BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17187
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DR+L P K+QLQL + C+L+ASK+RE L +E
Sbjct: 64 MLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEK 123
Query: 78 LVYYSDYTFSPHTLKTTE 95
L Y+D++ SP L+ E
Sbjct: 124 LCIYTDHSVSPRQLRDWE 141
>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DR+L P K+QLQL + C+L+ASK+RE L +E
Sbjct: 64 MLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEK 123
Query: 78 LVYYSDYTFSPHTLKTTE 95
L Y+D+ SP L+ E
Sbjct: 124 LCIYTDHAVSPRQLRDWE 141
>sp|P48961|CCND3_RAT G1/S-specific cyclin-D3 OS=Rattus norvegicus GN=Ccnd3 PE=2 SV=1
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE VFP A++ +DR+L P K+QLQL + CLL+ASK+RE L +E
Sbjct: 64 MLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRKAQLQLLGTVCLLLASKLRETTPLTIEK 123
Query: 78 LVYYSDYTFSPHTLKTTE 95
L Y+D +P L+ E
Sbjct: 124 LCIYTDQAMAPWQLREWE 141
>sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D3 OS=Mus musculus GN=Ccnd3 PE=2 SV=1
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE VFP A++ +DR+L P K+QLQL + CLL+ASK+RE L +E
Sbjct: 64 MLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRKAQLQLLGTVCLLLASKLRETTPLTIEK 123
Query: 78 LVYYSDYTFSPHTLKTTE 95
L Y+D +P L+ E
Sbjct: 124 LCIYTDQAVAPWQLREWE 141
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL + P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSFEPLKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 124 LCIYTDNSIRPDEL 137
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P KS LQL + C+ +ASK++E L E
Sbjct: 63 MLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKETSPLTAEK 122
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 123 LCIYTDNSIKPQEL 136
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 124 LCIYTDNSIRPDEL 137
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K+ LQL + C+ +ASK++E L E
Sbjct: 63 MLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETIPLTAEK 122
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 123 LCIYTDNSIKPQEL 136
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P+ KS LQL + C+ +ASK++E L E
Sbjct: 62 MLEVCEEQKCEEEVFPLAMNYLDRFLSVEPLRKSWLQLLGATCMFLASKMKETIPLTAEK 121
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 122 LCIYTDNSIRPDEL 135
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSP 88
L Y+D + P
Sbjct: 124 LCIYTDNSIRP 134
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSP 88
L Y+D + P
Sbjct: 124 LCIYTDNSIRP 134
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K+ LQL + C+ +ASK++E L E
Sbjct: 63 MLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETIPLTAEK 122
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 123 LCIYTDNSIKPQEL 136
>sp|P24385|CCND1_HUMAN G1/S-specific cyclin-D1 OS=Homo sapiens GN=CCND1 PE=1 SV=1
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSP 88
L Y+D + P
Sbjct: 124 LCIYTDNSIRP 134
>sp|Q5R6J5|CCND1_PONAB G1/S-specific cyclin-D1 OS=Pongo abelii GN=CCND1 PE=2 SV=1
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSP 88
L Y+D + P
Sbjct: 124 LCIYTDNSIRP 134
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ ++RFL P++KS+LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLNRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEK 123
Query: 78 LVYYSDYTFSPHTLKTTE 95
L Y+D + P L E
Sbjct: 124 LCIYTDNSIRPDELLQME 141
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K+ LQL + C+ +ASK++E L E
Sbjct: 62 MLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETIPLTAEK 121
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 122 LCIYTDNSVKPQEL 135
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K+ LQL + C+ +ASK++E L E
Sbjct: 62 MLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETIPLTAEK 121
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 122 LCIYTDNSVKPQEL 135
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P +K++LQL + C+ +ASK++E L E
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSVEPTKKTRLQLLGATCMFLASKMKETVPLTAEK 123
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 124 LCIYTDNSVRPGEL 137
