Query psy17188
Match_columns 504
No_of_seqs 1151 out of 3706
Neff 11.6
Searched_HMMs 29240
Date Sat Aug 17 00:06:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1E-58 3.5E-63 462.5 49.1 445 42-504 18-603 (611)
2 1nr0_A Actin interacting prote 100.0 2.5E-58 8.5E-63 459.7 48.3 414 71-504 18-559 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 4.1E-53 1.4E-57 421.3 53.2 391 71-504 180-572 (577)
4 2ymu_A WD-40 repeat protein; u 100.0 2.2E-52 7.6E-57 416.0 53.2 399 64-504 11-449 (577)
5 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-50 4.5E-55 417.9 43.7 422 71-504 17-653 (902)
6 1pgu_A Actin interacting prote 100.0 1.8E-49 6.3E-54 398.2 45.0 407 71-504 18-606 (615)
7 3sfz_A APAF-1, apoptotic pepti 100.0 8.3E-50 2.8E-54 431.6 40.6 435 48-504 621-1241(1249)
8 3sfz_A APAF-1, apoptotic pepti 100.0 6.1E-49 2.1E-53 424.8 45.1 403 65-504 611-1150(1249)
9 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-48 1.4E-52 399.3 44.9 387 105-504 9-597 (902)
10 1gxr_A ESG1, transducin-like e 100.0 3.8E-47 1.3E-51 351.9 43.0 329 69-468 7-335 (337)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-46 6.3E-51 347.4 39.6 323 104-477 5-342 (345)
12 1pgu_A Actin interacting prote 100.0 2E-46 6.9E-51 376.1 41.9 368 111-504 16-564 (615)
13 3ow8_A WD repeat-containing pr 100.0 6E-46 2.1E-50 339.8 40.3 288 156-469 29-320 (321)
14 1vyh_C Platelet-activating fac 100.0 4.5E-46 1.5E-50 353.0 39.6 300 155-504 104-403 (410)
15 1vyh_C Platelet-activating fac 100.0 8.8E-46 3E-50 351.0 40.0 288 107-425 102-410 (410)
16 1got_B GT-beta; complex (GTP-b 100.0 1.6E-45 5.3E-50 340.6 39.1 291 105-423 46-340 (340)
17 4g56_B MGC81050 protein; prote 100.0 6.3E-46 2.2E-50 345.0 35.8 323 117-473 9-346 (357)
18 1got_B GT-beta; complex (GTP-b 100.0 1.1E-44 3.7E-49 335.0 43.5 282 154-504 50-335 (340)
19 2ynn_A Coatomer subunit beta'; 100.0 8.4E-45 2.9E-49 330.2 39.6 286 195-503 5-294 (304)
20 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-45 7.5E-50 380.6 40.0 401 71-500 13-487 (814)
21 3ow8_A WD repeat-containing pr 100.0 5.9E-45 2E-49 333.2 37.3 286 111-425 30-320 (321)
22 3iz6_a 40S ribosomal protein R 100.0 1.4E-45 4.7E-50 346.3 33.5 307 103-472 55-377 (380)
23 4gqb_B Methylosome protein 50; 100.0 9.6E-45 3.3E-49 334.1 37.8 293 111-427 28-332 (344)
24 2pbi_B Guanine nucleotide-bind 100.0 1.8E-44 6.2E-49 334.9 38.7 291 106-423 56-354 (354)
25 4g56_B MGC81050 protein; prote 100.0 1.5E-44 5E-49 335.8 37.7 293 111-427 40-344 (357)
26 3frx_A Guanine nucleotide-bind 100.0 2.5E-44 8.6E-49 329.3 38.1 296 105-471 8-318 (319)
27 2ynn_A Coatomer subunit beta'; 100.0 4.2E-44 1.4E-48 325.6 39.3 289 107-470 6-302 (304)
28 1r5m_A SIR4-interacting protei 100.0 3.8E-44 1.3E-48 342.8 39.6 335 97-504 29-417 (425)
29 2pbi_B Guanine nucleotide-bind 100.0 1.6E-43 5.6E-48 328.5 41.3 294 195-504 56-349 (354)
30 4gqb_B Methylosome protein 50; 100.0 3.9E-44 1.3E-48 330.0 35.8 291 157-473 28-334 (344)
31 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-43 4.3E-48 367.5 42.6 361 107-504 6-415 (814)
32 2xzm_R RACK1; ribosome, transl 100.0 6.1E-43 2.1E-47 323.8 41.8 294 155-472 17-342 (343)
33 2pm9_A Protein WEB1, protein t 100.0 2.9E-45 9.9E-50 349.6 26.9 342 110-471 9-415 (416)
34 1erj_A Transcriptional repress 100.0 2.9E-43 1E-47 332.0 39.3 314 106-471 57-390 (393)
35 1gxr_A ESG1, transducin-like e 100.0 7.2E-43 2.5E-47 323.1 40.7 317 111-504 7-329 (337)
36 4ery_A WD repeat-containing pr 100.0 3.3E-42 1.1E-46 314.9 43.3 293 106-469 15-311 (312)
37 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-43 1.9E-47 324.1 37.3 287 157-504 13-327 (345)
38 2hes_X YDR267CP; beta-propelle 100.0 7.2E-43 2.5E-47 321.2 37.7 301 156-470 11-328 (330)
39 1erj_A Transcriptional repress 100.0 2.8E-42 9.5E-47 325.3 41.7 286 156-504 61-381 (393)
40 2xzm_R RACK1; ribosome, transl 100.0 2.3E-42 8E-47 319.9 39.8 302 103-427 10-341 (343)
41 2pm9_A Protein WEB1, protein t 100.0 5.6E-44 1.9E-48 340.7 29.8 330 160-504 13-406 (416)
42 2hes_X YDR267CP; beta-propelle 100.0 2E-42 6.9E-47 318.2 37.8 301 105-426 5-328 (330)
43 3iz6_a 40S ribosomal protein R 100.0 3.1E-43 1.1E-47 330.3 32.7 307 182-504 47-367 (380)
44 3frx_A Guanine nucleotide-bind 100.0 6E-42 2.1E-46 313.5 39.8 280 154-504 12-309 (319)
45 4ery_A WD repeat-containing pr 100.0 7.8E-42 2.7E-46 312.4 40.5 289 193-504 13-304 (312)
46 3vl1_A 26S proteasome regulato 100.0 3.7E-43 1.3E-47 335.4 31.3 339 115-503 58-410 (420)
47 3ei3_B DNA damage-binding prot 100.0 8.1E-42 2.8E-46 321.8 37.6 307 106-470 65-382 (383)
48 4aow_A Guanine nucleotide-bind 100.0 9E-41 3.1E-45 309.5 41.0 305 101-428 25-339 (340)
49 2j04_B YDR362CP, TAU91; beta p 100.0 6.2E-42 2.1E-46 330.8 29.3 341 103-470 123-517 (524)
50 4aow_A Guanine nucleotide-bind 100.0 1E-39 3.6E-44 302.3 42.0 293 155-472 34-339 (340)
51 3k26_A Polycomb protein EED; W 100.0 8.2E-41 2.8E-45 313.0 34.5 309 111-425 16-365 (366)
52 3gre_A Serine/threonine-protei 100.0 1.9E-41 6.5E-46 325.2 30.0 353 104-504 52-432 (437)
53 3dm0_A Maltose-binding peripla 100.0 5.5E-40 1.9E-44 333.0 41.8 289 111-469 380-692 (694)
54 1r5m_A SIR4-interacting protei 100.0 1.4E-40 4.6E-45 318.1 33.0 329 65-469 39-424 (425)
55 4e54_B DNA damage-binding prot 100.0 6.1E-41 2.1E-45 320.8 29.6 306 111-474 117-434 (435)
56 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-39 7.9E-44 311.2 40.1 322 107-470 111-442 (445)
57 3vl1_A 26S proteasome regulato 100.0 1.5E-40 5E-45 317.4 31.4 328 74-426 59-419 (420)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-39 1.2E-43 310.1 40.9 308 157-504 116-430 (445)
59 3zwl_B Eukaryotic translation 100.0 5.1E-39 1.7E-43 301.1 41.0 288 192-504 21-338 (369)
60 3i2n_A WD repeat-containing pr 100.0 2.9E-40 1E-44 308.2 31.9 303 155-473 14-356 (357)
61 3zwl_B Eukaryotic translation 100.0 3.4E-39 1.2E-43 302.3 38.8 312 149-477 22-353 (369)
62 4aez_A CDC20, WD repeat-contai 100.0 2.8E-39 9.5E-44 306.1 35.5 290 161-478 95-388 (401)
63 2j04_A TAU60, YPL007P, hypothe 100.0 3.8E-41 1.3E-45 316.2 21.8 322 111-501 13-350 (588)
64 4gga_A P55CDC, cell division c 100.0 1.6E-38 5.6E-43 302.6 40.5 308 158-491 104-416 (420)
65 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-39 5.2E-44 305.2 32.8 298 157-473 6-364 (372)
66 3v7d_B Cell division control p 100.0 8.4E-39 2.9E-43 309.3 38.5 319 106-466 113-459 (464)
67 3k26_A Polycomb protein EED; W 100.0 1.9E-39 6.4E-44 303.8 32.6 296 157-470 16-366 (366)
68 3v7d_B Cell division control p 100.0 1.5E-38 5.1E-43 307.6 39.6 325 156-503 118-454 (464)
69 3dwl_C Actin-related protein 2 100.0 1.3E-40 4.5E-45 313.0 24.4 341 112-468 10-377 (377)
70 1sq9_A Antiviral protein SKI8; 100.0 2.2E-39 7.5E-44 306.9 32.5 303 155-472 12-397 (397)
71 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-40 6.4E-45 320.4 25.4 311 168-504 170-509 (524)
72 3i2n_A WD repeat-containing pr 100.0 2.6E-39 9E-44 301.7 32.4 296 111-428 16-355 (357)
73 3dm0_A Maltose-binding peripla 100.0 1.4E-38 5E-43 322.5 39.9 283 155-504 378-685 (694)
74 1k8k_C P40, ARP2/3 complex 41 100.0 4.8E-39 1.6E-43 301.8 33.4 310 111-428 6-363 (372)
75 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-38 1.1E-42 288.8 36.0 293 104-478 8-304 (313)
76 4h5i_A Guanine nucleotide-exch 100.0 5.6E-39 1.9E-43 299.0 31.4 295 112-471 13-344 (365)
77 4a11_B DNA excision repair pro 100.0 7.2E-38 2.5E-42 297.6 38.6 347 110-470 40-405 (408)
78 3ei3_B DNA damage-binding prot 100.0 3.6E-38 1.2E-42 296.9 35.9 288 195-504 65-374 (383)
79 4a11_B DNA excision repair pro 100.0 2.1E-38 7.1E-43 301.3 34.5 322 133-479 22-374 (408)
80 1sq9_A Antiviral protein SKI8; 100.0 1.4E-38 4.9E-43 301.3 32.4 295 111-427 14-396 (397)
81 2pm7_B Protein transport prote 100.0 4.3E-38 1.5E-42 284.9 33.1 257 156-425 6-284 (297)
82 1yfq_A Cell cycle arrest prote 100.0 3.8E-38 1.3E-42 292.1 33.3 275 157-504 9-315 (342)
83 2j04_A TAU60, YPL007P, hypothe 100.0 7.3E-40 2.5E-44 307.5 21.7 317 71-459 15-350 (588)
84 4e54_B DNA damage-binding prot 100.0 3.8E-38 1.3E-42 301.4 32.9 287 196-501 112-420 (435)
85 4ggc_A P55CDC, cell division c 100.0 1.3E-36 4.4E-41 278.7 41.6 286 161-472 27-317 (318)
86 3mmy_A MRNA export factor; mRN 100.0 1.8E-37 6.1E-42 290.5 35.1 280 156-503 36-337 (368)
87 2pm7_B Protein transport prote 100.0 2E-37 6.7E-42 280.6 33.4 253 111-379 7-285 (297)
88 4h5i_A Guanine nucleotide-exch 100.0 2.5E-38 8.4E-43 294.6 26.4 278 159-504 14-335 (365)
89 4aez_A CDC20, WD repeat-contai 100.0 2.9E-37 9.9E-42 292.2 33.4 291 111-431 89-385 (401)
90 3dwl_C Actin-related protein 2 100.0 1.9E-38 6.3E-43 298.3 23.6 323 158-504 10-371 (377)
91 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-36 1.1E-40 275.3 37.0 279 194-504 9-288 (313)
92 4gga_A P55CDC, cell division c 100.0 1.6E-36 5.5E-41 288.9 35.3 288 115-429 107-398 (420)
93 3bg1_A Protein SEC13 homolog; 100.0 2.4E-37 8.3E-42 282.5 28.2 251 111-379 11-293 (316)
94 3bg1_A Protein SEC13 homolog; 100.0 2.6E-37 8.7E-42 282.3 27.8 256 156-425 10-292 (316)
95 3dw8_B Serine/threonine-protei 100.0 1.7E-36 5.9E-41 291.7 34.4 305 110-425 25-445 (447)
96 3gre_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 298.5 26.4 347 71-467 63-437 (437)
97 4ggc_A P55CDC, cell division c 100.0 6E-36 2.1E-40 274.3 35.9 285 116-427 28-316 (318)
98 3dw8_B Serine/threonine-protei 100.0 1.6E-36 5.5E-41 291.9 33.3 294 201-503 26-438 (447)
99 1yfq_A Cell cycle arrest prote 100.0 1.9E-36 6.4E-41 280.7 32.2 291 111-467 9-321 (342)
100 3jrp_A Fusion protein of prote 100.0 1.1E-36 3.8E-41 286.3 31.0 256 157-427 9-288 (379)
101 3f3f_A Nucleoporin SEH1; struc 100.0 5.4E-36 1.8E-40 278.3 34.2 313 156-478 8-345 (351)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-36 6.9E-41 286.7 28.9 290 117-428 38-344 (402)
103 3jrp_A Fusion protein of prote 100.0 1.1E-35 3.8E-40 279.5 32.4 259 196-470 4-287 (379)
104 3mmy_A MRNA export factor; mRN 100.0 2.7E-35 9.4E-40 275.6 33.5 306 104-470 29-346 (368)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 9.8E-36 3.4E-40 282.0 29.5 289 161-473 36-345 (402)
106 1p22_A F-BOX/WD-repeat protein 100.0 3.8E-35 1.3E-39 280.8 33.7 296 157-490 131-433 (435)
107 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-35 9.7E-40 273.4 31.6 297 111-430 9-341 (351)
108 1p22_A F-BOX/WD-repeat protein 100.0 6E-35 2.1E-39 279.5 32.1 280 111-430 131-418 (435)
109 3jro_A Fusion protein of prote 100.0 9.3E-36 3.2E-40 303.4 25.8 258 156-428 6-287 (753)
110 3bws_A Protein LP49; two-domai 100.0 1.2E-33 4E-38 270.8 37.6 329 111-470 58-432 (433)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-34 1E-38 275.7 32.5 294 114-427 5-392 (450)
112 4gq1_A NUP37; propeller, trans 100.0 1.4E-34 5E-39 272.3 27.9 260 201-503 87-381 (393)
113 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.6E-33 1.2E-37 268.3 33.4 276 204-501 5-374 (450)
114 2xyi_A Probable histone-bindin 100.0 5.2E-33 1.8E-37 265.3 33.8 263 150-426 119-410 (430)
115 3jro_A Fusion protein of prote 100.0 3.1E-34 1E-38 292.2 26.3 256 111-382 7-288 (753)
116 2xyi_A Probable histone-bindin 100.0 5.1E-33 1.7E-37 265.3 32.5 263 197-472 122-412 (430)
117 3bws_A Protein LP49; two-domai 100.0 4.2E-32 1.4E-36 260.0 38.8 348 111-504 25-424 (433)
118 1l0q_A Surface layer protein; 100.0 9.5E-32 3.3E-36 253.8 39.6 332 126-500 3-366 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 5E-33 1.7E-37 258.1 30.1 282 157-472 17-338 (355)
120 3lrv_A PRE-mRNA-splicing facto 100.0 4.7E-33 1.6E-37 257.5 28.5 278 121-469 44-332 (343)
121 3vu4_A KMHSV2; beta-propeller 100.0 2.1E-32 7.2E-37 253.9 32.9 287 185-504 3-328 (355)
122 1k32_A Tricorn protease; prote 100.0 9.9E-32 3.4E-36 284.0 39.8 399 71-503 14-493 (1045)
123 1l0q_A Surface layer protein; 100.0 2.9E-31 9.8E-36 250.6 37.2 279 172-483 3-288 (391)
124 4gq1_A NUP37; propeller, trans 100.0 7E-33 2.4E-37 260.9 24.5 274 160-469 90-388 (393)
125 1nir_A Nitrite reductase; hemo 100.0 1.1E-30 3.7E-35 254.5 37.4 334 120-480 144-524 (543)
126 3lrv_A PRE-mRNA-splicing facto 100.0 6.2E-32 2.1E-36 250.0 25.6 274 210-504 43-325 (343)
127 1k32_A Tricorn protease; prote 100.0 9.3E-30 3.2E-34 269.0 36.6 345 112-502 13-441 (1045)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-30 4.9E-35 246.4 25.9 302 160-494 63-410 (415)
129 2w18_A PALB2, fancn, partner a 100.0 2.8E-29 9.4E-34 221.6 30.0 297 116-468 42-355 (356)
130 2ecf_A Dipeptidyl peptidase IV 100.0 2.4E-29 8.3E-34 257.5 29.7 331 159-501 36-444 (741)
131 2w18_A PALB2, fancn, partner a 100.0 6.5E-29 2.2E-33 219.2 26.6 281 162-504 42-349 (356)
132 1nir_A Nitrite reductase; hemo 100.0 2.8E-28 9.5E-33 237.5 33.9 323 166-500 144-497 (543)
133 2ecf_A Dipeptidyl peptidase IV 100.0 2.5E-28 8.7E-33 249.9 35.2 330 113-471 36-460 (741)
134 1xfd_A DIP, dipeptidyl aminope 100.0 7.3E-29 2.5E-33 253.2 30.3 339 115-475 18-448 (723)
135 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.1E-27 3.8E-32 226.6 32.4 301 114-452 63-410 (415)
136 2z3z_A Dipeptidyl aminopeptida 100.0 3.2E-27 1.1E-31 240.3 33.0 324 117-472 29-437 (706)
137 1ri6_A Putative isomerase YBHE 100.0 6.9E-27 2.4E-31 216.3 32.1 306 173-495 7-336 (343)
138 1ri6_A Putative isomerase YBHE 100.0 2E-26 6.8E-31 213.2 32.0 307 127-452 7-335 (343)
139 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-26 3.8E-31 236.4 28.9 324 162-501 28-420 (706)
140 3u4y_A Uncharacterized protein 100.0 9.1E-26 3.1E-30 207.7 32.2 285 166-473 4-307 (331)
141 1xfd_A DIP, dipeptidyl aminope 100.0 6E-26 2.1E-30 231.7 31.2 334 72-428 17-445 (723)
142 3vgz_A Uncharacterized protein 99.9 1E-24 3.5E-29 202.6 34.2 274 159-502 40-334 (353)
143 2ojh_A Uncharacterized protein 99.9 1.9E-25 6.4E-30 202.0 25.3 258 220-503 17-293 (297)
144 1z68_A Fibroblast activation p 99.9 2E-25 7E-30 227.4 28.1 337 118-478 20-451 (719)
145 1pby_B Quinohemoprotein amine 99.9 5.2E-25 1.8E-29 203.1 28.1 278 172-482 2-322 (337)
146 3vgz_A Uncharacterized protein 99.9 3.8E-24 1.3E-28 198.7 33.2 278 109-461 36-335 (353)
147 3u4y_A Uncharacterized protein 99.9 1E-24 3.6E-29 200.6 29.0 271 210-503 4-294 (331)
148 3hfq_A Uncharacterized protein 99.9 1.9E-24 6.5E-29 200.2 30.8 290 179-475 14-324 (347)
149 2ojh_A Uncharacterized protein 99.9 5.2E-25 1.8E-29 199.1 25.0 258 177-461 18-293 (297)
150 3scy_A Hypothetical bacterial 99.9 2.5E-23 8.6E-28 193.7 34.4 310 170-490 12-360 (361)
151 1pby_B Quinohemoprotein amine 99.9 1.8E-24 6.2E-29 199.5 25.3 277 126-436 2-320 (337)
152 3hfq_A Uncharacterized protein 99.9 1.8E-23 6.3E-28 193.6 30.3 280 133-430 15-323 (347)
153 1z68_A Fibroblast activation p 99.9 6.6E-24 2.3E-28 216.3 25.0 318 164-499 20-427 (719)
154 4a5s_A Dipeptidyl peptidase 4 99.9 1.1E-22 3.8E-27 207.2 33.1 352 114-478 17-457 (740)
155 1jmx_B Amine dehydrogenase; ox 99.9 6.9E-23 2.3E-27 189.9 27.1 280 164-480 4-335 (349)
156 3scy_A Hypothetical bacterial 99.9 6E-22 2E-26 184.4 33.1 297 133-448 26-360 (361)
157 3o4h_A Acylamino-acid-releasin 99.9 1.3E-23 4.3E-28 208.7 22.9 261 203-503 21-303 (582)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 2.8E-22 9.6E-27 190.1 27.5 261 134-424 23-331 (434)
159 3o4h_A Acylamino-acid-releasin 99.9 7.3E-23 2.5E-27 203.2 24.6 270 112-426 20-315 (582)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-22 1.3E-26 189.2 26.9 213 114-335 37-280 (434)
161 1jmx_B Amine dehydrogenase; ox 99.9 3.2E-22 1.1E-26 185.4 24.5 299 118-436 4-335 (349)
162 4a5s_A Dipeptidyl peptidase 4 99.9 1.1E-21 3.9E-26 199.7 30.6 324 160-500 17-434 (740)
163 2oiz_A Aromatic amine dehydrog 99.9 7.9E-22 2.7E-26 182.5 25.5 299 133-494 30-360 (361)
164 3pe7_A Oligogalacturonate lyas 99.9 2.2E-21 7.4E-26 182.6 27.3 283 196-501 23-370 (388)
165 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.8E-21 9.4E-26 179.9 26.5 284 173-471 4-342 (365)
166 3pe7_A Oligogalacturonate lyas 99.9 3.8E-22 1.3E-26 187.8 20.7 282 165-468 41-380 (388)
167 1jof_A Carboxy-CIS,CIS-muconat 99.9 5E-20 1.7E-24 171.4 28.0 277 134-427 14-342 (365)
168 1qks_A Cytochrome CD1 nitrite 99.9 4E-18 1.4E-22 165.4 40.4 334 123-479 165-547 (567)
169 3azo_A Aminopeptidase; POP fam 99.9 4.4E-20 1.5E-24 186.3 26.1 297 111-475 21-374 (662)
170 3c5m_A Oligogalacturonate lyas 99.9 1.1E-20 3.9E-25 178.2 19.4 287 160-474 36-388 (396)
171 3c5m_A Oligogalacturonate lyas 99.9 1.1E-20 3.9E-25 178.2 18.5 283 206-502 38-371 (396)
172 3azo_A Aminopeptidase; POP fam 99.8 1.3E-19 4.5E-24 182.8 20.1 292 71-377 23-365 (662)
173 2dg1_A DRP35, lactonase; beta 99.8 5.2E-18 1.8E-22 155.9 25.9 270 205-502 7-300 (333)
174 1q7f_A NHL, brain tumor CG1071 99.8 4.8E-17 1.6E-21 145.9 30.6 247 201-472 27-282 (286)
175 2z2n_A Virginiamycin B lyase; 99.8 2E-15 6.7E-20 136.3 40.3 286 157-472 12-297 (299)
176 2dg1_A DRP35, lactonase; beta 99.8 2.8E-17 9.6E-22 151.0 27.7 279 160-461 6-301 (333)
177 2gop_A Trilobed protease; beta 99.8 2.4E-17 8.1E-22 152.4 26.8 272 159-483 14-342 (347)
178 3fvz_A Peptidyl-glycine alpha- 99.8 4.6E-17 1.6E-21 149.0 28.1 245 114-379 24-322 (329)
179 2oiz_A Aromatic amine dehydrog 99.8 1.1E-17 3.8E-22 154.7 23.6 269 214-501 14-324 (361)
180 1q7f_A NHL, brain tumor CG1071 99.8 1.3E-16 4.3E-21 143.2 29.8 242 112-379 28-280 (286)
181 1qks_A Cytochrome CD1 nitrite 99.8 5E-16 1.7E-20 150.8 35.0 319 169-500 165-521 (567)
182 3dsm_A Uncharacterized protein 99.8 1.7E-16 5.8E-21 144.9 28.4 284 179-490 15-320 (328)
183 3fvz_A Peptidyl-glycine alpha- 99.8 1.5E-16 5E-21 145.6 27.1 242 244-503 22-313 (329)
184 2z2n_A Virginiamycin B lyase; 99.8 1.4E-14 4.8E-19 130.6 39.9 283 111-427 12-296 (299)
185 2gop_A Trilobed protease; beta 99.8 1.5E-16 5.2E-21 147.0 26.9 250 205-503 16-321 (347)
186 2xdw_A Prolyl endopeptidase; a 99.8 2.8E-16 9.5E-21 159.4 30.7 287 169-472 81-416 (710)
187 3e5z_A Putative gluconolactona 99.8 8.8E-16 3E-20 138.3 27.5 247 199-473 23-289 (296)
188 2bkl_A Prolyl endopeptidase; m 99.8 2.9E-16 1E-20 158.8 26.6 282 122-473 76-400 (695)
189 2mad_H Methylamine dehydrogena 99.7 1.5E-14 5E-19 133.7 35.4 279 135-477 48-357 (373)
190 2qc5_A Streptogramin B lactona 99.7 5.9E-14 2E-18 126.6 38.8 282 157-469 17-299 (300)
191 3e5z_A Putative gluconolactona 99.7 2.9E-15 9.9E-20 135.0 28.2 237 237-503 19-278 (296)
192 2xdw_A Prolyl endopeptidase; a 99.7 9.8E-16 3.4E-20 155.4 27.8 266 213-499 81-397 (710)
193 3sjl_D Methylamine dehydrogena 99.7 3.3E-15 1.1E-19 135.8 27.5 299 165-492 38-384 (386)
194 3dsm_A Uncharacterized protein 99.7 4.1E-15 1.4E-19 135.7 26.7 271 133-434 16-309 (328)
195 1rwi_B Serine/threonine-protei 99.7 8.6E-15 2.9E-19 129.9 27.8 239 115-380 25-265 (270)
196 1rwi_B Serine/threonine-protei 99.7 8.3E-15 2.8E-19 130.1 27.6 242 205-473 25-267 (270)
197 2qc5_A Streptogramin B lactona 99.7 3.4E-13 1.2E-17 121.5 38.3 281 111-425 17-299 (300)
198 3sjl_D Methylamine dehydrogena 99.7 1E-14 3.5E-19 132.6 25.9 300 120-450 39-384 (386)
199 2mad_H Methylamine dehydrogena 99.7 1.1E-13 3.7E-18 127.9 31.6 270 211-500 28-337 (373)
200 3no2_A Uncharacterized protein 99.7 3.5E-14 1.2E-18 125.6 26.8 220 214-500 4-231 (276)
201 2bkl_A Prolyl endopeptidase; m 99.7 4.6E-15 1.6E-19 150.0 24.0 265 212-499 76-380 (695)
202 3c75_H MADH, methylamine dehyd 99.7 1.5E-14 5.3E-19 134.0 24.2 281 134-477 99-409 (426)
203 3no2_A Uncharacterized protein 99.7 1.1E-13 3.6E-18 122.5 27.3 224 170-414 4-231 (276)
204 1yr2_A Prolyl oligopeptidase; 99.6 2.1E-14 7.3E-19 146.2 24.7 286 168-472 115-443 (741)
205 1yr2_A Prolyl oligopeptidase; 99.6 2.5E-14 8.5E-19 145.7 24.7 280 122-428 115-443 (741)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.8E-13 2E-17 120.9 28.2 249 202-470 16-299 (314)
207 3g4e_A Regucalcin; six bladed 99.6 1.3E-12 4.4E-17 117.4 28.8 234 242-501 9-261 (297)
208 1xip_A Nucleoporin NUP159; bet 99.6 3.2E-13 1.1E-17 123.4 24.4 186 115-320 39-231 (388)
209 3c75_H MADH, methylamine dehyd 99.6 1.3E-13 4.5E-18 127.8 21.2 269 213-501 82-390 (426)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1E-12 3.6E-17 119.2 25.8 240 73-333 19-299 (314)
211 3g4e_A Regucalcin; six bladed 99.6 6.9E-12 2.4E-16 112.6 28.8 235 205-459 14-261 (297)
212 3hrp_A Uncharacterized protein 99.5 5.6E-12 1.9E-16 118.2 28.4 247 205-468 132-408 (409)
213 1yiq_A Quinohemoprotein alcoho 99.5 2E-12 6.8E-17 129.4 24.8 356 124-498 70-534 (689)
214 3hrp_A Uncharacterized protein 99.5 5.3E-12 1.8E-16 118.4 26.2 247 160-424 131-408 (409)
215 4a2l_A BT_4663, two-component 99.5 4.7E-10 1.6E-14 115.2 42.7 401 71-499 87-515 (795)
216 1kb0_A Quinohemoprotein alcoho 99.5 1.9E-12 6.4E-17 129.3 24.1 320 171-498 77-536 (677)
217 2qe8_A Uncharacterized protein 99.5 3.7E-12 1.3E-16 117.0 24.3 264 204-501 17-310 (343)
218 2ghs_A AGR_C_1268P; regucalcin 99.5 4.4E-11 1.5E-15 108.8 29.9 225 247-501 50-291 (326)
219 4a2l_A BT_4663, two-component 99.5 9.5E-10 3.2E-14 113.0 42.0 357 116-499 175-560 (795)
220 3dr2_A Exported gluconolactona 99.5 1.4E-11 4.8E-16 111.1 25.0 235 238-503 37-298 (305)
221 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.6E-11 5.5E-16 114.4 26.2 303 170-504 52-370 (376)
222 3dr2_A Exported gluconolactona 99.5 1.5E-11 5E-16 111.0 24.8 242 199-467 40-303 (305)
223 3iuj_A Prolyl endopeptidase; h 99.5 4.7E-12 1.6E-16 127.7 23.3 244 111-380 126-406 (693)
224 1mda_H Methylamine dehydrogena 99.5 1.3E-12 4.6E-17 119.1 17.3 284 135-491 47-366 (368)
225 1xip_A Nucleoporin NUP159; bet 99.5 1.1E-12 3.6E-17 120.0 15.9 171 161-360 39-227 (388)
226 1mda_H Methylamine dehydrogena 99.5 4.3E-12 1.5E-16 115.8 19.9 244 226-500 47-333 (368)
227 2qe8_A Uncharacterized protein 99.5 4.8E-12 1.6E-16 116.2 20.4 274 160-466 17-317 (343)
228 3iuj_A Prolyl endopeptidase; h 99.5 7.7E-12 2.6E-16 126.1 23.6 246 158-430 127-409 (693)
229 2ece_A 462AA long hypothetical 99.5 1.7E-10 5.9E-15 105.5 29.7 231 169-414 93-399 (462)
230 2ghs_A AGR_C_1268P; regucalcin 99.5 2.5E-10 8.6E-15 103.8 31.1 231 206-460 51-292 (326)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.6E-10 5.6E-15 107.6 29.4 312 124-467 53-375 (376)
232 2ece_A 462AA long hypothetical 99.4 1E-10 3.6E-15 106.9 23.4 233 210-458 88-399 (462)
233 3v9f_A Two-component system se 99.4 3.2E-08 1.1E-12 101.4 42.6 407 72-499 66-512 (781)
234 1kb0_A Quinohemoprotein alcoho 99.3 1.9E-10 6.4E-15 115.0 24.3 272 170-456 127-536 (677)
235 3v9f_A Two-component system se 99.3 8.9E-08 3E-12 98.1 43.8 400 72-503 211-648 (781)
236 3hxj_A Pyrrolo-quinoline quino 99.3 1.6E-10 5.4E-15 105.6 19.7 301 118-470 24-324 (330)
237 2hz6_A Endoplasmic reticulum t 99.3 1.8E-12 6.3E-17 119.9 6.7 206 214-495 8-217 (369)
238 3hxj_A Pyrrolo-quinoline quino 99.3 3.3E-10 1.1E-14 103.4 19.0 291 165-503 25-315 (330)
239 1kv9_A Type II quinohemoprotei 99.2 1.4E-09 4.8E-14 108.5 23.9 321 171-499 66-519 (668)
240 1fwx_A Nitrous oxide reductase 99.2 7.4E-10 2.5E-14 105.1 19.2 243 213-473 99-434 (595)
241 1w6s_A Methanol dehydrogenase 99.2 6.6E-09 2.3E-13 101.3 26.2 319 171-495 62-529 (599)
242 2ad6_A Methanol dehydrogenase 99.2 1.1E-08 3.8E-13 99.9 27.6 320 171-498 62-523 (571)
243 1npe_A Nidogen, entactin; glyc 99.2 5.7E-08 1.9E-12 85.5 28.5 251 172-494 2-263 (267)
244 1flg_A Protein (quinoprotein e 99.2 3.5E-08 1.2E-12 96.4 28.9 319 173-497 70-544 (582)
245 1fwx_A Nitrous oxide reductase 99.2 6.7E-10 2.3E-14 105.4 15.9 255 170-432 100-437 (595)
246 2hz6_A Endoplasmic reticulum t 99.1 1.7E-11 6E-16 113.3 3.5 187 125-341 9-200 (369)
247 1yiq_A Quinohemoprotein alcoho 99.1 4.8E-09 1.6E-13 105.1 21.2 273 215-504 70-497 (689)
248 2p4o_A Hypothetical protein; p 99.1 1.7E-07 5.8E-12 84.2 28.1 235 204-461 32-279 (306)
249 3s94_A LRP-6, low-density lipo 99.1 1E-05 3.5E-10 79.6 42.7 414 70-500 38-497 (619)
250 2p4o_A Hypothetical protein; p 99.1 1.5E-07 5.2E-12 84.5 27.3 243 235-502 22-278 (306)
251 3nol_A Glutamine cyclotransfer 99.1 1.7E-08 5.7E-13 85.7 19.0 193 236-501 32-244 (262)
252 2fp8_A Strictosidine synthase; 99.1 1.9E-07 6.7E-12 84.6 27.6 244 205-470 20-313 (322)
253 1npe_A Nidogen, entactin; glyc 99.1 1.6E-07 5.5E-12 82.6 26.3 231 125-380 1-239 (267)
254 1k3i_A Galactose oxidase precu 99.1 1.5E-08 5.2E-13 101.3 22.1 277 208-501 190-530 (656)
255 2fp8_A Strictosidine synthase; 99.1 9.1E-08 3.1E-12 86.8 25.3 242 160-426 19-313 (322)
256 2iwa_A Glutamine cyclotransfer 99.0 8.4E-08 2.9E-12 82.6 22.4 217 104-334 9-238 (266)
257 2iwa_A Glutamine cyclotransfer 99.0 1.3E-07 4.4E-12 81.4 23.4 200 161-380 22-238 (266)
258 1kv9_A Type II quinohemoprotei 99.0 3.8E-08 1.3E-12 98.2 21.7 274 171-458 117-520 (668)
259 1k3i_A Galactose oxidase precu 99.0 1.6E-07 5.5E-12 93.9 26.1 281 164-459 190-530 (656)
260 3nol_A Glutamine cyclotransfer 98.9 3.2E-07 1.1E-11 77.9 20.9 202 105-323 32-245 (262)
261 1w6s_A Methanol dehydrogenase 98.9 2.2E-07 7.6E-12 90.6 22.6 278 165-457 111-534 (599)
262 3nok_A Glutaminyl cyclase; bet 98.9 7.6E-08 2.6E-12 81.6 16.6 184 303-501 55-254 (268)
263 2ad6_A Methanol dehydrogenase 98.9 5.4E-07 1.8E-11 88.0 25.1 271 170-455 114-522 (571)
264 3s94_A LRP-6, low-density lipo 98.9 9.4E-05 3.2E-09 72.8 40.4 369 72-472 84-512 (619)
265 3nok_A Glutaminyl cyclase; bet 98.8 1.8E-06 6.2E-11 73.3 22.0 204 103-322 42-254 (268)
266 2xe4_A Oligopeptidase B; hydro 98.8 1.8E-06 6.2E-11 87.6 26.4 155 115-276 175-354 (751)
267 1ijq_A LDL receptor, low-densi 98.8 1.9E-05 6.5E-10 71.0 29.4 236 217-478 3-246 (316)
268 1flg_A Protein (quinoprotein e 98.8 1.1E-05 3.7E-10 78.9 29.7 272 171-455 117-544 (582)
269 3p5b_L Low density lipoprotein 98.8 3.8E-05 1.3E-09 71.4 31.2 252 217-489 85-339 (400)
270 3mbr_X Glutamine cyclotransfer 98.8 6.8E-07 2.3E-11 75.2 17.4 186 302-501 20-223 (243)
271 4a0p_A LRP6, LRP-6, low-densit 98.8 0.00023 7.9E-09 70.1 46.9 413 71-500 36-495 (628)
272 3mbr_X Glutamine cyclotransfer 98.7 4.1E-06 1.4E-10 70.5 21.7 202 105-322 10-223 (243)
273 4hw6_A Hypothetical protein, I 98.7 1.5E-05 5E-10 75.0 27.5 246 206-469 141-432 (433)
274 3v64_C Agrin; beta propeller, 98.7 6.8E-05 2.3E-09 68.3 31.2 253 208-489 38-294 (349)
275 2xbg_A YCF48-like protein; pho 98.7 0.00014 4.9E-09 65.6 33.7 282 113-424 35-320 (327)
276 1ijq_A LDL receptor, low-densi 98.7 7.3E-05 2.5E-09 67.2 30.9 229 127-380 3-239 (316)
277 2xe4_A Oligopeptidase B; hydro 98.7 3.3E-06 1.1E-10 85.7 23.7 249 205-473 175-461 (751)
278 3tc9_A Hypothetical hydrolase; 98.7 1.2E-05 4E-10 75.7 25.5 245 206-469 139-429 (430)
279 3tc9_A Hypothetical hydrolase; 98.7 4.9E-06 1.7E-10 78.2 22.8 245 160-425 137-429 (430)
280 3qqz_A Putative uncharacterize 98.7 4.1E-05 1.4E-09 65.5 26.0 208 111-331 24-251 (255)
281 3v65_B Low-density lipoprotein 98.6 4E-05 1.4E-09 71.0 27.1 253 208-489 81-337 (386)
282 4hw6_A Hypothetical protein, I 98.6 1.4E-05 4.7E-10 75.1 24.0 243 160-425 139-432 (433)
283 3v64_C Agrin; beta propeller, 98.6 0.00017 6E-09 65.6 30.6 241 163-432 37-281 (349)
284 3p5b_L Low density lipoprotein 98.6 0.00012 4.2E-09 68.0 29.9 231 126-380 84-321 (400)
285 2xbg_A YCF48-like protein; pho 98.6 0.00025 8.6E-09 64.0 30.6 276 71-376 35-319 (327)
286 3v65_B Low-density lipoprotein 98.5 9.1E-05 3.1E-09 68.6 26.9 241 164-433 81-325 (386)
287 3ei3_A DNA damage-binding prot 98.5 0.0017 6E-08 68.4 39.5 361 110-503 550-990 (1158)
288 3qqz_A Putative uncharacterize 98.5 0.0002 6.7E-09 61.2 26.5 210 240-468 21-251 (255)
289 3ei3_A DNA damage-binding prot 98.5 0.0008 2.8E-08 71.0 35.4 327 114-475 514-918 (1158)
290 3sov_A LRP-6, low-density lipo 98.5 9.1E-05 3.1E-09 66.4 24.5 230 224-478 12-246 (318)
291 3sov_A LRP-6, low-density lipo 98.5 0.00026 9E-09 63.4 26.7 230 127-381 6-240 (318)
292 1n7d_A LDL receptor, low-densi 98.4 5.1E-06 1.7E-10 83.2 16.5 248 223-490 384-634 (699)
293 3m0c_C LDL receptor, low-densi 98.4 0.00038 1.3E-08 70.2 29.0 241 217-479 397-641 (791)
294 3kya_A Putative phosphatase; s 98.4 0.0005 1.7E-08 64.7 27.9 258 205-475 140-480 (496)
295 2xzh_A Clathrin heavy chain 1; 98.4 0.0009 3.1E-08 58.3 31.8 267 179-471 47-333 (365)
296 3amr_A 3-phytase; beta-propell 98.4 0.00014 4.8E-09 64.6 22.3 204 256-478 39-272 (355)
297 4a0p_A LRP6, LRP-6, low-densit 98.4 0.0025 8.6E-08 62.8 44.9 353 114-496 37-446 (628)
298 2p9w_A MAL S 1 allergenic prot 98.3 0.00021 7.3E-09 62.8 22.3 214 244-470 11-265 (334)
299 3m0c_C LDL receptor, low-densi 98.3 0.0011 3.7E-08 66.9 29.3 230 127-380 397-633 (791)
300 2ism_A Putative oxidoreductase 98.3 0.00077 2.6E-08 61.4 25.4 239 160-414 31-333 (352)
301 2p9w_A MAL S 1 allergenic prot 98.2 0.00065 2.2E-08 59.8 23.0 167 157-334 10-216 (334)
302 3ott_A Two-component system se 98.2 0.0069 2.3E-07 61.7 39.9 355 113-498 145-533 (758)
303 1bpo_A Protein (clathrin); cla 98.2 0.0032 1.1E-07 57.2 33.7 267 179-471 46-332 (494)
304 3kya_A Putative phosphatase; s 98.2 0.00063 2.2E-08 64.1 23.7 259 161-427 140-476 (496)
305 3amr_A 3-phytase; beta-propell 98.2 0.0015 5E-08 58.1 24.5 185 127-332 43-262 (355)
306 2ism_A Putative oxidoreductase 98.1 0.0042 1.4E-07 56.5 27.9 241 205-458 32-333 (352)
307 3a9g_A Putative uncharacterize 98.1 0.0022 7.7E-08 58.3 25.5 239 160-414 29-330 (354)
308 3ott_A Two-component system se 98.1 0.011 3.9E-07 60.1 43.9 385 71-497 21-434 (758)
309 2vpj_A Kelch-like protein 12; 98.1 0.00065 2.2E-08 60.5 20.6 107 170-280 14-141 (301)
310 1n7d_A LDL receptor, low-densi 98.1 5.4E-05 1.8E-09 75.8 14.7 227 180-431 385-619 (699)
311 1cru_A Protein (soluble quinop 98.0 0.0093 3.2E-07 56.2 31.1 106 160-265 27-163 (454)
312 3a9g_A Putative uncharacterize 98.0 0.0077 2.6E-07 54.7 29.4 243 204-458 29-330 (354)
313 2xn4_A Kelch-like protein 2; s 98.0 0.0012 4.2E-08 58.7 21.4 106 171-280 16-137 (302)
314 3ii7_A Kelch-like protein 7; p 98.0 0.0023 8E-08 57.0 23.0 232 172-431 13-277 (306)
315 2vpj_A Kelch-like protein 12; 98.0 0.0036 1.2E-07 55.6 23.7 187 170-379 62-278 (301)
316 3ii7_A Kelch-like protein 7; p 98.0 0.0067 2.3E-07 54.0 25.4 228 217-472 14-274 (306)
317 1zgk_A Kelch-like ECH-associat 98.0 0.0026 8.9E-08 56.7 22.6 233 170-430 24-291 (308)
318 3sre_A PON1, serum paraoxonase 97.9 0.0016 5.5E-08 58.7 20.4 192 304-502 51-287 (355)
319 2g8s_A Glucose/sorbosone dehyd 97.9 0.0058 2E-07 55.6 24.4 245 205-457 19-340 (353)
320 2xn4_A Kelch-like protein 2; s 97.9 0.0053 1.8E-07 54.5 22.5 152 170-340 61-236 (302)
321 2xzh_A Clathrin heavy chain 1; 97.8 0.013 4.3E-07 51.2 25.5 231 225-486 49-306 (365)
322 1zgk_A Kelch-like ECH-associat 97.8 0.0058 2E-07 54.5 22.4 193 124-340 24-247 (308)
323 3sre_A PON1, serum paraoxonase 97.8 0.016 5.5E-07 52.2 25.8 195 118-331 54-296 (355)
324 4asc_A Kelch repeat and BTB do 97.8 0.0055 1.9E-07 54.8 21.8 103 173-280 7-130 (315)
325 2g8s_A Glucose/sorbosone dehyd 97.8 0.0094 3.2E-07 54.2 23.1 253 115-371 19-346 (353)
326 3das_A Putative oxidoreductase 97.7 0.03 1E-06 50.2 25.3 242 114-359 32-320 (347)
327 4asc_A Kelch repeat and BTB do 97.6 0.016 5.5E-07 51.7 21.9 190 128-341 8-229 (315)
328 2woz_A Kelch repeat and BTB do 97.6 0.015 5.1E-07 52.0 21.3 103 173-280 18-140 (318)
329 2uvk_A YJHT; unknown function, 97.5 0.0038 1.3E-07 57.0 17.0 95 170-266 19-128 (357)
330 3s25_A Hypothetical 7-bladed b 97.5 0.048 1.6E-06 48.1 22.9 209 123-379 23-255 (302)
331 3pbp_A Nucleoporin NUP82; beta 97.5 0.027 9.2E-07 51.2 20.3 148 121-273 28-209 (452)
332 1xi4_A Clathrin heavy chain; a 97.4 0.029 9.9E-07 59.1 22.6 266 179-470 46-331 (1630)
333 2woz_A Kelch repeat and BTB do 97.4 0.068 2.3E-06 47.7 23.7 191 127-341 18-239 (318)
334 2uvk_A YJHT; unknown function, 97.4 0.025 8.4E-07 51.6 20.0 96 124-224 19-128 (357)
335 3s25_A Hypothetical 7-bladed b 97.3 0.078 2.7E-06 46.7 24.8 214 167-428 21-257 (302)
336 3pbp_A Nucleoporin NUP82; beta 97.3 0.066 2.3E-06 48.8 20.8 154 309-466 27-208 (452)
337 3das_A Putative oxidoreductase 97.1 0.15 5.1E-06 45.7 29.7 249 240-500 26-326 (347)
338 2be1_A Serine/threonine-protei 97.1 0.0059 2E-07 54.5 12.0 116 216-342 11-139 (339)
339 1tl2_A L10, protein (tachylect 97.1 0.05 1.7E-06 44.6 16.0 156 246-419 41-203 (236)
340 1tl2_A L10, protein (tachylect 97.0 0.02 6.9E-07 46.9 13.2 147 71-225 40-201 (236)
341 2zwa_A Leucine carboxyl methyl 96.9 0.039 1.3E-06 55.2 17.8 234 255-501 396-674 (695)
342 1bpo_A Protein (clathrin); cla 96.9 0.24 8.1E-06 45.3 29.3 204 120-342 72-298 (494)
343 2zwa_A Leucine carboxyl methyl 96.9 0.1 3.5E-06 52.3 20.2 156 169-335 396-579 (695)
344 3sbq_A Nitrous-oxide reductase 96.8 0.39 1.3E-05 45.4 24.8 256 170-433 141-485 (638)
345 3sbq_A Nitrous-oxide reductase 96.7 0.41 1.4E-05 45.2 26.1 101 398-500 325-453 (638)
346 1xi4_A Clathrin heavy chain; a 96.5 0.34 1.2E-05 51.4 20.7 224 224-476 47-295 (1630)
347 1cru_A Protein (soluble quinop 96.5 0.6 2E-05 43.9 32.3 110 204-321 27-162 (454)
