Query psy17185
Match_columns 121
No_of_seqs 119 out of 888
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:02:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wym_A Transgelin-2; CH domain 100.0 2.3E-37 7.8E-42 224.3 11.9 116 1-118 10-151 (155)
2 1wyn_A Calponin-2; CH domain, 100.0 1.2E-36 4E-41 218.8 11.0 115 1-118 10-139 (146)
3 1wyp_A Calponin 1; CH domain, 100.0 1E-36 3.6E-41 216.7 9.6 105 1-109 10-129 (136)
4 1ujo_A Transgelin; CH domain, 100.0 1.2E-36 4E-41 218.3 9.2 107 2-108 3-135 (144)
5 1h67_A Calponin alpha; cytoske 100.0 2.1E-33 7.2E-38 192.5 6.1 91 7-99 2-107 (108)
6 1p2x_A RNG2 protein, RAS GTPas 100.0 4.1E-32 1.4E-36 197.4 10.3 101 9-111 12-128 (159)
7 2rr8_A Iqgap1 protein; F-actin 100.0 5.9E-33 2E-37 207.0 5.9 107 2-111 20-151 (190)
8 1p5s_A RAS GTPase-activating-l 100.0 7.2E-32 2.5E-36 203.0 7.2 107 3-111 49-172 (203)
9 1wyr_A RHO guanine nucleotide 100.0 2.2E-31 7.5E-36 186.0 7.5 98 6-103 4-120 (121)
10 3i6x_A P195, RAS GTPase-activa 100.0 2.5E-30 8.4E-35 193.3 8.0 106 3-111 43-173 (193)
11 2l3g_A RHO guanine nucleotide 100.0 3.2E-30 1.1E-34 181.3 7.1 95 6-100 10-124 (126)
12 3ky9_A Proto-oncogene VAV; cal 99.8 9.1E-22 3.1E-26 165.4 7.7 92 7-98 4-123 (587)
13 2yrn_A Neuron navigator 2 isof 99.8 7.9E-19 2.7E-23 122.9 6.4 97 2-98 12-124 (129)
14 1pxy_A Fimbrin-like protein; c 99.7 1E-16 3.6E-21 133.2 6.8 86 3-88 2-109 (506)
15 1aoa_A T-fimbrin; actin-bindin 99.6 3.5E-16 1.2E-20 121.2 8.3 88 1-88 17-125 (275)
16 1wku_A Alpha-actinin 3; calpon 99.6 9.1E-17 3.1E-21 123.6 2.9 86 2-87 21-115 (254)
17 1rt8_A Fimbrin; filamentous ac 99.6 7.7E-15 2.6E-19 122.2 8.4 87 2-88 6-118 (513)
18 2wa7_A Filamin-B; disease muta 99.5 3.4E-15 1.1E-19 114.1 3.9 87 2-88 14-111 (245)
19 2qjz_A Microtubule-associated 99.5 3.7E-14 1.3E-18 99.1 7.0 64 10-77 7-73 (123)
20 1wyo_A Protein EB3, microtubul 99.5 2.5E-14 8.4E-19 103.8 6.3 70 4-77 18-90 (159)
21 1dxx_A Dystrophin; structural 99.4 4.4E-14 1.5E-18 107.9 3.5 86 2-88 10-105 (246)
22 1sh5_A Plectin 1, PLTN, PCN; a 99.4 6.5E-14 2.2E-18 106.7 3.7 86 2-88 6-105 (245)
23 3f7p_A Plectin-1; plakin, hemi 99.4 8.2E-14 2.8E-18 109.6 3.1 86 1-87 66-160 (296)
24 1sjj_A Actinin; 3-helix bundle 99.3 1.4E-12 4.8E-17 112.7 3.6 88 1-88 1-97 (863)
25 1rt8_A Fimbrin; filamentous ac 99.2 2.9E-11 1E-15 100.6 7.2 78 9-88 286-380 (513)
26 3hoc_A Filamin-A; calponin hom 99.1 3.6E-11 1.2E-15 93.5 3.9 82 7-88 46-138 (272)
27 2vzc_A Alpha-parvin; membrane, 99.0 1.4E-10 4.9E-15 81.3 4.2 79 10-88 24-114 (131)
28 1pxy_A Fimbrin-like protein; c 98.9 1.1E-09 3.7E-14 91.0 6.2 79 8-88 276-367 (506)
29 4b7l_A Filamin-B; structural p 98.8 3E-09 1E-13 84.9 3.9 79 10-88 19-108 (347)
30 1wjo_A T-plastin; CH domain, a 98.3 7.7E-07 2.6E-11 61.9 4.1 79 9-87 8-100 (124)
31 2r8u_A Microtubule-associated 97.7 7.8E-05 2.7E-09 57.8 7.0 61 10-74 17-80 (268)
32 2d87_A Smoothelin splice isofo 97.6 4.2E-05 1.4E-09 53.1 3.7 66 9-77 8-75 (128)
33 4abo_I MAL3, microtubule integ 97.5 0.00023 7.8E-09 50.6 6.3 64 9-77 7-73 (145)
34 2d89_A EHBP1 protein; all alph 97.4 0.00035 1.2E-08 47.7 6.2 73 9-85 10-93 (119)
35 2qjx_A Protein BIM1; calponin 97.2 0.00096 3.3E-08 46.4 6.4 64 9-77 11-77 (127)
36 4b7l_A Filamin-B; structural p 97.1 0.0012 4E-08 52.5 6.6 102 9-119 141-255 (347)
37 2d88_A Protein mical-3; all al 97.0 0.00093 3.2E-08 45.7 4.7 65 10-77 11-77 (121)
38 1wyq_A Spectrin beta chain, br 97.0 0.00092 3.1E-08 46.2 4.7 63 10-77 9-75 (127)
39 1wyl_A NEDD9 interacting prote 96.9 0.0024 8.2E-08 43.3 6.0 65 8-77 7-75 (116)
40 1dxx_A Dystrophin; structural 96.8 0.001 3.5E-08 50.2 3.7 91 9-102 136-241 (246)
41 1wku_A Alpha-actinin 3; calpon 96.7 0.0017 5.8E-08 49.3 4.8 75 9-86 141-226 (254)
42 1bkr_A Spectrin beta chain; fi 96.6 0.0044 1.5E-07 41.5 5.5 66 9-77 4-71 (109)
43 1bhd_A Utrophin; calponin homo 96.5 0.0012 4.2E-08 44.9 2.4 64 9-77 9-76 (118)
44 1sh5_A Plectin 1, PLTN, PCN; a 96.5 0.0035 1.2E-07 47.1 5.2 89 9-102 134-238 (245)
45 2wa7_A Filamin-B; disease muta 96.3 0.0052 1.8E-07 46.3 5.1 66 9-77 144-209 (245)
46 1aoa_A T-fimbrin; actin-bindin 96.2 0.0024 8.1E-08 48.9 2.9 76 10-85 170-261 (275)
47 3f7p_A Plectin-1; plakin, hemi 95.9 0.0091 3.1E-07 46.6 4.9 65 9-77 190-257 (296)
48 3hoc_A Filamin-A; calponin hom 95.9 0.01 3.5E-07 45.7 5.1 65 9-77 171-236 (272)
49 2ee7_A Sperm flagellar protein 95.0 0.12 4.1E-06 35.6 7.5 73 3-77 10-85 (127)
50 1sjj_A Actinin; 3-helix bundle 93.8 0.021 7.2E-07 49.2 1.7 73 10-86 123-207 (863)
51 1wix_A HOOK homolog 1, RSGI RU 93.3 0.14 4.8E-06 36.5 5.2 70 5-77 6-82 (164)
52 1sv0_C Modulator of the activi 54.6 2.6 8.8E-05 26.4 -0.0 36 10-46 16-54 (82)
53 3ro3_B Minsc, peptide of prote 35.5 20 0.00068 17.0 1.4 11 10-20 7-17 (22)
54 1ji7_A ETS-related protein TEL 35.3 4.4 0.00015 25.9 -1.2 36 10-46 17-53 (89)
55 2e8p_A ELF3 protein; cell-free 32.5 6.5 0.00022 25.4 -0.8 40 6-46 23-67 (92)
56 2l2d_A OTU domain-containing p 31.8 8.4 0.00029 23.6 -0.3 26 63-88 15-44 (73)
57 2qar_B Telsam domain; polymer, 31.4 6.9 0.00024 25.1 -0.8 35 10-45 17-52 (93)
58 1sxd_A GA repeat binding prote 28.8 12 0.00041 23.9 0.0 36 10-46 28-64 (91)
59 1dv5_A APO-DCP, APO-D-alanyl c 28.3 93 0.0032 18.2 4.7 69 7-75 3-78 (80)
60 1sv0_A ETS DNA-binding protein 27.4 8.9 0.0003 24.2 -0.8 36 10-46 15-51 (85)
61 1hlv_A CENP-B, major centromer 26.0 67 0.0023 20.4 3.4 23 5-27 73-95 (131)
62 1x66_A Friend leukemia integra 24.8 11 0.00038 24.4 -0.7 36 10-46 29-66 (98)
63 2cq8_A 10-formyltetrahydrofola 23.8 99 0.0034 20.1 3.9 41 9-49 26-68 (110)
No 1
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=224.34 Aligned_cols=116 Identities=23% Similarity=0.318 Sum_probs=106.3
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCCCCCc----chHHHHhhhHHHHHHHHHhhcC---CCcccccCCCCchhHHHHHHHHH
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQKFPAG----VLYEDAIKDGQILCHLINKLKP---GSVAKINSSGGQFKFMENINKGL 73 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~~~~~----~~~~~~LrDGviLC~L~N~l~P---~~v~ki~~~~~~f~~~eNI~~FL 73 (121)
+++|||+++++++++||+++++++++.+ ++|+++||||||||+|+|.++| ++|++|+.++++|+++|||+.||
T Consensus 10 ~~~ky~~~~e~e~~~WIe~~l~~~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~kIn~~~~~F~~~eNI~~FL 89 (155)
T 1wym_A 10 IEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFL 89 (155)
T ss_dssp CCCSCCHHHHHHHHHHHHHHSSSCCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCCCCCCCCCHHHHHHHHHHHH
T ss_pred HHccCCHHHHHHHHHHHHHHhCCCCCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcCcccCCCccccHHHHHHHHH
Confidence 5799999999999999999999999863 5899999999999999999999 99999999999999999999999
Q ss_pred Hhhh----------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccC----CCCCCCCCC
Q psy17185 74 TFIA----------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPA----ACDCPDGHP 118 (121)
Q Consensus 74 ~ac~----------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~----~~~~~~~~~ 118 (121)
++|+ +++||||++|+ ||++|+++|++++. ||.++ .|+..++|+
T Consensus 90 ~ac~~~Gv~~~~lF~t~DL~e~kn~~~Vi~cL~aL~~~a~~~~~--gp~~g~p~~~~k~a~~n~ 151 (155)
T 1wym_A 90 QAAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDD--GLFSGDPNWFPKKSKESG 151 (155)
T ss_dssp HHHHHHTCCTTTCCCHHHHHTCSCHHHHHHHHHHHHHHHTTCSS--SCCCSCSSSSCCCCCCCC
T ss_pred HHHHHcCCCccccCChHHHHhcCCHHHHHHHHHHHHHHHHHCCC--CCcCCCCCCCCcccccCC
Confidence 9999 89999999998 99999999998864 77766 467777776
No 2
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=218.77 Aligned_cols=115 Identities=27% Similarity=0.485 Sum_probs=101.5
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--- 77 (121)
+++|||+++++++++||+++++++++. +|++.||||||||+|+|.++|++|++|+.++++|+++|||+.||++|+
T Consensus 10 ~~~ky~~~~~~e~~~WIe~~l~~~i~~--~l~~~L~DGvvLCkL~N~l~P~~v~kin~~~~~f~~~eNI~~FL~a~~~~G 87 (146)
T 1wyn_A 10 LLSKYDPQKEAELRTWIEGLTGLSIGP--DFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYG 87 (146)
T ss_dssp CCSCCCTTHHHHHHHHHHHHHCCCCCS--CHHHHHHTTSHHHHHHHHHCTTSCSCCCCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred HHccCCHHHHHHHHHHHHHHhCCCCcH--HHHHHHccHHHHHHHHHHhCCCCccccccccccccHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999953 799999999999999999999999999999999999999999999999
Q ss_pred -------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccCCCCCCCCCC
Q psy17185 78 -------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPAACDCPDGHP 118 (121)
Q Consensus 78 -------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~~~~~~~~~~ 118 (121)
+++||||++|+ ||++|+++|++.+-+.||.++ |+.+++|+
T Consensus 88 v~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~a~~~g~~~~p~~g-~k~a~~~~ 139 (146)
T 1wyn_A 88 MNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDIG-VKYSEKQE 139 (146)
T ss_dssp CCSSSCCCHHHHHTCSCSHHHHHHHHHHHHHHGGGTSCCCSCCC-CCCCCCCC
