BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17185
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14318|MP20_DROME Muscle-specific protein 20 OS=Drosophila melanogaster GN=Mp20
PE=2 SV=2
Length = 184
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
IA+KRNPE DKEAQ WIE + +KFPAG YED +KDGQ+LC LIN L P +V K+NSSG
Sbjct: 11 IASKRNPEMDKEAQEWIEAIIAEKFPAGQSYEDVLKDGQVLCKLINVLSPNAVPKVNSSG 70
Query: 61 GQFKFMENIN 70
GQFKFMENIN
Sbjct: 71 GQFKFMENIN 80
>sp|Q24799|MYPH_ECHGR Myophilin OS=Echinococcus granulosus PE=2 SV=1
Length = 190
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ KR+ +Q+ EA WIE +TG K LYED +KDG +LC L+N +KPG + KIN +
Sbjct: 18 LEGKRDKDQENEALEWIEALTGLKLDRSKLYEDILKDGTVLCKLMNSIKPGCIKKINENA 77
Query: 61 GQ-FKFMENINKGL 73
FK MENI+ L
Sbjct: 78 TMPFKIMENISAFL 91
>sp|Q08092|CNN1_PIG Calponin-1 OS=Sus scrofa GN=CNN1 PE=2 SV=1
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + +Q++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQQEQELREWIEGVTGRRI--GNNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|Q08290|CNN1_RAT Calponin-1 OS=Rattus norvegicus GN=Cnn1 PE=2 SV=1
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GSNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|P51911|CNN1_HUMAN Calponin-1 OS=Homo sapiens GN=CNN1 PE=1 SV=2
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV KIN S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GNNFMDGLKDGIILCEFINKLQPGSVKKINEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|Q9GK38|CNN1_MUSPF Calponin-1 OS=Mustela putorius furo GN=CNN1 PE=2 SV=1
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GSNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|Q08091|CNN1_MOUSE Calponin-1 OS=Mus musculus GN=Cnn1 PE=2 SV=1
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GNNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|Q2HJ38|CNN1_BOVIN Calponin-1 OS=Bos taurus GN=CNN1 PE=2 SV=1
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GNNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|Q7YRL2|CNN1_SHEEP Calponin-1 OS=Ovis aries GN=CNN1 PE=2 SV=1
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K + ++++E + WIE VTG++ G + D +KDG ILC INKL+PGSV K+N S
Sbjct: 22 LAQKYDHQREQELREWIEGVTGRRI--GNNFMDGLKDGIILCEFINKLQPGSVKKVNEST 79
Query: 61 GQFKFMENIN---KGLTFIAITP 80
+ +ENI K +T + P
Sbjct: 80 QNWHQLENIGNFIKAITKYGVKP 102
>sp|P26932|CNN1_CHICK Calponin-1 OS=Gallus gallus GN=CNN1 PE=1 SV=2
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K +P+ +++ + WIE TG++ G + D +KDG ILC LINKL+PGSV K+N
Sbjct: 22 LAQKYDPQTERQLRVWIEGATGRRI--GDNFMDGLKDGVILCELINKLQPGSVQKVNDPV 79
Query: 61 GQFKFMENINKGLTFI 76
+ +ENI L I
Sbjct: 80 QNWHKLENIGNFLRAI 95
>sp|Q3SYU6|CNN2_BOVIN Calponin-2 OS=Bos taurus GN=CNN2 PE=2 SV=3
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ +K +P+++ E ++WIE +TG G ++ +KDG ILC L+NKL+PGSV KIN S
