Query psy17184
Match_columns 218
No_of_seqs 232 out of 1302
Neff 7.5
Searched_HMMs 29240
Date Sat Aug 17 00:01:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rr8_A Iqgap1 protein; F-actin 100.0 2.5E-42 8.5E-47 281.6 4.3 157 1-202 9-183 (190)
2 1p5s_A RAS GTPase-activating-l 100.0 2E-37 6.9E-42 254.8 9.1 144 2-207 38-196 (203)
3 1wyn_A Calponin-2; CH domain, 100.0 1.2E-37 4.2E-42 244.1 6.2 124 2-179 1-124 (146)
4 1wym_A Transgelin-2; CH domain 100.0 4.5E-37 1.5E-41 243.2 7.1 128 2-178 1-132 (155)
5 1wyp_A Calponin 1; CH domain, 100.0 1.4E-36 4.7E-41 235.5 6.3 123 2-178 1-123 (136)
6 3i6x_A P195, RAS GTPase-activa 100.0 9.1E-35 3.1E-39 237.1 11.6 141 2-187 32-187 (193)
7 1p2x_A RNG2 protein, RAS GTPas 100.0 1.8E-34 6.3E-39 229.1 10.7 127 71-197 12-155 (159)
8 1h67_A Calponin alpha; cytoske 100.0 1.2E-31 4.2E-36 200.0 8.8 104 70-175 3-106 (108)
9 1ujo_A Transgelin; CH domain, 100.0 3.1E-31 1.1E-35 207.3 11.4 114 65-178 4-125 (144)
10 2l3g_A RHO guanine nucleotide 99.9 2.2E-27 7.5E-32 181.3 9.3 104 70-176 12-123 (126)
11 1wyr_A RHO guanine nucleotide 99.9 2.2E-27 7.5E-32 180.2 8.3 104 70-176 6-116 (121)
12 3ky9_A Proto-oncogene VAV; cal 99.8 4.2E-21 1.5E-25 179.9 9.6 106 70-175 5-123 (587)
13 1ujo_A Transgelin; CH domain, 99.8 1.2E-20 4E-25 147.3 8.0 92 12-103 3-108 (144)
14 1p2x_A RNG2 protein, RAS GTPas 99.8 6.2E-19 2.1E-23 139.6 12.0 134 9-144 3-152 (159)
15 1h67_A Calponin alpha; cytoske 99.8 2.8E-19 9.5E-24 133.0 5.7 86 17-104 2-93 (108)
16 2l3g_A RHO guanine nucleotide 99.6 4.2E-16 1.4E-20 118.7 7.7 88 17-107 11-112 (126)
17 1wyr_A RHO guanine nucleotide 99.6 2E-16 6.7E-21 119.8 4.8 88 16-106 4-104 (121)
18 2yrn_A Neuron navigator 2 isof 99.5 3.4E-14 1.2E-18 108.6 9.5 107 67-175 15-124 (129)
19 1aoa_A T-fimbrin; actin-bindin 99.5 3.6E-13 1.2E-17 115.2 14.3 162 2-167 8-269 (275)
20 1wku_A Alpha-actinin 3; calpon 99.3 9.4E-12 3.2E-16 105.2 11.9 156 10-170 19-240 (254)
21 1wym_A Transgelin-2; CH domain 99.3 1.2E-12 4E-17 103.0 5.3 34 69-102 79-114 (155)
22 1wyn_A Calponin-2; CH domain, 99.3 5.8E-13 2E-17 103.8 1.1 35 68-102 69-105 (146)
23 3ky9_A Proto-oncogene VAV; cal 99.3 5.3E-12 1.8E-16 118.2 7.6 88 18-105 5-111 (587)
24 1pxy_A Fimbrin-like protein; c 99.3 3.4E-11 1.1E-15 111.0 12.6 151 13-169 2-247 (506)
25 1rt8_A Fimbrin; filamentous ac 99.2 9.5E-11 3.2E-15 108.2 13.8 148 12-165 6-253 (513)
26 2wa7_A Filamin-B; disease muta 99.2 6.8E-11 2.3E-15 99.4 11.8 156 10-169 12-238 (245)
27 1wyp_A Calponin 1; CH domain, 99.2 6E-12 2E-16 96.9 4.0 37 67-103 68-106 (136)
28 1pxy_A Fimbrin-like protein; c 99.2 2.9E-11 1E-15 111.4 9.2 93 67-160 4-109 (506)
29 2qjz_A Microtubule-associated 99.2 4E-11 1.4E-15 90.5 8.2 81 72-158 7-90 (123)
30 1wyo_A Protein EB3, microtubul 99.2 4.2E-11 1.4E-15 93.9 7.7 86 68-159 20-108 (159)
31 1wku_A Alpha-actinin 3; calpon 99.2 3.3E-11 1.1E-15 101.9 7.2 107 67-175 24-130 (254)
32 1aoa_A T-fimbrin; actin-bindin 99.2 1.3E-10 4.6E-15 99.1 10.9 108 63-172 17-136 (275)
33 1sh5_A Plectin 1, PLTN, PCN; a 99.1 5.9E-10 2E-14 93.6 10.0 153 13-170 7-232 (245)
34 1rt8_A Fimbrin; filamentous ac 99.0 1.1E-09 3.6E-14 101.2 10.8 108 65-173 7-130 (513)
35 3f7p_A Plectin-1; plakin, hemi 99.0 4.6E-10 1.6E-14 96.8 7.8 152 10-166 65-283 (296)
36 2wa7_A Filamin-B; disease muta 99.0 1.1E-09 3.8E-14 92.0 8.4 107 66-174 16-124 (245)
37 1dxx_A Dystrophin; structural 99.0 1.8E-09 6.2E-14 90.7 8.7 153 11-167 9-231 (246)
38 2yrn_A Neuron navigator 2 isof 99.0 1.1E-09 3.7E-14 83.4 6.4 94 9-102 9-109 (129)
39 1wyo_A Protein EB3, microtubul 98.9 1.7E-09 5.8E-14 84.7 7.5 73 14-90 18-97 (159)
40 1dxx_A Dystrophin; structural 98.9 2E-09 6.7E-14 90.5 8.0 105 65-172 11-116 (246)
41 2qjz_A Microtubule-associated 98.9 2.5E-09 8.7E-14 80.6 7.5 67 20-90 7-80 (123)
42 2rr8_A Iqgap1 protein; F-actin 98.9 4.1E-10 1.4E-14 91.2 2.4 53 68-121 24-78 (190)
43 3i6x_A P195, RAS GTPase-activa 98.9 2.1E-09 7.3E-14 87.2 6.3 50 72-121 49-100 (193)
44 3hoc_A Filamin-A; calponin hom 98.9 1.9E-08 6.4E-13 85.8 11.8 153 11-168 40-264 (272)
45 1sh5_A Plectin 1, PLTN, PCN; a 98.9 8E-09 2.7E-13 86.6 9.2 104 68-174 10-118 (245)
46 1sjj_A Actinin; 3-helix bundle 98.8 5.5E-09 1.9E-13 101.2 8.9 154 12-170 2-221 (863)
47 3f7p_A Plectin-1; plakin, hemi 98.8 6.5E-09 2.2E-13 89.6 7.1 103 70-175 73-175 (296)
48 1sjj_A Actinin; 3-helix bundle 98.6 3.2E-08 1.1E-12 95.9 6.3 109 65-175 3-111 (863)
49 4b7l_A Filamin-B; structural p 98.4 1.7E-06 5.8E-11 76.0 11.9 145 21-170 20-236 (347)
50 3hoc_A Filamin-A; calponin hom 98.4 6.2E-07 2.1E-11 76.3 8.6 104 70-175 47-152 (272)
51 2vzc_A Alpha-parvin; membrane, 98.3 2.3E-06 8E-11 65.1 8.9 98 71-171 23-124 (131)
52 1p5s_A RAS GTPase-activating-l 98.2 1.1E-06 3.7E-11 71.8 5.2 44 70-113 55-98 (203)
53 4b7l_A Filamin-B; structural p 97.8 5.2E-05 1.8E-09 66.5 8.5 102 71-175 18-122 (347)
54 1wjo_A T-plastin; CH domain, a 97.7 6.7E-05 2.3E-09 56.4 5.7 85 72-158 9-99 (124)
55 2d89_A EHBP1 protein; all alph 97.4 0.00091 3.1E-08 49.7 9.3 94 72-170 11-108 (119)
56 1wyl_A NEDD9 interacting prote 97.4 0.00084 2.9E-08 49.7 8.7 94 72-170 9-105 (116)
57 2d87_A Smoothelin splice isofo 97.4 0.0012 4E-08 49.8 9.1 98 71-173 8-110 (128)
58 1bkr_A Spectrin beta chain; fi 97.2 0.0018 6.2E-08 47.3 8.4 90 72-166 5-97 (109)
59 1wyq_A Spectrin beta chain, br 97.1 0.0029 1E-07 47.5 8.5 91 72-167 9-102 (127)
60 1bhd_A Utrophin; calponin homo 97.0 0.0021 7.2E-08 47.6 7.3 93 71-170 9-107 (118)
61 2d88_A Protein mical-3; all al 97.0 0.0034 1.2E-07 46.7 8.0 93 73-170 12-109 (121)
62 2vzc_A Alpha-parvin; membrane, 96.5 0.006 2.1E-07 46.0 6.7 81 20-101 24-112 (131)
63 2r8u_A Microtubule-associated 96.4 0.011 3.7E-07 49.8 8.1 81 72-158 17-100 (268)
64 4abo_I MAL3, microtubule integ 95.8 0.029 1E-06 42.8 7.2 80 72-158 8-90 (145)
65 1wjo_A T-plastin; CH domain, a 95.6 0.0086 2.9E-07 44.8 3.5 69 20-89 9-88 (124)
66 2d89_A EHBP1 protein; all alph 95.3 0.027 9.4E-07 41.6 5.4 44 20-64 11-56 (119)
67 2qjx_A Protein BIM1; calponin 95.0 0.081 2.8E-06 39.6 7.1 80 72-158 12-94 (127)
68 2r8u_A Microtubule-associated 94.4 0.12 4.1E-06 43.4 7.4 41 20-64 17-57 (268)
69 1wyl_A NEDD9 interacting prote 94.3 0.07 2.4E-06 39.1 5.4 69 18-89 7-82 (116)
70 2d88_A Protein mical-3; all al 94.3 0.059 2E-06 39.9 4.9 69 20-89 11-84 (121)
71 2d87_A Smoothelin splice isofo 94.2 0.075 2.6E-06 39.7 5.4 45 19-64 8-54 (128)
72 1bkr_A Spectrin beta chain; fi 92.9 0.17 5.9E-06 36.6 5.2 45 19-64 4-50 (109)
73 1wyq_A Spectrin beta chain, br 92.7 0.19 6.6E-06 37.4 5.3 44 20-64 9-54 (127)
74 1bhd_A Utrophin; calponin homo 92.6 0.087 3E-06 38.8 3.4 45 19-64 9-55 (118)
75 4abo_I MAL3, microtubule integ 91.4 0.62 2.1E-05 35.5 6.9 40 20-64 8-47 (145)
76 2qjx_A Protein BIM1; calponin 91.3 0.76 2.6E-05 34.2 7.2 38 20-61 12-49 (127)
77 2ee7_A Sperm flagellar protein 81.6 4.1 0.00014 30.2 6.4 76 68-145 13-91 (127)
78 2ee7_A Sperm flagellar protein 71.6 4.7 0.00016 29.8 4.2 49 14-64 11-59 (127)
79 2cos_A Serine/threonine protei 69.3 1 3.6E-05 28.3 0.1 31 1-31 19-49 (54)
80 1wix_A HOOK homolog 1, RSGI RU 49.0 14 0.00047 28.4 3.3 45 16-63 7-51 (164)
81 1wgn_A UBAP1, ubiquitin associ 48.4 3.5 0.00012 26.6 -0.1 31 1-32 29-59 (63)
82 1sv0_A ETS DNA-binding protein 41.5 13 0.00044 25.4 1.9 36 71-107 14-50 (85)
83 2crn_A Ubash3A protein; compac 40.6 11 0.00037 24.3 1.3 32 1-32 19-50 (64)
84 2g3q_A Protein YBL047C; endocy 37.7 13 0.00043 21.6 1.2 27 1-28 14-40 (43)
85 1ify_A HHR23A, UV excision rep 37.6 20 0.00068 21.6 2.1 28 1-29 18-45 (49)
86 1rfz_A Hypothetical protein AP 36.7 51 0.0017 25.5 4.8 97 5-119 31-134 (168)
87 1z96_A DNA-damage, UBA-domain 34.8 23 0.00078 19.8 2.0 26 1-27 14-39 (40)
88 1wji_A Tudor domain containing 34.0 24 0.00083 22.5 2.2 30 1-31 19-48 (63)
89 1wix_A HOOK homolog 1, RSGI RU 33.9 67 0.0023 24.4 5.2 93 68-163 7-113 (164)
90 1vek_A UBP14, ubiquitin-specif 32.7 17 0.0006 24.6 1.4 32 1-32 39-70 (84)
91 1y9i_A Low temperature require 30.9 80 0.0027 24.6 5.1 97 5-119 29-132 (178)
92 2ekk_A UBA domain from E3 ubiq 30.6 15 0.00053 21.8 0.8 26 1-28 19-44 (47)
93 1sxd_A GA repeat binding prote 29.6 35 0.0012 23.5 2.6 36 71-107 27-63 (91)
94 2dag_A Ubiquitin carboxyl-term 29.1 15 0.00052 24.3 0.6 32 1-32 19-50 (74)
95 2cpw_A CBL-interacting protein 28.5 20 0.00069 22.9 1.1 29 1-29 29-57 (64)
96 1whc_A RSGI RUH-027, UBA/UBX 3 28.1 22 0.00077 22.7 1.3 31 1-32 19-50 (64)
97 1veg_A NEDD8 ultimate buster-1 27.2 32 0.0011 23.4 2.0 31 1-32 39-69 (83)
98 1ytr_A Bacteriocin plantaricin 26.5 17 0.00059 18.6 0.4 9 189-197 3-11 (26)
99 2dak_A Ubiquitin carboxyl-term 26.0 21 0.00072 22.6 0.8 31 1-32 19-49 (63)
100 1ji7_A ETS-related protein TEL 25.8 20 0.0007 24.6 0.8 36 71-107 16-52 (89)
101 1x66_A Friend leukemia integra 25.3 33 0.0011 24.0 1.8 37 71-108 28-66 (98)
102 1sv0_C Modulator of the activi 24.8 29 0.001 23.2 1.4 36 20-56 16-54 (82)
103 2h7b_A Core-binding factor, ML 23.6 45 0.0015 23.7 2.2 37 10-47 18-54 (105)
104 1vg5_A RSGI RUH-014, rhomboid 23.0 30 0.001 22.9 1.2 27 1-28 39-65 (73)
105 2qar_B Telsam domain; polymer, 22.8 33 0.0011 23.7 1.4 36 71-107 16-52 (93)
106 1dv0_A DNA repair protein HHR2 21.6 49 0.0017 19.7 1.8 27 1-28 14-40 (47)
107 2dai_A Ubadc1, ubiquitin assoc 21.6 35 0.0012 23.0 1.3 31 1-32 39-69 (83)
108 3zyl_A Phosphatidylinositol-bi 21.4 44 0.0015 27.6 2.2 22 126-147 249-270 (271)
109 2e8p_A ELF3 protein; cell-free 20.3 53 0.0018 22.7 2.1 36 71-107 28-66 (92)
110 2jv3_A ETS1 proto-oncogene; ET 20.1 45 0.0015 23.8 1.7 37 71-108 45-82 (110)
No 1
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=281.65 Aligned_cols=157 Identities=22% Similarity=0.385 Sum_probs=138.3
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc--CCCChhhHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA--AKRNPEQDKEAQAW 78 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~~~~~e~~i~~w 78 (218)
.|||+++++|++++|+++. +|++.||+.++|+++|++++|+++|||||+||+|+|+++|++|+ +++++
T Consensus 9 ~~md~~~~~k~a~~y~~~~-~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~--------- 78 (190)
T 2rr8_A 9 EEMDERRRQNVAYEYLCHL-EEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDR--------- 78 (190)
T ss_dssp CCSSSSCSCHHHHHHHHHH-HHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTT---------
T ss_pred hhhhHHHHHHHHHhhcHHH-HHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCccccccccc---------
Confidence 4899999999999999988 89999999999999987678999999999999999999999873 33221
Q ss_pred HHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhcccc
Q psy17184 79 IETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEKK 158 (218)
Q Consensus 79 ie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~k 158 (218)
...+++.++++|+++|||++||++|+++|||+.++|+|.||||++
T Consensus 79 -----------------------------------~~~~~~~~~~~f~~~eNI~~FL~ac~~~Gvp~~~lFet~DL~e~k 123 (190)
T 2rr8_A 79 -----------------------------------EQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRK 123 (190)
T ss_dssp -----------------------------------TCHHHHHTCCCSSTHHHHHHHHHGGGGTTCCSTTCCCHHHHTCTT
T ss_pred -----------------------------------ccccccCCCCcchHHHHHHHHHHHHHHcCCCccccCCHHHHHhcC
Confidence 111233355689999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhhhh-------------hcCCChhhhhcCCce---eeeccccCCCCC
Q psy17184 159 DIAQVTNTIYALGREVF-------------LRDFSEEQLQAGKTI---IGLQAGSNKGAT 202 (218)
Q Consensus 159 n~~qV~~~l~~L~r~~~-------------~r~f~~~~l~~~~~~---i~lq~G~nk~as 202 (218)
|+.+|+.||++|++.+. +|+||+++|++++.+ ||||||++...+
T Consensus 124 n~~~Vi~cL~aL~~~a~~~g~~P~~~~~~~~r~Fteeql~~~~~~l~~~glqm~~f~~~~ 183 (190)
T 2rr8_A 124 NMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVDFTEEEINNMKTELEKYGIQMPAFSKIG 183 (190)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCCCCCCCTTSSCCCHHHHHHHHHHHHHSCCCCCCGGGCT
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCccccccCCCCCHHHHHHHHHHHHhhccCCCcchhHH
Confidence 99999999999999976 588999999999999 999999886543
No 2
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=2e-37 Score=254.76 Aligned_cols=144 Identities=25% Similarity=0.378 Sum_probs=120.9
Q ss_pred ChHHHHHHHHHccCCh-hHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCChhhHHHHHHHHH
Q psy17184 2 SLQRQVAAKIAAKRNP-EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNPEQDKEAQAWIE 80 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~-~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~~~e~~i~~wie 80 (218)
|++.|+++|...+|+. +.++|++.||+.++++++|+.++|.++|||||+||+|+|+++|++|+
T Consensus 38 ~~~~d~~rk~~~~ye~l~~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv~---------------- 101 (203)
T 1p5s_A 38 TRLAAKQRETLQAYDYLCRVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLI---------------- 101 (203)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTTSCC----------------
T ss_pred cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCcc----------------
Confidence 4678899999999998 78999999999999999986567888888888888888887776553
Q ss_pred HhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCccccc-CCCCccccchhHHHHHHHHHHhCCCccCccccchhccccC
Q psy17184 81 TVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN-SSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEKKD 159 (218)
Q Consensus 81 ~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn 159 (218)
+|+ .+..+|+++|||++||++|+++|||+.++|++.||||++|
T Consensus 102 ------------------------------------kI~~~s~~~f~~~eNI~~FL~ac~~~Gvp~~~lF~t~DL~e~kn 145 (203)
T 1p5s_A 102 ------------------------------------KIFYSNELQFRHSDNINKFLDFIHGIGLPEIFHFELTDIYEGKN 145 (203)
T ss_dssp ------------------------------------CCCCCSSSCCCHHHHHHHHHHHHHHTTCCGGGCCCHHHHHSCSC
T ss_pred ------------------------------------cccCCCCCcchHHHHHHHHHHHHHHcCCCcccccCHHHHHhcCC
Confidence 332 2456899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhh-------------hcCCChhhhhcCCceeeeccccCCCCCcCCCC
Q psy17184 160 IAQVTNTIYALGREVF-------------LRDFSEEQLQAGKTIIGLQAGSNKGATQAGQN 207 (218)
Q Consensus 160 ~~qV~~~l~~L~r~~~-------------~r~f~~~~l~~~~~~i~lq~G~nk~asq~g~~ 207 (218)
+.+|+.||++|++.+. +|+|++|+|++ +|++++|+|++
T Consensus 146 ~~~Vi~~L~aL~~~a~~~g~~p~l~~l~~~~~Fseeql~~----------~n~~l~q~G~~ 196 (203)
T 1p5s_A 146 LPKVIYCIHALSYFLSMQDLAPPLIKSDENLSFTDEDVSI----------IVRRLRQSNVI 196 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCCCCCTTCCCCHHHHHH----------HHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCCCchhhhcccCCCCHHHHHH----------HHHHHHHcCCC
Confidence 9999999999999986 48899999998 78999999987
No 3
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=244.08 Aligned_cols=124 Identities=34% Similarity=0.645 Sum_probs=107.9
Q ss_pred ChHHHHHHHHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCChhhHHHHHHHHHH
Q psy17184 2 SLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNPEQDKEAQAWIET 81 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~~~e~~i~~wie~ 81 (218)
|||+|+++|+++||+++++++++.||+.++|++++ ++|.++|||||+||+|+|+++|++|
T Consensus 1 gl~~~~~~k~~~ky~~~~~~e~~~WIe~~l~~~i~--~~l~~~L~DGvvLCkL~N~l~P~~v------------------ 60 (146)
T 1wyn_A 1 GSSGSSGNRLLSKYDPQKEAELRTWIEGLTGLSIG--PDFQKGLKDGTILCTLMNKLQPGSV------------------ 60 (146)
T ss_dssp CCCCCCCCCCCSCCCTTHHHHHHHHHHHHHCCCCC--SCHHHHHHTTSHHHHHHHHHCTTSC------------------
T ss_pred CccHHHHHHHHccCCHHHHHHHHHHHHHHhCCCCc--HHHHHHHccHHHHHHHHHHhCCCCc------------------
Confidence 89999999999999999999999999999999884 3577777777777777777766544
Q ss_pred hhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhccccChh
Q psy17184 82 VTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEKKDIA 161 (218)
Q Consensus 82 ~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn~~ 161 (218)
++|+.++.+|+++|||+.|+++|+.+|||+.++|++.||||++|++
T Consensus 61 ----------------------------------~kin~~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~e~kn~~ 106 (146)
T 1wyn_A 61 ----------------------------------PKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMT 106 (146)
T ss_dssp ----------------------------------SCCCCSSCHHHHHHHHHHHHHHHHHHTCCSSSCCCHHHHHTCSCSH
T ss_pred ----------------------------------cccccccccccHHHHHHHHHHHHHHcCCCcccccChhHHHhcCChH
Confidence 4445556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCC
Q psy17184 162 QVTNTIYALGREVFLRDF 179 (218)
Q Consensus 162 qV~~~l~~L~r~~~~r~f 179 (218)
+|+.||++|++.+.+..+
T Consensus 107 ~V~~cL~aL~~~a~~~g~ 124 (146)
T 1wyn_A 107 QVQVSLLALAGKAKTKGL 124 (146)
T ss_dssp HHHHHHHHHHHHHGGGTS
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 999999999999975543
No 4
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=243.17 Aligned_cols=128 Identities=34% Similarity=0.535 Sum_probs=112.1
Q ss_pred ChHHHHHHHHHccCChhHHHHHHHHHHHHhCCCCCCc----hhHHHHhhhhhHHHhhhhhccCCCccCCCChhhHHHHHH
Q psy17184 2 SLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQKFPAG----VLYEDAIKDGQILCHLINKLKPGSIAAKRNPEQDKEAQA 77 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~----~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~~~e~~i~~ 77 (218)
|||+|+++|+++||++++++|++.||+.++|++++++ ++|+++|||||+||+|+|.++|.
