1 4.2 88 21-123 349-449 (459)
297 1ll8_A PAS kinase; PAS domain, 27.7 40 0.0014 20.4 2.5 16 86-101 10-26 (114)
298 2r78_A Sensor protein; sensory 27.7 44 0.0015 20.6 2.7 16 86-101 23-38 (117)
299 1l6r_A Hypothetical protein TA 27.0 1.3E+02 0.0043 21.6 5.5 32 9-42 27-58 (227)
300 3u3g_D Ribonuclease H, RNAse H 26.7 46 0.0016 21.7 2.8 41 86-126 22-63 (140)
301 3bci_A Disulfide bond protein 26.3 57 0.0019 22.5 3.3 31 84-124 150-180 (186)
302 2qkp_A Uncharacterized protein 25.9 41 0.0014 22.9 2.4 17 86-102 31-47 (151)
303 2vgl_M AP-2 complex subunit MU 25.7 1.3E+02 0.0046 24.2 5.9 20 85-104 3-22 (435)
304 2zyq_A Probable biphenyl-2,3-D 25.1 2E+02 0.0069 21.0 8.7 61 22-102 60-120 (300)
305 3mxq_A Sensor protein; PSI2, M 25.0 43 0.0015 22.9 2.4 16 86-101 34-49 (152)
306 3bwl_A Sensor protein; structu 24.9 54 0.0019 19.9 2.7 16 86-101 29-44 (126)
307 1kw3_B 2,3-dihydroxybiphenyl d 24.7 2E+02 0.007 20.9 8.5 61 22-102 58-118 (292)
308 4ann_A ESSB; membrane protein, 24.3 43 0.0015 25.0 2.4 39 83-121 105-147 (215)
309 3feu_A Putative lipoprotein; a 23.9 75 0.0026 22.2 3.6 39 69-120 144-182 (185)
310 1d06_A Nitrogen fixation regul 23.9 49 0.0017 20.6 2.4 16 86-101 28-43 (130)
311 2ehz_A 1,2-dihydroxynaphthalen 23.6 2.2E+02 0.0076 20.9 7.8 61 22-102 64-124 (302)
312 3ghj_A Putative integron gene 23.3 1.6E+02 0.0053 19.0 6.0 17 84-100 123-139 (141)
313 1xty_A PTH, peptidyl-tRNA hydr 23.0 1.7E+02 0.0059 19.4 5.6 39 19-66 50-88 (120)
314 3fcd_A Lyase, ORF125EGC139; la 22.8 1.2E+02 0.004 19.4 4.2 21 84-104 106-126 (134)
315 3luq_A Sensor protein; PAS, hi 22.8 57 0.002 18.9 2.5 16 86-101 15-30 (114)
316 3kp9_A Vkorc1/thioredoxin doma 22.3 91 0.0031 24.2 4.0 37 66-118 240-276 (291)
317 1nwz_A PYP, photoactive yellow 22.0 51 0.0017 22.4 2.2 29 86-114 29-58 (125)
318 3mjq_A Uncharacterized protein 21.9 58 0.002 19.4 2.4 16 86-101 11-26 (126)
319 4as2_A Phosphorylcholine phosp 21.7 59 0.002 25.5 2.9 34 7-42 146-179 (327)
320 2r47_A Uncharacterized protein 21.6 79 0.0027 22.6 3.2 43 8-66 105-147 (157)
321 4gxt_A A conserved functionall 21.6 71 0.0024 25.6 3.4 35 6-42 223-257 (385)
322 2lqo_A Putative glutaredoxin R 21.5 1.6E+02 0.0053 18.4 8.1 29 83-121 55-83 (92)
323 2j58_A WZA, outer membrane lip 21.5 34 0.0011 27.4 1.4 33 87-119 97-130 (359)
324 3vol_A Aerotaxis transducer AE 21.5 53 0.0018 23.8 2.4 17 85-101 33-49 (233)
325 3lyx_A Sensory BOX/ggdef domai 21.2 65 0.0022 18.5 2.5 16 86-101 19-34 (124)
326 1rzw_A Protein AF2095(GR4); be 20.3 1.7E+02 0.0058 19.7 4.6 40 18-66 43-82 (123)
327 1mzu_A PPR; photoactive yellow 20.3 58 0.002 22.3 2.2 29 86-114 34-63 (129)
328 1xqa_A Glyoxalase/bleomycin re 20.3 1.5E+02 0.0052 17.8 6.6 15 85-99 97-111 (113)
329 3k3p_A D-alanine--D-alanine li 20.1 2.8E+02 0.0096 21.9 6.7 23 84-106 320-342 (383)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-39 Score=251.09 Aligned_cols=137 Identities=33% Similarity=0.557 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
||.|+|.|++.+ ++|+++|++|||||.|++++|++|+++.+..+ |+..+ +||+|+|++++++++||+..+..|
T Consensus 68 Ct~E~~~f~~~~--~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~--~~~~l---~fpllsD~~~~vak~YGv~~~~~g 140 (216)
T 3sbc_A 68 SPTEIIAFSEAA--KKFEEQGAQVLFASTDSEYSLLAWTNIPRKEG--GLGPI---NIPLLADTNHSLSRDYGVLIEEEG 140 (216)
T ss_dssp HHHHHHHHHHHH--HHHHHTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCSC---SSCEEECTTSHHHHHHTCEETTTT
T ss_pred CchhhhHHHHhH--HhhccCCceEEEeecCchhhHHHHHHHHHHhC--CccCc---ccceEeCCCCHHHHHcCCeeccCC
Confidence 999999999999 69999999999999999999999998755444 55558 999999999999999999988789
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccCC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVAL 145 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~~ 145 (145)
++.|++||||++|+|++..+++.+++|+++|+|++|++||++++|+++||+||++|+++|+|++
T Consensus 141 ~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ~~~~~~~~~Pa~W~~G~~~i~p~~ 204 (216)
T 3sbc_A 141 VALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATIKPTV 204 (216)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCCTTSCCBCCST
T ss_pred ceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhhhHhhcCCCcCCCCCCCCceecCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999974
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=1.1e-38 Score=247.36 Aligned_cols=137 Identities=34% Similarity=0.594 Sum_probs=109.6
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.||.|+|.|++++ ++|+++|++|||||+|++++|++|+++..+.. ++..+ +||||+|++++|+++||+..+..
T Consensus 71 vCt~E~~~f~~~~--~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~--~~~~l---~fpllsD~~~~va~~yGv~~~~~ 143 (219)
T 3tue_A 71 VCPTEVIAFSDSV--SRFNELNCEVLACSIDSEYAHLQWTLQDRKKG--GLGTM---AIPILADKTKNIARSYGVLEESQ 143 (219)
T ss_dssp SCCHHHHHHHTTH--HHHHTTTEEEEEEESSCHHHHHHHHHSCGGGT--CCCSC---SSCEEECTTSHHHHHTTCEETTT
T ss_pred CCchhHhhHHHHH--hhhccCCcEEEEeeCCchhhHHHHhhhhHHhc--Ccccc---ccccccCcccHHHHHcCCcccCC
Confidence 4999999999999 79999999999999999999999998643333 34448 99999999999999999998878
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|++.|++||||++|+|+++++++.+++|+++|+|+.|++||++++|+++||+||++|+++|+|+
T Consensus 144 g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ~~~~~~~~~Pa~W~~G~~~i~p~ 207 (219)
T 3tue_A 144 GVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHGEVCPANWKKGDPGMKPE 207 (219)
T ss_dssp TEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHC------------------
T ss_pred CeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhhhHHhcCCCcCCCCCCCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999974
No 3
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.97 E-value=1.3e-31 Score=206.72 Aligned_cols=135 Identities=21% Similarity=0.341 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhc-CCCCCCCCCCCCccEEecCchHHHHHhCCCccC-
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTAT-SSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS- 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~- 79 (145)
|+.|++.|++++ ++|+++|++|||||.|+.+++++|.+.+++. . + ..+ +||+++|.+++++++||+....
T Consensus 47 C~~el~~l~~l~--~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~--~-~~~---~fpil~D~~~~va~~ygv~~~~~ 118 (220)
T 1xcc_A 47 CTTELAELGKMH--EDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGK--L-NKW---EIPIVCDESRELANKLKIMDEQE 118 (220)
T ss_dssp HHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHT--C-SCC---CCCEEECTTSHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHH--HHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhc--C-CCC---cceeEECchhHHHHHhCCCCccc
Confidence 999999999999 6999999999999999999999999876543 1 0 128 9999999999999999996431
Q ss_pred ---CC--CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 80 ---AG--HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 80 ---~g--~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
.| .+.|++||||++|+|++.+.++.+.+++.+|+++.|++||.+++|+.+||+||++|+++|+|+
T Consensus 119 ~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq~~~~~~~~~p~~w~~g~~~~~~p 188 (220)
T 1xcc_A 119 KDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCCVIP 188 (220)
T ss_dssp ECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSSEEBCTTCCTTSCEEECT
T ss_pred ccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhhcCCcccCCCcCcCCceEeCC
Confidence 12 358999999999999999999888889999999999999999999999999999999999853
No 4
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.97 E-value=2.4e-31 Score=207.39 Aligned_cols=136 Identities=24% Similarity=0.378 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCC-CCCCCCccEEecCchHHHHHhCCCccC-
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSA-IDPSKIVPLLSDSTHAISKTYGCYLSS- 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~fpllsD~~~~va~~yg~~~~~- 79 (145)
|+.|++.|++++ ++|+++|++|||||.|+.+++++|++.+++.. +.. .+ +||+++|.+++++++||+....
T Consensus 45 C~~el~~l~~l~--~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~--~~~~~~---~fpil~D~~~~va~~ygv~~~~~ 117 (233)
T 2v2g_A 45 STTELGRVIQLE--GDFKKRGVKLIALSCDNVADHKEWSEDVKCLS--GVKGDM---PYPIIADETRELAVKLGMVDPDE 117 (233)
T ss_dssp HHHHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHHHHHHHH--TCCSSC---SSCEEECTTCHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHH--HHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhh--CcccCC---ceEEEECChHHHHHHhCCcCccc
Confidence 999999999999 69999999999999999999999999765321 110 18 9999999999999999997431
Q ss_pred ---CC--CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 80 ---AG--HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 80 ---~g--~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
.| .+.|++||||++|+|++.++++.+.+++.+|+++.|++||.+++|+.+||+||++|+++|+|+
T Consensus 118 ~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq~~~~~~~~~p~~W~~g~~~~~~p 187 (233)
T 2v2g_A 118 RTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQLTAQKKVATPADWQPGDRCMVVP 187 (233)
T ss_dssp ECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSSEEBCTTCCTTSCEEECT
T ss_pred ccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhccCCccCCCCcCcCCceEeCC
Confidence 12 368999999999999999999888899999999999999999999999999999999999854
No 5
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.97 E-value=6.4e-31 Score=203.28 Aligned_cols=136 Identities=24% Similarity=0.362 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCC---CCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRS---AIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
|+.|++.|++++ ++|+++|++|||||.|+.+++++|.+.+++.. ++ ..+ +||+++|.+++++++||+...
T Consensus 47 C~~el~~l~~l~--~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~--~~~~~~~~---~fpil~D~~~~va~~ygv~~~ 119 (224)
T 1prx_A 47 CTTELGRAAKLA--PEFAKRNVKLIALSIDSVEDHLAWSKDINAYN--SEEPTEKL---PFPIIDDRNRELAILLGMLDP 119 (224)
T ss_dssp HHHHHHHHHHHH--HHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSCCCSCC---SSCEEECTTCHHHHHTTSSCS
T ss_pred cHHHHHHHHHHH--HHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhh--CcccccCc---CcceeecCchHHHHHhCCCCc
Confidence 999999999999 69999999999999999999999999876542 21 128 999999999999999999753
Q ss_pred C----C--CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 79 S----A--GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 79 ~----~--g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
. . +.+.|++||||++|+|++.+.++...+++.+|+++.|++||.+++|+.+||+||++|+++|+|+
T Consensus 120 ~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~~~~~~~~~~p~~W~~g~~~~~~p 191 (224)
T 1prx_A 120 AEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLP 191 (224)
T ss_dssp CTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHHHHHHHCEEBCTTCCTTSCEEECT
T ss_pred ccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhccCCcCCCCCCCCCCceEeCC
Confidence 1 1 2468999999999999999999888889999999999999999999999999999999999853
No 6
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.97 E-value=2.5e-31 Score=209.47 Aligned_cols=137 Identities=36% Similarity=0.597 Sum_probs=108.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|+.|++.|++++ ++|+++|++||+||.|+.+.+++|++..++.. |+..+ +||+++|.++++++.||+.....
T Consensus 106 ~C~~el~~l~~l~--~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~--g~~~~---~fp~l~D~~~~va~~ygv~~~~~ 178 (254)
T 3tjj_A 106 VCPTEIIAFGDRL--EEFRSINTEVVACSVDSQFTHLAWINTPRRQG--GLGPI---RIPLLSDLTHQISKDYGVYLEDS 178 (254)
T ss_dssp SCCHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHTSCGGGT--SCCSC---SSCEEECTTSHHHHHHTCEETTT
T ss_pred chHHHHHHHHHHH--HHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhc--CCccc---ccceeeCcHHHHHHHcCCccccC
Confidence 4999999999999 69999999999999999999999998754443 33338 99999999999999999987666
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|...|++||||++|+|++.++++.+.+++.+++++.|+++|++++|+++||+||++|+++|+|+
T Consensus 179 g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq~~~~~~~~cp~~W~~g~~~~~~~ 242 (254)
T 3tjj_A 179 GHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSETIIPD 242 (254)
T ss_dssp TEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHC-----------------
T ss_pred CCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhccccccCccccCCCCCCCceeccC
Confidence 7778999999999999999999888899999999999999999999999999999999999975
No 7
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.97 E-value=1.7e-30 Score=202.78 Aligned_cols=136 Identities=38% Similarity=0.621 Sum_probs=123.4
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|+++|++||+||.|+.+.+++|++..++.. ++..+ +||+++|.+++++++||+.....|
T Consensus 93 C~~el~~l~~l~--~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~--~~~~~---~fp~l~D~~~~v~~~ygv~~~~~g 165 (240)
T 3qpm_A 93 CPTEIIAFSDRV--HEFRAINTEVVACSVDSQFTHLAWIITPRKQG--GLGPM---KIPLLSDLTHQISKDYGVYLEDQG 165 (240)
T ss_dssp HHHHHHHHHHHH--HHHHTTTEEEEEEESSCHHHHHHHHHSCGGGT--CCCSC---SSCEEECTTSHHHHHTTCEETTTT
T ss_pred hHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHHHHhhc--CCCCC---ceeEEeCchHHHHHHhCCccccCC
Confidence 999999999999 69999999999999999999999998744432 22238 999999999999999999876567
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.++.+.+++.+++++.|++++.+++|+++||+||++|+++|+|+
T Consensus 166 ~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq~~~~~~~~cp~~W~~g~~~~~~~ 228 (240)
T 3qpm_A 166 HTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSDTIIPD 228 (240)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCCTTSCCBCSS
T ss_pred CccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhhhhhhcCCccCCCCCCCCceecCC
Confidence 678999999999999999999888889999999999999999999999999999999999975
No 8
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.97 E-value=2.4e-30 Score=203.85 Aligned_cols=134 Identities=25% Similarity=0.422 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|+++|++||+||+|+.+++.+|.+.+.+.. |. .+ +||+++|.++++++.||+..+..|
T Consensus 49 C~tEl~~l~~l~--~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~--~~-~i---~fPil~D~~~~ia~~ygv~~~~~g 120 (249)
T 3a2v_A 49 CTTEFVSFARRY--EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI--GV-RI---PFPIIADPQGTVARRLGLLHAESA 120 (249)
T ss_dssp HHHHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHHHHHHHT--CC-CC---CSCEEECTTSHHHHHHTCCCTTCS
T ss_pred hHHHHHHHHHHH--HHHHhCCcEEEEEECCCHHHHHHHHHHHHHhc--CC-CC---ceeEEECCchHHHHHhCCccccCC
Confidence 999999999999 69999999999999999999999998765532 22 28 999999999999999999865555
Q ss_pred C-cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCC-----CCCccccC
Q psy17183 82 H-SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTT-----GQPSVKVA 144 (145)
Q Consensus 82 ~-~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~-----~~~~~~~~ 144 (145)
. +.|++||||++|+|++..+++.+.+|+.+|+++.|++||.+++|+++||+|| + |+++|+|+
T Consensus 121 ~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~~~~~~~~~Pa~W-~~~~~~g~~~~~~~ 188 (249)
T 3a2v_A 121 THTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW-PNNEIIGEGLIVPP 188 (249)
T ss_dssp SSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHTCBBCTTT-TSBTTTBTCEEECC
T ss_pred CcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHhccccCccCCCCC-CCCCCCCCCeecCC
Confidence 4 7899999999999999999998889999999999999999999999999999 9 99999975
No 9
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=9.3e-30 Score=190.47 Aligned_cols=134 Identities=25% Similarity=0.473 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|+++|++||+||.|+++.+++|+++ ++ ++.++ +||+++|.+++++++||+.....|
T Consensus 46 C~~e~~~l~~~~--~~~~~~~v~vv~Is~d~~~~~~~~~~~---~~--~~~~~---~fp~l~D~~~~~~~~ygv~~~~~g 115 (186)
T 1n8j_A 46 SPTELGDVADHY--EELQKLGVDVYSVSTDTHFTHKAWHSS---SE--TIAKI---KYAMIGDPTGALTRNFDNMREDEG 115 (186)
T ss_dssp HHHHHHHHHHHH--HHHHHTTEEEEEEESSCHHHHHHHHHH---CT--TGGGC---CSEEEECTTSHHHHHTTCEETTTT
T ss_pred cHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHH---cC--cccCC---ceeEEECCchHHHHHhCCccCCCC
Confidence 999999999999 699999999999999999999999887 61 11128 999999999999999999854445
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccC-CcccCCCCCCCCCccccCC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDST-DTQCPVNWTTGQPSVKVAL 145 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~-~~~~p~~w~~~~~~~~~~~ 145 (145)
...|++||||++|+|++.+.++.+.+++.+++++.|++|+..++| +++||+||++|+++|+|.+
T Consensus 116 ~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~p~~w~~~~~~~~~~~ 180 (186)
T 1n8j_A 116 LADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSL 180 (186)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSTTCBBCTTCCTTSCCBCCSS
T ss_pred ceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHHHhhcCCCccCCCCCCCCccccCCh
Confidence 557999999999999999998876778899999999999999999 7999999999999999864
No 10
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.7e-29 Score=191.23 Aligned_cols=136 Identities=38% Similarity=0.624 Sum_probs=120.0
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|+++|++||+||.|+++.+++|++..++.. |+..+ +||+++|.+++++++||+.....|
T Consensus 64 C~~e~~~l~~l~--~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~--g~~~~---~fp~l~D~~~~~~~~ygv~~~~~g 136 (211)
T 2pn8_A 64 CPTEIIAFGDRL--EEFRSINTEVVACSVDSQFTHLAWINTPRRQG--GLGPI---RIPLLSDLTHQISKDYGVYLEDSG 136 (211)
T ss_dssp HHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCSC---SSCEEECTTSHHHHHTTCEETTTT
T ss_pred CHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHHhhhcc--CccCC---ceEEEECCchHHHHHcCCcccCCC
Confidence 999999999999 69999999999999999999999988632221 22227 899999999999999999754445
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.++.+.+++.+++++.|++|+..+.++++||+||++|+++|+|+
T Consensus 137 ~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~~g~~~~~~~ 199 (211)
T 2pn8_A 137 HTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPD 199 (211)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCCTTSCCBCSS
T ss_pred cccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhcccCCcccCCCCCCCCccccCC
Confidence 568999999999999999999877778999999999999999999999999999999999975
No 11
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.96 E-value=3.4e-28 Score=183.47 Aligned_cols=136 Identities=33% Similarity=0.574 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|++.|++||+||.|+.+.+++|++..++.. |+..+ +||+++|.++++++.||+.....|
T Consensus 52 C~~~~~~l~~l~--~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~--~~~~~---~~p~l~D~~~~~~~~ygv~~~~~g 124 (202)
T 1uul_A 52 CPTEICQFSDRV--KEFSDIGCEVLACSMDSEYSHLAWTSIERKRG--GLGQM---NIPILADKTKCIMKSYGVLKEEDG 124 (202)
T ss_dssp HHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHHSCGGGT--CCCSC---SSCEEECTTCHHHHHHTCEETTTT
T ss_pred CHHHHHHHHHHH--HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC--CCCCC---ceeEEECCchHHHHHcCCccCCCC
Confidence 999999999999 69999999999999999999999998632221 22238 999999999999999999865556
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.+..+.+++.+++++.|++|+..++++++||+||++|+++|+|+
T Consensus 125 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~~g~~~~~~~ 187 (202)
T 1uul_A 125 VAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWKPGDKTMKPD 187 (202)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCCTTSCCBCSS
T ss_pred ceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhhhhhcCCccCCCcCCCCceeccC
Confidence 678999999999999999999887788999999999999999999999999999999999975
No 12
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.96 E-value=2.2e-28 Score=187.14 Aligned_cols=135 Identities=33% Similarity=0.503 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|+.|++.|++++ ++|++.|++||+||.|+++.+++|++..++.. |+..+ +||+++|.+++++++||+.. ..|
T Consensus 68 C~~~~~~l~~l~--~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~--g~~~~---~fp~l~D~~~~~~~~ygv~~-~~g 139 (213)
T 2i81_A 68 CPSEIIALDKAL--DAFHERNVELLGCSVDSKYTHLAWKKTPLAKG--GIGNI---KHTLLSDITKSISKDYNVLF-DDS 139 (213)
T ss_dssp HHHHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHSSCGGGT--CCCSC---SSEEEECTTSHHHHHTTCEE-TTT
T ss_pred CHHHHHHHHHHH--HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC--CccCC---CceEEECCchHHHHHhCCcc-ccC
Confidence 999999999999 68999999999999999999999988632221 22238 99999999999999999985 345
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.+..+.+++.+++++.|++|+..+.++++||+||++|+++|+|+
T Consensus 140 ~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~w~~g~~~~~~~ 202 (213)
T 2i81_A 140 VSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGDVCPANWQKGKVSMKPS 202 (213)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHCCBCCTTCCTTSCCBCSS
T ss_pred CcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhhhcCCCcCCCCCcCCccccCC
Confidence 568999999999999999999877788999999999999999999999999999999999975
No 13
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.95 E-value=4.5e-28 Score=186.10 Aligned_cols=137 Identities=35% Similarity=0.568 Sum_probs=103.7
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|+.|++.|++++ ++|+++|++||+||.|+.+.+++|++..++.. |+..+ +||+++|.++++++.||+.....
T Consensus 71 ~C~~~~~~l~~l~--~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~--g~~~~---~fp~l~D~~~~i~~~ygv~~~~~ 143 (220)
T 1zye_A 71 VCPTEIIAFSDKA--SEFHDVNCEVVAVSVDSHFSHLAWINTPRKNG--GLGHM---NIALLSDLTKQISRDYGVLLEGP 143 (220)
T ss_dssp SSHHHHHHHHHHH--HHHHHTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCSC---SSEEEECTTSHHHHHTTCEETTT
T ss_pred CCHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHHHHHhC--CCcCC---ceEEEECCcHHHHHHhCCeecCC
Confidence 4999999999999 69999999999999999999999988632222 22237 99999999999999999986555
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|...|++||||++|+|++.+.++.+.+++.+++++.|++|+..++++++||+||++|+++|+|+
T Consensus 144 g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~W~~g~~~~~~~ 207 (220)
T 1zye_A 144 GLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWTPESPTIKPH 207 (220)
T ss_dssp TEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHTTC-------------------
T ss_pred CcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhhcccCCccCCCCCCCCceecCC
Confidence 6678999999999999999999887788999999999999999999999999999999999975
No 14
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.95 E-value=8.7e-28 Score=180.39 Aligned_cols=136 Identities=33% Similarity=0.557 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|..+++.|++++ ++|+..|++||+||.|+.+.+++|++...+.. ++..+ +||+++|.++++++.||+.....|
T Consensus 50 C~~~~~~l~~l~--~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~--~~~~~---~~p~l~D~~~~~~~~~gv~~~~~~ 122 (197)
T 1qmv_A 50 APTEIIAFSNRA--EDFRKLGCEVLGVSVDSQFTHLAWINTPRKEG--GLGPL---NIPLLADVTRRLSEDYGVLKTDEG 122 (197)
T ss_dssp HHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCSC---SSCEEECTTCHHHHHTTCEETTTT
T ss_pred CHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHHHHhhC--CCCCC---ceEEEECCcHHHHHHcCCccCCCC
Confidence 999999999999 68998999999999999999999988632221 22238 999999999999999999865456
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.+..+.+++.+++++.|++++..+.++++||+||++|+++|+|+
T Consensus 123 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~~~~~~~~~cp~~w~~g~~~~~~~ 185 (197)
T 1qmv_A 123 IAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIKPN 185 (197)
T ss_dssp EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCCTTSCCBCSS
T ss_pred ceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcchhhccCCccCCCcCcCCccccCC
Confidence 568999999999999999999887788999999999999999889999999999999999985
No 15
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.95 E-value=5.7e-28 Score=186.36 Aligned_cols=136 Identities=30% Similarity=0.527 Sum_probs=106.8
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|+.|++.|++++ ++|+++|++||+||.|+++.+++|++...+.. |+..+ +||+++|.++++++.||+. ...
T Consensus 71 ~C~~e~p~l~~l~--~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~--g~~~~---~fp~l~D~~~~~~~~ygv~-~~~ 142 (221)
T 2c0d_A 71 VCPTEIIEFNKHI--KDFENKNVELLGISVDSVYSHLAWKNMPIEKG--GIGNV---EFTLVSDINKDISKNYNVL-YDN 142 (221)
T ss_dssp CCHHHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHHSCGGGT--CCCSC---SSEEEECTTSHHHHHTTCE-ETT
T ss_pred chHHHHHHHHHHH--HHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhc--CccCC---ceEEEECCchHHHHHcCCc-ccC
Confidence 4999999999999 68999999999999999999999998732211 22127 8999999999999999997 444
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|...|++||||++|+|++.+.++.+.+++.+++++.|++|+..+.++++||+||++|+++|.|.
T Consensus 143 g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~~~~~~~~cp~~W~~g~~~~~~~ 206 (221)
T 2c0d_A 143 SFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWKKGQKAFKPT 206 (221)
T ss_dssp TEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHCCSCC-------------
T ss_pred CCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhcCCCcCCCCCCCCCccccCC
Confidence 5568999999999999999998876678899999999999999999999999999999999864
No 16
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.95 E-value=3.1e-27 Score=181.45 Aligned_cols=136 Identities=36% Similarity=0.601 Sum_probs=121.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|..|++.|++++ ++|+++|++||+||.|+.+...+|.+..++.. ++..+ +||+++|.++++++.||+.....|
T Consensus 85 C~~~~p~l~~l~--~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~--~~~~~---~~~~l~D~~~~~~~~ygv~~~~~g 157 (222)
T 3ztl_A 85 CPTEIIAFSDQV--EEFNSRNCQVIACSTDSQYSHLAWDNLDRKSG--GLGHM---KIPLLADRKQEISKAYGVFDEEDG 157 (222)
T ss_dssp HHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHHSCGGGT--SCCSC---SSCEEECSSSHHHHHTTCBCTTTS
T ss_pred hHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHHhhhhc--ccccc---ceeEEeCCchHHHHHcCCeecCCC
Confidence 999999999999 69999999999999999999999998743331 11128 999999999999999999866567
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
...|++||||++|+|++.+.+..+.++..+++++.|++++.++.++.+||+||++|+++|.|+
T Consensus 158 ~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~~~c~~~w~~~~~~~~~~ 220 (222)
T 3ztl_A 158 NAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWKRGQHGIKVN 220 (222)
T ss_dssp SBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCCTTSCCBCC-
T ss_pred CccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhcccccCccCCcCcCCCCccccCC
Confidence 678999999999999999999887777899999999999999999999999999999999975
No 17
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=8.8e-28 Score=179.50 Aligned_cols=136 Identities=29% Similarity=0.511 Sum_probs=113.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|+.+++.|++++ ++|++.|++||+||.|+++.+++|.+...+.. ++..+ +||+++|.++++++.||+.. ..
T Consensus 46 ~C~~~~~~l~~~~--~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~--~~~~~---~~~~l~D~~~~~~~~~gv~~-~~ 117 (192)
T 2h01_A 46 VCPSEIIALDKAL--DSFKERNVELLGCSVDSKFTHLAWKKTPLSQG--GIGNI---KHTLISDISKSIARSYDVLF-NE 117 (192)
T ss_dssp SCCHHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCSC---SSEEEECTTSHHHHHTTCEE-TT
T ss_pred CCHHHHHHHHHHH--HHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhC--CccCC---CcCeEECCcHHHHHHhCCcC-cC
Confidence 4999999999999 68998999999999999999999988632221 22237 89999999999999999975 34
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|...|++||||++|+|++.+.+..+.+++.+++++.|++++..+.++++||+||++|+++|+|+
T Consensus 118 g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~cp~~w~~~~~~~~~~ 181 (192)
T 2h01_A 118 SVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQKGKESMKPS 181 (192)
T ss_dssp TEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHHHHHHHCCCCCSSCCCC-------
T ss_pred CceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhhhhcCCCccCCCCCCCccccCC
Confidence 6568999999999999999998777778899999999999999999999999999999999975
No 18
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.93 E-value=1.1e-25 Score=167.29 Aligned_cols=131 Identities=25% Similarity=0.446 Sum_probs=104.6
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhc----CCCCCCCCCCCCccEEecCchHHHHHhCCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTAT----SSNRSAIDPSKIVPLLSDSTHAISKTYGCY 76 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~fpllsD~~~~va~~yg~~ 76 (145)
.|..+++.|++++ ++|+.+|++|++||.|+++.+++|++. + + + +||+++|.++++++.||+.
T Consensus 46 ~C~~~~~~l~~~~--~~~~~~~v~vv~vs~d~~~~~~~~~~~---~~~~~~------~---~~~~~~d~~~~~~~~~~v~ 111 (187)
T 1we0_A 46 VCPTELEDVQKEY--AELKKLGVEVYSVSTDTHFVHKAWHEN---SPAVGS------I---EYIMIGDPSQTISRQFDVL 111 (187)
T ss_dssp SCTHHHHHHHHHH--HHHHHTTEEEEEEESSCHHHHHHHHHS---CHHHHT------C---CSEEEECTTCHHHHHTTCE
T ss_pred chHHHHHHHHHHH--HHHHHcCCEEEEEECCCHHHHHHHHHH---hccccC------C---CceEEECCchHHHHHhCCC
Confidence 4999999999999 689988999999999999999999886 4 4 8 9999999999999999998
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccC-CcccCCCCCCCCCccccCC
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDST-DTQCPVNWTTGQPSVKVAL 145 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~-~~~~p~~w~~~~~~~~~~~ 145 (145)
....|...|++||||++|+|++.+.+..+.+++.+++++.|++++..+.| +.+||+||.+|+++|.+++
T Consensus 112 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~~p~~w~~~~~~~~~~~ 181 (187)
T 1we0_A 112 NEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGGETLKPSL 181 (187)
T ss_dssp ETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHHHHTSTTCCC---------------
T ss_pred cCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhhCCCcccccccccCCceeecCH
Confidence 54445568999999999999999999876667889999999999999999 7999999999999998654
No 19
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.92 E-value=1.1e-24 Score=163.42 Aligned_cols=136 Identities=28% Similarity=0.479 Sum_probs=106.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|..+++.|++++ ++|+..|++||+||.|+++.+++|++.+.+.. +...+ +||+++|.++++++.||+... .
T Consensus 48 ~C~~~~~~l~~l~--~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~--~~~~~---~~~~~~d~~~~~~~~~~v~~~-~ 119 (198)
T 1zof_A 48 VCPTEIIAFDKRV--KDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKG--GIGQV---SFPMVADITKSISRDYDVLFE-E 119 (198)
T ss_dssp SCCTHHHHHHHTH--HHHHHTTEEEEEEESSCHHHHHHHHTSCGGGT--CCCCC---SSCEEECTTSHHHHHTTCEET-T
T ss_pred chHHHHHHHHHHH--HHHHHcCCEEEEEECCCHHHHHHHHHhhhhcc--cccCc---eeEEEECCchHHHHHhCCccc-C
Confidence 4999999999999 68999999999999999999999988643321 11238 899999999999999999742 3
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVA 144 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~ 144 (145)
|...|++||||++|+|++.+.+..+.+++.+++++.|++++....|++.||+||++|+++|++.
T Consensus 120 g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~p~~w~~~~~~~~~~ 183 (198)
T 1zof_A 120 AIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWRKGDKGMKAT 183 (198)
T ss_dssp TEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHHHSSCCCCC-------------
T ss_pred CcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCCccCCcCcCCCccccCC
Confidence 4458999999999999999999876677899999999999999999999999999999999863
No 20
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=7.9e-24 Score=158.51 Aligned_cols=130 Identities=28% Similarity=0.452 Sum_probs=96.6
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|..+++.|.+++ ++|..++++||+||.|+++.+++|++. +. ++..+ +||+++|.++++++.||+... .
T Consensus 60 ~C~~~~~~l~~l~--~~~~~~~v~vv~Vs~d~~~~~~~~~~~---~~--~~~~~---~~~~~~d~~~~~~~~~~v~~~-~ 128 (195)
T 2bmx_A 60 VCPTEIAAFSKLN--DEFEDRDAQILGVSIDSEFAHFQWRAQ---HN--DLKTL---PFPMLSDIKRELSQAAGVLNA-D 128 (195)
T ss_dssp CCHHHHHHHHHTH--HHHHTTTEEEEEEESSCHHHHHHHHHH---CT--TGGGC---CSCEEECTTSHHHHHHTCBCT-T
T ss_pred CcHHHHHHHHHHH--HHHHHCCCEEEEEECCCHHHHHHHHHH---hc--cccCC---ceeEEeCCchHHHHHhCCccc-C
Confidence 4999999999999 689988999999999999999999886 51 11128 999999999999999999854 4
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCCCCCccccCC
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTTGQPSVKVAL 145 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~~~~~~~~~~ 145 (145)
|...|++||||++|+|++.+.+..+.+++.+++++.|++++. ++.||+||++|++++.|++
T Consensus 129 g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~----~~~~p~~w~~~~~~~~~~~ 189 (195)
T 2bmx_A 129 GVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCASNWRKGDPTLDAGE 189 (195)
T ss_dssp SSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-----------------------
T ss_pred CCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh----CCCcCcccccCCcccCCCh
Confidence 556899999999999999999987666789999999999985 7799999999999999764
No 21
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.88 E-value=1.9e-22 Score=146.99 Aligned_cols=107 Identities=23% Similarity=0.285 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
.|+.|+|.|++++ ++|+..|+++++||.|+++.+++|+++ ++ + +||+++|++++++++||+.....
T Consensus 45 ~C~~e~~~l~~~~--~~~~~~~~~~v~vs~d~~~~~~~~~~~---~~------~---~~p~l~D~~~~v~~~ygv~~~~~ 110 (157)
T 4g2e_A 45 VCTKEMCTFRDSM--AKFNQVNAVVLGISVDPPFSNKAFKEH---NK------L---NFTILSDYNREVVKKYNVAWEFP 110 (157)
T ss_dssp C------CCSCGG--GGGGGCSSEEEEEESSCHHHHHHHHHH---TT------C---CSEEEECTTSHHHHHTTCEEECT
T ss_pred ccccchhhccccc--ccccccCceEeeecccchhHHHHHHHH---cC------C---cEEEEEcCCcHHHHHcCCccccc
Confidence 4999999999999 699999999999999999999999986 76 8 99999999999999999965432
Q ss_pred C-----CcceEEEEECCCCcEEEEEeecCCCCC-CHHHHHHHHHhcc
Q psy17183 81 G-----HSLRAYYIIDKRGYLRSMNVSDIQVGR-NLKEILRQVEAFQ 121 (145)
Q Consensus 81 g-----~~~p~tfIID~dG~I~~~~~~~~~~~~-~~~ell~~i~~l~ 121 (145)
+ .+.|++||||++|+|++.++++.+.++ +.++++++|++|.
T Consensus 111 ~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~Ls 157 (157)
T 4g2e_A 111 ALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS 157 (157)
T ss_dssp TSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHTC
T ss_pred cCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHhC
Confidence 2 368999999999999999998876554 7999999999873
No 22
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.87 E-value=4.7e-23 Score=151.61 Aligned_cols=106 Identities=23% Similarity=0.292 Sum_probs=94.4
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC--
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS-- 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~-- 79 (145)
|+.|+|.|++++ ++|++.|+++++||.|+++.+++|+++ ++ + +||+|+|++++++++||+..+.
T Consensus 49 C~~e~~~l~~~~--~~~~~~~v~vv~is~d~~~~~~~~~~~---~~------~---~fp~l~D~~~~v~~~ygv~~~~~~ 114 (164)
T 4gqc_A 49 CTKELCTFRDKM--AQLEKANAEVLAISVDSPWCLKKFKDE---NR------L---AFNLLSDYNREVIKLYNVYHEDLK 114 (164)
T ss_dssp ECSSCEESCCCG--GGGGGSSSEEEEEESSCHHHHHHHHHH---TT------C---CSEEEECTTSHHHHHTTCEEEEET
T ss_pred cccchhhhhhhH--HHhhccCceEEEecCCCHHHHHHHHHh---cC------c---ccceeecCchHHHHHcCCcccccc
Confidence 999999999999 699999999999999999999999986 76 8 9999999999999999997532
Q ss_pred --CCCcceEEEEECCCCcEEEEEeecCCCCC-CHHHHHHHHHhcc
Q psy17183 80 --AGHSLRAYYIIDKRGYLRSMNVSDIQVGR-NLKEILRQVEAFQ 121 (145)
Q Consensus 80 --~g~~~p~tfIID~dG~I~~~~~~~~~~~~-~~~ell~~i~~l~ 121 (145)
.+.+.|++||||++|+|++.++++.+.++ +++|+++.|++|.
T Consensus 115 ~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 115 GLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp TEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred cCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 12468999999999999999998876655 8999999998874
No 23
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.87 E-value=8.5e-22 Score=146.81 Aligned_cols=104 Identities=20% Similarity=0.268 Sum_probs=93.2
Q ss_pred hh-HHHHHHHHHhhhhhhhcCCcEEEE-EeCCCHHHHHHHHHHHhhcCCCCCCCCCCCC--ccEEecCchHHHHHhCCCc
Q psy17183 2 DT-KIACDVLKLVRKEILIVSPFQIIA-VSVDSHLAHLAWTKTLTATSSNRSAIDPSKI--VPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 2 ~t-~e~~~~~~~~~~~~f~~~gv~vi~-VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~--fpllsD~~~~va~~yg~~~ 77 (145)
|+ .|+|.|++++ ++|+++|++||| ||.|+++.+++|+++ ++ + + ||+|+|++++++++||+..
T Consensus 59 C~~~e~p~l~~~~--~~~~~~gv~vv~~iS~D~~~~~~~f~~~---~~------~---~~~fp~l~D~~~~va~~yGv~~ 124 (173)
T 3mng_A 59 CSKTHLPGFVEQA--EALKAKGVQVVACLSVNDAFVTGEWGRA---HK------A---EGKVRLLADPTGAFGKETDLLL 124 (173)
T ss_dssp HHHTHHHHHHHTH--HHHHTTTCCEEEEEESSCHHHHHHHHHH---TT------C---TTTCEEEECTTCHHHHHHTCBC
T ss_pred CCHHHHHHHHHHH--HHHHhCCCEEEEEEcCCCHHHHHHHHHH---hC------C---CCceEEEECCChHHHHHhCCCc
Confidence 99 5999999999 699999999997 999999999999997 65 6 6 9999999999999999986
Q ss_pred cCC-----C--CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 78 SSA-----G--HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 78 ~~~-----g--~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+.. | .+.|+||||| +|+|++.++++.+.+++..++.+.|++|
T Consensus 125 ~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 125 DDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp CSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred ccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 531 2 3679999999 9999999999998899988888888765
No 24
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.85 E-value=3.7e-21 Score=144.49 Aligned_cols=103 Identities=18% Similarity=0.257 Sum_probs=85.6
Q ss_pred hhH-HHHHHHHHhhhhhhhcCCc-EEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCC--ccEEecCchHHHHHhCCCc
Q psy17183 2 DTK-IACDVLKLVRKEILIVSPF-QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKI--VPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 2 ~t~-e~~~~~~~~~~~~f~~~gv-~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~--fpllsD~~~~va~~yg~~~ 77 (145)
||. |+|.|++++ ++|+++|+ +|+|||+|+++++++|+++ .+ + + ||+|+|++++++++||+..
T Consensus 63 Ct~~El~~f~~~~--~ef~~~g~d~VigIS~D~~~~~~~f~~~---~~------l---~~~f~lLsD~~~~va~ayGv~~ 128 (176)
T 4f82_A 63 CSAQHVPGYVEHA--EQLRAAGIDEIWCVSVNDAFVMGAWGRD---LH------T---AGKVRMMADGSAAFTHALGLTQ 128 (176)
T ss_dssp HHHTHHHHHHHHH--HHHHHTTCCEEEEEESSCHHHHHHHHHH---TT------C---TTTSEEEECTTCHHHHHHTCEE
T ss_pred CCHHHHHHHHHHH--HHHHhCCCCEEEEEeCCCHHHHHHHHHH---hC------C---CCCceEEEcCchHHHHHhCCCc
Confidence 999 999999999 69999999 9999999999999999997 65 7 7 9999999999999999986
Q ss_pred cC--CCC---cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 78 SS--AGH---SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 78 ~~--~g~---~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+. .|+ +.|++||| ++|+|++.++++ +.+++..++.+.|++|
T Consensus 129 ~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~-~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 129 DLSARGMGIRSLRYAMVI-DGGVVKTLAVEA-PGKFEVSDAASVLATL 174 (176)
T ss_dssp ECGGGTCCEEECCEEEEE-ETTEEEEEEECC-TTCCSSSSHHHHHHTC
T ss_pred cccccCCCcccccEEEEE-cCCEEEEEEEcC-CCCcchhhHHHHHHHh
Confidence 53 343 57999999 999999999987 3333333444444444
No 25
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.84 E-value=1.4e-20 Score=141.81 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=90.4
Q ss_pred hh-HHHHHHHHHhhhhhh-hcCCcE-EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 2 DT-KIACDVLKLVRKEIL-IVSPFQ-IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t-~e~~~~~~~~~~~~f-~~~gv~-vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
|| .|+|.|++.+ ++| +++|+. |+|||+|+++++++|+++ .+ +. +||+|||++++++++||+..+
T Consensus 59 Ct~~e~~~f~~~~--~~f~~~~g~~~V~gvS~D~~~~~~~~~~~---~~------~~--~f~lLsD~~~~~a~~yGv~~~ 125 (182)
T 1xiy_A 59 CSTKMIPGYEEEY--DYFIKENNFDDIYCITNNDIYVLKSWFKS---MD------IK--KIKYISDGNSSFTDSMNMLVD 125 (182)
T ss_dssp HHHTHHHHHHHTH--HHHHTTSCCSEEEEEESSCHHHHHHHHHH---TT------CC--SSEEEECTTSHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHH--HHHHHhCCCcEEEEEeCCCHHHHHHHHHH---cC------CC--CceEEEeCchHHHHHhCCcee
Confidence 99 9999999999 699 999995 999999999999999997 54 51 599999999999999999754
Q ss_pred C--CCC---cceEEEEECCCCcEEEEEeecCCC---------CCCHHHHHHHHHhcc
Q psy17183 79 S--AGH---SLRAYYIIDKRGYLRSMNVSDIQV---------GRNLKEILRQVEAFQ 121 (145)
Q Consensus 79 ~--~g~---~~p~tfIID~dG~I~~~~~~~~~~---------~~~~~ell~~i~~l~ 121 (145)
. .|+ +.|++|||| +|+|++.++.+.+. ..+.+++|+.|++.+
T Consensus 126 ~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~~ 181 (182)
T 1xiy_A 126 KSNFFMGMRPWRFVAIVE-NNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNNQ 181 (182)
T ss_dssp CGGGTCCEEECCEEEEEE-TTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC-
T ss_pred ccccCCCCceEEEEEEEc-CCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhcc
Confidence 3 242 689999999 99999999876443 368999999998644
No 26
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.83 E-value=6.8e-21 Score=154.43 Aligned_cols=112 Identities=19% Similarity=0.313 Sum_probs=94.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
||.|+|.|++. .| .|++|+|||.|+++++++|+++ ++ + +||+|+|++++++++||+.. .|
T Consensus 40 C~~e~~~~~~~----~~--~~~~v~gis~D~~~~~~~f~~~---~~------l---~fp~l~D~~~~v~~~ygv~~--~~ 99 (322)
T 4eo3_A 40 STREAVEFSRE----NF--EKAQVVGISRDSVEALKRFKEK---ND------L---KVTLLSDPEGILHEFFNVLE--NG 99 (322)
T ss_dssp HHHHHHHHHHS----CC--TTEEEEEEESCCHHHHHHHHHH---HT------C---CSEEEECTTCHHHHHTTCEE--TT
T ss_pred CHHHHHHHHHH----hh--CCCEEEEEeCCCHHHHHHHHHh---hC------C---ceEEEEcCchHHHHhcCCCC--CC
Confidence 99999999763 34 3899999999999999999997 76 9 99999999999999999974 25
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCC
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWT 135 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~ 135 (145)
.+.|+|||||++|+|++++.+. .++.|.+|+|+.|++++. +++.....++|.