>sp|P53782|CCND2_XENLA G1/S-specific cyclin-D2 OS=Xenopus laevis GN=ccnd2 PE=2 SV=1
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K LQL + C+ +ASK++E L E
Sbjct: 63 MLEVCEEQRCEEEVFPMAMNYLDRFLAVIPTRKCHLQLLGAVCMFLASKLKETIPLTAEK 122
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 123 LCIYTDNSIKPQEL 136
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 18 LLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVED 77
+L++CEE+ CE +VFP A++ +DRFL P K LQL + C+ +ASK++E L E
Sbjct: 63 MLEVCEEQKCEEEVFPLAMNYLDRFLAVVPTRKCHLQLLGAVCMFLASKLKETIPLTAEK 122
Query: 78 LVYYSDYTFSPHTL 91
L Y+D + P L
Sbjct: 123 LCIYTDNSIKPQEL 136
>sp|Q01043|CGH2_SHV21 Cyclin homolog OS=Saimiriine herpesvirus 2 (strain 11) GN=72 PE=1
SV=1
Length = 254
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
+++ L + + LCE + VFP +VSI+DR+LC K LQ +AC+LI S
Sbjct: 47 VTVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGS 106
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTLKTTEK 96
KIR + V L Y S F+ L EK
Sbjct: 107 KIRTVKPMTVSKLTYLSCDCFTNLELINQEK 137
>sp|Q60FX9|CCNB2_ANGJA G2/mitotic-specific cyclin-B2 OS=Anguilla japonica GN=ccnb2 PE=2
SV=1
Length = 394
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 1 MSAFAISIQTNVFLYSSLLQLCEERHCEYQVFP----YAVSIMDRFLCYCPMEKSQLQLT 56
M + I+ + L L+Q+ H +Q+ V+I+DRFL P+ + +LQL
Sbjct: 152 MQGYEINERMRALLVDWLIQV----HSRFQLLQETLYMTVAILDRFLQVQPVSRRKLQLV 207
Query: 57 ASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
+L+ASK E +A V D VY +D F+ ++ E
Sbjct: 208 GVTAMLVASKYEEMYAPEVGDFVYITDNAFTKAQIREME 246
>sp|P13351|CCNB2_XENLA G2/mitotic-specific cyclin-B2 OS=Xenopus laevis GN=ccnb2 PE=1 SV=1
Length = 392
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 9 QTNVFLYSSLLQLCEERHCEYQVFP----YAVSIMDRFLCYCPMEKSQLQLTASACLLIA 64
+ N + + L+ + H +Q+ V+IMDRFL P+ +S+LQL LLIA
Sbjct: 157 EINERMRAILVDWLVQVHSRFQLLQETLYMGVAIMDRFLQVQPVSRSKLQLVGVTSLLIA 216
Query: 65 SKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
SK E + V D VY +D ++ ++ E
Sbjct: 217 SKYEEMYTPEVADFVYITDNAYTASQIREME 247
>sp|P24862|CCNB_PATVU G2/mitotic-specific cyclin-B OS=Patella vulgata PE=2 SV=1
Length = 408
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 36 VSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
VSI+DRFL P+ +++LQL +L+ASK E +A V D VY +D ++ ++T E
Sbjct: 209 VSIIDRFLQVHPISRNKLQLVGVTSMLLASKYEEMYAPEVADFVYITDNAYTKADIRTME 268
Query: 96 K 96
+
Sbjct: 269 Q 269
>sp|O95067|CCNB2_HUMAN G2/mitotic-specific cyclin-B2 OS=Homo sapiens GN=CCNB2 PE=1 SV=1
Length = 398
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 36 VSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
V IMDRFL P+ + +LQL LL+ASK E + +ED VY +D ++ ++ E
Sbjct: 191 VGIMDRFLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREME 250
>sp|Q4R7A8|CCNB2_MACFA G2/mitotic-specific cyclin-B2 OS=Macaca fascicularis GN=CCNB2 PE=2
SV=1
Length = 398
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 36 VSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
V+IMDRFL P+ + +LQL LL+ASK E + +ED VY +D ++ ++ E
Sbjct: 191 VAIMDRFLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREME 250
>sp|P24868|CG21_YEAST G2/mitotic-specific cyclin-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB1 PE=1 SV=1
Length = 471
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 26 HCEYQVFP----YAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYY 81
H ++ + P A++IMDRFLC ++ ++LQL ++CL IASK E ++ ++ Y
Sbjct: 252 HNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYE 311
Query: 82 SDYTFSPHTLKTTEK 96
+D S +K E+
Sbjct: 312 TDGACSVEDIKEGER 326
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 196 ITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 255
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T+S
Sbjct: 256 KFEEIYPPEVAEFVYITDDTYS 277
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 195 ITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 254
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T+S
Sbjct: 255 KFEEIYPPEVAEFVYITDDTYS 276