348 2be1_A Serine/threonine-protei 95.7 0.42 1.4E-05 42.6 15.4 113 172-286 11-139 (339)
349 2wg3_C Hedgehog-interacting pr 95.5 1.7 5.7E-05 40.8 27.1 110 115-224 15-159 (463)
350 3b7f_A Glycosyl hydrolase, BNR 95.1 2 6.9E-05 39.4 31.8 306 172-490 23-391 (394)
351 3uc1_A DNA gyrase subunit A; D 94.5 2.4 8.3E-05 37.6 22.7 275 216-503 4-321 (327)
352 2wg3_C Hedgehog-interacting pr 94.4 3.3 0.00011 38.8 26.8 52 205-256 15-79 (463)
353 4hvt_A Ritya.17583.B, post-pro 94.0 5.5 0.00019 39.7 22.5 241 207-469 132-429 (711)
354 4hvt_A Ritya.17583.B, post-pro 92.5 9.4 0.00032 38.1 21.4 229 249-497 132-411 (711)
355 3q6k_A 43.2 kDa salivary prote 91.1 8.5 0.00029 34.8 21.7 184 226-413 124-341 (381)
356 3b7f_A Glycosyl hydrolase, BNR 90.2 11 0.00037 34.4 25.9 158 113-273 54-259 (394)
357 3q6k_A 43.2 kDa salivary prote 88.7 14 0.00046 33.5 21.4 155 303-458 152-342 (381)
358 4gq2_M Nucleoporin NUP120; bet 88.0 24 0.00083 36.6 17.7 39 440-478 236-274 (950)
359 3l6v_A GYRA, DNA gyrase subuni 86.4 18 0.00063 32.6 24.2 207 254-470 4-265 (370)
360 3uc1_A DNA gyrase subunit A; D 83.4 23 0.0008 31.2 25.4 167 159-332 41-227 (327)
361 3qhy_B Beta-lactamase inhibito 83.4 21 0.00072 30.7 23.6 222 115-380 25-247 (282)
362 1zi0_A DNA gyrase subunit A; b 82.9 23 0.0008 30.9 27.9 246 213-470 1-277 (307)
363 3l6v_A GYRA, DNA gyrase subuni 80.6 32 0.0011 31.0 27.9 245 212-468 4-314 (370)
364 1wp5_A Topoisomerase IV; broke 80.4 30 0.001 30.5 23.3 163 112-276 38-225 (323)
365 3no0_A DNA gyrase subunit A; D 80.2 27 0.00093 29.9 23.4 199 117-332 28-245 (276)
366 1suu_A DNA gyrase subunit A; t 77.3 37 0.0012 29.7 28.2 204 213-425 6-230 (312)
367 3kci_A Probable E3 ubiquitin-p 77.1 43 0.0015 30.4 28.5 242 171-426 62-345 (389)
368 3zwu_A Alkaline phosphatase PH 75.8 10 0.00035 36.6 8.7 58 442-499 478-548 (592)
369 4a9v_A PHOX; hydrolase, beta-p 73.3 18 0.00063 34.5 9.5 61 440-500 476-549 (592)
370 4fhn_B Nucleoporin NUP120; pro 72.9 7.4 0.00025 41.5 7.7 38 441-478 239-276 (1139)
371 4fhn_B Nucleoporin NUP120; pro 72.8 33 0.0011 36.6 12.5 37 206-242 240-276 (1139)
372 3no0_A DNA gyrase subunit A; D 72.7 45 0.0015 28.5 21.7 161 303-469 24-195 (276)
373 2cn3_A Xyloglucanase, beta-1,4 72.4 83 0.0028 31.5 30.9 105 115-223 24-152 (737)
374 1suu_A DNA gyrase subunit A; t 72.0 50 0.0017 28.8 27.8 201 123-333 6-231 (312)
375 3qhy_B Beta-lactamase inhibito 69.8 52 0.0018 28.2 26.7 224 160-428 24-248 (282)
376 3f7f_A Nucleoporin NUP120; nuc 62.6 1.3E+02 0.0043 29.9 18.1 37 441-479 223-259 (729)
377 3zwu_A Alkaline phosphatase PH 61.2 35 0.0012 33.0 9.0 60 247-320 477-548 (592)
378 1zi0_A DNA gyrase subunit A; b 59.2 90 0.0031 27.1 29.5 199 124-332 2-225 (307)
379 4a9v_A PHOX; hydrolase, beta-p 58.1 57 0.002 31.3 9.5 62 246-321 476-549 (592)
380 1wp5_A Topoisomerase IV; broke 57.7 99 0.0034 27.1 26.5 249 213-470 3-277 (323)
381 4gq2_M Nucleoporin NUP120; bet 53.9 2.1E+02 0.0071 29.7 24.1 37 303-339 236-272 (950)
382 3kci_A Probable E3 ubiquitin-p 51.4 1.4E+02 0.0047 26.9 27.0 209 115-333 106-345 (389)
383 3f7f_A Nucleoporin NUP120; nuc 50.0 28 0.00096 34.4 6.3 37 205-243 223-259 (729)
384 1q47_A Semaphorin 3A; beta pro 33.8 1.2E+02 0.0042 28.5 7.7 73 349-421 406-487 (495)
385 1sqj_A OXG-RCBH, oligoxylogluc 33.5 3.9E+02 0.013 26.9 36.2 62 161-224 122-190 (789)
386 1q47_A Semaphorin 3A; beta pro 31.4 1.5E+02 0.0051 27.9 7.9 69 397-465 405-487 (495)
387 1zvu_A Topoisomerase IV subuni 30.9 4E+02 0.014 26.3 13.7 77 393-470 551-633 (716)
388 3al9_A Plexin-A2; beta-propell 30.5 53 0.0018 31.4 4.8 74 348-421 401-476 (539)
389 3ol2_B Plexin-B1; beta-propell 29.4 1.4E+02 0.0047 28.4 7.3 73 348-421 388-461 (528)
390 2zux_A YESW protein; beta-prop 28.8 4E+02 0.014 25.6 21.6 41 393-433 361-407 (591)
391 4gz8_A Semaphorin-3A; multi-do 24.9 2.5E+02 0.0084 27.7 8.3 66 356-421 425-495 (667)
392 3al9_A Plexin-A2; beta-propell 24.2 1.1E+02 0.0036 29.3 5.6 69 397-465 401-476 (539)
393 4gz8_A Semaphorin-3A; multi-do 23.4 1.8E+02 0.0062 28.6 7.1 68 398-465 414-495 (667)
394 3nvq_A Semaphorin-7A; beta-pro 20.2 2.7E+02 0.0093 26.8 7.4 69 397-465 363-444 (590)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-58 Score=462.51 Aligned_cols=445 Identities=16% Similarity=0.200 Sum_probs=350.5
Q ss_pred CCCCCccccCCCcCcccCCC--------------CCccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCcc-ccc
Q psy17188 42 YPRPPLVGYDPHSQMRAPLG--------------PASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRH-ARQ 106 (504)
Q Consensus 42 ~~~~~~~~~~p~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~-~~~ 106 (504)
.|.+-.++|+|+++.++... ...+.+| ...|.+++|+|+|+.++.+..++.+.+|+.... ...
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h--~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~ 95 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEH--SHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 95 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCC--SSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred cCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCC--CCceEEEEECCCCcEEEEEeCCCCEEEeECCCCccee
Confidence 45566788999987653221 2234455 567999999999999999999999999987543 333
Q ss_pred eeee-cCCCcEEEEEEcCCCcEEEEec-C----CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC-EEEEecC
Q psy17188 107 INTL-SHGEVVCAVTISNPTKYVYTGG-K----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGE 179 (504)
Q Consensus 107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~ 179 (504)
...+ +|.+.|.+++|+|++++|++++ + +.|++||... .. . .+.+|...|++++|+|++. .|++++.
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~~---~--~l~gh~~~v~~v~f~p~~~~~l~s~s~ 168 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--SN---G--NLTGQARAMNSVDFKPSRPFRIISGSD 168 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--BC---B--CCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--Cc---c--eecCCCCCceEEEECCCCCeEEEEEeC
Confidence 3444 8999999999999999999876 3 3688887432 22 2 2338999999999999987 5999999
Q ss_pred CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEE
Q psy17188 180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCID 252 (504)
Q Consensus 180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~ 252 (504)
|++|++||..+.+ ....+.+|...|.+++|+|++++|++++.|++|++||+.+++.+..+. +|.+.|.+++
T Consensus 169 D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~ 246 (611)
T 1nr0_A 169 DNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 246 (611)
T ss_dssp TSCEEEEETTTBE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred CCeEEEEECCCCe--EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEE
Confidence 9999999987543 466788999999999999999999999999999999999999888884 7999999999
Q ss_pred EccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCC---------------------------CCCcccceecccCCc
Q psy17188 253 ISADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGS---------------------------KTPVSQLDCLQRDNY 304 (504)
Q Consensus 253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~---------------------------~~~~~~~~~~~~~~~ 304 (504)
|+|++++|++++.|++|++||+++++... +....... ...........|...
T Consensus 247 ~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 247 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence 99999999999999999999999876421 11000000 000011223468889
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee--------------------------------------------
Q psy17188 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-------------------------------------------- 340 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------------------------------------------- 340 (504)
|.+++|+|++++|++++.|+.|++||+.++......
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 999999999999999999999999998765321100
Q ss_pred --e----------------------------------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188 341 --E----------------------------------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384 (504)
Q Consensus 341 --~----------------------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 384 (504)
. ...+...+.+++|+|+++ ++++++.|+.|++||+....
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~--~lasgs~D~~v~lwd~~~~~--- 481 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ--FVAVGGQDSKVHVYKLSGAS--- 481 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC--EEEEEETTSEEEEEEEETTE---
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC--EEEEeCCCCeEEEEEccCCc---
Confidence 0 000223467889999998 89999999999999987532
Q ss_pred cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 463 (504)
Q Consensus 385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i 463 (504)
........|...|.+++|+|||++|++++.|++|++|++.+ ++.........|...|++++|+||+++|++++.|++|
T Consensus 482 -~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 482 -VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp -EEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred -eeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence 11112246888999999999999999999999999999986 3322221234588999999999999999999999999
Q ss_pred EEEEcCCcc-eE-EEEeec-CCceEEEEEccCCCEEEEecCCCC
Q psy17188 464 AVWDLHNQT-LV-RQFQGH-TDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 464 ~iwd~~~~~-~~-~~~~~h-~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
++||+.+++ .+ ..+.+| ...|++++|+||++ |+++|.||+
T Consensus 561 ~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~ 603 (611)
T 1nr0_A 561 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSN 603 (611)
T ss_dssp EEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSC
T ss_pred EEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCC
Confidence 999998875 33 566789 89999999999998 999999986
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.5e-58 Score=459.71 Aligned_cols=414 Identities=18% Similarity=0.249 Sum_probs=334.1
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT 148 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~ 148 (504)
.+.+..++|+|||+.++.+. ++.+.+|+... .+....+ +|.+.|++++|+|+|++||+++ |++|+|||+.++...
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~-~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~- 94 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI- 94 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTC-SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCC-cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-
Confidence 45688899999999888776 45777776643 3444555 9999999999999999999999 999999998754321
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC-EEEEEeC
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCS 223 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~ 223 (504)
.......|.+.|.+++|+|++++|++++.+ +.|++||.. + ....+.+|...|.+++|+|++. .|++++.
T Consensus 95 --~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~--~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~ 168 (611)
T 1nr0_A 95 --LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--T--SNGNLTGQARAMNSVDFKPSRPFRIISGSD 168 (611)
T ss_dssp --EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--C--BCBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred --eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--C--CcceecCCCCCceEEEECCCCCeEEEEEeC
Confidence 222334789999999999999999998765 478888853 3 2456789999999999999987 6999999
Q ss_pred CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
|++|++||..+++++..+.+|...|.+++|+|++++|++++.|++|++||+.+++.... +.. .......|..
T Consensus 169 D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~-~~~-------~~~~~~~h~~ 240 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV-FED-------DSLKNVAHSG 240 (611)
T ss_dssp TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE-CBC-------TTSSSCSSSS
T ss_pred CCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee-ecc-------ccccccccCC
Confidence 99999999999999999999999999999999999999999999999999988864211 000 0111226888
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc-----------------------------------------eeee
Q psy17188 304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI-----------------------------------------KAEL 342 (504)
Q Consensus 304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-----------------------------------------~~~~ 342 (504)
.|.+++|+|++++|++++.|++|++||+++++... ...+
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence 99999999999999999999999999998754221 1234
Q ss_pred ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc--------c--------------------------
Q psy17188 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS--------Q-------------------------- 388 (504)
Q Consensus 343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--------~-------------------------- 388 (504)
.+|...|.+++|+|+++ ++++++.|+.|++||+..+....... .
T Consensus 321 ~gh~~~v~~l~~spdg~--~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 321 YGHNKAITALSSSADGK--TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGS 398 (611)
T ss_dssp CCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSS
T ss_pred cCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCc
Confidence 56888999999999998 89999999999999987542110000 0
Q ss_pred -------------------------------------------cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 389 -------------------------------------------LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 389 -------------------------------------------~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
.....+...+.+++|+|||++|++|+.|+.|++||+.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~ 478 (611)
T 1nr0_A 399 GVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLS 478 (611)
T ss_dssp SSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEE
T ss_pred cccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEcc
Confidence 0000123457899999999999999999999999998
Q ss_pred CCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC-cceEEE--EeecCCceEEEEEccCCCEEEEecCC
Q psy17188 426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD 502 (504)
Q Consensus 426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~--~~~h~~~v~~~~~s~d~~~l~s~s~D 502 (504)
++....... ..|...|++++|+||+++|++++.|++|++|++.+ ++++.. +.+|...|++++|+|||++|++||.|
T Consensus 479 ~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D 557 (611)
T 1nr0_A 479 GASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 557 (611)
T ss_dssp TTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECC
Confidence 654322233 56888999999999999999999999999999987 665543 34599999999999999999999999
Q ss_pred CC
Q psy17188 503 NT 504 (504)
Q Consensus 503 gt 504 (504)
++
T Consensus 558 ~~ 559 (611)
T 1nr0_A 558 NS 559 (611)
T ss_dssp SC
T ss_pred Cc
Confidence 86
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.1e-53 Score=421.34 Aligned_cols=391 Identities=20% Similarity=0.402 Sum_probs=337.3
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT 148 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~ 148 (504)
...+..+.++|+|+.++.+..++.+.+|+. ..+.+..+ +|...|.+++|+|++++|++++ |+.|++||... .
T Consensus 180 ~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~--~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~----~ 253 (577)
T 2ymu_A 180 SSSVWGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----Q 253 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT--TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS----C
T ss_pred CcceeeeeecCCCCEEEEEcCCCEEEEEeC--CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC----C
Confidence 567889999999999988888888888874 34555666 8999999999999999999888 99999999643 2
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 228 (504)
.+. ...+|...|.+++|+|++++|++++.|+.|++|+... .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 254 ~~~--~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 254 LLQ--TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp EEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEE--EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEE
Confidence 222 2347899999999999999999999999999999753 23566788999999999999999999999999999
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188 229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 308 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 308 (504)
+||+... .+..+.+|...|.+++|+|++++|++++.|+.|++||..... ......|...|.++
T Consensus 329 ~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~----------------~~~~~~~~~~v~~~ 391 (577)
T 2ymu_A 329 LWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL----------------LQTLTGHSSSVRGV 391 (577)
T ss_dssp EEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCE----------------EEEEECCSSCEEEE
T ss_pred EEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCE----------------EEEecCCCCCeEEE
Confidence 9997654 556788899999999999999999999999999999965433 22334677889999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188 309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ 388 (504)
Q Consensus 309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 388 (504)
+|+|++++|++++.|+.|++||... .....+..|...+.+++|+|+++ ++++++.|+.|++||.... ..
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~--~l~~~~~d~~v~~w~~~~~------~~ 460 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQ--TIASASDDKTVKLWNRNGQ------LL 460 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTSC------EE
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCC--EEEEEcCCCEEEEEECCCC------EE
Confidence 9999999999999999999999643 45566778899999999999998 8999999999999996431 12
Q ss_pred cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
.....|...|.+++|+|++++|++++.|+.|++||.. ++ ....+.+|...|++++|+||+++|++++.||.|++||.
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC--EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 2334678899999999999999999999999999964 33 34456788899999999999999999999999999995
Q ss_pred CCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 469 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 469 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+++++..+.+|.+.|++++|+||+++|+|+|.||+
T Consensus 538 -~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 538 -NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred -CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 68889999999999999999999999999999986
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.2e-52 Score=416.03 Aligned_cols=399 Identities=20% Similarity=0.385 Sum_probs=340.2
Q ss_pred ccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeC
Q psy17188 64 SLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDI 141 (504)
Q Consensus 64 ~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~ 141 (504)
.|.|| ...|.+++|+|||+.++.+..+..+.+|+. ..+.+.++ +|.+.|++++|+|++++|++++ |++|+|||+
T Consensus 11 ~L~GH--~~~V~~~a~spdg~~las~~~d~~v~iWd~--~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 11 RLEAH--SSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp EECCC--SSCEEEEEECTTSSCEEEEETTSEEEEECT--TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EECCC--CCcEEEEEECCCCCEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 36678 778999999999999999988888988984 45666777 8999999999999999999998 999999996
Q ss_pred CCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc----------------------------
Q psy17188 142 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP---------------------------- 193 (504)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~---------------------------- 193 (504)
.. ..+. ...+|...|.+++|+|++++|++++.|+.+++|+......
T Consensus 87 ~~----~~~~--~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (577)
T 2ymu_A 87 NG----QLLQ--TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 160 (577)
T ss_dssp TS----CEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CC----CEEE--EEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccc
Confidence 43 2233 3347899999999999999999999999999999653210
Q ss_pred ----------cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188 194 ----------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG 263 (504)
Q Consensus 194 ----------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 263 (504)
........|...|.++.|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 239 (577)
T 2ymu_A 161 KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 239 (577)
T ss_dssp SEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred cceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEE
Confidence 012233456778899999999999999999999999995 677888899999999999999999999999
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.|+.|++||..... ......|...|.+++|+|+++.|++++.|+.+++||... .....+.
T Consensus 240 ~~d~~i~~w~~~~~~----------------~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~ 300 (577)
T 2ymu_A 240 SDDKTVKLWNRNGQL----------------LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLT 300 (577)
T ss_dssp ETTSCEEEECTTSCE----------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEEC
T ss_pred eCCCEEEEEeCCCCE----------------EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEe
Confidence 999999999976543 223346778899999999999999999999999999654 3455677
Q ss_pred cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 423 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd 423 (504)
.|...+.+++++|+++ .+++++.|+.|++||..... ......+...+.+++|+|++++|++++.|+.|++||
T Consensus 301 ~h~~~v~~~~~~~~~~--~l~t~~~d~~i~~w~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNRNGQH------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTSCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCeEEEEECCCCC--EEEEEeCCCeEEEEeCCCCe------eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 8889999999999998 79999999999999976431 122345778899999999999999999999999999
Q ss_pred CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
... + ....+..|...|++++|+||+++|++++.|+.|++||. +++.+..+.+|...|++++|+||+++|++++.|+
T Consensus 373 ~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 448 (577)
T 2ymu_A 373 RNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK 448 (577)
T ss_dssp TTC-C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCC-C--EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC
Confidence 643 2 34456678889999999999999999999999999995 6788889999999999999999999999999997
Q ss_pred C
Q psy17188 504 T 504 (504)
Q Consensus 504 t 504 (504)
+
T Consensus 449 ~ 449 (577)
T 2ymu_A 449 T 449 (577)
T ss_dssp E
T ss_pred E
Confidence 4
No 5
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-50 Score=417.91 Aligned_cols=422 Identities=11% Similarity=0.108 Sum_probs=319.7
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCc
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTP 149 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~ 149 (504)
...|.+++|+|+|+.++.+..++.+.+|+... .+....+.|...|.+++|+| +++|++++ |++|+|||+++++ .
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~-~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~---~ 91 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ-VEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK---V 91 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTT-CEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS---E
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC-cEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc---E
Confidence 56799999999999999999999999987653 34455568999999999999 88888887 9999999998753 2
Q ss_pred eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccce---------eeeecCcCceEEEEECCC-CCEEE
Q psy17188 150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK---------AELTSSAPACYALAISPD-SKVCF 219 (504)
Q Consensus 150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~---------~~~~~~~~~v~~~~~s~~-~~~l~ 219 (504)
+..+ .|...|++++|+|++++|++|+.||.|++||+++++.... ..+.+|...|.+++|+|+ +..|+
T Consensus 92 ~~~~---~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 92 LTTV---FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp EEEE---ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred EEEE---cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 2322 3668899999999999999999999999999987653210 234678899999999996 46899
Q ss_pred EEeCCCcEEEEECCCCeEEEeecCC------------------CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEE
Q psy17188 220 SCCSDGNIAVWDLHNQTLVRQFQGH------------------TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV 281 (504)
Q Consensus 220 ~~~~dg~i~iwd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~ 281 (504)
+++.|+.| +||+++++.+..+..| ...|.+++|+|++++|++++.||+|++||+++++...
T Consensus 169 ~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 169 ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 99999999 9999999998888766 4779999999999999999999999999998876532
Q ss_pred E-eec-----CCC---------CCCC-------------------------------cccce------------------
Q psy17188 282 W-DIS-----QPG---------SKTP-------------------------------VSQLD------------------ 297 (504)
Q Consensus 282 ~-~~~-----~~~---------~~~~-------------------------------~~~~~------------------ 297 (504)
. .+. .+. .... +..+.
T Consensus 248 ~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~ 327 (902)
T 2oaj_A 248 ARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNY 327 (902)
T ss_dssp EECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHH
T ss_pred EEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhh
Confidence 1 110 000 0000 00000
Q ss_pred --------e--cccCCceEEEEEcC----------CCCEEEEEeCCCcEEEEeCCCCCccce-----ee-----------
Q psy17188 298 --------C--LQRDNYIRSVKLLP----------DGRTLIVGGEASNLSIWDLASPTPRIK-----AE----------- 341 (504)
Q Consensus 298 --------~--~~~~~~v~~~~~~~----------~~~~l~~~~~dg~i~v~d~~~~~~~~~-----~~----------- 341 (504)
. ..+...+.++.+.+ +...+++++.|+.|++||+.++..... ..
T Consensus 328 ~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~ 407 (902)
T 2oaj_A 328 YANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTS 407 (902)
T ss_dssp HHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEE
T ss_pred hcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEE
Confidence 0 01133344555543 233677777888888888765421110 01
Q ss_pred -----------------------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-cccccc-----c
Q psy17188 342 -----------------------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-VSQLDC-----L 392 (504)
Q Consensus 342 -----------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~-----~ 392 (504)
+.+|...+..++|+|+++ ++++++.|++|++||+..+..... ...... .
T Consensus 408 ~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~--~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~ 485 (902)
T 2oaj_A 408 MAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT--AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK 485 (902)
T ss_dssp EEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE--EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred EEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc--EEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence 122333444556677777 899999999999999987632211 000011 2
Q ss_pred cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------------------------------------------
Q psy17188 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP------------------------------------------- 429 (504)
Q Consensus 393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~------------------------------------------- 429 (504)
.|...|.+++|+||+++||+|+.||+|++||+.+++.
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 6778999999999999999999999999999976531
Q ss_pred ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE-----EEe-ecCCceEEEEEc-----cCC---CE
Q psy17188 430 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-----QFQ-GHTDGASCIDIS-----ADG---TK 495 (504)
Q Consensus 430 ~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~-~h~~~v~~~~~s-----~d~---~~ 495 (504)
.....+..|...|++++|+||| +||+|+.|++|+|||++++..+. .+. +|.+.|++++|+ ||| ++
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~ 644 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSIL 644 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceE
Confidence 1234566789999999999999 99999999999999998887654 232 788999999999 885 89
Q ss_pred EEEecCCCC
Q psy17188 496 LWTGGLDNT 504 (504)
Q Consensus 496 l~s~s~Dgt 504 (504)
|++|+.|||
T Consensus 645 l~sgs~D~t 653 (902)
T 2oaj_A 645 MVCGTDMGE 653 (902)
T ss_dssp EEEEETTSE
T ss_pred EEEEecCCc
Confidence 999999985
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-49 Score=398.22 Aligned_cols=407 Identities=16% Similarity=0.214 Sum_probs=322.5
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccc---cceeee-cCCCc-EEEEEEcC--CCcEEEEec-CCeEEEEeCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHA---RQINTL-SHGEV-VCAVTISN--PTKYVYTGG-KGCVKVWDIS 142 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~h~~~-V~~v~~s~--~~~~l~~~~-d~~i~vw~~~ 142 (504)
.+.+.+++|+|+|+.++++. ++.+.+|+..... +.+..+ +|.+. |++++|+| ++++|++++ |+.|++||+.
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 56799999999998888877 5677777766441 455555 89999 99999999 999999998 9999999996
Q ss_pred CCCCC---CceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCC
Q psy17188 143 QPGSK---TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 215 (504)
Q Consensus 143 ~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 215 (504)
++... ..........|...|.+++|+|++++|++++.+ +.|++||.. + ....+.+|...|.+++|+|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~--~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--N--SLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--C--EEEECCSCSSCEEEEEECSSS
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--C--cceeeecCCccEEEEEECCCC
Confidence 43100 011222333688999999999999999999987 689999832 2 366778999999999999999
Q ss_pred C-EEEEEeCCCcEEEEECCCCeEEEeecCCCC---CeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCC
Q psy17188 216 K-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTD---GASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK 290 (504)
Q Consensus 216 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 290 (504)
+ .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.|+.|++||+++++..
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------- 242 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL---------- 242 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE----------
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe----------
Confidence 8 899999999999999999999999999999 9999999999 999999999999999999988742
Q ss_pred CCccccee-c---ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce---------------------------
Q psy17188 291 TPVSQLDC-L---QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK--------------------------- 339 (504)
Q Consensus 291 ~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--------------------------- 339 (504)
... . .|...|.+++|+ ++++|++++.|+.|++||+++.+....
T Consensus 243 -----~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 243 -----KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 316 (615)
T ss_dssp -----EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred -----EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE
Confidence 111 2 677889999999 999999999999999999886532111
Q ss_pred ----------------eeeccCCCce---------------------------------eeEEECCCCCCceeeeccCCC
Q psy17188 340 ----------------AELTSSAPAC---------------------------------YALAISPDSKSPFFSSHHYKS 370 (504)
Q Consensus 340 ----------------~~~~~~~~~i---------------------------------~~~~~~~~~~~~~~~~~~~~~ 370 (504)
..+..|...+ .++++ +++. .+++++.|+
T Consensus 317 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~--~l~~~~~d~ 393 (615)
T 1pgu_A 317 LDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQ--EYSSISWDD 393 (615)
T ss_dssp TTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTT--CCEEEETTT
T ss_pred CCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCc--EEEEEeCCC
Confidence 1122233333 33344 2233 455556666
Q ss_pred eEEEEecCCCCC------------------------------------------------------------CCccc---
Q psy17188 371 CVKVWDISQPGS------------------------------------------------------------KTPVS--- 387 (504)
Q Consensus 371 ~i~i~d~~~~~~------------------------------------------------------------~~~~~--- 387 (504)
.+++||+..... ...+.
T Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~ 473 (615)
T 1pgu_A 394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFK 473 (615)
T ss_dssp EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEE
T ss_pred CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEE
Confidence 666665542110 00000
Q ss_pred -----c--cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-CCCceeEEEECC----------
Q psy17188 388 -----Q--LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SAPACYALAISP---------- 449 (504)
Q Consensus 388 -----~--~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~s~---------- 449 (504)
. .....|...|.+++|+|++++|++++.||.|++||+.+++.. ..+.. |...|++++|+|
T Consensus 474 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~h~~~v~~~~~sp~~~~~~~~~~ 551 (615)
T 1pgu_A 474 LSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK--TSRWAFRTSKINAISWKPAEKGANEEEI 551 (615)
T ss_dssp TTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--ECCSCCCSSCEEEEEECCCC------CC
T ss_pred CCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce--eEeecCCCCceeEEEEcCcccccccccc
Confidence 0 233457788999999999999999999999999999977543 34555 888999999999
Q ss_pred CCCEEEEeeCCCcEEEEEcCCc-ceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 450 DSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 450 ~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
++++|++++.||.|++||+.++ +++..+.+|.+.|++++|+||++ |++++.||+
T Consensus 552 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 552 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp SCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred CCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence 9999999999999999999998 78889999999999999999999 999999985
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.3e-50 Score=431.62 Aligned_cols=435 Identities=19% Similarity=0.299 Sum_probs=352.0
Q ss_pred cccCCCcCcccCCCC---------------CccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-c
Q psy17188 48 VGYDPHSQMRAPLGP---------------ASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-S 111 (504)
Q Consensus 48 ~~~~p~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 111 (504)
++|+|++.+++.+.. ..+.+| ...|.+++|+|+|+.++.+..++.+.+|+.... +.+..+ +
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~ 697 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--EDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-KLVHTYDE 697 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--CCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-ceEEEEcC
Confidence 689999887644321 123334 678999999999999999999999999887654 455555 8
Q ss_pred CCCcEEEEEEcC--CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188 112 HGEVVCAVTISN--PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 188 (504)
Q Consensus 112 h~~~V~~v~~s~--~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 188 (504)
|...|.+++|+| ++.++++++ |+.|++||+.++.. .. ...+|.+.|.+++|+|++++|++++.||.|++||+
T Consensus 698 ~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~--~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RN--TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EE--EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hh--eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 999999999999 556888888 99999999987532 22 23379999999999999999999999999999998
Q ss_pred CCCCccce-----------------------------------------------------eeeecCcCceEEEEECCCC
Q psy17188 189 ASPTPRIK-----------------------------------------------------AELTSSAPACYALAISPDS 215 (504)
Q Consensus 189 ~~~~~~~~-----------------------------------------------------~~~~~~~~~v~~~~~s~~~ 215 (504)
.+++.... ....+|...|.+++|+|++
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852 (1249)
T ss_dssp GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence 65432110 0112677889999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-------------------
Q psy17188 216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE------------------- 276 (504)
Q Consensus 216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~------------------- 276 (504)
+++++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp TEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred CEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999642
Q ss_pred --------------------------------------------------CceEEEeecCCCCCCCcccceecccCCceE
Q psy17188 277 --------------------------------------------------GCVKVWDISQPGSKTPVSQLDCLQRDNYIR 306 (504)
Q Consensus 277 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 306 (504)
+.+.+|+..... .......|...|.
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-----~~~~~~~h~~~v~ 1007 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-----VFSSGVGHKKAVR 1007 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS-----CEEECCCCSSCCC
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-----eeeecccCCCceE
Confidence 112222222111 1222345778899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCc--------------------------------------cceeeeccCCCc
Q psy17188 307 SVKLLPDGRTLIVGGEASNLSIWDLASPTP--------------------------------------RIKAELTSSAPA 348 (504)
Q Consensus 307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--------------------------------------~~~~~~~~~~~~ 348 (504)
+++|+|++++|++++.|+.|++||+.+++. .....+..|...
T Consensus 1008 ~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 1087 (1249)
T 3sfz_A 1008 HIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGT 1087 (1249)
T ss_dssp CEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSC
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCc
Confidence 999999999999999999999998766421 122334557778
Q ss_pred eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188 349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428 (504)
Q Consensus 349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~ 428 (504)
+.+++|+|+++ ++++++.|+.|++||+........ ...|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus 1088 v~~~~~s~d~~--~l~s~s~d~~v~iwd~~~~~~~~~-----l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1088 VLSCAISSDAT--KFSSTSADKTAKIWSFDLLSPLHE-----LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CCCEEECSSSS--SCEEECCSSCCCEECSSSSSCSBC-----CCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred EEEEEECCCCC--EEEEEcCCCcEEEEECCCcceeee-----eccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999998 789999999999999987643322 23578899999999999999999999999999999876
Q ss_pred cceee-------cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188 429 PRIKA-------ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 429 ~~~~~-------~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 501 (504)
..... ....|...|++++|+||+++|++++ |.|++||+.+++.+..+..|...|++++|+||+++|++++.
T Consensus 1161 ~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~ 1238 (1249)
T 3sfz_A 1161 LLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDN 1238 (1249)
T ss_dssp CCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECT
T ss_pred eEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecC
Confidence 54432 1256778899999999999999885 89999999999999999999999999999999999999999
Q ss_pred CCC
Q psy17188 502 DNT 504 (504)
Q Consensus 502 Dgt 504 (504)
||+
T Consensus 1239 dg~ 1241 (1249)
T 3sfz_A 1239 LGI 1241 (1249)
T ss_dssp TCC
T ss_pred CcE
Confidence 985
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.1e-49 Score=424.85 Aligned_cols=403 Identities=18% Similarity=0.288 Sum_probs=329.7
Q ss_pred cCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCC
Q psy17188 65 LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQ 143 (504)
Q Consensus 65 ~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~ 143 (504)
+.+| ...|.+++|+|+|+.++.+..++.+.+|+...........+|.+.|.+++|+|++++|++++ |+.|+|||+.+
T Consensus 611 ~~~h--~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 611 VRPH--TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp ECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred Eecc--cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 3455 67899999999999999999999998888765544333338999999999999999999998 99999999988
Q ss_pred CCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE
Q psy17188 144 PGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221 (504)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 221 (504)
+. .+..+ .+|...|.+++|+| ++.++++++.|+.|++||+.+++ ....+.+|...|.+++|+|++++|+++
T Consensus 689 ~~---~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 689 GK---LVHTY--DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp CC---EEEEE--ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred Cc---eEEEE--cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEEE
Confidence 63 22322 37899999999999 56689999999999999998765 366778999999999999999999999
Q ss_pred eCCCcEEEEECCCCeEEEee-------------------------------------------------------cCCCC
Q psy17188 222 CSDGNIAVWDLHNQTLVRQF-------------------------------------------------------QGHTD 246 (504)
Q Consensus 222 ~~dg~i~iwd~~~~~~~~~~-------------------------------------------------------~~h~~ 246 (504)
+.||.|++||+.+++....+ .+|..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 99999999999877544332 16778
Q ss_pred CeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce---------------------
Q psy17188 247 GASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI--------------------- 305 (504)
Q Consensus 247 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--------------------- 305 (504)
.|.+++|+|+++++++++.|+.|++||+.++... .....|...|
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~---------------~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v 906 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV---------------ADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE---------------EEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee---------------eecCCCccceEEEEECCCCCEEEEEeCCCeE
Confidence 8999999999999999999999999999887532 1122333444
Q ss_pred ----------------------------------------------------------EEEEEcCCCCEEEEEeCCCcEE
Q psy17188 306 ----------------------------------------------------------RSVKLLPDGRTLIVGGEASNLS 327 (504)
Q Consensus 306 ----------------------------------------------------------~~~~~~~~~~~l~~~~~dg~i~ 327 (504)
.+++|+|+++++++++.+|.|+
T Consensus 907 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~ 986 (1249)
T 3sfz_A 907 RVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIK 986 (1249)
T ss_dssp EEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCE
T ss_pred EEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEE
Confidence 4455555555555555555555
Q ss_pred EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188 328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 407 (504)
Q Consensus 328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 407 (504)
+||+.++ ........|...|.+++|+|+++ ++++++.|+.|++||+..+... ....+...+.+++|+|++
T Consensus 987 i~d~~~~--~~~~~~~~h~~~v~~l~~s~dg~--~l~s~~~dg~i~vwd~~~~~~~------~~~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A 987 IIELPNN--RVFSSGVGHKKAVRHIQFTADGK--TLISSSEDSVIQVWNWQTGDYV------FLQAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp EEETTTT--SCEEECCCCSSCCCCEEECSSSS--CEEEECSSSBEEEEETTTTEEE------CCBCCSSCEEEEEECSSS
T ss_pred EEEcCCC--ceeeecccCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCCceE------EEecCCCcEEEEEEcCCC
Confidence 5555444 23445567888999999999998 7999999999999999875322 234678899999999976
Q ss_pred CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEE
Q psy17188 408 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 487 (504)
Q Consensus 408 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 487 (504)
.+++++.|+.|++||+.+++... .+..|...|++++|+|++++|++++.||.|++||+.+++.+..+.+|.+.|+++
T Consensus 1057 -~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~ 1133 (1249)
T 3sfz_A 1057 -RLLSWSFDGTVKVWNVITGRIER--DFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCS 1133 (1249)
T ss_dssp -EEEEEESSSEEEEEETTTTCCCE--EEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEE
T ss_pred -cEEEEECCCcEEEEECCCCceeE--EEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEE
Confidence 57788899999999999876544 456778889999999999999999999999999999999999999999999999
Q ss_pred EEccCCCEEEEecCCCC
Q psy17188 488 DISADGTKLWTGGLDNT 504 (504)
Q Consensus 488 ~~s~d~~~l~s~s~Dgt 504 (504)
+|+||+++|++++.||+
T Consensus 1134 ~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A 1134 AFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp EECSSSSEEEEEETTSC
T ss_pred EECCCCCEEEEEeCCCE
Confidence 99999999999999985
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-48 Score=399.31 Aligned_cols=387 Identities=12% Similarity=0.090 Sum_probs=283.9
Q ss_pred cceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 105 RQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 105 ~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
......+|.+.|++++|+|++++||+|+ ||.|+||+.... .......|...|.+++|+| +++|++++.|++|
T Consensus 9 ~~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v 81 (902)
T 2oaj_A 9 AETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTV 81 (902)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEE
T ss_pred ccccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeE
Confidence 4455569999999999999999999998 999999998653 1222235788999999999 8899999999999
Q ss_pred EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE-----------EeecCCCCCeEEEE
Q psy17188 184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-----------RQFQGHTDGASCID 252 (504)
Q Consensus 184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~h~~~v~~~~ 252 (504)
++||+.+++. ...+. |...|++++|+|++++|++|+.||.|++||++++++. ..+.+|.+.|.+++
T Consensus 82 ~lWd~~~~~~--~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 82 YVLSLYSQKV--LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EEEETTTCSE--EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred EEEECCCCcE--EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 9999997654 33343 6678999999999999999999999999999998764 34567999999999
Q ss_pred EccC-CCEEEEEcCCCeEEEEECCCCceEE-EeecCC-CCCCC-cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188 253 ISAD-GTKLWTGGLDNTVRSWDLREGCVKV-WDISQP-GSKTP-VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 328 (504)
Q Consensus 253 ~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 328 (504)
|+|+ +..|++++.|+.| +||+++++... +....+ +.... ........|...|.+++|+|+|++|++++.|+.|++
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 9995 5689999999999 99999887432 111000 00000 000011234577999999999999999999999999
Q ss_pred EeCCCCCccceeee---c-------------cCCCceeeEEECC----CCCCceeeeccC--------------------
Q psy17188 329 WDLASPTPRIKAEL---T-------------SSAPACYALAISP----DSKSPFFSSHHY-------------------- 368 (504)
Q Consensus 329 ~d~~~~~~~~~~~~---~-------------~~~~~i~~~~~~~----~~~~~~~~~~~~-------------------- 368 (504)
||+++++......+ . .+...|.+++|++ ++.. ++++++.
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~-ll~sg~~~~~~~~~~v~~~~~~~~~~~ 316 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS-LLISHKSISRGDNQSLTMIDLGYTPRY 316 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE-EEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE-EEEeCCCCCCCCCceEEEEecCCCCCc
Confidence 99988654322111 1 1234678888853 2211 3344322
Q ss_pred --------------------------------------------------------CCeEEEEecCCCCCCCcc--cccc
Q psy17188 369 --------------------------------------------------------KSCVKVWDISQPGSKTPV--SQLD 390 (504)
Q Consensus 369 --------------------------------------------------------~~~i~i~d~~~~~~~~~~--~~~~ 390 (504)
|+.|++||+..+...... ....
T Consensus 317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~ 396 (902)
T 2oaj_A 317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN 396 (902)
T ss_dssp GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence 344445544322100000 0000
Q ss_pred c----------------------------------ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce--ee-
Q psy17188 391 C----------------------------------LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--KA- 433 (504)
Q Consensus 391 ~----------------------------------~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~--~~- 433 (504)
. ..|...+..++|+|++++|++|+.|++|++||+.++.... ..
T Consensus 397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~ 476 (902)
T 2oaj_A 397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFE 476 (902)
T ss_dssp GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE
T ss_pred ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEE
Confidence 0 1122233445667999999999999999999998874321 11
Q ss_pred -cc-----cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc-----------------------------------
Q psy17188 434 -EL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----------------------------------- 472 (504)
Q Consensus 434 -~~-----~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~----------------------------------- 472 (504)
.+ .+|...|++++|+||+++||+|+.||+|+|||+.+++
T Consensus 477 ~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (902)
T 2oaj_A 477 VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDR 556 (902)
T ss_dssp EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGG
T ss_pred eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccccc
Confidence 11 2678899999999999999999999999999998762
Q ss_pred ----------eEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 473 ----------LVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 473 ----------~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
++..+.+|.+.|++++||||| +||+|+.|||
T Consensus 557 ~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 557 APTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp CCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred CCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 367788899999999999999 9999999985
No 10
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.8e-47 Score=351.86 Aligned_cols=329 Identities=66% Similarity=1.064 Sum_probs=290.4
Q ss_pred CCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188 69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT 148 (504)
Q Consensus 69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~ 148 (504)
.+.+.+.+++++|||+.++++..++.++.+..+...+.+..++|.+.|++++|+|++++|++++|+.|++||+.+++...
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCS
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCcee
Confidence 34567999999999999999999998888888888888888899999999999999999999999999999999877666
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 228 (504)
.+..+....|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|++++|++++.|+.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 77766666899999999999999999999999999999999877656777888999999999999999999999999999
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188 229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 308 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 308 (504)
+||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++. .....+...+.++
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----------------~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----------------LQQHDFTSQIFSL 230 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----------------EEEEECSSCEEEE
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce----------------EeeecCCCceEEE
Confidence 999999999999999999999999999999999999999999999998873 2334566789999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188 309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ 388 (504)
Q Consensus 309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 388 (504)
+|+|+++++++++.++.|++||+++.+. ..
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~---~~----------------------------------------------- 260 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDK---YQ----------------------------------------------- 260 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCE---EE-----------------------------------------------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCe---EE-----------------------------------------------
Confidence 9999999999999999999999876421 00
Q ss_pred cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
...|...+.+++|+|++++|++++.||.|++||+.+++.... ..+...+.+++|+|++++|++++.||.|++|++
T Consensus 261 --~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 261 --LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp --ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred --EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE---ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 012456688999999999999999999999999998765533 335678999999999999999999999999996
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=347.41 Aligned_cols=323 Identities=14% Similarity=0.214 Sum_probs=251.9
Q ss_pred ccceeee-cCCC-cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC
Q psy17188 104 ARQINTL-SHGE-VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 180 (504)
Q Consensus 104 ~~~~~~~-~h~~-~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 180 (504)
.+.+.++ +|.+ .|.+++|+|++++|++++ |++|+|||++++... .......+|...|.+++|+|++++|++++.|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE--EEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce--eeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 3455666 7887 999999999999999998 999999998764211 1122234799999999999999999999999
Q ss_pred CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCC
Q psy17188 181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADG 257 (504)
Q Consensus 181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~ 257 (504)
++|++|++..........+.+|...|.+++|+|++++|++++.|++|++||++++ +.+..+.+|...|.+++|+|++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 9999999987765567788899999999999999999999999999999999875 4567788999999999999999
Q ss_pred CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188 258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 337 (504)
Q Consensus 258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 337 (504)
++|++++.|++|++||.++++... ......|...|.+++|+|++++|++++.|++|++||.......
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~-------------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVC-------------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEE-------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CEEEEEeCCCcEEEEEecCCCEEE-------------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 999999999999999998775321 2344568889999999999999999999999999996433211
Q ss_pred ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE-EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK-VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416 (504)
Q Consensus 338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d 416 (504)
.. +.....+.... +..+. ..|...|.+++|+|++..|++++.|
T Consensus 230 ~~-----------------------~~~~~~~~~~~~~~~~~-------------~~h~~~v~~v~~~~~~~~l~s~~~d 273 (345)
T 3fm0_A 230 QG-----------------------VACSGSDPSWKCICTLS-------------GFHSRTIYDIAWCQLTGALATACGD 273 (345)
T ss_dssp TC-----------------------CCCC---CEEEEEEEEC-------------SSCSSCEEEEEECTTTCCEEEEETT
T ss_pred cc-----------------------ceeeccCCccceeEEec-------------CCCCCcEEEEEEecCCCEEEEEeCC
Confidence 10 00000011100 00000 1256779999999999999999999
Q ss_pred CcEEEeeCCCCCcc-------eeecccCCCCceeEEEECCCC-CEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188 417 SNLSIWDLASPTPR-------IKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF 477 (504)
Q Consensus 417 g~i~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 477 (504)
+.|++|+....... ......+|...|++++|+|++ .+||+|+.||+|++|++.+++....+
T Consensus 274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 99999998754311 112245788999999999987 59999999999999999988766544
No 12
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2e-46 Score=376.13 Aligned_cols=368 Identities=17% Similarity=0.235 Sum_probs=294.0
Q ss_pred cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCC-CceeeeeecCCCCc-eEEEEEcc--CCCEEEEecCCCcEEEE
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSK-TPVSQLDCLQRDNY-IRSVKLLP--DGRTLIVGGEASNLSIW 186 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~-v~~~~~s~--~~~~l~~~~~dg~i~iw 186 (504)
.|.+.|.+++|+|++++|++++++.|+|||++++... .... .+.+|... |++++|+| ++++|++++.||.|++|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~--~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVV--QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEE--EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccce--EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6889999999999999999999999999999865211 2222 33479999 99999999 99999999999999999
Q ss_pred eCCCC------CccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188 187 DLASP------TPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQTLVRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 187 ~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 256 (504)
|+.++ +......+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+.+|...|.+++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence 99755 344566778899999999999999999999987 6788887 67788899999999999999999
Q ss_pred CC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC---ceEEEEEcCC-CCEEEEEeCCCcEEEEeC
Q psy17188 257 GT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLPD-GRTLIVGGEASNLSIWDL 331 (504)
Q Consensus 257 ~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~v~d~ 331 (504)
++ ++++++.|+.|++||+.+++. ......|.. .|.+++|+|+ +++|++++.|+.|++||+
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKF---------------SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEE---------------EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred CCcEEEEEeCCCcEEEEeCCCcce---------------eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 97 899999999999999988764 223344666 8999999999 999999999999999999
Q ss_pred CCCCccceeee-c---cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-------------------
Q psy17188 332 ASPTPRIKAEL-T---SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ------------------- 388 (504)
Q Consensus 332 ~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~------------------- 388 (504)
++++ ....+ . .|...+.+++|+ +++ ++++++.|+.|++||++..........
T Consensus 237 ~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (615)
T 1pgu_A 237 KSGE--FLKYIEDDQEPVQGGIFALSWL-DSQ--KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 311 (615)
T ss_dssp TTCC--EEEECCBTTBCCCSCEEEEEES-SSS--EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred CCCC--EeEEecccccccCCceEEEEEc-CCC--EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence 8874 33444 4 788899999999 776 899999999999999875421111000
Q ss_pred ---------------------ccc---------------------------------ccCCCceEEEEEcCCCC------
Q psy17188 389 ---------------------LDC---------------------------------LQRDNYIRSVKLLPDGR------ 408 (504)
Q Consensus 389 ---------------------~~~---------------------------------~~~~~~i~~~~~s~~g~------ 408 (504)
... ..|...|.+++| +++.
T Consensus 312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~ 390 (615)
T 1pgu_A 312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS 390 (615)
T ss_dssp EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence 000 112233333343 2233
Q ss_pred -------------------------------------------------------------------EEEEeeC-CCcEE
Q psy17188 409 -------------------------------------------------------------------TLIVGGE-ASNLS 420 (504)
Q Consensus 409 -------------------------------------------------------------------~l~~~~~-dg~i~ 420 (504)
+|++++. |+.|+
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence 3444444 55555
Q ss_pred EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEcc--------
Q psy17188 421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISA-------- 491 (504)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~-------- 491 (504)
+||+.+++... ..+..|...|++++|+|++++|++++.||.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 471 ~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~ 549 (615)
T 1pgu_A 471 VFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 549 (615)
T ss_dssp EEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------
T ss_pred EEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccc
Confidence 55554332211 45567888999999999999999999999999999999999999888 999999999999
Q ss_pred --CCCEEEEecCCCC
Q psy17188 492 --DGTKLWTGGLDNT 504 (504)
Q Consensus 492 --d~~~l~s~s~Dgt 504 (504)
++++|++++.||+
T Consensus 550 ~~~~~~l~~~~~dg~ 564 (615)
T 1pgu_A 550 EIEEDLVATGSLDTN 564 (615)
T ss_dssp CCSCCEEEEEETTSC
T ss_pred ccCCCEEEEEcCCCc
Confidence 9999999999985
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6e-46 Score=339.77 Aligned_cols=288 Identities=19% Similarity=0.323 Sum_probs=254.5
Q ss_pred cCCCCceEEEEEccC----CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188 156 LQRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 231 (504)
.+|.+.|.+++|+|+ +++|++|+.|++|++|++...+......+.+|...|.+++|++++.++++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 379999999999984 6799999999999999998766555667889999999999999999999999999999999
Q ss_pred CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++. ......+...+.+++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~---------------~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK---------------EYSLDTRGKFILSIAYS 173 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE---------------EEEEECSSSCEEEEEEC
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce---------------eEEecCCCceEEEEEEC
Confidence 999999999999999999999999999999999999999999998864 23334566789999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC 391 (504)
Q Consensus 312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 391 (504)
|++++|++++.|+.|++||++++ .....+..|...+.+++|+|+++ ++++++.|+.|++||++..... ...
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spd~~--~l~s~s~dg~i~iwd~~~~~~~-----~~~ 244 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHANLA-----GTL 244 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCCCEEEECTTSC--EEEEECTTSCEEEEETTTCCEE-----EEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCC--cEEEEEcccCCceeEEEEcCCCC--EEEEEcCCCeEEEEECCCccee-----EEE
Confidence 99999999999999999999876 45566778889999999999998 8999999999999999865322 233
Q ss_pred ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
..|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|++++|++++.||.|+|||+.
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE--EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4688899999999999999999999999999998764 444567788999999999999999999999999999963
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-46 Score=352.96 Aligned_cols=300 Identities=19% Similarity=0.374 Sum_probs=260.1
Q ss_pred ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188 155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 234 (504)
Q Consensus 155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 234 (504)
..+|...|++++|+|++++|++|+.|++|++||+.+++. ...+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~--~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 348999999999999999999999999999999997664 567889999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188 235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314 (504)
Q Consensus 235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 314 (504)
++++..+.+|...|.+++|+|++++|++++.|++|++||++++.. ......|...+.++.++|++
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC---------------VKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE---------------EEEEECCSSCEEEEEECTTS
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEEeCCCccEEEEEECCCC
Confidence 999999999999999999999999999999999999999998874 23345678889999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188 315 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR 394 (504)
Q Consensus 315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 394 (504)
++|++++.|+.|++||+.+. .....+..|...+.+++|+|++....+ ....+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~--~~~~~------------------------ 298 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATK--ECKAELREHRHVVECISWAPESSYSSI--SEATG------------------------ 298 (410)
T ss_dssp SEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECCSCGGGGG--GGCCS------------------------
T ss_pred CEEEEEcCCCeEEEEECCCC--ceeeEecCCCceEEEEEEcCcccccch--hhhcc------------------------
Confidence 99999999999999999876 445567788889999999998763111 10000
Q ss_pred CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188 395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 474 (504)
Q Consensus 395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 474 (504)
........++.+|++|+.|+.|++||++++.. ...+.+|...|++++|+|++++|++++.||.|++||+.+++++
T Consensus 299 ---~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 299 ---SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp ---CC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred ---ccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 00112234688999999999999999997754 4456678889999999999999999999999999999999999
Q ss_pred EEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 475 RQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 475 ~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
..+.+|...|++++|+|++++|++||.||+
T Consensus 374 ~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~ 403 (410)
T 1vyh_C 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred EEEcCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 999999999999999999999999999985
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.8e-46 Score=350.96 Aligned_cols=288 Identities=16% Similarity=0.324 Sum_probs=253.9
Q ss_pred eeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188 107 INTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 185 (504)
Q Consensus 107 ~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 185 (504)
....+|.+.|++++|+|++.+|++++ |++|+|||+.++..... ..+|...|.+++|+|++++|++|+.|++|++
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~-----l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-----LKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE-----EeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 33449999999999999999999998 99999999988654332 2379999999999999999999999999999
Q ss_pred EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL 265 (504)
Q Consensus 186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 265 (504)
||+.+.+ ....+.+|...|.+++|+|++++|++++.|++|++||+++++++..+.+|...|.++.++|++.+|++++.
T Consensus 177 wd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 177 WDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp EETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC
Confidence 9998654 45677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--------------------CCEEEEEeCCCc
Q psy17188 266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--------------------GRTLIVGGEASN 325 (504)
Q Consensus 266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~ 325 (504)
|++|++||+++++. ......|...|.+++|+|+ +.+|++++.|+.
T Consensus 255 D~~v~vwd~~~~~~---------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 255 DQTVRVWVVATKEC---------------KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp TSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred CCeEEEEECCCCce---------------eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 99999999998865 2334567888999999996 678999999999
Q ss_pred EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188 326 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP 405 (504)
Q Consensus 326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 405 (504)
|++||++++ .....+..|...|.+++|+|+++ ++++++.|+.|++||+........ ...|...|.+++|+|
T Consensus 320 i~iwd~~~~--~~~~~~~~h~~~v~~v~~~~~g~--~l~s~s~D~~i~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~ 390 (410)
T 1vyh_C 320 IKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKT-----LNAHEHFVTSLDFHK 390 (410)
T ss_dssp EEEEETTTT--EEEEEEECCSSCEEEEEECSSSS--CEEEEETTTEEEEECCTTSCCCEE-----EECCSSCEEEEEECS
T ss_pred EEEEECCCC--ceEEEEECCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCceEEE-----EcCCCCcEEEEEEcC
Confidence 999999877 45566778899999999999998 789999999999999976543322 236788999999999
Q ss_pred CCCEEEEeeCCCcEEEeeCC
Q psy17188 406 DGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 406 ~g~~l~~~~~dg~i~iwd~~ 425 (504)
++.+|++|+.|+.|++|+++
T Consensus 391 ~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 391 TAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSSCEEEEETTSEEEEEC--
T ss_pred CCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999999863
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-45 Score=340.62 Aligned_cols=291 Identities=19% Similarity=0.361 Sum_probs=250.2
Q ss_pred cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188 105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 182 (504)
Q Consensus 105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 182 (504)
+...++ +|.+.|.+++|+|++++|++++ |++|+|||+.++.. +..+ ..|...|.+++|+|++++|++++.|+.
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~---~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK---VHAI--PLRSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE---EEEE--ECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc---ceEe--ecCCccEEEEEECCCCCEEEEEeCCCe
Confidence 334455 8999999999999999999998 99999999987532 2222 368889999999999999999999999
Q ss_pred EEEEeCCCCCc--cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188 183 LSIWDLASPTP--RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL 260 (504)
Q Consensus 183 i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 260 (504)
|++|++.+.+. .....+.+|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|.+.|.+++|+|++++|
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 99999987542 34556789999999999998874 8899999999999999999999999999999999999999999
Q ss_pred EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 340 (504)
++++.|++|++||++++.. ......|...|.+++|+|++++|++++.|+.|++||+++.+.....
T Consensus 200 ~sg~~d~~v~~wd~~~~~~---------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 200 VSGACDASAKLWDVREGMC---------------RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEETTSCEEEEETTTCSE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeCCCcEEEEECCCCee---------------EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 9999999999999998864 2334567888999999999999999999999999999886544333
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 420 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~ 420 (504)
....+...+.+++|+|+++ ++++++.|+.|++||+...... .....|...|.+++|+|+|++|++|+.|+.|+
T Consensus 265 ~~~~~~~~v~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~~-----~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 265 SHDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRA-----GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CCTTCCSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEE-----EEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ccCCcccceEEEEECCCCC--EEEEECCCCeEEEEEcccCcEe-----eEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 3334445799999999998 8999999999999998764322 22346889999999999999999999999999
Q ss_pred Eee
Q psy17188 421 IWD 423 (504)
Q Consensus 421 iwd 423 (504)
+||
T Consensus 338 iWd 340 (340)
T 1got_B 338 IWN 340 (340)
T ss_dssp EEC
T ss_pred ecC
Confidence 997
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.3e-46 Score=344.97 Aligned_cols=323 Identities=16% Similarity=0.243 Sum_probs=236.4
Q ss_pred EEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC------CCcEEEEeCCC
Q psy17188 117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLAS 190 (504)
Q Consensus 117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~iw~~~~ 190 (504)
..+.+.+++.++.+.++.....|++... . ...|+..|++++|+|||++|++++. |+.|++|+..+
T Consensus 9 sg~d~g~~~~~~~~~g~~~~~~w~~p~~---~------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~ 79 (357)
T 4g56_B 9 SGVDLGTENLYFQSNGSSKGSAWGRPVT---A------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPE 79 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC
T ss_pred cCCCCCccceEEecCCCccccccCCCCC---C------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCC
Confidence 4456667777777777888899997542 1 1268999999999999999999987 77899999876
Q ss_pred CCcc--ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe----ecCCCCCeEEEEEccCCCEEEEEc
Q psy17188 191 PTPR--IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ----FQGHTDGASCIDISADGTKLWTGG 264 (504)
Q Consensus 191 ~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~ 264 (504)
+... .......|...|.+++|+|++. +++++.||+|++||+.+++.... ..+|...|.+++|+|++++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 80 GAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp ---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence 5533 2344567888999999999985 55678899999999998865433 347999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
.|++|++||+++++. ......|...|.+++|++++. ++++++.|+.|++||+++++........
T Consensus 159 ~dg~v~iwd~~~~~~---------------~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 159 KDFSVKVWDLSQKAV---------------LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp TTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred CCCeEEEEECCCCcE---------------EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 999999999998875 333456788999999999874 7889999999999999988776666677
Q ss_pred cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEe
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIW 422 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iw 422 (504)
.+...+.+++|+|++.. ++++++.|+.|++||++...... ....+...|.+++|+|++ ++|++++.|+.|+||
T Consensus 224 ~~~~~v~~v~~sp~~~~-~la~g~~d~~i~~wd~~~~~~~~-----~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDD-TFACGDETGNVSLVNIKNPDSAQ-----TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp TCCSCEEEEEECTTSTT-EEEEEESSSCEEEEESSCGGGCE-----EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred cccccccchhhhhcccc-eEEEeecccceeEEECCCCcEeE-----EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 77888999999998765 78899999999999998754322 234578889999999987 579999999999999
Q ss_pred eCCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCCcce
Q psy17188 423 DLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL 473 (504)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~ 473 (504)
|+++++... ..+|...|++++|+| |+++|++++.||+|++|++.+...
T Consensus 298 d~~~~~~~~---~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 298 DADFSEVFR---DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp CTTSCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred ECCCCcEeE---ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 998775432 347889999999998 899999999999999999976433
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-44 Score=334.97 Aligned_cols=282 Identities=20% Similarity=0.341 Sum_probs=246.7
Q ss_pred eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188 154 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 233 (504)
Q Consensus 154 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 233 (504)
.+.+|.+.|.+++|+|++++|++++.|++|++||+.+++. ...+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE--EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc--ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 3448999999999999999999999999999999987653 56678899999999999999999999999999999998
Q ss_pred CC----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 234 NQ----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 234 ~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
++ +....+.+|.+.|.++.|++++ .+++++.|++|++||+++++. ......|...|.+++
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ---------------TTTFTGHTGDVMSLS 191 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEE
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE---------------EEEEcCCCCceEEEE
Confidence 75 4667788999999999999877 589999999999999998874 233456788999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL 389 (504)
Q Consensus 310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 389 (504)
|+|+++++++++.|+.|++||++++... ..+
T Consensus 192 ~~~~~~~l~sg~~d~~v~~wd~~~~~~~--~~~----------------------------------------------- 222 (340)
T 1got_B 192 LAPDTRLFVSGACDASAKLWDVREGMCR--QTF----------------------------------------------- 222 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEE--EEE-----------------------------------------------
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCeeE--EEE-----------------------------------------------
Confidence 9999999999999999999998765211 110
Q ss_pred ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
..|...|.+++|+|++++|++++.|+.|++||+++++.........+...|++++|+|++++|++|+.||.|++||+.
T Consensus 223 --~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 223 --TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred --cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 134566889999999999999999999999999877655555444555679999999999999999999999999999
Q ss_pred CcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 470 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 470 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+++.+..+.+|.+.|.+++|+||+++|++||.||+
T Consensus 301 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred cCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 99999999999999999999999999999999986
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.4e-45 Score=330.16 Aligned_cols=286 Identities=17% Similarity=0.329 Sum_probs=251.2
Q ss_pred ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188 195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~ 274 (504)
....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
.+++. ......|...|.+++|+|++++|++++.|++|++||+++.. .....+..|...|.+++|
T Consensus 85 ~~~~~---------------~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 85 NTGEK---------------VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp TTCCE---------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEE
T ss_pred CCCcE---------------EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEE
Confidence 98874 33445788999999999999999999999999999998653 344567788999999999
Q ss_pred CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
+|++.. .+++++.|+.|++||++........ ...+...+..+.|+| ++.+|++++.|+.|++||+++++ ..
T Consensus 149 ~p~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~--~~ 221 (304)
T 2ynn_A 149 NPKDPS-TFASGCLDRTVKVWSLGQSTPNFTL----TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS--CV 221 (304)
T ss_dssp CTTCTT-EEEEEETTSEEEEEETTCSSCSEEE----ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE--EE
T ss_pred CCCCCC-EEEEEeCCCeEEEEECCCCCcccee----ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc--cc
Confidence 995433 7999999999999999765332221 123556788999987 78899999999999999999764 44
Q ss_pred ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC--EEEEecCCC
Q psy17188 433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT--KLWTGGLDN 503 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~--~l~s~s~Dg 503 (504)
..+.+|...|.+++|+|++++|++++.||.|++||+.+++++..+..|...+++++|+|+++ ++++|+.||
T Consensus 222 ~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred eeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence 55678899999999999999999999999999999999999999999999999999999875 688888886
No 20
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-45 Score=380.61 Aligned_cols=401 Identities=15% Similarity=0.239 Sum_probs=323.3
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT 148 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~ 148 (504)
.++|.+++|+|+|+.++++..++.+.+|+.... +.+..+ +|...|.+++|+|++++|++++ |+.|++||+.+++.
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-- 89 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-- 89 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE--
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--
Confidence 668999999999999999999988888876554 444455 8999999999999999999988 99999999987632
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcE
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNI 227 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i 227 (504)
+.. ...|...|.+++|+|++++|++++.|+.|++||+.++. .....+.+|...|.+++|+| +++.|++++.||.|
T Consensus 90 -~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 90 -VVD--FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp -EEE--EECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred -EEE--EecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 222 23789999999999999999999999999999998653 34566788999999999999 88899999999999
Q ss_pred EEEECCCCeEEEeecCCC-CCeEEEEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188 228 AVWDLHNQTLVRQFQGHT-DGASCIDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304 (504)
Q Consensus 228 ~iwd~~~~~~~~~~~~h~-~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (504)
++||+.+++....+..+. ..+.+++|+| ++.+|++++.||.|++||+.+++. ......|...