T ss_pred CCcccccChhHHHhcCChHHHHHHHHHHHHHHHhCCCCCCCccc-eeccccCC
Confidence 89999999998 999999999886544555432 44444444
No 3
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=216.72 Aligned_cols=105 Identities=34% Similarity=0.547 Sum_probs=97.6
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--- 77 (121)
+++|||+++++++++||++++++++++ +|++.|||||+||+|+|.++|++|++|+.++++|+++|||+.||++|+
T Consensus 10 ~~~ky~~~~~~e~~~WIe~~l~~~~~~--~l~~~L~DGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~~~G 87 (136)
T 1wyp_A 10 LAQKYDHQREQELREWIEGVTGRRIGN--NFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYG 87 (136)
T ss_dssp CCSSCCHHHHHHHHHHHHHHTCCCCCS--CTTHHHHTSHHHHHHHHHHSTTSSSCCCCSSCSHHHHHHHHHHHHHHHHHT
T ss_pred HHccCCHHHHHHHHHHHHHHhCCCCcH--HHHHHHccHHhHHHHHHhhCCCCcccccccccchHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999964 799999999999999999999999999999999999999999999999
Q ss_pred -------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccC
Q psy17185 78 -------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPA 109 (121)
Q Consensus 78 -------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~ 109 (121)
+++||||++|+ ||++|+++|++++ .||.++
T Consensus 88 v~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~a~~~g--~~p~~g 129 (136)
T 1wyp_A 88 VKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKG--NKVNVG 129 (136)
T ss_dssp CCGGGCCCHHHHHSCSCSHHHHHHHHHHHHHHHHHT--CCCCCC
T ss_pred CCcccccCchHHhcCCCHHHHHHHHHHHHHHHHHCC--CCCcCc
Confidence 89999999998 9999999998866 566544
No 4
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=100.00 E-value=1.2e-36 Score=218.29 Aligned_cols=107 Identities=21% Similarity=0.281 Sum_probs=99.3
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCCCC----cchHHHHhhhHHHHHHHHHhhcC---CCcc-cccCCCCchhHHHHHHHHH
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKFPA----GVLYEDAIKDGQILCHLINKLKP---GSVA-KINSSGGQFKFMENINKGL 73 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~~~----~~~~~~~LrDGviLC~L~N~l~P---~~v~-ki~~~~~~f~~~eNI~~FL 73 (121)
++|||+++++++++||++++++++++ .++|++.||||||||+|+|.|+| ++|+ +|+.++++|+++|||++||
T Consensus 3 ~~~y~~~~e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin~~~~~f~~~eNI~~FL 82 (144)
T 1ujo_A 3 SGSSGEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFL 82 (144)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSSCCCSHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeecCCCchhHHHHHHHHHH
Confidence 68999999999999999999999862 35799999999999999999999 8998 9999999999999999999
Q ss_pred Hhhh----------hccceecCCCh-----hHHHHHHhhhcCC--CCCC-ccc
Q psy17185 74 TFIA----------ITPQVFSNDSI-----TIHSGTGSHLTQP--EWGR-EKP 108 (121)
Q Consensus 74 ~ac~----------~~~DLfe~kn~-----~L~aL~~~a~~~~--~~~g-p~~ 108 (121)
++|+ +++||||+||+ ||++|++++++++ .|.| |.+
T Consensus 83 ~ac~~~Gv~~~~lF~t~DL~e~kn~~~V~~cL~aL~~~a~~~~~~~~~g~P~~ 135 (144)
T 1ujo_A 83 KAAEDYGVIKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVTKNDGNYRGDPNW 135 (144)
T ss_dssp HHHHHHTCCSSSCCCHHHHHTCSCHHHHHHHHHHHHHHHHHHCSSCCSSCSTT
T ss_pred HHHHHcCcCccccCChhHHHhcCCHHHHHHHHHHHHHHHHHcCCCCcCCCCCC
Confidence 9999 89999999998 9999999998765 9999 664
No 5
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=99.98 E-value=2.1e-33 Score=192.54 Aligned_cols=91 Identities=36% Similarity=0.604 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---------
Q psy17185 7 PEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--------- 77 (121)
Q Consensus 7 ~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--------- 77 (121)
|+.++++++||++++++++++ +|+++||||++||+|+|.++||+|++|+.++++|+++|||+.||++|+
T Consensus 2 ~~~e~e~~~WIe~~l~~~~~~--~l~~~L~dGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~l 79 (108)
T 1h67_A 2 PQTERQLRVWIEGATGRRIGD--NFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDI 79 (108)
T ss_dssp CCSSHHHHHHHHHHHSCCCCS--CHHHHHHHCSHHHHHHHHHSTTSSTTCCCTTSSHHHHHHHHHHHHHHHHHTSCGGGS
T ss_pred hHHHHHHHHHHHHHhCCCCcH--HHHHHHccHHHHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHHHcCCCcccc
Confidence 467899999999999999954 799999999999999999999999999999999999999999999999
Q ss_pred -hccceecCCCh-----hHHHHHHhhhc
Q psy17185 78 -ITPQVFSNDSI-----TIHSGTGSHLT 99 (121)
Q Consensus 78 -~~~DLfe~kn~-----~L~aL~~~a~~ 99 (121)
++.||||++|+ ||++|+++|++
T Consensus 80 F~~~DL~e~kn~~~V~~~l~aL~~~a~~ 107 (108)
T 1h67_A 80 FEANDLFENTNHTQVQSTLIALASQAKT 107 (108)
T ss_dssp CCHHHHHHTCCSHHHHHHHHHHHHHHHH
T ss_pred cChhHHHhCCChHHHHHHHHHHHHHHcc
Confidence 89999999999 99999999976
No 6
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.97 E-value=4.1e-32 Score=197.40 Aligned_cols=101 Identities=26% Similarity=0.389 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccC-CCCchhHHHHHHHHHHhhh----------
Q psy17185 9 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINKGLTFIA---------- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~-~~~~f~~~eNI~~FL~ac~---------- 77 (121)
.++++++||++++++++|++++|.++||||||||+|+|.++|++|++|+. ++++|+++|||+.||++|+
T Consensus 12 ~~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF 91 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEIFHF 91 (159)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHHHcCCCccccc
Confidence 46899999999999999977789999999999999999999999999986 6789999999999999999
Q ss_pred hccceecCCCh-----hHHHHHHhhhcCCCCCCcccCCC
Q psy17185 78 ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPAAC 111 (121)
Q Consensus 78 ~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~~~ 111 (121)
+++||||++|+ ||++|++++++.+ .||++++.
T Consensus 92 ~~~DL~e~kn~~~Vi~~L~aL~~~~~~~g--~~p~~~~~ 128 (159)
T 1p2x_A 92 ELTDIYEGKNLPKVIYCIHALSYFLSMQD--LAPPLIKS 128 (159)
T ss_dssp CHHHHSSCSCHHHHHHHHHHHHHHHHTTT--SSCCCCCC
T ss_pred CHHHHHhcCCHHHHHHHHHHHHHHHhhCC--CCCCchhh
Confidence 89999999999 9999999998875 48887754
No 7
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=99.97 E-value=5.9e-33 Score=206.96 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=96.7
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--ccc--------cCCCCchhHHHHHHH
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKI--------NSSGGQFKFMENINK 71 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki--------~~~~~~f~~~eNI~~ 71 (121)
+.+|+++. +++++||++++++++|+.++|+++||||||||+|+|.++|++| ++| +.++++|+++|||++
T Consensus 20 a~~y~~~~-~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~ 98 (190)
T 2rr8_A 20 AYEYLCHL-EEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQ 98 (190)
T ss_dssp HHHHHHHH-HHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHH
T ss_pred HHhhcHHH-HHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHH
Confidence 46789988 9999999999999998767899999999999999999999998 676 346778999999999
Q ss_pred HHHhhh----------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccCCC
Q psy17185 72 GLTFIA----------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPAAC 111 (121)
Q Consensus 72 FL~ac~----------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~~~ 111 (121)
||++|+ +++||||++|+ ||++|++++++++ .||++++.
T Consensus 99 FL~ac~~~Gvp~~~lFet~DL~e~kn~~~Vi~cL~aL~~~a~~~g--~~P~~~~~ 151 (190)
T 2rr8_A 99 WLNAMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLFKLG--LAPQIQDL 151 (190)
T ss_dssp HHHGGGGTTCCSTTCCCHHHHTCTTCCHHHHHHHHHHHHHHHHSS--CCCCCCCC
T ss_pred HHHHHHHcCCCccccCCHHHHHhcCCHHHHHHHHHHHHHHHHHCC--CCCCcccc
Confidence 999999 89999999998 9999999999876 38988764
No 8
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.97 E-value=7.2e-32 Score=202.98 Aligned_cols=107 Identities=25% Similarity=0.361 Sum_probs=96.7
Q ss_pred CcCCH-HHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCccccc-CCCCchhHHHHHHHHHHhhh---
Q psy17185 3 AKRNP-EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKIN-SSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 3 ~k~d~-~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~-~~~~~f~~~eNI~~FL~ac~--- 77 (121)
.+|+. +.++++++||++++++++++.++|+++||||||||+|+|.|+|++|++|+ .++++|+++|||+.||++|+
T Consensus 49 ~~ye~l~~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv~kI~~~s~~~f~~~eNI~~FL~ac~~~G 128 (203)
T 1p5s_A 49 QAYDYLCRVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIG 128 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTTSCCCCCCCSSSCCCHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCcccccCCCCCcchHHHHHHHHHHHHHHcC
Confidence 45666 68899999999999999997778999999999999999999999999995 56789999999999999999
Q ss_pred -------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccCCC
Q psy17185 78 -------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPAAC 111 (121)
Q Consensus 78 -------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~~~ 111 (121)
+++||||++|+ ||++|++++++.+ .||++.+.