Sbjct: 22 LQSKYDPQKEAELRSWIEGLTG--LSVGPDFQKGLKDGIILCTLMNKLQPGSVPKINRSM 79
Query: 61 GQFKFMENIN 70
+ +EN++
Sbjct: 80 QNWHQLENLS 89
>sp|Q5RFN6|CNN2_PONAB Calponin-2 OS=Pongo abelii GN=CNN2 PE=2 SV=3
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ +K +P+++ E + WIE +TG G ++ +KDG ILC L+NKL+PGSV KIN S
Sbjct: 22 LLSKYDPQKEAELRTWIEGLTG--LSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSM 79
Query: 61 GQFKFMENIN 70
+ +EN++
Sbjct: 80 QNWHQLENLS 89
>sp|Q99439|CNN2_HUMAN Calponin-2 OS=Homo sapiens GN=CNN2 PE=1 SV=4
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ +K +P+++ E + WIE +TG G ++ +KDG ILC L+NKL+PGSV KIN S
Sbjct: 22 LLSKYDPQKEAELRTWIEGLTG--LSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSM 79
Query: 61 GQFKFMENIN 70
+ +EN++
Sbjct: 80 QNWHQLENLS 89
>sp|Q08094|CNN2_PIG Calponin-2 (Fragment) OS=Sus scrofa GN=CNN2 PE=2 SV=1
Length = 296
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ +K +P+++ E ++WIE +TG G ++ +KDG ILC L+NKL+PGSV KIN S
Sbjct: 22 LLSKYDPQKEAELRSWIEGLTG--LSIGPDFQKGLKDGIILCTLMNKLQPGSVPKINRSM 79
Query: 61 GQFKFMENIN 70
+ +EN++
Sbjct: 80 QNWHQLENLS 89
>sp|Q08093|CNN2_MOUSE Calponin-2 OS=Mus musculus GN=Cnn2 PE=2 SV=1
Length = 305
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+ +K +P+++ E ++WIE +TG G ++ +KDG ILC L+NKL+PGSV KIN S
Sbjct: 22 LLSKYDPQKEAELRSWIEGLTG--LSIGPDFQKGLKDGVILCTLMNKLQPGSVPKINRSM 79
Query: 61 GQFKFMENIN 70
+ +EN++
Sbjct: 80 QNWHQLENLS 89
>sp|Q32L92|CNN3_BOVIN Calponin-3 OS=Bos taurus GN=CNN3 PE=2 SV=1
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
IA+K + + +++ + WIE VTG G ++ +KDG ILC LINKL+PGSV K+N S
Sbjct: 20 IASKYDHQAEEDLRNWIEEVTGMSI--GANFQLGLKDGIILCELINKLQPGSVKKVNESS 77
Query: 61 GQFKFMENI 69
+ +ENI
Sbjct: 78 LNWPQLENI 86
>sp|P37397|CNN3_RAT Calponin-3 OS=Rattus norvegicus GN=Cnn3 PE=1 SV=1
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
IA+K + + +++ + WIE VTG G ++ +KDG ILC LINKL+PGSV K+N S
Sbjct: 20 IASKYDQQAEEDLRNWIEEVTGMGI--GTNFQLGLKDGIILCELINKLQPGSVKKVNESS 77
Query: 61 GQFKFMENI 69
+ +ENI
Sbjct: 78 LNWPQLENI 86
>sp|Q9DAW9|CNN3_MOUSE Calponin-3 OS=Mus musculus GN=Cnn3 PE=2 SV=1
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
IA+K + + +++ + WIE VTG G ++ +KDG ILC LINKL+PGSV K+N S
Sbjct: 20 IASKYDQQAEEDLRNWIEEVTG--LGIGTNFQLGLKDGIILCELINKLQPGSVKKVNESS 77
Query: 61 GQFKFMENI 69
+ +ENI
Sbjct: 78 LNWPQLENI 86
>sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS=Dictyostelium
discoideum GN=gxcB PE=2 SV=1
Length = 1198
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 2 AAKRNPEQDKEAQAWIETVTGQKF--PAGVLYEDAIKDGQILCHLINKLKPGSVAKINSS 59
A K +PE K AQ WIE VT +KF P+ + ++KDG +LC +IN + P ++ IN+
Sbjct: 336 AFKFSPELQKAAQDWIEEVTKEKFKLPS---FSSSLKDGILLCRVINTIIPNTILYINNG 392
Query: 60 GGQFKFMENIN---KGLTFIAI-------TPQVFSNDSI 88
FK MENI KG + + TP +F +I
Sbjct: 393 NSSFKKMENIGNYLKGCLVVGLKKTDLFDTPDLFEEKNI 431
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 3 AKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQ 62