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v-~~~~h~~~~l~~~~~~~~-~~~~~~~~I~~R 151 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRV-KVEGHVQEVKEALDRLIE-EDLSLNKHIEWR 151 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESC-CSTTHHHHHHHHHHHHHH-HHTSCCHHHHHC
T ss_pred cCccEEEEECCCCEEEEEEeCC-CccccHHHHHHHHhhhch-hhhHHHHHHHhh
Confidence 6789999999999999998765 567799999999999985 445544444443
No 27
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.81 E-value=6.3e-20 Score=137.08 Aligned_cols=105 Identities=19% Similarity=0.258 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcE-EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQ-IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~-vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~ 79 (145)
.||.|+|.|++.+ ++|+++|++ |+|||+|+++++++|+++ .+ +. . +||+|||++++++++||+..+.
T Consensus 57 ~Ct~e~~~f~~~~--~ef~~~gv~~VigIS~D~~~~~~~w~~~---~~---~~-~---~f~lLSD~~~~~a~ayGv~~~~ 124 (171)
T 2xhf_A 57 GSNNHIPEYLSLY--DKFKEEGYHTIACIAVNDPFVMAAWGKT---VD---PE-H---KIRMLADMHGEFTRALGTELDS 124 (171)
T ss_dssp TTTSSHHHHHHTH--HHHHHTTCCEEEEEESSCHHHHHHHHHH---HC---TT-C---CSEEEECTTSHHHHHHTCBCCC
T ss_pred cCHHHHHHHHHHH--HHHHHCCCCEEEEEeCCCHHHHHHHHHh---cC---CC-C---CeEEEEeCCchHHHHhCCceec
Confidence 3999999999999 799999996 999999999999999997 43 11 3 7999999999999999998653
Q ss_pred C----C-CcceEEEEECCCCcEEEEEeecCCCCC---CHHHHHHHHH
Q psy17183 80 A----G-HSLRAYYIIDKRGYLRSMNVSDIQVGR---NLKEILRQVE 118 (145)
Q Consensus 80 ~----g-~~~p~tfIID~dG~I~~~~~~~~~~~~---~~~ell~~i~ 118 (145)
. | .+.|++|||| +|+|++.++.+.+.+. +.++++++++
T Consensus 125 ~~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 125 SKMLGNNRSRRYAMLID-DNKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp HHHHSSCCBCCEEEEEE-TTEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred cccCCCcceEEEEEEEe-CCEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 1 2 3789999998 9999999998755322 3455555443
No 28
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.80 E-value=2e-19 Score=135.16 Aligned_cols=100 Identities=17% Similarity=0.244 Sum_probs=84.7
Q ss_pred hhH-HHHHHHHHhhhhhhhcCCcE-EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCC--ccEEecCchHHHHHhCCCc
Q psy17183 2 DTK-IACDVLKLVRKEILIVSPFQ-IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKI--VPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 2 ~t~-e~~~~~~~~~~~~f~~~gv~-vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~--fpllsD~~~~va~~yg~~~ 77 (145)
|+. |+|.|++++ ++|+++|++ |+|||.|+++.+++|+++ ++ + + ||+++|++++++++||+..
T Consensus 72 C~~~e~p~l~~~~--~~~~~~gv~~vv~Is~d~~~~~~~f~~~---~~------~---~~~fp~l~D~~~~va~~yGv~~ 137 (184)
T 3uma_A 72 CSLNHLPGYLENR--DAILARGVDDIAVVAVNDLHVMGAWATH---SG------G---MGKIHFLSDWNAAFTKAIGMEI 137 (184)
T ss_dssp HHHTHHHHHHHTH--HHHHTTTCCEEEEEESSCHHHHHHHHHH---HT------C---TTTSEEEECTTCHHHHHTTCEE
T ss_pred cCHHHHHHHHHHH--HHHHHcCCCEEEEEECCCHHHHHHHHHH---hC------C---CCceEEEEcCchHHHHHcCCce
Confidence 999 899999999 699999999 999999999999999997 66 7 7 9999999999999999975
Q ss_pred cC--CCC---cceEEEEECCCCcEEEEEeecCCCC---CCHHHHHHH
Q psy17183 78 SS--AGH---SLRAYYIIDKRGYLRSMNVSDIQVG---RNLKEILRQ 116 (145)
Q Consensus 78 ~~--~g~---~~p~tfIID~dG~I~~~~~~~~~~~---~~~~ell~~ 116 (145)
.. .|+ +.|++|||| +|+|++.++++.+.. .+.+++|+.
T Consensus 138 ~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 138 DLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp EEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred eccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 32 232 579999996 999999999986544 345555553
No 29
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.79 E-value=1.1e-18 Score=125.93 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC-
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA- 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~- 80 (145)
|+.|++.|++++ ++|+++|++||+||.|+++..++|+++ ++ + +||+++|.++++++.||+.....
T Consensus 51 C~~~~~~l~~~~--~~~~~~~~~vv~vs~d~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~~~~~~ 116 (163)
T 3gkn_A 51 ATTEGLDFNALL--PEFDKAGAKILGVSRDSVKSHDNFCAK---QG------F---AFPLVSDGDEALCRAFDVIKEKNM 116 (163)
T ss_dssp HHHHHHHHHHHH--HHHHHTTCEEEEEESSCHHHHHHHHHH---HC------C---SSCEEECTTCHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHCCCEEEEEeCCCHHHHHHHHHH---hC------C---CceEEECCcHHHHHHhCCcccccc
Confidence 999999999999 699999999999999999999999986 76 8 99999999999999999975211
Q ss_pred -CC----cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 81 -GH----SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 -g~----~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|. ..|++||||++|+|++.+ .......+.+++++.|++|+
T Consensus 117 ~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 117 YGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp TTEEEEEECCEEEEECTTSCEEEEE-CSCCSTTHHHHHHHHHHHHC
T ss_pred ccccccCcceEEEEECCCCeEEEEE-cCCCcccCHHHHHHHHHHHh
Confidence 11 279999999999999998 44445567899999999886
No 30
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.79 E-value=1e-18 Score=129.37 Aligned_cols=105 Identities=18% Similarity=0.233 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC-
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA- 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~- 80 (145)
|+.|++.|++++ ++|+++|++||+||.|+++..++|+++ ++ + +||+++|.++++++.||+.....
T Consensus 67 C~~el~~l~~l~--~~~~~~~~~vv~Vs~D~~~~~~~~~~~---~~------~---~f~~l~D~~~~~~~~~gv~~~~~~ 132 (179)
T 3ixr_A 67 SSTEGLEFNLLL--PQFEQINATVLGVSRDSVKSHDSFCAK---QG------F---TFPLVSDSDAILCKAFDVIKEKTM 132 (179)
T ss_dssp HHHHHHHHHHHH--HHHHTTTEEEEEEESCCHHHHHHHHHH---HT------C---CSCEEECTTCHHHHHTTCEEEECC
T ss_pred hHHHHHHHHHHH--HHHHHCCCEEEEEcCCCHHHHHHHHHH---cC------C---ceEEEECCchHHHHHcCCcccccc
Confidence 999999999999 699999999999999999999999986 76 8 99999999999999999975321
Q ss_pred -CC----cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 81 -GH----SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 -g~----~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|. ..|++||||++|+|++.+. .....++.+++++.|++|+
T Consensus 133 ~g~~~~~~~p~~~lID~~G~I~~~~~-~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 133 YGRQVIGIERSTFLIGPTHRIVEAWR-QVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp C--CEEEECCEEEEECTTSBEEEEEC-SCCSTTHHHHHHHHHHHHH
T ss_pred cCcccCCcceEEEEECCCCEEEEEEc-CCCCCCCHHHHHHHHHHHh
Confidence 11 3699999999999999984 3445667899999999876
No 31
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.79 E-value=9.2e-19 Score=126.88 Aligned_cols=111 Identities=21% Similarity=0.238 Sum_probs=97.0
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|..+++.|++++ ++|+.+|++||+||.|+++..++|+++ ++ + +||+++|.++++++.||+... +
T Consensus 45 C~~~~~~l~~~~--~~~~~~~v~vv~vs~d~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~~~--~ 108 (161)
T 3drn_A 45 STREASAFRDNW--DLLKDYDVVVIGVSSDDINSHKRFKEK---YK------L---PFILVSDPDKKIRELYGAKGF--I 108 (161)
T ss_dssp HHHHHHHHHHTH--HHHHTTCEEEEEEESCCHHHHHHHHHH---TT------C---CSEEEECTTSHHHHHTTCCCS--S
T ss_pred hHHHHHHHHHHH--HHHHHcCCEEEEEeCCCHHHHHHHHHH---hC------C---CceEEECCcHHHHHHcCCCCc--C
Confidence 999999999999 699999999999999999999999987 76 8 999999999999999999721 2
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCc
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDT 128 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~ 128 (145)
...|++||||++|+|++.+.+......+.+++++.|++|+..+++..
T Consensus 109 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~~ 155 (161)
T 3drn_A 109 LPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIKEEEISLE 155 (161)
T ss_dssp SCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHHHHHHC--
T ss_pred cccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhhhhhcchh
Confidence 35799999999999999999865556678999999999998765543
No 32
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.78 E-value=1.8e-18 Score=131.95 Aligned_cols=118 Identities=17% Similarity=0.220 Sum_probs=93.9
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC--------CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHh
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV--------DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTY 73 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~--------D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~y 73 (145)
|..+++.|++++ ++|+.+|++||+||. |+++..++|+++ ++ + +||+++|.++++++.|
T Consensus 74 C~~~~~~l~~l~--~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~---~~------~---~~~~l~D~~~~~~~~~ 139 (218)
T 3u5r_E 74 VVLIREALAKFA--GDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKA---YG------Y---GFPYLKDASQSVAKAY 139 (218)
T ss_dssp HHTTHHHHHHHH--HHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHH---HT------C---CSCEEECTTCHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHhCCcEEEEEECCcccccccCCHHHHHHHHHH---hC------C---CccEEECCccHHHHHc
Confidence 899999999999 699999999999999 788889999886 76 8 9999999999999999
Q ss_pred CCCccCCCCcceEEEEECCCCcEEEEEeecCC-----CCCCHHHHHHHHHhcccccc------CCcccCCCCCCCCC
Q psy17183 74 GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQ-----VGRNLKEILRQVEAFQLVDS------TDTQCPVNWTTGQP 139 (145)
Q Consensus 74 g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~-----~~~~~~ell~~i~~l~~~~~------~~~~~p~~w~~~~~ 139 (145)
|+. ..|++||||++|+|++....+.. .....+++.++|+++..... .+.+||++|.+|.+
T Consensus 140 ~v~------~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~GC~i~w~~~~~ 210 (218)
T 3u5r_E 140 GAA------CTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVGTTQVPSIGCNIKWTAGNE 210 (218)
T ss_dssp TCC------EESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCCSCCCCCEEEECCCCCC--
T ss_pred CCC------CCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCCCcCCcCCCCeeEEeCCCCC
Confidence 998 37999999999999987543221 11235667777766643322 23679999999865
No 33
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.78 E-value=2.6e-18 Score=132.40 Aligned_cols=105 Identities=16% Similarity=0.279 Sum_probs=92.4
Q ss_pred hh-HHHHHHHHHhhhhhhhcCCc-EEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCC-ccEEecCchHHHHHhCCCcc
Q psy17183 2 DT-KIACDVLKLVRKEILIVSPF-QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKI-VPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t-~e~~~~~~~~~~~~f~~~gv-~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-fpllsD~~~~va~~yg~~~~ 78 (145)
|+ .|+|.|++++ ++|+++|+ +|+|||.|+++.+++|+++ ++ + + ||+++|.+++++++||+...
T Consensus 49 C~~~e~~~l~~~~--~~~~~~~~~~vv~is~d~~~~~~~~~~~---~~------~---~~~~~l~D~~~~~~~~~gv~~~ 114 (241)
T 1nm3_A 49 CSSSHLPRYNELA--PVFKKYGVDDILVVSVNDTFVMNAWKED---EK------S---ENISFIPDGNGEFTEGMGMLVG 114 (241)
T ss_dssp HHHTHHHHHHHHH--HHHHHTTCCEEEEEESSCHHHHHHHHHH---TT------C---TTSEEEECTTSHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHH--HHHHHCCCCEEEEEEcCCHHHHHHHHHh---cC------C---CceEEEECCCcHHHHHhCceee
Confidence 99 9999999999 69999999 9999999999999999987 65 6 6 99999999999999999753
Q ss_pred C--CCC---cceEEEEECCCCcEEEEEeecCCCC-----CCHHHHHHHHHhcc
Q psy17183 79 S--AGH---SLRAYYIIDKRGYLRSMNVSDIQVG-----RNLKEILRQVEAFQ 121 (145)
Q Consensus 79 ~--~g~---~~p~tfIID~dG~I~~~~~~~~~~~-----~~~~ell~~i~~l~ 121 (145)
. .|. +.|++||| ++|+|++.+++..+.+ ++.+++++.|++..
T Consensus 115 ~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~ 166 (241)
T 1nm3_A 115 KEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH 166 (241)
T ss_dssp CTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS
T ss_pred cccccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc
Confidence 2 243 57999999 9999999999987665 58999999998764
No 34
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.77 E-value=2.9e-18 Score=133.08 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=89.2
Q ss_pred Chh-----HHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC-chHHHHHhC
Q psy17183 1 MDT-----KIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS-THAISKTYG 74 (145)
Q Consensus 1 ~~t-----~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~-~~~va~~yg 74 (145)
.|+ .|+|.|++. | .|++|||||.|+++++++|+++ ++ ++ +||+|+|. +++++++||
T Consensus 63 ~C~~~~~~~El~~~~~~-----~--~gv~VvgIS~Ds~~~~~~f~~~---~g------l~--~fplLsD~~~~~vak~yG 124 (224)
T 3keb_A 63 EHAGLLLLRETRRFLDS-----W--PHLKLIVITVDSPSSLARARHE---HG------LP--NIALLSTLRGRDFHKRYG 124 (224)
T ss_dssp TTTSHHHHHHHHHHHTT-----C--TTSEEEEEESSCHHHHHHHHHH---HC------CT--TCEEEESTTCTTHHHHTT
T ss_pred CCCCCccHHHHHHHHHH-----c--CCCEEEEEECCCHHHHHHHHHH---cC------CC--CceEEEcCCchHHHHHhC
Confidence 389 999988875 4 6899999999999999999997 65 62 49999999 799999999
Q ss_pred CCccC---CCCcceEEEEECCCCcEEEEEeecCCC-CCCHHHHHHHHHhccc
Q psy17183 75 CYLSS---AGHSLRAYYIIDKRGYLRSMNVSDIQV-GRNLKEILRQVEAFQL 122 (145)
Q Consensus 75 ~~~~~---~g~~~p~tfIID~dG~I~~~~~~~~~~-~~~~~ell~~i~~l~~ 122 (145)
+.... .|.+.|++||||++|+|++.++.+... .+++++++++|+.++.
T Consensus 125 v~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 125 VLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp CBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred CccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 98643 466789999999999999999877644 4689999999998875
No 35
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.77 E-value=1.1e-17 Score=121.44 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec-CchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD-STHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD-~~~~va~~yg~~~~~~ 80 (145)
|+.|++.|++++ ++| .|++||+||.|+++.+++|+++ ++ ++ +||+++| .+++++++||+.....
T Consensus 58 C~~~~~~l~~~~--~~~--~~v~vv~is~d~~~~~~~~~~~---~~------~~--~~~~l~D~~~~~~~~~~gv~~~~~ 122 (163)
T 1psq_A 58 CSTQTRRFNEEL--AGL--DNTVVLTVSMDLPFAQKRWCGA---EG------LD--NAIMLSDYFDHSFGRDYALLINEW 122 (163)
T ss_dssp HHHHHHHHHHHT--TTC--TTEEEEEEESSCHHHHHHHHHH---HT------CT--TSEEEECTTTCHHHHHHTCBCTTT
T ss_pred cHHHHHHHHHHH--HHc--CCcEEEEEECCCHHHHHHHHHh---cC------CC--CcEEecCCchhHHHHHhCCccccC
Confidence 999999999999 578 7999999999999999999986 54 42 5999999 8999999999985434
Q ss_pred CCcceEEEEECCCCcEEEEEeecCC-CCCCHHHHHHHHHhc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQ-VGRNLKEILRQVEAF 120 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~-~~~~~~ell~~i~~l 120 (145)
|...|++||||++|+|++.+.+... ...+.+++++.|++|
T Consensus 123 g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 123 HLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp CSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred CceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 5557999999999999999998643 345789999999865
No 36
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.76 E-value=2e-18 Score=127.50 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=84.1
Q ss_pred ChhHH-HHHHHHHhhhhhhhcCCcE-EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 1 MDTKI-ACDVLKLVRKEILIVSPFQ-IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 1 ~~t~e-~~~~~~~~~~~~f~~~gv~-vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
.|+.| +|.|++++ ++|+++|++ |+|||.|+++.+++|+++ ++ +. + +||+++|.+++++++||+...
T Consensus 58 ~C~~eh~p~l~~~~--~~~~~~g~~~vv~Is~d~~~~~~~~~~~---~~---~~-~---~fp~l~D~~~~~~~~ygv~~~ 125 (171)
T 2pwj_A 58 VCSSKHVPPYKHNI--DKFKAKGVDSVICVAINDPYTVNAWAEK---IQ---AK-D---AIEFYGDFDGSFHKSLELTTD 125 (171)
T ss_dssp THHHHTHHHHHHTH--HHHHHTTCSEEEEEESSCHHHHHHHHHH---TT---CT-T---TSEEEECTTCHHHHHHTCEEE
T ss_pred CCCHHHHHHHHHHH--HHHHHCCCCEEEEEeCCCHHHHHHHHHH---hC---CC-C---ceEEEECCccHHHHHhCCccc
Confidence 39999 99999999 699999999 999999999999999986 54 11 3 699999999999999999753
Q ss_pred CC----CC-cceEEEEECCCCcEEEEEeecCCCCC---CHHHHHHH
Q psy17183 79 SA----GH-SLRAYYIIDKRGYLRSMNVSDIQVGR---NLKEILRQ 116 (145)
Q Consensus 79 ~~----g~-~~p~tfIID~dG~I~~~~~~~~~~~~---~~~ell~~ 116 (145)
.. |. ..|.+|||| +|+|++.+++..+.++ +.+++|++
T Consensus 126 ~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~~~~~~~~~il~~ 170 (171)
T 2pwj_A 126 LSAGLLGIRSERWSAYVV-DGKVKALNVEESPSDVKVSGAETILGQ 170 (171)
T ss_dssp CTTTTCCEEECCEEEEEE-TTEEEEEEECSSTTCCSSSSHHHHHHH
T ss_pred cccccCCcccceeEEEEE-CCEEEEEEeecCCCCCcccCHHHHHhc
Confidence 21 32 368899999 9999999999877654 35555543
No 37
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.76 E-value=1.1e-17 Score=121.87 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=88.6
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC-chHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS-THAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~-~~~va~~yg~~~~~~ 80 (145)
|+.|++.|+++++ + .|++||+||.|+++.+++|+++ ++ ++ +||+++|. +++++++||+.....
T Consensus 62 C~~~~~~l~~~~~--~---~~~~vv~is~d~~~~~~~~~~~---~~------~~--~~~~l~D~~~~~~~~~~gv~~~~~ 125 (166)
T 3p7x_A 62 CDQQTRKFNSDAS--K---EEGIVLTISADLPFAQKRWCAS---AG------LD--NVITLSDHRDLSFGENYGVVMEEL 125 (166)
T ss_dssp HHHHHHHHHHHSC--T---TTSEEEEEESSCHHHHHHHHHH---HT------CS--SCEEEECTTTCHHHHHHTCEETTT
T ss_pred cHHHHHHHHHHhh--c---CCCEEEEEECCCHHHHHHHHHH---cC------CC--ceEEccCCchhHHHHHhCCccccC
Confidence 9999999999994 4 7999999999999999999986 65 42 59999999 999999999986555
Q ss_pred CCcceEEEEECCCCcEEEEEeecC-CCCCCHHHHHHHHHhc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDI-QVGRNLKEILRQVEAF 120 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~-~~~~~~~ell~~i~~l 120 (145)
|...|++||||++|+|++.+.+.. ....+.+++++.|+++
T Consensus 126 g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 126 RLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp TEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred CceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 666899999999999999988764 3355789999998864
No 38
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.76 E-value=1.7e-17 Score=119.21 Aligned_cols=106 Identities=21% Similarity=0.284 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC--chHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS--THAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~--~~~va~~yg~~~~~ 79 (145)
|..+++.|.+++ ++|+..|++|++||.|+++..++|+++ ++ + +||+++|. ++++++.||+....
T Consensus 52 C~~~~~~l~~~~--~~~~~~~~~vv~is~d~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 52 CQGELDQLRDHL--PEFENDDSAALAISVGPPPTHKIWATQ---SG------F---TFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp HHHHHHHHHHTG--GGTSSSSEEEEEEESCCHHHHHHHHHH---HT------C---CSCEEECTTTTTHHHHHTTCEETT
T ss_pred hHHHHHHHHHHH--HHHHHCCcEEEEEeCCCHHHHHHHHHh---cC------C---CceEEecCCcChHHHHHcCCcccc
Confidence 999999999999 689888999999999999999999886 76 8 99999996 99999999997543
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|++.|++||||++|+|++.+.+........+++++.|++++
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 354455999999999999999988655668999999999876
No 39
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.76 E-value=8.4e-18 Score=124.46 Aligned_cols=117 Identities=15% Similarity=0.221 Sum_probs=94.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC--------CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHh
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV--------DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTY 73 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~--------D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~y 73 (145)
|..+++.|.+++ ++|..+|+++++|+. |+.+..++|++. ++ + +||+++|.++++++.|
T Consensus 61 C~~~~~~l~~l~--~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 61 VKHVQHELVRLA--NDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEE---LG------Y---PFPYLYDETQEVAKAY 126 (196)
T ss_dssp HHHHHHHHHHHH--HHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHH---HT------C---CSCEEECSSCHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHhCCcEEEEEECCccccccccCHHHHHHHHHH---cC------C---CceEEECCchHHHHHh
Confidence 899999999999 689888999999998 678888899886 76 8 9999999999999999
Q ss_pred CCCccCCCCcceEEEEECCCCcEEEEEeecC-----CCCCCHHHHHHHHHhccccc------cCCcccCCCCCCCC
Q psy17183 74 GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDI-----QVGRNLKEILRQVEAFQLVD------STDTQCPVNWTTGQ 138 (145)
Q Consensus 74 g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~-----~~~~~~~ell~~i~~l~~~~------~~~~~~p~~w~~~~ 138 (145)
|+. ..|++||||++|+|++.+.+.. ....+.+++.+.|+++.... ..+.+||++|.+|+
T Consensus 127 ~v~------~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~~~~~~~~gC~~~~~~~~ 196 (196)
T 2ywi_A 127 DAA------CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVPEKQKPSIGCSIKWKPSA 196 (196)
T ss_dssp TCC------EESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCCSCCCCCEEEECCCCCCC
T ss_pred CCC------CCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCCCCCCCCCceeeeeccCC
Confidence 987 3799999999999999865331 11125577777777664322 22477999999874
No 40
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.75 E-value=6.5e-18 Score=124.57 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=86.1
Q ss_pred hhH-HHHHHHHHhhhhhhhcCCc-EEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCC--ccEEecCchHHHHHhCCCc
Q psy17183 2 DTK-IACDVLKLVRKEILIVSPF-QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKI--VPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 2 ~t~-e~~~~~~~~~~~~f~~~gv-~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~--fpllsD~~~~va~~yg~~~ 77 (145)
|+. |+|.|++++ ++|+++|+ +||+||.|+++.+++|+++ ++ + + ||+++|.+++++++||+..
T Consensus 47 C~~~e~p~l~~~~--~~~~~~gv~~vv~Is~d~~~~~~~~~~~---~~------~---~~~fp~l~D~~~~~~~~~gv~~ 112 (167)
T 2wfc_A 47 SSKTHLPGYVEQA--AAIHGKGVDIIACMAVNDSFVMDAWGKA---HG------A---DDKVQMLADPGGAFTKAVDMEL 112 (167)
T ss_dssp HHHTHHHHHHHTH--HHHHHTTCCEEEEEESSCHHHHHHHHHH---TT------C---TTTSEEEECTTSHHHHHTTCEE
T ss_pred CCHHHHHHHHHHH--HHHHHCCCCEEEEEeCCCHHHHHHHHHh---cC------C---CcceEEEECCCCcHHHHcCCcc
Confidence 999 999999999 69999999 9999999999999999997 66 7 7 9999999999999999874
Q ss_pred cC---CC--CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 78 SS---AG--HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 78 ~~---~g--~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.. .| .+.|++||| ++|+|++.++++.+.++++......++.|.
T Consensus 113 ~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (167)
T 2wfc_A 113 DLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCSLAPNILSQLG 160 (167)
T ss_dssp CCHHHHSSCEECCEEEEE-ETTEEEEEEECTTSSSSSTTSHHHHHHHHC
T ss_pred ccccccCcccceEEEEEE-eCCEEEEEEecCCCCcceeccHHHHHHHhc
Confidence 21 01 146999999 999999999988765555444444444443
No 41
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.75 E-value=5.7e-18 Score=123.42 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=84.0
Q ss_pred hh-HHHHHHHHHhhhhhhhcCCcE-EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC
Q psy17183 2 DT-KIACDVLKLVRKEILIVSPFQ-IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t-~e~~~~~~~~~~~~f~~~gv~-vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~ 79 (145)
|+ .|+|.|++++ ++|+++|++ ||+||.|+++.+++|+++ ++ ++. +||+++|.+++++++||+....
T Consensus 51 C~~~e~~~l~~~~--~~~~~~~v~~vv~Is~d~~~~~~~~~~~---~~------~~~-~~~~l~D~~~~~~~~~gv~~~~ 118 (162)
T 1tp9_A 51 CSLKHVPGFIEKA--GELKSKGVTEILCISVNDPFVMKAWAKS---YP------ENK-HVKFLADGSATYTHALGLELDL 118 (162)
T ss_dssp HHHTHHHHHHHHH--HHHHHTTCCCEEEEESSCHHHHHHHHHT---CT------TCS-SEEEEECTTSHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHH--HHHHHCCCCEEEEEECCCHHHHHHHHHh---cC------CCC-CeEEEECCCchHHHHcCccccc
Confidence 89 8999999999 699999999 999999999999999986 54 310 4999999999999999997421
Q ss_pred --CCC---cceEEEEECCCCcEEEEEeecCCCCC---CHHHHHHH
Q psy17183 80 --AGH---SLRAYYIIDKRGYLRSMNVSDIQVGR---NLKEILRQ 116 (145)
Q Consensus 80 --~g~---~~p~tfIID~dG~I~~~~~~~~~~~~---~~~ell~~ 116 (145)
.|+ ..|++|||| +|+|++.++++ +.++ +.+++++.
T Consensus 119 ~~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~~~~~~~vl~~ 161 (162)
T 1tp9_A 119 QEKGLGTRSRRFALLVD-DLKVKAANIEG-GGEFTVSSAEDILKD 161 (162)
T ss_dssp TTTTSEEEECCEEEEEE-TTEEEEEEECS-SSCCSSCSHHHHHTT
T ss_pred ccCCCCccceeEEEEEE-CCEEEEEEeeC-CCCCccCCHHHHHhh
Confidence 242 479999999 99999999988 6554 47777653
No 42
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.73 E-value=3.2e-17 Score=120.97 Aligned_cols=114 Identities=17% Similarity=0.316 Sum_probs=90.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC--------CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHh
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV--------DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTY 73 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~--------D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~y 73 (145)
|..+++.|++++ ++|..+ +++|+||. |+.+..++|++. ++ + +||++.|.++++++.|
T Consensus 48 C~~~~~~l~~l~--~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 48 VKGSIGELVALA--ERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEE---HG------I---FFPYLLDETQEVAKAY 112 (188)
T ss_dssp HHTTHHHHHHHH--HHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHH---HT------C---CSCEEECSSSHHHHHT
T ss_pred HHHHHHHHHHHH--HHhhcC-eEEEEEEcCccccccccCHHHHHHHHHH---hC------C---CceEEECCcchHHHHc
Confidence 889999999999 689877 99999998 677888888886 76 8 9999999999999999
Q ss_pred CCCccCCCCcceEEEEECCCCcEEEEEeecCC------CCCCHHHHHHHHHhccccc------cCCcccCCCCCCCC
Q psy17183 74 GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQ------VGRNLKEILRQVEAFQLVD------STDTQCPVNWTTGQ 138 (145)
Q Consensus 74 g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~------~~~~~~ell~~i~~l~~~~------~~~~~~p~~w~~~~ 138 (145)
|+. ..|++||||++|+|++. +... ...+.+++.+.|+++.... ..+.+||++|.+|+
T Consensus 113 ~v~------~~P~~~lid~~G~i~~~--g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~~~~~~~~gc~~~~~~~~ 181 (188)
T 2cvb_A 113 RAL------RTPEVFLFDERRLLRYH--GRVNDNPKDPSKVQSHDLEAAIEALLRGEEPPLKEAPAIGCTIKWRPGN 181 (188)
T ss_dssp TCC------EESEEEEECTTCBEEEE--ECSSSCTTCGGGCCCCHHHHHHHHHHTTCCCCSSCCCCCSEECCCCTTC
T ss_pred CCC------CCCeEEEECCCCcEEEE--EecCCccccccccCHHHHHHHHHHHHcCCCCCcccCCCCceEEEecCCC
Confidence 987 37999999999999988 3321 1113456666666554322 23478999999884
No 43
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.72 E-value=2.1e-17 Score=120.36 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=84.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC-chHHHHHhCCCccC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS-THAISKTYGCYLSS 79 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~-~~~va~~yg~~~~~ 79 (145)
.|+.|++.|++++ ++| .|++||+||.|+++.+++|+++ ++ ++ +||+++|. +++++++||+....
T Consensus 58 ~C~~e~~~l~~~~--~~~--~~v~vv~Is~d~~~~~~~~~~~---~~------~~--~~~~l~D~~~~~~~~~~gv~~~~ 122 (165)
T 1q98_A 58 VCATSVRKFNQQA--AKL--SNTIVLCISADLPFAQARFCGA---EG------IE--NAKTVSTFRNHALHSQLGVDIQT 122 (165)
T ss_dssp CCCHHHHHHHHHH--HHS--TTEEEEEEESSCHHHHTTCTTT---TT------CT--TEEEEECTTCTHHHHHTTCEECS
T ss_pred ccHHHHHHHHHHH--HHc--CCCEEEEEeCCCHHHHHHHHHH---cC------CC--ceEEeeccccchHHHHhCceecc
Confidence 4999999999999 578 7999999999999998888875 54 51 49999998 89999999997432
Q ss_pred ---CCCcceEEEEECCCCcEEEEEeecC-CCCCCHHHHHHHH
Q psy17183 80 ---AGHSLRAYYIIDKRGYLRSMNVSDI-QVGRNLKEILRQV 117 (145)
Q Consensus 80 ---~g~~~p~tfIID~dG~I~~~~~~~~-~~~~~~~ell~~i 117 (145)
.|...|++||||++|+|++.+.+.. ...++.+++++.|
T Consensus 123 ~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l 164 (165)
T 1q98_A 123 GPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVL 164 (165)
T ss_dssp STTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTT
T ss_pred cccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhh
Confidence 2445699999999999999998643 3456788888765
No 44
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.71 E-value=1.1e-16 Score=116.88 Aligned_cols=103 Identities=19% Similarity=0.270 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec-CchHHHHHhCCCccC-
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD-STHAISKTYGCYLSS- 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD-~~~~va~~yg~~~~~- 79 (145)
|+.|++.|++++ ++| .+++||+||.|+++.+++|+++ ++ +. +||+++| .++++ ++||+....
T Consensus 63 C~~~~~~l~~~~--~~~--~~v~vv~Is~d~~~~~~~~~~~---~~------~~--~~~~l~D~~~~~~-~~~gv~~~~~ 126 (171)
T 2yzh_A 63 CETETKKFNEIM--AGM--EGVDVTVVSMDLPFAQKRFCES---FN------IQ--NVTVASDFRYRDM-EKYGVLIGEG 126 (171)
T ss_dssp HHHHHHHHHHHT--TTC--TTEEEEEEESSCHHHHHHHHHH---TT------CC--SSEEEECTTTCGG-GGGTCBBCSS
T ss_pred hHHHHHHHHHHH--HHc--CCceEEEEeCCCHHHHHHHHHH---cC------CC--CeEEeecCccCcH-HHhCCEeccc
Confidence 999999999999 578 7999999999999999999986 64 42 5999999 89999 999997532
Q ss_pred --CCCcceEEEEECCCCcEEEEEeecCC-CCCCHHHHHHHHHhc
Q psy17183 80 --AGHSLRAYYIIDKRGYLRSMNVSDIQ-VGRNLKEILRQVEAF 120 (145)
Q Consensus 80 --~g~~~p~tfIID~dG~I~~~~~~~~~-~~~~~~ell~~i~~l 120 (145)
.|...|++||||++|+|++.+.++.. ...+.+++++.|++|
T Consensus 127 ~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 127 ALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 25557999999999999999987543 345789999999876
No 45
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.71 E-value=4.4e-17 Score=123.16 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=86.4
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC-chHHHHHhCCCccC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS-THAISKTYGCYLSS 79 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~-~~~va~~yg~~~~~ 79 (145)
.|+.|++.|++++ ++| .|++||+||.|+++..++|+++ ++ +. +||+++|. +++++++||+....
T Consensus 93 ~C~~e~~~l~~l~--~~~--~~v~vv~Is~D~~~~~~~~~~~---~~------~~--~f~~l~D~~~~~~~~~ygv~~~~ 157 (200)
T 3zrd_A 93 VCAASVRKFNQLA--GEL--ENTVVLCISSDLPFAQSRFCGA---EG------LS--NVITLSTLRGADFKQAYGVAITE 157 (200)
T ss_dssp CCCHHHHHHHHHH--HTS--TTEEEEEEESSCHHHHTTCTTT---TT------CT--TEEEEETTSCTHHHHHTTCEECS
T ss_pred hhHHHHHHHHHHH--HHh--CCCEEEEEECCCHHHHHHHHHH---cC------CC--CceEEecCchHHHHHHhCceeec
Confidence 4999999999999 588 7999999999999999998775 43 32 69999999 99999999997543
Q ss_pred ---CCCcceEEEEECCCCcEEEEEeecC-CCCCCHHHHHHHHH
Q psy17183 80 ---AGHSLRAYYIIDKRGYLRSMNVSDI-QVGRNLKEILRQVE 118 (145)
Q Consensus 80 ---~g~~~p~tfIID~dG~I~~~~~~~~-~~~~~~~ell~~i~ 118 (145)
.|...|++||||++|+|++.+++.. ...++.++++++|+
T Consensus 158 ~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 158 GPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp STTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred ccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhhC
Confidence 3556799999999999999998763 44567888888763
No 46
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.68 E-value=1.8e-16 Score=114.32 Aligned_cols=103 Identities=22% Similarity=0.239 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC-C
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS-A 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~-~ 80 (145)
|+.|+|.|++++ ++|+++| +||+||.|+++.+++|+++ ++ + +||+++|.++++++.||+.... .
T Consensus 51 C~~~~~~l~~~~--~~~~~~~-~vv~is~d~~~~~~~~~~~---~~------~---~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 51 STRQASGFRDNY--QELKEYA-AVFGLSADSVTSQKKFQSK---QN------L---PYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp HHHHHHHHHHHH--HHHTTTC-EEEEEESCCHHHHHHHHHH---HT------C---SSEEEECTTCHHHHHHTCBSSSSS
T ss_pred HHHHHHHHHHHH--HHHHhCC-cEEEEeCCCHHHHHHHHHH---hC------C---CceEEECCccHHHHHhCCcccccC
Confidence 999999999999 6899999 9999999999999999986 76 8 9999999999999999997421 2
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCC---CCCHHHHHHHHHhcc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQV---GRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~---~~~~~ell~~i~~l~ 121 (145)
| ..|++||| ++|+|++.+.+..+. .+..+++++.+++++
T Consensus 116 g-~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 157 (159)
T 2a4v_A 116 G-SIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKFK 157 (159)
T ss_dssp C-BCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHHHTT
T ss_pred C-ccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHHHhh
Confidence 3 36799999 999999999875321 223455555555553
No 47
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.63 E-value=6.6e-16 Score=111.84 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec-CchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD-STHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD-~~~~va~~yg~~~~~~ 80 (145)
|..+++.|++++ ++| .++++|+||.|+++..++|++. ++ +. +||+++| .++++++.||+.....
T Consensus 60 C~~~~~~l~~l~--~~~--~~~~vv~is~d~~~~~~~~~~~---~~------~~--~~~~~~d~~~~~~~~~~~v~~~~~ 124 (167)
T 2jsy_A 60 CDAQTRRFNEEA--AKL--GDVNVYTISADLPFAQARWCGA---NG------ID--KVETLSDHRDMSFGEAFGVYIKEL 124 (167)
T ss_dssp HHHTHHHHHHHH--HHH--SSCEEEEEECSSGGGTSCCGGG---SS------CT--TEEEEEGGGTCHHHHHTTCBBTTT
T ss_pred hHHHHHHHHHHH--HHc--CCCEEEEEECCCHHHHHHHHHh---cC------CC--CceEeeCCchhHHHHHhCCccccC
Confidence 899999999999 578 7899999999998888888775 54 32 6999999 8999999999985444
Q ss_pred CCcceEEEEECCCCcEEEEEeecCC-CCCCHHHHHHHHHhcc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQ-VGRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~-~~~~~~ell~~i~~l~ 121 (145)
|...|++||||++|+|++.+.+... ...+.+++++.|++|.
T Consensus 125 g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 125 RLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 5557999999999999999987643 2346789999998764
No 48
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.59 E-value=7.4e-15 Score=107.89 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=81.0
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC-
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS- 79 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~- 79 (145)
.|..+++.|+++++ + .+++||+||.|+++..++|+++ ++ +. +||+++|.++++++.||+....
T Consensus 59 ~C~~~~~~l~~l~~--~---~~v~vv~Is~D~~~~~~~~~~~---~~------~~--~~~~l~D~~~~~~~~~gv~~~~~ 122 (175)
T 1xvq_A 59 VCATSVRTFDERAA--A---SGATVLCVSKDLPFAQKRFCGA---EG------TE--NVMPASAFRDSFGEDYGVTIADG 122 (175)
T ss_dssp CCCHHHHHHHHHHH--H---TTCEEEEEESSCHHHHTTCC-----------------CEEEEECTTSSHHHHTTCBBCSS
T ss_pred hHHHHHHHHHHHHh--h---cCCEEEEEECCCHHHHHHHHHH---cC------CC--CceEeeCCHHHHHHHhCCccccc
Confidence 49999999999994 4 7899999999999999888875 54 41 5999999999999999997531
Q ss_pred --CCCcceEEEEECCCCcEEEEEeec-CCCCCCHHHHHHHHHh
Q psy17183 80 --AGHSLRAYYIIDKRGYLRSMNVSD-IQVGRNLKEILRQVEA 119 (145)
Q Consensus 80 --~g~~~p~tfIID~dG~I~~~~~~~-~~~~~~~~ell~~i~~ 119 (145)
.|...|++||||++|+|++.+.+. .....+++++++.+++
T Consensus 123 ~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~ 165 (175)
T 1xvq_A 123 PMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 165 (175)
T ss_dssp TTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred ccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHh
Confidence 344569999999999999999853 3334578888887764
No 49
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.59 E-value=1.4e-14 Score=103.08 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=84.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC---chHHHHHhC--CC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS---THAISKTYG--CY 76 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~---~~~va~~yg--~~ 76 (145)
|..+++.|.+++ ++|+..++++++|+.|+.+..++|+++ ++ + +||++.|. ..++++.|| +.
T Consensus 39 C~~~~~~l~~l~--~~~~~~~v~vv~v~~d~~~~~~~~~~~---~~------~---~~~~~~~~~~~~~~~~~~~~~~v~ 104 (151)
T 3raz_A 39 CRKEMPAMSKWY--KAQKKGSVDMVGIALDTSDNIGNFLKQ---TP------V---SYPIWRYTGANSRNFMKTYGNTVG 104 (151)
T ss_dssp HHHHHHHHHHHH--HTSCTTTEEEEEEESSCHHHHHHHHHH---SC------C---SSCEEEECCSCHHHHHHTTTCCSC
T ss_pred HHHHHHHHHHHH--HHhccCCeEEEEEECCChHHHHHHHHH---cC------C---CCceEecCccchHHHHHHhCCccC
Confidence 899999999999 689889999999999999999999886 76 8 99999887 566888898 44
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccccc
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDS 125 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~ 125 (145)
..|++||||++|+|++.+.|.. +.+++.+.|+++....+
T Consensus 105 ------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 105 ------VLPFTVVEAPKCGYRQTITGEV----NEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp ------CSSEEEEEETTTTEEEECCSCC----CHHHHHHHHHHHHTC--
T ss_pred ------CCCEEEEECCCCcEEEEECCCC----CHHHHHHHHHHHHHHhh
Confidence 4799999999999999887764 46788888888876543
No 50
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.58 E-value=2.4e-14 Score=102.04 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=83.6
Q ss_pred hhHH-HHHHHHHhhhhhhhcCCcEEEEEeC-------CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchH-----
Q psy17183 2 DTKI-ACDVLKLVRKEILIVSPFQIIAVSV-------DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHA----- 68 (145)
Q Consensus 2 ~t~e-~~~~~~~~~~~~f~~~gv~vi~VS~-------D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~----- 68 (145)
|..| ++.|++++ ++|..+|+.+++||. |+.+..++|.++ ++ + +||++.|..+.
T Consensus 45 C~~e~~~~l~~l~--~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~ 110 (160)
T 3lor_A 45 CVNHGVPQAQKIH--RMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDE---FG------I---KFPVAVDMPREGQRIP 110 (160)
T ss_dssp HHHTHHHHHHHHH--HHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH---TT------C---CSCEEEECCCTTCSSC
T ss_pred hhhhhhHHHHHHH--HHhCcCCcEEEEEeccccccccCCHHHHHHHHHH---cC------C---CCcEEECCccccchhh
Confidence 8886 99999999 689989999999997 688889999886 76 8 99999999998
Q ss_pred -HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 69 -ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 69 -va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+++.||+. ..|++||||++|+|++.+.|.. +.+++.+.|+++-
T Consensus 111 ~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 154 (160)
T 3lor_A 111 STMKKYRLE------GTPSIILADRKGRIRQVQFGQV----DDFVLGLLLGSLL 154 (160)
T ss_dssp HHHHHTTCC------SSSEEEEECTTSBEEEEEESCC----CHHHHHHHHHHHH
T ss_pred hHHHhcccC------ccceEEEECCCCcEEEEecCcC----CHHHHHHHHHHHH
Confidence 99999987 3799999999999999988874 3567777777664
No 51
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.58 E-value=3.2e-14 Score=100.78 Aligned_cols=104 Identities=18% Similarity=0.320 Sum_probs=85.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCC--HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDS--HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~--~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~ 79 (145)
|..+++.|.+++ ++|...++.+++|+.|. .+..++|.+. ++ + +||+++|.++.+++.||+.