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE Q +VS +DRFL + + + +LQL +AC+L+A+
Sbjct: 193 INSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKLQLVGAACMLVAA 252
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T++
Sbjct: 253 KFEEIYPPEVAEFVYITDDTYT 274
>sp|O77689|CCNB2_BOVIN G2/mitotic-specific cyclin-B2 OS=Bos taurus GN=CCNB2 PE=2 SV=2
Length = 398
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 36 VSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
V++MDR+L P+ + +LQL LL+ASK E + +ED VY +D ++ ++ E
Sbjct: 191 VAVMDRYLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREME 250
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 204 ITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 263
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T++
Sbjct: 264 KFEEIYPPEVAEFVYITDDTYT 285
>sp|O93229|CCNB2_RANJA G2/mitotic-specific cyclin-B2 OS=Rana japonica GN=CCNB2 PE=2 SV=1
Length = 392
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MSAFAISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASAC 60
+ I+ + L L+Q+ + ++IMDRFL P+ + +LQL
Sbjct: 151 LDGMEINERMRAILVDWLIQVNSRFQFLQETLYMGIAIMDRFLQVQPISRGKLQLVGVTS 210
Query: 61 LLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
LL+ASK E ++ V D Y +D ++ ++ E
Sbjct: 211 LLLASKYEEMYSPEVADFAYITDNAYTTSQIREME 245
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 206 ITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 265
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T++
Sbjct: 266 KFEEIYPPEVAEFVYITDDTYT 287
>sp|P47827|CCNA2_XENLA Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1
Length = 415
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 188 ITGNMRAILVDWLVEVGEEYKLQNETLYLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 247
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E + V + VY +D T++
Sbjct: 248 KFEEIYPPEVAEFVYITDDTYT 269
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 14 LYSSLLQLCEERHCEYQVFP----YAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRE 69
+ S L+ E H ++ + P V+I+DRFL + + +LQL + LLIASK E
Sbjct: 190 MRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYEE 249
Query: 70 CHALCVEDLVYYSDYTFSPHTLKTTEK 96
V DLVY +D +++ + EK
Sbjct: 250 IWPPQVNDLVYVTDNSYNSRQILVMEK 276
>sp|P37883|CCNB2_MESAU G2/mitotic-specific cyclin-B2 OS=Mesocricetus auratus GN=CCNB2 PE=2
SV=1
Length = 397
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 36 VSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
++IMDRFL P+ + +LQL LL+ASK E + +ED VY +D ++ ++ E
Sbjct: 190 IAIMDRFLQAQPVCRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREME 249
>sp|Q39067|CCB12_ARATH Cyclin-B1-2 OS=Arabidopsis thaliana GN=CYCB1-2 PE=1 SV=2
Length = 445
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQV----FPYAVSIMDRFLCYCPMEKSQLQLTASACL 61
I + N + + L+ E H ++++ V+I+DRFL + K +LQL + L
Sbjct: 205 IQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISAL 264
Query: 62 LIASKIRECHALCVEDLVYYSDYTFSPHTLKTTEK 96
LIASK E V DLVY +D +S + EK
Sbjct: 265 LIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEK 299
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 30 QVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHALCVEDLVYYSDYTFSPH 89
+ F V+I+DRFL P+ + +LQL + LL+++K E VEDLV +D+ +S
Sbjct: 216 ETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYEEIWPPQVEDLVDIADHAYSHK 275
Query: 90 TLKTTEK 96
+ EK
Sbjct: 276 QILVMEK 282
>sp|P29332|CCNB2_CHICK G2/mitotic-specific cyclin-B2 OS=Gallus gallus GN=CCNB2 PE=2 SV=1
Length = 399
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 1 MSAFAISIQTNVFLYSSLLQLCEERHCEYQVFPYA----VSIMDRFLCYCPMEKSQLQLT 56
+ I+ + L L+Q+ H +Q+ V++MDRFL P+ + +LQL
Sbjct: 160 LDGKTINGRMRAILVDWLVQV----HSRFQLLQETLYMCVAVMDRFLQSHPVPRKRLQLV 215
Query: 57 ASACLLIASKIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
LL+ASK E ++ + D VY +D ++ ++ E
Sbjct: 216 GVTALLLASKYEEMYSPDIADFVYITDNAYNSAEVREME 254
>sp|Q9C6A9|CCA32_ARATH Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1
Length = 372
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 14 LYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIASKIRECHAL 73