T Consensus 129 vp~~~lF~t~DL~e~kn~~~Vi~~L~aL~~~a~~~g--~~p~l~~l 172 (203)
T 1p5s_A 129 LPEIFHFELTDIYEGKNLPKVIYCIHALSYFLSMQD--LAPPLIKS 172 (203)
T ss_dssp CCGGGCCCHHHHHSCSCHHHHHHHHHHHHHHHHHTT--SSCCCCCC
T ss_pred CCcccccCHHHHHhcCCHHHHHHHHHHHHHHHhhcC--CCCchhhh
Confidence 89999999998 9999999998865 37887754
No 9
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=186.01 Aligned_cols=98 Identities=22% Similarity=0.318 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHhCCCC-----CCcch-HHHHhhhHHHHHHHHHhhcCCCcccccC-CCCchhHHHHHHHHHHhhh-
Q psy17185 6 NPEQDKEAQAWIETVTGQKF-----PAGVL-YEDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINKGLTFIA- 77 (121)
Q Consensus 6 d~~~e~~~~~WIe~vl~~~~-----~~~~~-~~~~LrDGviLC~L~N~l~P~~v~ki~~-~~~~f~~~eNI~~FL~ac~- 77 (121)
..++|+++++||+++++.+. ++.++ |+++|||||+||+|+|.++|++|++|+. ++++|+++|||+.||++|+
T Consensus 4 ~~~~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~ki~~~~~~~f~~~eNI~~FL~a~~~ 83 (121)
T 1wyr_A 4 GSSGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCAT 83 (121)
T ss_dssp SCCSHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCCcCCCCCcchHHHHHHHHHHHHHHHH
Confidence 35689999999999977543 23334 6899999999999999999999999975 4568999999999999999
Q ss_pred ------hccceecCCCh-----hHHHHHHhhhcCCCC
Q psy17185 78 ------ITPQVFSNDSI-----TIHSGTGSHLTQPEW 103 (121)
Q Consensus 78 ------~~~DLfe~kn~-----~L~aL~~~a~~~~~~ 103 (121)
++.||||+||+ ||++|+++++++|.+
T Consensus 84 ~g~~~F~~~DL~e~kn~~~V~~cL~aL~~~~~~~p~~ 120 (121)
T 1wyr_A 84 LQVEIFDPDDLYSGVNFSKVLSTLLAVNKATESGPSS 120 (121)
T ss_dssp HTCCCCCHHHHHTCSCHHHHHHHHHHHHHHHSCCCCC
T ss_pred cCCCccCHHHHHcCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999 999999999998765
No 10
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=193.34 Aligned_cols=106 Identities=21% Similarity=0.332 Sum_probs=93.0
Q ss_pred CcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--cccc--------CCCCchhHHHHHHHH
Q psy17185 3 AKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKIN--------SSGGQFKFMENINKG 72 (121)
Q Consensus 3 ~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~--------~~~~~f~~~eNI~~F 72 (121)
.+|++..+ ++++||++++|+++|++++|.++||||||||+|+|+|+|++| ++|+ .++++|+++|||++|
T Consensus 43 ~eyl~~~~-e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~F 121 (193)
T 3i6x_A 43 YEYLCHLE-EAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQW 121 (193)
T ss_dssp HHHHHHHH-HHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHH
Confidence 46777666 999999999999999877899999999999999999999999 5784 457789999999999
Q ss_pred HHhhh----------hccceecCCCh-----hHHHHHHhhhcCCCCCCcccCCC
Q psy17185 73 LTFIA----------ITPQVFSNDSI-----TIHSGTGSHLTQPEWGREKPAAC 111 (121)
Q Consensus 73 L~ac~----------~~~DLfe~kn~-----~L~aL~~~a~~~~~~~gp~~~~~ 111 (121)
|++|+ +++||||++|+ ||++|++++++.+ + .|++...
T Consensus 122 L~ac~~~Gvp~~~lFet~DL~e~kn~~~V~~cL~aL~~~a~~~G-~-~P~i~~l 173 (193)
T 3i6x_A 122 LNAMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLFKLG-L-APQIQDL 173 (193)
T ss_dssp HHHHHHHTCCGGGCCCHHHHHSCSCHHHHHHHHHHHHHHHHHTT-S-SCCCCCC
T ss_pred HHHHHHcCCCcccCCCcHHHhcCCCHHHHHHHHHHHHHHHhhCC-C-CCCcccc
Confidence 99999 89999999998 9999999999863 3 3665543
No 11
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=99.96 E-value=3.2e-30 Score=181.35 Aligned_cols=95 Identities=16% Similarity=0.339 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHHhC-CC----CCCcchH-HHHhhhHHHHHHHHHhhcCCCcccccC-CCCchhHHHHHHHHHHhhh-
Q psy17185 6 NPEQDKEAQAWIETVTG-QK----FPAGVLY-EDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINKGLTFIA- 77 (121)
Q Consensus 6 d~~~e~~~~~WIe~vl~-~~----~~~~~~~-~~~LrDGviLC~L~N~l~P~~v~ki~~-~~~~f~~~eNI~~FL~ac~- 77 (121)
+++.++++++||+++++ +. +++.++| .++|||||+||+|+|.++|++|++|+. ++++|+++|||+.||++|+
T Consensus 10 ~~~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~kI~~~~~~~f~~~eNI~~FL~a~~~ 89 (126)
T 2l3g_A 10 HMNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGA 89 (126)
T ss_dssp CCCHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCccCCCCCcchHHHHHHHHHHHHHHH
Confidence 45688999999999966 32 3444566 699999999999999999999999975 5568999999999999999
Q ss_pred -------hccceecCCCh-----hHHHHHHhhhcC
Q psy17185 78 -------ITPQVFSNDSI-----TIHSGTGSHLTQ 100 (121)
Q Consensus 78 -------~~~DLfe~kn~-----~L~aL~~~a~~~ 100 (121)
+++||||+||+ ||++|++++++.
T Consensus 90 ~~g~~lF~t~DL~e~kn~~~V~~cL~aL~~~~~~~ 124 (126)
T 2l3g_A 90 SLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADI 124 (126)
T ss_dssp TSCCCCCCHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCccCHHHHHhCCCHHHHHHHHHHHHHHHHHc
Confidence 89999999999 999999999875
No 12
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.85 E-value=9.1e-22 Score=165.40 Aligned_cols=92 Identities=21% Similarity=0.327 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhCCCCC------C--cchHHHHhhhHHHHHHHHHhhcCCCc--ccccC-CC-CchhHHHHHHHHHH
Q psy17185 7 PEQDKEAQAWIETVTGQKFP------A--GVLYEDAIKDGQILCHLINKLKPGSV--AKINS-SG-GQFKFMENINKGLT 74 (121)
Q Consensus 7 ~~~e~~~~~WIe~vl~~~~~------~--~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~~-~~-~~f~~~eNI~~FL~ 74 (121)
.|..+++++||+++...+.. . .++|.++|||||+||+|+|+|+|++| ++|+. ++ .+|+++|||+.||+
T Consensus 4 ~~~w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~ 83 (587)
T 3ky9_A 4 KELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLS 83 (587)
T ss_dssp -CHHHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHH
Confidence 46789999999998654332 1 15799999999999999999999999 57874 33 36999999999999
Q ss_pred hh-h----------hccceecCCCh-----hHHHHHHhhh
Q psy17185 75 FI-A----------ITPQVFSNDSI-----TIHSGTGSHL 98 (121)
Q Consensus 75 ac-~----------~~~DLfe~kn~-----~L~aL~~~a~ 98 (121)
|| + +++||||++|+ ||++||+.+.
T Consensus 84 ~~~~~~g~~~~~~f~~~Dl~~~~~~~~V~~~l~~l~~~~~ 123 (587)
T 3ky9_A 84 TCCEKFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTPI 123 (587)
T ss_dssp HHHHTTCCCTTSSCCHHHHHTCSCHHHHHHHHHHHHHSTT
T ss_pred HHHHHcCCCHHHcCCchhhhccCCcchHHHHHHHHhhhhh
Confidence 99 5 99999999998 9999998543
No 13
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=7.9e-19 Score=122.91 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=81.4
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCCC--CcchHHHHhhhHHHHHHHHHhhcCCCcccccC-CCCchhHHHHHHHHHHhhh-
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKFP--AGVLYEDAIKDGQILCHLINKLKPGSVAKINS-SGGQFKFMENINKGLTFIA- 77 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~~--~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~-~~~~f~~~eNI~~FL~ac~- 77 (121)
+.++.+++++.+.+||++.|++... .-.+|++.|+||++||+|+|.|.|+++++++. +.++|+++|||+.||++++
T Consensus 12 ~~~~~~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~~~~~~p~~~~~~~eNv~~aL~~~~~ 91 (129)
T 2yrn_A 12 VIHGLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACLNFLAA 91 (129)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCTTCCSSCCSTTHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcccccCCCCcHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999886532 23479999999999999999999999999985 6789999999999999998
Q ss_pred --------hccceecCCCh----hHHHHHHhhh
Q psy17185 78 --------ITPQVFSNDSI----TIHSGTGSHL 98 (121)
Q Consensus 78 --------~~~DLfe~kn~----~L~aL~~~a~ 98 (121)
.+.|+++++-- .|.+|.++.+
T Consensus 92 ~gv~~~~i~~~DI~dgn~~~iL~Llw~L~r~~q 124 (129)
T 2yrn_A 92 KGINIQGLSAEEIRNGNLKAILGLFFSLSRYKQ 124 (129)
T ss_dssp HTCCCTTCCHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred hCCcccCCChhhhhcCCHhHHHHHHHHHHHHHh
Confidence 78899985432 6777777654
No 14
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.65 E-value=1e-16 Score=133.17 Aligned_cols=86 Identities=22% Similarity=0.286 Sum_probs=72.3
Q ss_pred CcCCHHHHHHHHHHHHHHhCCC------CCC---cchHHHHhhhHHHHHHHHHhhcCCCc--ccccCCC--CchhHHHHH
Q psy17185 3 AKRNPEQDKEAQAWIETVTGQK------FPA---GVLYEDAIKDGQILCHLINKLKPGSV--AKINSSG--GQFKFMENI 69 (121)
Q Consensus 3 ~k~d~~~e~~~~~WIe~vl~~~------~~~---~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~~~~--~~f~~~eNI 69 (121)
++++++++..+.+||+++|+++ +|- ..+|++.|+||++||+|+|.+.|++| ++++.++ ++|+++|||
T Consensus 2 ~~~~~~q~~~f~~WIN~~L~~~~~~~~~l~~~~~v~~l~~dL~DGv~L~~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi 81 (506)
T 1pxy_A 2 SPGIQSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENH 81 (506)
T ss_dssp -----CTHHHHHHHHHHHHTTCTTTTTTCSCCTTSSHHHHHSTTSHHHHHHHHHHSTTSSCGGGSCCCSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCccccccCCCCCchhHHHHHhcchHHHHHHHHHHcCCCCCccccCccccccHHHHHHHH
Confidence 6789999999999999999986 221 24799999999999999999999999 8888654 379999999
Q ss_pred HHHHHhhh---------hccceecCCCh
Q psy17185 70 NKGLTFIA---------ITPQVFSNDSI 88 (121)
Q Consensus 70 ~~FL~ac~---------~~~DLfe~kn~ 88 (121)
+.||++|+ ++.||||+++.