T Consensus 43 C~~~~~~l~~~~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~--- 105 (154)
T 3kcm_A 43 CREEIPSMMRLN--AAMAGKPFRMLCVSIDEGGKVAVEEFFRK---TG------F---TLPVLLDADKRVGKLYGTT--- 105 (154)
T ss_dssp HHHHHHHHHHHH--HHTTTSSEEEEEEECCTTHHHHHHHHHHH---HC------C---CCCEEECTTCHHHHHHTCC---
T ss_pred HHHHHHHHHHHH--HHhccCCeEEEEEEcCCcchHHHHHHHHH---cC------C---CeeEEecCchHHHHHhCCC---
Confidence 899999999998 68988899999999986 6777888876 76 8 9999999999999999997
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCC
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTD 127 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~ 127 (145)
..|++||||++|+|++.+.|... .+.+++.+.|+++......+
T Consensus 106 ---~~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l~~~~~~~ 148 (154)
T 3kcm_A 106 ---GVPETFVIDRHGVILKKVVGAME--WDHPEVIAFLNNELSKAREG 148 (154)
T ss_dssp ---SBCEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTC-------
T ss_pred ---CCCeEEEECCCCcEEEEEcCCCc--cccHHHHHHHHHHHHHhhhc
Confidence 37999999999999999988753 34578999999888665443
No 52
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.58 E-value=2.8e-14 Score=101.71 Aligned_cols=96 Identities=13% Similarity=0.097 Sum_probs=83.4
Q ss_pred hhHH-HHHHHHHhhhhhhhcCCcEEEEEeC-------CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCch-----H
Q psy17183 2 DTKI-ACDVLKLVRKEILIVSPFQIIAVSV-------DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTH-----A 68 (145)
Q Consensus 2 ~t~e-~~~~~~~~~~~~f~~~gv~vi~VS~-------D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~-----~ 68 (145)
|..| ++.|++++ ++|...++.+|+||. ++.+..++|+++ ++ + +||++.|.++ +
T Consensus 43 C~~~~~~~l~~l~--~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~ 108 (158)
T 3eyt_A 43 CVMHGIPLAQKVR--AAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHE---YR------I---KFPVGVDQPGDGAMPR 108 (158)
T ss_dssp HHHTHHHHHHHHH--HHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH---TT------C---CSCEEEECCCSSSSCH
T ss_pred hhhhhhHHHHHHH--HHhCcCCEEEEEEEecccccccCCHHHHHHHHHH---cC------C---CceEEEcCccchhhHH
Confidence 8897 99999999 689888999999995 588889999886 76 8 9999999988 7
Q ss_pred HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 69 ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 69 va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+++.||+. ..|++||||++|+|++.+.|.. +.+++.+.|+++-
T Consensus 109 ~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 151 (158)
T 3eyt_A 109 TMAAYQMR------GTPSLLLIDKAGDLRAHHFGDV----SELLLGAEIATLL 151 (158)
T ss_dssp HHHHTTCC------SSSEEEEECTTSEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred HHHHcCCC------CCCEEEEECCCCCEEEEEeCCC----CHHHHHHHHHHHh
Confidence 99999987 3799999999999999988864 3677777777765
No 53
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.57 E-value=6.3e-14 Score=99.07 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|...|+++++|+.| +.+..++|.+. ++ + +||+++|.++++++.||+.
T Consensus 43 C~~~~~~l~~l~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~---- 104 (152)
T 3gl3_A 43 CRQSFPWMNQMQ--AKYKAKGFQVVAVNLDAKTGDAMKFLAQ---VP------A---EFTVAFDPKGQTPRLYGVK---- 104 (152)
T ss_dssp HHHHHHHHHHHH--HHHGGGTEEEEEEECCSSHHHHHHHHHH---SC------C---CSEEEECTTCHHHHHTTCC----
T ss_pred HHHHHHHHHHHH--HHhhcCCeEEEEEECCCCHHHHHHHHHH---cC------C---CCceeECCcchhHHHcCCC----
Confidence 899999999999 6899999999999998 56667778775 76 8 9999999999999999997
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
..|++||||++|+|++.+.|..+ .+.+++.+.|+++....
T Consensus 105 --~~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 105 --GMPTSFLIDRNGKVLLQHVGFRP--ADKEALEQQILAALGGN 144 (152)
T ss_dssp --SSSEEEEECTTSBEEEEEESCCT--TTHHHHHHHHHHHTC--
T ss_pred --CCCeEEEECCCCCEEEEEccCCC--cCHHHHHHHHHHHHccc
Confidence 37999999999999999988643 35788888888877543
No 54
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.56 E-value=1.2e-14 Score=109.16 Aligned_cols=119 Identities=13% Similarity=0.186 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHhhhhhhhc---CCcEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec---CchHHHH
Q psy17183 2 DTKIACDVLKLVRKEILIV---SPFQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD---STHAISK 71 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~---~gv~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD---~~~~va~ 71 (145)
|..+++.|++++ ++|.+ .+++||+||.| +++.+++|++. ++ . +|+++.+ ..+++++
T Consensus 57 C~~~~~~l~~l~--~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~---~~------~---~~~~l~~~~d~~~~~~~ 122 (200)
T 2b7k_A 57 CPDELDKLGLWL--NTLSSKYGITLQPLFITCDPARDSPAVLKEYLSD---FH------P---SILGLTGTFDEVKNACK 122 (200)
T ss_dssp HHHHHHHHHHHH--HHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTT---SC------T---TCEEEECCHHHHHHHHH
T ss_pred hHHHHHHHHHHH--HHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHH---cC------C---CceEEeCCHHHHHHHHH
Confidence 999999999998 57874 48999999998 68888999875 65 6 8988874 4678999
Q ss_pred HhCCCccC-----CC-----CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCC
Q psy17183 72 TYGCYLSS-----AG-----HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWT 135 (145)
Q Consensus 72 ~yg~~~~~-----~g-----~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~ 135 (145)
.||+.... .| ...|++||||++|+|++.+.+..+.....+++.+.|++++. ..+.+.|+.+|-
T Consensus 123 ~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l~~-~~~~~~~~~~~~ 195 (200)
T 2b7k_A 123 KYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVP-AEQRAKQKEAWY 195 (200)
T ss_dssp HTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHCCC-C-----------
T ss_pred HcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHhhh-hhhcchhHHHHH
Confidence 99987210 01 12468999999999999987765443445777778888775 456788999996
No 55
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.53 E-value=8.8e-14 Score=100.54 Aligned_cols=105 Identities=11% Similarity=0.144 Sum_probs=84.2
Q ss_pred ChhHHHHHHHHHhhhhhhhcCC--cEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCc---cEEecCchHHHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSP--FQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIV---PLLSDSTHAISK 71 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~g--v~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~f---pllsD~~~~va~ 71 (145)
.|..+++.|.+++ ++|.+.| ++||+||.| +++.+++|+++ ++ + +| |+++|.++++++
T Consensus 48 ~C~~~~~~l~~l~--~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~---~~------~---~~~~~~~l~d~~~~~~~ 113 (174)
T 1xzo_A 48 ICPPMTAHMTDLQ--KKLKAENIDVRIISFSVDPENDKPKQLKKFAAN---YP------L---SFDNWDFLTGYSQSEIE 113 (174)
T ss_dssp CCCSHHHHHHHHH--HHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT---SC------C---CGGGEEEEBCSCHHHHH
T ss_pred hhHHHHHHHHHHH--HHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHH---cC------C---CCcceEEEeCCCHHHHH
Confidence 3889999999998 6888876 999999986 67888888875 66 7 88 999999999998
Q ss_pred HhCCC-----c---c--CCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 72 TYGCY-----L---S--SAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 72 ~yg~~-----~---~--~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|++. . . ......|++||||++|+|++.+.+... .+.+++++.|++|.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 114 EFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVEN--TPYDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSS--CCHHHHHHHHHHHT
T ss_pred HHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCC--CCHHHHHHHHHHHH
Confidence 88741 0 0 011357899999999999999988643 35788999888775
No 56
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=6.7e-14 Score=99.36 Aligned_cols=92 Identities=13% Similarity=0.203 Sum_probs=77.4
Q ss_pred hhHHHHHHHHHhhhhhh-hcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC---chHHHHHhCCC
Q psy17183 2 DTKIACDVLKLVRKEIL-IVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS---THAISKTYGCY 76 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f-~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~---~~~va~~yg~~ 76 (145)
|..+++.|.+++ ++| +..|+++++||.|+ .+..++|.+. ++ + +||+++|. ++++++.||+.
T Consensus 50 C~~~~~~l~~l~--~~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~~v~ 115 (150)
T 3fw2_A 50 QKQSNSELREIY--KKYKKNKYIGMLGISLDVDKQQWKDAIKR---DT------L---DWEQVCDFGGLNSEVAKQYSIY 115 (150)
T ss_dssp HHHHHHHHHHHH--HHHTTCSSEEEEEEECCSCHHHHHHHHHH---TT------C---CSEEECCSCGGGCHHHHHTTCC
T ss_pred HHHHHHHHHHHH--HHhccCCCeEEEEEEcCCCHHHHHHHHHH---hC------C---CceEEEcCcccchHHHHHcCCC
Confidence 999999999999 689 88899999999985 4677777775 76 8 99999999 77999999987
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
..|++||||++|+|++.+. +.+++.+.|+++
T Consensus 116 ------~~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~l 146 (150)
T 3fw2_A 116 ------KIPANILLSSDGKILAKNL-------RGEELKKKIENI 146 (150)
T ss_dssp ------SSSEEEEECTTSBEEEESC-------CHHHHHHHHHHH
T ss_pred ------ccCeEEEECCCCEEEEccC-------CHHHHHHHHHHH
Confidence 3799999999999998874 245666666554
No 57
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.52 E-value=8.4e-14 Score=98.12 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCc-cEEecCc---hHHHHHhCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIV-PLLSDST---HAISKTYGCY 76 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~f-pllsD~~---~~va~~yg~~ 76 (145)
|..+++.|.+++ ++|+..|++||+||.| +.+..++|.++ ++ + +| ++++|.. +++++.||+.
T Consensus 47 C~~~~~~l~~l~--~~~~~~~~~vv~vs~d~~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~~~~v~ 112 (143)
T 4fo5_A 47 SRARNVQLANEV--NKFGPDKIAMCSISMDEKESIFTETVKI---DK------L---DLSTQFHEGLGKESELYKKYDLR 112 (143)
T ss_dssp HHHHHHHHHHHH--TTSCTTTEEEEEEECCSCHHHHHHHHHH---HT------C---CGGGEEECTTGGGSHHHHHTTGG
T ss_pred HHHHHHHHHHHH--HHhCcCCEEEEEEEccCCHHHHHHHHHH---hC------C---CCceeeecccccchHHHHHcCCC
Confidence 899999999999 6899889999999998 55567777765 76 8 89 8999984 6899999997
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
..|++||||++|+|++...+ .+++.+.|+.
T Consensus 113 ------~~P~~~lid~~G~i~~~~~~-------~~~l~~~l~~ 142 (143)
T 4fo5_A 113 ------KGFKNFLINDEGVIIAANVT-------PEKLTEILKA 142 (143)
T ss_dssp ------GCCCEEEECTTSBEEEESCC-------HHHHHHHHTC
T ss_pred ------CCCcEEEECCCCEEEEccCC-------HHHHHHHHHh
Confidence 47999999999999987543 3566666654
No 58
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.50 E-value=1.9e-13 Score=100.24 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCH--HHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSH--LAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~--~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~ 79 (145)
|..+++.|++++ ++|...+++|++||.|.. +..++|.++ ++ ++ .||+++|.++.+++.|++...
T Consensus 75 C~~~~~~l~~l~--~~~~~~~~~vv~v~~d~~~~~~~~~~~~~---~~------~~--~~~~~~d~~~~~~~~~~~~~~- 140 (186)
T 1jfu_A 75 CRKEMPALDELQ--GKLSGPNFEVVAINIDTRDPEKPKTFLKE---AN------LT--RLGYFNDQKAKVFQDLKAIGR- 140 (186)
T ss_dssp HHHHHHHHHHHH--HHHCBTTEEEEEEECCCSCTTHHHHHHHH---TT------CC--TTCCEECTTCHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHH--HHhccCCcEEEEEECCCCCHHHHHHHHHH---cC------CC--CCceEECCcchHHHHhccccc-
Confidence 899999999999 588888999999999853 677888886 65 51 499999999999999998632
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
....|++||||++|+|++.+.|... .+.+++++.|+++.
T Consensus 141 -~~~~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 141 -ALGMPTSVLVDPQGCEIATIAGPAE--WASEDALKLIRAAT 179 (186)
T ss_dssp -CSSSSEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHHHH
T ss_pred -cCCCCEEEEECCCCCEEEEEecCCc--cCHHHHHHHHHHHh
Confidence 1247999999999999999887643 34578888887775
No 59
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.49 E-value=4.3e-13 Score=94.93 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|...++.+++|+.| +.+..++|.+. ++ + +||++.|.++.+++.||+.
T Consensus 41 C~~~~~~l~~~~--~~~~~~~v~vv~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~---- 102 (151)
T 2f9s_A 41 CKKEFPYMANQY--KHFKSQGVEIVAVNVGESKIAVHNFMKS---YG------V---NFPVVLDTDRQVLDAYDVS---- 102 (151)
T ss_dssp HHHHHHHHHHHH--HHHGGGTEEEEEEEESCCHHHHHHHHHH---HT------C---CSCEEEETTSHHHHHTTCC----
T ss_pred HHHHHHHHHHHH--HHhccCCeEEEEEECCCCHHHHHHHHHH---cC------C---CceEEECCchHHHHhcCCC----
Confidence 899999999998 6898889999999986 56778888876 76 8 9999999999999999987
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
..|++||||++|+|++.+.|.. +.+++.+.|+++..
T Consensus 103 --~~P~~~lid~~G~i~~~~~G~~----~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 103 --PLPTTFLINPEGKVVKVVTGTM----TESMIHDYMNLIKP 138 (151)
T ss_dssp --SSCEEEEECTTSEEEEEEESCC----CHHHHHHHHHHHSC
T ss_pred --CCCeEEEECCCCcEEEEEeCCC----CHHHHHHHHHHHHh
Confidence 3799999999999999888763 46788888887764
No 60
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.49 E-value=2.9e-13 Score=99.15 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCc------EEEEEeCCC--HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHh
Q psy17183 2 DTKIACDVLKLVRKEILIVSPF------QIIAVSVDS--HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTY 73 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv------~vi~VS~D~--~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~y 73 (145)
|..+++.|++++ ++|..+|+ ++++|+.|. .+..++|.+. ++ + +||+++|.++.+++.|
T Consensus 74 C~~~~~~l~~l~--~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~ 139 (183)
T 3lwa_A 74 CRSESDDLQIIH--EELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTD---NG------L---DYPSIYDPPFMTAASL 139 (183)
T ss_dssp HHHHHHHHHHHH--HHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHH---TT------C---CSCEEECTTCGGGGGT
T ss_pred HHHHHHHHHHHH--HHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHH---cC------C---CccEEECCcchHHHHh
Confidence 899999999999 68999999 999999986 8888899886 76 8 9999999999999999
Q ss_pred CCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 74 GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 74 g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|.+. -...|++||||++|+|++.+.+.. +.+++.+.|+++.
T Consensus 140 ~~~~---v~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll 180 (183)
T 3lwa_A 140 GGVP---ASVIPTTIVLDKQHRPAAVFLREV----TSKDVLDVALPLV 180 (183)
T ss_dssp TTCC---TTCCSEEEEECTTSCEEEEECSCC----CHHHHHHHHHHHH
T ss_pred ccCC---CCCCCeEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHH
Confidence 8531 114799999999999999988763 4678888777653
No 61
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.48 E-value=6.2e-13 Score=92.53 Aligned_cols=92 Identities=10% Similarity=0.210 Sum_probs=79.6
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCc
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~ 77 (145)
|..+++.|.+++ ++|...++.+++|+.| +.+..++|.+. ++ + +||++.|.++.+++.|++.
T Consensus 49 C~~~~~~l~~~~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~- 113 (145)
T 3erw_A 49 CKKELPQFQSFY--DAHPSDSVKLVTVNLVNSEQNQQVVEDFIKA---NK------L---TFPIVLDSKGELMKEYHII- 113 (145)
T ss_dssp HHHHHHHHHHHH--HHCCCSSEEEEEEECGGGSSCHHHHHHHHHH---TT------C---CSCEEECSSSHHHHHTTCC-
T ss_pred HHHHHHHHHHHH--HHcCCCCEEEEEEEccCCcCCHHHHHHHHHH---cC------C---ceeEEEcCchhHHHhcCcC-
Confidence 899999999999 5888789999999985 67788888876 76 8 9999999999999999987
Q ss_pred cCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 78 SSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 78 ~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
..|++||||++|+|++.+.|.. +.+++.+.|
T Consensus 114 -----~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l 144 (145)
T 3erw_A 114 -----TIPTSFLLNEKGEIEKTKIGPM----TAEQLKEWT 144 (145)
T ss_dssp -----EESEEEEECTTCCEEEEEESCC----CHHHHHHHH
T ss_pred -----ccCeEEEEcCCCcEEEEEcCCc----CHHHHHHhh
Confidence 4799999999999999888764 356666655
No 62
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.48 E-value=3.8e-13 Score=94.15 Aligned_cols=93 Identities=11% Similarity=0.106 Sum_probs=76.5
Q ss_pred hhHHHHHHHH---HhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHH--HhCC
Q psy17183 2 DTKIACDVLK---LVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISK--TYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~---~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~--~yg~ 75 (145)
|..+++.|.+ ++ ++|+..|+++++||.| +.+..++|.+. ++ + +||+++|.++.++. .||+
T Consensus 42 C~~~~~~l~~~~~l~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~v 107 (142)
T 3ewl_A 42 CRKFEKLFAEIPAFV--EMVENGTLRVLAIYPDENREEWATKAVY---MP------Q---GWIVGWNKAGDIRTRQLYDI 107 (142)
T ss_dssp HHHHHHHHHTCHHHH--HHHHHTSEEEEEEECSSCHHHHHHHHTT---SC------T---TCEEEECTTCHHHHTTCSCC
T ss_pred HHHHHHHHHHhHHHH--HHhccCCeEEEEEEecCCHHHHHHHHHH---cC------C---CcceeeCCccchhhHHHcCC
Confidence 8899999988 77 5888899999999998 56677777764 76 8 99999999999987 8998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
. ..|++||||++|+|++.. .+.+++.+.|++++
T Consensus 108 ~------~~P~~~lid~~G~i~~~~-------~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 108 R------ATPTIYLLDGRKRVILKD-------TSMEQLIDYLATQA 140 (142)
T ss_dssp C------SSSEEEEECTTCBEEECS-------CCHHHHHHHHHC--
T ss_pred C------CCCeEEEECCCCCEEecC-------CCHHHHHHHHHHHc
Confidence 7 379999999999998721 34678888887654
No 63
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.48 E-value=3.3e-13 Score=96.46 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=79.7
Q ss_pred hhHHHHHHHHHhhhhhhhc----CCcEEEEEeCCC----HHHHHHHHHHHhhcCCCCCCCCCCCCccEEe---cCchHHH
Q psy17183 2 DTKIACDVLKLVRKEILIV----SPFQIIAVSVDS----HLAHLAWTKTLTATSSNRSAIDPSKIVPLLS---DSTHAIS 70 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~----~gv~vi~VS~D~----~~~~~~~~~~~~~~~~~~~~~~~~~~fplls---D~~~~va 70 (145)
|..+++.|++++ ++|+. .+++|++||.|+ ++..++|++. ++ + +||++. |..++++
T Consensus 39 C~~~~~~l~~l~--~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~---~~------~---~~~~l~~~~d~~~~~~ 104 (164)
T 2ggt_A 39 CPEELEKMIQVV--DEIDSITTLPDLTPLFISIDPERDTKEAIANYVKE---FS------P---KLVGLTGTREEVDQVA 104 (164)
T ss_dssp HHHHHHHHHHHH--HHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHT---TC------S---SCEEEECCHHHHHHHH
T ss_pred hHHHHHHHHHHH--HHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHH---cC------C---CeEEEeCCHHHHHHHH
Confidence 999999999999 58876 599999999875 7788899886 66 7 899994 6678899
Q ss_pred HHhCCCccC-----CC----CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 71 KTYGCYLSS-----AG----HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 71 ~~yg~~~~~-----~g----~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.||+...- .+ ...|++||||++|+|++.+.+.. +.+++.+.|+++.
T Consensus 105 ~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll 160 (164)
T 2ggt_A 105 RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK----RKGEIAASIATHM 160 (164)
T ss_dssp HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC----CHHHHHHHHHHHH
T ss_pred HhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC----CHHHHHHHHHHHH
Confidence 999987310 00 00128999999999999987653 4678888887764
No 64
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.47 E-value=7.7e-13 Score=93.50 Aligned_cols=98 Identities=14% Similarity=0.212 Sum_probs=83.9
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEe--CCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVS--VDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
.|..+++.|++++ ++|...++.+++|+ .|+.+..++|.+. ++ + +||++.|.+.++++.||+.
T Consensus 42 ~C~~~~~~l~~l~--~~~~~~~~~vv~v~~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~i~-- 105 (153)
T 2l5o_A 42 GCVSEMPKIIKTA--NDYKNKNFQVLAVAQPIDPIESVRQYVKD---YG------L---PFTVMYDADKAVGQAFGTQ-- 105 (153)
T ss_dssp THHHHHHHHHHHH--HHGGGTTEEEEEEECTTSCHHHHHHHHHH---TT------C---CSEEEECSSCHHHHHHTCC--
T ss_pred cHHHHHHHHHHHH--HHhccCCeEEEEEecCCCCHHHHHHHHHH---cC------C---CceEEcCchHHHHHHcCCC--
Confidence 3899999999998 68998899999999 5688888898886 76 8 9999999999999999987
Q ss_pred CCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 79 SAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 79 ~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
..|++||||++|+|++.+.|. .+.+++.+.|+++-.
T Consensus 106 ----~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 106 ----VYPTSVLIGKKGEILKTYVGE----PDFGKLYQEIDTAWR 141 (153)
T ss_dssp ----SSSEEEEECSSSCCCEEEESS----CCHHHHHHHHHHHHH
T ss_pred ----ccCeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHHH
Confidence 379999999999999988775 346777777776643
No 65
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.46 E-value=9.7e-13 Score=94.74 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=81.1
Q ss_pred ChhHHHHHHHHHhhhhhhhc----CCcEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC---chHH
Q psy17183 1 MDTKIACDVLKLVRKEILIV----SPFQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS---THAI 69 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~----~gv~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~---~~~v 69 (145)
.|..+++.|++++ ++|.+ .+++||+||.| +++..++|++. ++ + +|++++|. .+.+
T Consensus 41 ~C~~~~~~l~~l~--~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~---~~------~---~~~~l~~~~~~~~~~ 106 (171)
T 2rli_A 41 ICPDELEKLVQVV--RQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD---FH------P---RLLGLTGSTKQVAQA 106 (171)
T ss_dssp SHHHHHHHHHHHH--HHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHT---TC------T---TCCEEECCHHHHHHH
T ss_pred hhHHHHHHHHHHH--HHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHH---cC------C---CeEEEeCCHHHHHHH
Confidence 4999999999999 58864 68999999987 57888899886 66 7 89999975 3589
Q ss_pred HHHhCCCccC-----CC----CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 70 SKTYGCYLSS-----AG----HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 70 a~~yg~~~~~-----~g----~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
++.||+...- .+ ...|++||||++|+|++.+.+.. +.+++.+.|+++..
T Consensus 107 ~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 107 SHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR----SAEQISDSVRRHMA 164 (171)
T ss_dssp HHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC----CHHHHHHHHHHHHH
T ss_pred HHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC----CHHHHHHHHHHHHH
Confidence 9999987310 00 02359999999999999987653 46778887777654
No 66
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.46 E-value=1.8e-13 Score=98.04 Aligned_cols=98 Identities=17% Similarity=0.276 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|..+++.|.+++ ++|...++.+++|+.|. ..++|.+. ++ + +||+++|.++++++.||+.
T Consensus 56 C~~~~~~l~~~~--~~~~~~~~~~v~v~~d~--~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v~----- 114 (158)
T 3hdc_A 56 CRDEMPSMDRLV--KSFPKGDLVVLAVNVEK--RFPEKYRR---AP------V---SFNFLSDATGQVQQRYGAN----- 114 (158)
T ss_dssp HHHHHHHHHHHH--HHSSTTSEEEEEEECSS--SCCGGGGG---CC------C---SCEEEECTTSHHHHHTTCC-----
T ss_pred HHHHHHHHHHHH--HHcccCCeEEEEEeCCH--HHHHHHHH---cC------C---CceEEECchHHHHHHhCCC-----
Confidence 899999999999 68988899999999987 45556554 65 8 9999999999999999997
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccc
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~ 123 (145)
..|++||||++|+|++.+.|..+ .+..++++.+++.+..
T Consensus 115 -~~P~~~lid~~G~i~~~~~G~~~--~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 115 -RLPDTFIVDRKGIIRQRVTGGIE--WDAPKVVSYLKSLEGH 153 (158)
T ss_dssp -SSSEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTTC--
T ss_pred -CcceEEEEcCCCCEEEEEeCCCc--cchHHHHHHHHhhccc
Confidence 37999999999999999998765 3568899988887754
No 67
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.46 E-value=9.2e-13 Score=93.61 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=70.6
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC---chHHHHHhCCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS---THAISKTYGCY 76 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~---~~~va~~yg~~ 76 (145)
.|..+++.|.+++ ++|...|+++++|+.| +.+..++|.+. ++ + +||+++|. ..++++.||+.
T Consensus 43 ~C~~~~~~l~~l~--~~~~~~~~~vv~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 43 WCRKETPYLLKTY--NAFKDKGFTIYGVSTDRREEDWKKAIEE---DK------S---YWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp THHHHHHHHHHHH--HHHTTTTEEEEEEECCSCHHHHHHHHHH---HT------C---CSEEEEECHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHH--HHhccCCeEEEEEEccCCHHHHHHHHHH---hC------C---CCeEEecccchhHHHHHHhCCC
Confidence 3999999999998 6899889999999998 46666777665 66 8 99999999 79999999987
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
..|++||||++|+|++.+.
T Consensus 109 ------~~P~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 109 ------GFPHIILVDPEGKIVAKEL 127 (152)
T ss_dssp ------SSCEEEEECTTSEEEEECC
T ss_pred ------cCCeEEEECCCCeEEEeeC
Confidence 3799999999999998874
No 68
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.46 E-value=3.6e-13 Score=94.22 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=80.5
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCC-ccEEecCchH--HHHHhCCC
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKI-VPLLSDSTHA--ISKTYGCY 76 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~-fpllsD~~~~--va~~yg~~ 76 (145)
.|..+++.|.+++ ++|...|+.+++|+.| +.+..++|.+. ++ + + ||+++|..+. +++.||+.
T Consensus 45 ~C~~~~~~l~~l~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~~~i~ 110 (148)
T 3hcz_A 45 HCQQETPKLYDWW--LKNRAKGIQVYAANIERKDEEWLKFIRS---KK------I---GGWLNVRDSKNHTDFKITYDIY 110 (148)
T ss_dssp TTCSHHHHHHHHH--HHHGGGTEEEEEEECCSSSHHHHHHHHH---HT------C---TTSEEEECTTCCCCHHHHHCCC
T ss_pred cHHHHHHHHHHHH--HHhccCCEEEEEEEecCCHHHHHHHHHH---cC------C---CCceEEeccccchhHHHhcCcC
Confidence 3899999999998 6899889999999998 56777888776 65 7 6 9999999988 99999987
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 77 LSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 77 ~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
..|++||||++|+|++.+.+. .+.+++++.+.++
T Consensus 111 ------~~P~~~lid~~G~i~~~~~g~----~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 111 ------ATPVLYVLDKNKVIIAKRIGY----ENLDDFLVQYEKS 144 (148)
T ss_dssp ------SSCEEEEECTTCBEEEESCCG----GGHHHHHHHHHHH
T ss_pred ------CCCEEEEECCCCcEEEecCCH----HHHHHHHHHHHHH
Confidence 379999999999999987765 3466777666543
No 69
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.45 E-value=1.8e-12 Score=90.49 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D------~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~ 75 (145)
|..+++.|.+++ ++|... +.+++|+.| +.+..++|.+. ++ + +||++.|.++++++.||+
T Consensus 44 C~~~~~~l~~l~--~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~v 108 (148)
T 2b5x_A 44 CKEAMPQVNEFR--DKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAE---HD------I---TQPIFVDSDHALTDAFEN 108 (148)
T ss_dssp HHHHHHHHHHHH--HHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHH---TT------C---CSCEEECSSCHHHHHTCC
T ss_pred HHHHhHHHHHHH--HHhcCC-cEEEEEEcCCCccccCHHHHHHHHHH---cC------C---CcceEECCchhHHHHhCC
Confidence 899999999998 578766 999999987 57788888876 76 8 999999999999999998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
. ..|++||||++|+|++.+.|.. +.+++.+.|+++-
T Consensus 109 ~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~l 144 (148)
T 2b5x_A 109 E------YVPAYYVFDKTGQLRHFQAGGS----GMKMLEKRVNRVL 144 (148)
T ss_dssp C------CSSEEEEECTTCBEEEEEESCS----TTHHHHHHHHHHH
T ss_pred C------CCCEEEEECCCCcEEEEecCCC----CHHHHHHHHHHHH
Confidence 7 3799999999999999888763 3467777776654
No 70
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.44 E-value=1.8e-12 Score=89.40 Aligned_cols=95 Identities=12% Similarity=0.050 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|. ++.+++|+.|+ .+..++|.+. ++ + +||++.|.+.++++.||+.
T Consensus 39 C~~~~~~l~~~~--~~~~--~~~~~~v~~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~i~---- 98 (136)
T 1lu4_A 39 CNAEAPSLSQVA--AANP--AVTFVGIATRADVGAMQSFVSK---YN------L---NFTNLNDADGVIWARYNVP---- 98 (136)
T ss_dssp HHHHHHHHHHHH--HHCT--TSEEEEEECSSCHHHHHHHHHH---HT------C---CSEEEECTTSHHHHHTTCC----
T ss_pred HHHHHHHHHHHH--HHCC--CcEEEEEEcCCCHHHHHHHHHH---cC------C---CceEEECCchhHHHhcCCC----
Confidence 899999999998 5776 89999999875 8888888886 76 8 9999999999999999987
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
..|++||||++|+|+ .+.+. ....+.+++.+.|+++
T Consensus 99 --~~P~~~lid~~G~i~-~~~~~-~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 99 --WQPAFVFYRADGTST-FVNNP-TAAMSQDELSGRVAAL 134 (136)
T ss_dssp --SSSEEEEECTTSCEE-EECCS-SSCCCHHHHHHHHHHC
T ss_pred --CCCEEEEECCCCcEE-EEEcC-CCccCHHHHHHHHHHH
Confidence 379999999999999 66611 1123578888888775
No 71
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.43 E-value=1.2e-12 Score=93.61 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHH-HHHHHHHHhhcCCCCCCCCCCCCccEEecCchH---HHHHhCCCc
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLA-HLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHA---ISKTYGCYL 77 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~---va~~yg~~~ 77 (145)
|..+++.|.+++ ++|+++|++|++||.|+... .++|.. + + +||+++|.++. +++.||+.
T Consensus 50 C~~~~~~l~~l~--~~~~~~~~~vv~i~~d~~~~~~~~~~~-----~------~---~~~~~~d~~~~~~~~~~~~~v~- 112 (152)
T 2lrt_A 50 SAAHNLALRELY--NKYASQGFEIYQISLDGDEHFWKTSAD-----N------L---PWVCVRDANGAYSSYISLYNVT- 112 (152)
T ss_dssp HHHHHHHHHHHH--HHHGGGTEEEEEEECSCCHHHHHHHHT-----T------C---SSEEEECSSGGGCHHHHHHTCC-
T ss_pred hHHHHHHHHHHH--HHhccCCeEEEEEEccCCHHHHHHHHh-----C------C---CceEEECCCCcchHHHHHcCcc-
Confidence 899999999999 68998899999999986543 233322 2 7 89999999987 99999987
Q ss_pred cCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 78 SSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 78 ~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
..|++||||++|+|++.+.|. .+.++.+..+..
T Consensus 113 -----~~P~~~lid~~G~i~~~~~g~----~~~e~~~~~~~~ 145 (152)
T 2lrt_A 113 -----NLPSVFLVNRNNELSARGENI----KDLDEAIKKLLE 145 (152)
T ss_dssp -----SCSEEEEEETTTEEEEETTTC----SCHHHHHHHHHG
T ss_pred -----cCceEEEECCCCeEEEecCCH----HHHHHHHHHHHh
Confidence 379999999999999987765 345565554443
No 72
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.42 E-value=1e-12 Score=96.39 Aligned_cols=80 Identities=20% Similarity=0.317 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC-CCHHHHHHHHHHHhhcCCCCCCCCCCCCcc-EEecCchHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV-DSHLAHLAWTKTLTATSSNRSAIDPSKIVP-LLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~fp-llsD~~~~va~~yg~~~~~ 79 (145)
|..+++.|+++++ + |+.|++||. |+.+..++|.+. ++ + +|+ +++|.++.+++.||+.
T Consensus 73 C~~~~~~l~~l~~--~----~v~vv~vs~~d~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~v~--- 131 (176)
T 3kh7_A 73 CRVEHPELTRLAE--Q----GVVIYGINYKDDNAAAIKWLNE---LH------N---PYLLSISDADGTLGLDLGVY--- 131 (176)
T ss_dssp HHHHHHHHHHHHH--T----TCEEEEEEESCCHHHHHHHHHH---TT------C---CCSEEEEETTCHHHHHHTCC---
T ss_pred HHHHHHHHHHHHH--C----CCEEEEEeCCCCHHHHHHHHHH---cC------C---CCceEEECCcchHHHHcCCC---
Confidence 8999999999883 3 899999994 778888899886 76 7 888 5899999999999997
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCC
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQ 105 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~ 105 (145)
..|++||||++|+|++.+.+..+
T Consensus 132 ---~~P~~~lid~~G~i~~~~~g~~~ 154 (176)
T 3kh7_A 132 ---GAPETYLIDKQGIIRHKIVGVVD 154 (176)
T ss_dssp ---SSCEEEEECTTCBEEEEEESCCC
T ss_pred ---CCCeEEEECCCCeEEEEEcCCCC
Confidence 37999999999999999988753
No 73
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.42 E-value=2.1e-12 Score=92.20 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC------CHHHHHHHHHHHhhcCCCCCCCCCCCC-ccEEecCchHHHHHhC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD------SHLAHLAWTKTLTATSSNRSAIDPSKI-VPLLSDSTHAISKTYG 74 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D------~~~~~~~~~~~~~~~~~~~~~~~~~~~-fpllsD~~~~va~~yg 74 (145)
|..+++.|.+++ ++|+..|++||+||.| +.+..++|.+. ++ + + ||++.|.++++++.||
T Consensus 53 C~~~~~~l~~l~--~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~ 118 (164)
T 2h30_A 53 CLSELGQAEKWA--QDAKFSSANLITVASPGFLHEKKDGEFQKWYAG---LN------Y---PKLPVVTDNGGTIAQNLN 118 (164)
T ss_dssp HHHHHHHHHHHH--TCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTT---SC------C---TTSCEEECTTCHHHHHTT
T ss_pred HHHHHHHHHHHH--HHcccCCcEEEEEEcCCCccccCHHHHHHHHHh---CC------C---CcceEEEcCchHHHHHcC
Confidence 899999999999 6898899999999974 34455565543 44 6 5 9999999999999999
Q ss_pred CCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 75 CYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 75 ~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
+. ..|++||||++|+|++.+.|.. +.+++.+.|+++..
T Consensus 119 v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 119 IS------VYPSWALIGKDGDVQRIVKGSI----NEAQALALIRNPNA 156 (164)
T ss_dssp CC------SSSEEEEECTTSCEEEEEESCC----CHHHHHHHHHCTTC
T ss_pred CC------ccceEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHHH
Confidence 87 3799999999999999888753 46788888877653
No 74
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.42 E-value=1.3e-12 Score=91.92 Aligned_cols=90 Identities=8% Similarity=0.085 Sum_probs=72.5
Q ss_pred hhHHHHHHHH---HhhhhhhhcCCcEEEEEeCCCH-HHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchH--HHHHhCC
Q psy17183 2 DTKIACDVLK---LVRKEILIVSPFQIIAVSVDSH-LAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHA--ISKTYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~---~~~~~~f~~~gv~vi~VS~D~~-~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~--va~~yg~ 75 (145)
|..++|.|.+ ++ ++|+..+++||+||.|.. +..++|.+ +++ + +||.+.|.++. +++.|++
T Consensus 46 C~~~~~~l~~~~~l~--~~~~~~~~~vi~i~~d~~~~~~~~~~~---~~~------~---~~~~~~d~~~~~~~~~~~~v 111 (142)
T 3eur_A 46 CAEMIEGLKASPVIN--GFTAAKKLKVLSIYPDEELDEWKKHRN---DFA------K---EWTNGYDKELVIKNKNLYDL 111 (142)
T ss_dssp HHHHHHHHHHCHHHH--HHHHTTSEEEEEEECSSCHHHHHHHGG---GSC------T---TSEEEECTTCHHHHTTCSCC
T ss_pred HHHHHHHHhhhHHHH--HHhccCCeEEEEEEcCCCHHHHHHHHH---hcc------c---ccccccCccchhhhhhhcCC
Confidence 9999999999 88 689889999999999864 44444444 466 7 89999999876 7888988
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHH
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVE 118 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~ 118 (145)
. ..|++||||++|+|++...+ .+++.+.|+
T Consensus 112 ~------~~P~~~lid~~G~i~~~~~~-------~~~l~~~l~ 141 (142)
T 3eur_A 112 R------AIPTLYLLDKNKTVLLKDAT-------LQKVEQYLA 141 (142)
T ss_dssp T------TCSEEEEECTTCBEEEEEEC-------HHHHHHHHH
T ss_pred C------cCCeEEEECCCCcEEecCCC-------HHHHHHHHh
Confidence 7 37999999999999998764 356666554
No 75
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.42 E-value=1e-12 Score=93.11 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=82.7
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC---CCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec---CchHHHHHhCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV---DSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD---STHAISKTYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~---D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD---~~~~va~~yg~ 75 (145)
|..+++.|.+++ ++| ++++++|+. |+.+..++|.+. ++ + +||+++| ....+++.||+
T Consensus 45 C~~~~~~l~~l~--~~~---~v~~v~v~~d~~~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~~v 107 (154)
T 3ia1_A 45 CKAEFPGLHRVA--EET---GVPFYVISREPRDTREVVLEYMKT---YP------R---FIPLLASDRDRPHEVAARFKV 107 (154)
T ss_dssp HHHHHHHHHHHH--HHH---CCCEEEEECCTTCCHHHHHHHHTT---CT------T---EEECBCCSSCCHHHHHTTSSB
T ss_pred HHHHHHHHHHHH--HHc---CCeEEEEeCCCcccHHHHHHHHHH---cC------C---CcccccccccchHHHHHHhCC
Confidence 899999999999 577 899999999 778888888775 66 8 9999999 88999999998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
. ..|++||||++|+|++.+.|.. +.+++.+.|+++....
T Consensus 108 ~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 108 L------GQPWTFVVDREGKVVALFAGRA----GREALLDALLLAGADL 146 (154)
T ss_dssp C------SSCEEEEECTTSEEEEEEESBC----CHHHHHHHHHHTTCCC
T ss_pred C------cccEEEEECCCCCEEEEEcCCC----CHHHHHHHHHhccCcc
Confidence 7 4799999999999999988763 4788999998887543
No 76
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.42 E-value=2.2e-12 Score=105.71 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D------~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~ 75 (145)
|..+++.|.+++ ++|+..++.||+||.| +++..++|+++ ++ + +||++.|.+.++++.|++
T Consensus 97 C~~~~p~L~~l~--~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~---~~------l---~fpv~~D~~~~l~~~ygV 162 (352)
T 2hyx_A 97 CQRAIPHVVGWY--QAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAAN---LG------I---SYPIALDNNYATWTNYRN 162 (352)
T ss_dssp HHHHHHHHHHHH--HHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHH---HT------C---CSCEEECTTSHHHHHTTC
T ss_pred HHHHHHHHHHHH--HHhhcCCeEEEEEECCcccccCCHHHHHHHHHH---cC------C---CccEEeCCcHHHHHHcCC
Confidence 999999999999 6899889999999974 57788888876 76 8 999999999999999998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCC
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVN 133 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~ 133 (145)
. ..|++||||++|+|++.+.|.. +.+++.+.|+++......+...|..
T Consensus 163 ~------~~Pt~~lID~~G~Iv~~~~G~~----~~~~l~~~I~~lL~e~~~~~~lpap 210 (352)
T 2hyx_A 163 R------YWPAEYLIDATGTVRHIKFGEG----DYNVTETLVRQLLNDAKPGVKLPQP 210 (352)
T ss_dssp C------EESEEEEECTTSBEEEEEESBC----CHHHHHHHHHHHHHHHSTTCCCCSC
T ss_pred C------ccCEEEEEeCCCeEEEEEcCCC----CHHHHHHHHHHHHhhccCCCCCCCC
Confidence 7 4799999999999999988764 3677777777765443333444444
No 77
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.41 E-value=4.4e-13 Score=96.47 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHhhhhhhhcC---CcEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCc---hHHHH
Q psy17183 2 DTKIACDVLKLVRKEILIVS---PFQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDST---HAISK 71 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~---gv~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~---~~va~ 71 (145)
|..+++.|++++ ++|..+ +++||+||.| +++..++|+++ ++ + +||+++|.. +++++
T Consensus 51 C~~~~~~l~~~~--~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~---~~------~---~~~~l~d~~~~~~~~~~ 116 (172)
T 2k6v_A 51 CPTTLLALKRAY--EKLPPKAQERVQVIFVSVDPERDPPEVADRYAKA---FH------P---SFLGLSGSPEAVREAAQ 116 (172)
T ss_dssp HHHHHHHHHHHH--TTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHH---HC------T---TEEEECCCHHHHHHHHH
T ss_pred hHHHHHHHHHHH--HHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHH---hC------C---CcEEEeCCHHHHHHHHH
Confidence 999999999999 688775 7999999975 57888999886 76 7 999999998 79999
Q ss_pred HhCCCccCC--------C-CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 72 TYGCYLSSA--------G-HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 72 ~yg~~~~~~--------g-~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.||+..... + ...|++|||| +|+|++.+.+.. ..+.+++++.|+++
T Consensus 117 ~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 117 TFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDK--AEATDRVVADLQAL 171 (172)
T ss_dssp HHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHH--HTCHHHHHHHHHHC
T ss_pred hcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCC--CCCHHHHHHHHHHh
Confidence 999853210 0 1469999999 999999988764 22578898888775
No 78
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.41 E-value=2.9e-12 Score=89.53 Aligned_cols=94 Identities=12% Similarity=0.166 Sum_probs=78.2
Q ss_pred ChhHHHHHHHHHhhhhhh-hcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC---chHHHHHhCC
Q psy17183 1 MDTKIACDVLKLVRKEIL-IVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS---THAISKTYGC 75 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f-~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~---~~~va~~yg~ 75 (145)
.|..+++.|.+++ ++| ...|+.+++|+.|. .+..++|.+. ++ + +||++.|. ...+++.||+
T Consensus 47 ~C~~~~~~l~~l~--~~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 47 PQPEANAELKRLN--KEYKKNKNFAMLGISLDIDREAWETAIKK---DT------L---SWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp CCHHHHHHHHHHH--HHTTTCTTEEEEEEECCSCHHHHHHHHHH---TT------C---CSEEECCSCGGGCHHHHHTTC
T ss_pred HHHHHhHHHHHHH--HHhcCCCCeEEEEEECCCCHHHHHHHHHH---cC------C---CceEEEccCCcchHHHHhcCC
Confidence 3999999999999 689 88899999999984 5566777765 76 8 99999999 7899999998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
. ..|++||||++|+|++.+. +.+++.+.|+++-
T Consensus 113 ~------~~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~ll 145 (148)
T 3fkf_A 113 L------TLPTNILLSPTGKILARDI-------QGEALTGKLKELL 145 (148)
T ss_dssp C------SSSEEEEECTTSBEEEESC-------CHHHHHHHHHHHC
T ss_pred C------CcCEEEEECCCCeEEEecC-------CHHHHHHHHHHHH
Confidence 8 3799999999999998765 3567777776653
No 79
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.41 E-value=4.2e-12 Score=90.57 Aligned_cols=101 Identities=14% Similarity=0.232 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|...|+.+++|+.|+ .+..++|.+. ++ + +||++.|.. ++++.|+......