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---------------~~~~~~~~~~ 230 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC---------------VATLEGHMSN 230 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE---------------EEEEECCSSC
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE---------------EEEEcCCCCC
Confidence 999999887777776554 8999999999 999999999999999999998864 2333457788
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 384 (504)
+.+++|+|++++|++++.||.|++||+.+. .....+..+...+.+++|+|++...+++++ .++.+.+|++.......
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 307 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTY--KVEKTLNVGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGNDEPTL 307 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTC--SEEEEECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCCSCCE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEeecCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCCCcee
Confidence 999999999999999999999999999876 455566777789999999999986445554 46678888875432111
Q ss_pred ccc--------------------------------------ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188 385 PVS--------------------------------------QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 385 ~~~--------------------------------------~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~ 426 (504)
.+. ......+...+.+++|+|+|+++++++ ++.+.+|++..
T Consensus 308 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 308 SLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp EECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred EECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcc
Confidence 000 001122344678999999999999987 88999998753
Q ss_pred CCc-----------------c----------eeecccCCCCceeEEEECCCC---CEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188 427 PTP-----------------R----------IKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTLVRQ 476 (504)
Q Consensus 427 ~~~-----------------~----------~~~~~~~~~~~v~~l~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~ 476 (504)
... . ....+.++...+.++.|+|++ ++|++++.|+.|++||+.+++.+..
T Consensus 387 ~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~ 466 (814)
T 3mkq_A 387 WRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRR 466 (814)
T ss_dssp TEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEE
T ss_pred ccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEE
Confidence 211 0 001223455567778889988 6888888899999999999999988
Q ss_pred EeecCCceEEEEEccCCCEEEEec
Q psy17188 477 FQGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 477 ~~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
+..|.. .+.|+|||++|++++
T Consensus 467 ~~~~~~---~v~~s~dg~~la~~~ 487 (814)
T 3mkq_A 467 IDVNAK---DVIWSDNGELVMIVN 487 (814)
T ss_dssp ESSCEE---EEEECTTSSEEEEEE
T ss_pred EecCCC---EEEEcCCCCEEEEEE
Confidence 887764 899999999999994
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.9e-45 Score=333.23 Aligned_cols=286 Identities=20% Similarity=0.325 Sum_probs=249.1
Q ss_pred cCCCcEEEEEEcCC----CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188 111 SHGEVVCAVTISNP----TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 185 (504)
Q Consensus 111 ~h~~~V~~v~~s~~----~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 185 (504)
+|.+.|.+++|+|+ +++|++|+ |++|+||++..+. ........+|...|.+++|++++.++++++.|++|++
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~---~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER---LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE---EEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC---eeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 89999999999974 67899988 9999999987632 2223345589999999999999999999999999999
Q ss_pred EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL 265 (504)
Q Consensus 186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 265 (504)
||+.+++. ...+..+...+.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.
T Consensus 107 Wd~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 107 WDLENGKQ--IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EETTTTEE--EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99987653 5566778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188 266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS 345 (504)
Q Consensus 266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 345 (504)
|+.|++||+++++. ......|...|.+++|+|++++|++++.|+.|++||+++. .....+..|
T Consensus 185 dg~i~iwd~~~~~~---------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h 247 (321)
T 3ow8_A 185 DGIINIFDIATGKL---------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--NLAGTLSGH 247 (321)
T ss_dssp TSCEEEEETTTTEE---------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--CEEEEECCC
T ss_pred CCeEEEEECCCCcE---------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--ceeEEEcCC
Confidence 99999999998874 2233467788999999999999999999999999999876 445677889
Q ss_pred CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
...|.+++|+|+++ ++++++.|+.|++||+++.... .....|...|.+++|+|++++|++++.|+.|++||..
T Consensus 248 ~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~~~-----~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 248 ASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRTCV-----HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEE-----EEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCEEE-----EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999998 8999999999999999764322 2234678899999999999999999999999999963
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-45 Score=346.30 Aligned_cols=307 Identities=20% Similarity=0.332 Sum_probs=250.4
Q ss_pred cccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC
Q psy17188 103 HARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 180 (504)
Q Consensus 103 ~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 180 (504)
.......+ +|.+.|++++|+|++++|++++ |++|+|||+.++.. .. ....|...|.+++|+|++++|++|+.|
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~---~~--~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK---TH--AIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EE--EEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---ce--EEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 34455556 9999999999999999999998 99999999987532 22 233788999999999999999999999
Q ss_pred CcEEEEeCCCCC-----ccceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEee-----cCCCCCeE
Q psy17188 181 SNLSIWDLASPT-----PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF-----QGHTDGAS 249 (504)
Q Consensus 181 g~i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~ 249 (504)
+.+++|++.+.. ......+.+|...|.++.|+|++ ..|++++.|++|++||+.+++.+..+ .+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 999999987532 22345678999999999999964 57999999999999999999988877 67999999
Q ss_pred EEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188 250 CIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 328 (504)
Q Consensus 250 ~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 328 (504)
+++|++ ++++|++|+.|++|++||++..... ......|...|.+++|+|++++|++++.|++|++
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~--------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~l 275 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRA--------------VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRL 275 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCC--------------CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcc--------------eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEE
Confidence 999987 8889999999999999999743210 2334568889999999999999999999999999
Q ss_pred EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188 329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 408 (504)
Q Consensus 329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 408 (504)
||+++++... .+...... ...+...+.+++|+|+|+
T Consensus 276 wd~~~~~~~~-----------------------------------~~~~~~~~---------~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 276 FDMRTGHQLQ-----------------------------------VYNREPDR---------NDNELPIVTSVAFSISGR 311 (380)
T ss_dssp EETTTTEEEE-----------------------------------EECCCCSS---------SCCSSCSCSEEEECSSSS
T ss_pred EECCCCcEEE-----------------------------------Eecccccc---------cccccCceEEEEECCCCC
Confidence 9998763211 11100000 001223467999999999
Q ss_pred EEEEeeCCCcEEEeeCCCCCcceeec--ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 409 TLIVGGEASNLSIWDLASPTPRIKAE--LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 409 ~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
+|++|+.||.|++||+..++...... ..+|...|++++|+||+++|++|+.|++|+||++...+
T Consensus 312 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 312 LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999998776544332 25788899999999999999999999999999997654
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.6e-45 Score=334.09 Aligned_cols=293 Identities=16% Similarity=0.228 Sum_probs=238.3
Q ss_pred cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCC-------CCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQ-------PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
.|...|.+++|+|||++|++++|+++++||... ...... .......++..|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEG-FCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGG-GCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcc-eeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 466789999999999999999988888887321 000011 111222467789999999985 68899999999
Q ss_pred EEEeCCCCCccce--eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188 184 SIWDLASPTPRIK--AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL 260 (504)
Q Consensus 184 ~iw~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 260 (504)
+|||+.+++.... ....+|...|++++|+|++++|++++.|++|++||+++++++..+.+|...|.+++|++++. +|
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 9999998765433 34568999999999999999999999999999999999999999999999999999999874 78
Q ss_pred EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
++++.|++|++||+++++... .+....+...+.+++|+| ++++|++++.|+.|++||+++++ ..
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~-------------~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~--~~ 250 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPAS-------------QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS--CV 250 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEE-------------ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CC
T ss_pred eeeccccccccccccccceee-------------eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc--EE
Confidence 999999999999999876321 233344556789999999 45788999999999999999874 45
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCc
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASN 418 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~ 418 (504)
..+..|...|.+++|+|++.. ++++++.|+.|++||++.++ ......|...|++++|+|+++ +|++++.|++
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~-~lasgs~D~~i~vwd~~~~~------~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVP-FLASLSEDCSLAVLDSSLSE------LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTCCE------EEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEEcCCCCCEEEEEEccCCCe-EEEEEeCCCeEEEEECCCCc------EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 667889999999999999864 78999999999999987642 223457899999999999986 5778999999
Q ss_pred EEEeeCCCC
Q psy17188 419 LSIWDLASP 427 (504)
Q Consensus 419 i~iwd~~~~ 427 (504)
|++|++.+.
T Consensus 324 v~~w~v~~~ 332 (344)
T 4gqb_B 324 VVHHVVPTE 332 (344)
T ss_dssp EEEEECCC-
T ss_pred EEEEECCCC
Confidence 999999864
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-44 Score=334.91 Aligned_cols=291 Identities=19% Similarity=0.377 Sum_probs=248.6
Q ss_pred ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
....+ +|.+.|++++|+|++++|++++ |++|+|||..++.. ... ...|...|.+++|+|++++|++++.|+.+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~---~~~--~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---EHA--VTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEE--EECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc---ceE--EecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 34455 9999999999999999999999 99999999877532 222 22577889999999999999999999999
Q ss_pred EEEeCCCCC----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc--CC
Q psy17188 184 SIWDLASPT----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA--DG 257 (504)
Q Consensus 184 ~iw~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~ 257 (504)
++|++.... ......+..|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 999986532 234556778999999999999999999999999999999999999999999999999999988 56
Q ss_pred CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188 258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 337 (504)
Q Consensus 258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 337 (504)
++|++++.||+|++||+++++. ......|...|.+++|+|++++|++++.|++|++||++.....
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~---------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQC---------------VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcE---------------EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8999999999999999998874 2334567889999999999999999999999999999876443
Q ss_pred ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 417 (504)
Q Consensus 338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg 417 (504)
.......+...+.+++|+|++. ++++++.|+.|++||+..+... .....|...|.+++|+|+|++|++++.|+
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~~-----~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSRV-----SILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCSEE-----EEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEcCCCcccceeEEEEeCCCC--EEEEEECCCcEEEEECCCCceE-----EEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 3333333445788999999998 8999999999999999765322 22346889999999999999999999999
Q ss_pred cEEEee
Q psy17188 418 NLSIWD 423 (504)
Q Consensus 418 ~i~iwd 423 (504)
.|++|+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999996
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-44 Score=335.76 Aligned_cols=293 Identities=17% Similarity=0.284 Sum_probs=237.9
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
.|+..|++++|||||++|++++ |+.|++|+..++.....+. ....+|...|.+++|+|++++ ++++.||+|
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v 117 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKGI-LVASDSGAV 117 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTEE-EEEETTSCE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCCE-EEEECCCEE
Confidence 6999999999999999999987 4679999987764433332 223368889999999999865 456789999
Q ss_pred EEEeCCCCCccc--eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188 184 SIWDLASPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL 260 (504)
Q Consensus 184 ~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 260 (504)
+|||+.+++... .....+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|++++. ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 999998766433 234557899999999999999999999999999999999999999999999999999999875 78
Q ss_pred EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
++++.|++|++||+++++.. .......+...+.+++|+|+ +.+|++++.|+.|++||++++ ...
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~-------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--~~~ 262 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPA-------------TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--DSA 262 (357)
T ss_dssp EEEETTSCEEECCTTSSSCB-------------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--GGC
T ss_pred eeeccCCceEEEECCCCcee-------------eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC--cEe
Confidence 99999999999999987631 13334456778999999997 568899999999999999876 455
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCc
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASN 418 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~ 418 (504)
..+..+...|.+++|+|++.. ++++++.|+.|++||++..+ ......|...|++++|+| ++++|++++.||.
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~-~lasgs~D~~i~iwd~~~~~------~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSP-FLASISEDCTVAVLDADFSE------VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTSCE------EEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEEeccceeEEEEEEcCCCCC-EEEEEeCCCEEEEEECCCCc------EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 667788889999999999865 78899999999999987642 223346889999999998 8999999999999
Q ss_pred EEEeeCCCC
Q psy17188 419 LSIWDLASP 427 (504)
Q Consensus 419 i~iwd~~~~ 427 (504)
|++|++.+.
T Consensus 336 v~iW~~~~~ 344 (357)
T 4g56_B 336 VLHHHLPSE 344 (357)
T ss_dssp EEEEECC--
T ss_pred EEEEECCCC
Confidence 999999754
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-44 Score=329.25 Aligned_cols=296 Identities=18% Similarity=0.342 Sum_probs=239.9
Q ss_pred cceeee-cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188 105 RQINTL-SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 181 (504)
Q Consensus 105 ~~~~~~-~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 181 (504)
....++ +|.+.|++++|+|++ ++|++++ |++|++|++.............+.+|...|.+++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 344455 899999999999965 8899888 9999999987543222222334458999999999999999999999999
Q ss_pred cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-----
Q psy17188 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD----- 256 (504)
Q Consensus 182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~----- 256 (504)
+|++||+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||++ ++.+..+.+|...|.++.|.|.
T Consensus 88 ~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 88 TLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred EEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 99999998765 366788999999999999999999999999999999986 5567788899999999999984
Q ss_pred -CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC
Q psy17188 257 -GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 335 (504)
Q Consensus 257 -~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 335 (504)
+..|++++.|+.|++||+++.+. ......|...|.+++|+|++++|++++.|+.|++||+.+.+
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQI---------------EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEE---------------EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CccEEEEEeCCCEEEEEECCcchh---------------heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 44899999999999999998764 33445788899999999999999999999999999998652
Q ss_pred ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC
Q psy17188 336 PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 415 (504)
Q Consensus 336 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~ 415 (504)
.. ..+ .....|.+++|+|++.+|++++.
T Consensus 230 ~~--~~~--------------------------------------------------~~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 230 AM--YTL--------------------------------------------------SAQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EE--EEE--------------------------------------------------ECCSCEEEEEECSSSSEEEEEET
T ss_pred EE--EEe--------------------------------------------------cCCCcEEEEEEcCCCCEEEEEcC
Confidence 11 110 01234668899999988888765
Q ss_pred CCcEEEeeCCCCCcceeec------ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188 416 ASNLSIWDLASPTPRIKAE------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~------~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
+ .+++|++.......... ...+...+.+++|+|||++|++|+.||.|+|||+.++
T Consensus 258 ~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 258 T-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp T-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred C-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 4 48999887543322221 1234556889999999999999999999999998764
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.2e-44 Score=325.57 Aligned_cols=289 Identities=19% Similarity=0.352 Sum_probs=238.7
Q ss_pred eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEE
Q psy17188 107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184 (504)
Q Consensus 107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 184 (504)
..++ +|.+.|.+++|+|++++|++++ |++|++||++++. .+.. ...|...|.+++|+|++++|++|+.|++|+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~--~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRS--IQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEE--EECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEE--eeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 3445 8999999999999999999998 9999999998753 2222 236889999999999999999999999999
Q ss_pred EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEcc-CCCEEEE
Q psy17188 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISA-DGTKLWT 262 (504)
Q Consensus 185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s 262 (504)
+||+.+++. ...+.+|...|.+++|+|++++|++++.|++|++||++++ .....+.+|...|.+++|+| ++.+|++
T Consensus 81 vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 81 VFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEECCCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 999997653 6678899999999999999999999999999999999887 66678899999999999999 6789999
Q ss_pred EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188 263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 340 (504)
++.|++|++||++++... ......+...+..+.|+| ++++|++++.|+.|++||+++++. ..
T Consensus 159 gs~D~~v~iwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~--~~ 222 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPN--------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC--VA 222 (304)
T ss_dssp EETTSEEEEEETTCSSCS--------------EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE--EE
T ss_pred EeCCCeEEEEECCCCCcc--------------ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc--ce
Confidence 999999999999876521 111223456788888886 678999999999999999876521 11
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 420 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~ 420 (504)
.+ ..|...|.+++|+|++++|++++.||.|+
T Consensus 223 ~~-------------------------------------------------~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~ 253 (304)
T 2ynn_A 223 TL-------------------------------------------------EGHMSNVSFAVFHPTLPIIISGSEDGTLK 253 (304)
T ss_dssp EE-------------------------------------------------ECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ee-------------------------------------------------CCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence 11 13556688999999999999999999999
Q ss_pred EeeCCCCCcceeecccCCCCceeEEEECCCCC--EEEEeeCCCcEEEEEcCC
Q psy17188 421 IWDLASPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~--~l~s~~~dg~i~iwd~~~ 470 (504)
+||+++++.. ..+..+...+.+++|+|++. ++++|+.|| +.+|++.+
T Consensus 254 iWd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 254 IWNSSTYKVE--KTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEETTTCCEE--EEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEECCCCcee--eeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999977544 44566778899999999875 577777666 78888765
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-44 Score=342.77 Aligned_cols=335 Identities=15% Similarity=0.213 Sum_probs=270.8
Q ss_pred CCCCCccccceeeecCCCcEEEEEEcCCCc-EEEEec-CCeEEEEeC----CCCCCCC---ceeeee--e------cCCC
Q psy17188 97 GPGIPRHARQINTLSHGEVVCAVTISNPTK-YVYTGG-KGCVKVWDI----SQPGSKT---PVSQLD--C------LQRD 159 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~----~~~~~~~---~~~~~~--~------~~~~ 159 (504)
.+......+.+....|.+.|++++|+|+++ +|++++ |+.|++|++ .++.... ....+. . .+|.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (425)
T 1r5m_A 29 SDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT 108 (425)
T ss_dssp -----CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C
T ss_pred cccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC
Confidence 344444455556668889999999999999 999988 999999999 7654210 111111 1 1257
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 239 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 239 (504)
+.|++++|+|++++|++++.|+.|++||.. ......+..|...|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENGELRLWNKT---GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 799999999999999999999999999933 23466778899999999999999999999999999999999999999
Q ss_pred eecCCCCC---------------eEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188 240 QFQGHTDG---------------ASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304 (504)
Q Consensus 240 ~~~~h~~~---------------v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (504)
.+..+... +.+++|++++ .+++++.|+.|++||+++++. ......+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~---------------~~~~~~~~~~ 249 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTP---------------TGKLIGHHGP 249 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSC---------------SEEECCCSSC
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCce---------------eeeeccCCCc
Confidence 99888777 9999999975 689999999999999998753 2333467788
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 384 (504)
+.+++|+|++++|++++.|+.|++||+++.+... .+
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~------------------------------------------ 285 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN--CF------------------------------------------ 285 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE--EE------------------------------------------
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccce--Ee------------------------------------------
Confidence 9999999999999999999999999987642110 00
Q ss_pred cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 464 (504)
Q Consensus 385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~ 464 (504)
..+...|.+++|+|++ ++++++.|+.|++||+++++. ...+..|...+.+++|+|++++|++++.||.|+
T Consensus 286 -------~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 286 -------YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL--LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp -------CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE--EEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -------cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE--eEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 1245567899999999 999999999999999987654 344556778899999999999999999999999
Q ss_pred EEEcCCcc--------------------eEEEEeecCC--ceEEEEEccCCCEEEEecCCCC
Q psy17188 465 VWDLHNQT--------------------LVRQFQGHTD--GASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 465 iwd~~~~~--------------------~~~~~~~h~~--~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+||+.+++ .+..+..|.. .|++++|+|++++|++++.||+
T Consensus 356 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 356 VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp EEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence 99999988 8899999976 9999999999999999999985
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.6e-43 Score=328.52 Aligned_cols=294 Identities=18% Similarity=0.312 Sum_probs=254.8
Q ss_pred ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188 195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~ 274 (504)
....+.+|...|++++|+|++++|++++.|++|++||..+++....+..|...|.+++|+|++..|++++.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
...... ...........|...|.+++|+|+++.|++++.|++|++||++++ .....+..|...+.++++
T Consensus 136 ~~~~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 136 TFDKNE---------NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--QLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp CCCTTC---------CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEE
T ss_pred eccccc---------cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEcCCCCCeEEEEE
Confidence 754210 001112334468889999999999999999999999999999887 455667788889999999
Q ss_pred CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec
Q psy17188 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE 434 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~ 434 (504)
+|+....++++++.|+.|++||++..... .....|...|.+++|+|++.+|++++.|+.|++||++..+......
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCV-----QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS 279 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEE-----EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 98644338999999999999999875322 2234678899999999999999999999999999999776555444
Q ss_pred ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 435 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 435 ~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
...+...+.+++|+|++++|++++.|+.|++||+.+++.+..+.+|.+.|++++|+||+++|++|+.||+
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 4445567899999999999999999999999999999999999999999999999999999999999985
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=330.02 Aligned_cols=291 Identities=14% Similarity=0.204 Sum_probs=233.7
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC---------CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 227 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 227 (504)
.++..|.+++|+|||++|++++ |+++++||... ...........+...|.+++|+|++ .|++++.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4677899999999999999887 67777776321 0111122333456779999999985 68899999999
Q ss_pred EEEECCCCeEEEe----ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 228 AVWDLHNQTLVRQ----FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 228 ~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
+|||+++++.+.. +.+|.+.|++++|+|++++|++++.|++|++||+++++. ......|..
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~---------------~~~~~~h~~ 170 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV---------------LSSYRAHAA 170 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---------------EEEECCCSS
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEEcCcCC
Confidence 9999998865433 458999999999999999999999999999999999875 334457889
Q ss_pred ceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188 304 YIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS 382 (504)
Q Consensus 304 ~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 382 (504)
.|.+++|++++ .+|++++.|++|++||+++++.........+...+.+++|+|++.. ++++++.|+.|++||++....
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~l~sg~~dg~v~~wd~~~~~~ 249 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE-VFVFGDENGTVSLVDTKSTSC 249 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT-EEEEEETTSEEEEEESCC--C
T ss_pred ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCc-ceEEeccCCcEEEEECCCCcE
Confidence 99999999988 4788999999999999998876655555666778999999997665 788999999999999987643
Q ss_pred CCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC-EEEEeeCC
Q psy17188 383 KTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSD 460 (504)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~d 460 (504)
.. ....|...|++++|+|++ ++|++++.|++|++||+++++. ..+.+|...|++++|+|+++ +|++++.|
T Consensus 250 ~~-----~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~---~~~~~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 250 VL-----SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL---FRSQAHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp CE-----EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE---EEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred EE-----EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE---EEEcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 32 234688899999999998 5799999999999999987643 34578999999999999986 57799999
Q ss_pred CcEEEEEcCCcce
Q psy17188 461 GNIAVWDLHNQTL 473 (504)
Q Consensus 461 g~i~iwd~~~~~~ 473 (504)
++|++|++.+...
T Consensus 322 ~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 322 HQVVHHVVPTEPL 334 (344)
T ss_dssp SCEEEEECCC---
T ss_pred CeEEEEECCCCCC
Confidence 9999999987543
No 31
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-43 Score=367.45 Aligned_cols=361 Identities=17% Similarity=0.273 Sum_probs=296.5
Q ss_pred eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEE
Q psy17188 107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184 (504)
Q Consensus 107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 184 (504)
.+.+ +|.+.|.+++|+|++++|++++ ||.|+|||+.++. .+..+ ..|...|.+++|+|++++|++++.||.|+
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV---EVRSI--QVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEE--ECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc---eEEEE--ecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3444 8999999999999999999998 9999999998753 22222 37899999999999999999999999999
Q ss_pred EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEcc-CCCEEEE
Q psy17188 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISA-DGTKLWT 262 (504)
Q Consensus 185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s 262 (504)
+||+.+++. ...+.+|...|.+++|+|++++|++++.||.|++||++++ .....+.+|...|.+++|+| +++.|++
T Consensus 81 vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 81 VFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 999987653 5667889999999999999999999999999999999987 77888899999999999999 8889999
Q ss_pred EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188 263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 340 (504)
++.||.|++||+.++... ......+...+..++|+| ++++|++++.||.|++||+.++ ....
T Consensus 159 ~~~dg~v~vwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~ 222 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPN--------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--SCVA 222 (814)
T ss_dssp EETTSEEEEEETTCSSCS--------------EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT--EEEE
T ss_pred EeCCCeEEEEECCCCcce--------------eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC--cEEE
Confidence 999999999999876531 111223347799999999 9999999999999999999876 4456
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC--EEEEeeCCCc
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASN 418 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~l~~~~~dg~ 418 (504)
.+..|...+.+++|+|+++ ++++++.|+.|++||+....... ....+...+.+++|+|++. +++++ .++.
T Consensus 223 ~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~ 294 (814)
T 3mkq_A 223 TLEGHMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSSTYKVEK-----TLNVGLERSWCIATHPTGRKNYIASG-FDNG 294 (814)
T ss_dssp EEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCSEEE-----EECCSSSSEEEEEECTTCGGGEEEEE-ETTE
T ss_pred EEcCCCCCEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCcEEE-----EeecCCCcEEEEEEccCCCceEEEEE-eCCC
Confidence 6677888999999999998 89999999999999997643221 2234567899999999987 45555 4666
Q ss_pred EEEeeCCCCCcceee-----------------------------------------cccCCCCceeEEEECCCCCEEEEe
Q psy17188 419 LSIWDLASPTPRIKA-----------------------------------------ELTSSAPACYALAISPDSKVCFSC 457 (504)
Q Consensus 419 i~iwd~~~~~~~~~~-----------------------------------------~~~~~~~~v~~l~~s~~~~~l~s~ 457 (504)
+.+|++......... ....+...+.+++|+|++++|+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~ 374 (814)
T 3mkq_A 295 FTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVV 374 (814)
T ss_dssp EEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEE
T ss_pred EEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEe
Confidence 888887643221111 112334457899999999999999
Q ss_pred eCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 458 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 458 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+ |+.+.+|++...... +.+.+.+++|+||+++|++++.||+
T Consensus 375 ~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~ 415 (814)
T 3mkq_A 375 G-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQ 415 (814)
T ss_dssp E-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCC
T ss_pred c-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCc
Confidence 8 899999998654332 3467889999999999999999874
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-43 Score=323.79 Aligned_cols=294 Identities=19% Similarity=0.355 Sum_probs=244.9
Q ss_pred ecCCCCceEEEEE-----cc-CCCEEEEecCCCcEEEEeCCCCCc-----cceeeeecCcCceEEEEECCCCCEEEEEeC
Q psy17188 155 CLQRDNYIRSVKL-----LP-DGRTLIVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAISPDSKVCFSCCS 223 (504)
Q Consensus 155 ~~~~~~~v~~~~~-----s~-~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 223 (504)
+.+|.+.|++++| ++ ++++|++|+.|++|++||+...+. .....+.+|...|.+++|+|++.+|++++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 4489999999999 77 999999999999999999976432 234567899999999999999999999999
Q ss_pred CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+....... ......|..
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~-------------~~~~~~~~~ 163 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS-------------SAEKENHSD 163 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE-------------CCTTTSCSS
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee-------------eecccCCCc
Confidence 9999999999999999999999999999999999999999999999999998543211 111235677
Q ss_pred ceEEEEEcCCC----------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188 304 YIRSVKLLPDG----------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK 373 (504)
Q Consensus 304 ~v~~~~~~~~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~ 373 (504)
.+.+++|+|++ .+|++++.|+.|++||... .....+..|...+.+++|+|+++ ++++++.|+.|+
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~g~--~l~sgs~dg~v~ 238 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPNGK--YIATGGKDKKLL 238 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTTSS--EEEEEETTCEEE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCCCC--EEEEEcCCCeEE
Confidence 89999999987 7899999999999999432 45556778889999999999998 899999999999
Q ss_pred EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-----------cCCCCce
Q psy17188 374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----------TSSAPAC 442 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v 442 (504)
+||+........ ...+...|.+++|+|++++++++ .|+.|++||+.+.+......+ .+|...|
T Consensus 239 iwd~~~~~~~~~-----~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 312 (343)
T 2xzm_R 239 IWDILNLTYPQR-----EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC 312 (343)
T ss_dssp EEESSCCSSCSE-----EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE
T ss_pred EEECCCCcccce-----eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce
Confidence 999954322111 11245569999999999988765 577899999987665432222 2577789
Q ss_pred eEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 443 YALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 443 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
++++|+|++++|++|+.||.|++|++++++
T Consensus 313 ~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 313 TSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 999999999999999999999999987653
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-45 Score=349.59 Aligned_cols=342 Identities=13% Similarity=0.202 Sum_probs=273.7
Q ss_pred ecCCCcEEEEEEcCCCc-EEEEe----------c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe
Q psy17188 110 LSHGEVVCAVTISNPTK-YVYTG----------G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 177 (504)
Q Consensus 110 ~~h~~~V~~v~~s~~~~-~l~~~----------~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 177 (504)
+.+...|.+++|+|+++ +|+++ + |+.|+|||+.++.....+. ...|...|.+++|+|++++|+++
T Consensus 9 l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~ 85 (416)
T 2pm9_A 9 LAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIA---SLQVDSKFNDLDWSHNNKIIAGA 85 (416)
T ss_dssp -CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSC---CCCCSSCEEEEEECSSSSCEEEE
T ss_pred HhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEE---EEecCCceEEEEECCCCCeEEEE
Confidence 34556789999999987 99998 6 8999999998764322222 23688999999999999999999
Q ss_pred cCCCcEEEEeCCCC--CccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCe------EEEe---ecCCC
Q psy17188 178 GEASNLSIWDLASP--TPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQT------LVRQ---FQGHT 245 (504)
Q Consensus 178 ~~dg~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~---~~~h~ 245 (504)
+.|+.|++||+... .......+..|...|.+++|+|+ +++|++++.|+.|++||+.+++ .... +..|.
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 99999999999862 12346677889999999999998 8899999999999999999876 3333 46799
Q ss_pred CCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCC
Q psy17188 246 DGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEA 323 (504)
Q Consensus 246 ~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 323 (504)
..|.+++|+|+ +.+|++++.|+.|++||+++++.... +.. ......+...+.+++|+|++ .++++++.|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIH-LSY--------TSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEE-ECC--------CCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceE-Eec--------cccccccCCceEEEEECCCCCCEEEEEECC
Confidence 99999999998 78999999999999999998864211 000 00001226789999999997 689999999
Q ss_pred C---cEEEEeCCCCCccceeeec-cCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 324 S---NLSIWDLASPTPRIKAELT-SSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 324 g---~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
+ .|++||+++.. .....+. .|...+.+++|+| ++. ++++++.|+.|++||++..... .....|...|
T Consensus 237 ~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~--~l~s~~~dg~v~~wd~~~~~~~-----~~~~~~~~~v 308 (416)
T 2pm9_A 237 DNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEH--LLLSSGRDNTVLLWNPESAEQL-----SQFPARGNWC 308 (416)
T ss_dssp SSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSS--CEEEEESSSEEEEECSSSCCEE-----EEEECSSSCC
T ss_pred CCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCC--eEEEEeCCCCEEEeeCCCCccc-----eeecCCCCce
Confidence 8 99999998753 2334455 7888999999999 666 7999999999999999875322 2223577889
Q ss_pred EEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeec---------------------------------ccCCCCceeE
Q psy17188 399 RSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAE---------------------------------LTSSAPACYA 444 (504)
Q Consensus 399 ~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------------------------~~~~~~~v~~ 444 (504)
.+++|+|++ .+|++++.|+.|++||+.+........ ...+...+++
T Consensus 309 ~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (416)
T 2pm9_A 309 FKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPA 388 (416)
T ss_dssp CCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCC
T ss_pred EEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccc
Confidence 999999999 899999999999999998765332210 0114566778
Q ss_pred EEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188 445 LAISPDSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 445 l~~s~~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
++|+|||++|++++.|+.|+||++.+.
T Consensus 389 ~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 389 AHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred eEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 999999999999999999999999764
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-43 Score=332.04 Aligned_cols=314 Identities=24% Similarity=0.441 Sum_probs=245.5
Q ss_pred ceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeee-------------ecCCCCceEEEEEccCCC
Q psy17188 106 QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLD-------------CLQRDNYIRSVKLLPDGR 172 (504)
Q Consensus 106 ~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~-------------~~~~~~~v~~~~~s~~~~ 172 (504)
....++|.+.|++++|+|+|++|++++++.++||++.++.....+.... ...+...|.+++|+|+++
T Consensus 57 ~~~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred eEEecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 3455689999999999999999999999999999998764322211100 001234599999999999
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEE
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 252 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 252 (504)
+|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+++
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 213 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA 213 (393)
T ss_dssp EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence 99999999999999998654 456788999999999999999999999999999999999999888887 677899999
Q ss_pred Ecc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188 253 ISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 331 (504)
Q Consensus 253 ~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 331 (504)
|+| ++++|++++.|+.|++||+++++.... +... ......|...|.+++|+|++++|++++.|+.|++||+
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~-~~~~-------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVER-LDSE-------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEE-EC-------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEe-eccc-------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 999 899999999999999999998864211 0000 1112457788999999999999999999999999999
Q ss_pred CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188 332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411 (504)
Q Consensus 332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 411 (504)
++......... +.. .... .....|...|.+++|+|++++|+
T Consensus 286 ~~~~~~~~~~~-------------~~~----------~~~~----------------~~~~~h~~~v~~~~~~~~~~~l~ 326 (393)
T 1erj_A 286 QNANNKSDSKT-------------PNS----------GTCE----------------VTYIGHKDFVLSVATTQNDEYIL 326 (393)
T ss_dssp --------------------------------------CEE----------------EEEECCSSCEEEEEECGGGCEEE
T ss_pred CCCCCcccccC-------------CCC----------Ccce----------------EEEecccCcEEEEEECCCCCEEE
Confidence 76532110000 000 0000 11124677899999999999999
Q ss_pred EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC------CCCEEEEeeCCCcEEEEEcCCc
Q psy17188 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP------DSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~------~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
+++.|+.|++||+.+++.. ..+.+|...|.+++|++ ++++|++|+.||+|+||++...
T Consensus 327 sgs~D~~v~iwd~~~~~~~--~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 327 SGSKDRGVLFWDKKSGNPL--LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEeCCCeEEEEECCCCeEE--EEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999999999999987644 45667889999999986 6889999999999999998643
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.2e-43 Score=323.11 Aligned_cols=317 Identities=18% Similarity=0.265 Sum_probs=265.4
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
-|.+.|.+++|+|+|++++++. ++.+.+|.... ....+...+|...|.+++|+|++++|++++ |+.|++||+.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~ 80 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS 80 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCS-----EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCC-----ccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence 4567899999999999999877 66666664432 223344447999999999999999999998 9999999998
Q ss_pred CCCccc-eeeee--cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEEEc
Q psy17188 190 SPTPRI-KAELT--SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGG 264 (504)
Q Consensus 190 ~~~~~~-~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 264 (504)
+++... ...+. .|...|.+++|+|++++|++++.|+.|++||+++++ ....+..|...|.+++|+|++++|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 764321 22222 788999999999999999999999999999999887 6677888999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS 344 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 344 (504)
.|+.|++||+++++. ......+...+.+++|+|++++|++++.|+.|++||+++.+...
T Consensus 161 ~dg~v~~~d~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~------ 219 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTL---------------VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ------ 219 (337)
T ss_dssp TTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE------
T ss_pred CCCcEEEEeCCCCce---------------eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEe------
Confidence 999999999998864 22334577889999999999999999999999999987652110
Q ss_pred CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188 345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 424 (504)
Q Consensus 345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~ 424 (504)
.+ .+...+.+++|+|++++|++++.++.|++||+
T Consensus 220 -----------------------------~~-----------------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~ 253 (337)
T 1gxr_A 220 -----------------------------QH-----------------DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253 (337)
T ss_dssp -----------------------------EE-----------------ECSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -----------------------------ee-----------------cCCCceEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 00 12345779999999999999999999999999
Q ss_pred CCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 425 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
++.+. .....|...|.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||+
T Consensus 254 ~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 254 NKPDK---YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp TSSCE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred CCCCe---EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCe
Confidence 87653 345678889999999999999999999999999999999888554 58899999999999999999999985
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.3e-42 Score=314.91 Aligned_cols=293 Identities=19% Similarity=0.333 Sum_probs=242.5
Q ss_pred ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
....+ +|.+.|++++|+|++++|++++ |+.|++|++.++.. .. ...+|...|.+++|+|++++|++++.|+.|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~---~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF---EK--TISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE---EE--EECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc---ch--hhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 33444 8999999999999999999988 99999999977532 22 233789999999999999999999999999
Q ss_pred EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188 184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG 263 (504)
Q Consensus 184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 263 (504)
++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++++|+++
T Consensus 90 ~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 90 KIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp EEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 999998765 356778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.|+.|++||+++++... .....+...+..++|+|++++|++++.|+.|++||+++.+. ...+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~ 231 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLK--------------TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYT 231 (312)
T ss_dssp ETTSCEEEEETTTCCEEE--------------EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE--EEEEC
T ss_pred eCCCcEEEEECCCCceee--------------EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--EEEEE
Confidence 999999999999876421 11123456789999999999999999999999999987531 11111
Q ss_pred cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 423 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd 423 (504)
.+... ...+......+++.+|++++.||.|++||
T Consensus 232 ~~~~~----------------------------------------------~~~~~~~~~~~~~~~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 232 GHKNE----------------------------------------------KYCIFANFSVTGGKWIVSGSEDNLVYIWN 265 (312)
T ss_dssp SSCCS----------------------------------------------SSCCCEEEECSSSCEEEECCTTSCEEEEE
T ss_pred ecCCc----------------------------------------------eEEEEEEEEeCCCcEEEEECCCCEEEEEE
Confidence 11100 00111233346788999999999999999
Q ss_pred CCCCCcceeecccCCCCceeEEEECCCCCEEEEee--CCCcEEEEEcC
Q psy17188 424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLH 469 (504)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~--~dg~i~iwd~~ 469 (504)
+.+++. ...+.+|...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 266 ~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 266 LQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTTCCE--EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCchh--hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 997654 455678889999999999999999987 69999999864
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=324.12 Aligned_cols=287 Identities=16% Similarity=0.225 Sum_probs=222.8
Q ss_pred CCCC-ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee-eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188 157 QRDN-YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 234 (504)
Q Consensus 157 ~~~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 234 (504)
+|.. .|.+++|+|++++||+|+.|++|+|||+.+++..... ...+|...|.+++|+|++++|++++.|++|++||+.+
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 6776 8999999999999999999999999999876533222 3368999999999999999999999999999999987
Q ss_pred C--eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188 235 Q--TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP 312 (504)
Q Consensus 235 ~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 312 (504)
+ +.+..+.+|...|.+++|+|++++|++++.|++|++||++++.... .......|...|.+++|+|
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~------------~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE------------CVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE------------EEEEECCCCSCEEEEEECS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE------------EEEEecCcCCCeEEEEECC
Confidence 6 4678899999999999999999999999999999999998764210 0223346778899999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc
Q psy17188 313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL 392 (504)
Q Consensus 313 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 392 (504)
++++|++++.|+.|++||.+..+......+..|...