T Consensus 1 gl~~e~~~k~~~ky~~~~e~e~~~WIe~~l~~~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~---------------- 64 (155)
T 1wym_A 1 GSSGSSGQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPE---------------- 64 (155)
T ss_dssp CCCSSSCSSCCCSCCHHHHHHHHHHHHHHSSSCCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCT----------------
T ss_pred CccHHHHHHHHccCCHHHHHHHHHHHHHHhCCCCCCCcccHHHHHHHHcchHHHHHHHHHhccc----------------
Confidence 8999999999999999999999999999999998753 46777777777777777776661
Q ss_pred HHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhccc
Q psy17184 78 WIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEK 157 (218)
Q Consensus 78 wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~ 157 (218)
.+++|++|+.++++|+++|||++||++|+++|||+.++|++.||||+
T Consensus 65 ---------------------------------~~~~i~kIn~~~~~F~~~eNI~~FL~ac~~~Gv~~~~lF~t~DL~e~ 111 (155)
T 1wym_A 65 ---------------------------------GQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEG 111 (155)
T ss_dssp ---------------------------------TTCSCCCCCCCCCHHHHHHHHHHHHHHHHHHTCCTTTCCCHHHHHTC
T ss_pred ---------------------------------cCCCcCcccCCCccccHHHHHHHHHHHHHHcCCCccccCChHHHHhc
Confidence 02667777777789999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHhhhhhcC
Q psy17184 158 KDIAQVTNTIYALGREVFLRD 178 (218)
Q Consensus 158 kn~~qV~~~l~~L~r~~~~r~ 178 (218)
+|+.+|+.||++|++.+.+..
T Consensus 112 kn~~~Vi~cL~aL~~~a~~~~ 132 (155)
T 1wym_A 112 KNMACVQRTLMNLGGLAVARD 132 (155)
T ss_dssp SCHHHHHHHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999998554
No 5
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=235.51 Aligned_cols=123 Identities=41% Similarity=0.659 Sum_probs=106.6
Q ss_pred ChHHHHHHHHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCChhhHHHHHHHHHH
Q psy17184 2 SLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNPEQDKEAQAWIET 81 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~~~e~~i~~wie~ 81 (218)
|||+|+++|+++||++++++|++.||+.++|++++ ++|.++|||||+||+|+|+++|+
T Consensus 1 gl~~~~~~k~~~ky~~~~~~e~~~WIe~~l~~~~~--~~l~~~L~DGvvLCkL~N~l~P~-------------------- 58 (136)
T 1wyp_A 1 GSSGSSGNKLAQKYDHQREQELREWIEGVTGRRIG--NNFMDGLKDGIILCEFINKLQPG-------------------- 58 (136)
T ss_dssp CCCCCSCCCCCSSCCHHHHHHHHHHHHHHTCCCCC--SCTTHHHHTSHHHHHHHHHHSTT--------------------
T ss_pred CccHHHHHHHHccCCHHHHHHHHHHHHHHhCCCCc--HHHHHHHccHHhHHHHHHhhCCC--------------------
Confidence 89999999999999999999999999999999874 34667777777666666666654
Q ss_pred hhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhccccChh
Q psy17184 82 VTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEKKDIA 161 (218)
Q Consensus 82 ~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn~~ 161 (218)
++++|+.++.+|+++|||+.|+++|+.+|+|+.++|++.||||++|++
T Consensus 59 --------------------------------~v~ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~e~kn~~ 106 (136)
T 1wyp_A 59 --------------------------------SVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHT 106 (136)
T ss_dssp --------------------------------SSSCCCCSSCSHHHHHHHHHHHHHHHHHTCCGGGCCCHHHHHSCSCSH
T ss_pred --------------------------------CcccccccccchHHHHHHHHHHHHHHHcCCCcccccCchHHhcCCCHH
Confidence 444555556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcC
Q psy17184 162 QVTNTIYALGREVFLRD 178 (218)
Q Consensus 162 qV~~~l~~L~r~~~~r~ 178 (218)
+|+.||++|++.+.+..
T Consensus 107 ~V~~cL~aL~~~a~~~g 123 (136)
T 1wyp_A 107 QVQSTLLALASMAKTKG 123 (136)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCC
Confidence 99999999999997543
No 6
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=9.1e-35 Score=237.12 Aligned_cols=141 Identities=23% Similarity=0.427 Sum_probs=121.9
Q ss_pred ChHHHHHHHHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc--CCCChhhHHHHHHHH
Q psy17184 2 SLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA--AKRNPEQDKEAQAWI 79 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~~~~~e~~i~~wi 79 (218)
.+|.+.+++++.+|+...+ |++.||+.++|+++|++++|+++|+|||+||+|+|+++|++++ +++.+.
T Consensus 32 ~md~~r~~~~a~eyl~~~~-e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~--------- 101 (193)
T 3i6x_A 32 EMDERRRQNVAYEYLCHLE-EAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDRE--------- 101 (193)
T ss_dssp THHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTT---------
T ss_pred HHHHHHHhhHHHHHHHHHH-HHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcc---------
Confidence 4688889999999999777 9999999999999987678999999999999999999998874 222210
Q ss_pred HHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhccccC
Q psy17184 80 ETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEKKD 159 (218)
Q Consensus 80 e~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn 159 (218)
..+++.++++|+++|||++||++|+++|||+.++|++.|||+++|
T Consensus 102 -----------------------------------~~~~~~~~~~F~~~eNI~~FL~ac~~~Gvp~~~lFet~DL~e~kn 146 (193)
T 3i6x_A 102 -----------------------------------QTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRKN 146 (193)
T ss_dssp -----------------------------------CHHHHHSCCCGGGHHHHHHHHHHHHHHTCCGGGCCCHHHHHSCSC
T ss_pred -----------------------------------cccccCcccchHHHHHHHHHHHHHHHcCCCcccCCCcHHHhcCCC
Confidence 012233456899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhh-------------hcCCChhhhhcC
Q psy17184 160 IAQVTNTIYALGREVF-------------LRDFSEEQLQAG 187 (218)
Q Consensus 160 ~~qV~~~l~~L~r~~~-------------~r~f~~~~l~~~ 187 (218)
+++|+.||++|++.+. +++||+++|++.
T Consensus 147 ~~~V~~cL~aL~~~a~~~G~~P~i~~l~g~~~Ft~eei~~~ 187 (193)
T 3i6x_A 147 MPRCIYCIHALSLYLFKLGLAPQIQDLYGKVDFTEEEINNM 187 (193)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCCCCTTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcccccCCCCcCHHHHHHH
Confidence 9999999999999997 567889888753
No 7
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=1.8e-34 Score=229.07 Aligned_cols=127 Identities=27% Similarity=0.438 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccC-CCCccccchhHHHHHHHHHHhCCCccCcc
Q psy17184 71 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINNFQKAIKDYGVADIDVF 149 (218)
Q Consensus 71 ~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~-~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF 149 (218)
.+++++.||+.+++..+|+.++|.+.|+||++||+|+|.+.|+++++|+. ++++|+++|||++|+++|+++|||+.++|
T Consensus 12 ~~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF 91 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEIFHF 91 (159)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHHHcCCCccccc
Confidence 35789999999999999977789999999999999999999999999987 57899999999999999999999999999
Q ss_pred ccchhccccChhHHHHHHHHHHhhhh-------------hcCCChhhhhcCCcee---eecccc
Q psy17184 150 QTVDLYEKKDIAQVTNTIYALGREVF-------------LRDFSEEQLQAGKTII---GLQAGS 197 (218)
Q Consensus 150 ~~~DL~e~kn~~qV~~~l~~L~r~~~-------------~r~f~~~~l~~~~~~i---~lq~G~ 197 (218)
++.||||++|+++|+.||++|++.+. +|+||+|||++++..+ |+||+.
T Consensus 92 ~~~DL~e~kn~~~Vi~~L~aL~~~~~~~g~~p~~~~~~~~~~fseeql~~~~~~l~~~g~~~~~ 155 (159)
T 1p2x_A 92 ELTDIYEGKNLPKVIYCIHALSYFLSMQDLAPPLIKSDENLSFTDEDVSIIVRRLRQSNVILPN 155 (159)
T ss_dssp CHHHHSSCSCHHHHHHHHHHHHHHHHTTTSSCCCCCCCTTCCCCHHHHHHHHHHHHHCCCCCCC
T ss_pred CHHHHHhcCCHHHHHHHHHHHHHHHhhCCCCCCchhhhccCCCCHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999986 5899999999988877 777753
No 8
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=99.97 E-value=1.2e-31 Score=200.01 Aligned_cols=104 Identities=42% Similarity=0.740 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCcc
Q psy17184 70 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVF 149 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF 149 (218)
+.+++++.||+.+++..++ ++|.+.|+||++||+|+|.+.||++++|+.++.+|+++|||+.|+++|+++|+|+.++|
T Consensus 3 ~~e~e~~~WIe~~l~~~~~--~~l~~~L~dGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF 80 (108)
T 1h67_A 3 QTERQLRVWIEGATGRRIG--DNFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDIF 80 (108)
T ss_dssp CSSHHHHHHHHHHHSCCCC--SCHHHHHHHCSHHHHHHHHHSTTSSTTCCCTTSSHHHHHHHHHHHHHHHHHTSCGGGSC
T ss_pred HHHHHHHHHHHHHhCCCCc--HHHHHHHccHHHHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHHHcCCCccccc
Confidence 4578899999999999885 37999999999999999999999999999988999999999999999999999999999
Q ss_pred ccchhccccChhHHHHHHHHHHhhhh
Q psy17184 150 QTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 150 ~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
++.||||++|+++|+.||++|+|.+.
T Consensus 81 ~~~DL~e~kn~~~V~~~l~aL~~~a~ 106 (108)
T 1h67_A 81 EANDLFENTNHTQVQSTLIALASQAK 106 (108)
T ss_dssp CHHHHHHTCCSHHHHHHHHHHHHHHH
T ss_pred ChhHHHhCCChHHHHHHHHHHHHHHc
Confidence 99999999999999999999999986
No 9
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=99.97 E-value=3.1e-31 Score=207.28 Aligned_cols=114 Identities=37% Similarity=0.556 Sum_probs=106.7
Q ss_pred CCCChhhHHHHHHHHHHhhCCCCCC----ccchHHhhhchhHHHHHHHhhCC---CCcc-cccCCCCccccchhHHHHHH
Q psy17184 65 AKRNPEQDKEAQAWIETVTGQKFPA----GVLYEDAIKDGQILCHLINKLKP---GSVA-KINSSGGQFKFMENINNFQK 136 (218)
Q Consensus 65 kk~~~~~e~~i~~wie~~l~~~l~~----~d~f~~~l~dG~iLc~L~n~l~p---g~i~-ki~~~~~~f~~~eNI~~Fl~ 136 (218)
.+|+++.+++++.||+.+++..+++ .++|.+.|+||++||+|+|.++| ++|+ +|+.++++|+++|||++||+
T Consensus 4 ~~y~~~~e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin~~~~~f~~~eNI~~FL~ 83 (144)
T 1ujo_A 4 GSSGEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFLK 83 (144)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSSCCCSHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeecCCCchhHHHHHHHHHHH
Confidence 4688999999999999999999862 35899999999999999999999 8999 99988899999999999999
Q ss_pred HHHHhCCCccCccccchhccccChhHHHHHHHHHHhhhhhcC
Q psy17184 137 AIKDYGVADIDVFQTVDLYEKKDIAQVTNTIYALGREVFLRD 178 (218)
Q Consensus 137 ~~~~~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~~r~ 178 (218)
+|+++|||+.++|++.||||++|+.+|+.||++|+|.+.++.
T Consensus 84 ac~~~Gv~~~~lF~t~DL~e~kn~~~V~~cL~aL~~~a~~~~ 125 (144)
T 1ujo_A 84 AAEDYGVIKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVTKN 125 (144)
T ss_dssp HHHHHTCCSSSCCCHHHHHTCSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCcCccccCChhHHHhcCCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998553
No 10
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=99.94 E-value=2.2e-27 Score=181.29 Aligned_cols=104 Identities=20% Similarity=0.473 Sum_probs=91.7
Q ss_pred hhHHHHHHHHHHhhC-CC----CCCccch-HHhhhchhHHHHHHHhhCCCCcccccC-CCCccccchhHHHHHHHHHH-h
Q psy17184 70 EQDKEAQAWIETVTG-QK----FPAGVLY-EDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINNFQKAIKD-Y 141 (218)
Q Consensus 70 ~~e~~i~~wie~~l~-~~----l~~~d~f-~~~l~dG~iLc~L~n~l~pg~i~ki~~-~~~~f~~~eNI~~Fl~~~~~-~ 141 (218)
..++++..||+.+.+ .. +++.++| ++.|+||++||+|+|.+.||++++|+. +.++|+++|||++|+++|++ +
T Consensus 12 ~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~kI~~~~~~~f~~~eNI~~FL~a~~~~~ 91 (126)
T 2l3g_A 12 NSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASL 91 (126)
T ss_dssp CHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCccCCCCCcchHHHHHHHHHHHHHHHhC
Confidence 567899999999965 22 3344456 699999999999999999999999975 44689999999999999999 9
Q ss_pred CCCccCccccchhccccChhHHHHHHHHHHhhhhh
Q psy17184 142 GVADIDVFQTVDLYEKKDIAQVTNTIYALGREVFL 176 (218)
Q Consensus 142 Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~~ 176 (218)
|+ ++|++.||||++|+++|+.||++|+|.+++
T Consensus 92 g~---~lF~t~DL~e~kn~~~V~~cL~aL~~~~~~ 123 (126)
T 2l3g_A 92 RL---ETFDANDLYQGQNFNKVLSSLVTLNKVTAD 123 (126)
T ss_dssp CC---CCCCHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CC---CccCHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 86 899999999999999999999999999874
No 11
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.94 E-value=2.2e-27 Score=180.23 Aligned_cols=104 Identities=26% Similarity=0.452 Sum_probs=92.0
Q ss_pred hhHHHHHHHHHHhhCCCC-----CCccc-hHHhhhchhHHHHHHHhhCCCCcccccCC-CCccccchhHHHHHHHHHHhC
Q psy17184 70 EQDKEAQAWIETVTGQKF-----PAGVL-YEDAIKDGQILCHLINKLKPGSVAKINSS-GGQFKFMENINNFQKAIKDYG 142 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l-----~~~d~-f~~~l~dG~iLc~L~n~l~pg~i~ki~~~-~~~f~~~eNI~~Fl~~~~~~G 142 (218)
+.++++..||+.+++... ++.+. |.+.|+||++||+|+|.+.|+++++|+.+ .++|+++|||+.|+++|+.+|
T Consensus 6 ~~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~ki~~~~~~~f~~~eNI~~FL~a~~~~g 85 (121)
T 1wyr_A 6 SGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCATLQ 85 (121)
T ss_dssp CSHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCCcCCCCCcchHHHHHHHHHHHHHHHHcC
Confidence 567899999999976443 23334 57999999999999999999999999764 468999999999999999999
Q ss_pred CCccCccccchhccccChhHHHHHHHHHHhhhhh
Q psy17184 143 VADIDVFQTVDLYEKKDIAQVTNTIYALGREVFL 176 (218)
Q Consensus 143 v~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~~ 176 (218)
+ ++|++.||||++|+++|+.||++|+|.+++
T Consensus 86 ~---~~F~~~DL~e~kn~~~V~~cL~aL~~~~~~ 116 (121)
T 1wyr_A 86 V---EIFDPDDLYSGVNFSKVLSTLLAVNKATES 116 (121)
T ss_dssp C---CCCCHHHHHTCSCHHHHHHHHHHHHHHHSC
T ss_pred C---CccCHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 7 799999999999999999999999999864
No 12
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.84 E-value=4.2e-21 Score=179.87 Aligned_cols=106 Identities=25% Similarity=0.479 Sum_probs=90.6
Q ss_pred hhHHHHHHHHHHhhCCCCC------C--ccchHHhhhchhHHHHHHHhhCCCCcc--cccC-CC-CccccchhHHHHHHH
Q psy17184 70 EQDKEAQAWIETVTGQKFP------A--GVLYEDAIKDGQILCHLINKLKPGSVA--KINS-SG-GQFKFMENINNFQKA 137 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l~------~--~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~~-~~-~~f~~~eNI~~Fl~~ 137 (218)
+...++..||+.+...+.. + ..+|.+.|+||++||+|+|.++|+.++ +++. ++ .+|+++|||++|++|
T Consensus 5 ~~w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~ 84 (587)
T 3ky9_A 5 ELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLST 84 (587)
T ss_dssp CHHHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHH
Confidence 3456889999998653332 1 147999999999999999999999995 6764 33 369999999999999
Q ss_pred H-HHhCCCccCccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 138 I-KDYGVADIDVFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 138 ~-~~~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
| +++|||+.++|++.|||+++|+.+|+.||++|++.+.
T Consensus 85 ~~~~~g~~~~~~f~~~Dl~~~~~~~~V~~~l~~l~~~~~ 123 (587)
T 3ky9_A 85 CCEKFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTPI 123 (587)
T ss_dssp HHHTTCCCTTSSCCHHHHHTCSCHHHHHHHHHHHHHSTT
T ss_pred HHHHcCCCHHHcCCchhhhccCCcchHHHHHHHHhhhhh
Confidence 9 7899999999999999999999999999999999553
No 13
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=99.82 E-value=1.2e-20 Score=147.27 Aligned_cols=92 Identities=16% Similarity=0.330 Sum_probs=80.2
Q ss_pred HccCChhHHHHHHHHHHHHhCCCCCC----chhHHHHhhhhhHHHhhhhhccC---CCcc-CCCCh----hhHHHHHHHH
Q psy17184 12 AAKRNPEQDKEAQAWIETVTGQKFPA----GVLYEDAIKDGQILCHLINKLKP---GSIA-AKRNP----EQDKEAQAWI 79 (218)
Q Consensus 12 ~~ky~~~~~~e~~~Wie~~~g~~i~~----~~~~~~~LkdGvvLC~L~n~l~P---~~i~-kk~~~----~~e~~i~~wi 79 (218)
+.|||+++++|+++||+.++|+++++ .++|+++|||||+||+|+|+++| ++|+ +++.+ .+++||..||
T Consensus 3 ~~~y~~~~e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin~~~~~f~~~eNI~~FL 82 (144)
T 1ujo_A 3 SGSSGEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFL 82 (144)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSSCCCSHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeecCCCchhHHHHHHHHHH
Confidence 57999999999999999999999862 26899999999999999999999 8887 65532 6789999999
Q ss_pred HHhhCCCCCCccchH--HhhhchhHH
Q psy17184 80 ETVTGQKFPAGVLYE--DAIKDGQIL 103 (218)
Q Consensus 80 e~~l~~~l~~~d~f~--~~l~dG~iL 103 (218)
++|..+++|+.+.|+ |+++.+++-
T Consensus 83 ~ac~~~Gv~~~~lF~t~DL~e~kn~~ 108 (144)
T 1ujo_A 83 KAAEDYGVIKTDMFQTVDLYEGKDMA 108 (144)
T ss_dssp HHHHHHTCCSSSCCCHHHHHTCSCHH
T ss_pred HHHHHcCcCccccCChhHHHhcCCHH
Confidence 999999999988887 888776533
No 14
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.79 E-value=6.2e-19 Score=139.61 Aligned_cols=134 Identities=16% Similarity=0.283 Sum_probs=99.5
Q ss_pred HHHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCC-----hhhHHHHHHHHHHhh
Q psy17184 9 AKIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRN-----PEQDKEAQAWIETVT 83 (218)
Q Consensus 9 ~k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~-----~~~e~~i~~wie~~l 83 (218)
+..+..|.. .++|++.||+.++|+++|++++|.++|||||+||+|+|+++|++|+++++ ..+.+||..|+.+|.
T Consensus 3 ~~~a~eyl~-~~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~ 81 (159)
T 1p2x_A 3 TLQAYDYLC-RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIH 81 (159)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHH
T ss_pred chHHHHHHH-HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHH
Confidence 445555643 56899999999999999976789999999999999999999999988864 368999999999999
Q ss_pred CCCCCCccchH--HhhhchhH----HHHHHHhh---CCCCcccccC--CCCccccchhHHHHHHHHHHhCCC
Q psy17184 84 GQKFPAGVLYE--DAIKDGQI----LCHLINKL---KPGSVAKINS--SGGQFKFMENINNFQKAIKDYGVA 144 (218)
Q Consensus 84 ~~~l~~~d~f~--~~l~dG~i----Lc~L~n~l---~pg~i~ki~~--~~~~f~~~eNI~~Fl~~~~~~Gv~ 144 (218)
.+|+|+.+.|+ |+++.+++ .|-++-.- .+|.-|++.+ .+..|.. |.++..-....+.|++
T Consensus 82 ~~Gv~~~~lF~~~DL~e~kn~~~Vi~~L~aL~~~~~~~g~~p~~~~~~~~~~fse-eql~~~~~~l~~~g~~ 152 (159)
T 1p2x_A 82 GIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLSMQDLAPPLIKSDENLSFTD-EDVSIIVRRLRQSNVI 152 (159)
T ss_dssp HTTCCGGGCCCHHHHSSCSCHHHHHHHHHHHHHHHHTTTSSCCCCCCCTTCCCCH-HHHHHHHHHHHHCCCC
T ss_pred HcCCCcccccCHHHHHhcCCHHHHHHHHHHHHHHHhhCCCCCCchhhhccCCCCH-HHHHHHHHHHHHcCCC
Confidence 99999988887 78877643 33333211 2343344432 1235544 4477766666777887
No 15
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=99.77 E-value=2.8e-19 Score=133.00 Aligned_cols=86 Identities=28% Similarity=0.579 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCCh----hhHHHHHHHHHHhhCCCCCCccc
Q psy17184 17 PEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNP----EQDKEAQAWIETVTGQKFPAGVL 92 (218)
Q Consensus 17 ~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~----~~e~~i~~wie~~l~~~l~~~d~ 92 (218)
++.|+|++.||++++|++++ ++|.++|||||+||+|+|+++|+++++++.+ .+.+||..|++++..+|+|+.+.