AK + ++ A+ W+ V + + + K+G +LC LINKL+ G++ +IN S
Sbjct: 122 AKYDSSLEQTARKWVCDVLEIQLEDDKTFYELFKNGVLLCRLINKLRGGTIKRINESTIS 181
Query: 63 FKFMENINKGL 73
FK +ENI L
Sbjct: 182 FKQLENIENYL 192
>sp|Q15417|CNN3_HUMAN Calponin-3 OS=Homo sapiens GN=CNN3 PE=1 SV=1
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
IA+K + + +++ + WIE VTG G ++ +KDG ILC LINKL+PGSV K+N S
Sbjct: 20 IASKYDHQAEEDLRNWIEEVTGMSI--GPNFQLGLKDGIILCELINKLQPGSVKKVNESS 77
Query: 61 GQFKFMENI 69
+ +ENI
Sbjct: 78 LNWPQLENI 86
>sp|P37803|CNN1_MELGA Calponin-1 (Fragment) OS=Meleagris gallopavo GN=CNN1 PE=1 SV=1
Length = 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSG 60
+A K +P+ +++ + WIE TG++ G + D +KDG IL LINKL+PGSV K+N
Sbjct: 16 LAQKYDPQTERQLRVWIEGATGRRI--GDNFXDGLKDGVILMELINKLQPGSVQKVNDPV 73
Query: 61 GQFKFMENINKGLTFI 76
+ +ENI L I
Sbjct: 74 QNWHKLENIGNFLRAI 89
>sp|Q55GV9|LIMCH_DICDI Calponin homology and LIM domain-containing protein
OS=Dictyostelium discoideum GN=ChLim PE=1 SV=1
Length = 686
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 12 EAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSS-GGQFKFMENI 69
E++ WIE V QKFP+ ++ +++DG LC LIN+++P SV K N S F ENI
Sbjct: 20 ESRDWIERVINQKFPSD--FQSSLRDGIFLCKLINQIQPNSVPKYNQSPSTDFAKRENI 76
>sp|O14188|RNG2_SCHPO Ras GTPase-activating-like protein rng2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rng2 PE=1 SV=1
Length = 1489
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 12 EAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGG-QFKFMENIN 70
EA+ WIE G +E ++++G +L L+ K +P + KI S QF+ +NIN
Sbjct: 46 EAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNIN 105
Query: 71 KGLTFIAIT--PQVFSNDSITIHSG 93
K L FI P++F + I+ G
Sbjct: 106 KFLDFIHGIGLPEIFHFELTDIYEG 130
>sp|Q3UH68|LIMC1_MOUSE LIM and calponin homology domains-containing protein 1 OS=Mus
musculus GN=Limch1 PE=1 SV=2
Length = 1057
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 12 EAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN 57
EAQ WIE VTG+ F + +++G +LC L+N +KPG V KIN
Sbjct: 26 EAQKWIEQVTGRSF-GDKDFRTGLENGILLCELLNAIKPGLVKKIN 70
>sp|Q3KQW7|LIMC1_XENLA LIM and calponin homology domains-containing protein 1 OS=Xenopus
laevis GN=limch1 PE=2 SV=1
Length = 1083
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 12 EAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENI 69
EAQ WIE VTG+ F + +++G +LC L+N +KPG V KIN ++NI
Sbjct: 26 EAQKWIEQVTGKSF-GDRDFRTGLENGILLCELLNAIKPGLVKKINRLPTPIAGLDNI 82
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 12 EAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENI 69
EAQ WIE VTG+ F + +++G +LC L+N +KPG V KIN ++NI
Sbjct: 26 EAQKWIEQVTGRSF-GDKDFRTGLENGILLCELLNAIKPGLVKKINRLPTPIAGLDNI 82
>sp|Q8WWI1|LMO7_HUMAN LIM domain only protein 7 OS=Homo sapiens GN=LMO7 PE=1 SV=3
Length = 1683