T Consensus 49 C~~~~~~l~~l~--~~~~~~~v~~v~v~~d~~~~~~~~~~~~---~~------~---~~~~~~~~~-~~~~~~~~~~~~~ 113 (165)
T 3or5_A 49 CRSEIPDMVQVQ--KTWASRGFTFVGIAVNEQLPNVKNYMKT---QG------I---IYPVMMATP-ELIRAFNGYIDGG 113 (165)
T ss_dssp HHHHHHHHHHHH--HHHTTTTEEEEEEECSCCHHHHHHHHHH---HT------C---CSCEEECCH-HHHHHHHTTSTTC
T ss_pred HHHHHHHHHHHH--HHhccCCeEEEEEECCCCHHHHHHHHHH---cC------C---CCceEecCH-HHHHHHhhhhccC
Confidence 899999999999 68998999999999875 7778888876 76 8 999999976 8999996443211
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
-...|++||||++|+|++.+.|.. +.+++.+.|+++-
T Consensus 114 i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~l 150 (165)
T 3or5_A 114 ITGIPTSFVIDASGNVSGVIVGPR----SKADFDRIVKMAL 150 (165)
T ss_dssp SCSSSEEEEECTTSBEEEEECSCC----CHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHH
Confidence 124799999999999999887764 3677777776664
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.40 E-value=9.4e-13 Score=97.62 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=76.5
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHH-HHHhhcCCCCCCCCCCCCccEEe--cCchHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWT-KTLTATSSNRSAIDPSKIVPLLS--DSTHAI 69 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~fplls--D~~~~v 69 (145)
.|..|++.|++++ ++|..+|++||+||.| +++..++|+ ++ ++ + +||+++ |.++.+
T Consensus 62 ~C~~~~~~l~~l~--~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~---~~------~---~~p~l~~~D~~~~~ 127 (190)
T 2vup_A 62 YTKGGYETATTLY--NKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTK---FK------A---EFPIMAKINVNGEN 127 (190)
T ss_dssp THHHHHHHHHHHH--HHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHH---HC------C---CSCBBCCCBSSSTT
T ss_pred ccHHHHHHHHHHH--HHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHh---cC------C---CeEEEeecccCccc
Confidence 4999999999999 6899899999999987 688889998 65 66 8 999997 677665
Q ss_pred HH-H--------hCCCccCCCCcce------EEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 70 SK-T--------YGCYLSSAGHSLR------AYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 70 a~-~--------yg~~~~~~g~~~p------~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
++ . ||+. ..| ++||||++|+|++.+.+.. +.+++.+.|+++-
T Consensus 128 ~~~~~~~l~~~~~~v~------~~P~i~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ll 184 (190)
T 2vup_A 128 AHPLYEYMKKTKPGIL------KTKAIKWNFTSFLIDRDGVPVERFSPGA----SVKDIEKKLIPLL 184 (190)
T ss_dssp BCHHHHHHHHHSCCGG------GCCSCCSTTCEEEECTTSCEEEEECTTC----CHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhcCCcC------CCccccccceEEEECCCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 43 2 3543 245 9999999999999987753 3567777776654
No 81
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.39 E-value=2.2e-12 Score=98.20 Aligned_cols=93 Identities=22% Similarity=0.252 Sum_probs=74.6
Q ss_pred hhH-HHHHHHHHhhhhhh-hcCCc-EEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 2 DTK-IACDVLKLVRKEIL-IVSPF-QIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~-e~~~~~~~~~~~~f-~~~gv-~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
|+. ++|.|.+.+ ++| +.+|+ +|++||+|+++++++|.+. .+.. ... .+++|+|.+++++++||+...
T Consensus 85 CS~~hlPgf~~~~--d~~~k~kGvd~I~ciSVND~FVm~AW~k~---~~~~--~~~---~i~~laD~~~eftkalGl~~~ 154 (199)
T 4h86_A 85 CTVSHIPGYINYL--DELVKEKEVDQVIVVTVDNPFANQAWAKS---LGVK--DTT---HIKFASDPGCAFTKSIGFELA 154 (199)
T ss_dssp HHHTTHHHHHHHH--HHHHHHSCCCEEEEEESSCHHHHHHHHHH---TTCC--CCS---SEEEEECGGGHHHHHTTCEEE
T ss_pred CChhhChHHHHHH--HHHHHhcCCcEEEEEEcCCHHHHHHHHHH---hccc--ccc---cccccCCcchHHHHhcCceee
Confidence 877 589999999 554 78898 6999999999999999987 3200 014 699999999999999998654
Q ss_pred CCC---CcceEEEEECCCCcEEEEEeecCC
Q psy17183 79 SAG---HSLRAYYIIDKRGYLRSMNVSDIQ 105 (145)
Q Consensus 79 ~~g---~~~p~tfIID~dG~I~~~~~~~~~ 105 (145)
..+ .+.|.++||| ||+|.+.++.+.+
T Consensus 155 ~~~gg~RS~Rya~IVd-DGvV~~~~vE~~p 183 (199)
T 4h86_A 155 VGDGVYWSGRWAMVVE-NGIVTYAAKETNP 183 (199)
T ss_dssp EETTEEEECSEEEEEE-TTEEEEEEECSST
T ss_pred cCCCcceeeEEEEEEE-CCEEEEEEEeCCC
Confidence 322 2678999998 9999999997643
No 82
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=96.27 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=76.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe--cCchHHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS--DSTHAIS 70 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls--D~~~~va 70 (145)
.|..+++.|++++ ++|..+|++||+||.| +++..++|++. ++ + +||+++ |.++..+
T Consensus 61 ~C~~~~~~l~~l~--~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~---~~------~---~~p~~~~~d~~~~~~ 126 (183)
T 2obi_A 61 KTEVNYTQLVDLH--ARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG---YN------V---KFDMFSKICVNGDDA 126 (183)
T ss_dssp THHHHHHHHHHHH--HHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHT---TT------C---CSEEBCCCCCSSTTS
T ss_pred CcHHHHHHHHHHH--HHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHH---cC------C---CceEEeeeccCCcch
Confidence 4999999999999 6899899999999975 67888888875 76 8 999997 7777654
Q ss_pred H-Hh----------CCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 71 K-TY----------GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 71 ~-~y----------g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
. .| |+... .-...|++||||++|+|++.+.+.. +.+++.+.|+++
T Consensus 127 ~~~~~~l~~~~~~~g~~~~-~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 182 (183)
T 2obi_A 127 HPLWKWMKIQPKGKGILGN-AIKWNFTKFLIDKNGCVVKRYGPME----EPLVIEKDLPHY 182 (183)
T ss_dssp CHHHHHHHTSTTTCCSSSS-SCCSTTCEEEECTTSCEEEEECTTS----CTHHHHTTSGGG
T ss_pred hHHHHHhhccCCCCCcccc-cccccceEEEECCCCCEEEEeCCCC----CHHHHHHHHHHh
Confidence 3 34 32210 0012589999999999999987753 346777766654
No 83
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.38 E-value=8.3e-13 Score=97.53 Aligned_cols=100 Identities=12% Similarity=0.024 Sum_probs=73.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe--cCchHHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS--DSTHAIS 70 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls--D~~~~va 70 (145)
.|..|++.|++++ ++|+++|++||+||.| +++..++|+++ ++ + +||+++ |.++..+
T Consensus 63 ~C~~~~~~l~~l~--~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~---~~------~---~~p~~~~~d~~~~~~ 128 (185)
T 2gs3_A 63 KTEVNYTQLVDLH--ARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG---YN------V---KFDMFSKICVNGDDA 128 (185)
T ss_dssp THHHHHHHHHHHH--HHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHH---TT------C---CSEEBCCCBSSSTTB
T ss_pred chHHHHHHHHHHH--HHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHH---cC------C---CCeeeeeeccCChhh
Confidence 4999999999999 6899999999999975 46778888875 76 8 899997 6666654
Q ss_pred H-Hh----------CCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 71 K-TY----------GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 71 ~-~y----------g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
. .| |+... .-...|++||||++|+|++.+.+..+ .+++.+.|++
T Consensus 129 ~~~~~~l~~~~~~~g~~~~-~i~~~P~~~lid~~G~i~~~~~g~~~----~~~l~~~i~~ 183 (185)
T 2gs3_A 129 HPLWKWMKIQPKGKGILGN-AIKWNFTKFLIDKNGCVVKRYGPMEE----PLVIEKDLPH 183 (185)
T ss_dssp CHHHHHHTTSGGGCCSSSS-SCCSSCCEEEECTTSCEEEEECTTSC----GGGGGGGHHH
T ss_pred hHHHHHHHhhcccccccCC-cccccceEEEECCCCCEEEeeCCCCC----HHHHHHHHHH
Confidence 3 34 32200 00025899999999999999877532 3455555544
No 84
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.36 E-value=1.5e-11 Score=84.03 Aligned_cols=95 Identities=20% Similarity=0.254 Sum_probs=77.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEE------eCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAV------SVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGC 75 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~V------S~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~ 75 (145)
|..+++.|.+++ ++ ...++.+++| +.++.+..++|.+. ++ +. +||+++|.++++++.||+
T Consensus 37 C~~~~~~l~~~~--~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~---~~------~~--~~~~~~d~~~~~~~~~~v 102 (138)
T 4evm_A 37 CLASLPDTDEIA--KE-AGDDYVVLTVVSPGHKGEQSEADFKNWYKG---LD------YK--NLPVLVDPSGKLLETYGV 102 (138)
T ss_dssp HHHHHHHHHHHH--HT-CTTTEEEEEEECTTSTTCCCHHHHHHHHTT---CC------CT--TCCEEECTTCHHHHHTTC
T ss_pred HHHHHHHHHHHH--HH-hCCCcEEEEEEcCCCCchhhHHHHHHHHhh---cC------CC--CeeEEECcchHHHHHcCc
Confidence 899999999998 35 4568999999 34567777777764 54 21 799999999999999998
Q ss_pred CccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 76 YLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 76 ~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
. ..|++||||++|+|++.+.|.. +.+++.+.|+++
T Consensus 103 ~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~l 137 (138)
T 4evm_A 103 R------SYPTQAFIDKEGKLVKTHPGFM----EKDAILQTLKEL 137 (138)
T ss_dssp C------SSSEEEEECTTCCEEEEEESCC----CHHHHHHHHHHC
T ss_pred c------cCCeEEEECCCCcEEEeecCCC----cHHHHHHHHHhh
Confidence 7 3799999999999999988763 468888888776
No 85
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.36 E-value=2.2e-12 Score=92.63 Aligned_cols=100 Identities=14% Similarity=0.236 Sum_probs=75.3
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEE--ecCchHHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLL--SDSTHAIS 70 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fpll--sD~~~~va 70 (145)
-|..+++.|++++ ++|+.+|++||+||.| +.+..++|++. +++ + +||++ .|.++.++
T Consensus 46 ~C~~~~~~l~~l~--~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~--~~~------~---~~~~~~~~d~~~~~~ 112 (170)
T 2p5q_A 46 MTNSNYAEMNQLY--EKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCT--RFK------S---EFPIFDKIDVNGENA 112 (170)
T ss_dssp THHHHHHHHHHHH--HHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHH--HTC------C---CSCBBCCCBSSSTTB
T ss_pred ccHHHHHHHHHHH--HHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHH--hcC------C---CceeEeeeccCCCch
Confidence 3999999999999 6899889999999985 67788888872 266 8 89999 68877664
Q ss_pred H-H--------hCCCccCCCCcce---EEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 71 K-T--------YGCYLSSAGHSLR---AYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 71 ~-~--------yg~~~~~~g~~~p---~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
. . ||+. +...| ++||||++|+|++.+.+..+ .+++.+.|+++.
T Consensus 113 ~~~~~~l~~~~~~~~----~~~~p~~~~~~lid~~G~i~~~~~g~~~----~~~l~~~i~~ll 167 (170)
T 2p5q_A 113 SPLYRFLKLGKWGIF----GDDIQWNFAKFLVNKDGQVVDRYYPTTS----PLSLERDIKQLL 167 (170)
T ss_dssp CHHHHHHHTHHHHTT----CSCCCSTTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHHT
T ss_pred HHHHHHHHhcCCCcc----CCcccccccEEEECCCCCEEEeeCCCCC----HHHHHHHHHHHh
Confidence 2 2 3552 11356 99999999999999887543 345666665543
No 86
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.35 E-value=9.2e-12 Score=91.05 Aligned_cols=106 Identities=9% Similarity=0.017 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHhhhhhhhc--CCcEEEEEeCC---CHHHHHHHHHHHhhcCCCCCCCCCCCCcc---EE--ec--CchHH
Q psy17183 2 DTKIACDVLKLVRKEILIV--SPFQIIAVSVD---SHLAHLAWTKTLTATSSNRSAIDPSKIVP---LL--SD--STHAI 69 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~--~gv~vi~VS~D---~~~~~~~~~~~~~~~~~~~~~~~~~~~fp---ll--sD--~~~~v 69 (145)
|+.|++.|++++ ++|.+ .+++||+||.| +++.+++|+++ ++ + +|| ++ .| ...++
T Consensus 44 C~~~~~~l~~~~--~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~---~~------~---~~~~w~~l~~~~~~~~~~~ 109 (170)
T 3me7_A 44 CPLITKSLLKVI--PKLGTPGKDFWVITFTFDPKDTLEDIKRFQKE---YG------I---DGKGWKVVKAKTSEDLFKL 109 (170)
T ss_dssp HHHHHHHHHTTH--HHHCCBTTTBEEEEEECCTTCCHHHHHHHHHH---TT------C---CSSSEEEEEESSHHHHHHH
T ss_pred hHHHHHHHHHHH--HHhhhcCCceEEEEEECCCCCCHHHHHHHHHH---cC------C---CCCCeEEEeCCCHHHHHHH
Confidence 899999999999 58865 56999999986 68888999886 65 4 444 43 23 46789
Q ss_pred HHHhCCCccC--CC-CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 70 SKTYGCYLSS--AG-HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 70 a~~yg~~~~~--~g-~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
+++||+.... .+ ...|++||||++|+|++.+.+.. .+.++++++|+++....
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~---~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 110 LDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVN---YNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSS---CCHHHHHHHHHHHTTCS
T ss_pred HHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCC---CCHHHHHHHHHHhhccc
Confidence 9998875321 11 23689999999999999987653 45899999998887543
No 87
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.35 E-value=1.4e-11 Score=88.35 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=78.2
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-------------------CHHHHHHHHHHHhhcCCCCCCCCCCCCccE
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD-------------------SHLAHLAWTKTLTATSSNRSAIDPSKIVPL 61 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~fpl 61 (145)
.|..+++.|.+++ ++|. ++.|++|+.| +.+..++|.+. ++ ++ +||+
T Consensus 51 ~C~~~~~~l~~l~--~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~--~~~~ 115 (165)
T 3ha9_A 51 SCVYMADLLDRLT--EKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIAN---YG------DP--SWIM 115 (165)
T ss_dssp THHHHHHHHHHHH--HHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHH---HS------CT--TSEE
T ss_pred chhhhHHHHHHHH--HHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHH---cC------CC--CeeE
Confidence 4999999999998 5787 9999999987 77788888876 54 43 7999
Q ss_pred EecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 62 LSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 62 lsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.| ++++++.|++. ..|++||||++|+|++ .+..+ +.+++.+.|+++.
T Consensus 116 ~~d-~~~~~~~~~v~------~~P~~~lid~~G~i~~--~g~~~---~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 116 VMD-DGSLVEKFNVR------SIDYIVIMDKSSNVLY--AGTTP---SLGELESVIKSVQ 163 (165)
T ss_dssp EEC-CSHHHHHTTCC------SSSEEEEEETTCCEEE--EEESC---CHHHHHHHHHHC-
T ss_pred EeC-hHHHHHHhCCC------CceEEEEEcCCCcEEE--eCCCC---CHHHHHHHHHHHh
Confidence 999 99999999987 3799999999999998 55531 4678888888764
No 88
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.34 E-value=4.7e-12 Score=90.79 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=74.1
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHH-HHHHhhcCCCCCCCCCCCCccEEe--cCchHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAW-TKTLTATSSNRSAIDPSKIVPLLS--DSTHAI 69 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~fplls--D~~~~v 69 (145)
.|..+++.|++++ ++|.++|++||+||.| +.+..++| .+. ++ + +||+++ |.++.+
T Consensus 45 ~C~~~~~~l~~l~--~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~---~~------~---~~~~~~~~d~~~~~ 110 (169)
T 2v1m_A 45 ATDKNYRQLQEMH--TRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEK---YG------V---QFDMFSKIKVNGSD 110 (169)
T ss_dssp THHHHHHHHHHHH--HHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHH---HC------C---CSEEBCCCCCSSTT
T ss_pred chHHHHHHHHHHH--HHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHh---cC------C---CCceEEEEeecCcc
Confidence 3999999999999 6899899999999985 46788888 465 66 8 999996 777776
Q ss_pred HH-Hh--------CCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 70 SK-TY--------GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 70 a~-~y--------g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+. .| |+.... -...|++||||++|+|++.+.+..+ .+++.+.|+++
T Consensus 111 ~~~~~~~l~~~~~~~~~~~-i~~~P~~~lid~~G~i~~~~~g~~~----~~~l~~~i~~l 165 (169)
T 2v1m_A 111 ADDLYKFLKSRQHGTLTNN-IKWNFSKFLVDRQGQPVKRYSPTTA----PYDIEGDIMEL 165 (169)
T ss_dssp SCHHHHHHHHHSCCSSSCS-CCSTTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred ccHHHHHHHhhcCCccCCc-ccccceEEEECCCCCEEEEcCCCCC----HHHHHHHHHHH
Confidence 53 34 433100 0125899999999999999887643 34455555544
No 89
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.3e-11 Score=94.54 Aligned_cols=104 Identities=10% Similarity=0.040 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHh---hcCCCCCCCCCCCCccEEecC--chH
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLT---ATSSNRSAIDPSKIVPLLSDS--THA 68 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~fpllsD~--~~~ 68 (145)
|. |+|.|++++ ++|+.+|++|||||.| +.+.+++|++.++ +++ + +||+++|. ++.
T Consensus 71 c~-e~p~L~~l~--~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~------~---~fpll~d~d~~g~ 138 (215)
T 2i3y_A 71 TA-QYPELNALQ--EELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFV------P---SFQLFEKGDVNGE 138 (215)
T ss_dssp GG-GHHHHHHHH--HHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCC------C---SSEEBCCCCSSST
T ss_pred hH-hHHHHHHHH--HHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccC------c---cceeEeeeccCCc
Confidence 66 999999999 6999999999999954 5678889987110 265 8 99999864 344
Q ss_pred HH-HHhCCCc---c----CCC--------------C-cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 69 IS-KTYGCYL---S----SAG--------------H-SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 69 va-~~yg~~~---~----~~g--------------~-~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.+ ..|+... . ..| + -.|++||||++|+|++.+.+.. +.+++.+.|++|.
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~----~~~~l~~~I~~ll 210 (215)
T 2i3y_A 139 KEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRA----TVSSVKTDILAYL 210 (215)
T ss_dssp TCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTS----CHHHHHHHHHHHG
T ss_pred ccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCC----CHHHHHHHHHHHH
Confidence 31 1222100 0 001 0 1379999999999999987653 3567777777765
No 90
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=94.30 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=74.7
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe--cCchHHH
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS--DSTHAIS 70 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls--D~~~~va 70 (145)
.|..|++.|++++ ++|+.+|++||+||.| +.+..++|+++ .++ + +||+++ |.++..+
T Consensus 63 ~C~~~~p~l~~l~--~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~--~~~------~---~~p~~~~~d~~g~~~ 129 (181)
T 2p31_A 63 FTDQHYRALQQLQ--RDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARR--TYS------V---SFPMFSKIAVTGTGA 129 (181)
T ss_dssp THHHHHHHHHHHH--HHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHH--HHC------C---CSCBBCCCCCSSTTS
T ss_pred CcHHHHHHHHHHH--HHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHh--hcC------C---CceeEeecccCCccc
Confidence 4999999999999 6899999999999986 57778888763 145 8 899996 5555543
Q ss_pred H---HhCCCccCCCCcce-------EEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 71 K---TYGCYLSSAGHSLR-------AYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 71 ~---~yg~~~~~~g~~~p-------~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
. .|++. ..| ++||||++|+|++.+.+.. +.+++.+.|+++
T Consensus 130 ~~~~~~~~~------~~P~~~~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 179 (181)
T 2p31_A 130 HPAFKYLAQ------TSGKEPTWNFWKYLVAPDGKVVGAWDPTV----SVEEVRPQITAL 179 (181)
T ss_dssp CHHHHHHHH------HHSCCCCSTTCEEEECTTSCEEEEECTTS----CHHHHHHHHHTT
T ss_pred hhhhhhhhh------cCCCccccceeEEEEcCCCCEEEEeCCCC----CHHHHHHHHHHH
Confidence 3 33333 246 9999999999999987653 467888888776
No 91
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.32 E-value=4.5e-11 Score=81.92 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=77.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|. ++.+++|+.|+ .+..++|.+. ++ ++ +||++.|.+.++++.||+.
T Consensus 40 C~~~~~~l~~~~--~~~~--~~~~~~v~~~~~~~~~~~~~~~---~~------~~--~~~~~~d~~~~~~~~~~i~---- 100 (136)
T 1zzo_A 40 CQGEAPVVGQVA--ASHP--EVTFVGVAGLDQVPAMQEFVNK---YP------VK--TFTQLADTDGSVWANFGVT---- 100 (136)
T ss_dssp HHHHHHHHHHHH--HHCT--TSEEEEEECSSCHHHHHHHHHH---TT------CT--TSEEEECTTCHHHHHTTCC----
T ss_pred HHHHHHHHHHHH--HHcC--CeEEEEEeCCCCHHHHHHHHHH---cC------CC--ceEEEEcCCcHHHHHcCCC----
Confidence 899999999998 5776 89999999864 7778888775 54 32 7999999999999999987
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
..|++||||++|+|+ .+.|.. +.+++.+.|+++-
T Consensus 101 --~~P~~~~id~~g~i~-~~~g~~----~~~~l~~~l~~~l 134 (136)
T 1zzo_A 101 --QQPAYAFVDPHGNVD-VVRGRM----SQDELTRRVTALT 134 (136)
T ss_dssp --SSSEEEEECTTCCEE-EEESCC----CHHHHHHHHHHHC
T ss_pred --CCceEEEECCCCCEE-EEecCC----CHHHHHHHHHHHh
Confidence 379999999999999 777653 3678888777653
No 92
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=92.89 Aligned_cols=104 Identities=11% Similarity=0.031 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHh---hcCCCCCCCCCCCCccEEecC--chH
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLT---ATSSNRSAIDPSKIVPLLSDS--THA 68 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~fpllsD~--~~~ 68 (145)
| .|+|.|++++ ++|+.+|++|||||.| +.+.+++|++.++ +++ + +||+++|. ++.
T Consensus 53 c-~e~p~L~~l~--~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~------~---~fp~l~d~d~~g~ 120 (207)
T 2r37_A 53 T-GQYIELNALQ--EELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFV------P---NFQLFEKGDVNGE 120 (207)
T ss_dssp T-THHHHHHHHH--HHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCC------C---SSEEBCCCCSSST
T ss_pred h-HHHHHHHHHH--HHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccC------c---cceeeeEeccCCc
Confidence 6 7999999999 6999999999999954 5678889988110 266 8 99999864 344
Q ss_pred HH-HHhCCCcc-------CCC--------------C-cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 69 IS-KTYGCYLS-------SAG--------------H-SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 69 va-~~yg~~~~-------~~g--------------~-~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.+ ..|+.... ..| + -.|++||||++|+|++.+.+.. +.+++.+.|+++.
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~----~~~~l~~~I~~ll 192 (207)
T 2r37_A 121 KEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRT----TVSNVKMDILSYM 192 (207)
T ss_dssp TCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTS----CHHHHHHHHHHHH
T ss_pred ccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 21 12221100 001 0 1379999999999999987653 2466666666654
No 93
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.30 E-value=1.6e-12 Score=96.29 Aligned_cols=99 Identities=12% Similarity=0.175 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe--cCchHHHH
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS--DSTHAISK 71 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls--D~~~~va~ 71 (145)
|..|+|.|++++ ++|+.+|++||+||.| +.+..++|++. +++ + +||+++ |.++..+.
T Consensus 61 C~~~~p~l~~l~--~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~--~~~------~---~~p~~~~~d~~~~~~~ 127 (187)
T 3dwv_A 61 TKGGYETATTLY--NKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCT--KFK------A---EFPIMAKINVNGENAH 127 (187)
T ss_dssp CTTHHHHHHHHH--HHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCB--CCC------C---SSCBBCCBCCSCC-CC
T ss_pred cHHHHHHHHHHH--HHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHh--ccC------C---CCceeeccccCCcchh
Confidence 999999999999 6999999999999986 45666776653 135 8 899997 66665442
Q ss_pred -Hh--------CCCccCCCC-cce---EEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 72 -TY--------GCYLSSAGH-SLR---AYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 72 -~y--------g~~~~~~g~-~~p---~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.| +.+ |. ..| ++||||++|+|++.+.+.. +.+++.+.|+++-
T Consensus 128 ~~~~~l~~~~~~~~----~~~~iP~~~~~~liD~~G~i~~~~~g~~----~~~~l~~~i~~lL 182 (187)
T 3dwv_A 128 PLYEYMKKTKPGIL----ATKAIKWNFTSFLIDRDGVPVERFSPGA----SVKDIEEKLIPLL 182 (187)
T ss_dssp HHHHHHHHHSCCSB----SSSSCCSTTCEEEECTTSCEEEEECTTC----CHHHHHHHHHHHC
T ss_pred HHHHHHHhhcCCcc----CCCccccceeEEEECCCCCEEEEECCCC----CHHHHHHHHHHHH
Confidence 22 332 21 367 9999999999999987653 3567777777664
No 94
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.96 E-value=2.4e-13 Score=97.18 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=77.3
Q ss_pred ChhHHHHHHHH-Hhhhhhhh-cCCcEEEEEeCCCH-HHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCc
Q psy17183 1 MDTKIACDVLK-LVRKEILI-VSPFQIIAVSVDSH-LAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 1 ~~t~e~~~~~~-~~~~~~f~-~~gv~vi~VS~D~~-~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~ 77 (145)
.|..+++.|.+ ++ ++|+ ..++.+++|+.|+. +..++|.+. ++ + +||+++|.++++++.||+..
T Consensus 47 ~C~~~~~~l~~~l~--~~~~~~~~~~vv~v~~d~~~~~~~~~~~~---~~------~---~~~~~~d~~~~~~~~~~~~~ 112 (159)
T 2ls5_A 47 VCRKEMPFIEKDIW--LKHKDNADFALIGIDRDEPLEKVLAFAKS---TG------V---TYPLGLDPGADIFAKYALRD 112 (159)
Confidence 38999999998 87 5787 78999999998864 456777775 65 8 99999999999999999752
Q ss_pred cCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccc
Q psy17183 78 SSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 78 ~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~ 123 (145)
. ..|++||||++|+|++.+.+.. ..++.+.|++++..
T Consensus 113 ~----~~P~~~lid~~G~i~~~~~g~~-----~~~l~~~l~~l~~~ 149 (159)
T 2ls5_A 113 A----GITRNVLIDREGKIVKLTRLYN-----EEEFASLVQQINEM 149 (159)
Confidence 1 3699999999999999887632 23444444444443
No 95
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.29 E-value=2e-11 Score=86.05 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSA 80 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~ 80 (145)
|..+++.|.+++ ++|...++.+++|+.|. .+..++|.+. ++ ++ .++++.|.++++++.||+.
T Consensus 45 C~~~~~~l~~l~--~~~~~~~~~~v~v~~d~~~~~~~~~~~~---~~------~~--~~~~~~d~~~~~~~~~~v~---- 107 (152)
T 2lja_A 45 CRGELPALKELE--EKYAGKDIHFVSLSCDKNKKAWENMVTK---DQ------LK--GIQLHMGTDRTFMDAYLIN---- 107 (152)
T ss_dssp GGGTHHHHHHHH--HHSTTSSEEEEEEECCSCHHHHHHHHHH---HT------CC--SEEEECSSCTHHHHHTTCC----
T ss_pred HHHHhHHHHHHH--HHhccCCeEEEEEEccCcHHHHHHHHHh---cC------CC--CceeecCcchhHHHHcCcC----
Confidence 999999999998 58888899999999875 4567777765 54 51 3578899999999999987
Q ss_pred CCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccc
Q psy17183 81 GHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 81 g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~ 123 (145)
..|++||||++|+|++...+.. +.+++.+.|+.+...
T Consensus 108 --~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 108 --GIPRFILLDRDGKIISANMTRP----SDPKTAEKFNELLGL 144 (152)
T ss_dssp --SSCCEEEECTTSCEEESSCCCT----TCHHHHHHHHHHHTC
T ss_pred --CCCEEEEECCCCeEEEccCCCC----CHHHHHHHHHHHhcc
Confidence 3799999999999998766542 346777777776643
No 96
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.28 E-value=1e-11 Score=94.08 Aligned_cols=104 Identities=11% Similarity=0.010 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHh---hcCCCCCCCCCCCCccEEecC--chH
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLT---ATSSNRSAIDPSKIVPLLSDS--THA 68 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~fpllsD~--~~~ 68 (145)
|..|+|.|++++ ++|+.+|++||+||.| +.+.+++|++.++ +++ + +||+++|. ++.
T Consensus 62 C~~e~p~l~~l~--~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~------~---~fp~l~d~d~~g~ 130 (208)
T 2f8a_A 62 TVRDYTQMNELQ--RRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFE------P---NFMLFEKCEVNGA 130 (208)
T ss_dssp HHHHHHHHHHHH--HHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCC------C---SSEEBCCCCCSST
T ss_pred HHHHHHHHHHHH--HHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccc------c---ceEEEEEeecCCC
Confidence 889999999999 6899999999999986 5678888887210 255 8 89999753 344
Q ss_pred HHH--------HhCCC---------------c-cC--CCC-cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 69 ISK--------TYGCY---------------L-SS--AGH-SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 69 va~--------~yg~~---------------~-~~--~g~-~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.+. .++.. . .. .++ ..|++||||++|+|++.+.+..+ .+++.+.|+++
T Consensus 131 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~----~~~l~~~I~~l 205 (208)
T 2f8a_A 131 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQ----TIDIEPDIEAL 205 (208)
T ss_dssp TCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred CccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCC----HHHHHHHHHHH
Confidence 321 22210 0 00 011 24999999999999999887643 34556666554
No 97
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.28 E-value=4.8e-12 Score=91.90 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC--------CCHHHHHHHH-HHHhhcCCCCCCCCCCCCccEEecC--chH-H
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV--------DSHLAHLAWT-KTLTATSSNRSAIDPSKIVPLLSDS--THA-I 69 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~--------D~~~~~~~~~-~~~~~~~~~~~~~~~~~~fpllsD~--~~~-v 69 (145)
|. +++.|++++ ++|+.+|++||+||. |+.+..++|+ +. ++ + +||+++|. ++. +
T Consensus 47 C~-~~~~l~~l~--~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~---~~------~---~~p~~~d~d~~~~~~ 111 (171)
T 3cmi_A 47 TP-QYKELEALY--KRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLN---YG------V---TFPIMKKIDVNGGNE 111 (171)
T ss_dssp HH-HHHHHHHHH--HHHGGGTEEEEEEEECSCC---------------------C------C---CSCBBCCCBSSSTTB
T ss_pred ch-hHHHHHHHH--HHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhc---cC------C---CceEEeeccCCCccc
Confidence 88 999999999 689999999999997 4566778887 64 65 8 99999874 343 2
Q ss_pred HH--------HhCCCccCCCCcce------EEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 70 SK--------TYGCYLSSAGHSLR------AYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 70 a~--------~yg~~~~~~g~~~p------~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
++ .||+. ..| ++||||++|+|++.+.|..+ .+++.+.|+++
T Consensus 112 ~~~~~~~~~~~~~v~------~~P~i~~~~~~~lid~~G~i~~~~~g~~~----~~~l~~~i~~l 166 (171)
T 3cmi_A 112 DPVYKFLKSQKSGML------GLRGIKWNFEKFLVDKKGKVYERYSSLTK----PSSLSETIEEL 166 (171)
T ss_dssp CHHHHHHHHHSCCSS------SCCSCCSTTCEEEECSSSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred hHHHHHHHhccCCcC------CCCcccccceEEEECCCCCEEEEeCCCCC----HHHHHHHHHHH
Confidence 22 34543 256 99999999999999887543 34555555544
No 98
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.25 E-value=7.2e-11 Score=84.88 Aligned_cols=90 Identities=14% Similarity=0.254 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC-CCHHHHHHHHHHHhhcCCCCCCCCCCCCcc-EEecCchHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV-DSHLAHLAWTKTLTATSSNRSAIDPSKIVP-LLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~fp-llsD~~~~va~~yg~~~~~ 79 (145)
|..+++.|.++++ + ++.+++|+. ++.+..++|.+. ++ + +|| ++.|.++++++.||+.
T Consensus 66 C~~~~~~l~~l~~--~----~v~vv~v~~~~~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~v~--- 124 (168)
T 2b1k_A 66 CRAEHQYLNQLSA--Q----GIRVVGMNYKDDRQKAISWLKE---LG------N---PYALSLFDGDGMLGLDLGVY--- 124 (168)
T ss_dssp HHHHHHHHHHHHH--T----TCCEEEEEESCCHHHHHHHHHH---HC------C---CCSEEEEETTCHHHHHHTCC---
T ss_pred HHHHHHHHHHHHH--C----CCEEEEEECCCChHHHHHHHHH---cC------C---CCceeeECcchHHHHHcCcc---
Confidence 8899999988873 2 899999996 467778888876 66 8 899 6899999999999997
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
..|++||||++|+|++.+.|..+ .+++.+.|+.
T Consensus 125 ---~~P~~~lid~~G~i~~~~~g~~~----~~~l~~~l~~ 157 (168)
T 2b1k_A 125 ---GAPETFLIDGNGIIRYRHAGDLN----PRVWEEEIKP 157 (168)
T ss_dssp ---SSSEEEEECTTSBEEEEEESCCC----HHHHHHTTHH
T ss_pred ---ccCEEEEECCCCeEEEEEeCCCC----HHHHHHHHHH
Confidence 37999999999999999887643 4455444443
No 99
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.24 E-value=1.1e-11 Score=90.93 Aligned_cols=105 Identities=9% Similarity=0.072 Sum_probs=72.9
Q ss_pred ChhHHHHHHHHHhhhhhhhcCCcEEEEEeCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEec--CchHH-
Q psy17183 1 MDTKIACDVLKLVRKEILIVSPFQIIAVSVD--------SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSD--STHAI- 69 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D--------~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD--~~~~v- 69 (145)
.|..|+|.|++++ ++|+.+|++||+||.| +++..++|+++ .++ + +||+++| ..+..
T Consensus 52 ~C~~~~p~l~~l~--~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~--~~~------~---~~~~~~~~d~~~~~~ 118 (180)
T 3kij_A 52 LTDRNYLGLKELH--KEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK--NYG------V---TFPIFHKIKILGSEG 118 (180)
T ss_dssp THHHHHHHHHHHH--HHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHH--HHC------C---CSCBBCCCCCSSTTC
T ss_pred CcHHHHHHHHHHH--HHhccCCeEEEEEECCccccCCCCCHHHHHHHHHH--hcC------C---CCceeeeeeccCccc
Confidence 4999999999999 6999999999999964 67888888774 155 8 8999874 33322
Q ss_pred --HHHhCCCccCCCCcceE----EEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 70 --SKTYGCYLSSAGHSLRA----YYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 70 --a~~yg~~~~~~g~~~p~----tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
...|.... .| ..|. +||||++|+|++.+.+..+...-.+++.+.|+++.
T Consensus 119 ~~~~~~~~~~--~~-~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~ 173 (180)
T 3kij_A 119 EPAFRFLVDS--SK-KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVI 173 (180)
T ss_dssp CHHHHHHHHH--HT-CCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHH
T ss_pred cHHHHHHHhc--CC-CCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 22221110 01 2466 99999999999999887554443455555555543
No 100
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.23 E-value=1.5e-10 Score=81.63 Aligned_cols=92 Identities=12% Similarity=0.121 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCcc-EEecCchHHHHHhCCCccC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVP-LLSDSTHAISKTYGCYLSS 79 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fp-llsD~~~~va~~yg~~~~~ 79 (145)
|..+++.|.+++. + .++.+++|+.| +.+..++|.+. ++ + +|| ++.|....+++.||+.
T Consensus 57 C~~~~~~l~~l~~--~---~~v~~v~v~~~~~~~~~~~~~~~---~~------~---~~~~~~~d~~~~~~~~~~v~--- 116 (156)
T 1kng_A 57 CHDEAPLLTELGK--D---KRFQLVGINYKDAADNARRFLGR---YG------N---PFGRVGVDANGRASIEWGVY--- 116 (156)
T ss_dssp HHHHHHHHHHHTT--C---TTSEEEEEEESCCHHHHHHHHHH---HC------C---CCSEEEEETTSHHHHHTTCC---
T ss_pred HHHHHHHHHHHHh--c---CCeEEEEEECCCCHHHHHHHHHH---cC------C---CCceeeeCchhHHHHhcCcC---
Confidence 8889999998873 3 45999999974 67778888876 76 8 899 9999999999999987
Q ss_pred CCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 80 AGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 80 ~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
..|++||||++|+|++.+.|..+ .+++.+.|+++
T Consensus 117 ---~~P~~~~id~~G~i~~~~~g~~~----~~~l~~~l~~~ 150 (156)
T 1kng_A 117 ---GVPETFVVGREGTIVYKLVGPIT----PDNLRSVLLPQ 150 (156)
T ss_dssp ---SSCEEEEECTTSBEEEEEESCCC----HHHHHHTHHHH
T ss_pred ---ccCeEEEEcCCCCEEEEEeCCCC----HHHHHHHHHHH
Confidence 37999999999999998887643 45555555443
No 101
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.14 E-value=6.5e-11 Score=83.40 Aligned_cols=98 Identities=10% Similarity=0.187 Sum_probs=75.8
Q ss_pred hhHHHHHHHHHhhhhhhh-cCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe-cCchHHHHHhCCCcc
Q psy17183 2 DTKIACDVLKLVRKEILI-VSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS-DSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~-~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls-D~~~~va~~yg~~~~ 78 (145)
|..+++.|.+++ ++|. ..+++|++||.| +.+..++|.++ ++ . . .||++. |...++++.||+.
T Consensus 43 C~~~~p~l~~l~--~~~~~~~~~~vv~v~~d~~~~~~~~~~~~---~~---~--~---~~~~~~~d~~~~~~~~~~v~-- 107 (146)
T 1o8x_A 43 ARGFTPQLIEFY--DKFHESKNFEVVFCTWDEEEDGFAGYFAK---MP---W--L---AVPFAQSEAVQKLSKHFNVE-- 107 (146)
T ss_dssp HHHHHHHHHHHH--HHHTTTTTEEEEEEECCCSHHHHHHHHTT---CS---S--E---ECCGGGHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHH--HHhhhcCCeEEEEEeCCCCHHHHHHHHHH---CC---c--e---eeccchhhHHHHHHHHhCCC--
Confidence 899999999998 5887 378999999998 46667777664 43 1 3 567665 7789999999987
Q ss_pred CCCCcceEEEEEC-CCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCC
Q psy17183 79 SAGHSLRAYYIID-KRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTT 136 (145)
Q Consensus 79 ~~g~~~p~tfIID-~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~ 136 (145)
..|++|||| ++|+|++.+.+. ....++++|..+|++
T Consensus 108 ----~~Pt~~lid~~~G~i~~~~~~~------------------~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 108 ----SIPTLIGVDADSGDVVTTRARA------------------TLVKDPEGEQFPWKD 144 (146)
T ss_dssp ----SSSEEEEEETTTCCEEESCHHH------------------HHTTCTTCTTTTCCC
T ss_pred ----CCCEEEEEECCCCeEEEecchh------------------HHhhCCccccCCCCC
Confidence 379999999 999998764321 123457889999986
No 102
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.01 E-value=4.4e-10 Score=78.48 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHhhhhhhh-cCCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEe-cCchHHHHHhCCCcc
Q psy17183 2 DTKIACDVLKLVRKEILI-VSPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLS-DSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~-~~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fplls-D~~~~va~~yg~~~~ 78 (145)
|..+++.|.+++ ++|. ..+++|++||.|. .+..++|.++ ++ . . .||+.. |...++++.||+.
T Consensus 43 C~~~~~~l~~l~--~~~~~~~~~~vv~i~~d~~~~~~~~~~~~---~~---~--~---~~~~~~~~~~~~~~~~~~v~-- 107 (144)
T 1o73_A 43 CRGFTPVLAEFY--EKHHVAKNFEVVLISWDENESDFHDYYGK---MP---W--L---ALPFDQRSTVSELGKTFGVE-- 107 (144)
T ss_dssp HHHHHHHHHHHH--HHHTTTTTEEEEEEECCSSHHHHHHHHTT---CS---S--E---ECCTTCHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHH--HHhccCCCEEEEEEeCCCCHHHHHHHHHh---CC---c--e---EeeccchhHHHHHHHHcCCC--
Confidence 899999999998 5887 4789999999985 5556666654 43 1 3 566555 6688999999987
Q ss_pred CCCCcceEEEEEC-CCCcEEEEEeecCCCCCCHHHHHHHHHhccccccCCcccCCCCCC
Q psy17183 79 SAGHSLRAYYIID-KRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDSTDTQCPVNWTT 136 (145)
Q Consensus 79 ~~g~~~p~tfIID-~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~~~~~p~~w~~ 136 (145)
..|++|||| ++|+|++.+... ++ ...+++|...|.+
T Consensus 108 ----~~Pt~~lid~~~G~i~~~~~~~--------~~----------~~~~~~~~~~W~~ 144 (144)
T 1o73_A 108 ----SIPTLITINADTGAIIGTQART--------RV----------IEDPDGANFPWPN 144 (144)
T ss_dssp ----SSSEEEEEETTTCCEEESCHHH--------HH----------HHCTTCTTTTCCC
T ss_pred ----CCCEEEEEECCCCeEEecchhh--------HH----------hhCCCccCCCCCC
Confidence 379999999 899998664221 11 2346788888863
No 103
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.00 E-value=6e-10 Score=78.05 Aligned_cols=81 Identities=9% Similarity=0.153 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHhhhhhhhc-CCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEe-cCchHHHHHhCCCcc
Q psy17183 2 DTKIACDVLKLVRKEILIV-SPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLS-DSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~-~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fplls-D~~~~va~~yg~~~~ 78 (145)
|..+++.|.+++ ++|.. .+++|++||.| +.+..++|.++ ++ . . .||++. |...++++.||+.
T Consensus 43 C~~~~~~l~~l~--~~~~~~~~~~vv~v~~d~~~~~~~~~~~~---~~---~--~---~~~~~~~d~~~~~~~~~~v~-- 107 (144)
T 1i5g_A 43 SRAFTPQLIDFY--KAHAEKKNFEVMLISWDESAEDFKDYYAK---MP---W--L---ALPFEDRKGMEFLTTGFDVK-- 107 (144)
T ss_dssp HHHHHHHHHHHH--HHHTTTTTEEEEEEECCSSHHHHHHHHTT---CS---S--E---ECCTTCHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHH--HHhccCCCEEEEEEeCCCCHHHHHHHHHh---CC---c--c---ccccCchHHHHHHHHHcCCC--
Confidence 899999999998 58874 78999999998 56777777764 43 1 3 567666 7789999999987
Q ss_pred CCCCcceEEEEEC-CCCcEEEEEe
Q psy17183 79 SAGHSLRAYYIID-KRGYLRSMNV 101 (145)
Q Consensus 79 ~~g~~~p~tfIID-~dG~I~~~~~ 101 (145)
..|++|||| ++|+|++.+.