T Consensus 82 ~~~L~~~k~~g~~~~~i~~~Dl~dg~~~ 109 (506)
T 1pxy_A 82 TLCLNSAKAVGCSVVNIGTQDLAEGRPH 109 (506)
T ss_dssp HHHHHHHHHTTCCCTTCCHHHHHHTCHH
T ss_pred HHHHHHHHHhCCCcCCCCHHHHhcCChH
Confidence 99999998 88999999987
No 15
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.64 E-value=3.5e-16 Score=121.19 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=73.4
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCC--------CCC-cchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCC-CchhHHHH
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQK--------FPA-GVLYEDAIKDGQILCHLINKLKPGSVA--KINSSG-GQFKFMEN 68 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~--------~~~-~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~-~~f~~~eN 68 (121)
++.+|++++++.+++||+++++++ +++ ..+|++.|+||++||+|+|.+.|++|. +++.++ ..|+++||
T Consensus 17 ~~~~~~~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eN 96 (275)
T 1aoa_A 17 TQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQEN 96 (275)
T ss_dssp ----CCHHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHH
Confidence 467999999999999999999874 222 247999999999999999999999985 777654 57999999
Q ss_pred HHHHHHhhh---------hccceecCCCh
Q psy17185 69 INKGLTFIA---------ITPQVFSNDSI 88 (121)
Q Consensus 69 I~~FL~ac~---------~~~DLfe~kn~ 88 (121)
++.||++++ ++.||+|++.-
T Consensus 97 v~~aL~~~k~~g~~l~~I~~~DIvdg~~~ 125 (275)
T 1aoa_A 97 LNLALNSASAIGCHVVNIGAEDLRAGKPH 125 (275)
T ss_dssp HHHHHHHHHHTTCCCTTCCHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCcccCCCHHHHHcCcHH
Confidence 999999998 88899998865
No 16
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.62 E-value=9.1e-17 Score=123.58 Aligned_cols=86 Identities=19% Similarity=0.260 Sum_probs=75.1
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh----
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA---- 77 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~---- 77 (121)
+++|+..+++.+++||++++++.-+...+|++.|+||++||+|+|.|.|+.+++++.++++|+++|||+.||++++
T Consensus 21 ~~~~~~~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~~gv 100 (254)
T 1wku_A 21 DPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASKGV 100 (254)
T ss_dssp --CHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred hccchHHHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHHcCC
Confidence 4577888899999999999987655445799999999999999999999999888878889999999999999998
Q ss_pred -----hccceecCCC
Q psy17185 78 -----ITPQVFSNDS 87 (121)
Q Consensus 78 -----~~~DLfe~kn 87 (121)
++.|++|++-
T Consensus 101 ~lv~I~~~DIvdG~~ 115 (254)
T 1wku_A 101 KLVSIGAEEIVDGNL 115 (254)
T ss_dssp CCCSCCHHHHHHCCH
T ss_pred CccCCCHHHHhccch
Confidence 7889999864
No 17
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.55 E-value=7.7e-15 Score=122.18 Aligned_cols=87 Identities=24% Similarity=0.279 Sum_probs=73.4
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCC--------CCC-cchHHHHhhhHHHHHHHHHhhcCCCc--ccccC-----CCCchhH
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQK--------FPA-GVLYEDAIKDGQILCHLINKLKPGSV--AKINS-----SGGQFKF 65 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~--------~~~-~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~~-----~~~~f~~ 65 (121)
..+|++++++++.+||+++++++ +++ ..+|++.|+||++||+|+|.+.|++| ++++. +.+.|++
T Consensus 6 ~~~~~~~q~~~f~~WIN~~L~~~~~~~~~lpi~~~v~dl~~dL~DG~~L~~Lie~l~~~~i~~~~i~~~~~~~~~~~~~~ 85 (513)
T 1rt8_A 6 MHTINEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKC 85 (513)
T ss_dssp ---CCHHHHHHHHHHHHHHHTTCTTTGGGCSCCTTSTHHHHHTTTSHHHHHHHHHHSTTSSCGGGSCCCC---CCCHHHH
T ss_pred cCcccHHHHHHHHHHHHHhccCCccccccCCCCCchHHHHHHhhcHHHHHHHHHHHcCCCcchhhcCCccccCcccHHHH
Confidence 46899999999999999999976 222 24799999999999999999999998 57775 3678999
Q ss_pred HHHHHHHHHhhh----------hccceecCCCh
Q psy17185 66 MENINKGLTFIA----------ITPQVFSNDSI 88 (121)
Q Consensus 66 ~eNI~~FL~ac~----------~~~DLfe~kn~ 88 (121)
+||++.||++++ ++.||+|++..
T Consensus 86 ~eNi~~~L~~~k~~g~~~l~~i~~~DI~dg~~~ 118 (513)
T 1rt8_A 86 IENNNVVINSAKAMGGISITNIGAGDILEGREH 118 (513)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSCCHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCCccCCcCHHhhhcCCHH
Confidence 999999999998 67799998876
No 18
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.53 E-value=3.4e-15 Score=114.13 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=74.5
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc-ccccCC-CCchhHHHHHHHHHHhhh--
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-AKINSS-GGQFKFMENINKGLTFIA-- 77 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v-~ki~~~-~~~f~~~eNI~~FL~ac~-- 77 (121)
+++|+..+++.+++||+++++..-+...++++.|+||++||+|+|.+.|+.+ ++++.+ +++|+++||++.+|++++
T Consensus 14 ~~~~~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k~~ 93 (245)
T 2wa7_A 14 DAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRE 93 (245)
T ss_dssp -CGGGGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 4688899999999999999875433334689999999999999999999998 888764 678999999999999998
Q ss_pred -------hccceecCCCh
Q psy17185 78 -------ITPQVFSNDSI 88 (121)
Q Consensus 78 -------~~~DLfe~kn~ 88 (121)
++.|++|++--
T Consensus 94 g~~lv~I~~~DIvdG~~k 111 (245)
T 2wa7_A 94 SIKLVSIDSKAIVDGNLK 111 (245)
T ss_dssp TCCCCSCCHHHHHTTCHH
T ss_pred CCcccCCCHHHhhCCCHH
Confidence 78899999854
No 19
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=99.50 E-value=3.7e-14 Score=99.07 Aligned_cols=64 Identities=19% Similarity=0.381 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--ccc-CCCCchhHHHHHHHHHHhhh
Q psy17185 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~-~~~~~f~~~eNI~~FL~ac~ 77 (121)
..|+.+||+++++.+++.. +.|+||+++|+|+|.|.||+|+ ||+ .+++.|.+++|+..|.++++
T Consensus 7 r~ElL~WIN~~L~~~~~ki----E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~ 73 (123)
T 2qjz_A 7 RHDMLAWINESLQLNLTKI----EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFK 73 (123)
T ss_dssp HHHHHHHHHHHHTCCCCCG----GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCchH----HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 5789999999999999873 5799999999999999999997 999 88999999999999999998
No 20
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=2.5e-14 Score=103.81 Aligned_cols=70 Identities=14% Similarity=0.330 Sum_probs=64.4
Q ss_pred cCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--ccc-CCCCchhHHHHHHHHHHhhh
Q psy17185 4 KRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 4 k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~-~~~~~f~~~eNI~~FL~ac~ 77 (121)
+-+++.+.|+.+||+++|+.+++.. +.|+||+++|+|+|.|.||+|+ ||+ .+++.|.+++|+..|.++++
T Consensus 18 ~~~~~sr~ElL~WIN~~L~~~~~ki----E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~ 90 (159)
T 1wyo_A 18 TSENLSRHDMLAWVNDSLHLNYTKI----EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFK 90 (159)
T ss_dssp CCCCCCHHHHHHHHHHHSCCCCSSG----GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHCCCCchh----hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHH
Confidence 4567788999999999999999863 5799999999999999999997 998 88999999999999999998
No 21
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.43 E-value=4.4e-14 Score=107.88 Aligned_cols=86 Identities=16% Similarity=0.221 Sum_probs=73.6
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCCC-CCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQKF-PAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~~-~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--- 77 (121)
+++++..+++.+.+||+++++... +...+|++.|+||++||+|+|.|.|+.+++.+ +++.|+++||++.+|++++
T Consensus 10 ~~e~~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~-~~~~~~~~eNv~~aL~~~k~~g 88 (246)
T 1dxx_A 10 SYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEK-GSTRVHALNNVNKALRVLQNNN 88 (246)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCC-CSSHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCC-CccHHHHHHHHHHHHHHHHHcC
Confidence 578889999999999999998653 33447899999999999999999999887653 5678999999999999998
Q ss_pred ------hccceecCCCh
Q psy17185 78 ------ITPQVFSNDSI 88 (121)
Q Consensus 78 ------~~~DLfe~kn~ 88 (121)
++.|+++++--
T Consensus 89 ~~l~~I~~~DIvdg~~~ 105 (246)
T 1dxx_A 89 VDLVNIGSTDIVDGNHK 105 (246)
T ss_dssp CCCTTCCHHHHHTTCHH
T ss_pred CccccCCHHHhhcccHH
Confidence 78899998754
No 22
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.42 E-value=6.5e-14 Score=106.72 Aligned_cols=86 Identities=15% Similarity=0.237 Sum_probs=72.2
Q ss_pred CCcCCHHHHHHHHHHHHHHhCCC----CC-CcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhh
Q psy17185 2 AAKRNPEQDKEAQAWIETVTGQK----FP-AGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFI 76 (121)
Q Consensus 2 ~~k~d~~~e~~~~~WIe~vl~~~----~~-~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac 76 (121)
+.+++..+++.+.+||++.++++ ++ ...+|++.|+||++||+|+|.+.|+.+++. .+++.|+++||++.+|+++
T Consensus 6 ~~e~~~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~-~~~~~~~~~eNv~~aL~~~ 84 (245)
T 1sh5_A 6 FDERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE-KGRMRFHKLQNVQIALDYL 84 (245)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-CCCSHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCC-CCcchHHHHHhHHHHHHHH
Confidence 35667788899999999999884 32 234699999999999999999999999764 4567899999999999999