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 8 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFME 67
EQ+ I+ VT + F + ++++G +LC LINKLKPG + KIN ++
Sbjct: 65 EQNSGRTILIKAVTEKNFETKD-FRASLENGVLLCDLINKLKPGVIKKINRLSTPIAGLD 123
Query: 68 NINKGLTFIAITPQVFSNDSITIHSG 93
NIN F+ Q+ ++ H G
Sbjct: 124 NIN---VFLKACEQIGLKEAQLFHPG 146
>sp|Q9WVA4|TAGL2_MOUSE Transgelin-2 OS=Mus musculus GN=Tagln2 PE=1 SV=4
Length = 199
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 16 WIETV----TGQKFPAGVLYEDAIKDGQILCHLINKLKP---GSVAKINSSGGQFKFMEN 68
WI T GQ P ++ +KDG +LC LIN L P V KI +S FK ME
Sbjct: 33 WITTQCREDVGQPQPGRENFQKWLKDGTVLCKLINSLYPEGQAPVKKIQASSMAFKQMEQ 92
Query: 69 INKGL 73
I++ L
Sbjct: 93 ISQFL 97
>sp|Q5XFX0|TAGL2_RAT Transgelin-2 OS=Rattus norvegicus GN=Tagln2 PE=1 SV=1
Length = 199
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 1 IAAKRNPEQDKEAQAWIETV----TGQKFPAGVLYEDAIKDGQILCHLINKLKP---GSV 53
I + +P+ ++ WI T Q P +++ +KDG +LC LIN L P V
Sbjct: 18 IEKQYDPDLEQILIQWITTQCRKGVSQPQPGRENFQNWLKDGTVLCELINSLYPEGQAPV 77
Query: 54 AKINSSGGQFKFMENINKGL 73
KI +S FK ME I++ L
Sbjct: 78 KKIQASTMAFKQMEQISQFL 97
>sp|P41737|LRCH1_FELCA Leucine-rich repeat and calponin homology domain-containing protein
1 (Fragment) OS=Felis catus PE=2 SV=2
Length = 251
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 4 KRNPEQDKEAQAWIETV--TGQKFPAGVLYED---AIKDGQILCHLINKLKPGSVAKIN 57
+R EQ +E + +E + + + L+ED A+ DG +LCHL+N ++P SVA I+
Sbjct: 125 RRKMEQMREEKELVEHLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIH 183
>sp|Q54TK8|GEFP_DICDI Ras guanine nucleotide exchange factor P OS=Dictyostelium
discoideum GN=gefP PE=2 SV=1
Length = 1502
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENI 69
D + WI T K + +++K+G LC +IN +KP ++ KIN + F + EN+
Sbjct: 87 DNQVLDWIFNQTKTKISKPIC--ESLKNGVALCKIINLIKPNTIKKINLNSSIFSYRENL 144
Query: 70 ---NKGLTFIAIT 79
KG I +T
Sbjct: 145 TNFTKGCESIGMT 157
>sp|P37802|TAGL2_HUMAN Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3
Length = 199
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 16 WIETV----TGQKFPAGVLYEDAIKDGQILCHLINKLKP---GSVAKINSSGGQFKFMEN 68
WI T G+ P +++ +KDG +LC LIN L P V KI +S FK ME
Sbjct: 33 WITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQ 92
Query: 69 INKGL 73
I++ L
Sbjct: 93 ISQFL 97
>sp|Q5E9F5|TAGL2_BOVIN Transgelin-2 OS=Bos taurus GN=TAGLN2 PE=2 SV=3
Length = 199
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 16 WIETV----TGQKFPAGVLYEDAIKDGQILCHLINKLKP---GSVAKINSSGGQFKFMEN 68
WI T G+ P +++ +KDG +LC LIN L P V KI +S FK ME
Sbjct: 33 WITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINGLYPEGQAPVKKIQASTMAFKQMEQ 92
Query: 69 INKGL 73
I++ L
Sbjct: 93 ISQFL 97
>sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
Length = 987
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
Query: 12 EAQAWIETV----TGQKFPAGVLYED---AIKDGQILCHLINKLKPGSVAKI-------- 56
EA W+ + G+ FP E+ ++ G +LC+++NK+ PGSV+K+