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~-------------------------------------------- 196 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHEST-------------------------------------------- 196 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--------------------------------------------
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc--------------------------------------------
Confidence 999999999999999999876533333334444444
Q ss_pred cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------------ceeeccc-CCCCceeEEEECCCCCEEEEee
Q psy17188 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------------RIKAELT-SSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
|.+++|+|+|++|++++.|+.|++||...... .....+. .|...|.+++|+|++..|++++
T Consensus 197 -----v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 197 -----VWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC 271 (345)
T ss_dssp -----EEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred -----eEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence 44555555555555555555555555321110 0111122 3677899999999999999999
Q ss_pred CCCcEEEEEcCCcce---------EEEEeecCCceEEEEEccCC-CEEEEecCCCC
Q psy17188 459 SDGNIAVWDLHNQTL---------VRQFQGHTDGASCIDISADG-TKLWTGGLDNT 504 (504)
Q Consensus 459 ~dg~i~iwd~~~~~~---------~~~~~~h~~~v~~~~~s~d~-~~l~s~s~Dgt 504 (504)
.|+.|++|+...+.. .....+|...|++++|+|++ .+|++||.||+
T Consensus 272 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 272 GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 999999999876421 12234789999999999998 59999999986
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-43 Score=321.19 Aligned_cols=301 Identities=14% Similarity=0.157 Sum_probs=235.5
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee-ec-CcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLH 233 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 233 (504)
.+|.+.|.+++|+|+ +|++|+.|++|++||+..+.......+ .. |...|.+++|+|++++|++++.|++|++||+.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 389999999999987 999999999999999987544334444 34 99999999999999999999999999999985
Q ss_pred C-------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188 234 N-------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR 306 (504)
Q Consensus 234 ~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 306 (504)
. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++..... .........|...|.
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~-----------~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE-----------YECISVLQEHSQDVK 157 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC-----------CEEEEEECCCSSCEE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC-----------eEEEEEeccCCCceE
Confidence 3 4567888999999999999999999999999999999999543100 000223456788999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc
Q psy17188 307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV 386 (504)
Q Consensus 307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 386 (504)
+++|+|++++|++++.|++|++||...........+..|...|.+++|+|++....+++++.|+.|++||+.........
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 99999999999999999999999987765456677888999999999999965448999999999999998754221110
Q ss_pred ---ccccc-ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee-ecccCCCC-ceeEEEECC--CCCEEEEee
Q psy17188 387 ---SQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK-AELTSSAP-ACYALAISP--DSKVCFSCC 458 (504)
Q Consensus 387 ---~~~~~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~-~v~~l~~s~--~~~~l~s~~ 458 (504)
..... ..|...|.+++|++++ +|++++.||.|++||..+++.... .....|.. .|++++|+| ++++|++++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 11111 1377889999999765 799999999999999876542222 23355665 899999999 789999999
Q ss_pred CCCcEEEEEcCC
Q psy17188 459 SDGNIAVWDLHN 470 (504)
Q Consensus 459 ~dg~i~iwd~~~ 470 (504)
.||.|+|||+++
T Consensus 317 ~Dg~v~~W~~~~ 328 (330)
T 2hes_X 317 DDGIVNFWSLEK 328 (330)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCcEEEEEecc
Confidence 999999999864
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-42 Score=325.34 Aligned_cols=286 Identities=22% Similarity=0.383 Sum_probs=236.1
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC------------------cCceEEEEECCCCCE
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS------------------APACYALAISPDSKV 217 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~ 217 (504)
.+|...|.+++|+|||++||+|+ ++.+++|++.+++. ...+..+ ...|.+++|+|++++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE--EEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 36899999999999999999986 68999999987654 2233322 224899999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188 218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD 297 (504)
Q Consensus 218 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 297 (504)
|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++.. .
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~----------------~ 201 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS----------------L 201 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----------------E
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE----------------E
Confidence 999999999999999999999999999999999999999999999999999999999988742 2
Q ss_pred ecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188 298 CLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376 (504)
Q Consensus 298 ~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d 376 (504)
...+...+.+++|+| ++++|++++.|+.|++||++++.... .+...
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~--~~~~~------------------------------- 248 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE--RLDSE------------------------------- 248 (393)
T ss_dssp EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE--EEC---------------------------------
T ss_pred EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE--eeccc-------------------------------
Confidence 233556799999999 89999999999999999998753211 11000
Q ss_pred cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc----------ceeecccCCCCceeEEE
Q psy17188 377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP----------RIKAELTSSAPACYALA 446 (504)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~~~~~~v~~l~ 446 (504)
......|...|.+++|+|++++|++++.|+.|++||+++... .....+.+|...|.+++
T Consensus 249 -----------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 317 (393)
T 1erj_A 249 -----------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 317 (393)
T ss_dssp ---------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEE
T ss_pred -----------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEE
Confidence 000124567788999999999999999999999999875422 22344567888999999
Q ss_pred ECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc------CCCEEEEecCCCC
Q psy17188 447 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA------DGTKLWTGGLDNT 504 (504)
Q Consensus 447 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~------d~~~l~s~s~Dgt 504 (504)
|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|++ ++++|++||.||+
T Consensus 318 ~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 318 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 999999999999999999999999999999999999999999986 6889999999985
No 40
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-42 Score=319.86 Aligned_cols=302 Identities=16% Similarity=0.331 Sum_probs=239.6
Q ss_pred cccceeee-cCCCcEEEEEE-----cC-CCcEEEEec-CCeEEEEeCCCCCCCC--ceeeeeecCCCCceEEEEEccCCC
Q psy17188 103 HARQINTL-SHGEVVCAVTI-----SN-PTKYVYTGG-KGCVKVWDISQPGSKT--PVSQLDCLQRDNYIRSVKLLPDGR 172 (504)
Q Consensus 103 ~~~~~~~~-~h~~~V~~v~~-----s~-~~~~l~~~~-d~~i~vw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~ 172 (504)
..+....+ +|.+.|++++| ++ ++++|++++ |++|++||+...+... ........+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 34455556 89999999999 76 899999998 9999999997643221 112234458999999999999999
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee--cCCCCCeEE
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASC 250 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~ 250 (504)
+|++++.|++|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+......... ..|...|.+
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred EEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 99999999999999998765 35678899999999999999999999999999999999854433222 368999999
Q ss_pred EEEccCC----------CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 251 IDISADG----------TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 251 ~~~~~~~----------~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
++|+|++ .+|++++.|+.|++||..... ......|...|.+++|+|++++|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------~~~~~~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQI----------------RYTFKAHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEE----------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCce----------------eEEEcCccccceEEEECCCCCEEEEE
Confidence 9999986 689999999999999954322 23345678899999999999999999
Q ss_pred eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC--ccc------ccccc
Q psy17188 321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT--PVS------QLDCL 392 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~~------~~~~~ 392 (504)
+.|+.|++||+....... ..+ .+...+.+++|+|++. +++ ++.|+.+++||+....... .+. .....
T Consensus 232 s~dg~v~iwd~~~~~~~~-~~~-~~~~~v~~v~~sp~~~--~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQ-REF-DAGSTINQIAFNPKLQ--WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQK 306 (343)
T ss_dssp ETTCEEEEEESSCCSSCS-EEE-ECSSCEEEEEECSSSC--EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBC
T ss_pred cCCCeEEEEECCCCcccc-eee-cCCCcEEEEEECCCCC--EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhc
Confidence 999999999995443222 222 2344799999999986 454 4568889999997654332 111 00112
Q ss_pred cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~ 427 (504)
.|...+.+++|+|+|++|++|+.||.|++|+++++
T Consensus 307 ~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 307 GKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 56778999999999999999999999999998643
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-44 Score=340.67 Aligned_cols=330 Identities=15% Similarity=0.249 Sum_probs=267.4
Q ss_pred CceEEEEEccCCC-EEEEe----------cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188 160 NYIRSVKLLPDGR-TLIVG----------GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228 (504)
Q Consensus 160 ~~v~~~~~s~~~~-~l~~~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 228 (504)
..|.+++|+|+++ +|+++ +.|+.|++||+.+++.........|...|.+++|+|++++|++++.|+.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 4688999999987 99999 889999999998765322233345888999999999999999999999999
Q ss_pred EEECCC----CeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 229 VWDLHN----QTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 229 iwd~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
+||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+++++... .............+..
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~------~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESP------SNYTPLTPGQSMSSVD 166 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCT------TTCCCBCCCCSCCSSC
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccc------ccccccccccccCCCC
Confidence 999988 4588889999999999999998 8999999999999999998875100 0000001112345778
Q ss_pred ceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceeeeccC------CCceeeEEECCCCCCceeeeccCCC---eEE
Q psy17188 304 YIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSS------APACYALAISPDSKSPFFSSHHYKS---CVK 373 (504)
Q Consensus 304 ~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~---~i~ 373 (504)
.+.+++|+|+ +.+|++++.|+.|++||+++.+. ...+..+ ...+.+++|+|++.. ++++++.++ .|+
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHPKNST-RVATATGSDNDPSIL 243 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECSSCTT-EEEEEECCSSSCCCC
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECCCCCC-EEEEEECCCCCceEE
Confidence 8999999998 78999999999999999998743 3333333 678999999999854 788888888 999
Q ss_pred EEecCCCCCCCcccccccc-cCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188 374 VWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 451 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~ 451 (504)
+||++...... .... .|...|.+++|+| ++++|++++.|+.|++||+++++.. ..+..|...|++++|+|++
T Consensus 244 ~~d~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 244 IWDLRNANTPL----QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL--SQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp EEETTSTTSCS----BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE--EEEECSSSCCCCEEECTTC
T ss_pred EEeCCCCCCCc----EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc--eeecCCCCceEEEEECCCC
Confidence 99998753211 1122 5778899999999 9999999999999999999987543 4456778889999999999
Q ss_pred -CEEEEeeCCCcEEEEEcCCcceEEEEee-----------------------------------cCCceEEEEEccCCCE
Q psy17188 452 -KVCFSCCSDGNIAVWDLHNQTLVRQFQG-----------------------------------HTDGASCIDISADGTK 495 (504)
Q Consensus 452 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------------------------h~~~v~~~~~s~d~~~ 495 (504)
++|++++.|+.|++||+.+++....... |...+.+++|+|||++
T Consensus 318 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 397 (416)
T 2pm9_A 318 PDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKL 397 (416)
T ss_dssp TTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEE
T ss_pred CCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeE
Confidence 8999999999999999987764332211 6677889999999999
Q ss_pred EEEecCCCC
Q psy17188 496 LWTGGLDNT 504 (504)
Q Consensus 496 l~s~s~Dgt 504 (504)
|++++.||+
T Consensus 398 la~~~~d~~ 406 (416)
T 2pm9_A 398 VQITPDGKG 406 (416)
T ss_dssp ECBCTTSSC
T ss_pred EEEeCCCCe
Confidence 999999985
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-42 Score=318.22 Aligned_cols=301 Identities=20% Similarity=0.245 Sum_probs=231.1
Q ss_pred cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188 105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 182 (504)
Q Consensus 105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 182 (504)
+.+..+ +|.+.|.+++|+++ +|++++ |++|++||+..+.. .....+....|...|.+++|+|++++|++++.|++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 345555 89999999999988 788877 99999999976421 22222222248999999999999999999999999
Q ss_pred EEEEeCCCCC-----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEeecCCCCCeEEEEE
Q psy17188 183 LSIWDLASPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----QTLVRQFQGHTDGASCIDI 253 (504)
Q Consensus 183 i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~ 253 (504)
|++||+.... ......+.+|...|.+++|+|++++|++++.|++|++||++. .+++..+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 9999986421 234556789999999999999999999999999999999943 3677888999999999999
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeC
Q psy17188 254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDL 331 (504)
Q Consensus 254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~ 331 (504)
+|++++|++++.|++|++||..++.... ......|...|.+++|+|+ +.+|++++.|++|++||+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~-------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWEC-------------VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEE-------------EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeE-------------EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 9999999999999999999987763211 2334568889999999998 778999999999999998
Q ss_pred CCCCc------cceeeecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC-ceEEEEE
Q psy17188 332 ASPTP------RIKAELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKL 403 (504)
Q Consensus 332 ~~~~~------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 403 (504)
+.... .....+.. |...|.+++|++++ ++++++.|+.|++||...+... ........|.. .|.+++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~---~l~s~~~dg~v~iw~~~~~~~~--~~~~~~~~h~~~~v~~v~~ 303 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG---LIASVGADGVLAVYEEVDGEWK--VFAKRALCHGVYEINVVKW 303 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS---CEEEEETTSCEEEEEEETTEEE--EEEEESCTTTTSCEEEEEE
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCC---EEEEEeCCCEEEEEEcCCCceE--EEeccccccccceEEEEEE
Confidence 65421 12222333 78899999999665 6899999999999998643210 01111234555 8999999
Q ss_pred cC--CCCEEEEeeCCCcEEEeeCCC
Q psy17188 404 LP--DGRTLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 404 s~--~g~~l~~~~~dg~i~iwd~~~ 426 (504)
+| ++++|++++.||.|++||++.
T Consensus 304 ~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 304 LELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp C-----CCEEEEETTSEEEEEEC--
T ss_pred ecCCCceEEEEecCCCcEEEEEecc
Confidence 99 789999999999999999864
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-43 Score=330.26 Aligned_cols=307 Identities=20% Similarity=0.349 Sum_probs=252.6
Q ss_pred cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW 261 (504)
Q Consensus 182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 261 (504)
.+..|+... ......+.+|...|++++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|+
T Consensus 47 ~~~~~~~~~--~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 47 TAVSFNPTD--LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GCCCCCCCC--CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccccccce--eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 344555543 334677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188 262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~ 340 (504)
+++.|+.+++||+.+.... ............|...+.++.|.|+ +..|++++.|++|++||+++++.....
T Consensus 125 s~~~d~~v~iw~~~~~~~~--------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADR--------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp ECCSSSCCEEEECCCCSSC--------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred EeeCCCcEEEEECCCCccc--------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 9999999999999764310 0000012234578888999999996 457999999999999999987543322
Q ss_pred e---eccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188 341 E---LTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416 (504)
Q Consensus 341 ~---~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d 416 (504)
. ...|...+.++++++ ++. ++++++.|+.|++||++..... ......|...|.+++|+|++++|++++.|
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~--~l~sgs~D~~v~~wd~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNAN--MFISGSCDTTVRLWDLRITSRA----VRTYHGHEGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCC--EEEEEETTSCEEEEETTTTCCC----CEEECCCSSCCCEEEECTTSSEEEEECSS
T ss_pred ecccCCCCccCeEEEEeecCCCC--EEEEEECCCeEEEEECCCCCcc----eEEECCcCCCeEEEEEecCCCeEEEEcCC
Confidence 1 156788999999987 555 8999999999999999753221 12234688899999999999999999999
Q ss_pred CcEEEeeCCCCCcceeeccc-----CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE----eecCCceEEE
Q psy17188 417 SNLSIWDLASPTPRIKAELT-----SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF----QGHTDGASCI 487 (504)
Q Consensus 417 g~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~~ 487 (504)
+.|++||+++++........ .+...|++++|+|++++|++|+.||.|++||+.+++.+..+ .+|.+.|+++
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 99999999987655443322 22335889999999999999999999999999999988877 5799999999
Q ss_pred EEccCCCEEEEecCCCC
Q psy17188 488 DISADGTKLWTGGLDNT 504 (504)
Q Consensus 488 ~~s~d~~~l~s~s~Dgt 504 (504)
+|+|||++|++||.||+
T Consensus 351 ~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 351 GLSSDGSALCTGSWDKN 367 (380)
T ss_dssp EECSSSSEEEEECTTSC
T ss_pred EECCCCCEEEEeeCCCC
Confidence 99999999999999986
No 44
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6e-42 Score=313.46 Aligned_cols=280 Identities=21% Similarity=0.419 Sum_probs=235.2
Q ss_pred eecCCCCceEEEEEccCC-CEEEEecCCCcEEEEeCCCCCc---cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEE
Q psy17188 154 DCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 229 (504)
Q Consensus 154 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 229 (504)
.+.+|.+.|++++|+|++ ++|++|+.|++|++|++..... .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345899999999999965 8999999999999999865332 234567899999999999999999999999999999
Q ss_pred EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++... ......|...+.++.
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~----------------~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC----------------LATLLGHNDWVSQVR 155 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE----------------EEEECCCSSCEEEEE
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe----------------EEEEeccCCcEEEEE
Confidence 9999999999999999999999999999999999999999999997654 233456788899999
Q ss_pred EcCC------CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188 310 LLPD------GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK 383 (504)
Q Consensus 310 ~~~~------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~ 383 (504)
++|. +..+++++.|+.|++||+++.+. ..
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~------------------------------------------- 190 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EA------------------------------------------- 190 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTTEE--EE-------------------------------------------
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcchh--he-------------------------------------------
Confidence 9985 44788888888888888765311 00
Q ss_pred CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188 384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 463 (504)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i 463 (504)
....|...|.+++|+|++++|++++.||.|++||+.+++...... . ...|.+++|+|++.+|++++.++ +
T Consensus 191 ------~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~-~~~v~~~~~sp~~~~la~~~~~~-i 260 (319)
T 3frx_A 191 ------DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--A-QDEVFSLAFSPNRYWLAAATATG-I 260 (319)
T ss_dssp ------EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-CSCEEEEEECSSSSEEEEEETTE-E
T ss_pred ------eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--C-CCcEEEEEEcCCCCEEEEEcCCC-c
Confidence 012456778899999999999999999999999999776544433 2 35799999999999999887655 9
Q ss_pred EEEEcCCcceEEEEee--------cCCceEEEEEccCCCEEEEecCCCC
Q psy17188 464 AVWDLHNQTLVRQFQG--------HTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 464 ~iwd~~~~~~~~~~~~--------h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
++|++..+..+..+.. |...+.+++|+|||++|++|+.||+
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 261 KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp EEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce
Confidence 9999998887776643 4567999999999999999999985
No 45
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.8e-42 Score=312.42 Aligned_cols=289 Identities=19% Similarity=0.327 Sum_probs=246.7
Q ss_pred ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188 193 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW 272 (504)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w 272 (504)
......+.+|...|++++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188 273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 352 (504)
Q Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~ 352 (504)
|+++++. ......|...|.+++|+|++++|++++.|+.|++||++++ .....+..|...+.++
T Consensus 93 d~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 93 DVSSGKC---------------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAV 155 (312)
T ss_dssp ETTTCCE---------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEE
T ss_pred ECCCCcE---------------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--EEEEEecCCCCcEEEE
Confidence 9998864 2334567888999999999999999999999999999876 4456677788899999
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
+|+|+++ ++++++.|+.|++||++........ ...+...+..++|+|++++|++++.|+.|++||+++++....
T Consensus 156 ~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 156 HFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTL----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp EECTTSS--EEEEEETTSCEEEEETTTCCEEEEE----CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEcCCCC--EEEEEeCCCcEEEEECCCCceeeEE----eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 9999998 8999999999999999865322111 124566789999999999999999999999999998765444
Q ss_pred ecccCCCCc-eeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec--CCCC
Q psy17188 433 AELTSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNT 504 (504)
Q Consensus 433 ~~~~~~~~~-v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s--~Dgt 504 (504)
......... +......+++++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++ .|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~ 304 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 304 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCC
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCcc
Confidence 332222222 22333446889999999999999999999999999999999999999999999999997 5764
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.7e-43 Score=335.39 Aligned_cols=339 Identities=15% Similarity=0.167 Sum_probs=266.2
Q ss_pred cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc
Q psy17188 115 VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP 193 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 193 (504)
.+++++|+|++++|++++ |+.|++||+.+......+. .+ ..+....|++++++|++++.|+.|++||+.+++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 130 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK-----RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL- 130 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC-----SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE-
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe-----cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc-
Confidence 345789999999999998 9999999998754333222 23 455666789999999999999999999998654
Q ss_pred cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273 (504)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd 273 (504)
....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 131 -~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 131 -QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp -EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred -eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 3455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188 274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353 (504)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~ 353 (504)
+++++.... ......+...+.++++.+.+... ....+...+.+++
T Consensus 210 ~~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~-----------------------~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 210 CGTGTTIHT------------FNRKENPHDGVNSIALFVGTDRQ-----------------------LHEISTSKKNNLE 254 (420)
T ss_dssp TTTTEEEEE------------ECBTTBTTCCEEEEEEEECCCSS-----------------------CGGGCCCCCCTTC
T ss_pred CCCCceeEE------------eecCCCCCCCccEEEEecCCcce-----------------------eeecccCcccceE
Confidence 998874211 01111345667777776543211 1122334777888
Q ss_pred ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCCCccee
Q psy17188 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
|+|+++ ++++++.|+.|++||++........ ...+...|.+++|+|+++ +|++++.||.|++||+++++....
T Consensus 255 ~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 255 FGTYGK--YVIAGHVSGVITVHNVFSKEQTIQL----PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp SSCTTE--EEEEEETTSCEEEEETTTCCEEEEE----CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred EcCCCC--EEEEEcCCCeEEEEECCCCceeEEc----ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 888887 7888888999999998765322111 224678899999999999 999999999999999998754333
Q ss_pred ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc---------ceEEEEeecCCceEEEEEccCCC---EEEEec
Q psy17188 433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISADGT---KLWTGG 500 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~s~d~~---~l~s~s 500 (504)
.....+...++++.+ +++++|++++.|+.|++|++.+. .....+..|.+.|.+++|+||++ .|+++|
T Consensus 329 ~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 329 EFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp EEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred hhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 223336667888855 57889999999999999998873 22334567889999999999999 666666
Q ss_pred CCC
Q psy17188 501 LDN 503 (504)
Q Consensus 501 ~Dg 503 (504)
.+|
T Consensus 408 ~~g 410 (420)
T 3vl1_A 408 KNN 410 (420)
T ss_dssp TTT
T ss_pred CCc
Confidence 665
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.1e-42 Score=321.85 Aligned_cols=307 Identities=15% Similarity=0.170 Sum_probs=243.9
Q ss_pred ceeee-cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCC
Q psy17188 106 QINTL-SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEAS 181 (504)
Q Consensus 106 ~~~~~-~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg 181 (504)
....+ +|.+.|++++|+|++ ++|++++ |+.|+|||+.++. ....+...+|...|.+++|+| ++++|++++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN---KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT---CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc---cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 34445 899999999999998 8999988 9999999998753 233334447999999999999 789999999999
Q ss_pred cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL 260 (504)
Q Consensus 182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 260 (504)
.|++||+.+...........|...|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 999999986433222223345588999999999999999999999999999 5778889999999999999999998 99
Q ss_pred EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
++++.|+.|++||+++++.. ........+...|.+++|+| ++++|++++.|+.|++||+++.+....
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDK------------NSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEEETTSEEEEEEGGGCCST------------TCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred EEEeCCCEEEEEeCCCCCcc------------cceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 99999999999999873210 00223336788999999999 999999999999999999987754322
Q ss_pred eeecc-----CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188 340 AELTS-----SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414 (504)
Q Consensus 340 ~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 414 (504)
..... +...+. ..|+| ...+..++|+|++++ +++
T Consensus 289 ~~~~~~~~~~~~~~~~-~~~~p--------------------------------------~~~~~~~~~s~dg~~--s~s 327 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIK-ATWHP--------------------------------------MYDLIVAGRYPDDQL--LLN 327 (383)
T ss_dssp EEECCBCCCTTSCCCC-CEECS--------------------------------------SSSEEEEECBCCTTT--CTT
T ss_pred cccccccccccccceE-EeccC--------------------------------------CCCceEEEecCCccc--ccC
Confidence 22111 111111 12222 234557889999988 889
Q ss_pred CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
.|+.|++||+.+++.........+...+..++|+|++++|++++ ||.|+|||+++
T Consensus 328 ~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 328 DKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 99999999999887766665555667788889999999999997 99999999874
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9e-41 Score=309.48 Aligned_cols=305 Identities=19% Similarity=0.362 Sum_probs=246.5
Q ss_pred Cccccceeee-cCCCcEEEEEEcCC-CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe
Q psy17188 101 PRHARQINTL-SHGEVVCAVTISNP-TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 177 (504)
Q Consensus 101 ~~~~~~~~~~-~h~~~V~~v~~s~~-~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 177 (504)
+.+.+...+| ||.+.|++|+|+|+ +++|++++ |++|+|||+.+.+...........+|...|.+++|+|++++|+++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3344555566 99999999999997 68999988 999999999886655544444556899999999999999999999
Q ss_pred cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEEccC
Q psy17188 178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~ 256 (504)
+.|+.|++|+..... .......+...+..+.+++++++|++++.|+.+++||+..... .....+|...+..++|+++
T Consensus 105 ~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 105 SWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred cccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 999999999998654 3555667777889999999999999999999999999987644 4456779999999999886
Q ss_pred C--CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188 257 G--TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334 (504)
Q Consensus 257 ~--~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 334 (504)
+ .++++++.|+.|++||+++++. ......|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~---------------~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKL---------------KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred CCCcEEEEEcCCCEEEEEECCCCce---------------eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 4 5788999999999999998875 3334567889999999999999999999999999999876
Q ss_pred CccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc----ccccccccCCCceEEEEEcCCCCEE
Q psy17188 335 TPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP----VSQLDCLQRDNYIRSVKLLPDGRTL 410 (504)
Q Consensus 335 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~~~i~~~~~s~~g~~l 410 (504)
+. ...+. +...+..+.++|++. +++++.|+.|++||++....... ........|...|++++|+|||++|
T Consensus 248 ~~--~~~~~-~~~~v~~~~~~~~~~---~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 321 (340)
T 4aow_A 248 KH--LYTLD-GGDIINALCFSPNRY---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL 321 (340)
T ss_dssp EE--EEEEE-CSSCEEEEEECSSSS---EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred ce--eeeec-CCceEEeeecCCCCc---eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence 43 33333 345899999999874 66677899999999976432111 1122234578889999999999999
Q ss_pred EEeeCCCcEEEeeCCCCC
Q psy17188 411 IVGGEASNLSIWDLASPT 428 (504)
Q Consensus 411 ~~~~~dg~i~iwd~~~~~ 428 (504)
++|+.||.|++||+++|+
T Consensus 322 ~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 322 FAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEETTSCEEEEEEEC--
T ss_pred EEEeCCCEEEEEeCCCcC
Confidence 999999999999998875
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-42 Score=330.75 Aligned_cols=341 Identities=11% Similarity=0.066 Sum_probs=246.7
Q ss_pred cccceeeecCCCcEEEEEEcCCC---------cEEEE-------------------ec-CCeEEEEeCCCCCCCCceeee
Q psy17188 103 HARQINTLSHGEVVCAVTISNPT---------KYVYT-------------------GG-KGCVKVWDISQPGSKTPVSQL 153 (504)
Q Consensus 103 ~~~~~~~~~h~~~V~~v~~s~~~---------~~l~~-------------------~~-d~~i~vw~~~~~~~~~~~~~~ 153 (504)
..+....+.+.+.|.+|+|+|++ ++||+ ++ |++|+||++++++.... ...
T Consensus 123 ~~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-~~~ 201 (524)
T 2j04_B 123 GKRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-KVQ 201 (524)
T ss_dssp CCSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE-EEE
T ss_pred CCcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-EEE
Confidence 34444456678888888888875 56665 44 78999999977543211 112
Q ss_pred eecCCCCceEEEEEccC------CCEEEEecCCCcEEEEeCCCCCcc---------ceeeeecCcCceEEEEECCCCCEE
Q psy17188 154 DCLQRDNYIRSVKLLPD------GRTLIVGGEASNLSIWDLASPTPR---------IKAELTSSAPACYALAISPDSKVC 218 (504)
Q Consensus 154 ~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l 218 (504)
....|.+.|.+++|+|+ +.+||+++.||+|++||+..+... ....+.+|...|++++|++++ .|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 22356788999999996 579999999999999999865421 123577899999999999864 89
Q ss_pred EEEeCCCcEEEEECCCCe-EEEeecCCCCCeEEE--EEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188 219 FSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCI--DISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS 294 (504)
Q Consensus 219 ~~~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 294 (504)
++|+.||+|++||++++. ....+.+|...|.++ .|+|++ .+|++++.|++|++||+++++.
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~--------------- 345 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT--------------- 345 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH---------------
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc---------------
Confidence 999999999999999763 455688999999999 567887 8999999999999999987653
Q ss_pred cceecccC--CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeE
Q psy17188 295 QLDCLQRD--NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV 372 (504)
Q Consensus 295 ~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i 372 (504)
......+. ..+.+++|+|+++.+++++.|++|++||+++... ...+..|...|.+++|+|+++ ++++++.|++|
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~--~l~Sgs~Dgtv 421 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHP--MVLAGSADGSL 421 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCC--BCEEEETTTEE
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCC--eEEEEECCCEE
Confidence 11111222 3478999999999999999999999999988643 345667999999999999998 78999999999
Q ss_pred EEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEECCCC
Q psy17188 373 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDS 451 (504)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~~~ 451 (504)
++||.... ............+...+..++|+|+++.+.. .. ...+|+.. ++ .....+.+|...|.+++|+|++
T Consensus 422 ~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g--~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 422 IITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVND--VSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp ECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC---------------CCCSCCCEEECCST
T ss_pred EEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCC--cceeeecCCCceEEEEECCCCC
Confidence 99998643 1111000000112235779999999985532 22 23344332 12 2345567888999999999996
Q ss_pred C---EEEEeeCCCcEEEEEcCC
Q psy17188 452 K---VCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 452 ~---~l~s~~~dg~i~iwd~~~ 470 (504)
+ +||+|+.||.|+||++.-
T Consensus 496 ~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 496 AGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp TTTTEEEEECTTSEEEEEECSC
T ss_pred CccHHHHhhccCceEEEEEccc
Confidence 4 999999999999999864
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-39 Score=302.30 Aligned_cols=293 Identities=20% Similarity=0.409 Sum_probs=246.6
Q ss_pred ecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188 155 CLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230 (504)
Q Consensus 155 ~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 230 (504)
+.+|.+.|++++|+|+ +++|++|+.|++|+|||+.+.+.. ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4589999999999997 689999999999999999865432 345678899999999999999999999999999999
Q ss_pred ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
+............+...+..+.+++++++|++++.|+.+++||....... ......+...+..++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~--------------~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY--------------TVQDESHSEWVSCVRF 179 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE--------------EECSSSCSSCEEEEEE
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE--------------EEEeccccCcccceEE
Confidence 99999999999889999999999999999999999999999998876532 2333456788999999
Q ss_pred cCCC--CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188 311 LPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ 388 (504)
Q Consensus 311 ~~~~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 388 (504)
++++ .++++++.|+.|++||+++. .....+..|...|.+++|+|+++ ++++++.|+.|++||++....
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~Dg~i~iwd~~~~~~------ 249 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGS--LCASGGKDGQAMLWDLNEGKH------ 249 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSS--EEEEEETTCEEEEEETTTTEE------
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCC--ceeeEecCCCCcEEEEEECCCCC--EEEEEeCCCeEEEEEeccCce------
Confidence 8864 57889999999999999876 45566778889999999999998 899999999999999986432
Q ss_pred cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee-------cccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188 389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-------ELTSSAPACYALAISPDSKVCFSCCSDG 461 (504)
Q Consensus 389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~~l~~s~~~~~l~s~~~dg 461 (504)
.....+...+.+++|+|++.++ +++.|+.|++||+++....... ....|...|++++|+||+++|++|+.||
T Consensus 250 ~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 250 LYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred eeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 2223456789999999998755 5567999999999876433222 2346788999999999999999999999
Q ss_pred cEEEEEcCCcc
Q psy17188 462 NIAVWDLHNQT 472 (504)
Q Consensus 462 ~i~iwd~~~~~ 472 (504)
.|+|||+++|+
T Consensus 329 ~v~iW~~~tGt 339 (340)
T 4aow_A 329 LVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEEEC--
T ss_pred EEEEEeCCCcC
Confidence 99999999885
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.2e-41 Score=313.03 Aligned_cols=309 Identities=17% Similarity=0.251 Sum_probs=246.8
Q ss_pred cCCCcEEEEEEcCC---C--cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCEEEEecCCC
Q psy17188 111 SHGEVVCAVTISNP---T--KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGGEAS 181 (504)
Q Consensus 111 ~h~~~V~~v~~s~~---~--~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~dg 181 (504)
+|.+.|++++|+|+ + .++++++++.|++||+.+++....+.......|...|.+++|+|+ +++|++++.||
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 79999999999983 3 366666688999999987655444544444447889999999998 67999999999
Q ss_pred cEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCC
Q psy17188 182 NLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADG 257 (504)
Q Consensus 182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~ 257 (504)
.|++||+.+++. ...+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++
T Consensus 96 ~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 96 IIRIINPITMQC--IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp EEEEECTTTCCE--EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred EEEEEEchhceE--eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 999999987653 566788999999999999 8999999999999999999999999888 7899999999999999
Q ss_pred CEEEEEcCCCeEEEEECCCCceEE-Eee----cCCCCC--------CCcccceecccCCceEEEEEcCCCCEEEEEeCCC
Q psy17188 258 TKLWTGGLDNTVRSWDLREGCVKV-WDI----SQPGSK--------TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 324 (504)
Q Consensus 258 ~~l~s~~~dg~i~~wd~~~~~~~~-~~~----~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 324 (504)
++|++++.||.|++||+++++... +.. ...... ..........+...|.+++|+ ++++++++.|+
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~ 251 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN 251 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC
Confidence 999999999999999999765210 000 000000 000011112378889999998 77999999999
Q ss_pred cEEEEeCCCCCc------------cceeeeccCCCceeeEEECCC--CCCceeeeccCCCeEEEEecCCCCCCC-ccccc
Q psy17188 325 NLSIWDLASPTP------------RIKAELTSSAPACYALAISPD--SKSPFFSSHHYKSCVKVWDISQPGSKT-PVSQL 389 (504)
Q Consensus 325 ~i~v~d~~~~~~------------~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~ 389 (504)
.|++||+.+... .....+..|...+.+++|+|+ ++ ++++++.|+.|++||+....... ....+
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK--MLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS--EEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc--EEEEEecCCcEEEEECCCCCCccccceEE
Confidence 999999987654 335566778889999999999 66 89999999999999998754332 12223
Q ss_pred ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
....+...|.+++|+|++++|++++.||.|++||+.
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 333347899999999999999999999999999985
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-41 Score=325.23 Aligned_cols=353 Identities=12% Similarity=0.181 Sum_probs=260.1
Q ss_pred ccceeee--cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188 104 ARQINTL--SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 179 (504)
Q Consensus 104 ~~~~~~~--~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 179 (504)
.+.+..+ +|.+.|++++|+| ++++|++++ |++|+|||+.+.+............|...|.+++|+|++++|++++.
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 3445555 6899999999999 999999998 99999999876211111111122258999999999999999999999
Q ss_pred CCcEEEEeCC---CCCccce------eee--ec--CcCceEEEE--ECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-
Q psy17188 180 ASNLSIWDLA---SPTPRIK------AEL--TS--SAPACYALA--ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG- 243 (504)
Q Consensus 180 dg~i~iw~~~---~~~~~~~------~~~--~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~- 243 (504)
|+.|++||+. +++.... ..+ .. +...+.++. +++++.+|++++.|+.|++||+++++.+..+.+
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 9999999995 3322111 011 11 455566666 567899999999999999999999999999988
Q ss_pred -CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC----CCCEEE
Q psy17188 244 -HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP----DGRTLI 318 (504)
Q Consensus 244 -h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~ 318 (504)
|...|.+++|+|++++|++++.||.|++||+++++.. ......+...|.+++|+| ++++|+
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~s~~~~~l~ 277 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI--------------RSWSFGDHAPITHVEVCQFYGKNSVIVV 277 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE--------------EEEBCTTCEEEEEEEECTTTCTTEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE--------------EEEecCCCCceEEEEeccccCCCccEEE
Confidence 8999999999999999999999999999999987642 111125567899996664 678999
Q ss_pred EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
+++.|+.|++||++++ .....+..+...+..+.++|+++. +. +.. +....|...|
T Consensus 278 s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--l~----~~~-----------------~~~~~~~~~v 332 (437)
T 3gre_A 278 GGSSKTFLTIWNFVKG--HCQYAFINSDEQPSMEHFLPIEKG--LE----ELN-----------------FCGIRSLNAL 332 (437)
T ss_dssp EESTTEEEEEEETTTT--EEEEEEESSSSCCCGGGGSCBCSS--GG----GCC-----------------CCCCCSGGGG
T ss_pred EEcCCCcEEEEEcCCC--cEEEEEEcCCCCCccceecccccc--cc----cce-----------------ecccccCCce
Confidence 9999999999999877 455566777777888888887763 20 000 1112367789
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 477 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 477 (504)
.+++|+ ++++|++++.|+.|++||+.+++........ .....+....++++..+++.. |+...+......