T Consensus 2 ~~~e~e~~~WIe~~l~~~~~--~~l~~~L~dGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~l 79 (108)
T 1h67_A 2 PQTERQLRVWIEGATGRRIG--DNFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDI 79 (108)
T ss_dssp CCSSHHHHHHHHHHHSCCCC--SCHHHHHHHCSHHHHHHHHHSTTSSTTCCCTTSSHHHHHHHHHHHHHHHHHTSCGGGS
T ss_pred hHHHHHHHHHHHHHhCCCCc--HHHHHHHccHHHHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHHHcCCCcccc
Confidence 46788999999999999985 4699999999999999999999999887643 67899999999999999999887
Q ss_pred hH--HhhhchhHHH
Q psy17184 93 YE--DAIKDGQILC 104 (218)
Q Consensus 93 f~--~~l~dG~iLc 104 (218)
|+ |+++.+++--
T Consensus 80 F~~~DL~e~kn~~~ 93 (108)
T 1h67_A 80 FEANDLFENTNHTQ 93 (108)
T ss_dssp CCHHHHHHTCCSHH
T ss_pred cChhHHHhCCChHH
Confidence 87 7777654333
No 16
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=99.63 E-value=4.2e-16 Score=118.72 Aligned_cols=88 Identities=17% Similarity=0.348 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHHhC-CC----CCCchhH-HHHhhhhhHHHhhhhhccCCCccCCCC-----hhhHHHHHHHHHHhhC-
Q psy17184 17 PEQDKEAQAWIETVTG-QK----FPAGVLY-EDAIKDGQILCHLINKLKPGSIAAKRN-----PEQDKEAQAWIETVTG- 84 (218)
Q Consensus 17 ~~~~~e~~~Wie~~~g-~~----i~~~~~~-~~~LkdGvvLC~L~n~l~P~~i~kk~~-----~~~e~~i~~wie~~l~- 84 (218)
.+.++|+++||+++++ +. ++++++| +++|||||+||+|+|+++|++|++++. ..+++||..|++++..
T Consensus 11 ~~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~kI~~~~~~~f~~~eNI~~FL~a~~~~ 90 (126)
T 2l3g_A 11 MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGAS 90 (126)
T ss_dssp CCHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCccCCCCCcchHHHHHHHHHHHHHHHh
Confidence 4568899999999976 32 3344555 799999999999999999999998853 2578999999999988
Q ss_pred CCCCCccchH--HhhhchhHHHHHH
Q psy17184 85 QKFPAGVLYE--DAIKDGQILCHLI 107 (218)
Q Consensus 85 ~~l~~~d~f~--~~l~dG~iLc~L~ 107 (218)
+++ +.|+ |+++.+++--++.
T Consensus 91 ~g~---~lF~t~DL~e~kn~~~V~~ 112 (126)
T 2l3g_A 91 LRL---ETFDANDLYQGQNFNKVLS 112 (126)
T ss_dssp SCC---CCCCHHHHHTTSCHHHHHH
T ss_pred CCC---CccCHHHHHhCCCHHHHHH
Confidence 765 4566 7777665443333
No 17
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.62 E-value=2e-16 Score=119.81 Aligned_cols=88 Identities=16% Similarity=0.317 Sum_probs=68.1
Q ss_pred ChhHHHHHHHHHHHHhCCCC-----CCch-hHHHHhhhhhHHHhhhhhccCCCccCCCC-----hhhHHHHHHHHHHhhC
Q psy17184 16 NPEQDKEAQAWIETVTGQKF-----PAGV-LYEDAIKDGQILCHLINKLKPGSIAAKRN-----PEQDKEAQAWIETVTG 84 (218)
Q Consensus 16 ~~~~~~e~~~Wie~~~g~~i-----~~~~-~~~~~LkdGvvLC~L~n~l~P~~i~kk~~-----~~~e~~i~~wie~~l~ 84 (218)
.++.++|+++||+.+++.+. ++++ +|+++|||||+||+|+|+++|++|++++. ..+++||..|++++..
T Consensus 4 ~~~~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~ki~~~~~~~f~~~eNI~~FL~a~~~ 83 (121)
T 1wyr_A 4 GSSGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCAT 83 (121)
T ss_dssp SCCSHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCCcCCCCCcchHHHHHHHHHHHHHHHH
Confidence 35678999999999987543 2333 47999999999999999999999998753 2578999999999888
Q ss_pred CCCCCccchH--HhhhchhHHHHH
Q psy17184 85 QKFPAGVLYE--DAIKDGQILCHL 106 (218)
Q Consensus 85 ~~l~~~d~f~--~~l~dG~iLc~L 106 (218)
+++ +.|+ |+++.+++--++
T Consensus 84 ~g~---~~F~~~DL~e~kn~~~V~ 104 (121)
T 1wyr_A 84 LQV---EIFDPDDLYSGVNFSKVL 104 (121)
T ss_dssp HTC---CCCCHHHHHTCSCHHHHH
T ss_pred cCC---CccCHHHHHcCCCHHHHH
Confidence 776 3565 777765543333
No 18
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.4e-14 Score=108.58 Aligned_cols=107 Identities=13% Similarity=0.243 Sum_probs=91.4
Q ss_pred CChhhHHHHHHHHHHhhCCC-CC-CccchHHhhhchhHHHHHHHhhCCCCcccccC-CCCccccchhHHHHHHHHHHhCC
Q psy17184 67 RNPEQDKEAQAWIETVTGQK-FP-AGVLYEDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINNFQKAIKDYGV 143 (218)
Q Consensus 67 ~~~~~e~~i~~wie~~l~~~-l~-~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~-~~~~f~~~eNI~~Fl~~~~~~Gv 143 (218)
+...++..+..||+..++.. ++ ...+|.+.|+||++||+|++.+.|+.+++++. +.+.|+++||++.|+++++.+|+
T Consensus 15 ~~~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~~~~~~p~~~~~~~eNv~~aL~~~~~~gv 94 (129)
T 2yrn_A 15 GLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACLNFLAAKGI 94 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCTTCCSSCCSTTHHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcccccCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 34466778999999987643 32 23468888999999999999999999998885 56899999999999999999999
Q ss_pred CccCccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 144 ADIDVFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 144 ~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
+..++ .+.|+++ .|...++.+|.+|.|+-+
T Consensus 95 ~~~~i-~~~DI~d-gn~~~iL~Llw~L~r~~q 124 (129)
T 2yrn_A 95 NIQGL-SAEEIRN-GNLKAILGLFFSLSRYKQ 124 (129)
T ss_dssp CCTTC-CHHHHHH-TCHHHHHHHHHHHHHHHS
T ss_pred cccCC-Chhhhhc-CCHhHHHHHHHHHHHHHh
Confidence 98887 7999997 789999999999987764
No 19
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.50 E-value=3.6e-13 Score=115.15 Aligned_cols=162 Identities=17% Similarity=0.250 Sum_probs=104.6
Q ss_pred ChHHHHHHHHHccCChhHHHHHHHHHHHHhCCC--------CCC-chhHHHHhhhhhHHHhhhhhccCCCcc--CCCC--
Q psy17184 2 SLQRQVAAKIAAKRNPEQDKEAQAWIETVTGQK--------FPA-GVLYEDAIKDGQILCHLINKLKPGSIA--AKRN-- 68 (218)
Q Consensus 2 gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g~~--------i~~-~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~~-- 68 (218)
|+|++...++..+|+++.+.....||...+++. +++ ..+|.+.|+||++||+|+|.+.|++++ +++.
T Consensus 8 g~~~~~~~~~~~~~~~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~ 87 (275)
T 1aoa_A 8 GTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK 87 (275)
T ss_dssp -------------CCHHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSS
T ss_pred ccchhccCCCccccCHHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCC
Confidence 788999999999999999999999999999863 322 257999999999999999999998774 2211
Q ss_pred ---hhhHHH-----------------------------------------------------------------------
Q psy17184 69 ---PEQDKE----------------------------------------------------------------------- 74 (218)
Q Consensus 69 ---~~~e~~----------------------------------------------------------------------- 74 (218)
..+.+|
T Consensus 88 ~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~DIvdg~~~liLgLlw~li~~~~~~~I~~~~~~~l~~ll~~ge~~~~~~~~ 167 (275)
T 1aoa_A 88 LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKL 167 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSSCTTCC--------CHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHcCCcccCCCHHHHHcCcHHHHHHHHHHHHHHhhhcccccccChHHHHhhccCCchhhhhcc
Confidence 112222
Q ss_pred -----HHHHHHHhhC-CCCCCccchHHhhhchhHHHHHHHhhCCCCccc------ccCCC-CccccchhHHHHHHHHHHh
Q psy17184 75 -----AQAWIETVTG-QKFPAGVLYEDAIKDGQILCHLINKLKPGSVAK------INSSG-GQFKFMENINNFQKAIKDY 141 (218)
Q Consensus 75 -----i~~wie~~l~-~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~k------i~~~~-~~f~~~eNI~~Fl~~~~~~ 141 (218)
+..|+...+. .+.+.-.+|.+.++||..+|.|++.+.|+.++. +.-.. ..-...+|....++.++++
T Consensus 168 s~~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~l 247 (275)
T 1aoa_A 168 SPEELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKL 247 (275)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHHHc
Confidence 3445544321 233223357777899999999999999986541 21111 2234568999999999999
Q ss_pred CCCccCccccchhccccChhHHHHHH
Q psy17184 142 GVADIDVFQTVDLYEKKDIAQVTNTI 167 (218)
Q Consensus 142 Gv~~~~lF~~~DL~e~kn~~qV~~~l 167 (218)
|+|. +..++|+.+. +. +.++|.
T Consensus 248 Gi~~--~l~peDi~~~-~~-k~i~ty 269 (275)
T 1aoa_A 248 GCRQ--FVTPADVVSG-NP-KLNLAF 269 (275)
T ss_dssp TCCC--SCCHHHHHTT-CH-HHHHHH
T ss_pred CCCC--cCCHHHcCCC-Ch-hHHHHH
Confidence 9986 6799999975 44 444443
No 20
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.33 E-value=9.4e-12 Score=105.24 Aligned_cols=156 Identities=14% Similarity=0.208 Sum_probs=108.2
Q ss_pred HHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCCh----hhH-------------
Q psy17184 10 KIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNP----EQD------------- 72 (218)
Q Consensus 10 k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~----~~e------------- 72 (218)
-.+++|+...+.....||..++++.-+...++.+.|+||++||+|+|.|.|+++++...+ .+.
T Consensus 19 ~~~~~~~~~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~~ 98 (254)
T 1wku_A 19 LLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASK 98 (254)
T ss_dssp ----CHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred hhhccchHHHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHHc
Confidence 345678888888999999999976544445789999999999999999999888653211 112
Q ss_pred --------------------------------------------HHHHHHHHHhh-CC-CCCCccchHHhhhchhHHHHH
Q psy17184 73 --------------------------------------------KEAQAWIETVT-GQ-KFPAGVLYEDAIKDGQILCHL 106 (218)
Q Consensus 73 --------------------------------------------~~i~~wie~~l-~~-~l~~~d~f~~~l~dG~iLc~L 106 (218)
+.+..|+...+ ++ +++ -.+|.+.+.||..+|.|
T Consensus 99 gv~lv~I~~~DIvdG~~kliLgLlW~li~~~~i~~i~~~~~~~~~~LL~W~~~~~~~y~~v~-v~nFs~s~~DG~a~~aL 177 (254)
T 1wku_A 99 GVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVN-VQNFHTSWKDGLALCAL 177 (254)
T ss_dssp TCCCCSCCHHHHHHCCHHHHHHHHHHHHHHHHTTTCEETTEEHHHHHHHHHHHHHTTCTTCC-CCSSSGGGTTSHHHHHH
T ss_pred CCCccCCCHHHHhccchHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHccCCCCCc-CCCCccchhhHHHHHHH
Confidence 23556666544 23 232 23688889999999999
Q ss_pred HHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhcccc--ChhHHHHHHHHH
Q psy17184 107 INKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKK--DIAQVTNTIYAL 170 (218)
Q Consensus 107 ~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~k--n~~qV~~~l~~L 170 (218)
++.+.|+.+.--.- .+-...+|...-++.+++ +|+|. +..++|+.+.. +-..|+..+..+
T Consensus 178 i~~~~P~~id~~~l--~~~~~~~n~~~a~~~A~~~lGi~~--~l~peDiv~~~~pD~k~imtyva~l 240 (254)
T 1wku_A 178 IHRHRPDLIDYAKL--RKDDPIGNLNTAFEVAEKYLDIPK--MLDAEDIVNTPKPDEKAIMTYVSCF 240 (254)
T ss_dssp HHHHCTTSCCGGGC--CTTCHHHHHHHHHHHHHHHSCCCC--CSCHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHCCCccccccc--CcCCHHHHHHHHHHHHHHHcCCCC--cCCHHHHhccCCCcHHHHHHHHHHH
Confidence 99999998752111 112456889888888875 99996 78999998764 334444444333
No 21
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.2e-12 Score=103.02 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHHHhhCCCCCCccchH--HhhhchhH
Q psy17184 69 PEQDKEAQAWIETVTGQKFPAGVLYE--DAIKDGQI 102 (218)
Q Consensus 69 ~~~e~~i~~wie~~l~~~l~~~d~f~--~~l~dG~i 102 (218)
..+++||..||.+|..+|+|+.+.|+ |+++.+++
T Consensus 79 F~~~eNI~~FL~ac~~~Gv~~~~lF~t~DL~e~kn~ 114 (155)
T 1wym_A 79 FKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 114 (155)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCCHHHHHTCSCH
T ss_pred ccHHHHHHHHHHHHHHcCCCccccCChHHHHhcCCH
Confidence 47899999999999999999988887 88876643
No 22
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.27 E-value=5.8e-13 Score=103.81 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=29.2
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccchH--HhhhchhH
Q psy17184 68 NPEQDKEAQAWIETVTGQKFPAGVLYE--DAIKDGQI 102 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~l~~~d~f~--~~l~dG~i 102 (218)
...+++||..|++++..+|+|+.+.|+ |+++.+++
T Consensus 69 ~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~e~kn~ 105 (146)
T 1wyn_A 69 NWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNM 105 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCCCHHHHHTCSCS
T ss_pred cccHHHHHHHHHHHHHHcCCCcccccChhHHHhcCCh
Confidence 457899999999999999999988787 78876543
No 23
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.27 E-value=5.3e-12 Score=118.17 Aligned_cols=88 Identities=19% Similarity=0.233 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHhCCCCC------C--chhHHHHhhhhhHHHhhhhhccCCCcc--CCCC------hhhHHHHHHHHHH
Q psy17184 18 EQDKEAQAWIETVTGQKFP------A--GVLYEDAIKDGQILCHLINKLKPGSIA--AKRN------PEQDKEAQAWIET 81 (218)
Q Consensus 18 ~~~~e~~~Wie~~~g~~i~------~--~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~~------~~~e~~i~~wie~ 81 (218)
+.-.|++.||+++...+.. . .++|.++|||||+||+|+|+++|++|+ +++. ..+++||..||++
T Consensus 5 ~~w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~ 84 (587)
T 3ky9_A 5 ELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLST 84 (587)
T ss_dssp CHHHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHH
Confidence 4456899999998654331 1 168999999999999999999999994 4542 3578999999999
Q ss_pred h-hCCCCCCccchH--HhhhchhHHHH
Q psy17184 82 V-TGQKFPAGVLYE--DAIKDGQILCH 105 (218)
Q Consensus 82 ~-l~~~l~~~d~f~--~~l~dG~iLc~ 105 (218)
| ..+|+|+.+.|+ |+++.+++..+
T Consensus 85 ~~~~~g~~~~~~f~~~Dl~~~~~~~~V 111 (587)
T 3ky9_A 85 CCEKFGLKRSELFEAFDLFDVQDFGKV 111 (587)
T ss_dssp HHHTTCCCTTSSCCHHHHHTCSCHHHH
T ss_pred HHHHcCCCHHHcCCchhhhccCCcchH
Confidence 9 889999998888 88877754333
No 24
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.26 E-value=3.4e-11 Score=111.01 Aligned_cols=151 Identities=17% Similarity=0.231 Sum_probs=103.0
Q ss_pred ccCChhHHHHHHHHHHHHhCCC------CC--C-chhHHHHhhhhhHHHhhhhhccCCCc--cCCCC------hhhHHHH
Q psy17184 13 AKRNPEQDKEAQAWIETVTGQK------FP--A-GVLYEDAIKDGQILCHLINKLKPGSI--AAKRN------PEQDKEA 75 (218)
Q Consensus 13 ~ky~~~~~~e~~~Wie~~~g~~------i~--~-~~~~~~~LkdGvvLC~L~n~l~P~~i--~kk~~------~~~e~~i 75 (218)
|+++.+.+....+||+.+++++ +| + ..+|.+.|+||++||+|+|.+.|+++ ++++. ..+.+|+
T Consensus 2 ~~~~~~q~~~f~~WIN~~L~~~~~~~~~l~~~~~v~~l~~dL~DGv~L~~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi 81 (506)
T 1pxy_A 2 SPGIQSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENH 81 (506)
T ss_dssp -----CTHHHHHHHHHHHHTTCTTTTTTCSCCTTSSHHHHHSTTSHHHHHHHHHHSTTSSCGGGSCCCSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCccccccCCCCCchhHHHHHhcchHHHHHHHHHHcCCCCCccccCccccccHHHHHHHH
Confidence 6788889999999999999876 32 2 25799999999999999999999988 33331 2445555
Q ss_pred HHHHHHhhCCCCC-------------------------------------------------------------------
Q psy17184 76 QAWIETVTGQKFP------------------------------------------------------------------- 88 (218)
Q Consensus 76 ~~wie~~l~~~l~------------------------------------------------------------------- 88 (218)
..+++.+..+|++
T Consensus 82 ~~~L~~~k~~g~~~~~i~~~Dl~dg~~~liLgLiw~li~~~~l~~i~~~~~p~l~~l~~~~e~~~~~~~~~~~~~LL~W~ 161 (506)
T 1pxy_A 82 TLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLLADLNLKKTPQLVELLEDSDDVEELLRLPPEKVLLKWM 161 (506)
T ss_dssp HHHHHHHHHTTCCCTTCCHHHHHHTCHHHHHHHHHHHHHHHHHSSSSSCC-----------------CCSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCCHHHHhcCChHHHHHHHHHHHHHHHHHhhhhccCHHHHHhhcCCcchhhhhcCCHHHHHHHHH
Confidence 5555532211110
Q ss_pred -----------CccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCccccchhccc
Q psy17184 89 -----------AGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQTVDLYEK 157 (218)
Q Consensus 89 -----------~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~ 157 (218)
.-.+|...++||.++|.|++.+.|+.++.-.- .+-...+|....++.++++|+|. +..++|+.++
T Consensus 162 n~~l~~~g~~~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l--~~~~~~~n~~~a~~~a~~lGi~~--~l~peDi~~~ 237 (506)
T 1pxy_A 162 NFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATL--DAKDPLERAELVLSHAERMNCKR--YLTAEEIVEG 237 (506)
T ss_dssp HHHHHHTTCCSCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGG--GCCSHHHHHHHHHHHHHHTTCCC--CCCHHHHHTT
T ss_pred HHHHHhcCCCccCccccccccchHHHHHHHHHhCccccccccC--CcCCHHHHHHHHHHHHHHcCCCC--cCCHHHHhcC
Confidence 01235566889999999999999987752111 12346689999999999999987 7799999987
Q ss_pred cChhHHHHHHHH
Q psy17184 158 KDIAQVTNTIYA 169 (218)
Q Consensus 158 kn~~qV~~~l~~ 169 (218)
+. +.+++..+
T Consensus 238 -~~-k~v~tyva 247 (506)
T 1pxy_A 238 -SS-TLNLAFVA 247 (506)
T ss_dssp -CH-HHHHHHHH
T ss_pred -Ch-hHHHHHHH
Confidence 44 44444444
No 25
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.23 E-value=9.5e-11 Score=108.19 Aligned_cols=148 Identities=16% Similarity=0.178 Sum_probs=104.1
Q ss_pred HccCChhHHHHHHHHHHHHhCCC--------CCC-chhHHHHhhhhhHHHhhhhhccCCCcc--CCCC---------hhh
Q psy17184 12 AAKRNPEQDKEAQAWIETVTGQK--------FPA-GVLYEDAIKDGQILCHLINKLKPGSIA--AKRN---------PEQ 71 (218)
Q Consensus 12 ~~ky~~~~~~e~~~Wie~~~g~~--------i~~-~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~~---------~~~ 71 (218)
..||+++.+....+||..+++++ +++ ..+|.+.|+||++||+|+|.+.|+++. ++.. ..+
T Consensus 6 ~~~~~~~q~~~f~~WIN~~L~~~~~~~~~lpi~~~v~dl~~dL~DG~~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~~~ 85 (513)
T 1rt8_A 6 MHTINEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKC 85 (513)
T ss_dssp ---CCHHHHHHHHHHHHHHHTTCTTTGGGCSCCTTSTHHHHHTTTSHHHHHHHHHHSTTSSCGGGSCCCC---CCCHHHH
T ss_pred cCcccHHHHHHHHHHHHHhccCCccccccCCCCCchHHHHHHhhcHHHHHHHHHHHcCCCcchhhcCCccccCcccHHHH
Confidence 47999999999999999999875 322 257999999999999999999998773 1111 012
Q ss_pred HHH-----------------------------------------------------------------------------
Q psy17184 72 DKE----------------------------------------------------------------------------- 74 (218)
Q Consensus 72 e~~----------------------------------------------------------------------------- 74 (218)
.+|
T Consensus 86 ~eNi~~~L~~~k~~g~~~l~~i~~~DI~dg~~~liLgLiW~li~~~~l~~i~~~~~pel~~l~~~~e~~~~~~~~~~~~~ 165 (513)
T 1rt8_A 86 IENNNVVINSAKAMGGISITNIGAGDILEGREHLILGLVWQIIRRGLLGKIDITLHPELYRLLEEDETLDQFLRLPPEKI 165 (513)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSCCHHHHHTTCHHHHHHHHHHHHHHHSSCCC----------------CHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHHHcCCCccCCcCHHhhhcCCHHHHHHHHHHHHHHhhhcccccccCHHHHhhhccCCchhhhhcCCHHHH
Confidence 222
Q ss_pred HHHHHHHhh---CCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCcccc
Q psy17184 75 AQAWIETVT---GQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVFQT 151 (218)
Q Consensus 75 i~~wie~~l---~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF~~ 151 (218)
+..|+...+ +++++ -.+|...++||..+|.|++.+.|..++--. -..-...+|....++.++++|+|. +..+
T Consensus 166 LL~W~n~~l~~~g~~~~-V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~--l~~~~~~~n~~~a~~~a~~lgi~~--~l~p 240 (513)
T 1rt8_A 166 LLRWFNYHLKAANWPRT-VSNFSKDVSDGENYTVLLNQLAPELCSRAP--LQTTDVLQRAEQVLQNAEKLDCRK--YLTP 240 (513)
T ss_dssp HHHHHHHHHHHTTCSCC-CSCSSGGGTTSHHHHHHHHHHCTTTCCSGG--GGCCCHHHHHHHHHHHHHTTTCCC--SCCH
T ss_pred HHHHHHHHHHhcCCCcC-cccchhhhhccHHHHHHHHHHCccccccCC--CCccCHHHHHHHHHHHHHHcCCCc--cCCH
Confidence 345555433 22222 125777789999999999999999876311 112246689999999999999986 7799
Q ss_pred chhccccChhHHHH
Q psy17184 152 VDLYEKKDIAQVTN 165 (218)
Q Consensus 152 ~DL~e~kn~~qV~~ 165 (218)
+|+.++ +...++.