T Consensus 108 ----~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 108 ----SIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp ----SSSEEEEEETTTCCEEESCH
T ss_pred ----CCCEEEEEECCCCcEEeccc
Confidence 379999999 9999987653
No 104
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.98 E-value=1.6e-08 Score=73.91 Aligned_cols=108 Identities=16% Similarity=0.256 Sum_probs=72.3
Q ss_pred ChhHHHHHHHHHhhhhhhhcC--CcEEEEEeCC----CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchH-H----
Q psy17183 1 MDTKIACDVLKLVRKEILIVS--PFQIIAVSVD----SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHA-I---- 69 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~~~--gv~vi~VS~D----~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~-v---- 69 (145)
.|..+++.+.+++ +.+++. ++++|+||.| +++.+++|++. ++ .... .|.+|.+...+ +
T Consensus 47 ~Cp~~~~~l~~l~--~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~---~~---~~~~---~~~~ltg~~~~~~~~~~ 115 (170)
T 4hde_A 47 VCPPMTANMAKLQ--KMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK---FT---EDTS---NWNLLTGYSLEDITKFS 115 (170)
T ss_dssp SHHHHHHHHHHHH--HHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT---TC---SCCT---TEEEEBCSCHHHHHHHH
T ss_pred cccHHHHHHHHHH--HhhhcccccceeEeeecCcccccHHHHHHHHHH---cC---CCCC---CceecCcccHHHHHHHH
Confidence 3888888888877 467544 5889999975 68889999886 54 1113 56677775433 2
Q ss_pred HHHhCCCccC--CCC--cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 70 SKTYGCYLSS--AGH--SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 70 a~~yg~~~~~--~g~--~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
...|+..... .|. -.+++||||++|+|+..+.+... .+.+++++.|++|.
T Consensus 116 ~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~--~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 116 KDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISN--TPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSS--CCHHHHHHHHHHHH
T ss_pred HhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCC--CCHHHHHHHHHHHh
Confidence 2334443221 121 14789999999999988876432 35788888888764
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.51 E-value=6.4e-11 Score=82.44 Aligned_cols=85 Identities=25% Similarity=0.300 Sum_probs=65.5
Q ss_pred ChhHHHHHHHHHhhhhhhh--cCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCc
Q psy17183 1 MDTKIACDVLKLVRKEILI--VSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYL 77 (145)
Q Consensus 1 ~~t~e~~~~~~~~~~~~f~--~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~ 77 (145)
.|..+++.|.+++ ++|+ ..++.+++||.| +.+..++|.+. ++ ++-..+|+..|..+++++.||+.
T Consensus 40 ~C~~~~~~l~~~~--~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~v~- 107 (143)
T 2lus_A 40 PCRGFTPILADMY--SELVDDSAPFEIIFVSSDRSEDDMFQYMME---SH------GDWLAIPYRSGPASNVTAKYGIT- 107 (143)
Confidence 3899999999998 5784 358999999998 45566777665 54 40003556678888999999987
Q ss_pred cCCCCcceEEEEECCCCcEEEEEee
Q psy17183 78 SSAGHSLRAYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 78 ~~~g~~~p~tfIID~dG~I~~~~~~ 102 (145)
..|++||||++|+|++.+..
T Consensus 108 -----~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 108 -----GIPALVIVKKDGTLISMNGR 127 (143)
Confidence 37999999999999988644
No 106
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.90 E-value=2.5e-09 Score=77.55 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHhhhhhhhc-CCcEEEEEeCCC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCc-hHHHHHhCCCcc
Q psy17183 2 DTKIACDVLKLVRKEILIV-SPFQIIAVSVDS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDST-HAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~-~gv~vi~VS~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~-~~va~~yg~~~~ 78 (145)
|..+++.|.+++ ++|+. .++.||+|+.|. .+..++|.++ ++ . . .||+..+.. +++++.||+.
T Consensus 63 C~~~~p~l~~l~--~~~~~~~~v~vv~v~~d~~~~~~~~~~~~---~~---~--~---~~~~~~~~~~~~l~~~~~v~-- 127 (165)
T 3s9f_A 63 CRGFTPQLVEFY--EKHHDSKNFEIILASWDEEEDDFNAYYAK---MP---W--L---SIPFANRNIVEALTKKYSVE-- 127 (165)
T ss_dssp HHHHHHHHHHHH--HHHTTTTTEEEEEEECCCSHHHHHHHHTT---CS---S--E---ECCTTCHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHH--HHhccCCCeEEEEEecCCCHHHHHHHHHh---CC---C--c---ccccCchhHHHHHHHHcCCC--
Confidence 999999999999 68876 789999999875 4556666664 43 1 3 566655544 8999999987
Q ss_pred CCCCcceEEEEECCC-CcEEEEEe
Q psy17183 79 SAGHSLRAYYIIDKR-GYLRSMNV 101 (145)
Q Consensus 79 ~~g~~~p~tfIID~d-G~I~~~~~ 101 (145)
..|++||||++ |+|++...
T Consensus 128 ----~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 128 ----SIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp ----SSSEEEEEETTTCCEEESCH
T ss_pred ----CCCEEEEEeCCCCEEEeccc
Confidence 47999999998 99987654
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.26 E-value=1.1e-06 Score=62.68 Aligned_cols=86 Identities=8% Similarity=0.032 Sum_probs=63.1
Q ss_pred hhHHHHHH---HHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCcc
Q psy17183 2 DTKIACDV---LKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLS 78 (145)
Q Consensus 2 ~t~e~~~~---~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~ 78 (145)
|..++|.| .++. ++...++.++.|+.+... + + +|++ .|.+.++++.|++.
T Consensus 63 C~~~~p~l~~~~~~~---~~~~~~~~~v~vd~~~~~------------~------~---~~~~-~~~~~~l~~~~~v~-- 115 (154)
T 2ju5_A 63 CIKMQDQILQSSEFK---HFAGVHLHMVEVDFPQKN------------H------Q---PEEQ-RQKNQELKAQYKVT-- 115 (154)
T ss_dssp HHHHHHHTTTSHHHH---HHHHHHCEEEEEECCSSC------------C------C---CHHH-HHHHHHHHHHTTCC--
T ss_pred HHHHHHHHhcCHHHH---HHhcCcEEEEEecCcccc------------C------C---Chhh-HhhHHHHHHHcCCC--
Confidence 88888888 4443 233346888888776421 2 5 6664 67888999999997
Q ss_pred CCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 79 SAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 79 ~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
..|++||+|++|++++.. |.. ..+.+++++.|+++.
T Consensus 116 ----~~Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 116 ----GFPELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKSAL 151 (154)
T ss_dssp ----SSSEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHHHH
T ss_pred ----CCCEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHHHH
Confidence 379999999999999988 764 235788888887654
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.10 E-value=2.8e-05 Score=52.83 Aligned_cols=51 Identities=10% Similarity=0.154 Sum_probs=38.9
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
|.+.++++.||+. ..|+++++|++|++++.+.|.. +.+++.+.|+.+....
T Consensus 69 d~~~~~~~~~~v~------~~Pt~~~~~~~G~~~~~~~G~~----~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 69 EKNIDLAYKYDAN------IVPTTVFLDKEGNKFYVHQGLM----RKNNIETILNSLGVKE 119 (126)
T ss_dssp SHHHHHHHHTTCC------SSSEEEEECTTCCEEEEEESCC----CHHHHHHHHHHHCCCC
T ss_pred CchHHHHHHcCCc------ceeEEEEECCCCCEEEEecCCC----CHHHHHHHHHHHhccc
Confidence 3445677888877 3799999999999999887753 4678888888776443
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.71 E-value=5.7e-05 Score=52.23 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=37.8
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEE--EEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR--SMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~--~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
|...++++.||+. ..|+++++|++|+++ +.+.|.. +.+++.+.|+.++..-
T Consensus 78 ~~~~~l~~~~~v~------~~Pt~~~~d~~G~~v~~~~~~G~~----~~~~l~~~l~~~~~~~ 130 (134)
T 2fwh_A 78 AQDVALLKHLNVL------GLPTILFFDGQGQEHPQARVTGFM----DAETFSAHLRDRQPHH 130 (134)
T ss_dssp HHHHHHHHHTTCC------SSSEEEEECTTSCBCGGGCBCSCC----CHHHHHHHHHHC----
T ss_pred chHHHHHHHcCCC------CCCEEEEECCCCCEeeeeeeeecc----CHHHHHHHHHhcCccc
Confidence 4467789999987 379999999999997 5666653 4788999998887543
No 110
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.29 E-value=0.0024 Score=42.23 Aligned_cols=47 Identities=17% Similarity=0.254 Sum_probs=36.6
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|.+.++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.++.+.
T Consensus 58 ~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~~ 104 (112)
T 2voc_A 58 DENQETAGKYGVM------SIPTLLVL-KDGEVVETSVGFK----PKEALQELVNKHL 104 (112)
T ss_dssp TTCCSHHHHTTCC------SBSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHTTS
T ss_pred CCCHHHHHHcCCC------cccEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHHH
Confidence 4455678889987 37999999 9999998888764 4678888887655
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.27 E-value=0.00064 Score=46.31 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=39.5
Q ss_pred cCchHHHHHhCC---CccCCCCcceEEEEECCCCcEEEEEeecC-CC--CCCHHHHHHHHHhcc
Q psy17183 64 DSTHAISKTYGC---YLSSAGHSLRAYYIIDKRGYLRSMNVSDI-QV--GRNLKEILRQVEAFQ 121 (145)
Q Consensus 64 D~~~~va~~yg~---~~~~~g~~~p~tfIID~dG~I~~~~~~~~-~~--~~~~~ell~~i~~l~ 121 (145)
|...++++.||+ . ..|+++++|++|++++...|.. .. ....+++.+.|+.+.
T Consensus 75 ~~~~~l~~~~~v~~~~------~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQD------GIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSSHHHHHHTTCGGGG------CSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccCC------ccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 667889999998 5 4799999999999999987732 11 235677777777654
No 112
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.001 Score=44.90 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=38.9
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
....+++.||+. ..|+++++|++|++++...|.. +.+++.+.|+++..
T Consensus 74 ~~~~~~~~~~v~------~~Pt~~~~d~~G~~~~~~~G~~----~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 74 EGVELRKKYGVH------AYPTLLFINSSGEVVYRLVGAE----DAPELLKKVKLGVE 121 (130)
T ss_dssp THHHHHHHTTCC------SSCEEEEECTTSCEEEEEESCC----CHHHHHHHHHHHHS
T ss_pred chHHHHHHcCCC------CCCEEEEECCCCcEEEEecCCC----CHHHHHHHHHHHHH
Confidence 467899999987 3799999999999998887763 46788888877653
No 113
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.13 E-value=0.0064 Score=39.08 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=37.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 60 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 106 (107)
T 2i4a_A 60 IDDNPETPNAYQVR------SIPTLMLV-RDGKVIDKKVGAL----PKSQLKAWVESA 106 (107)
T ss_dssp TTTCCHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHT
T ss_pred CCCCHHHHHhcCCC------ccCEEEEE-eCCEEEEEecCCC----CHHHHHHHHHhc
Confidence 46678899999987 37999999 9999998877753 467888877764
No 114
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.09 E-value=0.0048 Score=42.28 Aligned_cols=48 Identities=13% Similarity=0.268 Sum_probs=36.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+++++|++|+++ .+.|. .+.+++.+.|+++.
T Consensus 78 ~~~~~~l~~~~~v~------~~Pt~~~~~~~G~~~-~~~G~----~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 78 TEKEQELAGAFGIR------SIPSILFIPMEGKPE-MAQGA----MPKASFKKAIDEFL 125 (136)
T ss_dssp TTTCHHHHHHTTCC------SSCEEEEECSSSCCE-EEESC----CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCC------CCCEEEEECCCCcEE-EEeCC----CCHHHHHHHHHHHh
Confidence 45677889999987 379999999999987 45554 34677777776654
No 115
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.08 E-value=0.0053 Score=41.93 Aligned_cols=50 Identities=10% Similarity=0.277 Sum_probs=37.3
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+-.|.+.++++.||+. ..|+++++|++|+++ .+.|. .+.+++.+.|+.+-
T Consensus 89 v~~~~~~~~~~~~~v~------~~Pt~~~~~~~g~~~-~~~G~----~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 89 VNVDKEPELARDFGIQ------SIPTIWFVPMKGEPQ-VNMGA----LSKEQLKGYIDKVL 138 (141)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEECSSSCCE-EEESC----CCHHHHHHHHHHTT
T ss_pred EECCCCHHHHHHcCCC------CcCEEEEEeCCCCEE-EEeCC----CCHHHHHHHHHHHH
Confidence 3345567788889987 379999999999987 55554 34678888887653
No 116
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.08 E-value=0.0064 Score=39.63 Aligned_cols=48 Identities=15% Similarity=0.170 Sum_probs=37.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+++++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 65 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~~----~~~~l~~~l~~~l 112 (115)
T 1thx_A 65 IDPNPTTVKKYKVE------GVPALRLV-KGEQILDSTEGVI----SKDKLLSFLDTHL 112 (115)
T ss_dssp STTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred cCCCHHHHHHcCCC------ceeEEEEE-cCCEEEEEecCCC----CHHHHHHHHHHHh
Confidence 46677889999987 37999999 9999998877753 4677777776653
No 117
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.08 E-value=0.0055 Score=39.45 Aligned_cols=47 Identities=13% Similarity=0.170 Sum_probs=36.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 57 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 103 (105)
T 1nsw_A 57 VDENPETTSQFGIM------SIPTLILF-KGGRPVKQLIGYQ----PKEQLEAQLADV 103 (105)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHTTTT
T ss_pred CcCCHHHHHHcCCc------cccEEEEE-eCCeEEEEEecCC----CHHHHHHHHHHH
Confidence 46678889999987 37999999 9999998887763 357777777654
No 118
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.07 E-value=0.0063 Score=39.81 Aligned_cols=44 Identities=14% Similarity=0.219 Sum_probs=33.8
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.+.++++.|++. ..|+ |+++++|+++..+.|. +.+++.+.|+++
T Consensus 66 ~~~~~~~~~~v~------~~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (111)
T 2pu9_C 66 ENKTLAKELGIR------VVPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 109 (111)
T ss_dssp TTHHHHHHHCCS------BSSE-EEEESSSSEEEEEESS-----CHHHHHHHHHHH
T ss_pred chHHHHHHcCCC------eeeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 567889999987 3687 7788999999887765 256777777654
No 119
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.04 E-value=0.0012 Score=45.58 Aligned_cols=81 Identities=7% Similarity=-0.043 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|..++|.|.++. ++|. +.++.|+.++.... .. .|...++++.||+.
T Consensus 46 C~~~~p~l~~l~--~~~~---v~~~~vd~~~~~~~-~~-----------------------~d~~~~l~~~~~v~----- 91 (135)
T 3emx_A 46 CHRDWPQLIQAS--KEVD---VPIVMFIWGSLIGE-RE-----------------------LSAARLEMNKAGVE----- 91 (135)
T ss_dssp HHHHHHHHHHHH--TTCC---SCEEEEEECTTCCH-HH-----------------------HHHHHHHHHHHTCC-----
T ss_pred hhHhChhHHHHH--HHCC---CEEEEEECCCchhh-hh-----------------------hhhhHHHHHHcCCc-----
Confidence 677777777776 3443 67777766432111 00 13446778899987
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
..|+.+++ ++|+++..+.|..+ .+.+.+.++++..
T Consensus 92 -~~Pt~~~~-~~G~~v~~~~G~~~----~~~~~~~i~~~~~ 126 (135)
T 3emx_A 92 -GTPTLVFY-KEGRIVDKLVGATP----WSLKVEKAREIYG 126 (135)
T ss_dssp -SSSEEEEE-ETTEEEEEEESCCC----HHHHHHHHHHHC-
T ss_pred -eeCeEEEE-cCCEEEEEEeCCCC----HHHHHHHHHHHhC
Confidence 37955555 59999999888743 4555566666653
No 120
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.97 E-value=0.0005 Score=49.07 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=35.7
Q ss_pred EEecCchHH-HHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAI-SKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~v-a~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.+.|..+.+ ++.|++. ..|+++|||++|++++...|..+ +.+++++.|++.
T Consensus 113 ~~~~~~~~~~~~~~~v~------~~Pt~~lid~~G~~~~~~~G~~~---~~~~l~~~l~~~ 164 (172)
T 3f9u_A 113 TVGDKWSYLQRVKFGAN------AQPFYVLIDNEGNPLNKSYAYDE---DISKYINFLQTG 164 (172)
T ss_dssp EHHHHHHHHHHHHHSCC------CSSEEEEECTTSCBSSCCBCSCC---CHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHcCCC------CcceEEEECCCCCEEeeccCCCC---CHHHHHHHHHHH
Confidence 344444444 5889988 37999999999999988777642 256666655543
No 121
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.96 E-value=0.013 Score=37.75 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=36.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 59 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 105 (107)
T 1dby_A 59 TDESPNVASEYGIR------SIPTIMVF-KGGKKCETIIGAV----PKATIVQTVEKY 105 (107)
T ss_dssp TTTCHHHHHHHTCC------SSCEEEEE-SSSSEEEEEESCC----CHHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCC------cCCEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 46678899999987 36987776 8999998888764 356777777654
No 122
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.88 E-value=0.011 Score=38.17 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=36.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.||+. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 60 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 106 (108)
T 2trx_A 60 IDQNPGTAPKYGIR------GIPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 106 (108)
T ss_dssp TTTCTTHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc------ccCEEEEE-eCCEEEEEEecCC----CHHHHHHHHHHh
Confidence 45677889999987 37999999 8999998877763 467777777654
No 123
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.87 E-value=0.011 Score=39.37 Aligned_cols=47 Identities=11% Similarity=0.119 Sum_probs=36.7
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 71 ~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 117 (119)
T 1w4v_A 71 IDDHTDLAIEYEVS------AVPTVLAM-KNGDVVDKFVGIK----DEDQLEAFLKKL 117 (119)
T ss_dssp TTTTHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCC------cccEEEEE-eCCcEEEEEcCCC----CHHHHHHHHHHH
Confidence 56678899999988 37999999 8999988777653 467777777654
No 124
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=96.82 E-value=0.018 Score=36.76 Aligned_cols=47 Identities=13% Similarity=0.174 Sum_probs=36.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|+.+++ ++|+++....|. .+.+++.+.|+++
T Consensus 59 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 105 (106)
T 3die_A 59 VDENPSTAAKYEVM------SIPTLIVF-KDGQPVDKVVGF----QPKENLAEVLDKH 105 (106)
T ss_dssp TTTCHHHHHHTTCC------SBSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred CCcCHHHHHhCCCc------ccCEEEEE-eCCeEEEEEeCC----CCHHHHHHHHHHh
Confidence 45677888999987 37998888 599999887775 3467888887654
No 125
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.77 E-value=0.016 Score=36.67 Aligned_cols=49 Identities=24% Similarity=0.304 Sum_probs=37.3
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 53 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~ 101 (104)
T 2e0q_A 53 LNSDENPDIAARYGVM------SLPTVIFF-KDGEPVDEIIGAV----PREEIEIRIKNL 101 (104)
T ss_dssp EETTTCHHHHHHTTCC------SSCEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred EECCCCHHHHHhCCcc------ccCEEEEE-ECCeEhhhccCCC----CHHHHHHHHHHH
Confidence 3346778899999987 37999999 8999998877753 467777777654
No 126
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.76 E-value=0.0067 Score=41.38 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=36.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 80 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 126 (128)
T 2o8v_B 80 IDQNPGTAPKYGIR------GIPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 126 (128)
T ss_dssp TTTCCTTSGGGTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCC------ccCEEEEE-eCCEEEEEEcCCC----CHHHHHHHHHHh
Confidence 45566788889987 37999999 9999998887763 467777777654
No 127
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.76 E-value=0.015 Score=37.90 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=35.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.||+. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 63 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 109 (112)
T 1t00_A 63 IDENPGTAAKYGVM------SIPTLNVY-QGGEVAKTIVGAK----PKAAIVRDLEDF 109 (112)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHTHHH
T ss_pred cCCCHHHHHhCCCC------cccEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 46678899999987 36886666 8999998887763 357777777654
No 128
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.74 E-value=0.0062 Score=41.18 Aligned_cols=46 Identities=9% Similarity=0.192 Sum_probs=35.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
.|...++++.|++. ..|+++++ ++|+++..+.|. .+.+++.+.|++
T Consensus 82 ~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 127 (128)
T 3ul3_B 82 LDKNESLARKFSVK------SLPTIILL-KNKTMLARKDHF----VSSNDLIALIKK 127 (128)
T ss_dssp GGGCHHHHHHTTCC------SSSEEEEE-ETTEEEEEESSC----CCHHHHHHHHTT
T ss_pred CCCCHHHHHHcCCC------CcCEEEEE-ECCEEEEEecCC----CCHHHHHHHHHh
Confidence 44556778889887 37999999 799998887765 346788887754
No 129
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.74 E-value=0.013 Score=39.01 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=33.9
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.+.++++.||+. ..|+ |+++++|+++..+.|.. .+++.+.|+++.
T Consensus 79 ~~~~~~~~~~v~------~~Pt-~~~~~~G~~~~~~~G~~-----~~~l~~~i~~~~ 123 (124)
T 1faa_A 79 ENKTLAKELGIR------VVPT-FKILKENSVVGEVTGAK-----YDKLLEAIQAAR 123 (124)
T ss_dssp TTHHHHHHHCCS------SSSE-EEEEETTEEEEEEESSC-----HHHHHHHHHHHT
T ss_pred chHHHHHHcCCC------eeeE-EEEEeCCcEEEEEcCCC-----HHHHHHHHHHhh
Confidence 467889999987 3687 66679999998877652 577777777653
No 130
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.72 E-value=0.022 Score=36.40 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=38.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 58 ~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~l 105 (109)
T 2yzu_A 58 VDENPKTAMRYRVM------SIPTVILF-KDGQPVEVLVGAQ----PKRNYQAKIEKHL 105 (109)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHTTC
T ss_pred CCCCHhHHHhCCCC------cCCEEEEE-eCCcEeeeEeCCC----CHHHHHHHHHHHh
Confidence 46678899999987 37999999 9999998877753 4678888887764
No 131
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.68 E-value=0.02 Score=38.03 Aligned_cols=48 Identities=10% Similarity=0.168 Sum_probs=36.5
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.||+. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 68 vd~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 115 (116)
T 3qfa_C 68 VDVDDCQDVASECEVK------SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 115 (116)
T ss_dssp EETTTTHHHHHHTTCC------SSSEEEEE-SSSSEEEEEESC-----CHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCc------cccEEEEE-eCCeEEEEEcCC-----CHHHHHHHHHHh
Confidence 3356788899999987 37998888 899998887765 367777777653
No 132
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.62 E-value=0.0094 Score=39.88 Aligned_cols=51 Identities=20% Similarity=0.251 Sum_probs=38.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECC---CCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDK---RGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~---dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
.|...++++.|++. ..|++++++. +|+++....|.. .+++.+.++......
T Consensus 62 ~~~~~~~~~~~~i~------~~Pt~~~~~~~~~~G~~~~~~~G~~-----~~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 62 VDKNGNAADAYGVS------SIPALFFVKKEGNEIKTLDQFVGAD-----VSRIKADIEKFKHHH 115 (118)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEEEEETTEEEEEEEEESCC-----HHHHHHHHHHHC---
T ss_pred CCCCHHHHHhcCCC------CCCEEEEEeCCCCcceEEEeecCCC-----HHHHHHHHHHhhhcc
Confidence 56678899999987 3799999976 499998888764 467778887776543
No 133
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.62 E-value=0.02 Score=40.38 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=36.9
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 104 ~~~~~~l~~~~~i~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l 151 (155)
T 2ppt_A 104 TQAHPAVAGRHRIQ------GIPAFILF-HKGRELARAAGAR----PASELVGFVRGKL 151 (155)
T ss_dssp TTTSTHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred CCccHHHHHHcCCC------cCCEEEEE-eCCeEEEEecCCC----CHHHHHHHHHHHh
Confidence 45567889999987 47999998 8999998877753 4677777776643
No 134
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.61 E-value=0.015 Score=38.87 Aligned_cols=48 Identities=15% Similarity=0.168 Sum_probs=35.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
.|.+.++++.|++. ..|+++++ ++|++ ..+.|. .+.+++.+.|+++..
T Consensus 63 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~-~~~~G~----~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 63 VTEQPGLSGRFIIN------ALPTIYHC-KDGEF-RRYQGP----RTKKDFINFISDKEW 110 (126)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEE-EECCSC----CCHHHHHHHHHTCGG
T ss_pred CcCCHHHHHHcCCc------ccCEEEEE-eCCeE-EEeecC----CCHHHHHHHHHHHhh
Confidence 34566778889887 37999999 89986 344443 457889998887764
No 135
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.59 E-value=0.027 Score=36.04 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=38.6
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 59 v~~~~~~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~ 107 (109)
T 3tco_A 59 LNVDENQKIADKYSVL------NIPTTLIF-VNGQLVDSLVGAV----DEDTLESTVNKY 107 (109)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred EccccCHHHHHhcCcc------cCCEEEEE-cCCcEEEeeeccC----CHHHHHHHHHHH
Confidence 3356788899999987 37999999 9999998887763 467788877664
No 136
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.59 E-value=0.026 Score=36.54 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=34.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 64 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (112)
T 1ep7_A 64 VDAVAAVAEAAGIT------AMPTFHVY-KDGVKADDLVGA-----SQDKLKALVAKH 109 (112)
T ss_dssp TTTTHHHHHHHTCC------BSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHH
T ss_pred CCchHHHHHHcCCC------cccEEEEE-ECCeEEEEEcCC-----CHHHHHHHHHHH
Confidence 46678899999987 36885555 899999887764 356777777654
No 137
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.58 E-value=0.018 Score=39.19 Aligned_cols=49 Identities=12% Similarity=0.230 Sum_probs=35.9
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=.|...++++.||+. ..|+++++ ++|+++..+.|. . .+++.+.|+++.
T Consensus 83 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-~----~~~l~~~l~~~~ 131 (139)
T 3d22_A 83 IDVDELSDFSASWEIK------ATPTFFFL-RDGQQVDKLVGA-N----KPELHKKITAIL 131 (139)
T ss_dssp EETTTSHHHHHHTTCC------EESEEEEE-ETTEEEEEEESC-C----HHHHHHHHHHHH
T ss_pred EeCcccHHHHHHcCCC------cccEEEEE-cCCeEEEEEeCC-C----HHHHHHHHHHHh
Confidence 3356788899999987 37987777 999999888775 2 456666665543
No 138
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.58 E-value=0.017 Score=37.39 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=30.3
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|.+.++++.|++. ..|+++++ ++|+++....|.. +.+++.+.|+++
T Consensus 55 vd~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~~----~~~~l~~~l~~~ 103 (105)
T 4euy_A 55 ILLQDMQEIAGRYAVF------TGPTVLLF-YNGKEILRESRFI----SLENLERTIQLF 103 (105)
T ss_dssp EEECCC---------C------CCCEEEEE-ETTEEEEEEESSC----CHHHHHHHHHTT
T ss_pred EECCCCHHHHHhcCCC------CCCEEEEE-eCCeEEEEEeCCc----CHHHHHHHHHHh
Confidence 3356677888899987 47999999 5999998887763 478888888765
No 139
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.016 Score=37.81 Aligned_cols=46 Identities=20% Similarity=0.241 Sum_probs=33.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.||+. ..|+++++ ++|+++..+.|.. .+++.+.|+++
T Consensus 62 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~-----~~~l~~~l~~~ 107 (112)
T 3d6i_A 62 ADENSEISELFEIS------AVPYFIII-HKGTILKELSGAD-----PKEYVSLLEDC 107 (112)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEECSCC-----HHHHHHHHHHH
T ss_pred cccCHHHHHHcCCC------cccEEEEE-ECCEEEEEecCCC-----HHHHHHHHHHH
Confidence 45677889999987 37998887 7999998877653 34566666554
No 140
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.56 E-value=0.02 Score=38.59 Aligned_cols=48 Identities=10% Similarity=0.269 Sum_probs=35.4
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 75 vd~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 122 (124)
T 1xfl_A 75 VDTDELKSVASDWAIQ------AMPTFMFL-KEGKILDKVVGA-----KKDELQSTIAKH 122 (124)
T ss_dssp EETTTSHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHH
T ss_pred EECccCHHHHHHcCCC------ccCEEEEE-ECCEEEEEEeCC-----CHHHHHHHHHHh
Confidence 3356678899999987 36886666 899999887763 356777777654
No 141
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.55 E-value=0.012 Score=39.36 Aligned_cols=46 Identities=13% Similarity=0.231 Sum_probs=34.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.|++. ..|+.+++ ++|+++....|. +.+++.+.|+++
T Consensus 74 ~d~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 119 (121)
T 2j23_A 74 VDEQSQIAQEVGIR------AMPTFVFF-KNGQKIDTVVGA-----DPSKLQAAITQH 119 (121)
T ss_dssp TTTCHHHHHHHTCC------SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CcCCHHHHHHcCCC------cccEEEEE-ECCeEEeeEcCC-----CHHHHHHHHHHh
Confidence 45677889999987 36988877 699998887765 357777777654
No 142
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.53 E-value=0.0026 Score=44.95 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=34.5
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 77 ~d~~~~la~~~~V~------~iPT~~~f-k~G~~v~~~~G~~----~~~~l~~~i~~~l 124 (142)
T 2es7_A 77 LEQSEAIGDRFNVR------RFPATLVF-TDGKLRGALSGIH----PWAELLTLMRSIV 124 (142)
T ss_dssp HHHHHHHHHTTTCC------SSSEEEEE-SCC----CEESCC----CHHHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCC------cCCeEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHHh
Confidence 56678899999988 47999999 9999998887763 4577777776654
No 143
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.51 E-value=0.013 Score=40.24 Aligned_cols=66 Identities=12% Similarity=0.067 Sum_probs=41.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccC--CcccCCCCCCCCC
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDST--DTQCPVNWTTGQP 139 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~--~~~~p~~w~~~~~ 139 (145)
.|...++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++...... ....|++|.-+.+
T Consensus 64 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 131 (140)
T 3hz4_A 64 IATNPWTAEKYGVQ------GTPTFKFF-CHGRPVWEQVGQI----YPSILKNAVRDMLQHGEECIRKSTPVGQDITGY 131 (140)
T ss_dssp TTTCHHHHHHHTCC------EESEEEEE-ETTEEEEEEESSC----CHHHHHHHHHHHHHHHHHHHHTSBC--------
T ss_pred CCcCHhHHHHCCCC------cCCEEEEE-eCCcEEEEEcCCC----CHHHHHHHHHHHhcccccCcccccccCccceee
Confidence 56788899999987 37977777 8999988887763 467777777666532211 3568888875544
No 144
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.48 E-value=0.024 Score=37.93 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=36.5
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+++++++ |+++..+.|. ++.+++.+.|+++.
T Consensus 69 ~~~~~~l~~~~~v~------~~Pt~~~~~~-g~~~~~~~G~----~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 69 ATVNQVLASRYGIR------GFPTIKIFQK-GESPVDYDGG----RTRSDIVSRALDLF 116 (133)
T ss_dssp TTTCCHHHHHHTCC------SSSEEEEEET-TEEEEEECSC----CSHHHHHHHHHHHH
T ss_pred CCCCHHHHHhCCCC------eeCeEEEEeC-CCceEEecCC----CCHHHHHHHHHHHh
Confidence 45677899999987 3799999987 8887777665 34677877776654
No 145
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.37 E-value=0.049 Score=34.61 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=36.4
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+-.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 56 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~G~~----~~~~l~~~l~~~ 104 (105)
T 1fb6_A 56 LNTDEAPGIATQYNIR------SIPTVLFF-KNGERKESIIGAV----PKSTLTDSIEKY 104 (105)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEEECC----CHHHHHHHHHHH
T ss_pred EcCcchHHHHHhCCCC------cccEEEEE-eCCeEEEEEecCC----CHHHHHHHHHhh
Confidence 3356678899999987 36986666 8999998888764 356777777653
No 146
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.26 E-value=0.037 Score=36.22 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=37.0
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+-.|...++++.|++. ..|+.++++ +|+++....|. +.+++.+.|+++
T Consensus 61 vd~~~~~~l~~~~~v~------~~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~ 108 (109)
T 3f3q_A 61 LDVDELGDVAQKNEVS------AMPTLLLFK-NGKEVAKVVGA-----NPAAIKQAIAAN 108 (109)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCC------ccCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHhh
Confidence 4466788999999988 379999997 99999888776 246777777654
No 147
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.26 E-value=0.041 Score=36.49 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=34.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
.|.+.++++.|++. ..|+.+++ ++|+++....|.. .+++.+.|++
T Consensus 69 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~-----~~~l~~~l~~ 113 (114)
T 2oe3_A 69 VDESPDIAKECEVT------AMPTFVLG-KDGQLIGKIIGAN-----PTALEKGIKD 113 (114)
T ss_dssp TTTCHHHHHHTTCC------SBSEEEEE-ETTEEEEEEESSC-----HHHHHHHHHT
T ss_pred CCCCHHHHHHCCCC------cccEEEEE-eCCeEEEEEeCCC-----HHHHHHHHHh
Confidence 56677899999987 36887665 9999998877752 5677777764
No 148
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.25 E-value=0.039 Score=37.96 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=36.5
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+++++ ++|+++..+.|.. +.+++.+.|+++-
T Consensus 95 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l 142 (148)
T 3p2a_A 95 TEAEPALSTRFRIR------SIPTIMLY-RNGKMIDMLNGAV----PKAPFDNWLDEQL 142 (148)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEESSCC----CHHHHHHHHHHHH
T ss_pred CcCCHHHHHHCCCC------ccCEEEEE-ECCeEEEEEeCCC----CHHHHHHHHHHHh
Confidence 55677889999987 37998888 7999998777653 4677777776654
No 149
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.20 E-value=0.037 Score=36.20 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=33.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 65 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 110 (112)
T 1syr_A 65 VDEVSEVTEKENIT------SMPTFKVY-KNGSSVDTLLGA-----NDSALKQLIEKY 110 (112)
T ss_dssp TTTTHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHTT
T ss_pred CCCCHHHHHHcCCC------cccEEEEE-ECCcEEEEEeCC-----CHHHHHHHHHHh
Confidence 45567889999987 36875555 799998877664 367788877765
No 150
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.19 E-value=0.048 Score=35.96 Aligned_cols=48 Identities=17% Similarity=0.300 Sum_probs=35.1
Q ss_pred EecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 62 LSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 62 lsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
=.|.+.++++.||+. ..|+.+++ ++|+++..+.|.. .+++.+.|+++.
T Consensus 72 d~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~-----~~~l~~~l~~~l 119 (122)
T 2vlu_A 72 DVDELKPIAEQFSVE------AMPTFLFM-KEGDVKDRVVGAI-----KEELTAKVGLHA 119 (122)
T ss_dssp ETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESSC-----HHHHHHHHHHHH
T ss_pred ECCCCHHHHHHcCCC------cccEEEEE-eCCEEEEEEeCcC-----HHHHHHHHHHHh
Confidence 346678899999987 36876555 8999998877653 566777776543
No 151
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.18 E-value=0.048 Score=38.00 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=38.2
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~ 123 (145)
.|...++++.||+. ..|++++++ +|+++....|. +.+++.+.|+++...
T Consensus 71 ~~~~~~l~~~~~v~------~~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 71 AEGVPEVSEKYEIS------SVPTFLFFK-NSQKIDRLDGA-----HAPELTKKVQRHASS 119 (153)
T ss_dssp TTTSHHHHHHTTCC------SSSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHHSCT
T ss_pred CCCCHHHHHHcCCC------CCCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHHHhcc
Confidence 56678899999987 379999998 99998877764 356788888776543
No 152
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.17 E-value=0.053 Score=36.91 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=37.7
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=.|...++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 88 vd~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~i~~~l 137 (140)
T 1v98_A 88 VNVDEHPGLAARYGVR------SVPTLVLF-RRGAPVATWVGAS----PRRVLEERLRPYL 137 (140)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHCCCC------ccCEEEEE-eCCcEEEEEeCCC----CHHHHHHHHHHHH
Confidence 3356678899999987 37998888 8999998887763 3677777776543
No 153
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.10 E-value=0.024 Score=39.81 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=35.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEE---------EEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR---------SMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~---------~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.|++. ..|+++ ++++|+++ ....|. ..+.+++.+.|+.+-
T Consensus 63 ~d~~~~l~~~~~v~------~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~---~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 63 VDQTAVYTQYFDIS------YIPSTV-FFFNGQHMKVDYGSPDHTKFVGS---FKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTTCCHHHHHTTCC------SSSEEE-EEETTEEEEEECSSSCCSCEESC---CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHcCCC------ccCeEE-EEECCeEEEeecCCCCCCeEeee---cCCHHHHHHHHHHHH
Confidence 46677889999987 379988 66899999 444441 134677777777664
No 154
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.08 E-value=0.063 Score=34.51 Aligned_cols=49 Identities=8% Similarity=0.165 Sum_probs=37.6
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 60 vd~~~~~~l~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~ 108 (111)
T 3gnj_A 60 VDVEEEKTLFQRFSLK------GVPQILYF-KDGEYKGKMAGDV----EDDEVEQMIADV 108 (111)
T ss_dssp EETTTCHHHHHHTTCC------SSCEEEEE-ETTEEEEEEESSC----CHHHHHHHHHHH
T ss_pred EECCcChhHHHhcCCC------cCCEEEEE-ECCEEEEEEeccC----CHHHHHHHHHHH
Confidence 3356788899999987 37999999 8999988877763 467777777654
No 155
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.04 E-value=0.034 Score=37.16 Aligned_cols=48 Identities=13% Similarity=0.139 Sum_probs=35.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|++++++++|++...+.|. ++.+++++.|.+.
T Consensus 75 ~~~~~~l~~~~~v~------~~Pt~~~~~~~~~~~~~~~G~----~~~~~l~~~l~~~ 122 (130)
T 2dml_A 75 ADKHQSLGGQYGVQ------GFPTIKIFGANKNKPEDYQGG----RTGEAIVDAALSA 122 (130)
T ss_dssp TTTCHHHHHHHTCC------SSSEEEEESSCTTSCEECCSC----CSHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCC------ccCEEEEEeCCCCeEEEeecC----CCHHHHHHHHHHH
Confidence 45678899999987 379999999999855555554 3467777766544
No 156
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.01 E-value=0.073 Score=34.11 Aligned_cols=46 Identities=17% Similarity=0.258 Sum_probs=34.9
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
.|...++++.|++. ..|+.+++ ++|+++..+.|. .+.+++.+.|++
T Consensus 64 ~~~~~~l~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 109 (111)
T 3uvt_A 64 CTAERNICSKYSVR------GYPTLLLF-RGGKKVSEHSGG----RDLDSLHRFVLS 109 (111)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEECSC----CSHHHHHHHHHH
T ss_pred ccccHhHHHhcCCC------cccEEEEE-eCCcEEEeccCC----cCHHHHHHHHHh
Confidence 45577889999987 37987777 899998877665 357888887764
No 157
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=95.94 E-value=0.077 Score=34.70 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=36.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.|++. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 70 ~~~~~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~G~~----~~~~l~~~l~~~l 117 (121)
T 2i1u_A 70 VDTNPETARNFQVV------SIPTLILF-KDGQPVKRIVGAK----GKAALLRELSDVV 117 (121)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHTCSCC
T ss_pred CCCCHHHHHhcCCC------cCCEEEEE-ECCEEEEEecCCC----CHHHHHHHHHHHH
Confidence 56678899999987 36998777 6999988877763 4677888777654
No 158
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.94 E-value=0.0015 Score=46.75 Aligned_cols=50 Identities=8% Similarity=0.111 Sum_probs=35.1
Q ss_pred HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCC------CCCHHHHHHHHHhccc
Q psy17183 69 ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV------GRNLKEILRQVEAFQL 122 (145)
Q Consensus 69 va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~------~~~~~ell~~i~~l~~ 122 (145)
++..|++. +...|+++++|++|+++....|.... ..+.+++++.|+.+..
T Consensus 93 ~~~~~~~~----~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 93 KDEDFSPD----GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp SCGGGCTT----CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred HHHHhccc----CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 56667663 22479999999999998877775321 2567888888776643
No 159
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=95.93 E-value=0.076 Score=34.82 Aligned_cols=46 Identities=15% Similarity=0.284 Sum_probs=33.7
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.||+. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 71 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 116 (117)
T 2xc2_A 71 VDKLEETARKYNIS------AMPTFIAI-KNGEKVGDVVGA-----SIAKVEDMIKKF 116 (117)
T ss_dssp TTTSHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CCccHHHHHHcCCC------ccceEEEE-eCCcEEEEEeCC-----CHHHHHHHHHHh
Confidence 45678899999987 36886655 899998877763 356777777653
No 160
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.92 E-value=0.041 Score=37.54 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=35.9
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEE-CCCCc--EEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYII-DKRGY--LRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfII-D~dG~--I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.||+. ..|+++++ |++|+ ++....|. +.+++.+.|+++.
T Consensus 78 ~~~~~~l~~~~~v~------~~Pt~~~~~~~~g~g~~~~~~~G~-----~~~~l~~~l~~~l 128 (133)
T 3cxg_A 78 VDIHPKLNDQHNIK------ALPTFEFYFNLNNEWVLVHTVEGA-----NQNDIEKAFQKYC 128 (133)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHHS
T ss_pred ccchHHHHHhcCCC------CCCEEEEEEecCCCeEEEEEEcCC-----CHHHHHHHHHHHH
Confidence 45678899999987 37999998 45665 88777764 3578888887664
No 161
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=95.85 E-value=0.098 Score=33.19 Aligned_cols=48 Identities=10% Similarity=0.158 Sum_probs=36.5
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 57 vd~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~~ 104 (105)
T 3m9j_A 57 VDVDDCQDVASESEVK------SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 104 (105)
T ss_dssp EETTTCHHHHHHTTCC------BSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred EEhhhhHHHHHHcCCC------cCcEEEEE-ECCeEEEEEeCC-----CHHHHHHHHHHh
Confidence 3356788899999987 47999999 889998877765 356777776653
No 162
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=95.83 E-value=0.097 Score=33.96 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=36.2
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=.|...++++.|++. ..|+.+++ ++|+++....|. +.+++.+.|+++.