L L+++ EE + VS +DRFL + K +LQL + +LIASK E
Sbjct: 141 LVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPP 200
Query: 74 CVEDLVYYSDYTFS 87
V+D Y +D TFS
Sbjct: 201 KVDDFCYITDNTFS 214
>sp|Q6AY13|CCNA1_RAT Cyclin-A1 OS=Rattus norvegicus GN=Ccna1 PE=2 SV=1
Length = 421
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 195 ITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLAS 254
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
K E + V++ VY +D T++ L E
Sbjct: 255 KYEEIYPPDVDEFVYITDDTYTKRQLLRME 284
>sp|Q61456|CCNA1_MOUSE Cyclin-A1 OS=Mus musculus GN=Ccna1 PE=1 SV=2
Length = 421
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 195 ITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLAS 254
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTL 91
K E + V++ VY +D T++ L
Sbjct: 255 KYEEIYPPDVDEFVYITDDTYTKRQL 280
>sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1
Length = 465
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 239 ITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLAS 298
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTLKTTE 95
K E + V++ VY +D T++ L E
Sbjct: 299 KYEEIYPPEVDEFVYITDDTYTKRQLLKME 328
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + + AV+ +DRFL + + +LQL +A +L+AS
Sbjct: 170 ITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 229
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTLKTTEKPAVYLNNTHVIMKKVK-DLVGTSMATF 122
K E + V + VY +D T++ + E H+I+K + DL ++ F
Sbjct: 230 KFEEIYPPEVAEFVYITDDTYNKKQVLRME---------HLILKVLSFDLAAPTINQF 278
>sp|Q2QN26|CCA32_ORYSJ Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1
Length = 385
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1 MSAFAISIQTNV--FLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTAS 58
+ A + + N+ L L+++ +E AVS +DR+L P+ +++LQL
Sbjct: 139 IEAVQVDVTANMRAILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPLRRNRLQLLGV 198
Query: 59 ACLLIASKIRECHALCVEDLVYYSDYTFS 87
+LIA+K E VED Y +D T++
Sbjct: 199 GAMLIAAKYEEISPPHVEDFCYITDNTYT 227
>sp|P13952|CCNB_SPISO G2/mitotic-specific cyclin-B OS=Spisula solidissima PE=2 SV=1
Length = 428
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ + L L Q+ H + V+I+DR L P+ +++LQL +LIAS
Sbjct: 196 ITGKMRAILIDWLCQVHHRFHLLQETLYLTVAIIDRLLQESPVPRNKLQLVGVTSMLIAS 255
Query: 66 KIRECHALCVEDLVYYSDYTFS 87
K E +A V D VY +D ++
Sbjct: 256 KYEEMYAPEVADFVYITDNAYT 277
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 2 SAFAISIQTNV------FLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQL 55
+++ + +Q ++ L L+++ EE V+++DRF+ + +EK +LQL
Sbjct: 198 TSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQL 257
Query: 56 TASACLLIASKIRECHALCVEDLVYYSDYTFS 87
C+LIASK E A +E+ + +D T++
Sbjct: 258 LGITCMLIASKYEEISAPRLEEFCFITDNTYT 289
>sp|P18606|CCNA1_XENLA Cyclin-A1 OS=Xenopus laevis GN=ccna1 PE=2 SV=1
Length = 418
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 6 ISIQTNVFLYSSLLQLCEERHCEYQVFPYAVSIMDRFLCYCPMEKSQLQLTASACLLIAS 65
I+ L L+++ EE + A++ +DRFL + + +LQL +A +L+AS
Sbjct: 192 ITSAMRTILVDWLVEVGEEYKLHTETLYLAMNYLDRFLSCMSVLRGKLQLVGTAAILLAS 251
Query: 66 KIRECHALCVEDLVYYSDYTFSPHTLKTTEKPAVYLNNTHVIMK 109
K E + V++ VY +D T+S L L HV++K
Sbjct: 252 KYEEIYPPDVDEFVYITDDTYSKKQL---------LRMEHVLLK 286
>sp|Q9IBG0|CCNB2_ORYLA G2/mitotic-specific cyclin-B2 OS=Oryzias latipes GN=ccnb2 PE=2 SV=1
Length = 387
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 1 MSAFAISIQTNVFLYSSLLQLCEERHCEYQVFP----YAVSIMDRFLCYCPMEKSQLQLT 56
M + ++ + L L+Q+ H +Q+ V+I+DRFL P+ + +LQL
Sbjct: 146 MQGYEVTERMRALLVDWLVQV----HSRFQLLQETLYLTVAILDRFLQVHPVSRRKLQLV 201
Query: 57 ASACLLIASKIRECHALCVEDLVYYSDYTFS 87
+L+A K E +A V D Y +D F+
Sbjct: 202 GVTAMLVACKYEEMYAPEVGDFAYITDNAFT 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,057,597
Number of Sequences: 539616
Number of extensions: 1267768
Number of successful extensions: 3941
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3785
Number of HSP's gapped (non-prelim): 187
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)