T Consensus 241 eDi~~~-~~k~il~ 253 (513)
T 1rt8_A 241 TAMVAG-NPKLNLA 253 (513)
T ss_dssp HHHHTT-CHHHHHH
T ss_pred HHhcCC-CHHHHHH
Confidence 999985 5544433
No 26
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.23 E-value=6.8e-11 Score=99.40 Aligned_cols=156 Identities=16% Similarity=0.148 Sum_probs=106.3
Q ss_pred HHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCc-cCCCCh-----hhHHHHHHHHHHhh
Q psy17184 10 KIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSI-AAKRNP-----EQDKEAQAWIETVT 83 (218)
Q Consensus 10 k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i-~kk~~~-----~~e~~i~~wie~~l 83 (218)
...++|+..++.....||..+++..-+...++.+.|+||++||+|+|.|.|+.+ ++++.+ .+.+|+...++.+.
T Consensus 12 ~~~~~~~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k 91 (245)
T 2wa7_A 12 AEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLD 91 (245)
T ss_dssp ---CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 346789998999999999999875323334678889999999999999999887 433221 33445443333211
Q ss_pred CC----------------------------------------------------------------CCCCccchHHhhhc
Q psy17184 84 GQ----------------------------------------------------------------KFPAGVLYEDAIKD 99 (218)
Q Consensus 84 ~~----------------------------------------------------------------~l~~~d~f~~~l~d 99 (218)
.. +++ -.+|.+.++|
T Consensus 92 ~~g~~lv~I~~~DIvdG~~kliLgLlW~li~~~~i~~~~~~~~~~~~~~~~~~~~~LL~W~~~~~~~~~-v~nFs~s~~d 170 (245)
T 2wa7_A 92 RESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLP-ITNFNQNWQD 170 (245)
T ss_dssp HTTCCCCSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCCSSCC----CCCCHHHHHHHHHHHHSTTSC-CCCSSGGGTT
T ss_pred HcCCcccCCCHHHhhCCCHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHhCCCCC-CCCCcccchh
Confidence 10 010 1257778899
Q ss_pred hhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhccccChhHHHHHHHH
Q psy17184 100 GQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKKDIAQVTNTIYA 169 (218)
Q Consensus 100 G~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~ 169 (218)
|..+|.|++.+.|+.++....- ..-...+|...-++.+++ +|+|. +..++|+.+++-=.+.++|..+
T Consensus 171 G~a~~aLi~~~~P~~i~~~~~l-~~~~~~~n~~~a~~~A~~~lGi~~--~l~peDi~~~~~d~ksi~tyvs 238 (245)
T 2wa7_A 171 GKALGALVDSCAPGLCPDWESW-DPQKPVDNAREAVQQADDWLGVPQ--VITPEEIIHPDVDEHSVMTYLS 238 (245)
T ss_dssp SHHHHHHHHHHSTTSSTTGGGS-CTTCHHHHHHHHHHHHHHHSCCCC--SSCHHHHTCTTCCHHHHHHHHT
T ss_pred hHHHHHHHHHHCcccccccccc-CcccHHHHHHHHHHHHHHhCCCCc--cCCHHHhccCCCcHHHHHHHHH
Confidence 9999999999999988543221 122456888888888886 99995 6799999986433455555443
No 27
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.21 E-value=6e-12 Score=96.93 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=30.3
Q ss_pred CChhhHHHHHHHHHHhhCCCCCCccchH--HhhhchhHH
Q psy17184 67 RNPEQDKEAQAWIETVTGQKFPAGVLYE--DAIKDGQIL 103 (218)
Q Consensus 67 ~~~~~e~~i~~wie~~l~~~l~~~d~f~--~~l~dG~iL 103 (218)
....+.+||..|++++..+++|+.+.|+ |+++.+++-
T Consensus 68 ~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~e~kn~~ 106 (136)
T 1wyp_A 68 QNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHT 106 (136)
T ss_dssp CSHHHHHHHHHHHHHHHHHTCCGGGCCCHHHHHSCSCSH
T ss_pred cchHHHHHHHHHHHHHHHcCCCcccccCchHHhcCCCHH
Confidence 3568899999999999999999988787 787765433
No 28
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.21 E-value=2.9e-11 Score=111.40 Aligned_cols=93 Identities=25% Similarity=0.359 Sum_probs=78.1
Q ss_pred CChhhHHHHHHHHHHhhCCC------CC---CccchHHhhhchhHHHHHHHhhCCCCc--ccccCCC--CccccchhHHH
Q psy17184 67 RNPEQDKEAQAWIETVTGQK------FP---AGVLYEDAIKDGQILCHLINKLKPGSV--AKINSSG--GQFKFMENINN 133 (218)
Q Consensus 67 ~~~~~e~~i~~wie~~l~~~------l~---~~d~f~~~l~dG~iLc~L~n~l~pg~i--~ki~~~~--~~f~~~eNI~~ 133 (218)
++.+++..+.+||+..++.. +| ...+|.+.|+||++||+|+|.+.|+++ ++++.++ .+|+++|||+.
T Consensus 4 ~~~~q~~~f~~WIN~~L~~~~~~~~~l~~~~~v~~l~~dL~DGv~L~~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi~~ 83 (506)
T 1pxy_A 4 GIQSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTL 83 (506)
T ss_dssp ---CTHHHHHHHHHHHHTTCTTTTTTCSCCTTSSHHHHHSTTSHHHHHHHHHHSTTSSCGGGSCCCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCccccccCCCCCchhHHHHHhcchHHHHHHHHHHcCCCCCccccCccccccHHHHHHHHHH
Confidence 45567788999999998865 22 234799999999999999999999999 6777654 37999999999
Q ss_pred HHHHHHHhCCCccCccccchhccccCh
Q psy17184 134 FQKAIKDYGVADIDVFQTVDLYEKKDI 160 (218)
Q Consensus 134 Fl~~~~~~Gv~~~~lF~~~DL~e~kn~ 160 (218)
|+++|+.+|++..++ ++.||+++++.
T Consensus 84 ~L~~~k~~g~~~~~i-~~~Dl~dg~~~ 109 (506)
T 1pxy_A 84 CLNSAKAVGCSVVNI-GTQDLAEGRPH 109 (506)
T ss_dssp HHHHHHHTTCCCTTC-CHHHHHHTCHH
T ss_pred HHHHHHHhCCCcCCC-CHHHHhcCChH
Confidence 999999999999998 99999999764
No 29
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=99.21 E-value=4e-11 Score=90.47 Aligned_cols=81 Identities=22% Similarity=0.448 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--ccc-CCCCccccchhHHHHHHHHHHhCCCccCc
Q psy17184 72 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINNFQKAIKDYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~l 148 (218)
..++..||+.+++..++.. +.|.||+++|+|++.|.||+|+ |++ .++..|..++|+..|.+++.++||+. .
T Consensus 7 r~ElL~WIN~~L~~~~~ki----E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~k--~ 80 (123)
T 2qjz_A 7 RHDMLAWINESLQLNLTKI----EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDK--I 80 (123)
T ss_dssp HHHHHHHHHHHHTCCCCCG----GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCCC--C
T ss_pred HHHHHHHHHHHHCCCCchH----HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCCC--c
Confidence 4689999999999998874 4699999999999999999999 888 78899999999999999999999996 5
Q ss_pred cccchhcccc
Q psy17184 149 FQTVDLYEKK 158 (218)
Q Consensus 149 F~~~DL~e~k 158 (218)
++.+.|.-++
T Consensus 81 i~v~kLvkgk 90 (123)
T 2qjz_A 81 IPVDKLVKGK 90 (123)
T ss_dssp CCHHHHTTCC
T ss_pred cCHHHHHcCC
Confidence 6777777776
No 30
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=4.2e-11 Score=93.92 Aligned_cols=86 Identities=20% Similarity=0.394 Sum_probs=76.5
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--ccc-CCCCccccchhHHHHHHHHHHhCCC
Q psy17184 68 NPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINNFQKAIKDYGVA 144 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~ 144 (218)
++..+.++..||+.+++..++.. +.|.||+++|+|++.|.||+|+ |++ .++..|..++|+..|.+++.++||+
T Consensus 20 ~~~sr~ElL~WIN~~L~~~~~ki----E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k~gV~ 95 (159)
T 1wyo_A 20 ENLSRHDMLAWVNDSLHLNYTKI----EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVD 95 (159)
T ss_dssp CCCCHHHHHHHHHHHSCCCCSSG----GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHHHTCC
T ss_pred CchhHHHHHHHHHHHHCCCCchh----hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHHcCCC
Confidence 45678899999999999998864 4699999999999999999999 888 7889999999999999999999999
Q ss_pred ccCccccchhccccC
Q psy17184 145 DIDVFQTVDLYEKKD 159 (218)
Q Consensus 145 ~~~lF~~~DL~e~kn 159 (218)
. .++.+.|.-++-
T Consensus 96 k--~ipV~kLvkgk~ 108 (159)
T 1wyo_A 96 K--IIPVEKLVKGKF 108 (159)
T ss_dssp C--CCCHHHHTTTCS
T ss_pred C--ccCHHHHhcCCc
Confidence 6 577788887763
No 31
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.18 E-value=3.3e-11 Score=101.88 Aligned_cols=107 Identities=14% Similarity=0.197 Sum_probs=87.3
Q ss_pred CChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCcc
Q psy17184 67 RNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADI 146 (218)
Q Consensus 67 ~~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~ 146 (218)
++..++..+.+||+..++..-+...+|.+.|+||++||+|++.+.|+.+++++.+...|+++||++.|+++++.+|++..
T Consensus 24 ~~~~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~~gv~lv 103 (254)
T 1wku_A 24 WEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASKGVKLV 103 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred chHHHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHHcCCCcc
Confidence 34466778999999998644344456888899999999999999999999887777899999999999999999999988
Q ss_pred CccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 147 DVFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 147 ~lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
.+ .+.|++++ |...++--+..|.+.-.
T Consensus 104 ~I-~~~DIvdG-~~kliLgLlW~li~~~~ 130 (254)
T 1wku_A 104 SI-GAEEIVDG-NLKMTLGMIWTIILRFA 130 (254)
T ss_dssp SC-CHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_pred CC-CHHHHhcc-chHHHHHHHHHHHHHHh
Confidence 77 99999987 56666655666655443
No 32
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.17 E-value=1.3e-10 Score=99.14 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=84.2
Q ss_pred ccCCCChhhHHHHHHHHHHhhCC--------CCCC-ccchHHhhhchhHHHHHHHhhCCCCcc--cccCCC-Cccccchh
Q psy17184 63 IAAKRNPEQDKEAQAWIETVTGQ--------KFPA-GVLYEDAIKDGQILCHLINKLKPGSVA--KINSSG-GQFKFMEN 130 (218)
Q Consensus 63 i~kk~~~~~e~~i~~wie~~l~~--------~l~~-~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~~~~-~~f~~~eN 130 (218)
+..+++.+++..+.+||+..++. ++++ ..+|.+.|+||++||+|++.+.|+.++ +++.++ ..|+++||
T Consensus 17 ~~~~~~~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eN 96 (275)
T 1aoa_A 17 TQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQEN 96 (275)
T ss_dssp ----CCHHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHH
Confidence 35678889999999999999875 3322 346888899999999999999999987 666654 47899999
Q ss_pred HHHHHHHHHHhCCCccCccccchhccccChhHHHHHHHHHHh
Q psy17184 131 INNFQKAIKDYGVADIDVFQTVDLYEKKDIAQVTNTIYALGR 172 (218)
Q Consensus 131 I~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L~r 172 (218)
++.|+++++.+|++...+ .+.|+++++ ...++--+..+.+
T Consensus 97 v~~aL~~~k~~g~~l~~I-~~~DIvdg~-~~liLgLlw~li~ 136 (275)
T 1aoa_A 97 LNLALNSASAIGCHVVNI-GAEDLRAGK-PHLVLGLLWQIIK 136 (275)
T ss_dssp HHHHHHHHHHTTCCCTTC-CHHHHHTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccCC-CHHHHHcCc-HHHHHHHHHHHHH
Confidence 999999999999998876 999999985 4444444445544
No 33
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.07 E-value=5.9e-10 Score=93.57 Aligned_cols=153 Identities=15% Similarity=0.242 Sum_probs=104.1
Q ss_pred ccCChhHHHHHHHHHHHHhCCC----CC-CchhHHHHhhhhhHHHhhhhhccCCCccCCCC---hhh-------------
Q psy17184 13 AKRNPEQDKEAQAWIETVTGQK----FP-AGVLYEDAIKDGQILCHLINKLKPGSIAAKRN---PEQ------------- 71 (218)
Q Consensus 13 ~ky~~~~~~e~~~Wie~~~g~~----i~-~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~---~~~------------- 71 (218)
.+++...+....+||...++++ ++ ...++.+.|+||++||+|++.+.|+.+++... ..+
T Consensus 7 ~e~~~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k~ 86 (245)
T 1sh5_A 7 DERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLRH 86 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCCCCcchHHHHHhHHHHHHHHHH
Confidence 3445666778999999999874 33 23568888999999999999999887754221 011
Q ss_pred ------------------------------------------------HHHHHHHHHHhhC-C-CCCCccchHHhhhchh
Q psy17184 72 ------------------------------------------------DKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQ 101 (218)
Q Consensus 72 ------------------------------------------------e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~ 101 (218)
++.+..|+...+. + +++ -.+|...++||.
T Consensus 87 ~g~~l~~I~~~DIvdg~~k~iLgLlw~li~~~~i~~i~~~g~~~~~~~~~~LL~W~~~~~~~~~~~~-v~nF~~s~~DG~ 165 (245)
T 1sh5_A 87 RQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLR-CDNFTTSWRDGR 165 (245)
T ss_dssp TTCCCCSCCHHHHHTTCHHHHHHHHHHHHHHHTTTTCCCTTCCSSCCHHHHHHHHHHHHTTTSTTCC-CCCSSGGGTTSH
T ss_pred cCCcccCCChHhhhcccHHHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHHhccCCCcc-cCCccccccchH
Confidence 1235566665443 2 232 235778899999
Q ss_pred HHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhcccc-ChhHHHHHHHHH
Q psy17184 102 ILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKK-DIAQVTNTIYAL 170 (218)
Q Consensus 102 iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~k-n~~qV~~~l~~L 170 (218)
++|.|++.+.|+.++--.-. +-...+|....++.+++ +|+|. +..++|+.+.+ +...|+.-+..|
T Consensus 166 a~~aLi~~~~P~~i~~~~l~--~~~~~~n~~~a~~~a~~~lGi~~--~l~peDi~~~~pd~k~i~tyva~l 232 (245)
T 1sh5_A 166 LFNAIIHRHKPMLIDMNKVY--RQTNLENLDQAFSVAERDLGVTR--LLDPEDVDVPQPDEKSIITYVSSL 232 (245)
T ss_dssp HHHHHHHTTCTTTCCHHHHH--HSCHHHHHHHHHHHHHHHHCCCC--CCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHcc--cCCHHHHHHHHHHHHHHhCCCCc--cCCHHHhccCCCcHHHHHHHHHHH
Confidence 99999999999987621100 11356899999999985 99995 67899997654 434443333333
No 34
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.03 E-value=1.1e-09 Score=101.19 Aligned_cols=108 Identities=25% Similarity=0.314 Sum_probs=84.7
Q ss_pred CCCChhhHHHHHHHHHHhhCCC--------CCC-ccchHHhhhchhHHHHHHHhhCCCCcc--cccC-----CCCccccc
Q psy17184 65 AKRNPEQDKEAQAWIETVTGQK--------FPA-GVLYEDAIKDGQILCHLINKLKPGSVA--KINS-----SGGQFKFM 128 (218)
Q Consensus 65 kk~~~~~e~~i~~wie~~l~~~--------l~~-~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~~-----~~~~f~~~ 128 (218)
.+|+++++..+.+||+..++.. +++ ..+|.+.|+||++||+|+|.+.|+++. +++. +...|+++
T Consensus 7 ~~~~~~q~~~f~~WIN~~L~~~~~~~~~lpi~~~v~dl~~dL~DG~~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~~~~ 86 (513)
T 1rt8_A 7 HTINEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKCI 86 (513)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCTTTGGGCSCCTTSTHHHHHTTTSHHHHHHHHHHSTTSSCGGGSCCCC---CCCHHHHH
T ss_pred CcccHHHHHHHHHHHHHhccCCccccccCCCCCchHHHHHHhhcHHHHHHHHHHHcCCCcchhhcCCccccCcccHHHHH
Confidence 4678889999999999998864 222 247889999999999999999999884 5654 34689999
Q ss_pred hhHHHHHHHHHHhCCCccCccccchhccccChhHHHHHHHHHHhh
Q psy17184 129 ENINNFQKAIKDYGVADIDVFQTVDLYEKKDIAQVTNTIYALGRE 173 (218)
Q Consensus 129 eNI~~Fl~~~~~~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~ 173 (218)
||++.|+++++.+|++...-|++.|+++++ ...++--+..+.+.
T Consensus 87 eNi~~~L~~~k~~g~~~l~~i~~~DI~dg~-~~liLgLiW~li~~ 130 (513)
T 1rt8_A 87 ENNNVVINSAKAMGGISITNIGAGDILEGR-EHLILGLVWQIIRR 130 (513)
T ss_dssp HHHHHHHHHHHHHSSCCCSSCCHHHHHTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccCCcCHHhhhcCC-HHHHHHHHHHHHHH
Confidence 999999999999999777779999999985 33444444444443
No 35
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.03 E-value=4.6e-10 Score=96.78 Aligned_cols=152 Identities=16% Similarity=0.232 Sum_probs=103.1
Q ss_pred HHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCC---hhhH--------------
Q psy17184 10 KIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRN---PEQD-------------- 72 (218)
Q Consensus 10 k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~---~~~e-------------- 72 (218)
|++++++..++.....||...+++.-+...++.+.|+||++||+|++.|.|+.+++... ..+.