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 403 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDS 403 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC----------
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCcc
Confidence 999999 7899999999999999999987655444322 234445566677666655544 333444555666
Q ss_pred eecCCceEEEEEccC--CCEEEEecCCCC
Q psy17188 478 QGHTDGASCIDISAD--GTKLWTGGLDNT 504 (504)
Q Consensus 478 ~~h~~~v~~~~~s~d--~~~l~s~s~Dgt 504 (504)
..|.+.|++++|+++ +.+|++|+.||+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp ---CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred cccccceeeEeeeccCCceEEEEEcCCce
Confidence 779999999999998 889999999985
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.5e-40 Score=332.96 Aligned_cols=289 Identities=22% Similarity=0.415 Sum_probs=229.3
Q ss_pred cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188 111 SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 188 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 188 (504)
+|.+.|++++|+|++ ++|++++ |++|++|++...............+|...|.+++|+|++++|++|+.|++|+|||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 899999999999864 7898888 99999999987544333333445589999999999999999999999999999999
Q ss_pred CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCC--CEEEEE
Q psy17188 189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADG--TKLWTG 263 (504)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~--~~l~s~ 263 (504)
.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+......... .+|...|.+++|+|++ ..|+++
T Consensus 460 ~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 460 AAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp TTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 8754 35677899999999999999999999999999999998765443332 4689999999999986 589999
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.|++|++||++++++ ......|...|.+++|+|++++|++++.|+.|++||+++++.. ..+.
T Consensus 538 s~d~~v~vwd~~~~~~---------------~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~--~~~~ 600 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKL---------------RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL--YSLE 600 (694)
T ss_dssp ETTSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE--ECCB
T ss_pred eCCCeEEEEECCCCcE---------------EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE--EEec
Confidence 9999999999998764 3334568889999999999999999999999999999876311 1111
Q ss_pred cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 423 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd 423 (504)
+...+.+++|+|++.+|++++ ++.|++||
T Consensus 601 --------------------------------------------------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd 629 (694)
T 3dm0_A 601 --------------------------------------------------ANSVIHALCFSPNRYWLCAAT-EHGIKIWD 629 (694)
T ss_dssp --------------------------------------------------CSSCEEEEEECSSSSEEEEEE-TTEEEEEE
T ss_pred --------------------------------------------------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEE
Confidence 122355777777776666554 34477777
Q ss_pred CCCCCcceeecc-----------------cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 424 LASPTPRIKAEL-----------------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 424 ~~~~~~~~~~~~-----------------~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
+++++....... ..+...+++++|+||+++|++|+.||.|+||++.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 766543322211 1122347889999999999999999999999985
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-40 Score=318.10 Aligned_cols=329 Identities=17% Similarity=0.161 Sum_probs=253.5
Q ss_pred cCCCCCCCcceEEEECCCCC-cccCCCCCCcccCCCC----Ccccc-----ceeee-c----------CCCcEEEEEEcC
Q psy17188 65 LAGIPGGKPAYSYHVTTDGQ-MQPVPFPPDALIGPGI----PRHAR-----QINTL-S----------HGEVVCAVTISN 123 (504)
Q Consensus 65 ~~~~~~~~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~----~~~~~-----~~~~~-~----------h~~~V~~v~~s~ 123 (504)
+..+...+.|.+++|+|+|+ .++.+..++.+.+|+. ..... ....+ . |.+.|++++|+|
T Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence 33444457899999999998 8888888888888887 44331 23333 2 688999999999
Q ss_pred CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC
Q psy17188 124 PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS 202 (504)
Q Consensus 124 ~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 202 (504)
++++|++++ |+.|++||... ..+. ....|...|.+++|+|++++|++++.|+.|++||+.+++. ...+..+
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~----~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~ 190 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTG----ALLN--VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV--MQHFELK 190 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTS----CEEE--EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE--EEEECCC
T ss_pred CCCEEEEEeCCCeEEEEeCCC----Ceee--eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE--EEEeecc
Confidence 999999988 99999999332 2222 2337899999999999999999999999999999987653 4445555
Q ss_pred cCc---------------eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188 203 APA---------------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 267 (504)
Q Consensus 203 ~~~---------------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 267 (504)
... +.+++|++++ .+++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 555 8899999885 688899999999999999999999999999999999999999999999999
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 347 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 347 (504)
.|++||+++++. ......+...+.+++|+|++ .+++++.|+.|++||+++.+ ....+..+..
T Consensus 270 ~i~i~d~~~~~~---------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~ 331 (425)
T 1r5m_A 270 TLRIWHGGNGNS---------------QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--LLALSIVDGV 331 (425)
T ss_dssp CEEEECSSSBSC---------------SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE--EEEEEECTTC
T ss_pred EEEEEECCCCcc---------------ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc--EeEecccCCc
Confidence 999999988753 23334577889999999999 99999999999999998753 2223333333
Q ss_pred ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~ 427 (504)
. +.+++|+|++++|++++.||.|++||+.+.
T Consensus 332 ~-------------------------------------------------i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 332 P-------------------------------------------------IFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp C-------------------------------------------------EEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred c-------------------------------------------------EEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 4 445555555555555555555555555433
Q ss_pred C------------------cceeecccCCCC--ceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 428 T------------------PRIKAELTSSAP--ACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 428 ~------------------~~~~~~~~~~~~--~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
+ ......+..|.. .|++++|+|++++|++++.||.|++||++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 363 NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 2 113444556655 89999999999999999999999999985
No 55
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.1e-41 Score=320.81 Aligned_cols=306 Identities=16% Similarity=0.207 Sum_probs=228.8
Q ss_pred cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEe
Q psy17188 111 SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWD 187 (504)
Q Consensus 111 ~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~ 187 (504)
+|+..|+||+|+| ++++||+|+ ||.|+|||+.++.. ...+...+|.+.|++++|+| ++++|++++.|++|++||
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC---CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 7999999999999 567899988 99999999987532 23334458999999999998 789999999999999999
Q ss_pred CCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCC
Q psy17188 188 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLD 266 (504)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d 266 (504)
+++...........+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 9865433333333445567899999999999999999999999986 456778899999999999999876 78899999
Q ss_pred CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188 267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA 346 (504)
Q Consensus 267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 346 (504)
++|++||+++.+.. ........|...|.+++|+|++++|++++.|+.|++||+.+.+.... +..|.
T Consensus 273 ~~v~iwd~~~~~~~------------~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~--~~~~~ 338 (435)
T 4e54_B 273 QTVKIWDLRQVRGK------------ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG--LIPHP 338 (435)
T ss_dssp SBCCEEETTTCCSS------------SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE--ECCCC
T ss_pred ceeeEEeccccccc------------ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE--Eeccc
Confidence 99999999876521 01233356788999999999999999999999999999987643222 11111
Q ss_pred C------ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcE
Q psy17188 347 P------ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNL 419 (504)
Q Consensus 347 ~------~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i 419 (504)
. .+....|+|+ ..+..+.+++++..+++++ .++.|
T Consensus 339 ~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~d~~~~~~~~~~~~~i 380 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPR--------------------------------------YNLIVVGRYPDPNFKSCTPYELRTI 380 (435)
T ss_dssp CCCCSSSCCCBCEECSS--------------------------------------SSCEEEECCCCTTSCCSSTTCCCCE
T ss_pred ccccccceeEEEEEcCC--------------------------------------CCEEEEEEcCCCCeEEEEecCCCEE
Confidence 0 0111122222 2233455556665555444 44679
Q ss_pred EEeeCCCCCcceeecccCCCCceeEE-EECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188 420 SIWDLASPTPRIKAELTSSAPACYAL-AISPDSKVCFSCCSDGNIAVWDLHNQTLV 474 (504)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 474 (504)
++||..+++..... ...|...|.++ +|+|++++|++|+ |+.|+||++++++..
T Consensus 381 ~iwd~~~g~~~~~l-~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 381 DVFDGNSGKMMCQL-YDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EEECSSSCCEEEEE-CCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEECCCCcEEEEE-eCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 99999988655433 34566677776 6999999999876 789999999988753
No 56
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.3e-39 Score=311.23 Aligned_cols=322 Identities=17% Similarity=0.344 Sum_probs=265.6
Q ss_pred eeee-cCCCc-EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 107 INTL-SHGEV-VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 107 ~~~~-~h~~~-V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
...+ +|.+. ++++.+ ++++|++++ ||.|++||+.+++. +. ...+|...|.+++|+ +++|++++.|++|
T Consensus 111 ~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~---~~--~~~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKC---LR--TLVGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp CEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE---EE--ECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred eEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcE---EE--EEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 3444 89886 466555 588999888 99999999987632 22 233799999999997 6799999999999
Q ss_pred EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188 184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG 263 (504)
Q Consensus 184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 263 (504)
++||+.+++ ....+.+|...|.++.|+ ++.+++++.|+.|++||+.+++.+..+.+|...|.+++| ++++++++
T Consensus 182 ~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 182 KVWNAETGE--CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp EEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEE
T ss_pred EEEECCcCc--EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEE
Confidence 999998765 366778999999999995 568999999999999999999999999999999999999 67899999
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.||.|++||+++++. ......|...+.++.| +++++++++.|+.|++||+++++ ....+.
T Consensus 256 ~~dg~i~iwd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~ 316 (445)
T 2ovr_B 256 AYDFMVKVWDPETETC---------------LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--CIHTLT 316 (445)
T ss_dssp ETTSCEEEEEGGGTEE---------------EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC--EEEEEC
T ss_pred cCCCEEEEEECCCCcE---------------eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC--EEEEEc
Confidence 9999999999998764 2233457788999999 78899999999999999998874 455667
Q ss_pred cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 423 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd 423 (504)
.|...+.++.+.++ ++++++.|+.|++||++.......+. ....|...|.+++|+ +++|++++.||.|++||
T Consensus 317 ~~~~~v~~~~~~~~----~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 317 GHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQCLQTLQ--GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp CCCSCEEEEEEETT----EEEEEETTSCEEEEETTTCCEEEEEC--STTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred CCcccEEEEEEeCC----EEEEEeCCCeEEEEECCCCcEEEEEc--cCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 78888888887543 89999999999999997653322111 112377889999996 57999999999999999
Q ss_pred CCCCCcceeec---ccCCCCceeEEEECCCCCEEEEeeCCCc----EEEEEcCC
Q psy17188 424 LASPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDGN----IAVWDLHN 470 (504)
Q Consensus 424 ~~~~~~~~~~~---~~~~~~~v~~l~~s~~~~~l~s~~~dg~----i~iwd~~~ 470 (504)
+.+++...... ...+...|++++|+|++.+|++++.||+ |.|||+..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 389 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp TTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99887655442 2467788999999999999999999998 99999875
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-40 Score=317.43 Aligned_cols=328 Identities=16% Similarity=0.185 Sum_probs=261.1
Q ss_pred ceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceee
Q psy17188 74 AYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQ 152 (504)
Q Consensus 74 v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~ 152 (504)
+..++|+|+|+.++.+..++.+.+|+............| ..+....|++++++|++++ |+.|++||+.++. ..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~-- 132 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QR-- 132 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EE--
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---ee--
Confidence 446789999998888888888888877654433222244 6666678999999999998 9999999987642 11
Q ss_pred eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188 153 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 232 (504)
Q Consensus 153 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 232 (504)
.....|...|++++|+|++++|++++.|+.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN--PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC--CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 22237999999999999999999999999999999987654 5667889999999999999999999999999999999
Q ss_pred CCCeEEEeecC---CCCCeEEE---------------------EEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188 233 HNQTLVRQFQG---HTDGASCI---------------------DISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG 288 (504)
Q Consensus 233 ~~~~~~~~~~~---h~~~v~~~---------------------~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~ 288 (504)
++++.+..+.. |...+.++ +|+|++++|++++.||.|++||+++++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-------- 282 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT-------- 282 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE--------
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee--------
Confidence 99999988875 33444444 45788999999999999999999988642
Q ss_pred CCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188 289 SKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH 367 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 367 (504)
......+...+.+++|+|+++ +|++++.||.|++||+++.+.........+...+..+.+. +++ ++++++
T Consensus 283 ------~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~l~s~~ 353 (420)
T 3vl1_A 283 ------IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGA--LFVSSG 353 (420)
T ss_dssp ------EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTE--EEEEET
T ss_pred ------EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCC--EEEEec
Confidence 111234677899999999998 9999999999999999987543333333366677888554 555 899999
Q ss_pred CCCeEEEEecCCCCCCCccc----ccccccCCCceEEEEEcCCCC---EEEEeeCCCcEEEeeCCC
Q psy17188 368 YKSCVKVWDISQPGSKTPVS----QLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 368 ~~~~i~i~d~~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~g~---~l~~~~~dg~i~iwd~~~ 426 (504)
.|+.|++|++.......... ......+...|.+++|+|+++ .+++.+.+|.+.+|++++
T Consensus 354 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 354 FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 99999999998754433222 112345778899999999999 777778899999999874
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-39 Score=310.08 Aligned_cols=308 Identities=19% Similarity=0.382 Sum_probs=261.4
Q ss_pred CCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188 157 QRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 235 (504)
Q Consensus 157 ~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 235 (504)
+|.+.+ .+ +++++++|++|+.||.|++||+.+++ ....+.+|...|.+++|+ +++|++++.||.|++||+.++
T Consensus 116 ~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 116 GHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp CSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred ccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 677765 54 55578999999999999999998765 366778999999999997 569999999999999999999
Q ss_pred eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188 236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 315 (504)
Q Consensus 236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 315 (504)
+.+..+.+|...|.++.|+ ++.+++++.||.|++||+++++. ......|...+.++++ +++
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~ 250 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC---------------LHVLMGHVAAVRCVQY--DGR 250 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE---------------EEEEECCSSCEEEEEE--CSS
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE---------------EEEEcCCcccEEEEEE--CCC
Confidence 9999999999999999996 56899999999999999998864 2333467888999999 788
Q ss_pred EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188 316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD 395 (504)
Q Consensus 316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (504)
++++++.|+.|++||+++. .....+..|...+.++.+ ++. .+++++.|+.|++||+++..... ....|.
T Consensus 251 ~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~--~~~--~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~ 319 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQF--DGI--HVVSGSLDTSIRVWDVETGNCIH-----TLTGHQ 319 (445)
T ss_dssp CEEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEE--CSS--EEEEEETTSCEEEEETTTCCEEE-----EECCCC
T ss_pred EEEEEcCCCEEEEEECCCC--cEeEEecCCCCceEEEEE--CCC--EEEEEeCCCeEEEEECCCCCEEE-----EEcCCc
Confidence 9999999999999999876 455666788889999999 444 79999999999999998754322 223566
Q ss_pred CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188 396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 474 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 474 (504)
..+.++.+ ++++|++++.||.|++||+++++....... ..|...|++++|+ +++|++++.||.|++||+.+++.+
T Consensus 320 ~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 320 SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee
Confidence 77777777 467999999999999999998766554433 2378889999995 689999999999999999999999
Q ss_pred EEE-----eecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 475 RQF-----QGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 475 ~~~-----~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
..+ ..|.+.|++++|+|++.+|++|+.||+
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred eeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 888 468889999999999999999999985
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-39 Score=301.13 Aligned_cols=288 Identities=17% Similarity=0.242 Sum_probs=250.2
Q ss_pred CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEE
Q psy17188 192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRS 271 (504)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~ 271 (504)
.......+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCCcc---------
Q psy17188 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPR--------- 337 (504)
Q Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~--------- 337 (504)
||+.+++. .....+...+.+++|+|+++++++++.+ +.|++||+......
T Consensus 101 wd~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 101 WDVSNGQC----------------VATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp EETTTCCE----------------EEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred EECCCCcE----------------EEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 99998874 2233477889999999999999999999 99999999766432
Q ss_pred ceeeeccCCC--ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC
Q psy17188 338 IKAELTSSAP--ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 415 (504)
Q Consensus 338 ~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~ 415 (504)
.......+.. .+.+++|+|+++ ++++++.++.|++||++.... .......+...|.+++|+|++++|++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGK--YIIAGHKDGKISKYDVSNNYE----YVDSIDLHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGC--EEEEEETTSEEEEEETTTTTE----EEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred eeeeccCCcCccceeEEEEcCCCC--EEEEEcCCCEEEEEECCCCcE----eEEEEecCCCceeEEEECCCCCEEEEecC
Confidence 2223334444 899999999998 789999999999999976311 12223357888999999999999999999
Q ss_pred CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC--------------cEEEEEcCCcceEEEEeecC
Q psy17188 416 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------------NIAVWDLHNQTLVRQFQGHT 481 (504)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~h~ 481 (504)
|+.|++||+++++...... +...+..++|+|+++++++++.++ .+++||+.+++.+..+.+|.
T Consensus 239 d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp TSEEEEEETTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred CceEEEEECCCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence 9999999999877655544 566799999999999999999988 89999999999999999999
Q ss_pred CceEEEEEccCCCEEEEecCCCC
Q psy17188 482 DGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 482 ~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
..|++++|+|++++|++++.||+
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSE
T ss_pred CcEEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999999984
No 60
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=308.18 Aligned_cols=303 Identities=16% Similarity=0.233 Sum_probs=242.4
Q ss_pred ecCCCCceEEEEEccCCCEE-EEecC---CCcEEEEeCCCCCccceeeeecCcCceEEEEECCC---CCEEEEEeCCCcE
Q psy17188 155 CLQRDNYIRSVKLLPDGRTL-IVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNI 227 (504)
Q Consensus 155 ~~~~~~~v~~~~~s~~~~~l-~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i 227 (504)
..+|...|.+++|+|+++.+ ++++. |+.|++||+.+++... .....|...|.+++|+|+ +++|++++.|+.|
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 34699999999999998655 45655 8999999999766432 223478889999999998 6999999999999
Q ss_pred EEEECCCCe-EEEeecCCCCCeEEEEE------ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188 228 AVWDLHNQT-LVRQFQGHTDGASCIDI------SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300 (504)
Q Consensus 228 ~iwd~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (504)
++||+.+++ .+..+.+|...|.+++| +|++++|++++.|+.|++||+++++.....+. .....
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~----------~~~~~ 162 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME----------PVQGE 162 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC----------CCTTS
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc----------ccCCC
Confidence 999999988 88889999999999965 67899999999999999999998752111000 00111
Q ss_pred cCCceEEEE----EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC---CCCCceeeeccCCCeEE
Q psy17188 301 RDNYIRSVK----LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP---DSKSPFFSSHHYKSCVK 373 (504)
Q Consensus 301 ~~~~v~~~~----~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~i~ 373 (504)
....+.+++ |+|+++++++++.|+.|++||+++.+. .....+...+.+++|+| ++. .+++++.++.|+
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~--~l~~~~~dg~i~ 237 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDRKDISMN--KLVATSLEGKFH 237 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESCSSSSCC--EEEEEESTTEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCCCCCCCC--EEEEECCCCeEE
Confidence 234688888 788999999999999999999988753 33455677999999999 777 789999999999
Q ss_pred EEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCCCcc-----------------eeecc
Q psy17188 374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPR-----------------IKAEL 435 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~~~~-----------------~~~~~ 435 (504)
+||++...............|...|.+++|+|+++ +|++++.||.|++||++.+... ....+
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 99998765444443333346889999999999998 8999999999999999865432 34556
Q ss_pred cCCCCceeEEEECCCCCEEE-EeeCCCcEEEEEcCCcce
Q psy17188 436 TSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTL 473 (504)
Q Consensus 436 ~~~~~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~ 473 (504)
..|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 77889999999999999998 899999999999987654
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-39 Score=302.30 Aligned_cols=312 Identities=14% Similarity=0.213 Sum_probs=258.5
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 228 (504)
......+.+|...|++++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|+
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 44555666899999999999999999999999999999998765 3667788999999999999999999999999999
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEE-EeecCCCCCCCcccceecccC
Q psy17188 229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRD 302 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 302 (504)
+||+.+++.+..+. +...|.+++|+|++++|++++.+ +.|++||+..+.... +.... .............
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS---EEPIHKIITHEGL 175 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC---SSCSEEEECCTTC
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc---cceeeeccCCcCc
Confidence 99999999999988 89999999999999999999999 999999988654210 00000 0011112212222
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS 382 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 382 (504)
..+.+++|+|++++|++++.||.|++||+++.. .....+..+...+.+++|+|+++ ++++++.|+.|++||++....
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDLT--YFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCCC--EEEEecCCceEEEEECCCCce
Confidence 389999999999999999999999999998732 45566777888999999999988 789999999999999986532
Q ss_pred CCcccccccccCCCceEEEEEcCCCCEEEEeeCCC--------------cEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188 383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--------------NLSIWDLASPTPRIKAELTSSAPACYALAIS 448 (504)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 448 (504)
... ..+...+..++|+|+++++++++.++ .+++||..+++.. ..+..|...|++++|+
T Consensus 253 ~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 253 LKK------YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI--GRVQGHFGPLNTVAIS 324 (369)
T ss_dssp EEE------EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE--EEEECCSSCEEEEEEC
T ss_pred eee------ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch--hheecccCcEEEEEEC
Confidence 222 23677899999999999999999988 8999999877544 4456788899999999
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188 449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQF 477 (504)
Q Consensus 449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 477 (504)
|++++|++++.||.|++|+++++.....+
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred CCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 99999999999999999999877654443
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-39 Score=306.10 Aligned_cols=290 Identities=19% Similarity=0.303 Sum_probs=238.8
Q ss_pred ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe
Q psy17188 161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 240 (504)
Q Consensus 161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 240 (504)
.+.++.|++ ..+++++.|+.|++||+.+++..... ...|...|.+++|+|++++|++++.||.|++||+.+++.+..
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~-~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALA-ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEee-ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE
Confidence 456677765 55778889999999999987653222 223788999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
+.+|...|.+++|+ ++.|++++.||.|++||++..... ......|...|.+++|+|++++|+++
T Consensus 172 ~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 172 MAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ--------------IGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce--------------eeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 99999999999994 579999999999999999854321 33345678899999999999999999
Q ss_pred eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
+.|+.|++||+++. .....+..|...+.+++|+|++.. ++++++ .|+.|++||+....... ...+...+
T Consensus 236 ~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~-ll~~~~gs~d~~i~i~d~~~~~~~~------~~~~~~~v 306 (401)
T 4aez_A 236 GNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSN-LLATGGGTMDKQIHFWNAATGARVN------TVDAGSQV 306 (401)
T ss_dssp ETTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTT-EEEEECCTTTCEEEEEETTTCCEEE------EEECSSCE
T ss_pred eCCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCC-EEEEecCCCCCEEEEEECCCCCEEE------EEeCCCcE
Confidence 99999999999876 445566778889999999998876 555544 89999999998653222 22456789
Q ss_pred EEEEEcCCCCEEEE--eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188 399 RSVKLLPDGRTLIV--GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 476 (504)
Q Consensus 399 ~~~~~s~~g~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 476 (504)
.+++|+|++++|++ |+.||.|++||+.+++......+..|...|.+++|+|++++|++++.||.|++|++.+++.+..
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 99999999999999 5589999999999876666667788999999999999999999999999999999999988765
Q ss_pred Ee
Q psy17188 477 FQ 478 (504)
Q Consensus 477 ~~ 478 (504)
..
T Consensus 387 ~~ 388 (401)
T 4aez_A 387 PI 388 (401)
T ss_dssp --
T ss_pred cc
Confidence 54
No 63
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-41 Score=316.20 Aligned_cols=322 Identities=11% Similarity=0.076 Sum_probs=252.4
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
.-...|.+++|+|||+++|+++ |++|+ |.+.+ ..+ .+|...|.+++|+|+| .++.+.+|+.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l-----~gh~~~v~~V~FsPdg-------~~~~~~~~~~~ 75 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDI-----NCNSKNLFHVKEFPLE-------FENKLDFELAQ 75 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCC-----SSBGGGTEEEEEECCC-------CCCTTTTSCCC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---cee-----cCCCccEEEEEECCCC-------CcceEEEEeCC
Confidence 3458899999999999999999 99999 64443 222 2799999999999999 45665555543
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCC-----CeEEEEEccCCCEEEEEc
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISADGTKLWTGG 264 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~ 264 (504)
......+ .|...|.+++|+|+|++|++++.||.|++||.+. ++..+. |.. .+.+++|+|||++|++|+
T Consensus 76 ---~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 76 ---QNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp ---SSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred ---CceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 2222322 3478899999999999999999999999999544 667777 665 499999999999999999
Q ss_pred CCCeEEEEECCCCce------EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc-
Q psy17188 265 LDNTVRSWDLREGCV------KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR- 337 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~- 337 (504)
.||+|++||+.++.+ .+..+ .....+|...|.+++|+|+| +++++.|+.+++||+......
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti----------~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSI----------RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEE----------ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred CCCEEEEEECCCCccccccceeeeee----------ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence 999999999998752 10000 01124467899999999999 888889999999999886532
Q ss_pred ceeee-ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE--cCCCCEEEEee
Q psy17188 338 IKAEL-TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL--LPDGRTLIVGG 414 (504)
Q Consensus 338 ~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~~~~ 414 (504)
....+ ..|...|.+++|+ ++ .+++++ ++.|++||+...... .. ..+|...+..++| +||+..|++++
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~--~LASa~-~~tIkLWd~~~~~~~----~~-~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DY--KVVLTC-PGYVHKIDLKNYSIS----SL-KTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TT--EEEEEC-SSEEEEEETTTTEEE----EE-ECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred ceeeecccccCcEEEEEEE--CC--EEEEEe-CCeEEEEECCCCeEE----EE-EcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 22334 3677899999999 34 677776 699999998764211 11 2268889999999 99999999999
Q ss_pred CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188 415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT 494 (504)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~ 494 (504)
++|+ ++|..+ .++++||+..+++. |+++++|+...+. +..+.+ ...|.+++|||||+
T Consensus 287 edG~-klw~~d------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~ 343 (588)
T 2j04_A 287 KTSY-KVLLED------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGY 343 (588)
T ss_dssp SCEE-EEEESS------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSS
T ss_pred CCCC-EEEeec------------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCC
Confidence 9999 999876 14799999988875 9999999975554 445554 66799999999999
Q ss_pred EEEEecC
Q psy17188 495 KLWTGGL 501 (504)
Q Consensus 495 ~l~s~s~ 501 (504)
.+|+++.
T Consensus 344 ~lA~~~~ 350 (588)
T 2j04_A 344 SIAIVYD 350 (588)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999874
No 64
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-38 Score=302.61 Aligned_cols=308 Identities=17% Similarity=0.285 Sum_probs=245.7
Q ss_pred CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188 158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 237 (504)
Q Consensus 158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 237 (504)
.+-+++.|+||++ +.||+|. |++|+|||..+++......+.+|...|++++|+|++++|++|+.||.|++||+++++.
T Consensus 104 ~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 104 NDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp CCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred ccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence 3456788999975 5777775 8999999999988666666778888999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188 238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL 317 (504)
Q Consensus 238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 317 (504)
+..+.+|...+.++.++ +..|++++.|+.+++||....... ......|...+..+.++|+++++
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~--------------~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH--------------VATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee--------------eEEecccccceeeeeecCCCCee
Confidence 99999999999998875 679999999999999998876532 23345678889999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCCCceee-eccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188 318 IVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSKSPFFS-SHHYKSCVKVWDISQPGSKTPVSQLDCLQR 394 (504)
Q Consensus 318 ~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 394 (504)
++++.|+.+++|+...++.. .......+...|..++|+|++...+.. +++.|+.|++||+.++... .....
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~------~~~~~ 319 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL------SAVDA 319 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE------EEEEC
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc------eeecc
Confidence 99999999999999876532 345567788899999999988874333 4678999999999875322 22234
Q ss_pred CCceEEEEEcCCCCEEEEee--CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 395 DNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 395 ~~~i~~~~~s~~g~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
...+.++.|+|+++.+++++ .|+.|++||+.+++. ...+.+|...|++++|+||+++|++|+.|++|+|||+.+..
T Consensus 320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~--v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 56789999999999988765 789999999998764 44567899999999999999999999999999999998877
Q ss_pred eEEEEeecCCceEEEEEcc
Q psy17188 473 LVRQFQGHTDGASCIDISA 491 (504)
Q Consensus 473 ~~~~~~~h~~~v~~~~~s~ 491 (504)
.....+.+...+....|..
T Consensus 398 ~~~~~~~~~~~~~~~s~~~ 416 (420)
T 4gga_A 398 PARRREREKASAAKSSLIH 416 (420)
T ss_dssp CC-----------------
T ss_pred ccchhhhccCCccccccCC
Confidence 7766666665554444443
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-39 Score=305.18 Aligned_cols=298 Identities=14% Similarity=0.131 Sum_probs=246.6
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 236 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 236 (504)
.|...|.+++|+|++++|++++.|+.|++||+.+++......+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 47889999999999999999999999999999876544577788999999999999999999999999999999999887
Q ss_pred EEEe--ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188 237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314 (504)
Q Consensus 237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 314 (504)
.... +..|...|.+++|+|++++|++++.|+.|++||++.+..... .......|...|.+++|+|++
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV-----------CKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE-----------EEEECTTCCSCEEEEEECTTS
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee-----------eeeeecccCCCeeEEEEcCCC
Confidence 5444 466999999999999999999999999999999987752100 012224567889999999999
Q ss_pred CEEEEEeCCCcEEEEeCCC----------------CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188 315 RTLIVGGEASNLSIWDLAS----------------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378 (504)
Q Consensus 315 ~~l~~~~~dg~i~v~d~~~----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 378 (504)
++|++++.|+.|++||++. ........+..|...+.+++|+|+++ ++++++.|+.|++||++
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS--RVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS--EEEEEETTTEEEEEEGG
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC--EEEEEeCCCEEEEEECC
Confidence 9999999999999999752 12345556667888999999999998 89999999999999998
Q ss_pred CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC--CCcce-------------------------
Q psy17188 379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS--PTPRI------------------------- 431 (504)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~--~~~~~------------------------- 431 (504)
...... ....+...|.+++|+|++++|+++ .|+.|++|++.+ ++...
T Consensus 233 ~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (372)
T 1k8k_C 233 KKMAVA-----TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD 306 (372)
T ss_dssp GTTEEE-----EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred CCceeE-----EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcc
Confidence 653222 223567789999999999988887 899999999987 31000
Q ss_pred -----e------ecc-cCCCCceeEEEEC-CCC---CEEEEeeCCCcEEEEEcCCcce
Q psy17188 432 -----K------AEL-TSSAPACYALAIS-PDS---KVCFSCCSDGNIAVWDLHNQTL 473 (504)
Q Consensus 432 -----~------~~~-~~~~~~v~~l~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~ 473 (504)
. ..+ .+|...|++++|. +++ ++|++++.||.|++||+.+++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 307 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp CCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0 222 4788999999966 676 9999999999999999987654
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.4e-39 Score=309.30 Aligned_cols=319 Identities=19% Similarity=0.303 Sum_probs=258.8
Q ss_pred ceeee-cCCCc-EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188 106 QINTL-SHGEV-VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 182 (504)
Q Consensus 106 ~~~~~-~h~~~-V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 182 (504)
....+ +|.+. ++++.+ ++++|++++ ||+|++||+.+++ .+. ...+|.+.|.+++|+|++ +|++|+.||+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~---~~~--~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---FLL--QLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE---EEE--EECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc---EEE--EEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 33444 88777 577776 466888887 9999999998753 222 233799999999999988 9999999999
Q ss_pred EEEEeCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECCCCe-----------------------E
Q psy17188 183 LSIWDLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLHNQT-----------------------L 237 (504)
Q Consensus 183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~~~~-----------------------~ 237 (504)
|++||+.+++ ....+.+|...|.+++|+ +++++|++++.|+.|++||+.+++ .
T Consensus 185 i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 185 VRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp EEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred EEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 9999998765 466778899999999998 577899999999999999998765 2
Q ss_pred EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188 238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL 317 (504)
Q Consensus 238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 317 (504)
+..+.+|...|.++ +++++++++++.|+.|++||+++++. ......|...|.+++|+|+++++
T Consensus 263 ~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~l 325 (464)
T 3v7d_B 263 VGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC---------------LYILSGHTDRIYSTIYDHERKRC 325 (464)
T ss_dssp EEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEecCCCCCEEEEEEcCCCCEE
Confidence 55678899998887 56788999999999999999998874 23345678889999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188 318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397 (504)
Q Consensus 318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (504)
++++.|+.|++||++++ .....+..|...+.++++++ + ++++++.|+.|++||+...... ....+...
T Consensus 326 ~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~--~--~l~s~s~dg~v~vwd~~~~~~~------~~~~~~~~ 393 (464)
T 3v7d_B 326 ISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLSD--K--FLVSAAADGSIRGWDANDYSRK------FSYHHTNL 393 (464)
T ss_dssp EEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECS--S--EEEEEETTSEEEEEETTTCCEE------EEEECTTC
T ss_pred EEEeCCCcEEEEECCCC--cEEEEEeCCCCcEEEEEEcC--C--EEEEEeCCCcEEEEECCCCcee------eeecCCCC
Confidence 99999999999999887 45667778999999999984 2 8999999999999999864321 11235666
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw 466 (504)
+..++|++++++|++++ ||.|++||+++++.+.. ....+...|.+++|+ +..++++++.||.+.+|
T Consensus 394 ~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~-~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA-NILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp CCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES-CTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred ccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh-hhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 77899999999999998 89999999998875543 245568889999997 34555566667765554
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-39 Score=303.77 Aligned_cols=296 Identities=15% Similarity=0.207 Sum_probs=238.6
Q ss_pred CCCCceEEEEEccC----CCEEEEecCCCcEEEEeCCCCCccceeeee-----cCcCceEEEEECCC----CCEEEEEeC
Q psy17188 157 QRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDLASPTPRIKAELT-----SSAPACYALAISPD----SKVCFSCCS 223 (504)
Q Consensus 157 ~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~----~~~l~~~~~ 223 (504)
+|...|++++|+|+ ...+++++.++.|++||+.+++.. ..+. .|...|.+++|+|+ +++|++++.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI--RLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE--EeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 79999999999984 456666666779999999865532 2222 25678999999998 679999999
Q ss_pred CCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302 (504)
Q Consensus 224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (504)
||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.... ......+.
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~~~~~~~ 161 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI------------FGGVEGHR 161 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE------------ECSTTSCS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE------------eccccccc
Confidence 99999999999999999999999999999999 899999999999999999998864210 00014678
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce--------------------------eeeccCCCceeeEEECC
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK--------------------------AELTSSAPACYALAISP 356 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--------------------------~~~~~~~~~i~~~~~~~ 356 (504)
..|.+++|+|++++|++++.|+.|++||+++.+.... .....|...+.+++|+
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 8999999999999999999999999999987532211 1122378899999998
Q ss_pred CCCCceeeeccCCCeEEEEecCCCCCCCc---------ccccccccCCCceEEEEEcCC--CCEEEEeeCCCcEEEeeCC
Q psy17188 357 DSKSPFFSSHHYKSCVKVWDISQPGSKTP---------VSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~---------~~~~~~~~~~~~i~~~~~s~~--g~~l~~~~~dg~i~iwd~~ 425 (504)
++ ++++++.|+.|++||+........ ........|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 241 -~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 241 -GD--LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp -TT--EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred -CC--EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence 33 899999999999999987543111 112223346778999999999 9999999999999999999
Q ss_pred CCCcce--eecccCC--CCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 426 SPTPRI--KAELTSS--APACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 426 ~~~~~~--~~~~~~~--~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+++... ...+..| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 318 VEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 876442 2234444 78999999999999999999999999999853
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-38 Score=307.56 Aligned_cols=325 Identities=15% Similarity=0.268 Sum_probs=259.2
Q ss_pred cCCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188 156 LQRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 234 (504)
Q Consensus 156 ~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 234 (504)
.+|...+ .++.+ ++++|++|+.||+|++||+.+++ ....+.+|...|.+++|++++ +|++++.||+|++||+++
T Consensus 118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc--EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 3777764 66665 57899999999999999998765 466778999999999999988 999999999999999999
Q ss_pred CeEEEeecCCCCCeEEEEEc--cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC--------CCCCcccceecccCCc
Q psy17188 235 QTLVRQFQGHTDGASCIDIS--ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG--------SKTPVSQLDCLQRDNY 304 (504)
Q Consensus 235 ~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 304 (504)
++.+..+.+|...|.+++|+ +++++|++++.|++|++||++++........... ...+........|...
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 99999999999999999998 4778999999999999999987653211000000 0000012233456666
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 384 (504)
+.++ +++++++++++.|+.|++||+++. .....+..|...+.+++|+|+++ .+++++.|+.|++||++++...