Sbjct: 49 EAAGWLRDMIGVSNGKDFPGEPSEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDDVA 108
Query: 57 -NSSGGQFKFMENINKGLTFI 76
++ F++ ENI L I
Sbjct: 109 DGAALSAFQYFENIRNFLVAI 129
>sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
1 OS=Homo sapiens GN=LRCH1 PE=1 SV=3
Length = 728
Score = 35.8 bits (81), Expect = 0.085, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
Query: 30 LYED---AIKDGQILCHLINKLKPGSVAKIN 57
L+ED A+ DG +LCHL+N ++P SVA I+
Sbjct: 598 LHEDLGAALMDGVVLCHLVNHIRPRSVASIH 628
>sp|O14185|STG1_SCHPO Transgelin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=stg1 PE=4 SV=1
Length = 174
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENI 69
+KEA+ WIE K A + D ++ G ILC I K G+ + S F MENI
Sbjct: 6 EKEAREWIEETLHTKLNAQLDLLDQLQSGVILCR-ICKEALGANIRYKESNMPFVQMENI 64
Query: 70 NKGLTFIAITPQVFSND 86
+ + + V S D
Sbjct: 65 SAFINYAQQVVHVPSQD 81
>sp|P62046|LRCH1_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
1 OS=Mus musculus GN=Lrch1 PE=1 SV=2
Length = 709
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 4 KRNPEQDKEAQAWIETV--TGQKFPAGVLYED---AIKDGQILCHLINKLKPGSVAKIN 57
+R EQ +E + +E + + + L+ED A+ DG +LCHL N ++P SVA I+
Sbjct: 583 RRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHVRPRSVASIH 641
>sp|Q5R6R2|TAGL3_PONAB Transgelin-3 OS=Pongo abelii GN=TAGLN3 PE=2 SV=1
Length = 199
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL----TFIAI 78
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L T+
Sbjct: 47 PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVR 106
Query: 79 TPQVF 83
T +F
Sbjct: 107 TTDIF 111
>sp|P37805|TAGL3_RAT Transgelin-3 OS=Rattus norvegicus GN=Tagln3 PE=1 SV=2
Length = 199
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL 73
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L
Sbjct: 47 PGRTHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFL 97
>sp|Q4R5J4|TAGL3_MACFA Transgelin-3 OS=Macaca fascicularis GN=TAGLN3 PE=2 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL----TFIAI 78
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L T+
Sbjct: 47 PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVR 106
Query: 79 TPQVF 83
T +F
Sbjct: 107 TTDIF 111
>sp|Q9UI15|TAGL3_HUMAN Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2
Length = 199
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL----TFIAI 78
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L T+
Sbjct: 47 PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVR 106
Query: 79 TPQVF 83
T +F
Sbjct: 107 TTDIF 111
>sp|Q9R1Q8|TAGL3_MOUSE Transgelin-3 OS=Mus musculus GN=Tagln3 PE=1 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL 73
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L
Sbjct: 47 PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFL 97
>sp|Q3ZBY2|TAGL3_BOVIN Transgelin-3 OS=Bos taurus GN=TAGLN3 PE=2 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 26 PAGVLYEDAIKDGQILCHLINKLKPGS---VAKINSSGGQFKFMENINKGL 73