T Consensus 65 ~~~~e~~~vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~~~~~r~~kleNvn~aL~~lk~~g 144 (296)
T 3f7p_A 65 RIADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLRHRQ 144 (296)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCcccccCCcChhhhhhhHHHHHHHHHHhC
Confidence 44556666688899999999987543333567888999999999999999988754321 1122
Q ss_pred -----------------------------------------------HHHHHHHHHhhC-C-CCCCccchHHhhhchhHH
Q psy17184 73 -----------------------------------------------KEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQIL 103 (218)
Q Consensus 73 -----------------------------------------------~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iL 103 (218)
+.+..|+...+. + +++ -.+|...++||.++
T Consensus 145 v~lv~I~~~DIvdGn~kliLgLlW~Li~~~~i~~i~~~g~~~~~s~k~~LL~W~n~~~~~y~~v~-I~nFs~sw~DG~af 223 (296)
T 3f7p_A 145 VKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLR-CDNFTSSWRDGRLF 223 (296)
T ss_dssp CCCTTCCHHHHHTTCHHHHHHHHHHHHHHHTTTTCCCSSCCTTSCHHHHHHHHHHHHTTTSTTCC-CCCSSGGGTTSHHH
T ss_pred ccccCCChhhhhccchHHHHHHHHHhhcccceeeeeccCCcccCCHHHHHHHHHHHHhcCCCCCc-CCCccccccccHHH
Confidence 234455554432 2 222 13577889999999
Q ss_pred HHHHHhhCCCCcccccCCCCccccchhHHHHHHHH-HHhCCCccCccccchhccccChhHHHHH
Q psy17184 104 CHLINKLKPGSVAKINSSGGQFKFMENINNFQKAI-KDYGVADIDVFQTVDLYEKKDIAQVTNT 166 (218)
Q Consensus 104 c~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~-~~~Gv~~~~lF~~~DL~e~kn~~qV~~~ 166 (218)
|.|++.+.|+.+.--.-. +-...+|...-++.+ +++|+|. +..++|+...+--.+.++|
T Consensus 224 ~aLI~~~~P~lid~~~l~--~~~~~~N~~~Af~~Ae~~LGi~~--ll~pEDi~~~~pDeksimt 283 (296)
T 3f7p_A 224 NAIIHRHKPLLIDMNKVY--RQTNLENLDQAFSVAERDLGVTR--LLDPEDVDVPQPDEKSIIT 283 (296)
T ss_dssp HHHHHHHCGGGCCHHHHT--TSCHHHHHHHHHHHHHHHHCCCC--CCCHHHHSSSSCCHHHHHH
T ss_pred HHHHHHHCcCccCHHHcC--cccHHHHHHHHHHHHHHhCCCCc--cCCHHHhcCCCCcHHHHHH
Confidence 999999999977521101 113568999988888 5799986 6789998765322333333
No 36
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=98.98 E-value=1.1e-09 Score=91.97 Aligned_cols=107 Identities=10% Similarity=0.084 Sum_probs=83.4
Q ss_pred CCChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCc-ccccCC-CCccccchhHHHHHHHHHHhCC
Q psy17184 66 KRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-AKINSS-GGQFKFMENINNFQKAIKDYGV 143 (218)
Q Consensus 66 k~~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i-~ki~~~-~~~f~~~eNI~~Fl~~~~~~Gv 143 (218)
.+...++..+.+||+..++..-+...++.+.|+||++||+|++.+.|+.+ ++++.+ ...|+.+||++.++++++.+|+
T Consensus 16 ~~~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k~~g~ 95 (245)
T 2wa7_A 16 PWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESI 95 (245)
T ss_dssp GGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 34567788999999998863223333566779999999999999999988 677654 5778999999999999999999
Q ss_pred CccCccccchhccccChhHHHHHHHHHHhhh
Q psy17184 144 ADIDVFQTVDLYEKKDIAQVTNTIYALGREV 174 (218)
Q Consensus 144 ~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~ 174 (218)
+...+ .+.|+++++ ...++--+..|.+.-
T Consensus 96 ~lv~I-~~~DIvdG~-~kliLgLlW~li~~~ 124 (245)
T 2wa7_A 96 KLVSI-DSKAIVDGN-LKLILGLVWTLILHY 124 (245)
T ss_dssp CCCSC-CHHHHHTTC-HHHHHHHHHHHHHHH
T ss_pred cccCC-CHHHhhCCC-HHHHHHHHHHHHHHH
Confidence 98777 899999984 445555555555443
No 37
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=98.96 E-value=1.8e-09 Score=90.69 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=104.7
Q ss_pred HHccCChhHHHHHHHHHHHHhCCCC-CCchhHHHHhhhhhHHHhhhhhccCCCccCCCC---hhh---------------
Q psy17184 11 IAAKRNPEQDKEAQAWIETVTGQKF-PAGVLYEDAIKDGQILCHLINKLKPGSIAAKRN---PEQ--------------- 71 (218)
Q Consensus 11 ~~~ky~~~~~~e~~~Wie~~~g~~i-~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~---~~~--------------- 71 (218)
.+++++...+.....||...+++.. ++..++.+.|+||++||+|+|.|.|+++++... ..+
T Consensus 9 ~~~e~~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k~~g 88 (246)
T 1dxx_A 9 DSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNN 88 (246)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCCCccHHHHHHHHHHHHHHHHHcC
Confidence 3567788888899999999987542 334568888999999999999998877654210 011
Q ss_pred ------------------------------------------------HHHHHHHHHHhhC-C-CCCCccchHHhhhchh
Q psy17184 72 ------------------------------------------------DKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQ 101 (218)
Q Consensus 72 ------------------------------------------------e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~ 101 (218)
++.+..|+...+. + +++ -.+|...+.||.
T Consensus 89 ~~l~~I~~~DIvdg~~~liL~Llw~li~~~~i~~~~~e~~~~~~~~~~~~~LL~W~~~~~~~~~~~~-i~nFs~s~~DG~ 167 (246)
T 1dxx_A 89 VDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVN-VINFTTSWSDGL 167 (246)
T ss_dssp CCCTTCCHHHHHTTCHHHHHHHHHHHHHHHTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTCC-CCSSSGGGTTSH
T ss_pred CccccCCHHHhhcccHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccHHHHHHHHHHHHhccCCCCC-cCCCcccchhHH
Confidence 1234567766543 3 222 236888899999
Q ss_pred HHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHH-HhCCCccCccccchhccccChhHHHHHH
Q psy17184 102 ILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIK-DYGVADIDVFQTVDLYEKKDIAQVTNTI 167 (218)
Q Consensus 102 iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~-~~Gv~~~~lF~~~DL~e~kn~~qV~~~l 167 (218)
++|.|++.+.|+.++--... ..-...+|....++.++ ++|+|. +..++|+.+.+-=.+.++|.
T Consensus 168 a~~aLi~~~~P~li~~~~~~-~~~~~~~n~~~a~~~A~~~lGi~~--~l~peDi~~~~pD~k~i~ty 231 (246)
T 1dxx_A 168 ALNALIHSHRPDLFDWNSVV-SQQSATQRLEHAFNIARYQLGIEK--LLDPEDVDTTYPDKKSILMY 231 (246)
T ss_dssp HHHHHHHHHCGGGSCHHHHH-TCCCHHHHHHHHHHHHHHTTCCCC--CCCHHHHSSSSCCHHHHHHH
T ss_pred HHHHHHHHHCcCccchhhhc-ccCCHHHHHHHHHHHHHHhCCCCc--cCCHHHhhcCCCcHHHHHHH
Confidence 99999999999877521100 01234688888888887 799995 67999997654222444443
No 38
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=1.1e-09 Score=83.40 Aligned_cols=94 Identities=13% Similarity=0.184 Sum_probs=70.3
Q ss_pred HHHHccCChhHHHHHHHHHHHHhCCCC-C-CchhHHHHhhhhhHHHhhhhhccCCCccCCCC-----hhhHHHHHHHHHH
Q psy17184 9 AKIAAKRNPEQDKEAQAWIETVTGQKF-P-AGVLYEDAIKDGQILCHLINKLKPGSIAAKRN-----PEQDKEAQAWIET 81 (218)
Q Consensus 9 ~k~~~ky~~~~~~e~~~Wie~~~g~~i-~-~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~-----~~~e~~i~~wie~ 81 (218)
.+..++++.+.+.....||+..+++.- + ...+|.+.|+||++||+|+|.|.|+++++++. ..+.+|+..+++.
T Consensus 9 ~~~~~~~~~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~~~~~~p~~~~~~~eNv~~aL~~ 88 (129)
T 2yrn_A 9 RKPVIHGLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACLNF 88 (129)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCTTCCSSCCSTTHHHHHHHHHHHH
T ss_pred hcccchhhHHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcccccCCCCcHHHHHHHHHHHHHH
Confidence 345678888888899999999987642 2 23579999999999999999999999976542 2568899988888
Q ss_pred hhCCCCCCccchHHhhhchhH
Q psy17184 82 VTGQKFPAGVLYEDAIKDGQI 102 (218)
Q Consensus 82 ~l~~~l~~~d~f~~~l~dG~i 102 (218)
+..++++..+...+-+-||+.
T Consensus 89 ~~~~gv~~~~i~~~DI~dgn~ 109 (129)
T 2yrn_A 89 LAAKGINIQGLSAEEIRNGNL 109 (129)
T ss_dssp HHHHTCCCTTCCHHHHHHTCH
T ss_pred HHHhCCcccCCChhhhhcCCH
Confidence 766666544333444446763
No 39
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=1.7e-09 Score=84.75 Aligned_cols=73 Identities=11% Similarity=0.216 Sum_probs=60.5
Q ss_pred cCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc--CCC-C----hhhHHHHHHHHHHhhCCC
Q psy17184 14 KRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA--AKR-N----PEQDKEAQAWIETVTGQK 86 (218)
Q Consensus 14 ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~-~----~~~e~~i~~wie~~l~~~ 86 (218)
+.+.+.+.|++.||+++++.+++.. +.|+||+++|+|+|.|.|++|+ +++ . .+.++|+..+.+.+..++
T Consensus 18 ~~~~~sr~ElL~WIN~~L~~~~~ki----E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k~g 93 (159)
T 1wyo_A 18 TSENLSRHDMLAWVNDSLHLNYTKI----EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMG 93 (159)
T ss_dssp CCCCCCHHHHHHHHHHHSCCCCSSG----GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCchhHHHHHHHHHHHHCCCCchh----hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHHcC
Confidence 3456678899999999999999763 5799999999999999999997 554 3 367888888888888888
Q ss_pred CCCc
Q psy17184 87 FPAG 90 (218)
Q Consensus 87 l~~~ 90 (218)
|+..
T Consensus 94 V~k~ 97 (159)
T 1wyo_A 94 VDKI 97 (159)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7764
No 40
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=98.93 E-value=2e-09 Score=90.47 Aligned_cols=105 Identities=14% Similarity=0.200 Sum_probs=82.4
Q ss_pred CCCChhhHHHHHHHHHHhhCCC-CCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCC
Q psy17184 65 AKRNPEQDKEAQAWIETVTGQK-FPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGV 143 (218)
Q Consensus 65 kk~~~~~e~~i~~wie~~l~~~-l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv 143 (218)
..+...++..+.+||+..+... .|+..+|.+.|+||++||+|++.+.|+.+++.+ +...|+++||++.++++++.+|+
T Consensus 11 ~e~~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~-~~~~~~~~eNv~~aL~~~k~~g~ 89 (246)
T 1dxx_A 11 YEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEK-GSTRVHALNNVNKALRVLQNNNV 89 (246)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCC-CSSHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCC-CccHHHHHHHHHHHHHHHHHcCC
Confidence 3455677888999999987643 344445777789999999999999999888753 45789999999999999999999
Q ss_pred CccCccccchhccccChhHHHHHHHHHHh
Q psy17184 144 ADIDVFQTVDLYEKKDIAQVTNTIYALGR 172 (218)
Q Consensus 144 ~~~~lF~~~DL~e~kn~~qV~~~l~~L~r 172 (218)
+... +.+.|++++. ...++.-+..+.+
T Consensus 90 ~l~~-I~~~DIvdg~-~~liL~Llw~li~ 116 (246)
T 1dxx_A 90 DLVN-IGSTDIVDGN-HKLTLGLIWNIIL 116 (246)
T ss_dssp CCTT-CCHHHHHTTC-HHHHHHHHHHHHH
T ss_pred cccc-CCHHHhhccc-HHHHHHHHHHHHH
Confidence 9877 6999999984 4444444445544
No 41
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=98.92 E-value=2.5e-09 Score=80.59 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc--CCC-Ch----hhHHHHHHHHHHhhCCCCCCc
Q psy17184 20 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA--AKR-NP----EQDKEAQAWIETVTGQKFPAG 90 (218)
Q Consensus 20 ~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~-~~----~~e~~i~~wie~~l~~~l~~~ 90 (218)
-.|++.||+++++.+++.. +.|+||+++|+|+|.|.|++|+ +++ .+ +.++|+..+.+++..++++..
T Consensus 7 r~ElL~WIN~~L~~~~~ki----E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~k~ 80 (123)
T 2qjz_A 7 RHDMLAWINESLQLNLTKI----EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI 80 (123)
T ss_dssp HHHHHHHHHHHHTCCCCCG----GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHCCCCchH----HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCCCc
Confidence 3689999999999999764 5799999999999999999997 554 33 567888888888877777664
No 42
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=98.89 E-value=4.1e-10 Score=91.24 Aligned_cols=53 Identities=28% Similarity=0.478 Sum_probs=46.2
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCc--ccccCC
Q psy17184 68 NPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKINSS 121 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i--~ki~~~ 121 (218)
.+.. +++..||+.+++..+|+.++|.+.|+||++||+|+|.+.|+++ ++|+.+
T Consensus 24 ~~~~-~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~ 78 (190)
T 2rr8_A 24 LCHL-EEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDR 78 (190)
T ss_dssp HHHH-HHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTT
T ss_pred cHHH-HHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCccccccccc
Confidence 3344 8999999999999998767899999999999999999999998 477654
No 43
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=98.89 E-value=2.1e-09 Score=87.18 Aligned_cols=50 Identities=30% Similarity=0.539 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--cccCC
Q psy17184 72 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSS 121 (218)
Q Consensus 72 e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~~~ 121 (218)
.++++.||+.+++..+|+.++|.+.|+||++||+|+|.+.|++++ +|+.+
T Consensus 49 ~~e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~ 100 (193)
T 3i6x_A 49 LEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDR 100 (193)
T ss_dssp HHHHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTT
T ss_pred HHHHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCc
Confidence 348999999999999998778999999999999999999999996 77654
No 44
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=98.87 E-value=1.9e-08 Score=85.78 Aligned_cols=153 Identities=16% Similarity=0.205 Sum_probs=100.9
Q ss_pred HHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCc-cCCCC-h----hhHHHHHH-------
Q psy17184 11 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSI-AAKRN-P----EQDKEAQA------- 77 (218)
Q Consensus 11 ~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i-~kk~~-~----~~e~~i~~------- 77 (218)
..+++..-.+.-...||...+...-+.-.++.+.|+||++||+|++.|.|+.+ ++++. + ...+|+..
T Consensus 40 ~d~~w~~vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~lk~ 119 (272)
T 3hoc_A 40 EDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDR 119 (272)
T ss_dssp --CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred hChhHHHHHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHHHH
Confidence 34555555566788999998754212234688999999999999999998887 43321 1 22333332
Q ss_pred ----------------------------------------------------------HHHHhhCCCCCCccchHHhhhc
Q psy17184 78 ----------------------------------------------------------WIETVTGQKFPAGVLYEDAIKD 99 (218)
Q Consensus 78 ----------------------------------------------------------wie~~l~~~l~~~d~f~~~l~d 99 (218)
|+...+. +++ -.+|.+.++|
T Consensus 120 ~gv~lvnI~~~DIvdGn~kliLgLlW~Li~~~~i~~l~~~~e~~~~~~~~s~k~~LL~W~n~~~~-~~~-I~nFs~sw~D 197 (272)
T 3hoc_A 120 ESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLP-QLP-ITNFSRDWQS 197 (272)
T ss_dssp TTCCCSSCCHHHHHTTCHHHHHHHHHHHHHHHHTTCC------------CCHHHHHHHHHHHHCT-TSC-CCCSSGGGTT
T ss_pred cCCcccccccchhhcCCHHHHHHHHHHHHHHHhhhhhhccccccccccccCHHHHHHHHHHhhCC-CCC-CCChhhcccc
Confidence 2222111 111 1257778899
Q ss_pred hhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhccccChhHHHHHHH
Q psy17184 100 GQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKKDIAQVTNTIY 168 (218)
Q Consensus 100 G~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~kn~~qV~~~l~ 168 (218)
|..+|.|++.+.|+.++....- .+-...+|...-++.+++ +|+|. +.+++|+.+.+-=.+.++|..
T Consensus 198 G~af~aLi~~~~P~li~d~~~l-~~~~~~~n~~~Af~~Ae~~lGi~~--ll~peDiv~~~pD~ksimtYv 264 (272)
T 3hoc_A 198 GRALGALVDSCAPGLCPDWDSW-DASKPVTNAREAMQQADDWLGIPQ--VITPEEIVDPNVDKHSVMTYL 264 (272)
T ss_dssp SHHHHHHHHHHSTTSSTTGGGS-CTTCHHHHHHHHHHHHHHHHCCCC--SSCHHHHTCTTCCHHHHHHHH
T ss_pred hHHHHHHHHHhCcccccchhhc-CccCHHHHHHHHHHHHHHhCCCCc--cCCHHHhccCCCChHHHHHHH
Confidence 9999999999999988543321 123467899999998887 99995 779999998643445555543
No 45
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=98.86 E-value=8e-09 Score=86.63 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=81.9
Q ss_pred ChhhHHHHHHHHHHhhCCC----CC-CccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhC
Q psy17184 68 NPEQDKEAQAWIETVTGQK----FP-AGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYG 142 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~----l~-~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~G 142 (218)
...++..+.+||+..++.. ++ ...+|.+.|+||++||+|++.+.|+.+++. .+.+.|+++||++.++++++..|
T Consensus 10 ~~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~-~~~~~~~~~eNv~~aL~~~k~~g 88 (245)
T 1sh5_A 10 DRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE-KGRMRFHKLQNVQIALDYLRHRQ 88 (245)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-CCCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCC-CCcchHHHHHhHHHHHHHHHHcC
Confidence 3456778899999998763 22 223577778999999999999999998864 34578999999999999999999
Q ss_pred CCccCccccchhccccChhHHHHHHHHHHhhh
Q psy17184 143 VADIDVFQTVDLYEKKDIAQVTNTIYALGREV 174 (218)
Q Consensus 143 v~~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~ 174 (218)
++..++ .+.|++++. ...++.-+..|.+.-
T Consensus 89 ~~l~~I-~~~DIvdg~-~k~iLgLlw~li~~~ 118 (245)
T 1sh5_A 89 VKLVNI-RNDDIADGN-PKLTLGLIWTIILHF 118 (245)
T ss_dssp CCCCSC-CHHHHHTTC-HHHHHHHHHHHHHHH
T ss_pred CcccCC-ChHhhhccc-HHHHHHHHHHHHHhh
Confidence 998887 899999984 455555556665543
No 46
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.85 E-value=5.5e-09 Score=101.25 Aligned_cols=154 Identities=15% Similarity=0.192 Sum_probs=106.0
Q ss_pred HccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCCCh----hhHHHH------------
Q psy17184 12 AAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKRNP----EQDKEA------------ 75 (218)
Q Consensus 12 ~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~~~----~~e~~i------------ 75 (218)
.++|++..+.....||..+++..-++..++.+.|+||++||+|++.|.|+.+++...+ .+.+|+
T Consensus 2 ~~~~~~~q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~~g~ 81 (863)
T 1sjj_A 2 DPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGV 81 (863)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHHcCC
Confidence 4688888899999999999865433334688899999999999999999988664321 223333
Q ss_pred ---------------------------------------------HHHHHHhh-CC-CCCCccchHHhhhchhHHHHHHH
Q psy17184 76 ---------------------------------------------QAWIETVT-GQ-KFPAGVLYEDAIKDGQILCHLIN 108 (218)
Q Consensus 76 ---------------------------------------------~~wie~~l-~~-~l~~~d~f~~~l~dG~iLc~L~n 108 (218)
..|+...+ ++ +++ -.+|.+.+.||.++|.|++
T Consensus 82 ~~~~i~~~di~~g~~~~~l~l~w~l~~~~~~~~~~~~~~~~~~~ll~W~~~~~~~~~~~~-v~nf~~s~~dg~~~~~li~ 160 (863)
T 1sjj_A 82 KLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWYQRKTAPYKNVN-IQNFHISWKDGLGFCALIH 160 (863)
T ss_dssp CCTTCCSHHHHTTCHHHHHHHHHHHHSCCCCCCCCCCCCCSTTTTHHHHHHHHTTSTTCC-CCSSSGGGTTSHHHHHHHH
T ss_pred ccCCCChHHhhcCCHHHHHHHHHHHHHHHhhcccchhccchHHHHHHHHHHhccCCCCCC-CCCCccccccHHHHHHHHH
Confidence 34444333 12 122 2357888999999999999
Q ss_pred hhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhcccc--ChhHHHHHHHHH
Q psy17184 109 KLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKK--DIAQVTNTIYAL 170 (218)
Q Consensus 109 ~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~k--n~~qV~~~l~~L 170 (218)
.+.|+.++--.-. +-...+|....++.+++ +|+|. +..+.|+.+.. +-..|+..+..+
T Consensus 161 ~~~p~~~~~~~~~--~~~~~~n~~~a~~~a~~~lg~~~--~l~~ed~~~~~~pd~~~~~~y~~~l 221 (863)
T 1sjj_A 161 RHRPELIDYGKLR--KDDPLTNLNTAFDVAEKYLDIPK--MLDAEDIVGTARPDEKAIMTYVSSF 221 (863)
T ss_dssp TTCCSSSCSGGGG--SCCCGGGCTHHHHHHHHHHCCCC--SCCHHHHTTCSSCCHHHHHHHHHHT
T ss_pred HhCCCCcChhhCC--CCCHHHHHHHHHHHHHHhCCCCC--ccCHHHHhCCCCCcHHHHHHHHHHH
Confidence 9999988521111 12355788888888875 99985 77999998754 334444444433
No 47
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=98.81 E-value=6.5e-09 Score=89.59 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=82.5
Q ss_pred hhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCcc
Q psy17184 70 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVF 149 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF 149 (218)
.++..+.+||+..+...-+...++.+-|+||++||+|++.+.|+.+++. .+.+.|+.+||++.+|++++..|++...+
T Consensus 73 vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~-~~~~r~~kleNvn~aL~~lk~~gv~lv~I- 150 (296)
T 3f7p_A 73 VQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE-KGRMRFHKLQNVQIALDYLRHRQVKLVNI- 150 (296)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-CCSSHHHHHHHHHHHHHHHHHTTCCCTTC-
T ss_pred HHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCccccc-CCcChhhhhhhHHHHHHHHHHhCccccCC-
Confidence 4677889999998864323333566679999999999999999999874 45578999999999999999999988766
Q ss_pred ccchhccccChhHHHHHHHHHHhhhh
Q psy17184 150 QTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 150 ~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
.+.|+.++ |...++--|..|.+.-+
T Consensus 151 ~~~DIvdG-n~kliLgLlW~Li~~~~ 175 (296)
T 3f7p_A 151 RNDDIADG-NPKLTLGLIWTIILHFQ 175 (296)
T ss_dssp CHHHHHTT-CHHHHHHHHHHHHHHHT
T ss_pred Chhhhhcc-chHHHHHHHHHhhcccc
Confidence 78899988 66777767777766543
No 48
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.62 E-value=3.2e-08 Score=95.91 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=86.3
Q ss_pred CCCChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCC
Q psy17184 65 AKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVA 144 (218)
Q Consensus 65 kk~~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~ 144 (218)
+.+.+.++..+..||+..++..-++..++.+-|+||++||+|++.+.|+.+++++.+...|.+.+|++.++++++..|++
T Consensus 3 ~~~~~~q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~~g~~ 82 (863)
T 1sjj_A 3 PAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVK 82 (863)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHHcCCc
Confidence 34556778889999999875322333457778999999999999999999998777778999999999999999999998
Q ss_pred ccCccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 145 DIDVFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 145 ~~~lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
...+ .+.|++++ |...++--+..|.+.-.