Q ss_pred h---------hccceecCCCh
Q psy17185 77 A---------ITPQVFSNDSI 88 (121)
Q Consensus 77 ~---------~~~DLfe~kn~ 88 (121)
+ ++.|+++++--
T Consensus 85 k~~g~~l~~I~~~DIvdg~~k 105 (245)
T 1sh5_A 85 RHRQVKLVNIRNDDIADGNPK 105 (245)
T ss_dssp HHTTCCCCSCCHHHHHTTCHH
T ss_pred HHcCCcccCCChHhhhcccHH
Confidence 8 77899998754
No 23
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.40 E-value=8.2e-14 Score=109.64 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=71.5
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--- 77 (121)
++++++...++.+.+||++.+...-+.-.+|++.|+||++||+|++.|.|+.+++. .+++.|+++||++.+|++++
T Consensus 66 ~~~e~~~vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~-~~~~r~~kleNvn~aL~~lk~~g 144 (296)
T 3f7p_A 66 IADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE-KGRMRFHKLQNVQIALDYLRHRQ 144 (296)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-CCSSHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCccccc-CCcChhhhhhhHHHHHHHHHHhC
Confidence 34567777899999999999876444334789999999999999999999999773 46788999999999999998
Q ss_pred ------hccceecCCC
Q psy17185 78 ------ITPQVFSNDS 87 (121)
Q Consensus 78 ------~~~DLfe~kn 87 (121)
.+.|+++++-
T Consensus 145 v~lv~I~~~DIvdGn~ 160 (296)
T 3f7p_A 145 VKLVNIRNDDIADGNP 160 (296)
T ss_dssp CCCTTCCHHHHHTTCH
T ss_pred ccccCCChhhhhccch
Confidence 6678888854
No 24
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.27 E-value=1.4e-12 Score=112.67 Aligned_cols=88 Identities=20% Similarity=0.249 Sum_probs=76.6
Q ss_pred CCCcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---
Q psy17185 1 IAAKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 1 ~~~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--- 77 (121)
|.+++++.++..+.+||+++|+...+.-.+|++.|+||++||+|+|.|.|+.+++++.+++.|++++|++.+|++++
T Consensus 1 ~~~~~~~~q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~~g 80 (863)
T 1sjj_A 1 LDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKG 80 (863)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999875444444689999999999999999999999888888889999999999999998
Q ss_pred ------hccceecCCCh
Q psy17185 78 ------ITPQVFSNDSI 88 (121)
Q Consensus 78 ------~~~DLfe~kn~ 88 (121)
.+.|+++++--
T Consensus 81 ~~~~~i~~~di~~g~~~ 97 (863)
T 1sjj_A 81 VKLVSIGAEEIVDGNVK 97 (863)
T ss_dssp CCCTTCCSHHHHTTCHH
T ss_pred CccCCCChHHhhcCCHH
Confidence 66788888644
No 25
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.19 E-value=2.9e-11 Score=100.59 Aligned_cols=78 Identities=19% Similarity=0.309 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--ccccCC------CCchhHHHHHHHHHHhhh---
Q psy17185 9 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKINSS------GGQFKFMENINKGLTFIA--- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~~~------~~~f~~~eNI~~FL~ac~--- 77 (121)
++..+++||+++ +.+.. -.+|++.|+||++||+|++++.||.+ ++++.+ .+.|+++||++.+|++++
T Consensus 286 q~k~f~~WiN~~-~~~~~-v~~l~~DL~DG~~L~~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~al~~~~~~g 363 (513)
T 1rt8_A 286 EARVFTLWLNSL-DVTPS-IHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDLGKNQG 363 (513)
T ss_dssp HHHHHHHHHHHT-TCSSC-CSCHHHHTTTSHHHHHHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc-CCCCC-ccCHHHHHhhHHHHHHHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHHHHHHHHHcC
Confidence 456788999998 33322 23799999999999999999999987 777753 467999999999999998
Q ss_pred ------hccceecCCCh
Q psy17185 78 ------ITPQVFSNDSI 88 (121)
Q Consensus 78 ------~~~DLfe~kn~ 88 (121)
++.|+++++--
T Consensus 364 v~lv~i~~~DIvdg~~~ 380 (513)
T 1rt8_A 364 FSLVGIQGADITDGSRT 380 (513)
T ss_dssp CCCTTCCHHHHHTTCHH
T ss_pred ceeeccchhhhhcCCch
Confidence 78899998743
No 26
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.10 E-value=3.6e-11 Score=93.49 Aligned_cols=82 Identities=16% Similarity=0.145 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc-ccccC-CCCchhHHHHHHHHHHhhh-------
Q psy17185 7 PEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-AKINS-SGGQFKFMENINKGLTFIA------- 77 (121)
Q Consensus 7 ~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v-~ki~~-~~~~f~~~eNI~~FL~ac~------- 77 (121)
...++.+.+||++.|...-+.-.++++.|+||++||+|++.|.|+.+ ++++. +.+.|+++||++.+|++++
T Consensus 46 ~vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~lk~~gv~lv 125 (272)
T 3hoc_A 46 KIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLV 125 (272)
T ss_dssp GHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHHHHcCCccc
Confidence 34456789999998764322234699999999999999999999998 78875 4678999999999999998
Q ss_pred --hccceecCCCh
Q psy17185 78 --ITPQVFSNDSI 88 (121)
Q Consensus 78 --~~~DLfe~kn~ 88 (121)
.+.|+.+++--
T Consensus 126 nI~~~DIvdGn~k 138 (272)
T 3hoc_A 126 SIDSKAIVDGNLK 138 (272)
T ss_dssp SCCHHHHHTTCHH
T ss_pred ccccchhhcCCHH
Confidence 66788888644
No 27
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.04 E-value=1.4e-10 Score=81.30 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--ccc-CCCCchhHHHHHHHHHHhhh---------
Q psy17185 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KIN-SSGGQFKFMENINKGLTFIA--------- 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~-~~~~~f~~~eNI~~FL~ac~--------- 77 (121)
++.+..||++.|.+.-..-.+++..|+||++||+|++.+.|..++ +++ .+.+.|+.+||++..|++++
T Consensus 24 ~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~~gi~l~~I 103 (131)
T 2vzc_A 24 KKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKP 103 (131)
T ss_dssp HHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred HHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHHcCCCcCCC
Confidence 456889999987643223346999999999999999999998773 665 35678999999999999998
Q ss_pred hccceecCCCh
Q psy17185 78 ITPQVFSNDSI 88 (121)
Q Consensus 78 ~~~DLfe~kn~ 88 (121)
.+.|+.+++--
T Consensus 104 ~~~DIvdGn~k 114 (131)
T 2vzc_A 104 RPEDIVNCDLK 114 (131)
T ss_dssp CHHHHHTTCHH
T ss_pred CHHHhhCCCHH
Confidence 77788888754
No 28
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=98.93 E-value=1.1e-09 Score=90.99 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--ccccCC--CCchhHHHHHHHHHHhhh------
Q psy17185 8 EQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKINSS--GGQFKFMENINKGLTFIA------ 77 (121)
Q Consensus 8 ~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~~~--~~~f~~~eNI~~FL~ac~------ 77 (121)
.+++.+++||++.+... .-.+|++.|+||++||+|++.+.|+.+ ++++.+ ++.|+++||++.+|++++
T Consensus 276 ~q~ktf~~WiN~~~~~~--~v~dl~~Dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~~k~~~v~l 353 (506)
T 1pxy_A 276 RDERCYRLWINSLGIDS--YVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKIGKQLKFSL 353 (506)
T ss_dssp HHHHHHHHHHTTTTCSS--CCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCC--CcccHHHHHHhHHHHHHHHHHHcCCccccccccCCccccHHHHHHHHHHHHHHHHHcCCcc
Confidence 45677899999985321 223699999999999999999999987 566654 578999999999999887
Q ss_pred ---hccceecCCCh
Q psy17185 78 ---ITPQVFSNDSI 88 (121)
Q Consensus 78 ---~~~DLfe~kn~ 88 (121)
.+.|+++++.-
T Consensus 354 ~~I~~~dIvdg~~k 367 (506)
T 1pxy_A 354 VNVAGNDIVQGNKK 367 (506)
T ss_dssp CSCCHHHHHTTCHH
T ss_pred cCCCHHHHhcCCHH
Confidence 77788887653
No 29
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=98.78 E-value=3e-09 Score=84.94 Aligned_cols=79 Identities=14% Similarity=0.134 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcc-ccc-CCCCchhHHHHHHHHHHhhh---------h
Q psy17185 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA-KIN-SSGGQFKFMENINKGLTFIA---------I 78 (121)
Q Consensus 10 e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~-ki~-~~~~~f~~~eNI~~FL~ac~---------~ 78 (121)
++.+.+||++.|..--+.-.++++.|+||++||+|++.|.+..+. +++ .+++.++++||++..|++++ .
T Consensus 19 ~ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~g~~lv~i~ 98 (347)
T 4b7l_A 19 QNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVSID 98 (347)
T ss_dssp HHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred HHHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 456789999987642222346999999999999999999998873 444 46778999999999999998 7
Q ss_pred ccceecCCCh
Q psy17185 79 TPQVFSNDSI 88 (121)
Q Consensus 79 ~~DLfe~kn~ 88 (121)
+.|+.+++--
T Consensus 99 ~~DIvdGn~~ 108 (347)
T 4b7l_A 99 SKAIVDGNLK 108 (347)
T ss_dssp HHHHHTTCHH
T ss_pred cchhhcCCHh
Confidence 7788888754
No 30
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.25 E-value=7.7e-07 Score=61.92 Aligned_cols=79 Identities=11% Similarity=0.246 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhCCCC--CCcchHH-HHhhhHHHHHHHHHhhcCCCcc--cccCCC-CchhHHHHHHHHHHhhh-----
Q psy17185 9 QDKEAQAWIETVTGQKF--PAGVLYE-DAIKDGQILCHLINKLKPGSVA--KINSSG-GQFKFMENINKGLTFIA----- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~--~~~~~~~-~~LrDGviLC~L~N~l~P~~v~--ki~~~~-~~f~~~eNI~~FL~ac~----- 77 (121)
.++++.+|.+.-+...- ..-.+|. ..++||+.+|.|++.++|+.|. -+.... ......+|.+..+..++
T Consensus 8 ~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~~ 87 (124)
T 1wjo_A 8 NDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGAR 87 (124)
T ss_dssp CCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 46789999998665211 1123688 8999999999999999999983 233334 56788999999999998
Q ss_pred ---hccceecCCC
Q psy17185 78 ---ITPQVFSNDS 87 (121)
Q Consensus 78 ---~~~DLfe~kn 87 (121)
.+.|+.|++.