T Consensus 65 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 65 VDVDELKDVAEAYNVE------AMPTFLFI-KDGEKVDSVVGG-----RKDDIHTKIVALM 113 (118)
T ss_dssp EETTTSHHHHHHTTCC------SBSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHHH
T ss_pred EEcccCHHHHHHcCCC------cCcEEEEE-eCCeEEEEecCC-----CHHHHHHHHHHHh
Confidence 3356778899999987 36987777 899998877663 3567777776653
No 163
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=95.82 E-value=0.13 Score=32.64 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=34.2
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 58 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~-----~~~~l~~~i~~~ 105 (106)
T 1xwb_A 58 VDVDECEDIAMEYNIS------SMPTFVFL-KNGVKVEEFAGA-----NAKRLEDVIKAN 105 (106)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHT
T ss_pred EeccchHHHHHHcCCC------cccEEEEE-cCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 3356678899999987 36885555 899998877762 356677777653
No 164
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=95.73 E-value=0.13 Score=32.42 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=34.1
Q ss_pred EecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 62 LSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 62 lsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
=.|...++++.|++. ..|+.+++ ++|+++....|. +.+++.+.|+++
T Consensus 57 ~~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~G~-----~~~~l~~~l~~~ 103 (104)
T 2vim_A 57 DVDQNEEAAAKYSVT------AMPTFVFI-KDGKEVDRFSGA-----NETKLRETITRH 103 (104)
T ss_dssp ETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred eccCCHHHHHHcCCc------cccEEEEE-eCCcEEEEEeCC-----CHHHHHHHHHhh
Confidence 345678899999987 36986666 699998887762 356777777653
No 165
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=95.68 E-value=0.095 Score=35.40 Aligned_cols=48 Identities=13% Similarity=0.214 Sum_probs=35.0
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.|++. ..|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 74 vd~d~~~~l~~~~~v~------~~Pt~~i~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 121 (125)
T 1r26_A 74 VDADNNSEIVSKCRVL------QLPTFIIA-RSGKMLGHVIGA-----NPGMLRQKLRDI 121 (125)
T ss_dssp EETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCC------cccEEEEE-eCCeEEEEEeCC-----CHHHHHHHHHHH
Confidence 3356678899999987 36986666 999998877762 356777777655
No 166
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=95.66 E-value=0.1 Score=33.55 Aligned_cols=46 Identities=2% Similarity=-0.029 Sum_probs=33.7
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.|++. ..|+.+++ ++|+++..+.|.. .+++.+.|+++
T Consensus 60 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~-----~~~l~~~l~~~ 105 (107)
T 1gh2_A 60 VHQCQGTAATNNIS------ATPTFQFF-RNKVRIDQYQGAD-----AVGLEEKIKQH 105 (107)
T ss_dssp TTTSHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESSC-----HHHHHHHHHHH
T ss_pred CccCHHHHHhcCCC------cccEEEEE-ECCeEEEEEeCCC-----HHHHHHHHHHh
Confidence 56678899999987 37988777 8999988777642 34566666543
No 167
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=95.51 E-value=0.09 Score=33.84 Aligned_cols=48 Identities=15% Similarity=0.244 Sum_probs=34.2
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+=.|...++++.||+. ..|+.+++ ++|+++..+.|. . .+++.+.|+++
T Consensus 63 v~~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~-~----~~~l~~~l~~~ 110 (113)
T 1ti3_A 63 VDVDELKAVAEEWNVE------AMPTFIFL-KDGKLVDKTVGA-D----KDGLPTLVAKH 110 (113)
T ss_dssp EETTTCHHHHHHHHCS------STTEEEEE-ETTEEEEEEECC-C----TTHHHHHHHHH
T ss_pred EEccccHHHHHhCCCC------cccEEEEE-eCCEEEEEEecC-C----HHHHHHHHHHh
Confidence 3356778999999987 36988877 799999888773 2 24555555543
No 168
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.37 E-value=0.048 Score=36.86 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=34.3
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
|.+.++++.|++. ..|+++|+ ++|+ +..+.|. ++.+++.+.|+++..
T Consensus 78 ~~~~~~~~~~~v~------~~Pt~~~~-~~G~-~~~~~g~----~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 78 TSASMLASKFDVS------GYPTIKIL-KKGQ-AVDYDGS----RTQEEIVAKVREVSQ 124 (140)
T ss_dssp TTCHHHHHHTTCC------SSSEEEEE-ETTE-EEECCSC----CCHHHHHHHHHHHHS
T ss_pred cccHHHHHHCCCC------ccCeEEEE-ECCc-EEEcCCC----CCHHHHHHHHHHhcC
Confidence 4567889999987 37999999 8898 4444443 457888888877653
No 169
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=95.36 E-value=0.039 Score=36.14 Aligned_cols=48 Identities=15% Similarity=0.219 Sum_probs=38.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.|++..
T Consensus 58 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~v~~~~G~~----~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 58 SEARPELMKELGFE------RVPTLVFI-RDGKVAKVFSGIM----NPRELQALYASIH 105 (110)
T ss_dssp GGGCHHHHHHTTCC------SSCEEEEE-ESSSEEEEEESCC----CHHHHHHHHHTC-
T ss_pred CcCCHHHHHHcCCc------ccCEEEEE-ECCEEEEEEcCCC----CHHHHHHHHHHHh
Confidence 46688899999987 37999999 9999998888763 4678888887765
No 170
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=95.36 E-value=0.038 Score=36.45 Aligned_cols=52 Identities=8% Similarity=-0.053 Sum_probs=35.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.|++. ..|+++++++.|.+ ....|....+++.+++.+.|+++.
T Consensus 61 ~~~~~~~~~~~~v~------~~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 61 CQAYPQTCQKAGIK------AYPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHH
T ss_pred CcCCHHHHHHcCCC------ccceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHH
Confidence 45677889999987 37999999888874 444453212245677777776654
No 171
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=95.30 E-value=0.023 Score=38.41 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=37.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.||+. ..|+++++ ++|+++....|.. +.+++.+.|+++
T Consensus 75 ~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 121 (123)
T 1oaz_A 75 IDQNPGTAPKYGIR------GIPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 121 (123)
T ss_dssp TTSCTTTGGGGTCC------BSSEEEEE-ESSSEEEEEESCC----CHHHHHHHHTTT
T ss_pred CCCCHHHHHHcCCC------ccCEEEEE-ECCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 45667788899987 37999999 9999998877763 467888887764
No 172
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.29 E-value=0.071 Score=39.07 Aligned_cols=48 Identities=13% Similarity=0.210 Sum_probs=36.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.|++. ..|+++++ ++|+++..+.|. ++.+++.+.|+++.
T Consensus 154 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~l 201 (210)
T 3apq_A 154 CGDDRMLCRMKGVN------SYPSLFIF-RSGMAAVKYNGD----RSKESLVAFAMQHV 201 (210)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-CTTSCCEECCSC----CCHHHHHHHHHHHH
T ss_pred CCccHHHHHHcCCC------cCCeEEEE-ECCCceeEecCC----CCHHHHHHHHHHhC
Confidence 45567788889887 37999999 999997776664 35678888877654
No 173
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.28 E-value=0.085 Score=36.57 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=40.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecC-----CCCC-CHHHHHHHHHhccccccCC---cccCCC
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDI-----QVGR-NLKEILRQVEAFQLVDSTD---TQCPVN 133 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~-----~~~~-~~~ell~~i~~l~~~~~~~---~~~p~~ 133 (145)
.|.+.++++.|++. ..|+++++ ++|+++....+.. .... +.+++.+.|+++......+ ..||.+
T Consensus 63 ~d~~~~~~~~~~i~------~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 135 (142)
T 1qgv_A 63 ITEVPDFNKMYELY------DPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKD 135 (142)
T ss_dssp TTTCCTTTTSSCSC------SSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHHTTTCSEEECCCC
T ss_pred cccCHHHHHHcCCC------CCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHHhcCCeEEeCCCC
Confidence 44556678888887 47999988 6898887655421 1112 3678888777765432222 447766
Q ss_pred C
Q psy17183 134 W 134 (145)
Q Consensus 134 w 134 (145)
.
T Consensus 136 ~ 136 (142)
T 1qgv_A 136 Y 136 (142)
T ss_dssp C
T ss_pred c
Confidence 4
No 174
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.21 E-value=0.13 Score=38.13 Aligned_cols=49 Identities=14% Similarity=0.249 Sum_probs=36.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
.|....+++.|++. ..|+.+++ ++|+++....|.. +.+++.+.|+.+..
T Consensus 70 ~d~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 70 IDQNPGTAPKYGIR------GIPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDANLA 118 (222)
T ss_dssp TTTCTTTGGGGTCC------SBSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHcCCC------cCCEEEEE-ECCeEEEEecccc----ChHHHHHHHHhhcc
Confidence 34455677889887 37988888 5999998887763 46788888877654
No 175
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.20 E-value=0.13 Score=43.73 Aligned_cols=46 Identities=7% Similarity=0.114 Sum_probs=33.6
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECC---CCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDK---RGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~---dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
..++++.||+. ..|+++++++ +|+++....+. ++.+++.+.|..+-
T Consensus 78 ~~~l~~~~~V~------~~PTl~~f~~g~~~G~~~~~~~g~----~~~~~L~~~l~~~l 126 (519)
T 3t58_A 78 NSAVCREFNIA------GFPTVRFFQAFTKNGSGATLPGAG----ANVQTLRMRLIDAL 126 (519)
T ss_dssp GHHHHHHTTCC------SBSEEEEECTTCCSCCCEEECCSS----CCHHHHHHHHHHHH
T ss_pred cHHHHHHcCCc------ccCEEEEEcCcccCCCceeEecCC----CCHHHHHHHHHHHH
Confidence 45678889987 3799999998 78766554443 56788888776654
No 176
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.06 E-value=0.076 Score=34.94 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=30.4
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHH
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVE 118 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~ 118 (145)
.++++.||+. ..|+++++ ++|+++....|. .+.+++.+.|+
T Consensus 77 ~~~~~~~~i~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~ 117 (118)
T 1zma_A 77 QAFRSRYGIP------TVPGFVHI-TDGQINVRCDSS----MSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHTCC------SSCEEEEE-ETTEEEEECCTT----CCHHHHHHHHT
T ss_pred HHHHHHcCCC------CCCeEEEE-ECCEEEEEecCC----CCHHHHHHHhh
Confidence 4678899987 37999999 599988766654 34677777664
No 177
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=94.97 E-value=0.057 Score=35.74 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=36.2
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
+=.|...++++.||+. ..|+.+++ ++|+++..+.|. +.+++.+.|++
T Consensus 57 vd~d~~~~l~~~~~V~------~~PT~~~~-~~G~~v~~~~G~-----~~~~l~~~i~k 103 (105)
T 3zzx_A 57 VDVDECEDIAQDNQIA------CMPTFLFM-KNGQKLDSLSGA-----NYDKLLELVEK 103 (105)
T ss_dssp EETTTCHHHHHHTTCC------BSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHH
T ss_pred EecccCHHHHHHcCCC------eecEEEEE-ECCEEEEEEeCc-----CHHHHHHHHHh
Confidence 3357788999999998 47976666 899999888763 46788887764
No 178
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=94.88 E-value=0.11 Score=39.53 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=35.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.||+. ..|+++++ ++|+++..+.|.. +.+.+.+.|+...
T Consensus 66 ~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~~----~~~~l~~~l~~~l 113 (287)
T 3qou_A 66 CDAEQMIAAQFGLR------AIPTVYLF-QNGQPVDGFQGPQ----PEEAIRALLDXVL 113 (287)
T ss_dssp TTTCHHHHHTTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHS
T ss_pred CccCHHHHHHcCCC------CCCeEEEE-ECCEEEEEeeCCC----CHHHHHHHHHHHc
Confidence 45567888889987 37999999 7999998887763 3556666665543
No 179
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.32 E-value=0.073 Score=37.70 Aligned_cols=50 Identities=8% Similarity=0.118 Sum_probs=39.5
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=.|.+.+++..||+. ++|+.+++ ++|+++...+|..+ -+++.+.|+++.
T Consensus 73 VdvDe~~~la~~ygV~------siPTlilF-kdG~~v~~~vG~~~----k~~l~~~l~~~l 122 (137)
T 2qsi_A 73 VAAEAERGLMARFGVA------VCPSLAVV-QPERTLGVIAKIQD----WSSYLAQIGAML 122 (137)
T ss_dssp ECGGGHHHHHHHHTCC------SSSEEEEE-ECCEEEEEEESCCC----HHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCc------cCCEEEEE-ECCEEEEEEeCCCC----HHHHHHHHHHHh
Confidence 3367788999999998 58999999 99999999998754 456666666544
No 180
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=94.18 E-value=0.28 Score=32.60 Aligned_cols=48 Identities=6% Similarity=-0.107 Sum_probs=34.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEE-EEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR-SMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~-~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|.+.++++.|++. ..|+.+++++.+++. ..+.| .++.+++.+.|+++
T Consensus 78 ~~~~~~l~~~~~v~------~~Pt~~~~~~g~~~~~~~~~G----~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 78 GEKYPDVIERMRVS------GFPTMRYYTRIDKQEPFEYSG----QRYLSLVDSFVFQN 126 (127)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEECSSCSSSCEECCS----CCCHHHHHHHHHHH
T ss_pred ccccHhHHHhcCCc------cCCEEEEEeCCCCCCceEecC----CccHHHHHHHHHhc
Confidence 45677889999988 379999998777653 22333 35788888888754
No 181
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.18 E-value=0.061 Score=38.26 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=39.3
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=.|.+.+++..||+. ++|+.+++ ++|+++...+|..+ -+++.+.|+++.
T Consensus 75 VdvDe~~~lA~~ygV~------sIPTlilF-k~G~~v~~~~G~~~----k~~l~~~i~~~l 124 (140)
T 2qgv_A 75 ADLEQSEAIGDRFGAF------RFPATLVF-TGGNYRGVLNGIHP----WAELINLMRGLV 124 (140)
T ss_dssp CCHHHHHHHHHHHTCC------SSSEEEEE-ETTEEEEEEESCCC----HHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCc------cCCEEEEE-ECCEEEEEEecCCC----HHHHHHHHHHHh
Confidence 3367789999999998 58999888 99999999988743 456666666543
No 182
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.05 E-value=0.23 Score=33.57 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=24.3
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCC
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQ 105 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~ 105 (145)
...++++.|++.....-...|+++++ ++|+++..+.|..+
T Consensus 69 ~~~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 69 RYTDVSTRYKVSTSPLTKQLPTLILF-QGGKEAMRRPQIDK 108 (137)
T ss_dssp TCHHHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEEESCBCS
T ss_pred cCHHHHHHccCcccCCcCCCCEEEEE-ECCEEEEEecCcCc
Confidence 34445555555310000136999988 89999988887643
No 183
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=93.99 E-value=0.16 Score=36.99 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=34.1
Q ss_pred EEecCchHHHHHh--------CCCccCCCCcceEEEEECCCCcEEEEEeecCCC----CCCHHHHHHHHHh
Q psy17183 61 LLSDSTHAISKTY--------GCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV----GRNLKEILRQVEA 119 (145)
Q Consensus 61 llsD~~~~va~~y--------g~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~----~~~~~ell~~i~~ 119 (145)
+=.|...++++.| |+. ..|+++++|++|++++...+..+. ...+.++|+.+..
T Consensus 80 VD~de~~~l~~~y~~~~q~~~gv~------g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~ 144 (173)
T 3ira_A 80 VDREERPDIDNIYMTVCQIILGRG------GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKE 144 (173)
T ss_dssp EETTTCHHHHHHHHHHHHHHHSCC------CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHH
T ss_pred eCCcccCcHHHHHHHHHHHHcCCC------CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHH
Confidence 3334456677777 665 379999999999999874332121 1246777766644
No 184
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=93.66 E-value=0.43 Score=34.72 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=34.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.||+. ..|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 178 ~~~~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 224 (226)
T 1a8l_A 178 AIEYPEWADQYNVM------AVPKIVIQ-VNGEDRVEFEGAY----PEKMFLEKLLSA 224 (226)
T ss_dssp GGGCHHHHHHTTCC------SSCEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred cccCHHHHHhCCCc------ccCeEEEE-eCCceeEEEcCCC----CHHHHHHHHHHh
Confidence 45677889999987 36996666 7999988777763 456777777654
No 185
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.28 E-value=0.55 Score=31.85 Aligned_cols=45 Identities=16% Similarity=0.278 Sum_probs=32.1
Q ss_pred HHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCC---CCHHHHHHHHHhccc
Q psy17183 71 KTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVG---RNLKEILRQVEAFQL 122 (145)
Q Consensus 71 ~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~---~~~~ell~~i~~l~~ 122 (145)
+.|++. ..|+.++++ +|+++....|....+ ...+++.+.|++...
T Consensus 74 ~~~~i~------~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~~ 121 (135)
T 2dbc_A 74 EHYHDN------CLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEVGA 121 (135)
T ss_dssp SSCCSS------CCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHHTS
T ss_pred ccCCCC------CCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcCC
Confidence 567766 479998885 999999988875332 256777777776543
No 186
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=93.26 E-value=0.32 Score=34.96 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=15.9
Q ss_pred cceEEEEECCCCcEEEEE
Q psy17183 83 SLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 83 ~~p~tfIID~dG~I~~~~ 100 (145)
..|+++++|++|+++..+
T Consensus 110 ~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 110 AIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp CSSEEEEECTTCCEEEEE
T ss_pred CcCeEEEECCCCCEEEEE
Confidence 579999999999998766
No 187
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=92.20 E-value=0.017 Score=38.72 Aligned_cols=47 Identities=9% Similarity=0.135 Sum_probs=33.3
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECC-CCcE--EEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDK-RGYL--RSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~-dG~I--~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
...++++.|++. ..|+++|+|+ +|++ +....|..+ .+++.+.|+++.
T Consensus 66 ~~~~~~~~~~v~------~~Pt~~~~d~~~G~~~~~~~~~G~~~----~~~l~~~l~~~~ 115 (130)
T 2lst_A 66 EGQELARRYRVP------GTPTFVFLVPKAGAWEEVGRLFGSRP----RAEFLKELRQVC 115 (130)
Confidence 456788889887 3799999996 5998 777776543 345666655543
No 188
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=93.02 E-value=0.44 Score=34.80 Aligned_cols=47 Identities=15% Similarity=0.240 Sum_probs=33.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.||+. ..|++++++ +|+++ .+.| .++.+++.+.++...
T Consensus 75 ~~~~~~l~~~~~v~------~~Pt~~~~~-~g~~~-~~~g----~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 75 ATSASVLASRFDVS------GYPTIKILK-KGQAV-DYEG----SRTQEEIVAKVREVS 121 (241)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEEE-TTEEE-ECCS----CSCHHHHHHHHHHHH
T ss_pred ccCCHHHHHhcCCC------cCCEEEEEc-CCCcc-cccC----cccHHHHHHHHhhcc
Confidence 45677899999988 379999995 67655 2333 356788888777654
No 189
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=92.56 E-value=0.24 Score=32.96 Aligned_cols=76 Identities=11% Similarity=0.014 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|....|.|.+++ +++.. ++.++.|+.++.. .|. |....+++.|++.
T Consensus 46 C~~~~p~l~~~~--~~~~~-~~~~~~vd~~~~~---~~~-----------------------d~~~~~~~~~~i~----- 91 (123)
T 1wou_A 46 CVQAEPVVREGL--KHISE-GCVFIYCQVGEKP---YWK-----------------------DPNNDFRKNLKVT----- 91 (123)
T ss_dssp HHHHHHHHHHHG--GGCCT-TEEEEEEECCCHH---HHH-----------------------CTTCHHHHHHCCC-----
T ss_pred HHHhhHHHHHHH--HHcCC-CcEEEEEECCCch---hhh-----------------------chhHHHHHHCCCC-----
Confidence 777778887776 35543 6778888776421 121 3456688889987
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHH
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVE 118 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~ 118 (145)
..|+++++++.+++ .+.. +.+.+++.+.|+
T Consensus 92 -~~Pt~~~~~~~~~~----~g~~--~~~~~~l~~~i~ 121 (123)
T 1wou_A 92 -AVPTLLKYGTPQKL----VESE--CLQANLVEMLFS 121 (123)
T ss_dssp -SSSEEEETTSSCEE----EGGG--GGCHHHHHHHHH
T ss_pred -eeCEEEEEcCCceE----eccc--cCCHHHHHHHHh
Confidence 47999999874433 2332 234566666654
No 190
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=91.80 E-value=0.27 Score=29.80 Aligned_cols=67 Identities=9% Similarity=0.120 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAG 81 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g 81 (145)
|....+.|.++. +++. .++.++.|+.|. +.++++.||+.
T Consensus 17 C~~~~~~l~~~~--~~~~-~~~~~~~vd~~~---------------------------------~~~~~~~~~v~----- 55 (85)
T 1fo5_A 17 CPAAKRVVEEVA--NEMP-DAVEVEYINVME---------------------------------NPQKAMEYGIM----- 55 (85)
T ss_dssp CCTHHHHHHHHH--HHCS-SSEEEEEEESSS---------------------------------SCCTTTSTTTC-----
T ss_pred hHHHHHHHHHHH--HHcC-CceEEEEEECCC---------------------------------CHHHHHHCCCc-----
Confidence 666667776665 3443 356666666642 22335567776
Q ss_pred CcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 82 HSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 82 ~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
..|++++ +|++ .+.|. .+.+++.+.|++
T Consensus 56 -~~Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~ 83 (85)
T 1fo5_A 56 -AVPTIVI---NGDV--EFIGA----PTKEALVEAIKK 83 (85)
T ss_dssp -CSSEEEE---TTEE--ECCSS----SSSHHHHHHHHH
T ss_pred -ccCEEEE---CCEE--eeecC----CCHHHHHHHHHH
Confidence 3698887 8987 44443 235677777654
No 191
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=90.80 E-value=0.035 Score=35.14 Aligned_cols=47 Identities=15% Similarity=0.233 Sum_probs=33.6
Q ss_pred EecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 62 LSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 62 lsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
=.|.+.++++.||+. ..|+.+++ ++|+++..+.|..+ .+++.+.|++
T Consensus 58 ~~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~~~----~~~l~~~l~~ 104 (106)
T 2yj7_A 58 NVDENPNTAAQYGIR------SIPTLLLF-KNGQVVDRLVGAQP----KEALKERIDK 104 (106)
Confidence 356677888899887 37999999 89999887776532 3455555543
No 192
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=91.40 E-value=1.1 Score=34.81 Aligned_cols=50 Identities=10% Similarity=0.052 Sum_probs=31.2
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEee-------------cCCCCCCHHHHHHHHHhcc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVS-------------DIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~-------------~~~~~~~~~ell~~i~~l~ 121 (145)
...++++.||+. ..|+.++++. |+++....| .....++.+.+.+.+....
T Consensus 79 ~~~~l~~~~~I~------~~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 79 KNKALCAKYDVN------GFPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp TTHHHHHHTTCC------BSSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred cCHHHHHhCCCC------ccceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 457889999987 3799999965 553222211 1123467889988886654
No 193
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=91.32 E-value=0.45 Score=30.90 Aligned_cols=35 Identities=3% Similarity=0.049 Sum_probs=24.7
Q ss_pred cceEEEEECCCCcE-EEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 83 SLRAYYIIDKRGYL-RSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 83 ~~p~tfIID~dG~I-~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
..|+++++++.|++ ...+.|. ++.+++.+.|+++.
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~~G~----~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTYSGS----RTVEDLIKFIAENG 116 (121)
T ss_dssp SSSEEEEECSSCTTSCCCCCCC----SCHHHHHHHHHHTS
T ss_pred cCCeEEEEeCcCCCCceEecCC----CCHHHHHHHHHhcc
Confidence 47999999988884 3344443 45788888887653
No 194
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=91.17 E-value=0.92 Score=33.68 Aligned_cols=50 Identities=4% Similarity=0.066 Sum_probs=30.7
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEE-EEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR-SMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~-~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|.+.++++.|++. ..|+.+++++.+++- ...+ ...|++.+++.+.|..+-
T Consensus 76 ~~~~~l~~~~~v~------~~Pt~~~~~~g~~~~~g~~~--~~~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 76 ETNSAVCRDFNIP------GFPTVRFFXAFTXNGSGAVF--PVAGADVQTLRERLIDAL 126 (244)
T ss_dssp TTTHHHHHHTTCC------SSSEEEEECTTCCSSSCEEC--CCTTCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHcCCC------ccCEEEEEeCCCcCCCCeeE--ecCCCCHHHHHHHHHHHH
Confidence 3456778889987 379999998733321 0111 122356788887776654
No 195
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=90.81 E-value=0.061 Score=38.34 Aligned_cols=55 Identities=11% Similarity=-0.008 Sum_probs=35.3
Q ss_pred cEEec-CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCC------CCCHHHHHHHHHhc
Q psy17183 60 PLLSD-STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV------GRNLKEILRQVEAF 120 (145)
Q Consensus 60 pllsD-~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~------~~~~~ell~~i~~l 120 (145)
.+-.| .....+..|++. ..|+++++|++|+++...+|.... ..+++++++.+++.
T Consensus 82 ~V~vD~e~~~~~~~~~v~------~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 82 MLNLMHETTDKNLSPDGQ------YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp EEEESSCCSCGGGCTTCC------CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred EEEecCCchhhHhhcCCC------CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 34444 234456667664 479999999999999888876111 12456666655543
No 196
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=90.68 E-value=0.15 Score=32.85 Aligned_cols=48 Identities=10% Similarity=0.219 Sum_probs=35.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEE--EEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR--SMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~--~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.|++. ..|+.+++ ++|+++ ..+.|. ++.+++.+.|+++.
T Consensus 67 ~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~~~g~----~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 67 ATEESDLAQQYGVR------GYPTIKFF-RNGDTASPKEYTAG----READDIVNWLKKRT 116 (120)
T ss_dssp TTTCCSSHHHHTCC------SSSEEEEE-ESSCSSSCEECCCC----SSHHHHHHHHHTTS
T ss_pred CCCCHHHHHHCCCC------cccEEEEE-eCCCcCCcccccCc----cCHHHHHHHHHhcc
Confidence 34567889999987 37999999 788765 554443 45788888887654
No 197
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.19 E-value=1.1 Score=35.12 Aligned_cols=47 Identities=9% Similarity=0.069 Sum_probs=34.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+|...++++.||+. ..|+.+++ ++|++ ..+.|. ++.+++.+.++...
T Consensus 75 ~~~~~~l~~~~~v~------~~Pt~~~~-~~g~~-~~~~G~----~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 75 AKKEAKLAKKLGFD------EEGSLYVL-KGDRT-IEFDGE----FAADVLVEFLLDLI 121 (350)
T ss_dssp TTTTHHHHHHHTCC------STTEEEEE-ETTEE-EEECSC----CCHHHHHHHHHTTS
T ss_pred CCCCHHHHHhcCCC------ccceEEEE-ECCcE-EEecCC----CCHHHHHHHHHHhc
Confidence 56678889999987 37999999 78884 344443 56788888876543
No 198
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=90.16 E-value=0.62 Score=33.09 Aligned_cols=56 Identities=16% Similarity=0.086 Sum_probs=37.9
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCC-CcEEEEEeecCCCCCCHHHHHHHHHhcccccc--CCcccCC
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKR-GYLRSMNVSDIQVGRNLKEILRQVEAFQLVDS--TDTQCPV 132 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~d-G~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~--~~~~~p~ 132 (145)
...+++.|++. ..|++++||++ |+.+... + +.+.+++++.|+.+..... .++.||.
T Consensus 90 ~~~l~~~y~v~------~~P~~~fld~~~G~~l~~~-~----g~~~~~fl~~L~~~l~~~~~~~~~~~~~ 148 (153)
T 2dlx_A 90 GQRYIQFYKLG------DFPYVSILDPRTGQKLVEW-H----QLDVSSFLDQVTGFLGEHGQLDGLSSSS 148 (153)
T ss_dssp HHHHHHHHTCC------SSSEEEEECTTTCCCCEEE-S----SCCHHHHHHHHHHHHHHTCSCSSCCCCC
T ss_pred HHHHHHHcCCC------CCCEEEEEeCCCCcEeeec-C----CCCHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 34678899987 36999999999 8666553 2 2467888888877653222 2355663
No 199
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=89.96 E-value=0.37 Score=29.17 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=25.7
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.++++.||+. ..|++++ +|++ ...|.. +.+++.+.|+++
T Consensus 45 ~~~~~~~~v~------~~Pt~~~---~G~~--~~~G~~----~~~~l~~~l~~~ 83 (85)
T 1nho_A 45 REKAIEYGLM------AVPAIAI---NGVV--RFVGAP----SREELFEAINDE 83 (85)
T ss_dssp GGGGGGTCSS------CSSEEEE---TTTE--EEECSS----CCHHHHHHHHHH
T ss_pred HHHHHhCCce------eeCEEEE---CCEE--EEccCC----CHHHHHHHHHHH
Confidence 3456778877 3698888 8988 455542 346777776653
No 200
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.39 E-value=0.39 Score=31.83 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=27.1
Q ss_pred HHHhCCCccCCCCcceEEEEECCCCcEEEE-EeecCCCCCCHHHHHHHHHhccc
Q psy17183 70 SKTYGCYLSSAGHSLRAYYIIDKRGYLRSM-NVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 70 a~~yg~~~~~~g~~~p~tfIID~dG~I~~~-~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
++.|++. ..|+++++++.|++... +.+. .++.+++.+.|+++..
T Consensus 74 ~~~~~v~------~~Pt~~~~~~g~~~~~~~~~gg---~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 74 NDQYKVE------GFPTIYFAPSGDKKNPIKFEGG---NRDLEHLSKFIDEHAT 118 (133)
T ss_dssp CSSCCCS------SSSEEEEECTTCTTSCEECCSS---CCSTTHHHHHHHHHSS
T ss_pred HhhcCCC------cCCEEEEEeCCCcccceEecCC---CcCHHHHHHHHHHhcc
Confidence 4457776 37999999888765432 2211 1345677777766543
No 201
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=88.89 E-value=2.4 Score=31.34 Aligned_cols=54 Identities=9% Similarity=0.178 Sum_probs=39.6
Q ss_pred CccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 58 IVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 58 ~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.++.+.|.+.++++.||+. ..|+.++++++|++........ ..+.+-..|+.|.
T Consensus 186 ~v~~~~~~~~~l~~~f~v~------~~Pslvl~~~~g~~~~~~~~~~----~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 186 AVRRVLNTEANVVRKFGVT------DFPSCYLLFRNGSVSRVPVLME----SRSFYTAYLQRLS 239 (244)
T ss_dssp EEEEEETTCHHHHHHHTCC------CSSEEEEEETTSCEEECCCSSS----SHHHHHHHHHTC-
T ss_pred EEEEEeCchHHHHHHcCCC------CCCeEEEEeCCCCeEeeccccc----cHHHHHHHHHhCC
Confidence 6778888889999999998 3699999999999987764331 2344445555554
No 202
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=88.84 E-value=1.7 Score=31.52 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=34.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.||+. ..|+.++++ +|+++. +.| .++.+++++.|++..
T Consensus 190 ~~~~~~l~~~~~v~------~~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 190 ATAETDLAKRFDVS------GYPTLKIFR-KGRPYD-YNG----PREKYGIVDYMIEQS 236 (241)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEEE-TTEEEE-CCS----CCSHHHHHHHHHHHT
T ss_pred CCCCHHHHHHcCCc------ccCEEEEEE-CCeEEE-ecC----CCCHHHHHHHHHhhh
Confidence 46678899999998 379888885 677653 333 356888888887653
No 203
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=88.23 E-value=3.8 Score=30.62 Aligned_cols=43 Identities=26% Similarity=0.321 Sum_probs=31.1
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
|...++++.||+. +.|++|| +|+++ +.|. ++.+++++.|+...
T Consensus 183 ~~~~~~~~~~~V~------~vPt~~i---~G~~~--~~G~----~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 183 YENPDIADKYGVM------SVPSIAI---NGYLV--FVGV----PYEEDFLDYVKSAA 225 (243)
T ss_dssp TTCHHHHHHTTCC------SSSEEEE---TTEEE--EESC----CCHHHHHHHHHHHH
T ss_pred ccCHHHHHHcCCe------eeCeEEE---CCEEE--EeCC----CCHHHHHHHHHHHh
Confidence 3466788999987 4799888 78875 4454 45778888777654
No 204
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=87.62 E-value=2 Score=35.34 Aligned_cols=48 Identities=8% Similarity=0.023 Sum_probs=33.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcE--EEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYL--RSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I--~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+|...++++.||+. ..|+.+++ ++|++ ...+.|. ++.+++.+.|....
T Consensus 72 ~~~~~~l~~~~~v~------~~Pt~~~~-~~g~~~~~~~~~G~----~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 72 CTENQDLCMEHNIP------GFPSLKIF-KNSDVNNSIDYEGP----RTAEAIVQFMIKQS 121 (504)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-ETTCTTCEEECCSC----CSHHHHHHHHHHHT
T ss_pred CCCCHHHHHhcCCC------cCCEEEEE-eCCccccceeecCC----CCHHHHHHHHHHhc
Confidence 44567788899987 36999998 45765 4444443 56788888776544
No 205
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=86.83 E-value=3.2 Score=33.01 Aligned_cols=48 Identities=13% Similarity=0.245 Sum_probs=34.0
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEE-EeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSM-NVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~-~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+|...++++.||+. ..|+.+++ ++|+++.. +.|. ++.+++.+.|....
T Consensus 68 ~~~~~~l~~~~~v~------~~Pt~~~f-~~G~~~~~~~~G~----~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 68 CDQHSDIAQRYRIS------KYPTLKLF-RNGMMMKREYRGQ----RSVKALADYIRQQK 116 (382)
T ss_dssp TTTCHHHHHHTTCC------EESEEEEE-ETTEEEEEECCSC----CSHHHHHHHHHHHH
T ss_pred CCccHHHHHhcCCC------cCCEEEEE-eCCcEeeeeecCc----chHHHHHHHHHHhc
Confidence 45567889999987 37988877 78988753 3343 56788888776543
No 206
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=86.48 E-value=0.99 Score=39.35 Aligned_cols=52 Identities=8% Similarity=-0.023 Sum_probs=37.9
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|....+++.||+. ..|+++++ ++|+++....|.....++.+++.+.|+++.
T Consensus 715 ~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l 766 (780)
T 3apo_A 715 CQAYPQTCQKAGIK------AYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKL 766 (780)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHT
T ss_pred CCCCHHHHHhcCCC------cCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHH
Confidence 45577889999987 37999999 889887766664211246788888887665
No 207
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=86.34 E-value=0.56 Score=32.04 Aligned_cols=43 Identities=0% Similarity=-0.164 Sum_probs=32.2
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
..++..|++. ..|+.++++ +|+.+....|..+ .+++++.|+.+
T Consensus 66 ~~la~~~~V~------g~PT~i~f~-~G~ev~Ri~G~~~----~~~f~~~L~~~ 108 (116)
T 3dml_A 66 PGLELARPVT------FTPTFVLMA-GDVESGRLEGYPG----EDFFWPMLARL 108 (116)
T ss_dssp TTCBCSSCCC------SSSEEEEEE-TTEEEEEEECCCC----HHHHHHHHHHH
T ss_pred hhHHHHCCCC------CCCEEEEEE-CCEEEeeecCCCC----HHHHHHHHHHH
Confidence 3567777766 479999998 9999999988754 46666666554
No 208
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=85.96 E-value=3.7 Score=35.73 Aligned_cols=45 Identities=9% Similarity=0.202 Sum_probs=30.6
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
....+++.||+. ..|+++++ ++|++ +.+.|. ++.+++.+.++.+.
T Consensus 497 ~~~~~~~~~~v~------~~Pt~~~~-~~g~~-~~~~g~----~~~~~l~~fi~~~~ 541 (780)
T 3apo_A 497 IHEGLCNMYNIQ------AYPTTVVF-NQSSI-HEYEGH----HSAEQILEFIEDLR 541 (780)
T ss_dssp TCHHHHHHTTCC------SSSEEEEE-ETTEE-EEECSC----SCHHHHHHHHHHHH
T ss_pred CCHHHHHHcCCC------cCCeEEEE-cCCce-eeecCc----ccHHHHHHHHHhhc
Confidence 345577788887 37999999 56876 554443 45677777776654
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=85.77 E-value=1.6 Score=35.56 Aligned_cols=44 Identities=11% Similarity=0.184 Sum_probs=30.4
Q ss_pred HHHHhCCCccCCCCcceEEEEECCCCcE-EEEEeecCCCCCCHHHHHHHHHhccc
Q psy17183 69 ISKTYGCYLSSAGHSLRAYYIIDKRGYL-RSMNVSDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 69 va~~yg~~~~~~g~~~p~tfIID~dG~I-~~~~~~~~~~~~~~~ell~~i~~l~~ 122 (145)
+++.|++. ..|+.+++++.|++ ...+.|. ++.+++++.|++...
T Consensus 417 ~~~~~~v~------~~Pt~~~~~~~~~~~~~~~~G~----~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 417 VPSPYEVR------GFPTIYFSPANKKLNPKKYEGG----RELSDFISYLQREAT 461 (481)
T ss_dssp CCTTCCCC------SSSEEEEECTTCTTSCEECCSC----CSHHHHHHHHHHHCS
T ss_pred hHhhCCCc------ccCEEEEEeCCCeEeeeEeCCC----CCHHHHHHHHHHhcC
Confidence 44557766 36999999888874 3333443 568889988877654
No 210
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=84.99 E-value=0.96 Score=34.02 Aligned_cols=49 Identities=14% Similarity=0.078 Sum_probs=33.2
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcccc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~ 123 (145)
|.+.++++.||+. ..|+.|+.|.+|++ ....|.. +.+++.+.|++...+
T Consensus 186 ~~~~~l~~~~gv~------gtPt~vi~~~~G~~-~~~~G~~----~~~~L~~~l~~~~~~ 234 (241)
T 1v58_A 186 SDNEKLMDDLGAN------VTPAIYYMSKENTL-QQAVGLP----DQKTLNIIMGNKLQH 234 (241)
T ss_dssp HHHHHHHHHHTCC------SSCEEEEEETTTEE-EEEESSC----CHHHHHHHTTC----
T ss_pred HHHHHHHHHcCCC------CCCEEEEECCCCCE-EEecCCC----CHHHHHHHHHHHHHh
Confidence 4466778899987 36999999989976 3445543 467888888776644
No 211
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=84.51 E-value=1.8 Score=31.76 Aligned_cols=47 Identities=17% Similarity=0.091 Sum_probs=29.9
Q ss_pred cEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 60 PLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 60 pllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+...|.+.++++.||+. ..|++|+.| |+. ..|.. +.+++.+.|++..
T Consensus 164 ~~~v~~~~~l~~~~gV~------gtPt~v~~d--G~~---~~G~~----~~~~l~~~l~~~~ 210 (216)
T 1eej_A 164 DVDIADHYALGVQLGVS------GTPAVVLSN--GTL---VPGYQ----PPKEMKEFLDEHQ 210 (216)
T ss_dssp SCCHHHHHHHHHHHTCC------SSSEEECTT--SCE---EESCC----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC------ccCEEEEcC--CeE---ecCCC----CHHHHHHHHHHhh
Confidence 34456678899999988 369886544 542 34442 3567777666543
No 212
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=84.35 E-value=4.5 Score=23.68 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=24.8
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
+.++++.||+. ..|++++ +|+++.. |.. .+.+++.+.|
T Consensus 39 ~~~~~~~~~v~------~~Pt~~~---~G~~~~~--G~~---~~~~~l~~~l 76 (77)
T 1ilo_A 39 EMDQILEAGLT------ALPGLAV---DGELKIM--GRV---ASKEEIKKIL 76 (77)
T ss_dssp SHHHHHHHTCS------SSSCEEE---TTEEEEC--SSC---CCHHHHHHHC
T ss_pred CHHHHHHCCCC------cCCEEEE---CCEEEEc--CCC---CCHHHHHHHh
Confidence 45667778887 3688877 8988755 432 1466666654
No 213
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=84.33 E-value=1.8 Score=30.76 Aligned_cols=41 Identities=10% Similarity=0.243 Sum_probs=23.3
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.+.+.++.+|+. | .|+ |||| |+.+ ..|. .+.+++.+.|+.+
T Consensus 138 ~~~~~a~~~gv~----g--tPt-~vin--g~~~--~~g~----~~~~~l~~~i~~~ 178 (195)
T 2znm_A 138 KMQKLTEQYRID----S--TPT-VIVG--GKYR--VIFN----NGFDGGVHTIKEL 178 (195)
T ss_dssp HHHHHHHHTTCC----S--SSE-EEET--TTEE--ECCC----SHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC----C--CCe-EEEC--CEEE--EcCC----CCHHHHHHHHHHH
Confidence 355667777776 3 688 7775 5532 1222 2356666665554
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=84.29 E-value=3.6 Score=33.51 Aligned_cols=50 Identities=12% Similarity=0.156 Sum_probs=36.7
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+=+|...++++.||+. ..|+.+++ ++|++...+.|. ++.+++.+.+....
T Consensus 59 vd~~~~~~l~~~~~v~------~~Ptl~~~-~~g~~~~~~~G~----~~~~~l~~~~~~~~ 108 (481)
T 3f8u_A 59 VDCTANTNTCNKYGVS------GYPTLKIF-RDGEEAGAYDGP----RTADGIVSHLKKQA 108 (481)
T ss_dssp EETTTCHHHHHHTTCC------EESEEEEE-ETTEEEEECCSC----SSHHHHHHHHHHHT
T ss_pred EECCCCHHHHHhcCCC------CCCEEEEE-eCCceeeeecCc----cCHHHHHHHHHhhc
Confidence 4466788999999998 37987777 889776665554 56788888776554
No 215
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=84.00 E-value=3.3 Score=28.75 Aligned_cols=41 Identities=10% Similarity=0.173 Sum_probs=24.7
Q ss_pred cCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 64 DSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 64 D~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+.+.+.++.+|+. | .|+.|| +|+ ...|. .+.+++.+.|++.
T Consensus 131 ~~~~~~a~~~gv~----g--tPt~~i---~g~---~~~G~----~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 131 AQSMALAQKLGFN----G--TPSFVV---EDA---LVPGF----VEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHHHTCC----S--SSEEEE---TTE---EECSC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc----c--CCEEEE---CCE---EeeCC----CCHHHHHHHHHHH
Confidence 4456677888877 3 686655 454 23343 2467777777654
No 216
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=83.68 E-value=2 Score=32.75 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=34.4
Q ss_pred HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCC-C--CCHHHHHHHHHhccccc
Q psy17183 69 ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV-G--RNLKEILRQVEAFQLVD 124 (145)
Q Consensus 69 va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~-~--~~~~ell~~i~~l~~~~ 124 (145)
++..|++. ..|+++|+ ++|+++..++|.... + ...+++...|.......
T Consensus 177 l~~~~~I~------~~PTll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l~ 228 (245)
T 1a0r_P 177 AGDRFSSD------VLPTLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNEYGLLP 228 (245)
T ss_dssp CTTSSCTT------TCSEEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTCSC
T ss_pred HHHHCCCC------CCCEEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHHcCCCC
Confidence 45567766 37998888 599999998887532 2 35677888887765543
No 217
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=82.70 E-value=0.26 Score=32.48 Aligned_cols=47 Identities=13% Similarity=0.245 Sum_probs=31.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...++++.|++. ..|+.+++ ++|+++....|. +.+++.+.|+++.
T Consensus 75 ~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 75 VDELKEVAEKYNVE------AMPTFLFI-KDGAEADKVVGA-----RKDDLQNTIVKHV 121 (130)
T ss_dssp TTTSGGGHHHHTCC------SSCCCCBC-TTTTCCBCCCTT-----CTTTHHHHHHHHT
T ss_pred ccchHHHHHHcCCC------ccceEEEE-eCCeEEEEEeCC-----CHHHHHHHHHHHH
Confidence 46678899999987 36876555 899987666552 2345555555444
No 218
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=82.50 E-value=5.1 Score=33.81 Aligned_cols=57 Identities=9% Similarity=0.121 Sum_probs=41.7
Q ss_pred CccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 58 IVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 58 ~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
.++.+.|.+.++++.||+.. .|+.++++++|++....+... ..+.+-..|++|..+.
T Consensus 186 ~v~~v~~~~~~l~~kfgV~~------~Pslvl~~~nGk~~~~~v~~~----~r~~~~~~l~~l~~~~ 242 (519)
T 3t58_A 186 AVRRVLNTESDLVNKFGVTD------FPSCYLLLRNGSVSRVPVLVE----SRSFYTSYLRGLPGLT 242 (519)
T ss_dssp EEEEEETTCHHHHHHHTCCC------SSEEEEEETTSCEEECCCSSC----SHHHHHHHHTTSTTCC
T ss_pred eEEEecCchHHHHHHcCCCC------CCeEEEEeCCCceeecccccc----cHHHHHHHHHHccCCC
Confidence 68888899999999999983 699999999999876543321 2244446666665543
No 219
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=80.25 E-value=1 Score=32.62 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=41.7
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEE---------EeecCCCCCCHHHHHHHHHhccccccCC---c
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSM---------NVSDIQVGRNLKEILRQVEAFQLVDSTD---T 128 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~---------~~~~~~~~~~~~ell~~i~~l~~~~~~~---~ 128 (145)
+=.|...+++..|++. +.|+.+++ ++|+.+.+ .+|.. .+-+++.+.|+++-.....+ -
T Consensus 79 VDVDe~~e~a~~y~V~------siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~---~~k~~l~~~ie~~~r~a~~g~~~v 148 (160)
T 2av4_A 79 VDITEVPDFNTMYELY------DPVSVMFF-YRNKHMMIDLGTGNNNKINWPM---NNKQEFIDIVETIFRGARKGRGLV 148 (160)
T ss_dssp EETTTCCTTTTTTTCC------SSEEEEEE-ETTEEEEEECSSSCCSCBCSCC---CCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred EECCCCHHHHHHcCCC------CCCEEEEE-ECCEEEEEecCCCCcCeEEeec---CCHHHHHHHHHHHHHHhhcCCeEE
Confidence 3357788899999998 47998777 78888743 23321 13567777776654433233 4
Q ss_pred ccCCCCCC
Q psy17183 129 QCPVNWTT 136 (145)
Q Consensus 129 ~~p~~w~~ 136 (145)
.||.++..