T Consensus 83 ~~~i-~~~di~~g-~~~~~l~l~w~l~~~~~ 111 (863)
T 1sjj_A 83 LVSI-GAEEIVDG-NVKMTLGMIWTIILRFA 111 (863)
T ss_dssp CTTC-CSHHHHTT-CHHHHHHHHHHHHSCCC
T ss_pred cCCC-ChHHhhcC-CHHHHHHHHHHHHHHHh
Confidence 7766 88899988 55656555666654443
No 49
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=98.44 E-value=1.7e-06 Score=76.03 Aligned_cols=145 Identities=18% Similarity=0.216 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCC--Ch----hhHHHH-------------------
Q psy17184 21 KEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKR--NP----EQDKEA------------------- 75 (218)
Q Consensus 21 ~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~--~~----~~e~~i------------------- 75 (218)
.-...||...+...-+.-.++..-|+||++||+|++.|.+..+.+.+ .+ ...+|+
T Consensus 20 ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~g~~lv~i~~ 99 (347)
T 4b7l_A 20 NTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVSIDS 99 (347)
T ss_dssp HHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSSCCH
T ss_pred HHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHhccccCCCCc
Confidence 34678999887432122245788899999999999999887775432 11 122222
Q ss_pred ----------------------------------------------HHHHHHhhCCCCCCccchHHhhhchhHHHHHHHh
Q psy17184 76 ----------------------------------------------QAWIETVTGQKFPAGVLYEDAIKDGQILCHLINK 109 (218)
Q Consensus 76 ----------------------------------------------~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~ 109 (218)
..|+...+. +++ -.+|-..++||..+|.|++.
T Consensus 100 ~DIvdGn~~liLgLiW~li~~~~i~~~~~~~~~~~~~~~~~~k~~LL~W~~~~~~-~~~-v~nF~~sw~DG~af~aLi~~ 177 (347)
T 4b7l_A 100 KAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIP-YLP-ITNFNQNWQDGKALGALVDS 177 (347)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTSSCCC-------CCCCHHHHHHHHHHHHCT-TSC-CCCSSGGGTTSHHHHHHHHH
T ss_pred chhhcCCHhhHHHHHHHHHHHHhhhhhhcccccchhhhhhhHHHHHHHHHHhhCC-Ccc-cCCCCCCccchHHHHHHHHH
Confidence 233332211 111 12577789999999999999
Q ss_pred hCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCccccchhccccChhHHHHHHHHH
Q psy17184 110 LKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDVFQTVDLYEKKDIAQVTNTIYAL 170 (218)
Q Consensus 110 l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~lF~~~DL~e~kn~~qV~~~l~~L 170 (218)
+.|+.++....- ..-...+|...-++.+++ +|+|. +.+++|+...+-=.+.++|-.+-
T Consensus 178 ~~P~~~~d~~~l-~~~~~~~n~~~Af~~Ae~~lGip~--ll~peDi~~~~pDeksimtYvs~ 236 (347)
T 4b7l_A 178 CAPGLCPDWESW-DPQKPVDNAREAMQQADDWLGVPQ--VITPEEIIHPDVDEHSVMTYLSQ 236 (347)
T ss_dssp HSTTSSTTGGGS-CTTCHHHHHHHHHHHHHHHHCCCC--SSCHHHHTCTTCCHHHHHHHHTT
T ss_pred hCCccccchhhc-CcCCHHHHHHHHHHHHHHhcCCCc--ccCHHHcCCCCCChhHHHHHHHH
Confidence 999988643321 122456788877777764 99996 77999998765334666665554
No 50
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=98.43 E-value=6.2e-07 Score=76.35 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=79.8
Q ss_pred hhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCc-ccccCC-CCccccchhHHHHHHHHHHhCCCccC
Q psy17184 70 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-AKINSS-GGQFKFMENINNFQKAIKDYGVADID 147 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i-~ki~~~-~~~f~~~eNI~~Fl~~~~~~Gv~~~~ 147 (218)
.+...+.+||...+...-+...++.+-|+||++||+|++.+.|+.+ ++++.+ ...|+..+|++.++++++..|++...
T Consensus 47 vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~lk~~gv~lvn 126 (272)
T 3hoc_A 47 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVS 126 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHHHHcCCcccc
Confidence 4566789999998653212233577889999999999999999988 677653 46788999999999999999998876
Q ss_pred ccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 148 VFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 148 lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
+ .+.|+.++ |...++--|..|-+.-+
T Consensus 127 I-~~~DIvdG-n~kliLgLlW~Li~~~~ 152 (272)
T 3hoc_A 127 I-DSKAIVDG-NLKLILGLIWTLILHYS 152 (272)
T ss_dssp C-CHHHHHTT-CHHHHHHHHHHHHHHHH
T ss_pred c-ccchhhcC-CHHHHHHHHHHHHHHHh
Confidence 6 78899887 45556656666655443
No 51
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=98.34 E-value=2.3e-06 Score=65.07 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHhhC-CCCCCccchHHhhhchhHHHHHHHhhCCCCcc--cccC-CCCccccchhHHHHHHHHHHhCCCcc
Q psy17184 71 QDKEAQAWIETVTG-QKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINS-SGGQFKFMENINNFQKAIKDYGVADI 146 (218)
Q Consensus 71 ~e~~i~~wie~~l~-~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~~-~~~~f~~~eNI~~Fl~~~~~~Gv~~~ 146 (218)
++.....|+...+. .+++- .++..-|+||++||+|++.+.|..++ +++. |...|+..||++.-++++++.|++..
T Consensus 23 q~ktft~WiN~~L~~~~~~v-~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~~gi~l~ 101 (131)
T 2vzc_A 23 VKKTLITFVNKHLNKLNLEV-TELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKP 101 (131)
T ss_dssp HHHHHHHHHHHHHGGGTCCC-CCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHcCCcc-cCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHHcCCCcC
Confidence 45678899999765 45543 35778899999999999999998776 4543 55789999999999999999999877
Q ss_pred CccccchhccccChhHHHHHHHHHH
Q psy17184 147 DVFQTVDLYEKKDIAQVTNTIYALG 171 (218)
Q Consensus 147 ~lF~~~DL~e~kn~~qV~~~l~~L~ 171 (218)
.+ .+.|+.++. ...++--+..|-
T Consensus 102 ~I-~~~DIvdGn-~kliLgLiW~li 124 (131)
T 2vzc_A 102 KP-RPEDIVNCD-LKSTLRVLYNLF 124 (131)
T ss_dssp SS-CHHHHHTTC-HHHHHHHHHHHH
T ss_pred CC-CHHHhhCCC-HHhHHHHHHHHH
Confidence 65 889999884 444444444443
No 52
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.23 E-value=1.1e-06 Score=71.78 Aligned_cols=44 Identities=27% Similarity=0.602 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCC
Q psy17184 70 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPG 113 (218)
Q Consensus 70 ~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg 113 (218)
..+++++.||+.+++..+|+.++|.+.|+||++||+|+|.+.|+
T Consensus 55 ~~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~ 98 (203)
T 1p5s_A 55 CRVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPD 98 (203)
T ss_dssp HHHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCC
Confidence 35689999999999999997678999999999999999999985
No 53
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=97.82 E-value=5.2e-05 Score=66.52 Aligned_cols=102 Identities=11% Similarity=0.148 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHhhC-CCCCCccchHHhhhchhHHHHHHHhhCCCCccc-cc-CCCCccccchhHHHHHHHHHHhCCCccC
Q psy17184 71 QDKEAQAWIETVTG-QKFPAGVLYEDAIKDGQILCHLINKLKPGSVAK-IN-SSGGQFKFMENINNFQKAIKDYGVADID 147 (218)
Q Consensus 71 ~e~~i~~wie~~l~-~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~k-i~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~ 147 (218)
|+..+.+||...+. .+.+-. ++.+-|+||++||+|++.+.+..+++ ++ .+...++..+|++.-|+++++.|+....
T Consensus 18 Q~ktFt~WiN~~L~~~~~~V~-dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~g~~lv~ 96 (347)
T 4b7l_A 18 QQNTFTRWCNEHLKSVNKRIG-NLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVS 96 (347)
T ss_dssp HHHHHHHHHHHHHGGGTCCCS-CTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHHHhhCcCCCCcC-CHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHhccccCC
Confidence 45678899998764 343333 45666899999999999999888763 33 3556788899999999999999998766
Q ss_pred ccccchhccccChhHHHHHHHHHHhhhh
Q psy17184 148 VFQTVDLYEKKDIAQVTNTIYALGREVF 175 (218)
Q Consensus 148 lF~~~DL~e~kn~~qV~~~l~~L~r~~~ 175 (218)
+ .+.|+.++ |...++--+..|.+.-+
T Consensus 97 i-~~~DIvdG-n~~liLgLiW~li~~~~ 122 (347)
T 4b7l_A 97 I-DSKAIVDG-NLKLILGLVWTLILHYS 122 (347)
T ss_dssp C-CHHHHHTT-CHHHHHHHHHHHHHHHH
T ss_pred C-CcchhhcC-CHhhHHHHHHHHHHHHh
Confidence 5 88999987 56666666667666544
No 54
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=97.66 E-value=6.7e-05 Score=56.38 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhhCC-CCC-CccchH-HhhhchhHHHHHHHhhCCCCccc--ccCCC-CccccchhHHHHHHHHHHhCCCc
Q psy17184 72 DKEAQAWIETVTGQ-KFP-AGVLYE-DAIKDGQILCHLINKLKPGSVAK--INSSG-GQFKFMENINNFQKAIKDYGVAD 145 (218)
Q Consensus 72 e~~i~~wie~~l~~-~l~-~~d~f~-~~l~dG~iLc~L~n~l~pg~i~k--i~~~~-~~f~~~eNI~~Fl~~~~~~Gv~~ 145 (218)
++.+.+|...-+.. +.. .-.+|. ..+.||..+|.|++.+.|+.+.. +..+. ......+|....++.++++|++.
T Consensus 9 d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~~~ 88 (124)
T 1wjo_A 9 DDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARV 88 (124)
T ss_dssp CHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 46789999986542 222 234699 89999999999999999998852 22323 34567899999999999999997
Q ss_pred cCccccchhcccc
Q psy17184 146 IDVFQTVDLYEKK 158 (218)
Q Consensus 146 ~~lF~~~DL~e~k 158 (218)
.-.++|+.+.+
T Consensus 89 --~l~pEDIve~~ 99 (124)
T 1wjo_A 89 --YALPEDLVEVK 99 (124)
T ss_dssp --CCCHHHHHHTC
T ss_pred --ccCHHHHhcCc
Confidence 55899999983
No 55
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.00091 Score=49.71 Aligned_cols=94 Identities=14% Similarity=0.292 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHHhCCCccCcc
Q psy17184 72 DKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKDYGVADIDVF 149 (218)
Q Consensus 72 e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~lF 149 (218)
++.+..|++..+. + +++ -.+|.+.++||..+|.|++.+.|+.+.--.-. +-...+|...-++.++++|+|. +.
T Consensus 11 ~~~LL~W~~~~~~~y~~v~-v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~--~~~~~~n~~~af~~a~~LGi~~--ll 85 (119)
T 2d89_A 11 SQSLLVWCKEVTKNYRGVK-ITNFTTSWRNGLSFCAILHHFRPDLIDYKSLN--PQDIKENNKKAYDGFASIGISR--LL 85 (119)
T ss_dssp HHHHHHHHHHHTTTCSSCC-CCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCC--TTCSHHHHHHHHHHHHHHTCCC--CS
T ss_pred HHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCcCChhhhc--ccCHHHHHHHHHHHHHHhCCCc--cc
Confidence 5678999998774 3 333 33699999999999999999999987421111 1235678888777789999986 77
Q ss_pred ccchhcccc--ChhHHHHHHHHH
Q psy17184 150 QTVDLYEKK--DIAQVTNTIYAL 170 (218)
Q Consensus 150 ~~~DL~e~k--n~~qV~~~l~~L 170 (218)
+++|+.+.. +...|+.-+..+
T Consensus 86 ~peDi~~~~~pD~ksvmtYvs~l 108 (119)
T 2d89_A 86 EPSDMVLLAIPDKLTVMTYLYQI 108 (119)
T ss_dssp CHHHHHHSSSCCHHHHHHHHHHH
T ss_pred CHHHHhccCCCcHHHHHHHHHHH
Confidence 999998642 444444444333
No 56
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=97.41 E-value=0.00084 Score=49.68 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccCc
Q psy17184 72 DKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~l 148 (218)
++.+..|++..+. + +++ -.+|...++||..+|.|++.+.|+.+.--.- ..-...+|...-++.+++ +|+|. +
T Consensus 9 ~~~LL~W~q~~~~~y~~v~-v~nFs~sw~dG~af~aLih~~~P~lid~~~l--~~~~~~~n~~~af~~Ae~~lgi~~--l 83 (116)
T 1wyl_A 9 QEELLRWCQEQTAGYPGVH-VSDLSSSWADGLALCALVYRLQPGLLEPSEL--QGLGALEATAWALKVAENELGITP--V 83 (116)
T ss_dssp HHHHHHHHHHHHHHSTTCC-CSCTTTTTTSSHHHHHHHHHHCTTSCCCSSG--GGCCHHHHHHHHHHHHHHTTCCCC--C
T ss_pred HHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCCCCHHHh--ccCCHHHHHHHHHHHHHHHcCCcc--c
Confidence 4678899998653 4 343 3369999999999999999999998752100 122456888888888876 99986 7
Q ss_pred cccchhccccChhHHHHHHHHH
Q psy17184 149 FQTVDLYEKKDIAQVTNTIYAL 170 (218)
Q Consensus 149 F~~~DL~e~kn~~qV~~~l~~L 170 (218)
.+++|+.+.-+...|+.-+..+
T Consensus 84 L~peD~~~~~d~ksv~tYvs~l 105 (116)
T 1wyl_A 84 VSAQAVVAGSDPLGLIAYLSHF 105 (116)
T ss_dssp SCHHHHHHTSCHHHHHHHHHHH
T ss_pred cCHHHHhcCCchhHHHHHHHHH
Confidence 7999998874554444333333
No 57
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=97.36 E-value=0.0012 Score=49.78 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHHH-hCCCccC
Q psy17184 71 QDKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIKD-YGVADID 147 (218)
Q Consensus 71 ~e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~~-~Gv~~~~ 147 (218)
.++.+..|++..+. + +++ -.+|...++||..+|.|++.+.|+.+.--.- ..-...+|...-++.+++ +|+|.
T Consensus 8 ~k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~af~aLih~~~P~lid~~~l--~~~~~~~n~~~af~~Ae~~lgip~-- 82 (128)
T 2d87_A 8 IKQMLLDWCRAKTRGYEHVD-IQNFSSSWSDGMAFCALVHNFFPEAFDYGQL--SPQNRRQNFEVAFSSAETHADCPQ-- 82 (128)
T ss_dssp HHHHHHHHHHHHSSSCTTCC-CSCTTTTTTSSHHHHHHHHHHCTTTSCSTTS--CSSCHHHHHHHHHHHHHHHHCCCC--
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCcCCHHHc--CccCHHHHHHHHHHHHHHcCCCCc--
Confidence 34678899998775 4 343 3369999999999999999999998742111 123456888888888876 89986
Q ss_pred ccccchhcccc--ChhHHHHHHHHHHhh
Q psy17184 148 VFQTVDLYEKK--DIAQVTNTIYALGRE 173 (218)
Q Consensus 148 lF~~~DL~e~k--n~~qV~~~l~~L~r~ 173 (218)
+.+++|+.+.. +-..|+.-+..+-+.
T Consensus 83 lL~peD~v~~~~pD~ksvmtYvs~l~~~ 110 (128)
T 2d87_A 83 LLDTEDMVRLREPDWKCVYTYIQEFYRC 110 (128)
T ss_dssp CSCHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHhccCCccHHHHHHHHHHHHHH
Confidence 67999997654 344444444444333
No 58
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=97.20 E-value=0.0018 Score=47.31 Aligned_cols=90 Identities=14% Similarity=0.160 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHH-HhCCCccCc
Q psy17184 72 DKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIK-DYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~-~~Gv~~~~l 148 (218)
.+.+..|+...+. + +++ -.+|...++||..+|.|++.+.|+.+.--.-. .-...+|+..-++.++ ++|+|. +
T Consensus 5 k~~LL~W~q~~~~~y~~v~-v~nFs~sw~dG~af~aLih~~~P~lid~~~l~--~~~~~~n~~~af~~Ae~~lgi~~--l 79 (109)
T 1bkr_A 5 KDALLLWCQMKTAGYPNVN-IHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK--KSNAHYNLQNAFNLAEQHLGLTK--L 79 (109)
T ss_dssp HHHHHHHHHHHTTTCTTCC-CSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCC--TTCHHHHHHHHHHHHHHHHCCCC--C
T ss_pred HHHHHHHHHHHHccCCCCC-CCCCcccccccHHHHHHHHHHCcCCCCHHHcC--cCCHHHHHHHHHHHHHHHcCCCc--c
Confidence 4567899998754 4 343 34699999999999999999999987421111 1245688888777775 799986 7
Q ss_pred cccchhccccChhHHHHH
Q psy17184 149 FQTVDLYEKKDIAQVTNT 166 (218)
Q Consensus 149 F~~~DL~e~kn~~qV~~~ 166 (218)
.+++|+..+.--.+.++|
T Consensus 80 l~~eDv~~~~pD~ksi~t 97 (109)
T 1bkr_A 80 LDPEDISVDHPDEKSIIT 97 (109)
T ss_dssp CCHHHHSSSSCCHHHHHH
T ss_pred CCHHHccCCCCcHHHHHH
Confidence 789998654322344444
No 59
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=97.06 E-value=0.0029 Score=47.51 Aligned_cols=91 Identities=13% Similarity=0.185 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhh-CC-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHH-HhCCCccCc
Q psy17184 72 DKEAQAWIETVT-GQ-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIK-DYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l-~~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~-~~Gv~~~~l 148 (218)
.+.+..|+...+ ++ +++ -.+|...++||..+|.|++.+.|+.+.--.- ..-...+|+..-++.++ ++|+|. +
T Consensus 9 k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~Af~aLih~~~P~lid~~~l--~~~~~~~n~~~af~~Ae~~Lgi~~--l 83 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYPNVN-VHNFTTSWRDGLAFNAIVHKHRPDLLDFESL--KKCNAHYNLQNAFNLAEKELGLTK--L 83 (127)
T ss_dssp THHHHHHHHHHHHTSSSCC-CSCSSTTSSSSHHHHHHHHHHCTTTCCTTTS--CSSCCHHHHHHHHHHHHHTTCCCC--C
T ss_pred HHHHHHHHHHHHhcCCCCC-CCCCcccccccHHHHHHHHHHCcCcCCHHHh--CcCCHHHHHHHHHHHHHHHcCCCc--c
Confidence 356889999865 44 343 3469999999999999999999998742111 11245688888788776 799986 6
Q ss_pred cccchhccccChhHHHHHH
Q psy17184 149 FQTVDLYEKKDIAQVTNTI 167 (218)
Q Consensus 149 F~~~DL~e~kn~~qV~~~l 167 (218)
.+++|+..+.--.+.++|-
T Consensus 84 l~~eDv~~~~pDeksimtY 102 (127)
T 1wyq_A 84 LDPEDVNVDQPDEKSIITY 102 (127)
T ss_dssp SCTTTSCSSSCCHHHHHHH
T ss_pred cCHHHhccCCCcHHHHHHH
Confidence 7899986543223444443
No 60
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=97.01 E-value=0.0021 Score=47.65 Aligned_cols=93 Identities=13% Similarity=0.242 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCccc--ccCCCCccccchhHHHHHHHHH-HhCCCc
Q psy17184 71 QDKEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAK--INSSGGQFKFMENINNFQKAIK-DYGVAD 145 (218)
Q Consensus 71 ~e~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~k--i~~~~~~f~~~eNI~~Fl~~~~-~~Gv~~ 145 (218)
-++.+..|+...+. + +++ -.+|...++||..+|.|++.+.|+.+.- +.. -...+|...-++.++ ++|+|.
T Consensus 9 ~~~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~----~~~~~n~~~af~~Ae~~lgi~~ 83 (118)
T 1bhd_A 9 SEKILLSWVRQTTRPYSQVN-VLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVK----MSPIERLEHAFSKAQTYLGIEK 83 (118)
T ss_dssp HHHHHHHHHHHHHTTSTTCC-CCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHH----SCHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCCcccccCcHHHHHHHHHHCcCcCCHHHhCc----CCHHHHHHHHHHHHHHHcCCCc
Confidence 35678899998764 4 243 3369999999999999999999998751 111 134578887777775 899986
Q ss_pred cCccccchhcccc-ChhHHHHHHHHH
Q psy17184 146 IDVFQTVDLYEKK-DIAQVTNTIYAL 170 (218)
Q Consensus 146 ~~lF~~~DL~e~k-n~~qV~~~l~~L 170 (218)
+.+++|+..++ +-..|+.-+..+
T Consensus 84 --ll~~eDv~~~~pD~ksvmtYvs~l 107 (118)
T 1bhd_A 84 --LLDPEDVAVRLPDKKSIIMYLTSL 107 (118)
T ss_dssp --CSCHHHHHTSCCCHHHHHHHHHHH
T ss_pred --ccCHHHhhcCCCcHHHHHHHHHHH
Confidence 67899986543 333443333333
No 61
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=96.96 E-value=0.0034 Score=46.69 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhC-C-CCCCccchHHhhhchhHHHHHHHhhCCCCcccccCCCCccccchhHHHHHHHHH-HhCCCccCcc
Q psy17184 73 KEAQAWIETVTG-Q-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINNFQKAIK-DYGVADIDVF 149 (218)
Q Consensus 73 ~~i~~wie~~l~-~-~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~~~~~~f~~~eNI~~Fl~~~~-~~Gv~~~~lF 149 (218)
+.+..|++..+. + +++ -.+|...++||..+|.|++.+.|+.+.--.- ..-...+|...-++.++ .+|+|. +.
T Consensus 12 ~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid~~~l--~~~~~~~n~~~af~~Ae~~lgi~~--lL 86 (121)
T 2d88_A 12 SKLLGWCQRQTDGYAGVN-VTDLTMSWKSGLALCAIIHRYRPDLIDFDSL--DEQNVEKNNQLAFDIAEKELGISP--IM 86 (121)
T ss_dssp CHHHHHHHHHSTTSSSCC-CCCSSHHHHTSHHHHHHHHHHCTTTSCTTTS--CTTCHHHHHHHHHHHHHHHTCCCC--SS
T ss_pred HHHHHHHHHHhccCCCCC-CCCchhhccccHHHHHHHHHhCcCcCCHHHc--CccCHHHHHHHHHHHHHHHcCCCC--cC
Confidence 457899998774 3 343 3369999999999999999999998742111 11245688888888886 599986 77
Q ss_pred ccchhccc--cChhHHHHHHHHH
Q psy17184 150 QTVDLYEK--KDIAQVTNTIYAL 170 (218)
Q Consensus 150 ~~~DL~e~--kn~~qV~~~l~~L 170 (218)
+++|+.+. -+-..|+.-+..+
T Consensus 87 ~peD~~~~~~pD~ksimtYvs~l 109 (121)
T 2d88_A 87 TGKEMASVGEPDKLSMVMYLTQF 109 (121)
T ss_dssp CHHHHHHSSCCCHHHHHHHHHHH
T ss_pred CHHHHhccCCCcHHHHHHHHHHH
Confidence 99999853 3444444444333
No 62
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=96.54 E-value=0.006 Score=45.98 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhCC-CCCCchhHHHHhhhhhHHHhhhhhccCCCcc--CCC-Ch----hhHHHHHHHHHHhhCCCCCCcc
Q psy17184 20 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLINKLKPGSIA--AKR-NP----EQDKEAQAWIETVTGQKFPAGV 91 (218)
Q Consensus 20 ~~e~~~Wie~~~g~-~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~--kk~-~~----~~e~~i~~wie~~l~~~l~~~d 91 (218)
+.-...||...+.+ .++ -.++..-|+||++||+|++.+.|..++ +++ .| ...+|+..-++.....++.-..