T Consensus 88 ~~l~pEDIve~~p 100 (124)
T 1wjo_A 88 VYALPEDLVEVKP 100 (124)
T ss_dssp CCCCHHHHHHTCT
T ss_pred cccCHHHHhcCcc
Confidence 7778888753
No 31
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=97.72 E-value=7.8e-05 Score=57.81 Aligned_cols=61 Identities=18% Similarity=0.419 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--cccc-CCCCchhHHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKIN-SSGGQFKFMENINKGLT 74 (121)
Q Consensus 10 e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~-~~~~~f~~~eNI~~FL~ 74 (121)
..++..||++.|+.++.. .+.|.+|.+.|+|++.|.||+| +||+ .++..+..+.|...+-+
T Consensus 17 R~elL~WiN~~L~~~~~k----iEel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~ 80 (268)
T 2r8u_A 17 RHDMLAWINESLQLNLTK----IEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQA 80 (268)
T ss_dssp HHHHHHHHHHHHTCCCCC----GGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcch----HHHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHH
Confidence 578999999999999976 4679999999999999999998 4665 35566666666544333
No 32
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=97.62 E-value=4.2e-05 Score=53.09 Aligned_cols=66 Identities=12% Similarity=0.181 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+..|.+..+.. .+. -.+|-...+||.++|.|++.++|+.|.. .. -..-...+|++.-++.++
T Consensus 8 ~k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~af~aLih~~~P~lid~-~~-l~~~~~~~n~~~af~~Ae 75 (128)
T 2d87_A 8 IKQMLLDWCRAKTRGYEHVD-IQNFSSSWSDGMAFCALVHNFFPEAFDY-GQ-LSPQNRRQNFEVAFSSAE 75 (128)
T ss_dssp HHHHHHHHHHHHSSSCTTCC-CSCTTTTTTSSHHHHHHHHHHCTTTSCS-TT-SCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCccccccccHHHHHHHHHHCcCcCCH-HH-cCccCHHHHHHHHHHHHH
Confidence 467889999998863 111 2368889999999999999999998721 11 112346899999888887
No 33
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=97.51 E-value=0.00023 Score=50.61 Aligned_cols=64 Identities=16% Similarity=0.344 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--cccc-CCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKIN-SSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~-~~~~~f~~~eNI~~FL~ac~ 77 (121)
-..++..||+++|..++.. .+.|.+|.+.|+|++.|. |+| +|++ .++..+....|....-++-+
T Consensus 7 SR~eLL~WiN~~L~~n~tk----IE~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~ 73 (145)
T 4abo_I 7 SRQELLAWINQVTSLGLTR----IEDCGKGYAMIQIFDSIY-QDIPLKKVNFECNNEYQYINNWKVLQQVFL 73 (145)
T ss_dssp CHHHHHHHHHHHHTCCCCS----GGGGGGSHHHHHHHHHHH-CCSCTTTSCSSCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCcch----HHHccccHHHHHHHHHHh-cCcchhhcccCCCCHHHHHHHHHHHHHHHH
Confidence 3578999999999999976 467999999999999999 666 5665 56777888888876665555
No 34
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.42 E-value=0.00035 Score=47.70 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhCCC-CCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh--------
Q psy17185 9 QDKEAQAWIETVTGQK-FPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA-------- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~-~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~-------- 77 (121)
.++.+..|.+..+..- -..-.+|-...+||.++|.|++.++|+.|. .+.. -...+|...-++.++
T Consensus 10 ~~~~LL~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~----~~~~~n~~~af~~a~~LGi~~ll 85 (119)
T 2d89_A 10 ASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNP----QDIKENNKKAYDGFASIGISRLL 85 (119)
T ss_dssp CHHHHHHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCT----TCSHHHHHHHHHHHHHHTCCCCS
T ss_pred HHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcc----cCHHHHHHHHHHHHHHhCCCccc
Confidence 4678999999988531 011236888999999999999999999873 2222 135778887777666
Q ss_pred hccceecC
Q psy17185 78 ITPQVFSN 85 (121)
Q Consensus 78 ~~~DLfe~ 85 (121)
.+.|+.+.
T Consensus 86 ~peDi~~~ 93 (119)
T 2d89_A 86 EPSDMVLL 93 (119)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhcc
Confidence 55566544
No 35
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00096 Score=46.41 Aligned_cols=64 Identities=9% Similarity=0.354 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc--cccc-CCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV--AKIN-SSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v--~ki~-~~~~~f~~~eNI~~FL~ac~ 77 (121)
-..|+..||++.+..++.. .+.|.+|.+.|++++.+.| .| .+++ .+++.+..+.|....-++-.
T Consensus 11 sR~elL~WiN~~L~~n~~k----iEel~tGaayCQl~d~l~g-~v~l~kVkf~a~~e~e~~~N~k~LQ~~f~ 77 (127)
T 2qjx_A 11 SRTELLTWLNGLLNLNYKK----IEECGTGAAYCQIMDSIYG-DLPMNRVKFNATAEYEFQTNYKILQSCFS 77 (127)
T ss_dssp CHHHHHHHHHHHHTCCCCS----GGGGGGSHHHHHHHHHHHC-CSCGGGSCTTCCSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCccH----HHHccchHHHHHHHhhhcc-ccCccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 3578999999999999976 4567999999999999995 45 4555 46677788888877666665
No 36
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=97.06 E-value=0.0012 Score=52.51 Aligned_cols=102 Identities=17% Similarity=0.237 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---------h
Q psy17185 9 QDKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA---------I 78 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~---------~ 78 (121)
.++.+..|.+..+.. .+ .+|-.+.+||.++|.|++.++|+.+.....- ..-..++|...-++.++ .
T Consensus 141 ~k~~LL~W~~~~~~~~~v---~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l-~~~~~~~n~~~Af~~Ae~~lGip~ll~ 216 (347)
T 4b7l_A 141 PKQRLLGWIQNKIPYLPI---TNFNQNWQDGKALGALVDSCAPGLCPDWESW-DPQKPVDNAREAMQQADDWLGVPQVIT 216 (347)
T ss_dssp HHHHHHHHHHHHCTTSCC---CCSSGGGTTSHHHHHHHHHHSTTSSTTGGGS-CTTCHHHHHHHHHHHHHHHHCCCCSSC
T ss_pred HHHHHHHHHHhhCCCccc---CCCCCCccchHHHHHHHHHhCCccccchhhc-CcCCHHHHHHHHHHHHHHhcCCCcccC
Confidence 467899999986532 22 2578899999999999999999988544321 11246789998888776 4
Q ss_pred ccceecCCC-h-hHHHH-HHhhhcCCCCCCcccCCCCCCCCCCC
Q psy17185 79 TPQVFSNDS-I-TIHSG-TGSHLTQPEWGREKPAACDCPDGHPS 119 (121)
Q Consensus 79 ~~DLfe~kn-~-~L~aL-~~~a~~~~~~~gp~~~~~~~~~~~~~ 119 (121)
+.|+.+.+- - +++.. |.+-+. .++++.+-+++.+|+
T Consensus 217 peDi~~~~pDeksimtYvs~~~~~-----~~~~~~~l~~k~~ps 255 (347)
T 4b7l_A 217 PEEIIHPDVDEHSVMTYLSQFPKA-----KLKPGAPLKPKLNPK 255 (347)
T ss_dssp HHHHTCTTCCHHHHHHHHTTGGGC-----CCCTTCCCCCSCCGG
T ss_pred HHHcCCCCCChhHHHHHHHHHhhh-----ccCcccccccccccc
Confidence 556654331 1 44322 222221 234455666666664
No 37
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=97.00 E-value=0.00093 Score=45.72 Aligned_cols=65 Identities=15% Similarity=0.249 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 10 DKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
++.+..|.+..+.. .+. -.+|-...+||.++|.|++.++|+.|. ... -..-...+|+..-++.++
T Consensus 11 ~~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid-~~~-l~~~~~~~n~~~af~~Ae 77 (121)
T 2d88_A 11 SSKLLGWCQRQTDGYAGVN-VTDLTMSWKSGLALCAIIHRYRPDLID-FDS-LDEQNVEKNNQLAFDIAE 77 (121)
T ss_dssp SCHHHHHHHHHSTTSSSCC-CCCSSHHHHTSHHHHHHHHHHCTTTSC-TTT-SCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCC-CCCchhhccccHHHHHHHHHhCcCcCC-HHH-cCccCHHHHHHHHHHHHH
Confidence 56789999998853 111 236889999999999999999999872 111 111246899998888876
No 38
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=96.98 E-value=0.00092 Score=46.15 Aligned_cols=63 Identities=11% Similarity=0.248 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh
Q psy17185 10 DKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
++.+..|.+..+.. .+. -.+|-...+||..+|.|++.++|+.|. .+.. -...+|++.-++.++
T Consensus 9 k~~LL~W~q~~~~~y~~v~-V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~----~~~~~n~~~af~~Ae 75 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYPNVN-VHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKK----CNAHYNLQNAFNLAE 75 (127)
T ss_dssp THHHHHHHHHHHHTSSSCC-CSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCS----SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCC-CCCCcccccccHHHHHHHHHHCcCcCCHHHhCc----CCHHHHHHHHHHHHH
Confidence 57789999987642 111 235888999999999999999999873 2222 235788888888776
No 39
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=96.88 E-value=0.0024 Score=43.28 Aligned_cols=65 Identities=20% Similarity=0.323 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhC----CCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 8 EQDKEAQAWIETVTG----QKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 8 ~~e~~~~~WIe~vl~----~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
..++.+..|.+..+. ..+. +|-.+.+||.++|.|++.++|+.|.. .. -..-...+|++.-++.++
T Consensus 7 ~~~~~LL~W~q~~~~~y~~v~v~---nFs~sw~dG~af~aLih~~~P~lid~-~~-l~~~~~~~n~~~af~~Ae 75 (116)
T 1wyl_A 7 GTQEELLRWCQEQTAGYPGVHVS---DLSSSWADGLALCALVYRLQPGLLEP-SE-LQGLGALEATAWALKVAE 75 (116)
T ss_dssp SSHHHHHHHHHHHHHHSTTCCCS---CTTTTTTSSHHHHHHHHHHCTTSCCC-SS-GGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCCCCCCC---CccccccccHHHHHHHHHHCcCCCCH-HH-hccCCHHHHHHHHHHHHH
Confidence 457889999999864 2332 58889999999999999999998731 11 112246889998888886
No 40
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=96.76 E-value=0.001 Score=50.17 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhCCC-CCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh--------
Q psy17185 9 QDKEAQAWIETVTGQK-FPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA-------- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~-~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~-------- 77 (121)
.++.+.+|.+..+..- -..-.+|-..++||+++|.|++.++|+.+. .+.... ...+|.+..++.++
T Consensus 136 ~~~~LL~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~---~~~~n~~~a~~~A~~~lGi~~~ 212 (246)
T 1dxx_A 136 SEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQ---SATQRLEHAFNIARYQLGIEKL 212 (246)
T ss_dssp HHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCC---CHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHhccCCCCCcCCCcccchhHHHHHHHHHHHCcCccchhhhcccC---CHHHHHHHHHHHHHHhCCCCcc
Confidence 3567899999887631 011236888999999999999999999873 221111 35788888888775
Q ss_pred -hccceecCCC--h-hHHHHHHhhhcCCC
Q psy17185 78 -ITPQVFSNDS--I-TIHSGTGSHLTQPE 102 (121)
Q Consensus 78 -~~~DLfe~kn--~-~L~aL~~~a~~~~~ 102 (121)
.+.|+.+++. - .+.-|+.+.+.+|.
T Consensus 213 l~peDi~~~~pD~k~i~tyva~l~~~~~~ 241 (246)
T 1dxx_A 213 LDPEDVDTTYPDKKSILMYITSLFQVLPQ 241 (246)
T ss_dssp CCHHHHSSSSCCHHHHHHHHHHHHTTSCC
T ss_pred CCHHHhhcCCCcHHHHHHHHHHHHHHccC
Confidence 5566655543 1 44444555555554
No 41
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=96.73 E-value=0.0017 Score=49.34 Aligned_cols=75 Identities=16% Similarity=0.272 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh---------
Q psy17185 9 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA--------- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~--------- 77 (121)
.++.+..|++..+.. .++ -.+|-.+++||.++|.|++.++|+.+..-.- ..-...+|....++.++
T Consensus 141 ~~~~LL~W~~~~~~~y~~v~-v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l--~~~~~~~n~~~a~~~A~~~lGi~~~l 217 (254)
T 1wku_A 141 AKEGLLLWCQRKTAPYRNVN-VQNFHTSWKDGLALCALIHRHRPDLIDYAKL--RKDDPIGNLNTAFEVAEKYLDIPKML 217 (254)
T ss_dssp HHHHHHHHHHHHHTTCTTCC-CCSSSGGGTTSHHHHHHHHHHCTTSCCGGGC--CTTCHHHHHHHHHHHHHHHSCCCCCS
T ss_pred HHHHHHHHHHHHccCCCCCc-CCCCccchhhHHHHHHHHHHHCCCccccccc--CcCCHHHHHHHHHHHHHHHcCCCCcC
Confidence 456799999987742 121 2358889999999999999999998832111 11246789999888886
Q ss_pred hccceecCC
Q psy17185 78 ITPQVFSND 86 (121)
Q Consensus 78 ~~~DLfe~k 86 (121)
.+.|+.++.