T Consensus 149 ~~p~~~~~ 156 (160)
T 2av4_A 149 ISPKDYST 156 (160)
T ss_dssp ECSSCC--
T ss_pred ECCCccch
Confidence 48888653
No 220
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=78.53 E-value=5.2 Score=25.29 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=30.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccccC
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDST 126 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~ 126 (145)
.|.+.+++..||+. .|+.++ .+|+++. +. .+.+++.+.|++......|
T Consensus 34 id~~~~l~~~~g~~-------vPtl~~--~~G~~v~---g~----~~~~~L~~~l~~~~~~~~~ 81 (87)
T 1ttz_A 34 IDDDAALESAYGLR-------VPVLRD--PMGRELD---WP----FDAPRLRAWLDAAPHALEH 81 (87)
T ss_dssp CTTCHHHHHHHTTT-------CSEEEC--TTCCEEE---SC----CCHHHHHHHHHTCC-----
T ss_pred CCCCHHHHHHhCCC-------cCeEEE--ECCEEEe---CC----CCHHHHHHHHHHHHHHHhh
Confidence 44567788889875 587776 7788864 32 3467888888766554443
No 221
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=74.59 E-value=8.1 Score=28.51 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=33.9
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCC-CC--CHHHHHHHHHhcc
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV-GR--NLKEILRQVEAFQ 121 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~-~~--~~~ell~~i~~l~ 121 (145)
+..++..|++. ..|+.+++ ++|+++..++|.... +. ..+++.+.|....
T Consensus 161 ~~~l~~~~~i~------~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 161 NTGAGDRFSSD------VLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp HHTCSTTSCGG------GCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred cHHHHHHCCCC------CCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 34466677776 47999998 699999888876532 22 3577777777654
No 222
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=74.27 E-value=6.1 Score=28.72 Aligned_cols=70 Identities=4% Similarity=-0.058 Sum_probs=41.7
Q ss_pred EEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEE---------EEEeecCC--CCCCHHHHHHHHHhccccccCCcc
Q psy17183 61 LLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLR---------SMNVSDIQ--VGRNLKEILRQVEAFQLVDSTDTQ 129 (145)
Q Consensus 61 llsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~---------~~~~~~~~--~~~~~~ell~~i~~l~~~~~~~~~ 129 (145)
+=.|.+.++++.||+. +.|+.+++-+.+... ....+..+ .++..+.+.+.|.+.-...- +..
T Consensus 87 vD~d~~~~la~~~~I~------siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i-~I~ 159 (178)
T 3ga4_A 87 VDVNEVPQLVKDLKLQ------NVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI-TVP 159 (178)
T ss_dssp EETTTCHHHHHHTTCC------SSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC-CCC
T ss_pred EECccCHHHHHHcCCC------CCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc-ccc
Confidence 3366789999999998 579999995444332 00111122 26788888888866433221 466
Q ss_pred cCCCCCCC
Q psy17183 130 CPVNWTTG 137 (145)
Q Consensus 130 ~p~~w~~~ 137 (145)
=|.||++.
T Consensus 160 rp~ny~~~ 167 (178)
T 3ga4_A 160 QAFNVQEE 167 (178)
T ss_dssp CSCC----
T ss_pred CCCChHHh
Confidence 79999863
No 223
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=73.77 E-value=6.8 Score=30.44 Aligned_cols=49 Identities=14% Similarity=0.009 Sum_probs=31.4
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCC-CcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKR-GYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~d-G~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+...++.|++. ..|+.+++++. |+....+.|. ++.+++.+.|+...
T Consensus 307 vd~~~~~~~~~~v~------~~Pt~~~~~~~~~~~~~~~~G~----~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 307 MDSTANEVEAVKVH------SFPTLKFFPASADRTVIDYNGE----RTLDGFKKFLESGG 356 (361)
T ss_dssp EETTTCBCSSCCCC------SSSEEEEECSSSSCCCEECCSC----SSHHHHHHHHTTTS
T ss_pred EECCccchhhcCCc------ccCeEEEEECCCCcceeEecCC----CCHHHHHHHHHhcC
Confidence 34433335567776 37999999655 5655555443 56888888886553
No 224
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=72.76 E-value=5.8 Score=33.31 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=15.4
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCC
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRG 94 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG 94 (145)
..++++.|++. ..|+++++++.|
T Consensus 93 ~~~la~~y~V~------~~PTlilf~~gg 115 (470)
T 3qcp_A 93 EVDLCRKYDIN------FVPRLFFFYPRD 115 (470)
T ss_dssp CHHHHHHTTCC------SSCEEEEEEESS
T ss_pred CHHHHHHcCCC------ccCeEEEEECCC
Confidence 44567777776 368888886554
No 225
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=72.08 E-value=19 Score=25.00 Aligned_cols=40 Identities=10% Similarity=0.162 Sum_probs=23.1
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.+.++.+|+. ..|+ |||| |+.. ..+. +.+++.+.|+.+.
T Consensus 144 ~~~~a~~~gv~------gtPt-~vin--g~~~--~~g~-----~~~~l~~~i~~~~ 183 (193)
T 2rem_A 144 ARAYALKVRPV------GTPT-IVVN--GRYM--VTGH-----DFEDTLRITDYLV 183 (193)
T ss_dssp HHHHHHHHCCS------SSSE-EEET--TTEE--ECCS-----SHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC------CCCe-EEEC--CEEE--ecCC-----CHHHHHHHHHHHH
Confidence 44556677766 3688 7775 5532 1122 4677777766553
No 226
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=71.42 E-value=7.8 Score=25.05 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=25.2
Q ss_pred CchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 65 STHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 65 ~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
...++++.||+. ..|+.+| +|++ +.|. ++.+++.+.+
T Consensus 54 ~~~~l~~~~~V~------~~PT~~i---~G~~---~~G~----~~~~~l~~~~ 90 (106)
T 3kp8_A 54 PQAQECTEAGIT------SYPTWII---NGRT---YTGV----RSLEALAVAS 90 (106)
T ss_dssp CCCHHHHHTTCC------SSSEEEE---TTEE---EESC----CCHHHHHHHH
T ss_pred hhHHHHHHcCCe------EeCEEEE---CCEE---ecCC----CCHHHHHHHh
Confidence 567899999998 3788555 7864 3444 4466666654
No 227
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=69.67 E-value=8.3 Score=26.03 Aligned_cols=50 Identities=10% Similarity=0.014 Sum_probs=33.3
Q ss_pred ccEEecCchH----HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 59 VPLLSDSTHA----ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 59 fpllsD~~~~----va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
|-+-.|.... +|..||+.- ..|+.+++ ++|++++...-.. -+.+++.+++
T Consensus 58 ~~vdVde~r~~Sn~IA~~~~V~h-----~sPq~il~-k~G~~v~~~SH~~---I~~~~l~~~~ 111 (112)
T 3iv4_A 58 YYLIVQQERDLSDYIAKKTNVKH-----ESPQAFYF-VNGEMVWNRDHGD---INVSSLAQAE 111 (112)
T ss_dssp EEEEGGGGHHHHHHHHHHHTCCC-----CSSEEEEE-ETTEEEEEEEGGG---CSHHHHHHHT
T ss_pred EEEEeecCchhhHHHHHHhCCcc-----CCCeEEEE-ECCEEEEEeeccc---cCHHHHHHhh
Confidence 3344555544 899999983 26999999 9999998854321 1245555543
No 228
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=69.17 E-value=4.6 Score=29.23 Aligned_cols=44 Identities=9% Similarity=0.119 Sum_probs=30.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.|...++++.||+. ..|++++ +|++ ..+.|. ++.+++.+.|+.+
T Consensus 175 ~~~~~~l~~~~~v~------~~Pt~~~---~G~~-~~~~G~----~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 175 ASENQDLAEQFQVV------GVPKIVI---NKGV-AEFVGA----QPENAFLGYIMAV 218 (229)
T ss_dssp GGGCHHHHHHTTCC------SSSEEEE---GGGT-EEEESC----CCHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc------ccCEEEE---CCEE-EEeeCC----CCHHHHHHHHHHH
Confidence 45678899999987 3799888 7774 445554 3456677666554
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=68.40 E-value=19 Score=25.20 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=15.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSV 30 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~ 30 (145)
|....+.+.++. +++.. ++.+.-+..
T Consensus 40 C~~~~~~l~~l~--~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 40 CYAFEPTIVPWS--EKLPA-DVHFVRLPA 65 (192)
T ss_dssp HHHHHHHHHHHH--HTCCT-TEEEEEEEC
T ss_pred HHHhhHHHHHHH--HhCCC-CeEEEEEeh
Confidence 677777776665 35543 565554443
No 230
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=64.86 E-value=25 Score=22.60 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=28.5
Q ss_pred cceEEEEECCCCcEEEEEeecCCC-CCCHHHHHHHHHhcccc
Q psy17183 83 SLRAYYIIDKRGYLRSMNVSDIQV-GRNLKEILRQVEAFQLV 123 (145)
Q Consensus 83 ~~p~tfIID~dG~I~~~~~~~~~~-~~~~~ell~~i~~l~~~ 123 (145)
.....|.||++|+|....+-.... ..--+++++++++.++.
T Consensus 41 ~V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~~~f~ 82 (106)
T 2k9k_A 41 FVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKKWKYQ 82 (106)
T ss_dssp EEEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHHCCCC
T ss_pred EEEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHhCCCC
Confidence 356789999999998877643221 22346778888887764
No 231
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=63.65 E-value=36 Score=25.52 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=31.7
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCc--EEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGY--LRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~--I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+.++++.|++... ..|+.+++ ++|+ ....+.| .++.+++.+.|+..
T Consensus 70 ~~~l~~~~~V~~~----~~PTl~~f-~~G~~~~~~~y~G----~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 70 NMELSEKYKLDKE----SYPVFYLF-RDGDFENPVPYTG----AVKVGAIQRWLKGQ 117 (240)
T ss_dssp SHHHHHHTTCCGG----GCSEEEEE-ETTCSSCCEECCS----CSCHHHHHHHHHHT
T ss_pred hHHHHHHcCCCCC----CCCEEEEE-eCCCcCcceeecC----CCCHHHHHHHHHHh
Confidence 6789999998721 26998888 6776 2223333 35678888888765
No 232
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=63.08 E-value=23 Score=27.77 Aligned_cols=55 Identities=20% Similarity=0.307 Sum_probs=35.5
Q ss_pred HHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCC--------------CCCCHHHHHHHHHhccccccCC
Q psy17183 68 AISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQ--------------VGRNLKEILRQVEAFQLVDSTD 127 (145)
Q Consensus 68 ~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~--------------~~~~~~ell~~i~~l~~~~~~~ 127 (145)
++++++|+. | ..+.-|++|++|++....+++.| .|-++.+++..|-.+...++|-
T Consensus 285 ~~~~aLg~~----G-~~~VDf~~~~dg~~~vlEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~li~~aler~~~ 353 (357)
T 4fu0_A 285 TIYKALGCS----G-FSRVDMFYTPSGEIVFNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKLIGLYVELEHH 353 (357)
T ss_dssp HHHHHTTCC----E-EEEEEEEECTTCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHTTC-----
T ss_pred HHHHHhCCc----c-eEEEEEEEeCCCCEEEEEEeCCCCCCcccHHHHHHHHhCcCHHHHHHHHHHHHhccccc
Confidence 344555654 3 35788999999999888887643 2456778888877777666664
No 233
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=61.93 E-value=16 Score=25.70 Aligned_cols=27 Identities=11% Similarity=-0.050 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHhhhhhhhcCCcEEEEEeCC
Q psy17183 2 DTKIACDVLKLVRKEILIVSPFQIIAVSVD 31 (145)
Q Consensus 2 ~t~e~~~~~~~~~~~~f~~~gv~vi~VS~D 31 (145)
|....+.+.++. +++.. ++.+.-+..+
T Consensus 40 C~~~~~~l~~l~--~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 40 CAAIEPMVEDWA--KTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp HHHHHHHHHHHH--HTCCT-TEEEEEEECC
T ss_pred HHHhhHHHHHHH--HHCCC-CeEEEEEecc
Confidence 777778787776 45544 5777777654
No 234
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=61.85 E-value=21 Score=22.88 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=33.7
Q ss_pred cEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEee
Q psy17183 23 FQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 23 v~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~ 102 (145)
..-+++.....+...++.+++++.+ + +++..+... .+|.. | ..+..|+.||+|.+......
T Consensus 68 ~~h~~~~~~~~~d~~~~~~~l~~~G------~-----~~~~~p~~~---~~~~~----~-~~~~~~~~DPdGn~iel~~~ 128 (135)
T 3rri_A 68 PRHFGITFRDKKHFDNLYKLAKQRG------I-----PFYHDLSRR---FEGLI----E-EHETFFLIDPSNNLLEFKYY 128 (135)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHTT------C-----CEEEEEEEE---STTST----T-CEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEcChHhHHHHHHHHHHcC------C-----ceecCcccc---cCCCC----C-ceEEEEEECCCCCEEEEEEE
Confidence 3345566655566667766665553 3 333332111 01111 1 24678999999998876544
No 235
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=60.78 E-value=18 Score=29.52 Aligned_cols=55 Identities=16% Similarity=0.191 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC--chHHH
Q psy17183 3 TKIACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS--THAIS 70 (145)
Q Consensus 3 t~e~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~--~~~va 70 (145)
|....+..++. .+|.+.|.++|=|++.+.++.+++.+ +++. . +.||+.|. +..++
T Consensus 42 T~D~~atv~Qi--~~l~~aG~diVRvavp~~~~a~al~~-I~~~-------~---~vPlvaDiHf~~~la 98 (366)
T 3noy_A 42 THDVEATLNQI--KRLYEAGCEIVRVAVPHKEDVEALEE-IVKK-------S---PMPVIADIHFAPSYA 98 (366)
T ss_dssp TTCHHHHHHHH--HHHHHTTCCEEEEECCSHHHHHHHHH-HHHH-------C---SSCEEEECCSCHHHH
T ss_pred CcCHHHHHHHH--HHHHHcCCCEEEeCCCChHHHHHHHH-HHhc-------C---CCCEEEeCCCCHHHH
Confidence 34445555666 47889999999999988777776644 4433 6 89999994 66555
No 236
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=60.71 E-value=7.5 Score=26.81 Aligned_cols=19 Identities=21% Similarity=0.116 Sum_probs=16.1
Q ss_pred eEEEEECCCCcEEEEEeec
Q psy17183 85 RAYYIIDKRGYLRSMNVSD 103 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~~~ 103 (145)
.+.||+|++|+++....+.
T Consensus 3 ~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEETTSCEEEEEECS
T ss_pred EEEEEEcCCCCEEEEEeCC
Confidence 5789999999999887764
No 237
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=60.29 E-value=11 Score=25.12 Aligned_cols=44 Identities=18% Similarity=0.314 Sum_probs=33.0
Q ss_pred HHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCC---CCHHHHHHHHHhc
Q psy17183 70 SKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVG---RNLKEILRQVEAF 120 (145)
Q Consensus 70 a~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~---~~~~ell~~i~~l 120 (145)
+..|++. ..|+.+++ ++|+++....|....+ .+.+++...|.+.
T Consensus 66 ~~~~~v~------~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 66 IQHYHDN------CLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp STTCCGG------GCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred HHHCCCC------CCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 5777776 57998888 8999999999876432 3567777777654
No 238
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=60.27 E-value=18 Score=22.63 Aligned_cols=50 Identities=6% Similarity=0.170 Sum_probs=32.0
Q ss_pred HHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCC-CCCHHHHHHHHHhccccc
Q psy17183 70 SKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQV-GRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 70 a~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~-~~~~~ell~~i~~l~~~~ 124 (145)
|+..|+. | .....|.||++|+|....+-.... ..--++.+++++++++..
T Consensus 18 a~~~~~~----G-~V~v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~~~f~P 68 (90)
T 1u07_A 18 AQALRIE----G-QVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEP 68 (90)
T ss_dssp HHHHTCC----E-EEEEEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTTCEECT
T ss_pred HHHCCCc----e-EEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHhCCCCC
Confidence 4445554 3 356789999999998877643221 222456778888777543
No 239
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=59.52 E-value=10 Score=29.96 Aligned_cols=46 Identities=13% Similarity=0.136 Sum_probs=33.9
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+|...++++.||+. ..|+.+++ ++|++. .+.| .++.+.+.+.|+..
T Consensus 77 ~~~~~~l~~~~~V~------~~PTl~~f-~~G~~~-~y~G----~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 77 SEKDAAVAKKLGLT------EEDSIYVF-KEDEVI-EYDG----EFSADTLVEFLLDV 122 (367)
T ss_dssp TTTTHHHHHHHTCC------STTEEEEE-ETTEEE-ECCS----CCSHHHHHHHHHHH
T ss_pred CcccHHHHHHcCCC------cCceEEEE-ECCcEE-EeCC----CCCHHHHHHHHHHh
Confidence 56788999999998 37999999 478763 2223 46788888877654
No 240
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.49 E-value=11 Score=30.98 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=34.7
Q ss_pred EecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 62 LSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 62 lsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
+.|..+.+++.||+.. ...++|-|||.|.+..... + .....++.+++.++
T Consensus 483 ~~d~~~~~~~~~~~~~-------~~~~lvRPD~~va~r~~~~-~-~~~~~~l~~~~~~~ 532 (535)
T 3ihg_A 483 LTDPESAVSERYGIGK-------AGASLVRPDGIVAWRTDEA-A-ADAAQTLEGVLRRV 532 (535)
T ss_dssp BBCSSCCHHHHHTCTT-------TCEEEECTTSBEEEEESSC-C-SSHHHHHHHHHHHH
T ss_pred cccCcchHHHHhCCCC-------CceEeeCCCceeEEecCCC-C-CCHHHHHHHHHHHH
Confidence 4678899999999874 4679999999999886542 1 11234455555543
No 241
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=57.45 E-value=16 Score=21.74 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=18.2
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcEEEE
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSM 99 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~ 99 (145)
..++++.||+. +.|+.+| +|++++.
T Consensus 44 ~~~~~~~~gv~------~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 44 RIAEAEKAGVK------SVPALVI---DGAAFHI 68 (80)
T ss_dssp THHHHHHHTCC------EEEEEEE---TTEEEEE
T ss_pred hHHHHHHcCCC------cCCEEEE---CCEEEEe
Confidence 45678889887 4798776 7887653
No 242
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=57.44 E-value=6.4 Score=26.22 Aligned_cols=51 Identities=12% Similarity=0.044 Sum_probs=32.8
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECC-CCcEEEEEe--ecCCCCCCHHHHHHHHHhccc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDK-RGYLRSMNV--SDIQVGRNLKEILRQVEAFQL 122 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~-dG~I~~~~~--~~~~~~~~~~ell~~i~~l~~ 122 (145)
.|....++..||+... ..|+.+|++. +|+. +... +. .+.+++.+.|+++..
T Consensus 62 ~d~~~~~a~~~gi~~~----~iPtl~i~~~~~g~~-~~~~~~g~----~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 62 AKAFGAHAGNLNLKTD----KFPAFAIQEVAKNQK-FPFDQEKE----ITFEAIKAFVDDFVA 115 (133)
T ss_dssp TTTTGGGTTTTTCCSS----SSSEEEEECTTTCCB-CCCCSSSC----CCHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHcCCCcc----cCCEEEEEecCcCcc-cCCCCccc----cCHHHHHHHHHHHHc
Confidence 3556778999998731 3799999874 5776 4433 33 345677777765553
No 243
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=57.23 E-value=9.9 Score=26.82 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=16.5
Q ss_pred eEEEEECCCCcEEEEEeecC
Q psy17183 85 RAYYIIDKRGYLRSMNVSDI 104 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~~~~ 104 (145)
.+.||+|++|+++....+..
T Consensus 3 ~~i~Il~~~Gk~~lsk~y~~ 22 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQKWYLA 22 (158)
T ss_dssp EEEEEECSSSCEEEEEESSC
T ss_pred EEEEEECCCCCEEEEEeCCC
Confidence 57899999999998876653
No 244
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=54.88 E-value=15 Score=30.27 Aligned_cols=41 Identities=27% Similarity=0.229 Sum_probs=31.7
Q ss_pred hhhcCCcEEEEEeCCCHHHHHHHHH---HHhhcCCCCCCCCCCCCccEEecCc
Q psy17183 17 ILIVSPFQIIAVSVDSHLAHLAWTK---TLTATSSNRSAIDPSKIVPLLSDST 66 (145)
Q Consensus 17 ~f~~~gv~vi~VS~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~fpllsD~~ 66 (145)
++.+.|.++|=|++.+.++.+++.+ ++.+.+ . +.||+.|.+
T Consensus 46 ~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~------~---~vPLVADiH 89 (406)
T 4g9p_A 46 ELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEG------V---EVPLVGDFH 89 (406)
T ss_dssp HHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTT------C---CCCEEEECC
T ss_pred HHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcC------C---CCceEeeec
Confidence 6788999999999999888877643 333344 6 899999974
No 245
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=54.84 E-value=13 Score=26.78 Aligned_cols=34 Identities=9% Similarity=-0.000 Sum_probs=25.6
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeec
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSD 103 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~ 103 (145)
.|.+.++++.||+. ..|+..+++ +|.....+.|.
T Consensus 67 ~~~~~~l~~~~~v~------~~Ptl~~~~-~~~~~~~~~G~ 100 (229)
T 2ywm_A 67 PFTHKEETEKYGVD------RVPTIVIEG-DKDYGIRYIGL 100 (229)
T ss_dssp TTTCHHHHHHTTCC------BSSEEEEES-SSCCCEEEESC
T ss_pred CcccHHHHHHcCCC------cCcEEEEEC-CCcccceecCC
Confidence 45689999999998 379999985 56555556665
No 246
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=53.08 E-value=3.7 Score=31.82 Aligned_cols=18 Identities=22% Similarity=0.573 Sum_probs=13.9
Q ss_pred CCcccCCCCCCCCCcccc
Q psy17183 126 TDTQCPVNWTTGQPSVKV 143 (145)
Q Consensus 126 ~~~~~p~~w~~~~~~~~~ 143 (145)
+.++|+|+|++|.+.+.+
T Consensus 140 ~s~~t~I~WK~g~~~~~~ 157 (264)
T 2zd7_A 140 TSEPVPIEWPQSYDSINP 157 (264)
T ss_dssp EECCCCCCCCGGGGGGCT
T ss_pred eEeecccccCCCccccch
Confidence 457899999998776543
No 247
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=52.53 E-value=43 Score=21.43 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=33.9
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhh---cCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEE
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTA---TSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRS 98 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~---~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~ 98 (145)
+..-+++.+++.+...++.+++++ .+ + +++..+... .+ | +..|+.||+|....
T Consensus 72 ~~~~~~~~v~~~~dv~~~~~~l~~~~~~G------~-----~~~~~p~~~---~~-------g---~~~~~~DPdGn~ie 127 (132)
T 3sk2_A 72 RFSEIGIMLPTGEDVDKLFNEWTKQKSHQ------I-----IVIKEPYTD---VF-------G---RTFLISDPDGHIIR 127 (132)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHCSSSC------C-----EEEEEEEEE---TT-------E---EEEEEECTTCCEEE
T ss_pred CcceEEEEeCCHHHHHHHHHHHHhhhcCC------C-----EEeeCCccc---Cc-------e---EEEEEECCCCCEEE
Confidence 344477777777777777777665 43 3 333222100 01 2 67899999999876
Q ss_pred EEe
Q psy17183 99 MNV 101 (145)
Q Consensus 99 ~~~ 101 (145)
...
T Consensus 128 l~~ 130 (132)
T 3sk2_A 128 VCP 130 (132)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 248
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=51.46 E-value=48 Score=21.69 Aligned_cols=55 Identities=16% Similarity=0.072 Sum_probs=34.1
Q ss_pred EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeec
Q psy17183 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSD 103 (145)
Q Consensus 25 vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~ 103 (145)
.+++.+++.+...++.+++.+.+ ..++..+. . .| -.++.|+-||||.+.......
T Consensus 80 ~~a~~v~~~~~vd~~~~~~~~~g-----------~~~~~~p~-----------~-~~-~~~~~~f~DPDGn~iEi~~~~ 134 (149)
T 4gym_A 80 IVCVSAIDRDDVDRFADTALGAG-----------GTVARDPM-----------D-YG-FMYGRSFHDLDGHLWEVMWMS 134 (149)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTT-----------CEECSCCE-----------E-CS-SEEEEEEECTTCCEEEEEEEC
T ss_pred EEEEEeccHHHHHHHHHHHHhcC-----------ceeecccc-----------c-cC-CEEEEEEEcCCCCEEEEEEEC
Confidence 57778888777777777654443 22222221 0 11 137889999999988776543
No 249
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=50.08 E-value=21 Score=24.11 Aligned_cols=27 Identities=19% Similarity=0.105 Sum_probs=15.7
Q ss_pred hhhhcCCcEEEEEeCCCHHHHHHHHHH
Q psy17183 16 EILIVSPFQIIAVSVDSHLAHLAWTKT 42 (145)
Q Consensus 16 ~~f~~~gv~vi~VS~D~~~~~~~~~~~ 42 (145)
+.+++.|+.+|||...+.+..++++..
T Consensus 68 ~~l~~~gl~~vGV~g~~~~~~~~~a~~ 94 (120)
T 3ghf_A 68 KIVTSTGLRIIGVSGCKDASLKVEIDR 94 (120)
T ss_dssp HHHHTTTCEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEeCCCcHHHHHHHHH
Confidence 355667777777766444444454443
No 250
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=48.75 E-value=13 Score=25.79 Aligned_cols=44 Identities=9% Similarity=0.136 Sum_probs=28.7
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.||+. ..|+.+| .+|++ ..|.. +.+++.+.|++..
T Consensus 95 v~~~~~la~~~gI~------gtPt~vi--~nG~~---i~G~~----~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 95 VAETTSLGEQFGFN------GTPTLVF--PNGRT---QSGYS----PMPQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHHHHTTCC------SSCEEEC--TTSCE---EESCC----CTTHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCC------ccCEEEE--ECCEE---eeCCC----CHHHHHHHHHHHH
Confidence 34578889999987 3688776 57764 34543 2456677666554
No 251
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=47.11 E-value=59 Score=21.41 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=35.4
Q ss_pred CCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEE
Q psy17183 21 SPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSM 99 (145)
Q Consensus 21 ~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~ 99 (145)
.|..-+++.+++.+...++.+++++.+ . +++...... ..+| ...+..|+.||+|.+...
T Consensus 85 ~g~~hi~f~v~~~~dv~~~~~~l~~~G------~-----~~~~~~p~~--~~~g-------~~~~~~~~~DPdG~~iel 143 (146)
T 3ct8_A 85 TGLNHLAFHAASREKVDELTQKLKERG------D-----PILYEDRHP--FAGG-------PNHYAVFCEDPNRIKVEI 143 (146)
T ss_dssp SSCCEEEEECSCHHHHHHHHHHHHHHT------C-----CBCCTTTTT--CTTC-------TTCCEEEEECTTCCEEEE
T ss_pred CCceEEEEECCCHHHHHHHHHHHHHcC------C-----ccccCCCcc--ccCC-------CceEEEEEECCCCCEEEE
Confidence 455678888887777777777766554 3 222210000 0011 124788999999988754
No 252
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=46.91 E-value=32 Score=23.18 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=23.2
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
.++.+.+|+. .+|.++| ||+|+..-.++ +.+|+.+.+
T Consensus 62 ~~~L~~~G~~------~LP~~~V---DGevv~~G~yP-----t~eEl~~~l 98 (110)
T 3kgk_A 62 KAFIEASGAE------GLPLLLL---DGETVMAGRYP-----KRAELARWF 98 (110)
T ss_dssp HHHHHHHCGG------GCCEEEE---TTEEEEESSCC-----CHHHHHHHH
T ss_pred HHHHHHcCcc------cCCEEEE---CCEEEEeccCC-----CHHHHHHHh
Confidence 3455667765 4687766 78888664443 356766655
No 253
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=46.34 E-value=52 Score=20.54 Aligned_cols=25 Identities=16% Similarity=0.088 Sum_probs=17.7
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEE
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~ 100 (145)
..+++.||+. ..|++| + +|+++..+
T Consensus 63 ~~l~~~~~v~------~~Pt~~-~--~g~~v~~~ 87 (116)
T 2e7p_A 63 SALAHWTGRG------TVPNVF-I--GGKQIGGC 87 (116)
T ss_dssp HHHHHHHSCC------SSCEEE-E--TTEEEECH
T ss_pred HHHHHHhCCC------CcCEEE-E--CCEEECCh
Confidence 4588999986 379884 4 68776543
No 254
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=46.11 E-value=21 Score=25.86 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=29.3
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|.+.++++.||+. ..|+.|+ .+|+. ..|. .+.+++.+.|++.+
T Consensus 167 v~~~~~l~~~~gV~------gTPt~vi--~nG~~---~~G~----~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 167 VKKHYELGIQFGVR------GTPSIVT--STGEL---IGGY----LKPADLLRALEETA 210 (211)
T ss_dssp HHHHHHHHHHHTCC------SSCEEEC--TTSCC---CCSC----CCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCC------cCCEEEE--eCCEE---ecCC----CCHHHHHHHHHhcc
Confidence 34567888999987 3688777 46752 2232 35778888887654
No 255
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=45.86 E-value=36 Score=25.74 Aligned_cols=41 Identities=5% Similarity=0.165 Sum_probs=29.0
Q ss_pred ceEEEEECCCCcEEEEEeecCCCC-CCHHHHHHHHHhccccc
Q psy17183 84 LRAYYIIDKRGYLRSMNVSDIQVG-RNLKEILRQVEAFQLVD 124 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~~~~~~~~-~~~~ell~~i~~l~~~~ 124 (145)
....|.||++|+|....+-..... .--++.+++++++++.-
T Consensus 166 V~V~f~Id~dG~V~~v~V~~SSG~~~LD~aAl~AVr~~rf~P 207 (229)
T 2grx_C 166 VKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEP 207 (229)
T ss_dssp ECEEEECCTTSCCEEEEECCCSSSTTSHHHHHHHTTSCCCCT
T ss_pred EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHhCCCC
Confidence 567899999999998877543222 23467788888887653
No 256
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=45.38 E-value=24 Score=28.74 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=23.1
Q ss_pred cceEEEEECCCCcE--EEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 83 SLRAYYIIDKRGYL--RSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 83 ~~p~tfIID~dG~I--~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
..|+.+++ ++|+. ...+.| .++.+++++.|+...
T Consensus 431 ~~Pt~~~~-~~G~~~~~~~~~G----~~~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 431 GYPTIVLY-PGGKKSESVVYQG----SRSLDSLFDFIKENG 466 (504)
T ss_dssp SSSEEEEE-CCTTSCCCCBCCS----CCCHHHHHHHHHHHC
T ss_pred ecCeEEEE-eCCceecceEecC----CCCHHHHHHHHHhcC
Confidence 36998888 88875 333333 356888888887654
No 257
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=44.49 E-value=77 Score=22.37 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=38.9
Q ss_pred ccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 59 VPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 59 fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
+.+.+..+.+-..+..-+.....-+-|+.-|+ +||.+++..---.-.|++.++|...|..
T Consensus 82 vTVFAGqDkEAt~~aR~yf~~~pPSSPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~ 141 (147)
T 3fhk_A 82 VTVFAGQDKEATAKMREYFTGAAPSSPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTA 141 (147)
T ss_dssp EEEETTTSHHHHHHHHTTSTTCCCCSSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHH
T ss_pred EEeccCCCHHHHHHHHHhcCCCCCCCchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHH
Confidence 56777777665444333321111256888888 9999998765444568888888776654
No 258
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=43.39 E-value=1.1e+02 Score=23.38 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=50.2
Q ss_pred hcCCcEEEEEeCC-CHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECC--CCc
Q psy17183 19 IVSPFQIIAVSVD-SHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDK--RGY 95 (145)
Q Consensus 19 ~~~gv~vi~VS~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~--dG~ 95 (145)
+...+.|||.-.+ +....+.|.+.+.... .|.+..-.+.++++.||+. .|+.++.-+ +++
T Consensus 33 ~~~~~~vvgff~~~~~~~~~~f~~~A~~~~----------~~~F~~t~~~~v~~~~~v~-------~~~i~lfk~f~~~~ 95 (361)
T 3uem_A 33 ESSEVAVIGFFKDVESDSAKQFLQAAEAID----------DIPFGITSNSDVFSKYQLD-------KDGVVLFKKFDEGR 95 (361)
T ss_dssp HTSSEEEEEECSCTTSHHHHHHHHHHHHCS----------SSCEEEECCHHHHHHTTCS-------SSEEEEEESSTTSE
T ss_pred hcCCcEEEEEEcCCCchHHHHHHHHHhcCC----------CceEEEECcHHHHHHhCCC-------CCeEEEEEecCCCc
Confidence 4567888887433 3345667766543332 4666666668899999986 367777755 566
Q ss_pred EEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 96 LRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 96 I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.| -++ .+.++|.+.|+...
T Consensus 96 ~~~--~g~----~~~~~i~~fi~~~~ 115 (361)
T 3uem_A 96 NNF--EGE----VTKENLLDFIKHNQ 115 (361)
T ss_dssp EEC--CSC----CCHHHHHHHHHHHS
T ss_pred ccc--CCc----CCHHHHHHHHHHcC
Confidence 654 222 35788888876543
No 259
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=43.11 E-value=24 Score=24.08 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=22.6
Q ss_pred HHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 68 AISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 68 ~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.++.+|+. ..|+ ||| +|+- . ++... ..+.+++++.|+.|-
T Consensus 141 ~~a~~~gv~------gTPt-fiI--NGky--~-v~~~~-~~s~e~~~~~i~~Ll 181 (184)
T 4dvc_A 141 KQFQDSGLT------GVPA-VVV--NNRY--L-VQGQS-AKSLDEYFDLVNYLL 181 (184)
T ss_dssp HHHHHHTCC------SSSE-EEE--TTTE--E-ECGGG-CSSHHHHHHHHHHHT
T ss_pred HHHHHcCCC------cCCE-EEE--CCEE--e-eCCcC-CCCHHHHHHHHHHHH
Confidence 344555554 3686 555 5652 2 22211 245788888887764
No 260
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=43.05 E-value=7.3 Score=29.45 Aligned_cols=16 Identities=13% Similarity=0.563 Sum_probs=12.5
Q ss_pred CCcccCCCCCCCCCcc
Q psy17183 126 TDTQCPVNWTTGQPSV 141 (145)
Q Consensus 126 ~~~~~p~~w~~~~~~~ 141 (145)
..++|+|+|++|.++.
T Consensus 152 ~s~~t~I~Wk~gkd~t 167 (225)
T 2e50_A 152 SSKSTEIKWKSGKDMT 167 (225)
T ss_dssp CEEECCCCBCSSCCC-
T ss_pred ccCCCcceecCCCCcc
Confidence 3578999999997754
No 261
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=42.48 E-value=59 Score=20.12 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=33.4
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEE
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSM 99 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~ 99 (145)
|..-+++.+++.+...++.+++++.+ . +++..+.. .. .| .+..|+.||+|.+...
T Consensus 71 g~~hi~~~v~d~~~v~~~~~~l~~~G------~-----~~~~~~~~-------~~---~g--~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 71 GWAHIAISTGTKEAVDELTEKLRQDG------F-----AIAGEPRM-------TG---DG--YYESVVLDPEGNRIEI 125 (127)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHTT------C-----CEEEEEEE-------CT---TS--CEEEEEECTTSCEEEE
T ss_pred ceEEEEEEcCCHHHHHHHHHHHHHcC------C-----eEecCccc-------CC---CC--cEEEEEECCCCCEEEE
Confidence 44567888888776777777665554 3 33322210 00 12 4788999999988654
No 262
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=42.48 E-value=66 Score=20.69 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=33.7
Q ss_pred EEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEee
Q psy17183 25 IIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 25 vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~ 102 (145)
.+++.+++.+...++.+++++.+ .+++..+... .+ | .+..|+.||+|.+......
T Consensus 78 ~~~f~v~~~~dv~~~~~~l~~~G-----------~~~~~~~~~~---~~-------g--~~~~~~~DPdG~~iel~~~ 132 (141)
T 2rbb_A 78 LLNFDVDTKEAVDKLVPVAIAAG-----------ATLIKAPYET---YY-------H--WYQAVLLDPERNVFRINNV 132 (141)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT-----------CEEEEEEEEC---TT-------S--EEEEEEECTTSCEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHHHcC-----------CeEecCcccc---CC-------c--cEEEEEECCCCCEEEEEEc
Confidence 67777777666777777665543 2333322100 01 1 4788999999998876543
No 263
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=41.33 E-value=31 Score=23.07 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=16.4
Q ss_pred cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHH
Q psy17183 83 SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQV 117 (145)
Q Consensus 83 ~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i 117 (145)
.+|.++| ||+|+..-.++ +.+|+.+.+
T Consensus 75 ~LP~~~V---DGevv~~G~yP-----t~eEl~~~l 101 (106)
T 3ktb_A 75 ALPITLV---DGEIAVSQTYP-----TTKQMSEWT 101 (106)
T ss_dssp GCSEEEE---TTEEEECSSCC-----CHHHHHHHH
T ss_pred cCCEEEE---CCEEEEeccCC-----CHHHHHHHh
Confidence 4677765 78887554333 356666554
No 264
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=39.69 E-value=19 Score=22.65 Aligned_cols=16 Identities=25% Similarity=0.119 Sum_probs=13.6
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+++|.+|+|.+...
T Consensus 17 gviv~D~~g~I~~~N~ 32 (121)
T 4hi4_A 17 NVMIADNDLNIIYMNR 32 (121)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred cEEEEcCCCeEEEecH
Confidence 6799999999998753
No 265
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=39.62 E-value=72 Score=20.30 Aligned_cols=57 Identities=11% Similarity=0.079 Sum_probs=34.8
Q ss_pred CCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEE
Q psy17183 21 SPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 21 ~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~ 100 (145)
.|..-+++.+++.....++.+++++.+ + .+ . .+.. ..+ | +..|+.||+|.+....
T Consensus 71 ~g~~h~~f~v~~~~d~~~~~~~l~~~G------~---~~--~-~~~~---~~~-------g---~~~~~~DPdG~~iel~ 125 (136)
T 2rk0_A 71 PGLDHLSFSVESMTDLDVLEERLAKAG------A---AF--T-PTQE---LPF-------G---WILAFRDADNIALEAM 125 (136)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHHT------C---CB--C-CCEE---ETT-------E---EEEEEECTTCCEEEEE
T ss_pred CCcceEEEEeCCHHHHHHHHHHHHHCC------C---cc--c-Cccc---cCC-------c---eEEEEECCCCCEEEEE
Confidence 345567788876667777777665554 3 32 1 1110 001 2 6789999999988765
Q ss_pred ee
Q psy17183 101 VS 102 (145)
Q Consensus 101 ~~ 102 (145)
..
T Consensus 126 ~~ 127 (136)
T 2rk0_A 126 LG 127 (136)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 266
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=39.53 E-value=20 Score=19.94 Aligned_cols=16 Identities=25% Similarity=0.320 Sum_probs=13.2
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+++|.+|+|.+...
T Consensus 4 ~i~~~d~~g~i~~~N~ 19 (96)
T 3a0s_A 4 AIITLSKDGRITEWNK 19 (96)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEEcCCCCEeehhH
Confidence 4689999999997754
No 267
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.53 E-value=1e+02 Score=21.92 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=26.0
Q ss_pred hCCCccCCCCcceEEEEECCCC---cEEEEEeecCCCCCCHHHHHHHHHh
Q psy17183 73 YGCYLSSAGHSLRAYYIIDKRG---YLRSMNVSDIQVGRNLKEILRQVEA 119 (145)
Q Consensus 73 yg~~~~~~g~~~p~tfIID~dG---~I~~~~~~~~~~~~~~~ell~~i~~ 119 (145)
|++. ..|...||++.| .|+....|.. +.++++..|..
T Consensus 126 ~~~~------~~P~l~ii~~~~~~~~vl~~~~G~~----~~~~ll~~L~~ 165 (178)
T 2ec4_A 126 QKTD------QFPLFLIIMGKRSSNEVLNVIQGNT----TVDELMMRLMA 165 (178)
T ss_dssp SCST------TCSEEEEECCCSSCCCEEEEECSCC----CHHHHHHHHHH
T ss_pred cCCC------CCCeEEEEEcCCCceEEEEEEeCCC----CHHHHHHHHHH
Confidence 6665 379999998774 6777777764 46777766643
No 268
>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}
Probab=39.34 E-value=98 Score=23.70 Aligned_cols=58 Identities=14% Similarity=-0.012 Sum_probs=37.8
Q ss_pred CCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEE
Q psy17183 21 SPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 21 ~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~ 100 (145)
.|+.-+++.+++.+...++.+++++.+ + .+ ...+. .. | ..+..++.||+|......
T Consensus 66 ~g~~~~af~v~~~~dld~~~~~l~~~G------~---~~--~~~~~-----~~-------~-~~~~~~f~DPdG~~iel~ 121 (339)
T 3lm4_A 66 AGMGHAAMRTSSPEALERRAKSLTDGN------V---DG--TWSED-----QF-------G-YGKTFEYQSPDGHNLQLL 121 (339)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTT------C---CE--EEECC-----ST-------T-BCCEEEEECTTCCEEEEE
T ss_pred CCcceEEEEeCCHHHHHHHHHHHHHCC------C---ce--eeccC-----CC-------C-ceEEEEEECCCCCEEEEE
Confidence 455667788888888888888776654 4 33 22221 01 1 136789999999988776
Q ss_pred ee
Q psy17183 101 VS 102 (145)
Q Consensus 101 ~~ 102 (145)
.+
T Consensus 122 ~~ 123 (339)
T 3lm4_A 122 WE 123 (339)
T ss_dssp CC
T ss_pred Ee
Confidence 54
No 269
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=38.18 E-value=78 Score=20.25 Aligned_cols=60 Identities=13% Similarity=-0.021 Sum_probs=38.6
Q ss_pred CCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEE
Q psy17183 21 SPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 21 ~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~ 100 (145)
.+..-+++.+++.+...++.+++++.+ . +++..+... .+ | .+..|+.||+|.+....
T Consensus 70 ~~~~~l~f~v~~~~dv~~~~~~l~~~G------~-----~~~~~~~~~---~~-------g--~~~~~~~DPdG~~iel~ 126 (138)
T 2a4x_A 70 GHRFAIAFEFPDTASVDKKYAELVDAG------Y-----EGHLKPWNA---VW-------G--QRYAIVKDPDGNVVDLF 126 (138)
T ss_dssp SCSEEEEEECSSHHHHHHHHHHHHHTT------C-----CEEEEEEEE---TT-------T--EEEEEEECTTCCEEEEE
T ss_pred CCeEEEEEEeCCHHHHHHHHHHHHHCC------C-----ceeeCCccc---CC-------C--cEEEEEECCCCCEEEEE
Confidence 456678888887777777777765554 3 333322110 01 2 37889999999998776
Q ss_pred eec
Q psy17183 101 VSD 103 (145)
Q Consensus 101 ~~~ 103 (145)
...
T Consensus 127 ~~~ 129 (138)
T 2a4x_A 127 APL 129 (138)
T ss_dssp EEC
T ss_pred eCC
Confidence 544
No 270
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=37.17 E-value=26 Score=21.19 Aligned_cols=16 Identities=31% Similarity=0.248 Sum_probs=13.5
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+++|.+|+|++...
T Consensus 19 ~i~~~D~~g~I~~~N~ 34 (115)
T 3b33_A 19 ATLILDDGLAIRYANP 34 (115)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCcEEEECH
Confidence 5799999999998754
No 271
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=37.15 E-value=16 Score=17.64 Aligned_cols=16 Identities=19% Similarity=0.081 Sum_probs=13.0
Q ss_pred eEEEEECCCCcEEEEE
Q psy17183 85 RAYYIIDKRGYLRSMN 100 (145)
Q Consensus 85 p~tfIID~dG~I~~~~ 100 (145)
-++.|.|++|+++...