T Consensus 24 ~ktft~WiN~~L~~~~~~-v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~~gi~l~~ 102 (131)
T 2vzc_A 24 KKTLITFVNKHLNKLNLE-VTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPK 102 (131)
T ss_dssp HHHHHHHHHHHHGGGTCC-CCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHcCCc-ccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 34578899998753 232 246889999999999999999998775 222 12 4455665444444333332211
Q ss_pred chHHhhhchh
Q psy17184 92 LYEDAIKDGQ 101 (218)
Q Consensus 92 ~f~~~l~dG~ 101 (218)
.=.+-+-||+
T Consensus 103 I~~~DIvdGn 112 (131)
T 2vzc_A 103 PRPEDIVNCD 112 (131)
T ss_dssp SCHHHHHTTC
T ss_pred CCHHHhhCCC
Confidence 1223445555
No 63
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=96.41 E-value=0.011 Score=49.77 Aligned_cols=81 Identities=22% Similarity=0.448 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--ccc-CCCCccccchhHHHHHHHHHHhCCCccCc
Q psy17184 72 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINNFQKAIKDYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~l 148 (218)
..++..||...++..+..- +-+.+|.++|+++..+.||.|+ +++ .+...+....|..-+.++-.++|++. .
T Consensus 17 R~elL~WiN~~L~~~~~ki----Eel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~~F~k~~I~k--~ 90 (268)
T 2r8u_A 17 RHDMLAWINESLQLNLTKI----EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDK--I 90 (268)
T ss_dssp HHHHHHHHHHHHTCCCCCG----GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHTTCCC--C
T ss_pred HHHHHHHHHHHhcCCcchH----HHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHHHHHHcCCCC--c
Confidence 4689999999999887664 4578999999999999999987 443 23344545455555555557888865 4
Q ss_pred cccchhcccc
Q psy17184 149 FQTVDLYEKK 158 (218)
Q Consensus 149 F~~~DL~e~k 158 (218)
+..+.|.-++
T Consensus 91 ipV~kLvkgk 100 (268)
T 2r8u_A 91 IPVDKLVKGK 100 (268)
T ss_dssp CCHHHHTTTC
T ss_pred cCHHHHhccC
Confidence 5666666665
No 64
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=95.82 E-value=0.029 Score=42.85 Aligned_cols=80 Identities=19% Similarity=0.371 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--ccc-CCCCccccchhHHHHHHHHHHhCCCccCc
Q psy17184 72 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINNFQKAIKDYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~l 148 (218)
..++..||...+...+..- +.+.+|.++|+++..+. |.|+ +++ .+...+....|..-..++-.++|++. .
T Consensus 8 R~eLL~WiN~~L~~n~tkI----E~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k~~I~k--~ 80 (145)
T 4abo_I 8 RQELLAWINQVTSLGLTRI----EDCGKGYAMIQIFDSIY-QDIPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDK--V 80 (145)
T ss_dssp HHHHHHHHHHHHTCCCCSG----GGGGGSHHHHHHHHHHH-CCSCTTTSCSSCCSHHHHHHHHHHHHHHHHHHTCCC--C
T ss_pred HHHHHHHHHHHcCCCcchH----HHccccHHHHHHHHHHh-cCcchhhcccCCCCHHHHHHHHHHHHHHHHHcCCCC--c
Confidence 4589999999999888664 45789999999999999 6665 444 34556667778777778888999976 3
Q ss_pred cccchhcccc
Q psy17184 149 FQTVDLYEKK 158 (218)
Q Consensus 149 F~~~DL~e~k 158 (218)
+..+.|.-++
T Consensus 81 ipV~kLvKgk 90 (145)
T 4abo_I 81 VDPERLSRCK 90 (145)
T ss_dssp CCHHHHTTTC
T ss_pred cCHHHHhccc
Confidence 5666666665
No 65
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=95.63 E-value=0.0086 Score=44.79 Aligned_cols=69 Identities=14% Similarity=0.293 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHh---CCCCCCchhHH-HHhhhhhHHHhhhhhccCCCccCC--C-----ChhhHHHHHHHHHHhhCCCCC
Q psy17184 20 DKEAQAWIETVT---GQKFPAGVLYE-DAIKDGQILCHLINKLKPGSIAAK--R-----NPEQDKEAQAWIETVTGQKFP 88 (218)
Q Consensus 20 ~~e~~~Wie~~~---g~~i~~~~~~~-~~LkdGvvLC~L~n~l~P~~i~kk--~-----~~~~e~~i~~wie~~l~~~l~ 88 (218)
++++..|....+ |.+.. -.+|. ..++||+.+|.|++.+.|+.+..- . +.+..+|+..-|+..-..+++
T Consensus 9 d~~ll~W~N~kl~~~g~~~~-I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~~ 87 (124)
T 1wjo_A 9 DDIIVNWVNRTLSEAGKSTS-IQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGAR 87 (124)
T ss_dssp CHHHHHHHHHHHHHHTCSCC-CSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHhcCCCcc-cCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 568999998765 33221 13588 899999999999999999988532 1 124456777777766556654
Q ss_pred C
Q psy17184 89 A 89 (218)
Q Consensus 89 ~ 89 (218)
.
T Consensus 88 ~ 88 (124)
T 1wjo_A 88 V 88 (124)
T ss_dssp C
T ss_pred c
Confidence 3
No 66
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.32 E-value=0.027 Score=41.57 Aligned_cols=44 Identities=16% Similarity=0.430 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 20 DKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 20 ~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
++.++.|....+.. .+. -.+|-...+||.++|-|++.+.|+.+.
T Consensus 11 ~~~LL~W~~~~~~~y~~v~-v~nFs~sw~dG~af~aLi~~~~P~lid 56 (119)
T 2d89_A 11 SQSLLVWCKEVTKNYRGVK-ITNFTTSWRNGLSFCAILHHFRPDLID 56 (119)
T ss_dssp HHHHHHHHHHHTTTCSSCC-CCCSSHHHHTTHHHHHHHHHHCTTTSC
T ss_pred HHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCcCC
Confidence 67899999998852 121 146888999999999999999998774
No 67
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=94.98 E-value=0.081 Score=39.57 Aligned_cols=80 Identities=13% Similarity=0.347 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCcc--ccc-CCCCccccchhHHHHHHHHHHhCCCccCc
Q psy17184 72 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINNFQKAIKDYGVADIDV 148 (218)
Q Consensus 72 e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~--ki~-~~~~~f~~~eNI~~Fl~~~~~~Gv~~~~l 148 (218)
..++..||...+...+..- +.+.+|.++|+++..+.| .++ +++ .+...+....|.....++-.+.|++. .
T Consensus 12 R~elL~WiN~~L~~n~~ki----Eel~tGaayCQl~d~l~g-~v~l~kVkf~a~~e~e~~~N~k~LQ~~f~k~~I~k--~ 84 (127)
T 2qjx_A 12 RTELLTWLNGLLNLNYKKI----EECGTGAAYCQIMDSIYG-DLPMNRVKFNATAEYEFQTNYKILQSCFSRHGIEK--T 84 (127)
T ss_dssp HHHHHHHHHHHHTCCCCSG----GGGGGSHHHHHHHHHHHC-CSCGGGSCTTCCSHHHHHHHHHHHHHHHHHTTCCC--C
T ss_pred HHHHHHHHHHHHcCCccHH----HHccchHHHHHHHhhhcc-ccCccccCCCCCCHHHHHHHHHHHHHHHHHcCCCC--c
Confidence 4689999999999888763 345899999999999994 454 333 34455666678887788888899874 3
Q ss_pred cccchhcccc
Q psy17184 149 FQTVDLYEKK 158 (218)
Q Consensus 149 F~~~DL~e~k 158 (218)
+..+.|.-++
T Consensus 85 ipV~kLvKgr 94 (127)
T 2qjx_A 85 VYVDKLIRCK 94 (127)
T ss_dssp CCHHHHTTTC
T ss_pred cCHHHHhccC
Confidence 4555666554
No 68
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=94.35 E-value=0.12 Score=43.41 Aligned_cols=41 Identities=27% Similarity=0.532 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 20 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 20 ~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
-.|++.||...+..++..- +-|.+|.+.|.+++.|.|++|+
T Consensus 17 R~elL~WiN~~L~~~~~ki----Eel~tGaayCQlmd~l~P~~i~ 57 (268)
T 2r8u_A 17 RHDMLAWINESLQLNLTKI----EQLCSGAAYCQFMDMLFPGSIA 57 (268)
T ss_dssp HHHHHHHHHHHHTCCCCCG----GGGGGSHHHHHHHHHHSTTSSC
T ss_pred HHHHHHHHHHHhcCCcchH----HHcccchHHHHHHHHHccCCCc
Confidence 3689999999999888652 5689999999999999999985
No 69
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=94.34 E-value=0.07 Score=39.13 Aligned_cols=69 Identities=16% Similarity=0.269 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHhC----CCCCCchhHHHHhhhhhHHHhhhhhccCCCccCCC--ChhhHHHHHHHHHHhhC-CCCCC
Q psy17184 18 EQDKEAQAWIETVTG----QKFPAGVLYEDAIKDGQILCHLINKLKPGSIAAKR--NPEQDKEAQAWIETVTG-QKFPA 89 (218)
Q Consensus 18 ~~~~e~~~Wie~~~g----~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~kk~--~~~~e~~i~~wie~~l~-~~l~~ 89 (218)
..++.+..|....+. .+| .+|-...+||.++|-|++.+.|+.+.--. .....+++..-++.... .++|.
T Consensus 7 ~~~~~LL~W~q~~~~~y~~v~v---~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ 82 (116)
T 1wyl_A 7 GTQEELLRWCQEQTAGYPGVHV---SDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITP 82 (116)
T ss_dssp SSHHHHHHHHHHHHHHSTTCCC---SCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHhccCCCCCC---CCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCcc
Confidence 346789999998873 333 45888999999999999999999874211 11233444444444332 55554
No 70
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=94.32 E-value=0.059 Score=39.88 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCccC--CCChhhHHHHHHHHHHhh-CCCCCC
Q psy17184 20 DKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIAA--KRNPEQDKEAQAWIETVT-GQKFPA 89 (218)
Q Consensus 20 ~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~k--k~~~~~e~~i~~wie~~l-~~~l~~ 89 (218)
++.++.|....+.. .+. -.+|-...+||.++|-|++.+.|+.+.- .......+++..-++... ..++|.
T Consensus 11 ~~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ 84 (121)
T 2d88_A 11 SSKLLGWCQRQTDGYAGVN-VTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISP 84 (121)
T ss_dssp SCHHHHHHHHHSTTSSSCC-CCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhccCCCCC-CCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCCC
Confidence 45689999998842 222 1458889999999999999999988742 112233445544444433 245554
No 71
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=94.24 E-value=0.075 Score=39.73 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 19 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 19 ~~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
.++.++.|....+.. .++ -.+|-...+||.++|-|++.+.|+.+.
T Consensus 8 ~k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~af~aLih~~~P~lid 54 (128)
T 2d87_A 8 IKQMLLDWCRAKTRGYEHVD-IQNFSSSWSDGMAFCALVHNFFPEAFD 54 (128)
T ss_dssp HHHHHHHHHHHHSSSCTTCC-CSCTTTTTTSSHHHHHHHHHHCTTTSC
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCcCC
Confidence 367899999998853 222 146888999999999999999998874
No 72
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=92.89 E-value=0.17 Score=36.57 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 19 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 19 ~~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
.++.+..|....+.. .++ -.+|-...+||.++|-|++.+.|+.+.
T Consensus 4 ~k~~LL~W~q~~~~~y~~v~-v~nFs~sw~dG~af~aLih~~~P~lid 50 (109)
T 1bkr_A 4 AKDALLLWCQMKTAGYPNVN-IHNFTTSWRDGMAFNALIHKHRPDLID 50 (109)
T ss_dssp HHHHHHHHHHHHTTTCTTCC-CSSSSGGGTTSHHHHHHHHHHCGGGCC
T ss_pred HHHHHHHHHHHHHccCCCCC-CCCCcccccccHHHHHHHHHHCcCCCC
Confidence 356789999988752 121 246889999999999999999998774
No 73
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=92.66 E-value=0.19 Score=37.39 Aligned_cols=44 Identities=14% Similarity=0.287 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 20 DKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 20 ~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
++.++.|....+.. .++ -.+|-...+||.++|-|++.+.|+.+.
T Consensus 9 k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~Af~aLih~~~P~lid 54 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYPNVN-VHNFTTSWRDGLAFNAIVHKHRPDLLD 54 (127)
T ss_dssp THHHHHHHHHHHHTSSSCC-CSCSSTTSSSSHHHHHHHHHHCTTTCC
T ss_pred HHHHHHHHHHHHhcCCCCC-CCCCcccccccHHHHHHHHHHCcCcCC
Confidence 56789999988631 121 145888899999999999999998874
No 74
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=92.63 E-value=0.087 Score=38.76 Aligned_cols=45 Identities=16% Similarity=0.350 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCC--CCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 19 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 19 ~~~e~~~Wie~~~g~--~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
.++.+..|....+.. .++ -.+|-...+||.++|-|++.+.|+.+.
T Consensus 9 ~~~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid 55 (118)
T 1bhd_A 9 SEKILLSWVRQTTRPYSQVN-VLNFTTSWTDGLAFNAVLHRHKPDLFS 55 (118)
T ss_dssp HHHHHHHHHHHHHTTSTTCC-CCSSSGGGTTSHHHHHHHHHHCGGGSC
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCCcccccCcHHHHHHHHHHCcCcCC
Confidence 366789999988842 121 145888999999999999999998774
No 75
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=91.36 E-value=0.62 Score=35.46 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 20 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 20 ~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
-.|++.||...+..++..- +-|.+|.+.|.+++.|. ++|+
T Consensus 8 R~eLL~WiN~~L~~n~tkI----E~l~sGAaYCQlmD~lf-g~i~ 47 (145)
T 4abo_I 8 RQELLAWINQVTSLGLTRI----EDCGKGYAMIQIFDSIY-QDIP 47 (145)
T ss_dssp HHHHHHHHHHHHTCCCCSG----GGGGGSHHHHHHHHHHH-CCSC
T ss_pred HHHHHHHHHHHcCCCcchH----HHccccHHHHHHHHHHh-cCcc
Confidence 3589999999999888642 56899999999999999 5663
No 76
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=91.27 E-value=0.76 Score=34.24 Aligned_cols=38 Identities=11% Similarity=0.397 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCC
Q psy17184 20 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPG 61 (218)
Q Consensus 20 ~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~ 61 (218)
-.|++.||.+.+..++.. -+.|.+|.+.|.+++.+.|.
T Consensus 12 R~elL~WiN~~L~~n~~k----iEel~tGaayCQl~d~l~g~ 49 (127)
T 2qjx_A 12 RTELLTWLNGLLNLNYKK----IEECGTGAAYCQIMDSIYGD 49 (127)
T ss_dssp HHHHHHHHHHHHTCCCCS----GGGGGGSHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCccH----HHHccchHHHHHHHhhhccc
Confidence 358999999999988865 35568999999999999853
No 77
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.56 E-value=4.1 Score=30.16 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=52.0
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCccc--ccCCCCccccchhHHHHH-HHHHHhCCC
Q psy17184 68 NPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAK--INSSGGQFKFMENINNFQ-KAIKDYGVA 144 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~k--i~~~~~~f~~~eNI~~Fl-~~~~~~Gv~ 144 (218)
+.+...++.+||.. +....+.. .+..-+.||.+++.++..+.|..+.- .......-....|=..|- +..+++|++
T Consensus 13 ~~ee~~el~~WL~~-l~Ls~~~r-n~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~S~~~K~~NW~~ln~kvl~kl~~~ 90 (127)
T 2ee7_A 13 DEEALHQLYLWVDN-IPLSRPKR-NLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKRLNFS 90 (127)
T ss_dssp CHHHHHHHHHHHHH-SCCSCCSS-CHHHHHTTSHHHHHHHHHHCTTTCCCSSCCCCSSHHHHHHHHHHHHHHTTGGGTCC
T ss_pred CHHHHHHHHHHHHc-CCCCCCCC-chhhhccchhHHHHHHHHHCcCcccccccCCCCcHHHHHHhHHHHHHHHHHHcCCC
Confidence 45667789999993 33333322 47778999999999999999987653 222223335567777774 667788886
Q ss_pred c
Q psy17184 145 D 145 (218)
Q Consensus 145 ~ 145 (218)
-
T Consensus 91 l 91 (127)
T 2ee7_A 91 V 91 (127)
T ss_dssp C
T ss_pred C
Confidence 3
No 78
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.60 E-value=4.7 Score=29.83 Aligned_cols=49 Identities=14% Similarity=0.256 Sum_probs=36.3
Q ss_pred cCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCcc
Q psy17184 14 KRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSIA 64 (218)
Q Consensus 14 ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i~ 64 (218)
..+.+...|+..||.. +..+.+. .++..-+.||+.+.++++...|..|.
T Consensus 11 ~l~~ee~~el~~WL~~-l~Ls~~~-rn~rRDFSdG~lvAEIl~~y~Pk~Vd 59 (127)
T 2ee7_A 11 SVDEEALHQLYLWVDN-IPLSRPK-RNLSRDFSDGVLVAEVIKFYFPKMVE 59 (127)
T ss_dssp SCCHHHHHHHHHHHHH-SCCSCCS-SCHHHHHTTSHHHHHHHHHHCTTTCC
T ss_pred CCCHHHHHHHHHHHHc-CCCCCCC-CchhhhccchhHHHHHHHHHCcCccc
Confidence 3456677799999983 3333222 35778899999999999999997663
No 79
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=69.28 E-value=1 Score=28.29 Aligned_cols=31 Identities=10% Similarity=0.212 Sum_probs=18.5
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHh
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVT 31 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~ 31 (218)
||+++|...+-.++=...--+.+.+||+++-
T Consensus 19 MGFd~erae~Alk~Tg~~Gle~AmewL~k~~ 49 (54)
T 2cos_A 19 AGCDQEMAGRALKQTGSRSIEAALEYISKMS 49 (54)
T ss_dssp HHCCHHHHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHhCcccHHHHHHHHHHhc
Confidence 5666665555554444333567788888874
No 80
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=48.96 E-value=14 Score=28.40 Aligned_cols=45 Identities=9% Similarity=0.247 Sum_probs=32.7
Q ss_pred ChhHHHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhccCCCc
Q psy17184 16 NPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSI 63 (218)
Q Consensus 16 ~~~~~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l~P~~i 63 (218)
..+...-+..|+...-... +. . -.+-|.||++|.++.+.+.|...
T Consensus 7 ~~~~~~aLl~W~~tf~~~~-~~-~-~~~dL~DG~~L~~iL~~IDp~~F 51 (164)
T 1wix_A 7 GLPLCDSLIIWLQTFKTAS-PC-Q-DVKQLTNGVTMAQVLHQIDVAWF 51 (164)
T ss_dssp SCHHHHHHHHHHTTCCCSS-CC-C-SHHHHTTSHHHHHHHHHHCTTTS
T ss_pred hhHHHHHHHHHHHHcCCCC-Cc-C-cHHHhccHHHHHHHHHHhCcccc
Confidence 4567788999997643211 21 2 35778999999999999999764
No 81
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=48.44 E-value=3.5 Score=26.64 Aligned_cols=31 Identities=10% Similarity=0.208 Sum_probs=22.3
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...|-..+=+-.. +++.+||-.-.+
T Consensus 29 MGFs~~qA~kALKat~~Nv-ErAaDWLFSH~D 59 (63)
T 1wgn_A 29 MGYSYECVLRAMKKKGENI-EQILDYLFAHSG 59 (63)
T ss_dssp HHCCHHHHHHHHHHHCSCH-HHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHHcCCCH-HHHHHHHHhCCC
Confidence 7888888777776655544 589999976543
No 82
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=41.49 E-value=13 Score=25.44 Aligned_cols=36 Identities=14% Similarity=0.261 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHhh-CCCCCCccchHHhhhchhHHHHHH
Q psy17184 71 QDKEAQAWIETVT-GQKFPAGVLYEDAIKDGQILCHLI 107 (218)
Q Consensus 71 ~e~~i~~wie~~l-~~~l~~~d~f~~~l~dG~iLc~L~ 107 (218)
..+.|..||.-+. .+++++. ++...-.||.-||.+.
T Consensus 14 s~~~V~~WL~W~~~ef~L~~i-~~~~F~m~G~~LC~ls 50 (85)
T 1sv0_A 14 SREDVLVFLRFCVREFDLPKL-DFDLFQMNGKRLCLLT 50 (85)
T ss_dssp CHHHHHHHHHHHHHHTTCCCC-CGGGGCSCHHHHTTCC
T ss_pred CHHHHHHHHHHHHHccCCCCC-ChhhCCCCHHHHHcCC
Confidence 4778999999755 4777654 3555568999999864
No 83
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=40.61 E-value=11 Score=24.33 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=21.8
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...|-...-.-.-.+.+..||..-..
T Consensus 19 MGF~~~~a~~AL~~t~n~~~e~A~~wL~~h~~ 50 (64)
T 2crn_A 19 MGFPVHTALKALAATGRKTAEEALAWLHDHCN 50 (64)
T ss_dssp TSCCHHHHHHHHHHHTSCCHHHHHHHHHHHSS
T ss_pred cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 89999877766654321235678999987654
No 84
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=37.70 E-value=13 Score=21.62 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=16.4
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIE 28 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie 28 (218)
||++++...+-..+.+- ..+.+..||-
T Consensus 14 MGF~~~~a~~AL~~~~~-n~e~A~~~L~ 40 (43)
T 2g3q_A 14 MGFTEEEAHNALEKCNW-DLEAATNFLL 40 (43)
T ss_dssp TTSCHHHHHHHHHHHTS-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCc-CHHHHHHHHH
Confidence 78887776665554433 2345677874
No 85
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=37.61 E-value=20 Score=21.58 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=19.3
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIET 29 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~ 29 (218)
||++++...+-..+.+-.. +.+.+||..