T Consensus 218 ~peDiv~~~ 226 (254)
T 1wku_A 218 DAEDIVNTP 226 (254)
T ss_dssp CHHHHHHSS
T ss_pred CHHHHhccC
Confidence 566666654
No 42
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=96.58 E-value=0.0044 Score=41.51 Aligned_cols=66 Identities=15% Similarity=0.243 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCCC--CcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQKFP--AGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~--~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+..|.+..+.. .+ .-.+|-.+.+||.++|.|++.++|+.|.--.- ..-...+|++.-++.++
T Consensus 4 ~k~~LL~W~q~~~~~-y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l--~~~~~~~n~~~af~~Ae 71 (109)
T 1bkr_A 4 AKDALLLWCQMKTAG-YPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKL--KKSNAHYNLQNAFNLAE 71 (109)
T ss_dssp HHHHHHHHHHHHTTT-CTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGC--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc-CCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHc--CcCCHHHHHHHHHHHHH
Confidence 467889999998753 21 12368889999999999999999998731111 11246789988888775
No 43
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=96.52 E-value=0.0012 Score=44.92 Aligned_cols=64 Identities=14% Similarity=0.307 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+..|.+..+.. .+. -.+|-.+.+||.++|.|++.++|+.+. .+.. -...+|++.-++.++
T Consensus 9 ~~~~LL~W~q~~~~~y~~v~-v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~----~~~~~n~~~af~~Ae 76 (118)
T 1bhd_A 9 SEKILLSWVRQTTRPYSQVN-VLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVK----MSPIERLEHAFSKAQ 76 (118)
T ss_dssp HHHHHHHHHHHHHTTSTTCC-CCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHH----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCC-CCCCcccccCcHHHHHHHHHHCcCcCCHHHhCc----CCHHHHHHHHHHHHH
Confidence 467889999998852 111 235888999999999999999999873 2211 135788888887775
No 44
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=96.52 E-value=0.0035 Score=47.12 Aligned_cols=89 Identities=12% Similarity=0.188 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhCC--CCCCcchHHHHhhhHHHHHHHHHhhcCCCccc--ccCCCCchhHHHHHHHHHHhhh-------
Q psy17185 9 QDKEAQAWIETVTGQ--KFPAGVLYEDAIKDGQILCHLINKLKPGSVAK--INSSGGQFKFMENINKGLTFIA------- 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~--~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~k--i~~~~~~f~~~eNI~~FL~ac~------- 77 (121)
.++.+..|++..+.. .+ .-.+|-.+++||.++|.|++.++|+.+.. +.. -...+|....++.++
T Consensus 134 ~~~~LL~W~~~~~~~~~~~-~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~----~~~~~n~~~a~~~a~~~lGi~~ 208 (245)
T 1sh5_A 134 AKEKLLLWSQRMVEGYQGL-RCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYR----QTNLENLDQAFSVAERDLGVTR 208 (245)
T ss_dssp HHHHHHHHHHHHTTTSTTC-CCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHH----SCHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhccCCCc-ccCCccccccchHHHHHHHHHHCCCCCCHHHccc----CCHHHHHHHHHHHHHHhCCCCc
Confidence 456789999998764 11 12357788999999999999999998742 221 136789998888886
Q ss_pred --hccceecCC-Ch--hHHHHHHhhhcCCC
Q psy17185 78 --ITPQVFSND-SI--TIHSGTGSHLTQPE 102 (121)
Q Consensus 78 --~~~DLfe~k-n~--~L~aL~~~a~~~~~ 102 (121)
.+.|+.+.+ |- .+.=++.+-+.+|.
T Consensus 209 ~l~peDi~~~~pd~k~i~tyva~l~~~~~~ 238 (245)
T 1sh5_A 209 LLDPEDVDVPQPDEKSIITYVSSLYDAMPR 238 (245)
T ss_dssp CCCHHHHSSSSCCHHHHHHHHHHHHHHCC-
T ss_pred cCCHHHhccCCCcHHHHHHHHHHHHHHcCC
Confidence 556665443 22 33333444445543
No 45
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=96.32 E-value=0.0052 Score=46.30 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+.+|.+..+.. +. -.+|-..++||+++|.|++.++|+.+.....- ..-...+|....++.++
T Consensus 144 ~~~~LL~W~~~~~~~-~~-v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l-~~~~~~~n~~~a~~~A~ 209 (245)
T 2wa7_A 144 PKQRLLGWIQNKIPY-LP-ITNFNQNWQDGKALGALVDSCAPGLCPDWESW-DPQKPVDNAREAVQQAD 209 (245)
T ss_dssp HHHHHHHHHHHHSTT-SC-CCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGS-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CC-CCCCcccchhhHHHHHHHHHHCcccccccccc-CcccHHHHHHHHHHHHH
Confidence 467899999997642 21 12577889999999999999999988543321 12246889998888887
No 46
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=96.24 E-value=0.0024 Score=48.87 Aligned_cols=76 Identities=18% Similarity=0.216 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHHhhcCCCcc------cccCC-CCchhHHHHHHHHHHhhh----
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLINKLKPGSVA------KINSS-GGQFKFMENINKGLTFIA---- 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~------ki~~~-~~~f~~~eNI~~FL~ac~---- 77 (121)
++.+.+|.+..+.. ....-.+|-..++||+++|.|++.++|+.++ .+... ...-...+|....++.++
T Consensus 170 ~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~lGi 249 (275)
T 1aoa_A 170 EELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGC 249 (275)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHHHcCC
Confidence 66789999986632 1111235778899999999999999999653 22222 222357899999999887
Q ss_pred ----hccceecC
Q psy17185 78 ----ITPQVFSN 85 (121)
Q Consensus 78 ----~~~DLfe~ 85 (121)
.+.|+.++
T Consensus 250 ~~~l~peDi~~~ 261 (275)
T 1aoa_A 250 RQFVTPADVVSG 261 (275)
T ss_dssp CCSCCHHHHHTT
T ss_pred CCcCCHHHcCCC
Confidence 55555554
No 47
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=95.94 E-value=0.0091 Score=46.58 Aligned_cols=65 Identities=14% Similarity=0.282 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCC-CCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTGQK-FPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~~~-~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+..|.+..+..- --.-.+|-...+||+++|.|++.++|+.|. .+... ...+|+...+..++
T Consensus 190 ~k~~LL~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~----~~~~N~~~Af~~Ae 257 (296)
T 3f7p_A 190 AKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQ----TNLENLDQAFSVAE 257 (296)
T ss_dssp HHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTS----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHHCcCccCHHHcCcc----cHHHHHHHHHHHHH
Confidence 4567899999887531 011135778999999999999999999873 22221 36789999999884
No 48
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=95.91 E-value=0.01 Score=45.73 Aligned_cols=65 Identities=15% Similarity=0.241 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhC-CCCCCcchHHHHhhhHHHHHHHHHhhcCCCcccccCCCCchhHHHHHHHHHHhhh
Q psy17185 9 QDKEAQAWIETVTG-QKFPAGVLYEDAIKDGQILCHLINKLKPGSVAKINSSGGQFKFMENINKGLTFIA 77 (121)
Q Consensus 9 ~e~~~~~WIe~vl~-~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~ki~~~~~~f~~~eNI~~FL~ac~ 77 (121)
.++.+..|.+..+. ..+ .+|-...+||+++|.|++.++|+.+.....- ..-...+|....++.++
T Consensus 171 ~k~~LL~W~n~~~~~~~I---~nFs~sw~DG~af~aLi~~~~P~li~d~~~l-~~~~~~~n~~~Af~~Ae 236 (272)
T 3hoc_A 171 PKQRLLGWIQNKLPQLPI---TNFSRDWQSGRALGALVDSCAPGLCPDWDSW-DASKPVTNAREAMQQAD 236 (272)
T ss_dssp HHHHHHHHHHHHCTTSCC---CCSSGGGTTSHHHHHHHHHHSTTSSTTGGGS-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCC---CChhhcccchHHHHHHHHHhCcccccchhhc-CccCHHHHHHHHHHHHH
Confidence 46789999998653 222 2577889999999999999999988544321 12347899999999887
No 49
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.01 E-value=0.12 Score=35.63 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=52.5
Q ss_pred CcCCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHH-Hhhh
Q psy17185 3 AKRNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGL-TFIA 77 (121)
Q Consensus 3 ~k~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL-~ac~ 77 (121)
..-++++.+++.+||.++ ..+.+. -++...+.||+++..+++...|..|. .+....+.-..+.|=+.|- +..+
T Consensus 10 ~~l~~ee~~el~~WL~~l-~Ls~~~-rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~S~~~K~~NW~~ln~kvl~ 85 (127)
T 2ee7_A 10 SSVDEEALHQLYLWVDNI-PLSRPK-RNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLK 85 (127)
T ss_dssp SSCCHHHHHHHHHHHHHS-CCSCCS-SCHHHHHTTSHHHHHHHHHHCTTTCCCSSCCCCSSHHHHHHHHHHHHHHTTG
T ss_pred CCCCHHHHHHHHHHHHcC-CCCCCC-CchhhhccchhHHHHHHHHHCcCcccccccCCCCcHHHHHHhHHHHHHHHHH
Confidence 346788899999999953 333332 25889999999999999999998773 3333344446778888884 5555
No 50
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=93.80 E-value=0.021 Score=49.17 Aligned_cols=73 Identities=18% Similarity=0.293 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHHhhcCCCcc--cccCCCCchhHHHHHHHHHHhhh---------
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLINKLKPGSVA--KINSSGGQFKFMENINKGLTFIA--------- 77 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N~l~P~~v~--ki~~~~~~f~~~eNI~~FL~ac~--------- 77 (121)
++.+..|.+..+.. +--.-.+|-.+++||+++|.|++.+.|+.|. .++.. ...+|....+..++
T Consensus 123 ~~~ll~W~~~~~~~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~----~~~~n~~~a~~~a~~~lg~~~~l 198 (863)
T 1sjj_A 123 KEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKD----DPLTNLNTAFDVAEKYLDIPKML 198 (863)
T ss_dssp TTTTHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSC----CCGGGCTHHHHHHHHHHCCCCSC
T ss_pred HHHHHHHHHHhccCCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCC----CHHHHHHHHHHHHHHhCCCCCcc
Confidence 45688999987742 1111236888999999999999999999883 22221 24567777776665
Q ss_pred hccceecCC
Q psy17185 78 ITPQVFSND 86 (121)
Q Consensus 78 ~~~DLfe~k 86 (121)
.+.|+.+..