P ++ + DG +LC LIN L P + KI+ S FK ME I++ L
Sbjct: 47 PGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFL 97
>sp|Q08873|SCP1_YEAST Transgelin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCP1 PE=1 SV=1
Length = 200
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 3 AKRNPEQDKEAQAWI-ETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN---- 57
+K +PE + + W+ ++V + P G L E +KDG +LC L N L + N
Sbjct: 22 SKFSPEAIQNIKIWVYKSVLKEIAPPGDLLE-CLKDGTVLCKLANILYEADTGEANHISW 80
Query: 58 -SSGGQFKFMENINKGLTF 75
SS F M+ I++ L+F
Sbjct: 81 KSSKMPFVQMDQISQFLSF 99
>sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens
GN=ARHGEF6 PE=1 SV=2
Length = 776
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 32 EDAIKDGQILCHLINKLKPGSVAK 55
+ ++K+G +LC LIN+L PGSV K
Sbjct: 32 KSSLKNGVVLCKLINRLMPGSVEK 55
>sp|P32926|DSG3_HUMAN Desmoglein-3 OS=Homo sapiens GN=DSG3 PE=1 SV=2
Length = 999
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 51 GSVAKINSSGGQFKFMENINKGLTFIA---ITPQVFSNDSITIHSGTGS-HLTQPEWGRE 106
G I+S + KF++N+N+ TFI IT +V + D T + TG+ ++ P++
Sbjct: 432 GGYLMIDSKTAEIKFVKNMNRDSTFIVNKTITAEVLAIDEYTGKTSTGTVYVRVPDFNDN 491
Query: 107 KPAA 110
P A
Sbjct: 492 CPTA 495
>sp|Q8K4I3|ARHG6_MOUSE Rho guanine nucleotide exchange factor 6 OS=Mus musculus
GN=Arhgef6 PE=1 SV=1
Length = 771
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 32 EDAIKDGQILCHLINKLKPGSVAK 55
+ ++K+G +LC LIN+L PGSV K
Sbjct: 32 KSSLKNGVVLCKLINRLLPGSVEK 55
>sp|P52735|VAV2_HUMAN Guanine nucleotide exchange factor VAV2 OS=Homo sapiens GN=VAV2
PE=1 SV=2
Length = 878
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 FPAGVLYE--DAIKDGQILCHLINKLKPGSV--AKIN--SSGGQFKFMENINKGLTFIAI 78
+P+ V+++ A++DG +LC L++ L PGS+ IN QF ++NI TF+ +
Sbjct: 25 WPSAVVFDLAQALRDGVLLCQLLHNLSPGSIDLKDINFRPQMSQFLCLKNIR---TFLKV 81
Query: 79 TPQVF 83
F
Sbjct: 82 CHDKF 86
>sp|Q60992|VAV2_MOUSE Guanine nucleotide exchange factor VAV2 OS=Mus musculus GN=Vav2
PE=1 SV=1
Length = 868
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 FPAGVLYE--DAIKDGQILCHLINKLKPGSV--AKIN--SSGGQFKFMENINKGLTFIAI 78
+P+ V+++ A++DG +LC L++ L PGS+ IN QF ++NI TF+ +
Sbjct: 25 WPSAVVFDLAQALRDGVLLCQLLHNLSPGSIDLKDINFRPQMSQFLCLKNIR---TFLKV 81
Query: 79 TPQVF 83
F
Sbjct: 82 CHDKF 86
>sp|Q5VUJ6|LRCH2_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
2 OS=Homo sapiens GN=LRCH2 PE=2 SV=2
Length = 765
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 34 AIKDGQILCHLINKLKPGSVAKIN 57
A+ DG +LCHL N ++P SVA I+
Sbjct: 671 ALMDGVVLCHLANHIRPRSVASIH 694
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,300,109
Number of Sequences: 539616
Number of extensions: 2006011
Number of successful extensions: 3283
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3205
Number of HSP's gapped (non-prelim): 77
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)