T Consensus 18 MGF~~~~a~~AL~~~~~n~-e~A~e~L~~ 45 (49)
T 1ify_A 18 MGYERERVVAALRASYNNP-HRAVEYLLT 45 (49)
T ss_dssp TTCCHHHHHHHHHTTTSCS-HHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCH-HHHHHHHHh
Confidence 8888888777766664422 467888864
No 86
>1rfz_A Hypothetical protein APC35681; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.80A {Geobacillus stearothermophilus} SCOP: a.195.1.1
Probab=36.69 E-value=51 Score=25.46 Aligned_cols=97 Identities=22% Similarity=0.226 Sum_probs=63.4
Q ss_pred HHHHHHHHccCChhH-HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhhc-cCCCccCC--CChh---hHHHHHH
Q psy17184 5 RQVAAKIAAKRNPEQ-DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKL-KPGSIAAK--RNPE---QDKEAQA 77 (218)
Q Consensus 5 ~e~~~k~~~ky~~~~-~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~l-~P~~i~kk--~~~~---~e~~i~~ 77 (218)
+|+...+..+|.+.. .+++.+=++.++.+. +.+..+--|+.||+++..- -|...... .++. -.+-+-.
T Consensus 31 a~~~~~Lq~~y~p~l~~e~~~e~v~~vL~Kr-----eV~~~il~GI~Ld~~ae~~~l~~pl~~~~~~D~~~iviDEv~G~ 105 (168)
T 1rfz_A 31 AELVYYLQSKYHPDLTMEECIENVNRVISKR-----EVQNAILTGIQLDKLAEDGRLDEPLQSIIRRDEGLYGVDEILAL 105 (168)
T ss_dssp HHHHHHHHTTTCSSCCHHHHHHHHHHHHTCH-----HHHHHHHHHHHHHHHTTTTCSCTTHHHHHHHTCTTCCHHHHHHH
T ss_pred HHHHHHhcCccCCCcCHHHHHHHHHHHHCCH-----HHHHHHHHHHHHHHHHhccccCchhHHHhccCCCceeeehHHHH
Confidence 355566788999874 778888899999763 4778888899999999653 23221111 1221 1334556
Q ss_pred HHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCccccc
Q psy17184 78 WIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN 119 (218)
Q Consensus 78 wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~ 119 (218)
||-.+.+ --|.++-++....+|+.+....
T Consensus 106 ~Ia~~~g-------------~~gf~~Fr~fDi~KPgpI~~ld 134 (168)
T 1rfz_A 106 SIVNVYG-------------SIGFTNYGYIDKQKPGILQYLN 134 (168)
T ss_dssp HHHHTTC-------------TTHHHHHHHHHHHCCTHHHHHH
T ss_pred HHHHHHH-------------HHHHHHHHHHHhccchhHHHhh
Confidence 7766321 1355778888888898876554
No 87
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=34.77 E-value=23 Score=19.83 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=14.3
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWI 27 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wi 27 (218)
||++++...+-....+-+ .+.+..|+
T Consensus 14 mGf~~~~a~~AL~~~~~n-~e~A~~~L 39 (40)
T 1z96_A 14 MGFDPLEAAQALDAANGD-LDVAASFL 39 (40)
T ss_dssp TTCCHHHHHHHHHHTTTC-HHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCC-HHHHHHHH
Confidence 677777665555444332 23456665
No 88
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=33.98 E-value=24 Score=22.51 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=20.6
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHh
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVT 31 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~ 31 (218)
||++++...+-..+.+-+ .+.+..||..-.
T Consensus 19 MGF~~~~a~~AL~~~~~n-ve~A~e~L~~~~ 48 (63)
T 1wji_A 19 MGFSKEASRQALMDNGNN-LEAALNVLLTSN 48 (63)
T ss_dssp TTCCHHHHHHHHHHTTSC-HHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHhCCC-HHHHHHHHHHCC
Confidence 888888776666655543 356888987543
No 89
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=33.90 E-value=67 Score=24.39 Aligned_cols=93 Identities=10% Similarity=0.140 Sum_probs=53.3
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCc-----ccccCCC-Ccc-ccchhHHHHHHHHHH
Q psy17184 68 NPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-----AKINSSG-GQF-KFMENINNFQKAIKD 140 (218)
Q Consensus 68 ~~~~e~~i~~wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i-----~ki~~~~-~~f-~~~eNI~~Fl~~~~~ 140 (218)
+.+....+..|++.+... ++...| +-|.||++|..+++.|.|..- ++++... ... ....|+...++....
T Consensus 7 ~~~~~~aLl~W~~tf~~~--~~~~~~-~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 83 (164)
T 1wix_A 7 GLPLCDSLIIWLQTFKTA--SPCQDV-KQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITS 83 (164)
T ss_dssp SCHHHHHHHHHHTTCCCS--SCCCSH-HHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCC--CCcCcH-HHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHHHHHHHH
Confidence 346677889999765322 122233 567899999999999999753 3444321 122 244566666666543
Q ss_pred -----hCCCc--cCccccchhccccChhHH
Q psy17184 141 -----YGVAD--IDVFQTVDLYEKKDIAQV 163 (218)
Q Consensus 141 -----~Gv~~--~~lF~~~DL~e~kn~~qV 163 (218)
+|.+. ..+.+..-+.+..+....
T Consensus 84 Yy~e~L~~~i~~~~~pd~~~Ia~~~d~~el 113 (164)
T 1wix_A 84 YYHEFLGQQISEELIPDLNQITECADPVEL 113 (164)
T ss_dssp HHHTTTCCCCCTTTCCCHHHHHTTCCHHHH
T ss_pred HHHHHhcCcccccCCCCHHHHHhCCCHHHH
Confidence 34332 123444445555554433
No 90
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=32.73 E-value=17 Score=24.64 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=22.4
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...|-..+..-.-.+.+..||..-.+
T Consensus 39 MGF~~~~a~~AL~~t~n~n~e~A~ewL~~h~~ 70 (84)
T 1vek_A 39 MGFSQLHCQKAAINTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp HTCCHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 89999888777565532234578999987654
No 91
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=30.92 E-value=80 Score=24.55 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=64.0
Q ss_pred HHHHHHHHccCChhH-HHHHHHHHHHHhCCCCCCchhHHHHhhhhhHHHhhhhh-ccCCCccCC--CChh---hHHHHHH
Q psy17184 5 RQVAAKIAAKRNPEQ-DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINK-LKPGSIAAK--RNPE---QDKEAQA 77 (218)
Q Consensus 5 ~e~~~k~~~ky~~~~-~~e~~~Wie~~~g~~i~~~~~~~~~LkdGvvLC~L~n~-l~P~~i~kk--~~~~---~e~~i~~ 77 (218)
+|+..-+..+|.+.. .+++.+=+++++.+. +.+..+--|+.||.++.. .-|...... .++. -.+-+-.
T Consensus 29 ae~v~~Lq~~y~p~l~~e~~~e~v~~vL~Kr-----eV~~~il~GI~Ld~~ae~~~l~epl~~~i~~D~~~iviDEi~G~ 103 (178)
T 1y9i_A 29 AELVLFLQQKYHPGLELDICRQNVEHVLRKR-----EVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILAL 103 (178)
T ss_dssp HHHHHHHHTTTSTTCCHHHHHHHHHHHHTCH-----HHHHHHHHHHHHHHHHHTTCSCTTHHHHHHTTCTTCCHHHHHHH
T ss_pred HHHHHHhcCccCCCcCHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHhccCCchhHHHhccCCCceeeehHHHH
Confidence 345567788898864 778999999999763 477788889999999966 223211111 2321 1334456
Q ss_pred HHHHhhCCCCCCccchHHhhhchhHHHHHHHhhCCCCccccc
Q psy17184 78 WIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN 119 (218)
Q Consensus 78 wie~~l~~~l~~~d~f~~~l~dG~iLc~L~n~l~pg~i~ki~ 119 (218)
||-...+ --|.++-++....+|+.|....
T Consensus 104 ~Ia~~~g-------------~~gf~~Fr~fDi~KPgpI~~ld 132 (178)
T 1y9i_A 104 SIVNVYG-------------SIGFTNYGYIDKVKPGILAKLN 132 (178)
T ss_dssp HHHGGGC-------------GGGHHHHHHHHHHCCTHHHHTT
T ss_pred HHHHHHH-------------HHHHHHHHHHHhccchhHHhhh
Confidence 7765421 1466788888899999887554
No 92
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.61 E-value=15 Score=21.75 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=16.5
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIE 28 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie 28 (218)
||++++...+-..... ..+.+..||.
T Consensus 19 MGF~~~~a~~AL~~~~--n~e~A~~~L~ 44 (47)
T 2ekk_A 19 MGFTREHAMEALLNTS--TMEQATEYLL 44 (47)
T ss_dssp HHCCHHHHHHHHHHSC--SHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcC--CHHHHHHHHH
Confidence 6777776666555543 3457788874
No 93
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=29.60 E-value=35 Score=23.50 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhh-CCCCCCccchHHhhhchhHHHHHH
Q psy17184 71 QDKEAQAWIETVT-GQKFPAGVLYEDAIKDGQILCHLI 107 (218)
Q Consensus 71 ~e~~i~~wie~~l-~~~l~~~d~f~~~l~dG~iLc~L~ 107 (218)
..+.|..||.-+. .+++++. ++...-.||.-||.+-
T Consensus 27 s~~~V~~WL~W~~~ef~L~~v-~~~~f~m~G~~LC~ls 63 (91)
T 1sxd_A 27 STDQVLHWVVWVMKEFSMTDI-DLTTLNISGRELCSLN 63 (91)
T ss_dssp CHHHHHHHHHHHHHHTTCCCS-CSGGGCSCHHHHHHSC
T ss_pred CHHHHHHHHHHHHHccCCCCC-ChhhCCCCHHHHHcCC
Confidence 3678999999754 4677654 3555578999999865
No 94
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.14 E-value=15 Score=24.29 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=22.0
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...+-.....-.-.+.+..||..-.+
T Consensus 19 MGF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~ 50 (74)
T 2dag_A 19 MGFPMDACRKAVYYTGNSGAEAAMNWVMSHMD 50 (74)
T ss_dssp HSCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 78888877776665442224578999987654
No 95
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=28.54 E-value=20 Score=22.93 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=19.6
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIET 29 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~ 29 (218)
||++++...+-...-+-.-.+.+..||..
T Consensus 29 MGF~~~~a~~AL~~t~~~nve~A~ewL~~ 57 (64)
T 2cpw_A 29 MGFPRARAQKALASTGGRSVQTACDWLFS 57 (64)
T ss_dssp HTCCHHHHHHHHHHTTTSCHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 78888877776665542234578899864
No 96
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=28.13 E-value=22 Score=22.68 Aligned_cols=31 Identities=26% Similarity=0.280 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHccC-ChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKR-NPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky-~~~~~~e~~~Wie~~~g 32 (218)
||++++...+-.... +. -.+.+..||..-.+
T Consensus 19 MGF~~~~a~~AL~~t~~~-nve~A~ewLl~~~~ 50 (64)
T 1whc_A 19 MGFPRGRAEKALALTGNQ-GIEAAMDWLMEHED 50 (64)
T ss_dssp TTCCHHHHHHHHHHHTSC-CHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHhcCC-CHHHHHHHHHhCCC
Confidence 888888777665544 22 24578999987654
No 97
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=27.21 E-value=32 Score=23.37 Aligned_cols=31 Identities=16% Similarity=0.043 Sum_probs=25.4
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...+...+.+-+ .+.+..||..-.|
T Consensus 39 MGF~~~~A~~AL~~t~gd-ve~A~e~L~sh~~ 69 (83)
T 1veg_A 39 MGFDTVVAEAALRVFGGN-VQLAAQTLAHHGG 69 (83)
T ss_dssp HSCCHHHHHHHHHHTTTC-HHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHcCCC-HHHHHHHHHhCCC
Confidence 899999998888887765 4578999988766
No 98
>1ytr_A Bacteriocin plantaricin A; antibiotic, pheromone, amphipathic helix, micelle; NMR {Synthetic}
Probab=26.49 E-value=17 Score=18.56 Aligned_cols=9 Identities=33% Similarity=0.523 Sum_probs=7.0
Q ss_pred ceeeecccc
Q psy17184 189 TIIGLQAGS 197 (218)
Q Consensus 189 ~~i~lq~G~ 197 (218)
+..+||||.
T Consensus 3 sayslqmga 11 (26)
T 1ytr_A 3 SAYSLQMGA 11 (26)
T ss_dssp SCCCCCSSS
T ss_pred chHHHHhhH
Confidence 467899985
No 99
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.96 E-value=21 Score=22.62 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...+-..+.+-. .+.+..||..-.+
T Consensus 19 MGF~~~~a~~AL~~t~~n-ve~A~e~L~~~~~ 49 (63)
T 2dak_A 19 MGFSRDQALKALRATNNS-LERAVDWIFSHID 49 (63)
T ss_dssp HTCCHHHHHHHHHHTTSC-SHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCC-HHHHHHHHHhCCC
Confidence 788887777665555432 4578899976543
No 100
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=25.78 E-value=20 Score=24.58 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHhhC-CCCCCccchHHhhhchhHHHHHH
Q psy17184 71 QDKEAQAWIETVTG-QKFPAGVLYEDAIKDGQILCHLI 107 (218)
Q Consensus 71 ~e~~i~~wie~~l~-~~l~~~d~f~~~l~dG~iLc~L~ 107 (218)
..+.|..||..+.. ++++.. +|..--.||..||.+-
T Consensus 16 S~~~V~~WL~w~~~ef~L~~~-~~~~f~mdGk~Lc~Ls 52 (89)
T 1ji7_A 16 SRDDVAQWLKWAENEFSLRPI-DSNTFEMNGKALLLLT 52 (89)
T ss_dssp CHHHHHHHHHHHHHHTTCSCC-CTTTTCSCHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCC-chhcCCCCHHHHHcCC
Confidence 47789999987643 565543 3444457888888764
No 101
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.34 E-value=33 Score=23.96 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHhh-CCCCCCccchHHh-hhchhHHHHHHH
Q psy17184 71 QDKEAQAWIETVT-GQKFPAGVLYEDA-IKDGQILCHLIN 108 (218)
Q Consensus 71 ~e~~i~~wie~~l-~~~l~~~d~f~~~-l~dG~iLc~L~n 108 (218)
.++.|..||.-+. .+.++.. ++... -.+|.-||.+-.
T Consensus 28 s~~~V~~WL~W~~~ef~L~~v-~~~~F~~m~G~~LC~ls~ 66 (98)
T 1x66_A 28 TQEHVRQWLEWAIKEYSLMEI-DTSFFQNMDGKELCKMNK 66 (98)
T ss_dssp CTTHHHHHHHHHHHHTTCCSC-CGGGGTTCCHHHHHHCCH
T ss_pred CHHHHHHHHHHHHHhcCCCCC-ChhhCCCCCHHHHHcCCH
Confidence 3678999998754 4777654 35554 589999998653
No 102
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=24.77 E-value=29 Score=23.24 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCC---CCCCchhHHHHhhhhhHHHhhhh
Q psy17184 20 DKEAQAWIETVTGQ---KFPAGVLYEDAIKDGQILCHLIN 56 (218)
Q Consensus 20 ~~e~~~Wie~~~g~---~i~~~~~~~~~LkdGvvLC~L~n 56 (218)
++++..|+.-+..+ +++. .++..-=-||-.||.|-.
T Consensus 16 ~~~V~~WL~w~~~e~~l~l~~-~~~~~f~m~G~~Lc~ls~ 54 (82)
T 1sv0_C 16 RADVWKWLINMAVSEGLEVTA-ELPQKFPMNGKALCLMSL 54 (82)
T ss_dssp HHHHHHHHHHHHHHHTCCCCT-HHHHTCCSCHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHhCCCCCC-CccccCCCCHHHHHhCCH
Confidence 67899999766443 3332 233322369999998863
No 103
>2h7b_A Core-binding factor, ML1-ETO; helix bundle, transcription; NMR {Homo sapiens} SCOP: a.277.1.1 PDB: 2pp4_A 2knh_A
Probab=23.62 E-value=45 Score=23.66 Aligned_cols=37 Identities=5% Similarity=0.228 Sum_probs=29.9
Q ss_pred HHHccCChhHHHHHHHHHHHHhCCCCCCchhHHHHhhh
Q psy17184 10 KIAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKD 47 (218)
Q Consensus 10 k~~~ky~~~~~~e~~~Wie~~~g~~i~~~~~~~~~Lkd 47 (218)
+.+++.+++..+.+++-|..++.-+|++ ++|...|..
T Consensus 18 ~la~~~~pev~~~Vr~LVq~Ll~~~i~~-EeFt~~Lq~ 54 (105)
T 2h7b_A 18 QFGNDISPEIGERVRTLVLGLVNSTLTI-EEFHSKLQE 54 (105)
T ss_dssp HSHHHHCHHHHHHHHHHHHHHHTSSCCH-HHHHHHHHH
T ss_pred HHhccCChHHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 3455668999999999999999999875 468887766
No 104
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=22.99 E-value=30 Score=22.87 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=17.2
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIE 28 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie 28 (218)
||++++...+-..+.+-+. +.+.+||.
T Consensus 39 MGF~r~~a~~AL~~~~~nv-e~Ave~Ll 65 (73)
T 1vg5_A 39 MGFDRTQVEVALAAADDDL-TVAVEILM 65 (73)
T ss_dssp TTCCHHHHHHHHHHHTSCH-HHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCH-HHHHHHHH
Confidence 7888887776655554322 35677765
No 105
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=22.80 E-value=33 Score=23.69 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHhh-CCCCCCccchHHhhhchhHHHHHH
Q psy17184 71 QDKEAQAWIETVT-GQKFPAGVLYEDAIKDGQILCHLI 107 (218)
Q Consensus 71 ~e~~i~~wie~~l-~~~l~~~d~f~~~l~dG~iLc~L~ 107 (218)
..+.|..||..+. .+.++.. +|...-.||..||.+-
T Consensus 16 S~~~V~~WL~w~~~ef~L~~i-~~~~f~mdGk~Lc~Lt 52 (93)
T 2qar_B 16 SRDDVAQWLKWAENEFSLSPI-DSNTFEMNGKALLLLT 52 (93)
T ss_dssp CHHHHHHHHHHHHHHTTCCCC-CGGGGCSCHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCc-chhcCCCCHHHHHcCC
Confidence 4778999998754 3566543 2444457888888754
No 106
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=21.63 E-value=49 Score=19.66 Aligned_cols=27 Identities=4% Similarity=0.095 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHH
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIE 28 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie 28 (218)
||++++...+.....+. -++.+..||-
T Consensus 14 mGF~~~~a~~Al~a~~~-n~e~A~~~Lf 40 (47)
T 1dv0_A 14 LGFPESLVIQAYFACEK-NENLAANFLL 40 (47)
T ss_dssp TTCCHHHHHHHHTTTTS-CHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 78888888887777774 4567788874
No 107
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.61 E-value=35 Score=23.04 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=22.2
Q ss_pred CChHHHHHHHHHccCChhHHHHHHHHHHHHhC
Q psy17184 1 MSLQRQVAAKIAAKRNPEQDKEAQAWIETVTG 32 (218)
Q Consensus 1 ~gl~~e~~~k~~~ky~~~~~~e~~~Wie~~~g 32 (218)
||++++...+-....+- -.+.+..||..-.+
T Consensus 39 MGF~~~~a~~AL~~t~~-nve~A~ewL~~~~~ 69 (83)
T 2dai_A 39 MGFPENRATKALQLNHM-SVPQAMEWLIEHAE 69 (83)
T ss_dssp HTCCHHHHHHHHHHTTS-CHHHHHHHHHHGGG
T ss_pred cCCCHHHHHHHHHHhCC-CHHHHHHHHHHCCC
Confidence 78888887776665543 35678999987654
No 108
>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*
Probab=21.39 E-value=44 Score=27.61 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=19.1
Q ss_pred ccchhHHHHHHHHHHhCCCccC
Q psy17184 126 KFMENINNFQKAIKDYGVADID 147 (218)
Q Consensus 126 ~~~eNI~~Fl~~~~~~Gv~~~~ 147 (218)
.+.+.+..|+.+|+.+|+...+
T Consensus 249 ~Q~~~L~~Fy~~ck~~gi~~~~ 270 (271)
T 3zyl_A 249 TRMTRISEFLKVAEQVGIDRGD 270 (271)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHcCcCcCC
Confidence 5779999999999999997644
No 109
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.32 E-value=53 Score=22.67 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHhhC---CCCCCccchHHhhhchhHHHHHH
Q psy17184 71 QDKEAQAWIETVTG---QKFPAGVLYEDAIKDGQILCHLI 107 (218)
Q Consensus 71 ~e~~i~~wie~~l~---~~l~~~d~f~~~l~dG~iLc~L~ 107 (218)
.++.|..||.-+.. +.++.. +|...-.||.-||.+.
T Consensus 28 s~~~V~~WL~Wavke~~~dl~~i-~~~~f~m~G~~LC~ms 66 (92)
T 2e8p_A 28 SKTQVLDWISYQVEKNKYDASAI-DFSRCDMDGATLCNCA 66 (92)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSC-CTTTCCCCSHHHHHSC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCC-ChhhcCCCHHHHHcCC
Confidence 47899999998754 333332 3555578999999865
No 110
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=20.11 E-value=45 Score=23.78 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhh-CCCCCCccchHHhhhchhHHHHHHH
Q psy17184 71 QDKEAQAWIETVT-GQKFPAGVLYEDAIKDGQILCHLIN 108 (218)
Q Consensus 71 ~e~~i~~wie~~l-~~~l~~~d~f~~~l~dG~iLc~L~n 108 (218)
..+.+..||.-+. .+++++. ++...-.||.-||.+-.
T Consensus 45 S~~~V~~WL~W~~~ef~L~~v-~~~~F~m~G~~LC~ls~ 82 (110)
T 2jv3_A 45 TETHVRDWVMWAVNEFSLKGV-DFQKFCMSGAALCALGK 82 (110)
T ss_dssp CHHHHHHHHHHHHHHHTCCCC-CTTTTCCCHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHhcCCCCC-ChhcCCCCHHHHHhCCH
Confidence 4678999998654 3566543 24444689999998763
Done!