T Consensus 199 ~~ed~~~~~ 207 (863)
T 1sjj_A 199 DAEDIVGTA 207 (863)
T ss_dssp CHHHHTTCS
T ss_pred CHHHHhCCC
Confidence 566766653
No 51
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=93.32 E-value=0.14 Score=36.53 Aligned_cols=70 Identities=14% Similarity=0.273 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCcchHHHHhhhHHHHHHHHHhhcCCCc-----ccccCC-CCch-hHHHHHHHHHHhhh
Q psy17185 5 RNPEQDKEAQAWIETVTGQKFPAGVLYEDAIKDGQILCHLINKLKPGSV-----AKINSS-GGQF-KFMENINKGLTFIA 77 (121)
Q Consensus 5 ~d~~~e~~~~~WIe~vl~~~~~~~~~~~~~LrDGviLC~L~N~l~P~~v-----~ki~~~-~~~f-~~~eNI~~FL~ac~ 77 (121)
...+....+..||+...... +. .=.+.|.||++|.++++.|.|... .+++.. +..+ ..+.|+...++...
T Consensus 6 ~~~~~~~aLl~W~~tf~~~~-~~--~~~~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~ 82 (164)
T 1wix_A 6 SGLPLCDSLIIWLQTFKTAS-PC--QDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGIT 82 (164)
T ss_dssp CSCHHHHHHHHHHTTCCCSS-CC--CSHHHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCC-Cc--CcHHHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHHHHHHH
Confidence 44677899999998753221 22 236899999999999999999764 345432 2233 35677777777665
No 52
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=54.60 E-value=2.6 Score=26.45 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCC---CCCCcchHHHHhhhHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ---KFPAGVLYEDAIKDGQILCHLIN 46 (121)
Q Consensus 10 e~~~~~WIe~vl~~---~~~~~~~~~~~LrDGviLC~L~N 46 (121)
++.|++||.-+..+ +++. .++...=.||..||.|-.
T Consensus 16 ~~~V~~WL~w~~~e~~l~l~~-~~~~~f~m~G~~Lc~ls~ 54 (82)
T 1sv0_C 16 RADVWKWLINMAVSEGLEVTA-ELPQKFPMNGKALCLMSL 54 (82)
T ss_dssp HHHHHHHHHHHHHHHTCCCCT-HHHHTCCSCHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHhCCCCCC-CccccCCCCHHHHHhCCH
Confidence 68899999866443 3333 234333379999998754
No 53
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=35.52 E-value=20 Score=17.03 Aligned_cols=11 Identities=27% Similarity=0.670 Sum_probs=8.4
Q ss_pred HHHHHHHHHHH
Q psy17185 10 DKEAQAWIETV 20 (121)
Q Consensus 10 e~~~~~WIe~v 20 (121)
-..+++||+++
T Consensus 7 vDSV~rWmeDL 17 (22)
T 3ro3_B 7 VDSVQRWMEDL 17 (26)
T ss_pred hHHHHHHHHHH
Confidence 35688999975
No 54
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=35.34 E-value=4.4 Score=25.91 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLIN 46 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N 46 (121)
+++|.+||.-+..+ +++.. ++...=.||..||.|-.
T Consensus 17 ~~~V~~WL~w~~~ef~L~~~-~~~~f~mdGk~Lc~Ls~ 53 (89)
T 1ji7_A 17 RDDVAQWLKWAENEFSLRPI-DSNTFEMNGKALLLLTK 53 (89)
T ss_dssp HHHHHHHHHHHHHHTTCSCC-CTTTTCSCHHHHTTCCH
T ss_pred HHHHHHHHHHHHHhcCCCCC-chhcCCCCHHHHHcCCH
Confidence 68899999876432 23221 12222378888887643
No 55
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.54 E-value=6.5 Score=25.40 Aligned_cols=40 Identities=20% Similarity=0.357 Sum_probs=25.1
Q ss_pred CHHH--HHHHHHHHHHHhC---CCCCCcchHHHHhhhHHHHHHHHH
Q psy17185 6 NPEQ--DKEAQAWIETVTG---QKFPAGVLYEDAIKDGQILCHLIN 46 (121)
Q Consensus 6 d~~~--e~~~~~WIe~vl~---~~~~~~~~~~~~LrDGviLC~L~N 46 (121)
||.. +..|++||.-... .++.. .++...-.||--||.+-.
T Consensus 23 dP~~Ws~~~V~~WL~Wavke~~~dl~~-i~~~~f~m~G~~LC~msk 67 (92)
T 2e8p_A 23 QPQFWSKTQVLDWISYQVEKNKYDASA-IDFSRCDMDGATLCNCAL 67 (92)
T ss_dssp CGGGCCHHHHHHHHHHHHHHTTCCCSS-CCTTTCCCCSHHHHHSCH
T ss_pred ChhhcCHHHHHHHHHHHHHHhCCCCCC-CChhhcCCCHHHHHcCCH
Confidence 4444 6889999997754 23222 123334689999998754
No 56
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=31.77 E-value=8.4 Score=23.56 Aligned_cols=26 Identities=0% Similarity=0.054 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHhhh----hccceecCCCh
Q psy17185 63 FKFMENINKGLTFIA----ITPQVFSNDSI 88 (121)
Q Consensus 63 f~~~eNI~~FL~ac~----~~~DLfe~kn~ 88 (121)
..+--=++.|++..- -+.||+|+||-
T Consensus 15 ~dmdavls~fvrstgaepgLaRDlleGKnW 44 (73)
T 2l2d_A 15 LDMDAVLSDFVRSTGAEPGLARDLLEGKNW 44 (73)
T ss_dssp CCHHHHHHHHHHHHCCCHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHhcCCCcchhHHhhccCCc
Confidence 444556788998765 78899999998
No 57
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=31.40 E-value=6.9 Score=25.12 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLI 45 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~ 45 (121)
+++|.+||.-+..+ +++.. ++...=.||..||.|-
T Consensus 17 ~~~V~~WL~w~~~ef~L~~i-~~~~f~mdGk~Lc~Lt 52 (93)
T 2qar_B 17 RDDVAQWLKWAENEFSLSPI-DSNTFEMNGKALLLLT 52 (93)
T ss_dssp HHHHHHHHHHHHHHTTCCCC-CGGGGCSCHHHHTTCC
T ss_pred HHHHHHHHHHHHHhcCCCCc-chhcCCCCHHHHHcCC
Confidence 68899999876532 23321 2222237888888654
No 58
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=28.83 E-value=12 Score=23.92 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLIN 46 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N 46 (121)
++.|++||.-+..+ ++++. ++...=.||.-||.|--
T Consensus 28 ~~~V~~WL~W~~~ef~L~~v-~~~~f~m~G~~LC~ls~ 64 (91)
T 1sxd_A 28 TDQVLHWVVWVMKEFSMTDI-DLTTLNISGRELCSLNQ 64 (91)
T ss_dssp HHHHHHHHHHHHHHTTCCCS-CSGGGCSCHHHHHHSCH
T ss_pred HHHHHHHHHHHHHccCCCCC-ChhhCCCCHHHHHcCCH
Confidence 67888998865442 34321 22333588999997643
No 59
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=28.35 E-value=93 Score=18.19 Aligned_cols=69 Identities=10% Similarity=-0.005 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhCCC---CCCcchHHHHh-hhHHHHHHHHHhhcCCCcccccCCC---CchhHHHHHHHHHHh
Q psy17185 7 PEQDKEAQAWIETVTGQK---FPAGVLYEDAI-KDGQILCHLINKLKPGSVAKINSSG---GQFKFMENINKGLTF 75 (121)
Q Consensus 7 ~~~e~~~~~WIe~vl~~~---~~~~~~~~~~L-rDGviLC~L~N~l~P~~v~ki~~~~---~~f~~~eNI~~FL~a 75 (121)
.+..+.++++|.++++.+ +.++.+|.+.. -|-+-+-.|+..|.-..-.++.... -.|.-...+..|+..
T Consensus 3 ~~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~ 78 (80)
T 1dv5_A 3 EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHH
Confidence 456788899999988854 33444565554 6778888999888865544444322 246666667666653
No 60
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=27.36 E-value=8.9 Score=24.23 Aligned_cols=36 Identities=14% Similarity=0.300 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHHhhhHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDAIKDGQILCHLIN 46 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~LrDGviLC~L~N 46 (121)
++.|++||.-+..+ ++++. ++...=.||.-||.|--
T Consensus 15 ~~~V~~WL~W~~~ef~L~~i-~~~~F~m~G~~LC~ls~ 51 (85)
T 1sv0_A 15 REDVLVFLRFCVREFDLPKL-DFDLFQMNGKRLCLLTR 51 (85)
T ss_dssp HHHHHHHHHHHHHHTTCCCC-CGGGGCSCHHHHTTCCH
T ss_pred HHHHHHHHHHHHHccCCCCC-ChhhCCCCHHHHHcCCH
Confidence 67889998865543 34332 22223489999997643
No 61
>1hlv_A CENP-B, major centromere autoantigen B; helix-turn-helix, protein-DNA complex, riken structural genomics/proteomics initiative, RSGI; 2.50A {Homo sapiens} SCOP: a.4.1.7 a.4.1.7 PDB: 1bw6_A
Probab=26.00 E-value=67 Score=20.37 Aligned_cols=23 Identities=13% Similarity=0.341 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCC
Q psy17185 5 RNPEQDKEAQAWIETVTGQKFPA 27 (121)
Q Consensus 5 ~d~~~e~~~~~WIe~vl~~~~~~ 27 (121)
-.++.|+.+..||+.+....+|.
T Consensus 73 ~~~~~E~~L~~Wi~~~~~~g~pv 95 (131)
T 1hlv_A 73 PYDKLEGLLIAWFQQIRAAGLPV 95 (131)
T ss_dssp TTHHHHHHHHHHHHHHGGGTCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCC
Confidence 35778999999999988666664
No 62
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.79 E-value=11 Score=24.37 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhCC-CCCCcchHHHH-hhhHHHHHHHHH
Q psy17185 10 DKEAQAWIETVTGQ-KFPAGVLYEDA-IKDGQILCHLIN 46 (121)
Q Consensus 10 e~~~~~WIe~vl~~-~~~~~~~~~~~-LrDGviLC~L~N 46 (121)
++.|++||.-+..+ +++. .++... =.||.-||.|-.
T Consensus 29 ~~~V~~WL~W~~~ef~L~~-v~~~~F~~m~G~~LC~ls~ 66 (98)
T 1x66_A 29 QEHVRQWLEWAIKEYSLME-IDTSFFQNMDGKELCKMNK 66 (98)
T ss_dssp TTHHHHHHHHHHHHTTCCS-CCGGGGTTCCHHHHHHCCH
T ss_pred HHHHHHHHHHHHHhcCCCC-CChhhCCCCCHHHHHcCCH
Confidence 57888898865543 3433 234444 478888887754
No 63
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.84 E-value=99 Score=20.11 Aligned_cols=41 Identities=5% Similarity=0.047 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhC--CCCCCcchHHHHhhhHHHHHHHHHhhc
Q psy17185 9 QDKEAQAWIETVTG--QKFPAGVLYEDAIKDGQILCHLINKLK 49 (121)
Q Consensus 9 ~e~~~~~WIe~vl~--~~~~~~~~~~~~LrDGviLC~L~N~l~ 49 (121)
.|+.+.+--.++|+ ..+..+++|++.=-|-+.+.+|+..|+
T Consensus 26 ~E~~La~iW~~vL~~~~~i~~~ddFF~lGG~SLla~rLv~~ir 68 (110)
T 2cq8_A 26 TAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVK 68 (110)
T ss_dssp HHHHHHHHHHHHCSSCSCCCTTCBHHHHHCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCHHhcCChHHHHHHHHHHHH
Confidence 34444432245787 567777789876566677788888776
Done!