T Consensus 273 v~~~--~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~--~l~sg~~dg~i~vwd~~~~~~~- 345 (464)
T 3v7d_B 273 VRTV--SGHGNIVVSGSYDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERK--RCISASMDTTIRIWDLENGELM- 345 (464)
T ss_dssp EEEE--EEETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTTEEE-
T ss_pred EEEE--cCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCcEE-
Confidence 6666 677899999999999999999876 45566778889999999999998 8999999999999999865322
Q ss_pred cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 464 (504)
Q Consensus 385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~ 464 (504)
.....|...|.+++|+ +++|++++.||.|++||+.+........ +...+..++|++++++|++++ ||.|+
T Consensus 346 ----~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~ 415 (464)
T 3v7d_B 346 ----YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFN 415 (464)
T ss_dssp ----EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEE
T ss_pred ----EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEE
Confidence 2234678899999997 5799999999999999999876443332 445577789999999999998 89999
Q ss_pred EEEcCCcceEEE-EeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 465 VWDLHNQTLVRQ-FQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 465 iwd~~~~~~~~~-~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
+||+.+++++.. +..|...|++++|+ +...+++++.||
T Consensus 416 iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g 454 (464)
T 3v7d_B 416 IYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDG 454 (464)
T ss_dssp EEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETT
T ss_pred EEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCC
Confidence 999999999876 66788999999997 344555555554
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-40 Score=312.95 Aligned_cols=341 Identities=13% Similarity=0.089 Sum_probs=231.0
Q ss_pred CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188 112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 190 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 190 (504)
|.+.|++++|+|++++|++++ |+.|+|||+.++. ........+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG---WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE---EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc---eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 567999999999999999997 9999999998641 012222337999999999999999999999999999999987
Q ss_pred CC-ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEeecC-CCCCeEEEEEccCCCEEEEEcC
Q psy17188 191 PT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQG-HTDGASCIDISADGTKLWTGGL 265 (504)
Q Consensus 191 ~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~ 265 (504)
++ ......+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 66 44466677899999999999999999999999999999999887 4677777 9999999999999999999999
Q ss_pred CCeEEEEECCCCceEEEeecCCC-CC-CCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc--eee
Q psy17188 266 DNTVRSWDLREGCVKVWDISQPG-SK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--KAE 341 (504)
Q Consensus 266 dg~i~~wd~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~ 341 (504)
|+.|++||++.+....-...... .. ..........|...|.+++|+|++++|++++.|+.|++||+++.+... ...
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 99999999975432110000000 00 000011112788889999999999999999999999999999875422 566
Q ss_pred eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC-------------CCceEEEEEcCCCC
Q psy17188 342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-------------DNYIRSVKLLPDGR 408 (504)
Q Consensus 342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~g~ 408 (504)
+..|...+.+++|+|+++ ++++++.++.+ +|+........ ...+..... ......+.|++...
T Consensus 247 ~~~~~~~v~~~~~s~~~~--~l~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (377)
T 3dwl_C 247 VKLSQLPLRSLLWANESA--IVAAGYNYSPI-LLQGNESGWAH-TRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRS 322 (377)
T ss_dssp EECSSSCEEEEEEEETTE--EEEEESSSSEE-EECCCC---CC-SBCCCSCCCCCCBSSSSSBCCCCCC-----------
T ss_pred ecCCCCceEEEEEcCCCC--EEEEEcCCcEE-EEEeCCCceEE-Eeeecccccccccccccccccccccccccccccccc
Confidence 778888999999999998 77887766665 77665322110 001100000 01133444443332
Q ss_pred EEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC-C---EEEEeeCCCcEEEEEc
Q psy17188 409 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-K---VCFSCCSDGNIAVWDL 468 (504)
Q Consensus 409 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~-~---~l~s~~~dg~i~iwd~ 468 (504)
.+......|... ........|...|+++++.++. . .|++++.||.|+|||+
T Consensus 323 ~~~~~~~~g~~~---------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 323 TFRNMDLKGSSQ---------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccchhhccccc---------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 222222222111 1122345688899999976543 3 6999999999999985
No 70
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-39 Score=306.92 Aligned_cols=303 Identities=13% Similarity=0.204 Sum_probs=244.7
Q ss_pred ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC----ccceeeeecCcCceEEEEECCC----C---CEEEEEeC
Q psy17188 155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT----PRIKAELTSSAPACYALAISPD----S---KVCFSCCS 223 (504)
Q Consensus 155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~ 223 (504)
..+|.+.|++++|+| ++|++++.||.|++|++.+.+ ......+..|...|.+++|+|+ + ++|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 347999999999998 899999999999999998766 3346677899999999999999 9 99999999
Q ss_pred CCcEEEEECCCCeE-----EEeecCC-----CCCeEEEEEc----cCCCE-EEEEcCCCeEEEEECCC------CceEEE
Q psy17188 224 DGNIAVWDLHNQTL-----VRQFQGH-----TDGASCIDIS----ADGTK-LWTGGLDNTVRSWDLRE------GCVKVW 282 (504)
Q Consensus 224 dg~i~iwd~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~~wd~~~------~~~~~~ 282 (504)
|+.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++||+++ ++...+
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999998876 8888888 5999999999 99999 99999999999999987 432100
Q ss_pred eecCCCCCCCccccee-----cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc---C---CCceee
Q psy17188 283 DISQPGSKTPVSQLDC-----LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS---S---APACYA 351 (504)
Q Consensus 283 ~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---~---~~~i~~ 351 (504)
. +...+.. ..+...+.+++|+|++ ++++++.|+.|++||+++. .....+.. | ...+.+
T Consensus 170 ~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 170 S--------PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL--RPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp C--------CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--EEEEEEECCC---CCCCCEEE
T ss_pred c--------CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--ceeEEEeccccccccCCccce
Confidence 0 0001111 3467889999999999 9999999999999999876 44455555 7 889999
Q ss_pred EEECCCCCCceeeeccCC---CeEEEEecCCCCCCCccccc--------ccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188 352 LAISPDSKSPFFSSHHYK---SCVKVWDISQPGSKTPVSQL--------DCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 420 (504)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~---~~i~i~d~~~~~~~~~~~~~--------~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~ 420 (504)
++|+|+++ ++++++.+ +.|++||++.......+... ....|...|.+++|+|++++|++++.||.|+
T Consensus 239 i~~~~~~~--~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 239 VKFSPQGS--LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EEECSSTT--EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEECCCCC--EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999988 78899999 99999999865322221110 0001788999999999999999999999999
Q ss_pred EeeCCCCCcceeeccc----CC---------------CCceeEEEECCCC----------CEEEEeeCCCcEEEEEcCCc
Q psy17188 421 IWDLASPTPRIKAELT----SS---------------APACYALAISPDS----------KVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 421 iwd~~~~~~~~~~~~~----~~---------------~~~v~~l~~s~~~----------~~l~s~~~dg~i~iwd~~~~ 471 (504)
+||+++++........ .| ...|++++|+|++ ++|++++.||.|++|++++|
T Consensus 317 iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 317 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999987655444311 45 7889999999998 79999999999999999876
Q ss_pred c
Q psy17188 472 T 472 (504)
Q Consensus 472 ~ 472 (504)
+
T Consensus 397 ~ 397 (397)
T 1sq9_A 397 K 397 (397)
T ss_dssp -
T ss_pred C
Confidence 4
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-40 Score=320.45 Aligned_cols=311 Identities=11% Similarity=0.048 Sum_probs=220.2
Q ss_pred ccCCCEEEEecCCCcEEEEeCCCCCccc--eeeeecCcCceEEEEECCC------CCEEEEEeCCCcEEEEECCCCeE--
Q psy17188 168 LPDGRTLIVGGEASNLSIWDLASPTPRI--KAELTSSAPACYALAISPD------SKVCFSCCSDGNIAVWDLHNQTL-- 237 (504)
Q Consensus 168 s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~iwd~~~~~~-- 237 (504)
+|+++.|++++.|++|+||++.+++... ...+..|...|.+++|+|+ +.+|++++.||+|++||+.+++.
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 3444455667788999999998765322 2345677888999999996 57999999999999999987632
Q ss_pred ---------EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188 238 ---------VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 308 (504)
Q Consensus 238 ---------~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 308 (504)
...+.+|...|++++|++++ .|++|+.||+|++||++++... ......|...|.++
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~--------------~~~~~~H~~~V~sv 314 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP--------------SFYDQVHDSYILSV 314 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC--------------SEEEECSSSCEEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc--------------eEEeecccccEEEE
Confidence 23677899999999999864 8999999999999999876310 22345688899999
Q ss_pred --EEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188 309 --KLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP 385 (504)
Q Consensus 309 --~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 385 (504)
+|++++ ++|++++.|++|++||+++.+.............+.+++|+|+++ .+++++.|+.|++||++......
T Consensus 315 ~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~--~l~s~~~d~tv~lwd~~~~~~~~- 391 (524)
T 2j04_B 315 STAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY--SYIYSDGASSLRAVPSRAAFAVH- 391 (524)
T ss_dssp EEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT--EEEEECSSSEEEEEETTCTTCCE-
T ss_pred EEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC--eEEEeCCCCcEEEEECcccccce-
Confidence 578887 899999999999999998764332222112223578999999988 68899999999999998754322
Q ss_pred ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-c--cCCCCceeEEEECCCCCEEEEeeCCCc
Q psy17188 386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-L--TSSAPACYALAISPDSKVCFSCCSDGN 462 (504)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~--~~~~~~v~~l~~s~~~~~l~s~~~dg~ 462 (504)
....|...|.+++|+|+|++|++|+.|++|++||+.... ..... . ..+...+..++|+|+++.+.. ..+
T Consensus 392 ----~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~-~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~~-- 463 (524)
T 2j04_B 392 ----PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRL-LHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DSS-- 463 (524)
T ss_dssp ----EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST-TTCC------CCCCEEEECBCCSSSCEEEE-CCC--
T ss_pred ----eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh-ccccccCccceeeeEEEEeccCCCCCeEEc-cCC--
Confidence 223688999999999999999999999999999986531 11100 0 012224678999999986532 222
Q ss_pred EEEEEcC-CcceEEEEeecCCceEEEEEccCCC---EEEEecCCCC
Q psy17188 463 IAVWDLH-NQTLVRQFQGHTDGASCIDISADGT---KLWTGGLDNT 504 (504)
Q Consensus 463 i~iwd~~-~~~~~~~~~~h~~~v~~~~~s~d~~---~l~s~s~Dgt 504 (504)
+.+|+.. ++.++..+.+|...|++++|+|+++ +|++|+.||+
T Consensus 464 ~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 464 YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCce
Confidence 3444443 5777888999999999999999964 9999999985
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=301.71 Aligned_cols=296 Identities=15% Similarity=0.225 Sum_probs=240.7
Q ss_pred cCCCcEEEEEEcCCCc-EEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC---CCEEEEecCCCc
Q psy17188 111 SHGEVVCAVTISNPTK-YVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGEASN 182 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~-~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~ 182 (504)
+|.+.|.+++|+|++. ++++++ |+.|+|||+.+++. ......+|...|.+++|+|+ +++|++++.|+.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL----KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE----EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc----cceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 7999999999999885 555553 79999999987532 22223368899999999998 699999999999
Q ss_pred EEEEeCCCCCccceeeeecCcCceEEEE------ECCCCCEEEEEeCCCcEEEEECCCCe-EEEeecCCCC----CeEEE
Q psy17188 183 LSIWDLASPTPRIKAELTSSAPACYALA------ISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTD----GASCI 251 (504)
Q Consensus 183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~h~~----~v~~~ 251 (504)
|++||+.+++. ....+.+|...|.++. |+|++++|++++.|+.|++||+++++ .+..+..|.+ .+.++
T Consensus 92 i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 92 LHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred EEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999987652 3566788999999995 57899999999999999999999886 6777766555 78999
Q ss_pred E----EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC---CCCEEEEEeCCC
Q psy17188 252 D----ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEAS 324 (504)
Q Consensus 252 ~----~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg 324 (504)
+ |+|++++|++++.|+.|++||+++++. .....+...+.+++|+| ++++|++++.||
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL----------------RWETNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEE----------------EEEEECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCce----------------eeecCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 8 678999999999999999999999873 23355678899999999 999999999999
Q ss_pred cEEEEeCCCCCcccee---eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc--------------cc
Q psy17188 325 NLSIWDLASPTPRIKA---ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP--------------VS 387 (504)
Q Consensus 325 ~i~v~d~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~--------------~~ 387 (504)
.|++||+++.+..... ....|...+.+++|+|+++. ++++++.|+.|++||++....... ..
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRE-LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCc-EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 9999999876443332 23478889999999999874 688999999999999986543311 11
Q ss_pred ccccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCCCCC
Q psy17188 388 QLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPT 428 (504)
Q Consensus 388 ~~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~~~~ 428 (504)
......|...|.+++|+|++++|+ +++.|+.|++||+.+.+
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 223445788999999999999998 79999999999998654
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-38 Score=322.54 Aligned_cols=283 Identities=20% Similarity=0.404 Sum_probs=234.1
Q ss_pred ecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCc---cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188 155 CLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230 (504)
Q Consensus 155 ~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 230 (504)
+.+|.+.|++++|+|+ +++|++|+.|++|++|++..... .....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4489999999999986 47999999999999999976432 2345678999999999999999999999999999999
Q ss_pred ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||......... ......|...|.+++|
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~------------~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI------------SEGGEGHRDWVSCVRF 525 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE------------CSSTTSCSSCEEEEEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceee------------ccCCCCCCCcEEEEEE
Confidence 9999999999999999999999999999999999999999999876542211 1112357778999999
Q ss_pred cCCC--CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188 311 LPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ 388 (504)
Q Consensus 311 ~~~~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 388 (504)
+|++ ..+++++.|+.|++||+++.+. ...
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~----------------------------------------------- 556 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKL--RST----------------------------------------------- 556 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCE--EEE-----------------------------------------------
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcE--EEE-----------------------------------------------
Confidence 9986 5799999999999999876421 000
Q ss_pred cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
...|...|.+++|+|++++|++++.||.|++||+.+++.+.. +. +...+.+++|+|++.+|++++ ++.|+|||+
T Consensus 557 --~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~ 630 (694)
T 3dm0_A 557 --LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS--LE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDL 630 (694)
T ss_dssp --ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC--CB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEET
T ss_pred --EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE--ec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEEC
Confidence 013566788999999999999999999999999998754433 22 345699999999999888776 456999999
Q ss_pred CCcceEEEEeecC-------------------CceEEEEEccCCCEEEEecCCCC
Q psy17188 469 HNQTLVRQFQGHT-------------------DGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 469 ~~~~~~~~~~~h~-------------------~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
.+++.+..+..+. ..+++++|+|||++|++|+.||+
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~ 685 (694)
T 3dm0_A 631 ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV 685 (694)
T ss_dssp TTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe
Confidence 9999887775322 13789999999999999999985
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.8e-39 Score=301.76 Aligned_cols=310 Identities=13% Similarity=0.128 Sum_probs=242.3
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
.|.+.|++++|+|++++|++++ |+.|++||+++++ ...+. ...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVH--ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-EEEEE--EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-EEeee--eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 4889999999999999999997 9999999997642 01222 233789999999999999999999999999999998
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGASCIDISADGTKLWTGGL 265 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 265 (504)
+++......+..|...|.+++|+|++++|++++.|+.|++||++.++ .......|...|.+++|+|++++|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 77655555567789999999999999999999999999999998875 23334678999999999999999999999
Q ss_pred CCeEEEEECCCCceEEEeecCC---CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188 266 DNTVRSWDLREGCVKVWDISQP---GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342 (504)
Q Consensus 266 dg~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 342 (504)
|+.|++||++............ .............+...+.+++|+|++++|++++.|+.|++||+++.+ ....+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~ 240 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--AVATL 240 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--EEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--eeEEE
Confidence 9999999975322100000000 000000122233677889999999999999999999999999998774 55566
Q ss_pred ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC--CC----------------------------CCCccc-----
Q psy17188 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ--PG----------------------------SKTPVS----- 387 (504)
Q Consensus 343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~--~~----------------------------~~~~~~----- 387 (504)
..+...+.+++|+|++. +++++ .|+.|++|+++. +. ......
T Consensus 241 ~~~~~~v~~~~~~~~~~--~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 241 ASETLPLLAVTFITESS--LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp ECSSCCEEEEEEEETTE--EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred ccCCCCeEEEEEecCCC--EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 77888999999999987 66666 899999999987 21 000000
Q ss_pred -ccccccCCCceEEEEEc-CCC---CEEEEeeCCCcEEEeeCCCCC
Q psy17188 388 -QLDCLQRDNYIRSVKLL-PDG---RTLIVGGEASNLSIWDLASPT 428 (504)
Q Consensus 388 -~~~~~~~~~~i~~~~~s-~~g---~~l~~~~~dg~i~iwd~~~~~ 428 (504)
......|...|++++|. ++| .+|++++.||.|++||+++++
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 11113688899999966 676 999999999999999987543
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-38 Score=288.81 Aligned_cols=293 Identities=17% Similarity=0.261 Sum_probs=237.7
Q ss_pred ccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188 104 ARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 181 (504)
Q Consensus 104 ~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 181 (504)
.+.+..+ +|.+.|++++| +++++|++++ ||.|++||+.++. ... ....|...|.+++|+|++++|++++.|+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW---LGT--VVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE---EEE--EEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE---EEE--EeecCCccEEEEEECCCCCEEEEecCCC
Confidence 3555666 89999999999 8898899888 9999999997642 222 2236889999999999999999999999
Q ss_pred cEEEEeCCCCC-ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCE
Q psy17188 182 NLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTK 259 (504)
Q Consensus 182 ~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~ 259 (504)
.|++|++.... ......+..|...|.+++| ++++|++++.|+.|++|| .++.+..+..|...+.+++|.| ++++
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence 99999987643 2345667889999999999 577999999999999999 7788888999999999999998 8999
Q ss_pred EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
+++++.|+.|++||..... ......+...+.+++|+|++. +++++.|+.|++||+++++..
T Consensus 158 l~~~~~d~~i~i~d~~~~~----------------~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~-- 218 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKVI----------------KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL-- 218 (313)
T ss_dssp EEEEETTSCEEEEETTEEE----------------EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE--
T ss_pred EEEEECCCCEEEEecCceE----------------EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh--
Confidence 9999999999999943221 111223678899999999998 899999999999998765211
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
..+ ..|...|.+++|+|++ .|++++.||.|
T Consensus 219 ~~~-------------------------------------------------~~~~~~i~~~~~~~~~-~l~~~~~dg~v 248 (313)
T 3odt_A 219 RTY-------------------------------------------------EGHESFVYCIKLLPNG-DIVSCGEDRTV 248 (313)
T ss_dssp EEE-------------------------------------------------ECCSSCEEEEEECTTS-CEEEEETTSEE
T ss_pred hhh-------------------------------------------------hcCCceEEEEEEecCC-CEEEEecCCEE
Confidence 111 1345668899999999 58899999999
Q ss_pred EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188 420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 478 (504)
++||+++++... .+..+...|++++|+|+++ +++++.||.|++||+++++.+....
T Consensus 249 ~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 249 RIWSKENGSLKQ--VITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEECTTTCCEEE--EEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred EEEECCCCceeE--EEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 999999876544 3456677899999999998 5678999999999999987765543
No 76
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.6e-39 Score=299.00 Aligned_cols=295 Identities=13% Similarity=0.134 Sum_probs=222.1
Q ss_pred CCCcEEEEEEcCCCcEEEEec-C-------CeEEEEeCCCCCCCCc-----eeeeeecCCCCceEEEEEccCCCEEEEe-
Q psy17188 112 HGEVVCAVTISNPTKYVYTGG-K-------GCVKVWDISQPGSKTP-----VSQLDCLQRDNYIRSVKLLPDGRTLIVG- 177 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~-d-------~~i~vw~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~- 177 (504)
-.-+|++++|+||+++|++|+ | +.|++|+++....... .....+.+|+..|.+++++ ++.+++|
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 346899999999999999986 2 3599999987543321 1223445778888888765 5566665
Q ss_pred ----------cCCCcEEEEeCCCCCcccee-------eeecCcCceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEE
Q psy17188 178 ----------GEASNLSIWDLASPTPRIKA-------ELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLV 238 (504)
Q Consensus 178 ----------~~dg~i~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~ 238 (504)
+.|+.+++|++...+..... ....+...+.+++|+|||++|++++ .|++|+|||+++++++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 45788999998765432211 1123445688999999999877554 6899999999999999
Q ss_pred EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188 239 RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 318 (504)
Q Consensus 239 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 318 (504)
..+. |...|.+++|+|||++|++++.| .+++|+..+++... ......+...+.+++|+|++++++
T Consensus 171 ~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~v~~v~fspdg~~l~ 235 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIA-------------RKTDFDKNWSLSKINFIADDTVLI 235 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEE-------------EECCCCTTEEEEEEEEEETTEEEE
T ss_pred EEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCccee-------------eeecCCCCCCEEEEEEcCCCCEEE
Confidence 9887 88899999999999999999855 56667666665321 223345677899999999999999
Q ss_pred EEeCCC----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188 319 VGGEAS----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR 394 (504)
Q Consensus 319 ~~~~dg----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 394 (504)
+++.++ .+++|++........ + ......|
T Consensus 236 ~~s~d~~~~~~i~~~~~~~~~~~~~---------------------------------~--------------~~~~~~~ 268 (365)
T 4h5i_A 236 AASLKKGKGIVLTKISIKSGNTSVL---------------------------------R--------------SKQVTNR 268 (365)
T ss_dssp EEEESSSCCEEEEEEEEETTEEEEE---------------------------------E--------------EEEEESS
T ss_pred EEecCCcceeEEeecccccceecce---------------------------------e--------------eeeecCC
Confidence 998776 466676554311100 0 0111245
Q ss_pred CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188 395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
...|++++|+|||++||+|+.|+.|+|||+++++.+. ..+.+|...|++++|+||+++||+|+.|++|+|||+...
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~-~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK-IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE-EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE-EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 6678999999999999999999999999999775432 225679999999999999999999999999999999643
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=297.55 Aligned_cols=347 Identities=16% Similarity=0.234 Sum_probs=236.6
Q ss_pred ecCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeee--------ecCCCCceEEEEEcc-CCCEEEEec
Q psy17188 110 LSHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD--------CLQRDNYIRSVKLLP-DGRTLIVGG 178 (504)
Q Consensus 110 ~~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~-~~~~l~~~~ 178 (504)
.+|.+.|++++|+| ++++|++++ ||.|++||+.++.......... ...|...|.+++|+| ++++|++++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 37999999999999 999999998 9999999999865544433211 124899999999999 788999999
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC---CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 255 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 255 (504)
.|+.|++||+.+++.. .. ..+...+.++.|++. +.++++++.|+.|++||+++++.+..+..|...|.+++|+|
T Consensus 120 ~d~~i~iwd~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTA--DV-FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp TTSEEEEEETTTTEEE--EE-EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred CCCeEEEeeCCCCccc--ee-ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 9999999999876532 22 236677999999984 44999999999999999999999999999999999999999
Q ss_pred CCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCC-CCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17188 256 DGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGS-KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 333 (504)
Q Consensus 256 ~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 333 (504)
+++ +|++++.||.|++||++++............ ...........+...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 988 5899999999999999887533222221111 11111222346788899999999999999999999999999998
Q ss_pred CCccceeeecc--CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188 334 PTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411 (504)
Q Consensus 334 ~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 411 (504)
.+......... .........+...... .++.++.++.|++||+....... ....|...|.+++|+|++++|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGEQIT-----MLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCCEEE-----EECCCSSCEEEEEEETTTTEEE
T ss_pred CccceeccccccccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCccee-----eeccCCCeEEEEEEcCCCCEEE
Confidence 75433222111 1111112222222222 46666789999999998754322 2235788999999999999999
Q ss_pred EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCC
Q psy17188 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+++.||.|++||+++.+.......... ...+.+ +...+.+.+.++.+++|+...
T Consensus 351 s~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 351 SGSRDCNILAWVPSLYEPVPDDDETTT-----KSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp EEETTSCEEEEEECC---------------------------------------------
T ss_pred EECCCCeEEEEeCCCCCccCCCCceEe-----ccccccccceeecccCccCceeecCCcc
Confidence 999999999999998765443222111 113333 334455677889999998653
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.6e-38 Score=296.92 Aligned_cols=288 Identities=14% Similarity=0.206 Sum_probs=236.0
Q ss_pred ceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEeec--CCCCCeEEEEEcc-CCCEEEEEcCCCeEE
Q psy17188 195 IKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISA-DGTKLWTGGLDNTVR 270 (504)
Q Consensus 195 ~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~~l~s~~~dg~i~ 270 (504)
....+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 355678899999999999998 899999999999999999887776665 6999999999999 778999999999999
Q ss_pred EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY 350 (504)
Q Consensus 271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~ 350 (504)
+||+++.....+ .....+...+.+++|+|++++|++++.|+.|++||++. .....+..|...+.
T Consensus 145 iwd~~~~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 145 LRDFSGSVIQVF-------------AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLHKAKVT 208 (383)
T ss_dssp EEETTSCEEEEE-------------ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECSSSCEE
T ss_pred EEECCCCceEEE-------------eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccCCCcEE
Confidence 999997654321 11223457799999999999999999999999999942 45667778899999
Q ss_pred eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCc
Q psy17188 351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTP 429 (504)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~ 429 (504)
+++|+|+++. ++++++.|+.|++||++......... ....|...|.+++|+| ++++|++++.|+.|++||+++++.
T Consensus 209 ~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 209 HAEFNPRCDW-LMATSSVDATVKLWDLRNIKDKNSYI--AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEECSSCTT-EEEEEETTSEEEEEEGGGCCSTTCEE--EEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEECCCCCC-EEEEEeCCCEEEEEeCCCCCcccceE--EEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 9999999876 78899999999999998754322221 2225788999999999 999999999999999999998765
Q ss_pred ceeeccc-----CCC----------CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee--cCCceEEEEEccC
Q psy17188 430 RIKAELT-----SSA----------PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCIDISAD 492 (504)
Q Consensus 430 ~~~~~~~-----~~~----------~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~s~d 492 (504)
....... .+. ..+..++|+|++++ +++.|+.|++||+.+++++..+.+ |...+..++|+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~ 363 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT 363 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC
Confidence 4433211 112 23444666777766 778999999999999999999987 4577888899999
Q ss_pred CCEEEEecCCCC
Q psy17188 493 GTKLWTGGLDNT 504 (504)
Q Consensus 493 ~~~l~s~s~Dgt 504 (504)
+++|++++ ||+
T Consensus 364 g~~l~s~s-d~~ 374 (383)
T 3ei3_B 364 GDVLASGM-GFN 374 (383)
T ss_dssp SSEEEEEE-TTE
T ss_pred ccEEEEec-CCc
Confidence 99999997 763
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=301.27 Aligned_cols=322 Identities=14% Similarity=0.165 Sum_probs=248.1
Q ss_pred CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeee-----------e
Q psy17188 133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAEL-----------T 200 (504)
Q Consensus 133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~ 200 (504)
++.+++|+++.... ... ...|.+.|++++|+| ++++|++++.||.|++||+.+.+....... .
T Consensus 22 ~~~~~v~~~~~~~~---~~~--~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
T 4a11_B 22 ESTRRVLGLELNKD---RDV--ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPD 96 (408)
T ss_dssp HHHHHHHTEEECTT---EEE--CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTT
T ss_pred cCcceeeccccCcc---eee--eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccc
Confidence 45677888766432 222 226999999999999 999999999999999999998765433322 2
Q ss_pred cCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC---CCEEEEEcCCCeEEEEECCC
Q psy17188 201 SSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD---GTKLWTGGLDNTVRSWDLRE 276 (504)
Q Consensus 201 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~ 276 (504)
+|...|.+++|+| ++.+|++++.|+.|++||+.+++.+..+. +...+.++.+++. +.++++++.|+.|++||+++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 4899999999999 77899999999999999999999988887 8889999999984 45999999999999999998
Q ss_pred CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccce--------------ee
Q psy17188 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIK--------------AE 341 (504)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~--------------~~ 341 (504)
++. ......|...|.+++|+|+++ .+++++.||.|++||+++...... ..
T Consensus 176 ~~~---------------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 176 GSC---------------SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp SCC---------------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred cce---------------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 763 233446788999999999998 588999999999999987642211 11
Q ss_pred eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188 342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 421 (504)
Q Consensus 342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i 421 (504)
...|...+.+++|+|+++ ++++++.|+.|++||+....................+........+..+++++.++.|++
T Consensus 241 ~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGL--HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp SCSCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred cccccCceeEEEEcCCCC--EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence 256778999999999988 899999999999999987654333222111112222223333344556777788999999
Q ss_pred eeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188 422 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 479 (504)
Q Consensus 422 wd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 479 (504)
||+.+++.. ..+..|...|++++|+|++++|++++.||.|++||+.+++.+.....
T Consensus 319 ~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 319 YTVYSGEQI--TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp EETTTCCEE--EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred EECcCCcce--eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 999987644 45567888999999999999999999999999999999988765543
No 80
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-38 Score=301.28 Aligned_cols=295 Identities=17% Similarity=0.250 Sum_probs=238.0
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCce-eeeeecCCCCceEEEEEccC----C---CEEEEecCCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPD----G---RTLIVGGEAS 181 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~dg 181 (504)
+|.+.|++++|+| ++|++++ |+.|++|++.++...... .......|...|.+++|+|+ + ++|++++.|+
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg 91 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG 91 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC
Confidence 8999999999999 6777777 999999999886422211 12233478999999999999 9 9999999999
Q ss_pred cEEEEeCCCCCcc---ceeeeecC-----cCceEEEEEC----CCCCE-EEEEeCCCcEEEEECCC------CeEEE---
Q psy17188 182 NLSIWDLASPTPR---IKAELTSS-----APACYALAIS----PDSKV-CFSCCSDGNIAVWDLHN------QTLVR--- 239 (504)
Q Consensus 182 ~i~iw~~~~~~~~---~~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~iwd~~~------~~~~~--- 239 (504)
.|++|++.+++.. ....+..| ...|.+++|+ |++++ |++++.|+.|++||+.+ ++.+.
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 171 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 171 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccC
Confidence 9999999866531 14556667 5889999999 99999 99999999999999998 66555
Q ss_pred --ee-------cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc---c---CCc
Q psy17188 240 --QF-------QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ---R---DNY 304 (504)
Q Consensus 240 --~~-------~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~ 304 (504)
.+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.. ..... | ...
T Consensus 172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~---------------~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 172 TLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL---------------YNFESQHSMINNSNS 235 (397)
T ss_dssp EEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE---------------EEEECCC---CCCCC
T ss_pred cceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee---------------EEEeccccccccCCc
Confidence 66 4489999999999999 9999999999999999987642 22223 5 788
Q ss_pred eEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCccceeeecc-------------CCCceeeEEECCCCCCceeeeccC
Q psy17188 305 IRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTS-------------SAPACYALAISPDSKSPFFSSHHY 368 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~~~~ 368 (504)
+.+++|+|++++|++++.| +.|++||+++.+ ....+.. |...+.+++|+|+++ ++++++.
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~ 311 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE--TLCSAGW 311 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSS--EEEEEET
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCC--EEEEEeC
Confidence 9999999999999999999 999999998774 4445555 888999999999998 8999999
Q ss_pred CCeEEEEecCCCCCCCccccc-ccccC---------------CCceEEEEEcCCC----------CEEEEeeCCCcEEEe
Q psy17188 369 KSCVKVWDISQPGSKTPVSQL-DCLQR---------------DNYIRSVKLLPDG----------RTLIVGGEASNLSIW 422 (504)
Q Consensus 369 ~~~i~i~d~~~~~~~~~~~~~-~~~~~---------------~~~i~~~~~s~~g----------~~l~~~~~dg~i~iw 422 (504)
|+.|++||++.......+... ....| ...|.+++|+|++ ++|++++.||.|++|
T Consensus 312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 999999999875432222200 00033 7889999999998 799999999999999
Q ss_pred eCCCC
Q psy17188 423 DLASP 427 (504)
Q Consensus 423 d~~~~ 427 (504)
+++++
T Consensus 392 ~~~~g 396 (397)
T 1sq9_A 392 REAGG 396 (397)
T ss_dssp EEEC-
T ss_pred EcCCC
Confidence 98765
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.3e-38 Score=284.91 Aligned_cols=257 Identities=15% Similarity=0.273 Sum_probs=214.6
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECC
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLH 233 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~ 233 (504)
.+|...|++++|+|++++||+|+.|++|+|||+..........+.+|...|.+++|+++ +++|++++.|++|++||++
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 47999999999999999999999999999999986554557788999999999999864 8899999999999999999
Q ss_pred CCe--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 234 NQT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 234 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
+++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||++++... .......|...|.+++
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-------------~~~~~~~h~~~v~~~~ 152 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSAS 152 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-------------CCEEEECCSSCEEEEE
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-------------eeeeeecccCccceEe
Confidence 874 55677889999999999997 889999999999999999875310 0223456788899999
Q ss_pred EcCC-------------CCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCC-CceeeeccCCCeEE
Q psy17188 310 LLPD-------------GRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSK-SPFFSSHHYKSCVK 373 (504)
Q Consensus 310 ~~~~-------------~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~i~ 373 (504)
|+|+ +++|++++.|+.|++||+++.... ....+..|...|.+++|+|++. ..++++++.|+.|+
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 9997 579999999999999999875422 4456778999999999999961 13899999999999
Q ss_pred EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
+||++...............+...|.+++|+|++++|++++.|+.|++|+..
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9999764322111222223567889999999999999999999999999976
No 82
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.8e-38 Score=292.10 Aligned_cols=275 Identities=18% Similarity=0.239 Sum_probs=230.8
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-cceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEEC-C
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDL-H 233 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~-~ 233 (504)
+|.+.|.+++|+|++++|++++.|+.|++|++.+++. ........|...|.+++|+|+++ +|++++.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 6899999999999999999999999999999987651 12344568999999999999999 9999999999999999 7
Q ss_pred CCeEEEeecC--CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC---------CceEEEeecCCCCCCCcccceecccC
Q psy17188 234 NQTLVRQFQG--HTDGASCIDISADGTKLWTGGLDNTVRSWDLRE---------GCVKVWDISQPGSKTPVSQLDCLQRD 302 (504)
Q Consensus 234 ~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (504)
+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ++ ......+.
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~ 150 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL----------------NSNNTKVK 150 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES----------------CSSSSSSC
T ss_pred CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC----------------eeeEEeeC
Confidence 7755 67788 999999999999 99999999999999999876 33 22223377
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG 381 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~ 381 (504)
..+.+++|+|++ +++++.++.|++||+++ .........
T Consensus 151 ~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~--------------------------------------- 189 (342)
T 1yfq_A 151 NKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEE--------------------------------------- 189 (342)
T ss_dssp CCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEE---------------------------------------
T ss_pred CceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeee---------------------------------------
Confidence 889999999887 88999999999999886 421111000
Q ss_pred CCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCC------CcceeecccCC---------CCceeEE
Q psy17188 382 SKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASP------TPRIKAELTSS---------APACYAL 445 (504)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~---------~~~v~~l 445 (504)
..+...+.+++|+| +++++++++.||.|++|+++.. +.... +..| ...|+++
T Consensus 190 ----------~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~ 257 (342)
T 1yfq_A 190 ----------SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA--FRCHRLNLKDTNLAYPVNSI 257 (342)
T ss_dssp ----------CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE--EECCCCCTTCCSSCCCEEEE
T ss_pred ----------cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee--eecccccccccccceeEEEE
Confidence 12345577999999 9999999999999999998765 33333 3333 3489999
Q ss_pred EECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec-CCceEEEEEccCCCEEEEecCCCC
Q psy17188 446 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 446 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+|+|++++|++++.||.|++||+.+++++..+.+| ...|++++ |++++|++++.||+
T Consensus 258 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 99999999999999999999999999999999998 99999999 99999999999985
No 83
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-40 Score=307.53 Aligned_cols=317 Identities=15% Similarity=0.102 Sum_probs=248.2
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCce
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPV 150 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~ 150 (504)
...|.+++|+|||+.++.+..|..+.. +...+.+ -+|...|.+++|+|+| .++.+.+|+.+. ...+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~d---~~~~~~l--~gh~~~v~~V~FsPdg------~~~~~~~~~~~~---~~~~ 80 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIGQ---PKYAKDI--NCNSKNLFHVKEFPLE------FENKLDFELAQQ---NGLL 80 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEEE---ECCCSCC--SSBGGGTEEEEEECCC------CCCTTTTSCCCS---SCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceeec---cccccee--cCCCccEEEEEECCCC------CcceEEEEeCCC---ceEe
Confidence 357999999999999999999888772 3333333 2899999999999998 455555555332 2211
Q ss_pred eeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC-----ceEEEEECCCCCEEEEEeCCC
Q psy17188 151 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-----ACYALAISPDSKVCFSCCSDG 225 (504)
Q Consensus 151 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg 225 (504)
. ..|...|.+++|||+|++||+++.||.|++||.+. ....+. |.. .+.+++|||||++|++|+.||
T Consensus 81 ~----~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 81 N----SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp T----TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred e----cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 1 14578999999999999999999999999999543 334445 554 599999999999999999999
Q ss_pred cEEEEECCCCe-------EEEee----cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188 226 NIAVWDLHNQT-------LVRQF----QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS 294 (504)
Q Consensus 226 ~i~iwd~~~~~-------~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 294 (504)
+|++||+.++. .+.++ .+|...|.+++|+||| +++++.|+++++||+.+++... .