T Consensus 5 ~ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADL 20 (26)
T ss_pred CCCEEEeCCCCEeeec
Confidence 3589999999998764
No 272
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=36.88 E-value=8.3 Score=31.94 Aligned_cols=16 Identities=13% Similarity=0.582 Sum_probs=12.5
Q ss_pred cCCcccCCCCCC-CCCc
Q psy17183 125 STDTQCPVNWTT-GQPS 140 (145)
Q Consensus 125 ~~~~~~p~~w~~-~~~~ 140 (145)
.+.++|+|+|++ |.++
T Consensus 267 ~~~egt~I~WK~~Gknl 283 (417)
T 2ayu_A 267 DHAEGCEISWKDNAHNV 283 (417)
T ss_dssp EEEEECCCCBSCTTTCT
T ss_pred ccccCcceeeecCCCCc
Confidence 356899999999 8654
No 273
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=36.39 E-value=18 Score=23.54 Aligned_cols=15 Identities=20% Similarity=0.184 Sum_probs=12.9
Q ss_pred EEEEECCCCcEEEEE
Q psy17183 86 AYYIIDKRGYLRSMN 100 (145)
Q Consensus 86 ~tfIID~dG~I~~~~ 100 (145)
...|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 478999999999865
No 274
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=36.05 E-value=95 Score=20.64 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=37.7
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
|..-+++.+++.+...++.+++++.+ + .+ +.... + . .| .+..|+.||+|.+.....
T Consensus 76 g~~hi~f~V~~~~dld~~~~~l~~~G------~---~~--~~~~~------~--~---~g--~~~~~~~DPdG~~iel~~ 131 (160)
T 3r4q_A 76 GQGHFCFYADDKAEVDEWKTRFEALE------I---PV--EHYHR------W--P---NG--SYSVYIRDPAGNSVEVGE 131 (160)
T ss_dssp EECEEEEEESSHHHHHHHHHHHHTTT------C---CC--CEEEE------C--T---TS--CEEEEEECTTCCEEEEEE
T ss_pred ceeEEEEEeCCHHHHHHHHHHHHHCC------C---EE--ecccc------c--c---CC--cEEEEEECCCCCEEEEEe
Confidence 44567888877778888888766554 3 32 22211 0 0 12 478999999999987766
Q ss_pred ec
Q psy17183 102 SD 103 (145)
Q Consensus 102 ~~ 103 (145)
.+
T Consensus 132 ~~ 133 (160)
T 3r4q_A 132 GK 133 (160)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 275
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=35.50 E-value=11 Score=30.57 Aligned_cols=15 Identities=7% Similarity=0.310 Sum_probs=12.3
Q ss_pred CCcccCCCCCCCCCc
Q psy17183 126 TDTQCPVNWTTGQPS 140 (145)
Q Consensus 126 ~~~~~p~~w~~~~~~ 140 (145)
+.++|+|+|++|.++
T Consensus 194 ~se~t~I~WK~GKdl 208 (359)
T 3fs3_A 194 HTEATVIDWYDNKNI 208 (359)
T ss_dssp EEEECCCCBCTTCCT
T ss_pred cceeeeeeEeCCCcc
Confidence 357899999999764
No 276
>2l3i_A Aoxki4A, antimicrobial peptide in spider venom; antimicrobial protein; NMR {Araneae}
Probab=35.03 E-value=15 Score=18.47 Aligned_cols=10 Identities=30% Similarity=1.102 Sum_probs=7.8
Q ss_pred CcccCCCCCC
Q psy17183 127 DTQCPVNWTT 136 (145)
Q Consensus 127 ~~~~p~~w~~ 136 (145)
++-||..|+-
T Consensus 1 gircpkswkc 10 (30)
T 2l3i_A 1 GIRCPKSWKC 10 (30)
T ss_dssp CCCSSSCSCC
T ss_pred CCCCCcchhH
Confidence 3569999984
No 277
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=34.63 E-value=61 Score=22.78 Aligned_cols=44 Identities=5% Similarity=0.039 Sum_probs=25.8
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.+.++.+|+. ..|+.+|. .+|+.+....|.. +.+++.+.|+++.
T Consensus 166 ~~~a~~~gv~------g~Pt~~i~-~~G~~~~~~~G~~----~~~~l~~~l~~~~ 209 (216)
T 2in3_A 166 FQRVAQWGIS------GFPALVVE-SGTDRYLITTGYR----PIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHTTCC------SSSEEEEE-ETTEEEEEESSCC----CHHHHHHHHHHHH
T ss_pred HHHHHHcCCc------ccceEEEE-ECCEEEEeccCCC----CHHHHHHHHHHHH
Confidence 4445566665 36887765 4677544444442 3667777776554
No 278
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=34.53 E-value=60 Score=21.96 Aligned_cols=39 Identities=10% Similarity=0.092 Sum_probs=25.0
Q ss_pred ceEEEEECCCCcEEEEEeecCCCCCCHH-HHHHHHHhccc
Q psy17183 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLK-EILRQVEAFQL 122 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~~~~~~~~~~~~-ell~~i~~l~~ 122 (145)
....|-||++|+|....+-..+....++ .++++|....+
T Consensus 54 ~~V~v~l~~dG~v~~v~v~~SSG~~~lD~AAl~AV~ra~p 93 (129)
T 1lr0_A 54 VEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVGR 93 (129)
T ss_dssp EEEEEEECTTSBEEEEEEEECCSCHHHHHHHHHHHHHHCB
T ss_pred EEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHHhCC
Confidence 4567889999999988765433222343 56666665553
No 279
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=34.00 E-value=86 Score=20.44 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=15.0
Q ss_pred eEEEEECCCCcEEEEEee
Q psy17183 85 RAYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~~ 102 (145)
+..|+.||+|.+......
T Consensus 109 ~~~~~~DPdG~~iel~~~ 126 (150)
T 3bqx_A 109 LRGYVADPDGHIWEIAFN 126 (150)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeC
Confidence 788999999999877654
No 280
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=33.44 E-value=88 Score=19.49 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=14.0
Q ss_pred eEEEEECCCCcEEEEEe
Q psy17183 85 RAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~ 101 (145)
+..|+.||+|.+.....
T Consensus 109 ~~~~~~DPdG~~iel~~ 125 (135)
T 1f9z_A 109 VIAFVEDPDGYKIELIE 125 (135)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEe
Confidence 57899999999887654
No 281
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=32.39 E-value=33 Score=21.23 Aligned_cols=16 Identities=13% Similarity=0.204 Sum_probs=13.5
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|++|+|.+..-
T Consensus 24 ~i~~~D~~g~i~~~N~ 39 (118)
T 3fg8_A 24 GFMALDEDLRIIYVNS 39 (118)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCeEEEECH
Confidence 4789999999998764
No 282
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=31.47 E-value=19 Score=26.34 Aligned_cols=15 Identities=13% Similarity=0.490 Sum_probs=12.1
Q ss_pred CcccCCCCCCCCCcc
Q psy17183 127 DTQCPVNWTTGQPSV 141 (145)
Q Consensus 127 ~~~~p~~w~~~~~~~ 141 (145)
...|+|+|++|.++.
T Consensus 124 ~~~t~I~Wk~gk~~t 138 (193)
T 3kyp_A 124 VECTRIKWKEGKNPI 138 (193)
T ss_dssp CCCCCCCCCSSCCCC
T ss_pred eccceeeeecCCCcc
Confidence 467999999997753
No 283
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=31.40 E-value=83 Score=20.63 Aligned_cols=55 Identities=11% Similarity=-0.016 Sum_probs=31.3
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEE
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~ 100 (145)
+..-+++.+++.+...++.+++++.+ . +++..+... . .| +..|+.||+|.+....
T Consensus 86 ~~~hl~f~v~d~~dv~~~~~~l~~~G------~-----~~~~~~~~~-------~---~g---~~~~~~DPdG~~iel~ 140 (144)
T 2kjz_A 86 GGGELAFRVENDAQVDETFAGWKASG------V-----AMLQQPAKM-------E---FG---YTFTAADPDSHRLRVY 140 (144)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTT------C-----CCCSCCEEE-------T---TE---EEEEECCTTCCEEEEE
T ss_pred CceEEEEEeCCHHHHHHHHHHHHHCC------C-----eEecCceec-------C---Cc---eEEEEECCCCCEEEEE
Confidence 44566777776666666666655543 2 222211100 0 01 5779999999987654
No 284
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=31.08 E-value=36 Score=20.16 Aligned_cols=16 Identities=13% Similarity=0.063 Sum_probs=13.1
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|++|+|.+..-
T Consensus 25 ~i~~~d~~g~i~~~N~ 40 (118)
T 3olo_A 25 ASFCLGDNWQFLYVND 40 (118)
T ss_dssp EEEEECTTSBEEEECH
T ss_pred eEEEECCCCcEEEEHH
Confidence 5689999999987643
No 285
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=30.33 E-value=53 Score=24.10 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=26.9
Q ss_pred HHHHH-hCCCccCCCCcceEEEEECCCCcEEEEEeecCC----CCCCHHHHHHHHHhcc
Q psy17183 68 AISKT-YGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQ----VGRNLKEILRQVEAFQ 121 (145)
Q Consensus 68 ~va~~-yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~----~~~~~~ell~~i~~l~ 121 (145)
+.++. +|+. ..|+.||++.+|+.. .|..+ ...+.+++.++|+++.
T Consensus 161 ~~a~~~~GV~------GtPtfvv~~~nG~~~---~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 161 SLAINKLGIT------AVPIFFIKLNDDKSY---IEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHHHCCC------SSCEEEEEECCTTCC---CCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCC------cCCEEEEEcCCCEEe---eCCCCcccccccCHHHHHHHHHHHH
Confidence 34555 6665 369999888888742 23321 1234677777776553
No 286
>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*
Probab=29.97 E-value=1.7e+02 Score=21.67 Aligned_cols=60 Identities=8% Similarity=-0.070 Sum_probs=37.1
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
++.-+++.+++.+...++.+++++.+ + .+. ..+... .. + ..+..|+.||+|.......
T Consensus 65 ~~~h~a~~v~~~~dl~~~~~~l~~~G------~---~~~--~~~~~~------~~----~-~~~~~~f~DPdG~~iel~~ 122 (309)
T 3hpy_A 65 GIDFFGFKVLDKATLEKLDADLQAYG------L---TTT--RIPAGE------ML----E-TGERVRFELPSGHLIELYA 122 (309)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHHHHT------C---CCE--EECTTS------ST----T-BCCEEEEECTTSCEEEEES
T ss_pred ceeEEEEEECCHHHHHHHHHHHHhCC------C---cee--eccCCc------cC----C-CeeEEEEECCCCCEEEEEE
Confidence 44567777777777888877776654 4 332 211110 01 1 2468899999999887766
Q ss_pred ec
Q psy17183 102 SD 103 (145)
Q Consensus 102 ~~ 103 (145)
..
T Consensus 123 ~~ 124 (309)
T 3hpy_A 123 EK 124 (309)
T ss_dssp CB
T ss_pred cc
Confidence 44
No 287
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=29.89 E-value=73 Score=26.23 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=32.1
Q ss_pred ecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 63 SDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 63 sD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
.|...+++..||+. +.|+.|| +|+.+.. |. .+.+++++.++...
T Consensus 156 ~~~~~~~~~~~~i~------svPt~~i---~g~~~~~--G~----~~~~~l~~~l~~~~ 199 (521)
T 1hyu_A 156 GGTFQNEITERNVM------GVPAVFV---NGKEFGQ--GR----MTLTEIVAKVDTGA 199 (521)
T ss_dssp TTTCHHHHHHTTCC------SSSEEEE---TTEEEEE--SC----CCHHHHHHHHCCSS
T ss_pred chhhHHHHHHhCCC------ccCEEEE---CCEEEec--CC----CCHHHHHHHHhhcc
Confidence 35678899999987 4799877 8877643 43 34688888887763
No 288
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=29.87 E-value=39 Score=20.71 Aligned_cols=16 Identities=25% Similarity=0.156 Sum_probs=13.6
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|.+|+|.+...
T Consensus 17 ~i~~~d~~g~i~~~N~ 32 (120)
T 2gj3_A 17 AISITDLKANILYANR 32 (120)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCCEEeehH
Confidence 6789999999998754
No 289
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=29.60 E-value=34 Score=20.59 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=13.3
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|.+|+|.+..-
T Consensus 31 ~i~~~d~~g~i~~~N~ 46 (125)
T 3fc7_A 31 GIVHLTTNGTILSVNP 46 (125)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEEcCCCeEEEECH
Confidence 5789999999987754
No 290
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=29.32 E-value=33 Score=22.46 Aligned_cols=18 Identities=28% Similarity=0.602 Sum_probs=14.5
Q ss_pred eEEEEECCCCcEEEEEee
Q psy17183 85 RAYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~~ 102 (145)
=+.+++|.+|+|.+....
T Consensus 18 d~i~~~D~~g~I~~~N~a 35 (129)
T 3mfx_A 18 EAMILVNANGFIRSCNQR 35 (129)
T ss_dssp SEEEEEETTSBEEEECHH
T ss_pred ceEEEECCCCEEEeEhHH
Confidence 367999999999987653
No 291
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=29.10 E-value=43 Score=23.77 Aligned_cols=43 Identities=9% Similarity=0.166 Sum_probs=24.3
Q ss_pred HHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 68 AISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 68 ~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.++.+|+. | .|+ |+|+.+|+.+....|. .+.+++++.|+.+-
T Consensus 160 ~~a~~~gv~----g--~Pt-~~v~~~~~~~~~~~g~----~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 160 SLAKSLGVN----S--YPS-LVLQINDAYFPIEVDY----LSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHTTCC----S--SSE-EEEEETTEEEEECCCS----SCSHHHHHHHHHHH
T ss_pred HHHHHcCCC----c--ccE-EEEEECCEEEEeeCCC----CCHHHHHHHHHHHH
Confidence 444555655 3 465 4566677765444443 23577777776653
No 292
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=28.88 E-value=1.4e+02 Score=20.21 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=37.7
Q ss_pred hHHHHHhCCCccCCCCcceEEEEECC-CCcEEEEEeecCCCCCCHHHHHHHHHhccccccC----CcccCCCCCCC
Q psy17183 67 HAISKTYGCYLSSAGHSLRAYYIIDK-RGYLRSMNVSDIQVGRNLKEILRQVEAFQLVDST----DTQCPVNWTTG 137 (145)
Q Consensus 67 ~~va~~yg~~~~~~g~~~p~tfIID~-dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~~~----~~~~p~~w~~~ 137 (145)
+.++..||+... ..|+..|++. ...-.|... ...-+.+.|.+.++.+....-+ ++-.|.+|.+|
T Consensus 78 ~~~l~~fGl~~~----~~P~v~i~~~~~~~~Ky~~~---~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 78 QRILEFFGLKKE----ECPAVRLITLEEEMTKYKPE---SEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp HHHHHHTTCCGG----GCSEEEEEECSSSCEEECCS---CCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC--
T ss_pred HHHHHHcCCCcc----cCCEEEEEecccccccCCCC---cccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCC
Confidence 357788898742 3699989875 222334321 1123467777777766654333 36689999765
No 293
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=28.84 E-value=1e+02 Score=23.19 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=31.8
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcE--EEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYL--RSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I--~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.++++.||+... ..|+.+++- |.+ ...+ ....+++.+++.+.|+..-
T Consensus 82 n~~la~~~~V~~~----~~PTl~~F~--G~~~~~~~y--~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 82 NKALGDRYKVDDK----NFPSIFLFK--GNADEYVQL--PSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp THHHHHHTTCCTT----SCCEEEEES--SSSSSEEEC--CTTSCCCHHHHHHHHHHHS
T ss_pred cHHHHHHhCCCcC----CCCeEEEEe--CCcCcceee--cccCCCCHHHHHHHHHHhh
Confidence 6789999998721 269999994 873 2222 0123467888998887653
No 294
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=28.36 E-value=37 Score=20.74 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=13.3
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+++|.+|+|.+...
T Consensus 5 ~i~~~d~~g~i~~~N~ 20 (119)
T 2vv6_A 5 AMIVIDGHGIIQLFST 20 (119)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCeEEEEhH
Confidence 5689999999987754
No 295
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=28.31 E-value=77 Score=21.81 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=29.9
Q ss_pred HHHHHhhhhhhhcCCcEEEEEeCCC---HHHHHHHHHHHhhcCCCCCCCCCCCCccEEecC
Q psy17183 8 DVLKLVRKEILIVSPFQIIAVSVDS---HLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDS 65 (145)
Q Consensus 8 ~~~~~~~~~~f~~~gv~vi~VS~D~---~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~ 65 (145)
...+.+ .+++++|+.|+-+|.-+ ......|.+. ++ + +|++++..
T Consensus 28 ~~~~al--~~l~~~G~~iii~TgR~~~~~~~~~~~l~~---~g------i---~~~~I~~n 74 (142)
T 2obb_A 28 FAVETL--KLLQQEKHRLILWSVREGELLDEAIEWCRA---RG------L---EFYAANKD 74 (142)
T ss_dssp THHHHH--HHHHHTTCEEEECCSCCHHHHHHHHHHHHT---TT------C---CCSEESSS
T ss_pred HHHHHH--HHHHHCCCEEEEEeCCCcccHHHHHHHHHH---cC------C---CeEEEEcC
Confidence 345555 47788999998888766 3445556553 66 7 88877764
No 296
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=28.26 E-value=59 Score=27.09 Aligned_cols=88 Identities=6% Similarity=0.024 Sum_probs=47.4
Q ss_pred CCcEEEEEeC---CC-HHHHHHHHHHHhhcCCCCCCCCCCCCccEE--ecC--chHHHHHhCCCccCCCCcceEEEEECC
Q psy17183 21 SPFQIIAVSV---DS-HLAHLAWTKTLTATSSNRSAIDPSKIVPLL--SDS--THAISKTYGCYLSSAGHSLRAYYIIDK 92 (145)
Q Consensus 21 ~gv~vi~VS~---D~-~~~~~~~~~~~~~~~~~~~~~~~~~~fpll--sD~--~~~va~~yg~~~~~~g~~~p~tfIID~ 92 (145)
-.+.|+ ++. +. .+...+..+.+++.+ +.+. .|. +.++.++|.-.. ..| .|..+||++
T Consensus 349 ~qV~Ii-i~~~~~e~~~~~A~~L~~~Lr~~G-----------IrV~~d~Ddr~~~siGkK~r~Ad-~iG--iPy~IiVG~ 413 (459)
T 3ikl_A 349 IKVALD-VGRGPTLELRQVCQGLFNELLENG-----------ISVWPGYLETMQSSLEQLYSKYD-EMS--ILFTVLVTE 413 (459)
T ss_dssp CCEEEE-ESSCCSTTHHHHHHHHHHHHHHTS-----------CCEECGGGSSSCCTTHHHHHHHG-GGT--CSEEEEECT
T ss_pred ceEEEE-eCCCCCHHHHHHHHHHHHHHHHCC-----------CeEEEeecCCcCCCHHHHHHHHH-HcC--CCEEEEECc
Confidence 345666 664 22 223344455555443 4444 565 467777764221 124 699999996
Q ss_pred C----CcEEEEEeecCC-CCCCHHHHHHHHHhcccc
Q psy17183 93 R----GYLRSMNVSDIQ-VGRNLKEILRQVEAFQLV 123 (145)
Q Consensus 93 d----G~I~~~~~~~~~-~~~~~~ell~~i~~l~~~ 123 (145)
+ |.|......... ..-+.+++.+.|+.+-..
T Consensus 414 kEle~g~VtVR~Rdtgeq~~v~ldeli~~l~~~i~~ 449 (459)
T 3ikl_A 414 TTLENGLIHLRSRDTTMKEMMHISKLKDFLIKYISS 449 (459)
T ss_dssp TSTTSSEEEEEETTTCCCCCEETTHHHHHHHHHHHH
T ss_pred hhhhCCEEEEEECCCCceEEEEHHHHHHHHHHHHhh
Confidence 5 777666554322 122456777666555433
No 297
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=27.72 E-value=40 Score=20.39 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.6
Q ss_pred EEEEECCC-CcEEEEEe
Q psy17183 86 AYYIIDKR-GYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~d-G~I~~~~~ 101 (145)
+.+++|++ |+|.+...
T Consensus 10 ~i~~~d~~~g~I~~~N~ 26 (114)
T 1ll8_A 10 AIFTVDAKTTEILVAND 26 (114)
T ss_dssp EEEEEETTTCBEEEECT
T ss_pred eEEEEECCCCeEEEehH
Confidence 68999999 99998754
No 298
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=27.72 E-value=44 Score=20.60 Aligned_cols=16 Identities=25% Similarity=0.467 Sum_probs=13.1
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..|++|++|+|.+..-
T Consensus 23 ~i~~~d~~g~i~~vN~ 38 (117)
T 2r78_A 23 GIFIMDAEGHYLDVNP 38 (117)
T ss_dssp EEEEECTTSBEEEECH
T ss_pred eEEEECCCCCEEEecH
Confidence 5689999999987653
No 299
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=27.04 E-value=1.3e+02 Score=21.57 Aligned_cols=32 Identities=6% Similarity=-0.084 Sum_probs=24.3
Q ss_pred HHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHH
Q psy17183 9 VLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKT 42 (145)
Q Consensus 9 ~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~ 42 (145)
..+.+ .+++++|+.++-+|-.+....+.+.+.
T Consensus 27 ~~~~l--~~l~~~g~~~~i~TGr~~~~~~~~~~~ 58 (227)
T 1l6r_A 27 AIESI--RSAEKKGLTVSLLSGNVIPVVYALKIF 58 (227)
T ss_dssp HHHHH--HHHHHTTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHH--HHHHHCCCEEEEECCCCcHHHHHHHHH
Confidence 44455 367788999988888888888877765
No 300
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=26.72 E-value=46 Score=21.68 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=26.6
Q ss_pred EEEEECCCCcEEEEEeecCC-CCCCHHHHHHHHHhccccccC
Q psy17183 86 AYYIIDKRGYLRSMNVSDIQ-VGRNLKEILRQVEAFQLVDST 126 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~~~~~-~~~~~~ell~~i~~l~~~~~~ 126 (145)
+.++.+++|.+.....+... ...+..|+...+.+|+....+
T Consensus 22 G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~ 63 (140)
T 3u3g_D 22 GVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMF 63 (140)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGG
T ss_pred EEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHc
Confidence 56778889987644433321 223578999988888875543
No 301
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=26.32 E-value=57 Score=22.49 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=16.9
Q ss_pred ceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhccccc
Q psy17183 84 LRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQLVD 124 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~~~~ 124 (145)
.|+.|| +|+.. .|. .+.+++.+.|+.+...+
T Consensus 150 tPt~vv---nG~~~---~G~----~~~~~l~~~i~~~~~~~ 180 (186)
T 3bci_A 150 TPTAFI---NGEKV---EDP----YDYESYEKLLKDKIKLE 180 (186)
T ss_dssp SSEEEE---TTEEC---SCT----TCHHHHHHHHHC-----
T ss_pred CCeEEE---CCEEc---CCC----CCHHHHHHHHHHHHHhh
Confidence 688666 67532 232 35788888888776444
No 302
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=25.89 E-value=41 Score=22.90 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=14.9
Q ss_pred EEEEECCCCcEEEEEee
Q psy17183 86 AYYIIDKRGYLRSMNVS 102 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~~ 102 (145)
..+++|++|+|+|....
T Consensus 31 gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 31 EITFVNKDDIFQYYNDS 47 (151)
T ss_dssp EEEEEETTSBEEEECCC
T ss_pred ceEEEcCCCeEEEEeCC
Confidence 57999999999998766
No 303
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=25.69 E-value=1.3e+02 Score=24.24 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=16.7
Q ss_pred eEEEEECCCCcEEEEEeecC
Q psy17183 85 RAYYIIDKRGYLRSMNVSDI 104 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~~~~ 104 (145)
.+.||+|.+|+++....+..
T Consensus 3 ~~i~I~~~~Gk~~l~k~y~~ 22 (435)
T 2vgl_M 3 GGLFIYNHKGEVLISRVYRD 22 (435)
T ss_dssp CEEEEECTTCCEEEEEECSS
T ss_pred EEEEEECCCCCEEEEEecCC
Confidence 57899999999998877653
No 304
>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*
Probab=25.13 E-value=2e+02 Score=21.00 Aligned_cols=61 Identities=7% Similarity=-0.120 Sum_probs=36.8
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
++.-+++.+++.+...++.+++++.+ + . +...+. ......+. .+..|+.||+|.......
T Consensus 60 ~~~~~~~~v~~~~dl~~~~~~l~~~G------~---~--~~~~~~-~~~~~~~~--------~~~~~~~DPdG~~iel~~ 119 (300)
T 2zyq_A 60 RLLEAGWECANAEGLQEIRNRLDLEG------T---P--YKEATA-AELADRRV--------DEMIRFADPSGNCLEVFH 119 (300)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHT------C---C--CEECCH-HHHHHHTC--------SEEEEEECTTCCEEEEEE
T ss_pred CcceEEEEeCCHHHHHHHHHHHHHcC------C---e--EEeCCh-hhcccccc--------eEEEEEECCCCCEEEEEE
Confidence 34457777877777778777776654 4 3 222221 11111121 367789999998887765
Q ss_pred e
Q psy17183 102 S 102 (145)
Q Consensus 102 ~ 102 (145)
.
T Consensus 120 ~ 120 (300)
T 2zyq_A 120 G 120 (300)
T ss_dssp C
T ss_pred c
Confidence 4
No 305
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=25.04 E-value=43 Score=22.92 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.8
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+|+|++|+|++...
T Consensus 34 gi~v~D~~g~I~~~N~ 49 (152)
T 3mxq_A 34 ALCIVRNDYVIVKVNE 49 (152)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred CEEEEcCCCEEEEECH
Confidence 6799999999998764
No 306
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=24.91 E-value=54 Score=19.90 Aligned_cols=16 Identities=19% Similarity=0.316 Sum_probs=13.0
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|++|+|.+..-
T Consensus 29 ~i~~~d~~g~i~~~N~ 44 (126)
T 3bwl_A 29 MIDVLDADGTICEVNQ 44 (126)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred EEEEEcCCCCEEEEcH
Confidence 4689999999987653
No 307
>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*
Probab=24.65 E-value=2e+02 Score=20.88 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=37.2
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
++.-+++.+++.+...++.+++++.+ + + +...+.. .....+. .+..++.||+|.......
T Consensus 58 ~~~~~~f~v~~~~dl~~~~~~l~~~G------~---~--~~~~~~~-~~~~~~~--------~~~~~~~DPdG~~iel~~ 117 (292)
T 1kw3_B 58 DLAYAGLEVDDAAALERMADKLRQAG------V---A--FTRGDEA-LMQQRKV--------MGLLCLQDPFGLPLEIYY 117 (292)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHT------C---C--CEECCHH-HHHHHTC--------SEEEEEECTTSCEEEEEE
T ss_pred CccEEEEEECCHHHHHHHHHHHHHcC------C---e--EeecCcc-cccccCc--------eEEEEEECCCCCEEEEEE
Confidence 44567788887777788877776654 3 3 3322221 1111221 367789999998887765
Q ss_pred e
Q psy17183 102 S 102 (145)
Q Consensus 102 ~ 102 (145)
.
T Consensus 118 ~ 118 (292)
T 1kw3_B 118 G 118 (292)
T ss_dssp C
T ss_pred C
Confidence 4
No 308
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=24.26 E-value=43 Score=25.03 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=29.7
Q ss_pred cceEEEEECCCCcEEEEEeec---C-CCCCCHHHHHHHHHhcc
Q psy17183 83 SLRAYYIIDKRGYLRSMNVSD---I-QVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 83 ~~p~tfIID~dG~I~~~~~~~---~-~~~~~~~ell~~i~~l~ 121 (145)
.-|..+++|++|.+...+.|. . |...+.++.++..+++-
T Consensus 105 L~P~NL~f~~~~~p~i~~RGik~~l~P~~~~ee~fL~qyKAli 147 (215)
T 4ann_A 105 LAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALV 147 (215)
T ss_dssp CSGGGEEECTTSCEEESCCEETTTBSCCCCCHHHHHHHHHHHH
T ss_pred EecceEEEcCCCCEEEEEccCccCCCCCCCCHHHHHHHHHHHH
Confidence 468899999999998888873 2 33447788888877764
No 309
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=23.92 E-value=75 Score=22.22 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=20.7
Q ss_pred HHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhc
Q psy17183 69 ISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAF 120 (145)
Q Consensus 69 va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l 120 (145)
.++.+|+. | .|+.+| +|+.+-...|. .+.+++.+.|+.|
T Consensus 144 ~a~~~gv~----G--tPtfvv---ng~~~v~~~Ga----~~~e~~~~~i~~l 182 (185)
T 3feu_A 144 LSEKSGIS----S--VPTFVV---NGKYNVLIGGH----DDPKQIADTIRYL 182 (185)
T ss_dssp HHHHHTCC----S--SSEEEE---TTTEEECGGGC----SSHHHHHHHHHHH
T ss_pred HHHHcCCC----c--cCEEEE---CCEEEEecCCC----CCHHHHHHHHHHH
Confidence 34455554 3 577665 56543111232 3467777777765
No 310
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=23.90 E-value=49 Score=20.56 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=13.3
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
+.+++|++|+|.+...
T Consensus 28 ~i~~~d~~g~i~~~N~ 43 (130)
T 1d06_A 28 ATVVSATDGTIVSFNA 43 (130)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCeEEEEcH
Confidence 5789999999987654
No 311
>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A
Probab=23.65 E-value=2.2e+02 Score=20.93 Aligned_cols=61 Identities=10% Similarity=-0.034 Sum_probs=35.2
Q ss_pred CcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCchHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEe
Q psy17183 22 PFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDSTHAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 22 gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~ 101 (145)
++.-+++.+++.+...++.+++++.+ + + +...+. ......+. .+..|+.||+|.......
T Consensus 64 ~~~~~~~~v~~~~dl~~~~~~l~~~G------~---~--~~~~~~-~~~~~~~~--------~~~~~~~DPdG~~iel~~ 123 (302)
T 2ehz_A 64 DLEYLGWRVAGKPEFEALGQKLIDAG------Y---K--IRICDK-VEAQERMV--------LGLMKTEDPGGNPTEIFW 123 (302)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTT------C---C--CEECCH-HHHHHHTE--------EEEEEEECTTSCEEEEEE
T ss_pred CeeEEEEEECCHHHHHHHHHHHHHCC------C---c--EEECCc-cccccccc--------eEEEEEECCCCCEEEEEE
Confidence 34456666666667777777765554 3 2 333222 11111111 367899999999887765
Q ss_pred e
Q psy17183 102 S 102 (145)
Q Consensus 102 ~ 102 (145)
.
T Consensus 124 ~ 124 (302)
T 2ehz_A 124 G 124 (302)
T ss_dssp E
T ss_pred C
Confidence 4
No 312
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=23.26 E-value=1.6e+02 Score=19.01 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=13.6
Q ss_pred ceEEEEECCCCcEEEEE
Q psy17183 84 LRAYYIIDKRGYLRSMN 100 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~ 100 (145)
.+..|+.||+|.+....
T Consensus 123 ~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 123 AVSLYFADPNGHALEFT 139 (141)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 37889999999987653
No 313
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=23.02 E-value=1.7e+02 Score=19.41 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=28.4
Q ss_pred hcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCc
Q psy17183 19 IVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDST 66 (145)
Q Consensus 19 ~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~ 66 (145)
...|...|.+-.++.+...+..+++++.+ + ++-++.|..
T Consensus 50 ~~~g~~KiVlk~~~e~el~~l~~~a~~~g------l---~~~~i~DAG 88 (120)
T 1xty_A 50 LHQGQPKIIVKVNSLDEIISRAKKAETMN------L---PFSIIEDAG 88 (120)
T ss_dssp HHTTCCEEEEEESSHHHHHHHHHHHHHTT------C---CEEEEECCS
T ss_pred HHCCCcEEEEecCCHHHHHHHHHHHHHCC------C---CEEEEEcCC
Confidence 45677788887777777777766655555 7 788888884
No 314
>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0
Probab=22.81 E-value=1.2e+02 Score=19.35 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=16.4
Q ss_pred ceEEEEECCCCcEEEEEeecC
Q psy17183 84 LRAYYIIDKRGYLRSMNVSDI 104 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~~~~~ 104 (145)
.+..|+.||+|.+........
T Consensus 106 ~~~~~~~DPdG~~iel~~~~~ 126 (134)
T 3fcd_A 106 QREFQVRMPDGDWLNFTAPLA 126 (134)
T ss_dssp EEEEEEECTTSCEEEEEEECC
T ss_pred cEEEEEECCCCCEEEEEEccc
Confidence 478899999999887765543
No 315
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=22.77 E-value=57 Score=18.90 Aligned_cols=16 Identities=13% Similarity=0.119 Sum_probs=13.2
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|.+|+|.+..-
T Consensus 15 ~i~~~d~~g~i~~~N~ 30 (114)
T 3luq_A 15 ALAMFDREMRYLAVSR 30 (114)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEEcCCcEEEEECH
Confidence 5789999999997654
No 316
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=22.30 E-value=91 Score=24.16 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=25.2
Q ss_pred chHHHHHhCCCccCCCCcceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHH
Q psy17183 66 THAISKTYGCYLSSAGHSLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVE 118 (145)
Q Consensus 66 ~~~va~~yg~~~~~~g~~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~ 118 (145)
+.+++++||+. ..|+.|+ +|+. +.|. ++.+++.+.+.
T Consensus 240 ~~~la~~~gI~------~vPT~~i---~G~~---~~G~----~~~~~L~~~l~ 276 (291)
T 3kp9_A 240 QAQECTEAGIT------SYPTWII---NGRT---YTGV----RSLEALAVASG 276 (291)
T ss_dssp CCHHHHTTTCC------STTEEEE---TTEE---EESC----CCHHHHHHHTC
T ss_pred HHHHHHHcCCc------ccCeEEE---CCEE---ecCC----CCHHHHHHHHC
Confidence 68999999998 4788554 6753 4444 45677776653
No 317
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=21.95 E-value=51 Score=22.36 Aligned_cols=29 Identities=21% Similarity=0.357 Sum_probs=19.3
Q ss_pred EEEEECCCCcEEEEEeecC-CCCCCHHHHH
Q psy17183 86 AYYIIDKRGYLRSMNVSDI-QVGRNLKEIL 114 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~~~~-~~~~~~~ell 114 (145)
+.+++|++|+|.+-..... -.|.+.++++
T Consensus 29 Gii~lD~~g~I~~~N~~~e~~sG~~~~evi 58 (125)
T 1nwz_A 29 GAIQLDGDGNILQYNAAEGDITGRDPKQVI 58 (125)
T ss_dssp EEEEEETTCBEEEECHHHHHHHCCCHHHHT
T ss_pred eEEEECCCCEEEEEHHHHHHHhCCCHHHHc
Confidence 6799999999987654332 2344555554
No 318
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=21.94 E-value=58 Score=19.36 Aligned_cols=16 Identities=31% Similarity=0.411 Sum_probs=13.1
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|.+|+|.+..-
T Consensus 11 ~i~~~d~~g~i~~~N~ 26 (126)
T 3mjq_A 11 MILIINREGRLLYANT 26 (126)
T ss_dssp EEEEEETTSBEEEECT
T ss_pred eEEEEeCCCcEEEEcH
Confidence 5689999999987653
No 319
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=21.72 E-value=59 Score=25.49 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=28.1
Q ss_pred HHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHH
Q psy17183 7 CDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKT 42 (145)
Q Consensus 7 ~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~ 42 (145)
+..++++ +.++++|+.|+.||....+..+.|++.
T Consensus 146 ~~~~~l~--~~l~~~G~~v~ivSas~~~~v~~~a~~ 179 (327)
T 4as2_A 146 SGQRELY--NKLMENGIEVYVISAAHEELVRMVAAD 179 (327)
T ss_dssp HHHHHHH--HHHHHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred HHHHHHH--HHHHHCCCEEEEEeCCcHHHHHHHHhh
Confidence 4456677 578899999999999888889998875
No 320
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.64 E-value=79 Score=22.57 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=32.4
Q ss_pred HHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCc
Q psy17183 8 DVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDST 66 (145)
Q Consensus 8 ~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~ 66 (145)
+.+++. +++.+.+-.||||..-+.+....|.+. + +|-++.|.+
T Consensus 105 ~v~~li--~ki~~~~~kiiGvCFms~F~kagW~~~-----------I---dFD~iID~~ 147 (157)
T 2r47_A 105 DVKKLV--EDALEEGGELMGLCYMDMFARAGWYEL-----------L---DFDCVINAD 147 (157)
T ss_dssp HHHHHH--HHHEEEEEEEEEEEETTHHHHTTHHHH-----------S---CCSEEEEEE
T ss_pred HHHHHH--HHhhcCCCCEEEEEhHHHHHHcCCCcc-----------C---CccEEEEcc
Confidence 344444 344344667999999999999999986 7 899998864
No 321
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=21.63 E-value=71 Score=25.58 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=29.0
Q ss_pred HHHHHHHhhhhhhhcCCcEEEEEeCCCHHHHHHHHHH
Q psy17183 6 ACDVLKLVRKEILIVSPFQIIAVSVDSHLAHLAWTKT 42 (145)
Q Consensus 6 ~~~~~~~~~~~~f~~~gv~vi~VS~D~~~~~~~~~~~ 42 (145)
.|...+++ +.++++|+.|+-||....+..+.|++.
T Consensus 223 ~p~~~eLi--~~L~~~G~~v~IVSgg~~~~v~~ia~~ 257 (385)
T 4gxt_A 223 LDEMVDLY--RSLEENGIDCYIVSASFIDIVRAFATD 257 (385)
T ss_dssp CHHHHHHH--HHHHHTTCEEEEEEEEEHHHHHHHHHC
T ss_pred CHHHHHHH--HHHHHCCCeEEEEcCCcHHHHHHHHHH
Confidence 35667777 588999999999999888888888875
No 322
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=21.55 E-value=1.6e+02 Score=18.40 Aligned_cols=29 Identities=7% Similarity=0.088 Sum_probs=16.4
Q ss_pred cceEEEEECCCCcEEEEEeecCCCCCCHHHHHHHHHhcc
Q psy17183 83 SLRAYYIIDKRGYLRSMNVSDIQVGRNLKEILRQVEAFQ 121 (145)
Q Consensus 83 ~~p~tfIID~dG~I~~~~~~~~~~~~~~~ell~~i~~l~ 121 (145)
+.|.+|| .||.+. +++ +.+++.++|.++.
T Consensus 55 tVP~I~i--~Dg~~l---~~~-----~~~el~~~L~el~ 83 (92)
T 2lqo_A 55 TVPTVKF--ADGSTL---TNP-----SADEVKAKLVKIA 83 (92)
T ss_dssp CSCEEEE--TTSCEE---ESC-----CHHHHHHHHHHHH
T ss_pred EeCEEEE--eCCEEE---eCC-----CHHHHHHHHHHhc
Confidence 5788776 466653 333 3466655555444
No 323
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=21.49 E-value=34 Score=27.38 Aligned_cols=33 Identities=12% Similarity=0.310 Sum_probs=26.9
Q ss_pred EEEECCCCcEEEEEeecCCC-CCCHHHHHHHHHh
Q psy17183 87 YYIIDKRGYLRSMNVSDIQV-GRNLKEILRQVEA 119 (145)
Q Consensus 87 tfIID~dG~I~~~~~~~~~~-~~~~~ell~~i~~ 119 (145)
.|.||+||+|.+=.+|.... |...+|+.+.|++
T Consensus 97 ~~~V~~dG~I~~P~iG~v~vaG~T~~e~~~~I~~ 130 (359)
T 2j58_A 97 GNWVNSDGTIFYPYIGKVQVAGKTVSQVRQDITS 130 (359)
T ss_dssp SEECCTTSEEEETTTEEEECTTCCHHHHHHHHHH
T ss_pred CcEECCCCeEEecccceEEECCCCHHHHHHHHHH
Confidence 48899999999888888654 7888998887754
No 324
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.46 E-value=53 Score=23.77 Aligned_cols=17 Identities=24% Similarity=0.100 Sum_probs=14.0
Q ss_pred eEEEEECCCCcEEEEEe
Q psy17183 85 RAYYIIDKRGYLRSMNV 101 (145)
Q Consensus 85 p~tfIID~dG~I~~~~~ 101 (145)
=.++++|++|+|.|...
T Consensus 33 ~~vii~D~~g~I~~~N~ 49 (233)
T 3vol_A 33 ANVMIADNDLNIIYMNR 49 (233)
T ss_dssp SEEEEEETTSBEEEECH
T ss_pred CcEEEECCCCcEEEecH
Confidence 36799999999998753
No 325
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=21.20 E-value=65 Score=18.52 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=13.2
Q ss_pred EEEEECCCCcEEEEEe
Q psy17183 86 AYYIIDKRGYLRSMNV 101 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~ 101 (145)
..+++|++|+|.+..-
T Consensus 19 ~i~~~d~~~~i~~~N~ 34 (124)
T 3lyx_A 19 AIVVTDLQGFIIDWNK 34 (124)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEECCCCcEeehhh
Confidence 5789999999987653
No 326
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=20.33 E-value=1.7e+02 Score=19.74 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=29.4
Q ss_pred hhcCCcEEEEEeCCCHHHHHHHHHHHhhcCCCCCCCCCCCCccEEecCc
Q psy17183 18 LIVSPFQIIAVSVDSHLAHLAWTKTLTATSSNRSAIDPSKIVPLLSDST 66 (145)
Q Consensus 18 f~~~gv~vi~VS~D~~~~~~~~~~~~~~~~~~~~~~~~~~~fpllsD~~ 66 (145)
....|..-|++-.++.+...+..+++++.+ + ++.++.|..
T Consensus 43 W~~~G~~Kvvlk~~~e~el~~L~~~a~~~g------l---~~~~I~DAG 82 (123)
T 1rzw_A 43 WLDEGQKKVVLKVKSLEELLGIKHKAESLG------L---VTGLVQDAG 82 (123)
T ss_dssp TGGGCSSEEEEECSCHHHHHHHHHHHHHTT------C---CEEEECCTT
T ss_pred HHHCCCcEEEEecCCHHHHHHHHHHHHHCC------C---CEEEEECCC
Confidence 345688788888888777777777655555 7 788888875
No 327
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=20.29 E-value=58 Score=22.30 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=19.4
Q ss_pred EEEEECCCCcEEEEEeecC-CCCCCHHHHH
Q psy17183 86 AYYIIDKRGYLRSMNVSDI-QVGRNLKEIL 114 (145)
Q Consensus 86 ~tfIID~dG~I~~~~~~~~-~~~~~~~ell 114 (145)
+.+++|++|+|.+-..... -.|.+.++++
T Consensus 34 GiivlD~dg~I~~~N~~~e~isG~s~eevi 63 (129)
T 1mzu_A 34 GAIQVDGSGVIHRYNRTESRLSGRIPERVI 63 (129)
T ss_dssp EEEEEETTCBEEEECHHHHHHHCCCHHHHT
T ss_pred eEEEECCCCeEEEEHHHHHHHhCCCHHHHc
Confidence 6799999999987654332 2344555554
No 328
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=20.25 E-value=1.5e+02 Score=17.79 Aligned_cols=15 Identities=13% Similarity=0.445 Sum_probs=12.4
Q ss_pred eEEEEECCCCcEEEE
Q psy17183 85 RAYYIIDKRGYLRSM 99 (145)
Q Consensus 85 p~tfIID~dG~I~~~ 99 (145)
+..|+.||+|.+...
T Consensus 97 ~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 97 YTFYVEAPGGFTIEV 111 (113)
T ss_dssp EEEEEEETTTEEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 678999999988654
No 329
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=20.13 E-value=2.8e+02 Score=21.86 Aligned_cols=23 Identities=9% Similarity=0.189 Sum_probs=18.6
Q ss_pred ceEEEEECCCCcEEEEEeecCCC
Q psy17183 84 LRAYYIIDKRGYLRSMNVSDIQV 106 (145)
Q Consensus 84 ~p~tfIID~dG~I~~~~~~~~~~ 106 (145)
.+.-|++|++|++....++..+.
T Consensus 320 ~~vDf~~~~~g~~~vlEINtrPG 342 (383)
T 3k3p_A 320 SRCDFFLTEDGKVYLNELNTMPG 342 (383)
T ss_dssp EEEEEEECTTCCEEEEEEESSCC
T ss_pred EEEEEEEECCCCEEEEEeeCCCC
Confidence 57889999999988888876543
Done!