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~----------~-- 217 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP----------V-- 217 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC----------C--
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc----------c--
Confidence 99999999875 35666 6788999999999999 8888999999999998775210 0
Q ss_pred ccee-cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE--CCCCCCceeeeccCCCe
Q psy17188 295 QLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKSPFFSSHHYKSC 371 (504)
Q Consensus 295 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~ 371 (504)
.... ..|...|.+++|+ ++.|++++ ++.|++||+.+.+ ......+|...+..+++ +|++. .++++..+|+
T Consensus 218 ~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~--~~~~~~gh~~~V~~va~~~s~d~~--~La~a~edG~ 290 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS--ISSLKTGSLENFHIIPLNHEKEST--ILLMSNKTSY 290 (588)
T ss_dssp EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE--EEEEECSCCSCCCEEEETTCSSCE--EEEECSSCEE
T ss_pred eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe--EEEEEcCCCceEEEEEeeeCCCCC--EEEEEcCCCC
Confidence 0111 2566889999999 68888887 6999999998763 21222268899999999 99987 7999999999
Q ss_pred EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 451 (504)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~ 451 (504)
++|..+ .++++||+..+++. |+++++|+..... .. .+.+ ...|.+++|+|||
T Consensus 291 -klw~~d---------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~--~~~~-~~~I~~va~SPdG 342 (588)
T 2j04_A 291 -KVLLED---------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FN--NYET-TLVIHGISLSPDG 342 (588)
T ss_dssp -EEEESS---------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SS--SSCC-EEEEEEEEECTTS
T ss_pred -EEEeec---------------------cEEECCCceEEEEc--CCEEEEEECCCCc-ee--eecc-ceEEEEEEECCCC
Confidence 999875 25699999887775 9999999986543 11 3333 5669999999999
Q ss_pred CEEEEeeC
Q psy17188 452 KVCFSCCS 459 (504)
Q Consensus 452 ~~l~s~~~ 459 (504)
+.+|+++.
T Consensus 343 ~~lA~~~~ 350 (588)
T 2j04_A 343 YSIAIVYD 350 (588)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEe
Confidence 99998864
No 84
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.8e-38 Score=301.43 Aligned_cols=287 Identities=15% Similarity=0.230 Sum_probs=228.7
Q ss_pred eeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEE
Q psy17188 196 KAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRS 271 (504)
Q Consensus 196 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~ 271 (504)
......|...|++++|+| ++++|++|+.||.|+|||+.+++ ....+.+|.+.|++++|+| ++++|++++.||+|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 345567888999999999 56799999999999999998764 4455678999999999998 6889999999999999
Q ss_pred EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 351 (504)
Q Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~ 351 (504)
||++++....+ .........+.+++|+|++++|++|+.||.|++||++.. ....+..|...|.+
T Consensus 192 wd~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 192 QDFKGNILRVF-------------ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTH 255 (435)
T ss_dssp EETTSCEEEEE-------------ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEE
T ss_pred eeccCCceeEE-------------eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEe
Confidence 99988765432 111233455788999999999999999999999998753 34566788899999
Q ss_pred EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188 352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~ 431 (504)
++|+|++.. ++++++.|+.|++||++.......+ .....|...|.+++|+|+|++|++++.||.|++||+.+++...
T Consensus 256 v~~~p~~~~-~~~s~s~d~~v~iwd~~~~~~~~~~--~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 256 VALNPCCDW-FLATASVDQTVKIWDLRQVRGKASF--LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EEECTTCSS-EEEEEETTSBCCEEETTTCCSSSCC--SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred eeecCCCce-EEEEecCcceeeEEecccccccceE--EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 999999876 7889999999999999876543332 2234678899999999999999999999999999999876544
Q ss_pred eecccCC----CCceeEEEECCCCCEEEEee------------CCCcEEEEEcCCcceEEEEe-ecCCceEEE-EEccCC
Q psy17188 432 KAELTSS----APACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQ-GHTDGASCI-DISADG 493 (504)
Q Consensus 432 ~~~~~~~----~~~v~~l~~s~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~-~~s~d~ 493 (504)
......+ ...+....|+|++.+++++. .++.|++||..+++++..+. +|...|.++ +|+|||
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg 412 (435)
T 4e54_B 333 GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG 412 (435)
T ss_dssp EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS
T ss_pred EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC
Confidence 3322211 11233456777777766654 34579999999999988875 577888887 699999
Q ss_pred CEEEEecC
Q psy17188 494 TKLWTGGL 501 (504)
Q Consensus 494 ~~l~s~s~ 501 (504)
++|++|+.
T Consensus 413 ~~lasg~d 420 (435)
T 4e54_B 413 DTLASAMG 420 (435)
T ss_dssp SCEEEECS
T ss_pred CEEEEEcC
Confidence 99999873
No 85
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=278.72 Aligned_cols=286 Identities=18% Similarity=0.310 Sum_probs=239.6
Q ss_pred ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe
Q psy17188 161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 240 (504)
Q Consensus 161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 240 (504)
+.++|+||+++ +||+| .|++|+|||+.+++......+.+|...|++++|+|++++|++|+.|++|++||+++++.+..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 46789999886 77776 58999999999887665666678888999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
+.+|...+.++.+ ++..+++++.++.+++|+....... ......|...+..+.+++++++|+++
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~s~ 168 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHH--------------VATLSGHSQEVCGLRWAPDGRHLASG 168 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCcee--------------EEEEcCccCceEEEEEcCCCCEEEEE
Confidence 9999998887665 4679999999999999998876532 33345678889999999999999999
Q ss_pred eCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCCCce-eeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188 321 GEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSKSPF-FSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (504)
+.|+.|++||+++++.. .......+...+..+.++|++...+ +++++.++.|++||.+.... .....+...
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~------~~~~~~~~~ 242 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------LSAVDAHSQ 242 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE------EEEEECSSC
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc------cccccceee
Confidence 99999999999876532 3445566777899999999887643 35678899999999876432 222346677
Q ss_pred eEEEEEcCCCCEEEEee--CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 398 IRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
+..+.|+|++..+++++ .|+.|++||+++++.+ ..+.+|...|++++|+||+++|++|+.||+|+|||+.+..
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~--~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV--AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999887654 7999999999987654 4567899999999999999999999999999999997653
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=290.53 Aligned_cols=280 Identities=18% Similarity=0.289 Sum_probs=224.7
Q ss_pred cCCCCceEEEEEccC---CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188 156 LQRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 232 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 232 (504)
.+|.+.|++++|+|+ +++|++++.||.|++||+.+........+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 379999999999998 69999999999999999987444445778899999999999999999999999999999999
Q ss_pred CCCeEEEeecCCCCCeEEEEE--ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 233 HNQTLVRQFQGHTDGASCIDI--SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 233 ~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
++++.+.. ..|...|.+++| ++++++|++++.|+.|++||+++++. .........+.++.+
T Consensus 116 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----------------~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 116 SSNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP----------------MMVLQLPERCYCADV 178 (368)
T ss_dssp TTTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC----------------SEEEECSSCEEEEEE
T ss_pred CCCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE----------------EEEEecCCCceEEEe
Confidence 99988774 459999999999 88999999999999999999998762 222333445666666
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188 311 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD 390 (504)
Q Consensus 311 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 390 (504)
. ...+++++.++.+.+|+++.............
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------------------------------------- 211 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPL--------------------------------------------- 211 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSC---------------------------------------------
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccc---------------------------------------------
Confidence 5 45788899999999999976532111111111
Q ss_pred cccCCCceEEEEEcCCCC----EEEEeeCCCcEEEeeCCCCCc-ceeecccCCCC------------ceeEEEECCCCCE
Q psy17188 391 CLQRDNYIRSVKLLPDGR----TLIVGGEASNLSIWDLASPTP-RIKAELTSSAP------------ACYALAISPDSKV 453 (504)
Q Consensus 391 ~~~~~~~i~~~~~s~~g~----~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~------------~v~~l~~s~~~~~ 453 (504)
...+.++++.++.. .+++++.||.|++||++.... .....+..|.. .|++++|+|++++
T Consensus 212 ----~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 287 (368)
T 3mmy_A 212 ----KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT 287 (368)
T ss_dssp ----SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC
T ss_pred ----cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE
Confidence 11122333333332 288888888899998886643 23333444443 6999999999999
Q ss_pred EEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 454 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 454 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
|++++.||.|++||+.+++++..+.+|...|++++|+||+++|+++|.|+
T Consensus 288 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 288 LATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred EEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 99999999999999999999999999999999999999999999999986
No 87
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-37 Score=280.59 Aligned_cols=253 Identities=14% Similarity=0.197 Sum_probs=208.8
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD 187 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~ 187 (504)
+|.+.|.+++|+|+|++|++++ |++|+|||++... ...+. .+.+|.+.|.+++|++ ++++|++++.|++|++||
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~--~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLID--TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCE--EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEE--EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 8999999999999999999998 9999999997532 12222 3348999999999986 489999999999999999
Q ss_pred CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccC-------
Q psy17188 188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISAD------- 256 (504)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~------- 256 (504)
+.+++......+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 987755556667889999999999997 8899999999999999998763 24567789999999999996
Q ss_pred ------CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEE
Q psy17188 257 ------GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLS 327 (504)
Q Consensus 257 ------~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~ 327 (504)
+++|++++.|++|++||+++++.... .......|...|.+++|+|++ ++|++++.|++|+
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-----------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-----------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEE-----------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-----------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 56999999999999999987641100 022345688899999999984 8999999999999
Q ss_pred EEeCCCCCccce-eee--ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 328 IWDLASPTPRIK-AEL--TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 328 v~d~~~~~~~~~-~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
+||++....... ..+ ..+...+.+++|+|+++ ++++++.|+.|++|+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC--CEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCC--EEEEEcCCCcEEEEEECC
Confidence 999987532211 122 45677899999999998 799999999999999764
No 88
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.5e-38 Score=294.63 Aligned_cols=278 Identities=14% Similarity=0.190 Sum_probs=213.1
Q ss_pred CCceEEEEEccCCCEEEEecCCC-------cEEEEeCCCCCccc--------eeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188 159 DNYIRSVKLLPDGRTLIVGGEAS-------NLSIWDLASPTPRI--------KAELTSSAPACYALAISPDSKVCFSCC- 222 (504)
Q Consensus 159 ~~~v~~~~~s~~~~~l~~~~~dg-------~i~iw~~~~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~- 222 (504)
..+|++++|+||+++|++|+.+. .|++|++....... ...+..|...+.+++++ ++.++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45799999999999999987533 59999987654321 23456778888888774 44666653
Q ss_pred ----------CCCcEEEEECCCCeE----EEee-----cCCCCCeEEEEEccCCCEEEE--EcCCCeEEEEECCCCceEE
Q psy17188 223 ----------SDGNIAVWDLHNQTL----VRQF-----QGHTDGASCIDISADGTKLWT--GGLDNTVRSWDLREGCVKV 281 (504)
Q Consensus 223 ----------~dg~i~iwd~~~~~~----~~~~-----~~h~~~v~~~~~~~~~~~l~s--~~~dg~i~~wd~~~~~~~~ 281 (504)
.|+.+++|++..... +... ..+...+.+++|+|||+++++ ++.|++|++||+++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~-- 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE-- 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--
Confidence 477899999865421 1111 234556899999999998764 45789999999999874
Q ss_pred EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc
Q psy17188 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP 361 (504)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 361 (504)
.....+...|.+++|+|+|+++++++.+ .+.+|+..++.......
T Consensus 170 --------------~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~-------------------- 214 (365)
T 4h5i_A 170 --------------KFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT-------------------- 214 (365)
T ss_dssp --------------EEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC--------------------
T ss_pred --------------EEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee--------------------
Confidence 2334567789999999999999999755 56666655542111100
Q ss_pred eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC----cEEEeeCCCCCcc--eeecc
Q psy17188 362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----NLSIWDLASPTPR--IKAEL 435 (504)
Q Consensus 362 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg----~i~iwd~~~~~~~--~~~~~ 435 (504)
...|...|.+++|+|+++++++++.|+ .+++|++...... ....+
T Consensus 215 -----------------------------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 215 -----------------------------DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp -----------------------------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -----------------------------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence 012455677999999999999988877 5788887755432 23456
Q ss_pred cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE-eecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
..|...|++++|+|||++||+|+.|++|+|||+++++++..+ .+|...|++++|+|||++|+|||.|+|
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 778889999999999999999999999999999999999885 689999999999999999999999986
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-37 Score=292.24 Aligned_cols=291 Identities=23% Similarity=0.318 Sum_probs=231.4
Q ss_pred cCCCc--EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188 111 SHGEV--VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 188 (504)
Q Consensus 111 ~h~~~--V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 188 (504)
+|... +.+++|++ +.+++++.|+.|++||+.++... .. ....|...|.+++|+|++++|++++.||.|++||+
T Consensus 89 ~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~---~~-~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVS---AL-AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEE---EE-EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEe---Ee-eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 55544 55677775 44565556999999999875322 22 22248899999999999999999999999999999
Q ss_pred CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188 189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 267 (504)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 267 (504)
.+++ ....+..|...|.+++| ++++|++++.|+.|++||++ ....+..+.+|...|.+++|+|++++|++++.|+
T Consensus 164 ~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 164 ESQT--KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TTCC--EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCe--EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 8765 35667799999999999 55699999999999999999 5677888999999999999999999999999999
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEe--CCCcEEEEeCCCCCccceeeecc
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGG--EASNLSIWDLASPTPRIKAELTS 344 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~ 344 (504)
.|++||+++++. ......+...|.+++|+|++. ++++++ .|+.|++||+.+++... .+ .
T Consensus 240 ~v~iwd~~~~~~---------------~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~--~~-~ 301 (401)
T 4aez_A 240 VVQIWDARSSIP---------------KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN--TV-D 301 (401)
T ss_dssp CEEEEETTCSSE---------------EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE--EE-E
T ss_pred eEEEccCCCCCc---------------cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE--EE-e
Confidence 999999998764 233446788899999999764 555554 79999999999875433 33 2
Q ss_pred CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188 345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 424 (504)
Q Consensus 345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~ 424 (504)
+...+.+++|+|+++.++.+++..++.|++||+..... ........|...|.+++|+|++++|++++.||.|++|++
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL---TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE---EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc---eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 45689999999999943333377899999999976422 222234467889999999999999999999999999999
Q ss_pred CCCCcce
Q psy17188 425 ASPTPRI 431 (504)
Q Consensus 425 ~~~~~~~ 431 (504)
.+++...
T Consensus 379 ~~~~~~~ 385 (401)
T 4aez_A 379 YDGDHVK 385 (401)
T ss_dssp CC-----
T ss_pred CCCcccc
Confidence 9876543
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-38 Score=298.30 Aligned_cols=323 Identities=11% Similarity=0.061 Sum_probs=224.3
Q ss_pred CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-
Q psy17188 158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT- 236 (504)
Q Consensus 158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~- 236 (504)
+.+.|++++|+|++++|++++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 5678999999999999999999999999999876435567788999999999999999999999999999999999887
Q ss_pred --EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc-cCCceEEEEEcCC
Q psy17188 237 --LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ-RDNYIRSVKLLPD 313 (504)
Q Consensus 237 --~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 313 (504)
....+.+|...|.+++|+|++++|++++.|+.|++||+++++... ....... |...|.+++|+|+
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW------------VSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC------------CCEEECSSCCSCEEEEEECTT
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce------------eeeEeecccCCCeEEEEEcCC
Confidence 677788899999999999999999999999999999998875100 0112223 7889999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCC----------------ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188 314 GRTLIVGGEASNLSIWDLASPT----------------PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI 377 (504)
Q Consensus 314 ~~~l~~~~~dg~i~v~d~~~~~----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 377 (504)
+++|++++.|+.|++||++... ......+ .|...+.+++|+|+++ ++++++.|+.|++||+
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~--~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN--ALAYAGHDSSVTIAYP 234 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS--CEEEEETTTEEC-CEE
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC--EEEEEeCCCcEEEEEC
Confidence 9999999999999999986332 1223333 7888999999999998 7999999999999999
Q ss_pred CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---------------Cce
Q psy17188 378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---------------PAC 442 (504)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------~~v 442 (504)
........ .......|...|.+++|+|++++|++++.++.+ +|+...........+.... ...
T Consensus 235 ~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (377)
T 3dwl_C 235 SAPEQPPR-ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE 312 (377)
T ss_dssp CSTTSCEE-ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred CCCCCcce-eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence 87654110 022234578889999999999999998766655 7766533222111111110 112
Q ss_pred eEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC-C---EEEEecCCCC
Q psy17188 443 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG-T---KLWTGGLDNT 504 (504)
Q Consensus 443 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~-~---~l~s~s~Dgt 504 (504)
..+.|++....+......|... ........|.+.|+++.+.++. . .|+|+|.||+
T Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~ 371 (377)
T 3dwl_C 313 GPVSFTALRSTFRNMDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGR 371 (377)
T ss_dssp -------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSE
T ss_pred cccccccccccccchhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCc
Confidence 3333333322222222222111 1122234699999999976644 3 6999999985
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-36 Score=275.32 Aligned_cols=279 Identities=14% Similarity=0.244 Sum_probs=238.0
Q ss_pred cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273 (504)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd 273 (504)
.....+.+|...|.+++| +++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 456778899999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188 274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353 (504)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~ 353 (504)
+..... .........|...+.+++| +++++++++.|+.|++|| .......+..|...+.++.
T Consensus 88 ~~~~~~------------~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~ 149 (313)
T 3odt_A 88 LFATSG------------EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAK 149 (313)
T ss_dssp TTCCTT------------SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE----TTEEEEEEECCSSCEEEEE
T ss_pred eeecCC------------CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc----CCcEEEecccCCCceeEEE
Confidence 876531 0012334567888999999 577999999999999999 2255666778888999999
Q ss_pred ECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 354 ISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 354 ~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
+.| +++ .+++++.++.+++||... ... .....+...+.+++|+|++. +++++.||.|++||+++++..
T Consensus 150 ~~~~~~~--~l~~~~~d~~i~i~d~~~-----~~~-~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~-- 218 (313)
T 3odt_A 150 VVSFSEN--KFLTASADKTIKLWQNDK-----VIK-TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL-- 218 (313)
T ss_dssp EEETTTT--EEEEEETTSCEEEEETTE-----EEE-EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE--
T ss_pred EccCCCC--EEEEEECCCCEEEEecCc-----eEE-EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh--
Confidence 998 666 789999999999999432 111 11123778899999999998 999999999999999977544
Q ss_pred ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
..+..|...|++++|+|++ .|++++.||.|++||+.+++++..+..|...|++++|+|+++ +++++.||+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp EEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred hhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence 4456788899999999999 588999999999999999999999999999999999999998 667888874
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-36 Score=288.87 Aligned_cols=288 Identities=20% Similarity=0.312 Sum_probs=234.9
Q ss_pred cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188 115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 194 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 194 (504)
....|+||++ ++||+|.|++|+|||..+++ ....+...+|...|++++|+|+|++|++|+.|+.|+|||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~---~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-- 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGD---ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-- 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCC---EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCC---EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc--
Confidence 4577999975 58888889999999998863 33445556788999999999999999999999999999998765
Q ss_pred ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188 195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273 (504)
Q Consensus 195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd 273 (504)
....+.+|...+.+++++ +.+|++++.|+.+++||... ...+..+.+|...+..+.|+|+++++++++.|+.+++|+
T Consensus 181 ~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 466788999999988874 56999999999999999886 456678899999999999999999999999999999999
Q ss_pred CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEE--EeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188 274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIV--GGEASNLSIWDLASPTPRIKAELTSSAPACY 350 (504)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~ 350 (504)
..+++.. .........+...|.+++|+|.+ ..+++ |+.|+.|++||+.+++. ...+.. ...+.
T Consensus 259 ~~~~~~~-----------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~~-~~~v~ 324 (420)
T 4gga_A 259 SAPGEGG-----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVDA-HSQVC 324 (420)
T ss_dssp SSCCSSC-----------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE--EEEEEC-SSCEE
T ss_pred ecccccc-----------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc--ceeecc-cccee
Confidence 9877521 11123445678889999999965 45554 35799999999998743 333333 34789
Q ss_pred eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc
Q psy17188 351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP 429 (504)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~ 429 (504)
++.|+++++.++.+++..|+.|++||+.+.... .....|...|.+++|+|||++|++|+.|++|++||+....+
T Consensus 325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v-----~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-----AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred eeeecCCCCeEEEEEecCCCEEEEEECCCCcEE-----EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence 999999999755556678999999999865332 22346889999999999999999999999999999976543
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-37 Score=282.49 Aligned_cols=251 Identities=16% Similarity=0.235 Sum_probs=205.7
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD 187 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~ 187 (504)
+|.+.|++++|+|++++|++++ |++|+|||+.++. ......+.+|.+.|.+++|++ ++++|++++.|++|++||
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~---~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG---QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE---EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC---cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 8999999999999999999998 9999999997642 112223448999999999986 489999999999999999
Q ss_pred CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe---EEEeecCCCCCeEEEEEccC------
Q psy17188 188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISAD------ 256 (504)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~------ 256 (504)
+++++......+.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 987655556677889999999999997 7899999999999999998763 24566789999999999997
Q ss_pred -----------CCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCC----CEEEEE
Q psy17188 257 -----------GTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG----RTLIVG 320 (504)
Q Consensus 257 -----------~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~ 320 (504)
+++|++++.|++|++||++.+. ... ......|...|.+++|+|++ ++|+++
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~-------------~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE-------------EQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE-------------EECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccce-------------eeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 4689999999999999997542 111 22345688899999999986 899999
Q ss_pred eCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 321 GEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
+.|++|++|+++.... .....+..+...+.+++|+|+++ ++++++.|+.|++|+...
T Consensus 235 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~--~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN--ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC--CEEEEESSSCEEEEEECT
T ss_pred cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC--EEEEEcCCCeEEEEEECC
Confidence 9999999999876321 12233456778999999999998 799999999999999753
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.6e-37 Score=282.35 Aligned_cols=256 Identities=15% Similarity=0.211 Sum_probs=208.6
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECC
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLH 233 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~ 233 (504)
.+|.+.|++++|+|++++||+|+.|++|+|||+.+++......+.+|...|.+++|++ ++++|++++.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 3799999999999999999999999999999998765445677889999999999986 48899999999999999999
Q ss_pred CC--eEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188 234 NQ--TLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSV 308 (504)
Q Consensus 234 ~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 308 (504)
++ +....+.+|...|.+++|+|+ +.+|++++.|++|++||++.+. ... ......|...+.++
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~-------------~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV-------------KKINNAHTIGCNAV 156 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE-------------CCBTTSSSSCBCCC
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce-------------eeeeccccCCcceE
Confidence 87 466778899999999999997 7899999999999999998753 110 11223566778899
Q ss_pred EEcCC-----------------CCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCC--CceeeeccC
Q psy17188 309 KLLPD-----------------GRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSK--SPFFSSHHY 368 (504)
Q Consensus 309 ~~~~~-----------------~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~ 368 (504)
+|+|+ +++|++++.|+.|++||++... ......+..|...|.+++|+|++. ..++++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 99987 4789999999999999997542 234566788999999999999872 138999999
Q ss_pred CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 369 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
|+.|++|+++........ ......+...|.+++|+|++++|++++.|+.|++|+..
T Consensus 237 D~~v~iw~~~~~~~~~~~-~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWS-PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCEEEEEECSSTTCCCCB-CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEccCccccchh-hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999998763211110 11123467889999999999999999999999999975
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=291.74 Aligned_cols=305 Identities=14% Similarity=0.238 Sum_probs=226.2
Q ss_pred ecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC-----Cce-eeeeecCCC------------CceEEEEEccC
Q psy17188 110 LSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK-----TPV-SQLDCLQRD------------NYIRSVKLLPD 170 (504)
Q Consensus 110 ~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~-----~~~-~~~~~~~~~------------~~v~~~~~s~~ 170 (504)
+.|.+.|++++|+|++++|++++ ||.|+|||+.++... ... ......+|. ..|++++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 46789999999999999999998 999999999875421 111 122333677 88999999999
Q ss_pred C--CEEEEecCCCcEEEEeCCCCCccc--------------------------------------eeeeecCcCceEEEE
Q psy17188 171 G--RTLIVGGEASNLSIWDLASPTPRI--------------------------------------KAELTSSAPACYALA 210 (504)
Q Consensus 171 ~--~~l~~~~~dg~i~iw~~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~ 210 (504)
+ .+|++++.|+.|++||+.+.+... .....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 799999999999999987532210 011357999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEECCC-CeEEE-------eecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCce--
Q psy17188 211 ISPDSKVCFSCCSDGNIAVWDLHN-QTLVR-------QFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCV-- 279 (504)
Q Consensus 211 ~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~-- 279 (504)
|+|++++|+++ .|+.|++||+++ ++.+. .+.+|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 799999999994 44444 366899999999999998 8999999999999999998763
Q ss_pred ---EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCccceeeeccCCCc-------
Q psy17188 280 ---KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPA------- 348 (504)
Q Consensus 280 ---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~------- 348 (504)
..+...... ........+...|.+++|+|++++|++++. +.|++||++. .+ ....+..|...
T Consensus 264 ~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~--~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 264 RHSKLFEEPEDP----SNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR--PVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp TTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS--CSCCEESCGGGTTTHHHH
T ss_pred ceeeEeccCCCc----cccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc--ccceeecccccccccccc
Confidence 221111000 000011123348999999999999999999 9999999986 43 33334444321
Q ss_pred --------eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc---------------------------ccccccc
Q psy17188 349 --------CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV---------------------------SQLDCLQ 393 (504)
Q Consensus 349 --------i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~---------------------------~~~~~~~ 393 (504)
+..++|+|+++ ++++++.|+.|++||+......... .......
T Consensus 337 ~~~~~i~~~~~~~~s~~~~--~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDS--VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLD 414 (447)
T ss_dssp HHTSGGGCCCCEEECTTSS--EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCC
T ss_pred ccccccccceEEEECCCCC--EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccc
Confidence 23499999998 7899999999999999865321100 0011223
Q ss_pred CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
....|..++|+|++.+||+++.++ +++|..+
T Consensus 415 ~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 415 FNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 456788999999999999998776 8888643
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=298.53 Aligned_cols=347 Identities=13% Similarity=0.177 Sum_probs=254.3
Q ss_pred CCcceEEEECC-CCCcccCCCCCCcccCCCCCc---c--ccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCC-
Q psy17188 71 GKPAYSYHVTT-DGQMQPVPFPPDALIGPGIPR---H--ARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDIS- 142 (504)
Q Consensus 71 ~~~v~~~~~s~-~g~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~- 142 (504)
.+.|.+++|+| +++.++.+..++.+.+|+... . .+....++|...|.+++|+|++++|++++ |+.|++||++
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 57899999999 999999999999999888654 2 22345558999999999999999999988 9999999985
Q ss_pred --CCCCCC-----ceeeeeecC--CCCceEEEE--EccCCCEEEEecCCCcEEEEeCCCCCccceeeeec--CcCceEEE
Q psy17188 143 --QPGSKT-----PVSQLDCLQ--RDNYIRSVK--LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS--SAPACYAL 209 (504)
Q Consensus 143 --~~~~~~-----~~~~~~~~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~v~~~ 209 (504)
.+.... .+..+.... +...+.++. +++++++|++++.|+.|++||+.+++. ...+.. |...|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~ 220 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER--LQIIENSPRHGAVSSI 220 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE--EEEEECCGGGCCEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee--eEEEccCCCCCceEEE
Confidence 322111 112222222 667788888 668999999999999999999987664 445555 88999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEcc----CCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188 210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISA----DGTKLWTGGLDNTVRSWDLREGCVKVWDI 284 (504)
Q Consensus 210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 284 (504)
+|+|++++|++++.||.|++||+++++.+..+. .|...|.+++|+| ++.+|++++.||.|++||+++++.
T Consensus 221 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----- 295 (437)
T 3gre_A 221 CIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC----- 295 (437)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE-----
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE-----
Confidence 999999999999999999999999999999886 6888999997665 577999999999999999998875
Q ss_pred cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188 285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS 364 (504)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 364 (504)
......+...+..+.|+|+++.+ .+.. ..-..|...|.+++|+ +++ +++
T Consensus 296 ----------~~~~~~~~~~~~~~~~~~~~~~l----~~~~--------------~~~~~~~~~v~~l~~~-~~~--~l~ 344 (437)
T 3gre_A 296 ----------QYAFINSDEQPSMEHFLPIEKGL----EELN--------------FCGIRSLNALSTISVS-NDK--ILL 344 (437)
T ss_dssp ----------EEEEESSSSCCCGGGGSCBCSSG----GGCC--------------CCCCCSGGGGCCEEEE-TTE--EEE
T ss_pred ----------EEEEEcCCCCCccceeccccccc----ccce--------------ecccccCCceEEEEEC-Cce--EEE
Confidence 22334455566666677765544 0000 1112366789999999 554 789
Q ss_pred eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188 365 SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 444 (504)
Q Consensus 365 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 444 (504)
+++.|+.|++||+..+.....+... ......+....++++..+++.. |+...... ......|...|++
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~~~h~~~I~~ 412 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVISP--SRFSDVFIPTQVTANLTMLLRK--------MKRTSTHS--VDDSLYHHDIINS 412 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEECC----CCCEEEEEEEETTEEEEEEE--------CC---------------CCCEEE
T ss_pred ecCCCCeEEEEECCCcccceEEecc--cccCceEEEEEeecceEEEEEe--------cccccccc--cCcccccccceee
Confidence 9999999999999875433322211 1123445566677666555544 22222221 2334568889999
Q ss_pred EEECCC--CCEEEEeeCCCcEEEEE
Q psy17188 445 LAISPD--SKVCFSCCSDGNIAVWD 467 (504)
Q Consensus 445 l~~s~~--~~~l~s~~~dg~i~iwd 467 (504)
++|+++ +.+|++|+.||.|+||+
T Consensus 413 i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 413 ISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EeeeccCCceEEEEEcCCceEEEeC
Confidence 999998 78999999999999995
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=274.26 Aligned_cols=285 Identities=20% Similarity=0.295 Sum_probs=232.7
Q ss_pred EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc
Q psy17188 116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 195 (504)
Q Consensus 116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 195 (504)
..+|+||+++ +||+|.|++|+|||+++++ .+..+...+|...|++++|+|++++|++|+.|++|++||+++++ .
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~---~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGD---ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--R 101 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCC---EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--E
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCC---EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce--e
Confidence 4679999886 8888889999999998863 34455566889999999999999999999999999999999765 3
Q ss_pred eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188 196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~ 274 (504)
...+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+..+.+.+++++|++++.|+.|++||+
T Consensus 102 ~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 6677889888877665 5669999999999999998865 566778899999999999999999999999999999999
Q ss_pred CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE---EEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188 275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL---IVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 351 (504)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~ 351 (504)
++++.. .........+...+.++.++|++..+ ++++.++.|++||...... .....+...+..
T Consensus 180 ~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---~~~~~~~~~v~~ 245 (318)
T 4ggc_A 180 APGEGG-----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAVDAHSQVCS 245 (318)
T ss_dssp SCBTTB-----------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---EEEEECSSCEEE
T ss_pred CCCccc-----------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---cccccceeeeee
Confidence 876521 11133344567789999999976533 3556789999999887643 233445568999
Q ss_pred EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188 352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~ 427 (504)
+.++++++..++++++.|+.|++||+++..... ....|...|++++|+|+|++|++++.||+|+|||+.+.
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~-----~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA-----ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEE-----EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeecccccceEEEEEcCCCEEEEEECCCCcEEE-----EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999997666677789999999998754322 23468899999999999999999999999999998754
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=291.94 Aligned_cols=294 Identities=12% Similarity=0.192 Sum_probs=225.5
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEeecCCC------------CCeEEEEEccCC
Q psy17188 201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----------LVRQFQGHT------------DGASCIDISADG 257 (504)
Q Consensus 201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~ 257 (504)
.+...|++++|+|++++|++|+.||.|++||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 457789999999999999999999999999999877 578889998 889999999998
Q ss_pred --CEEEEEcCCCeEEEEECCCCceEEEeecCCCCC---------C--Ccc--------------cceecccCCceEEEEE
Q psy17188 258 --TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK---------T--PVS--------------QLDCLQRDNYIRSVKL 310 (504)
Q Consensus 258 --~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~---------~--~~~--------------~~~~~~~~~~v~~~~~ 310 (504)
.+|++++.|++|++||+.++............. . ... ......|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999998755321111100000 0 000 0112468889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCcccee------eeccCCCceeeEEECCCC-CCceeeeccCCCeEEEEecCCCCCC
Q psy17188 311 LPDGRTLIVGGEASNLSIWDLASPTPRIKA------ELTSSAPACYALAISPDS-KSPFFSSHHYKSCVKVWDISQPGSK 383 (504)
Q Consensus 311 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~i~i~d~~~~~~~ 383 (504)
+|++++|+++ .|+.|++||++........ .+..|...+.+++|+|++ . ++++++.|+.|++||++.....
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN--TFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT--EEEEEETTSCEEEEETTTCSSS
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc--EEEEEeCCCeEEEEECcCCccc
Confidence 9999999998 8999999999843222111 356788899999999998 5 8999999999999999876531
Q ss_pred C-cccccccccCC------------CceEEEEEcCCCCEEEEeeCCCcEEEeeCCC-CCcceeecccCCCCc--------
Q psy17188 384 T-PVSQLDCLQRD------------NYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPA-------- 441 (504)
Q Consensus 384 ~-~~~~~~~~~~~------------~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~-------- 441 (504)
. ....+ ..+. ..|.+++|+|++++|++++. +.|++||+++ ++..... ..|...
T Consensus 263 ~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~--~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 263 DRHSKLF--EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY--QVHEYLRSKLCSLY 337 (447)
T ss_dssp CTTCEEE--CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE--ESCGGGTTTHHHHH
T ss_pred cceeeEe--ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee--eccccccccccccc
Confidence 1 11111 1233 38999999999999999998 9999999986 5444333 333221
Q ss_pred -------eeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee---------------------------------cC
Q psy17188 442 -------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---------------------------------HT 481 (504)
Q Consensus 442 -------v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------h~ 481 (504)
+..++|+|++++|++++.||.|++||+.+++.+. +.. +.
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFN 416 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTT
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccC
Confidence 2348999999999999999999999999988753 332 23
Q ss_pred CceEEEEEccCCCEEEEecCCC
Q psy17188 482 DGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 482 ~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
..|..++|+|++++|++++.|+
T Consensus 417 ~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 417 KKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp SCCCEEEECSSSSEEEEECSSC
T ss_pred CceeEEEECCCCCEEEEEecce
Confidence 5688999999999999999875
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-36 Score=280.66 Aligned_cols=291 Identities=14% Similarity=0.160 Sum_probs=235.8
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC-EEEEecCCCcEEEEeC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDL 188 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~ 188 (504)
+|.+.|++++|+|++++|++++ |+.|++|++.++....... ....|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 7999999999999999999888 9999999998754222222 3337899999999999999 9999999999999999
Q ss_pred -CCCCccceeeeec--CcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccC
Q psy17188 189 -ASPTPRIKAELTS--SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 189 -~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~ 256 (504)
.+++ ...+.. |...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. |...|.+++|+|+
T Consensus 87 ~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 87 IGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred ccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 7664 356677 999999999999 99999999999999999988 77777777 9999999999988
Q ss_pred CCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC
Q psy17188 257 GTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASP 334 (504)
Q Consensus 257 ~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~ 334 (504)
+ +++++.|+.|++||+++ +.... ......+...+.+++|+| +++++++++.||.+++|+++..
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~~~-------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDDNG-------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTCCC-------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred c--EEEEeCCCeEEEEECCccccccc-------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 7 99999999999999987 54210 223345677899999999 9999999999999999998765
Q ss_pred --C--ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE
Q psy17188 335 --T--PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL 410 (504)
Q Consensus 335 --~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 410 (504)
. ......+..|... .....+...|.+++|+|++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~i~~~~~s~~~~~l 266 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLN----------------------------------------LKDTNLAYPVNSIEFSPRHKFL 266 (342)
T ss_dssp CCSTTCTTCEEEECCCCC----------------------------------------TTCCSSCCCEEEEEECTTTCCE
T ss_pred Ccccccccceeeeccccc----------------------------------------ccccccceeEEEEEEcCCCCEE
Confidence 1 0111111111100 0011356679999999999999
Q ss_pred EEeeCCCcEEEeeCCCCCcceeecccCC-CCceeEEEECCCCCEEEEeeCCCc-EEEEE
Q psy17188 411 IVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGN-IAVWD 467 (504)
Q Consensus 411 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~~~~~l~s~~~dg~-i~iwd 467 (504)
++++.||.|++||+.+++. ...+..| ...|++++ |++++|++++.||. .+.|.
T Consensus 267 ~~~~~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 267 YTAGSDGIISCWNLQTRKK--IKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEETTSCEEEEETTTTEE--EEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred EEecCCceEEEEcCccHhH--hhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 9999999999999997754 4446666 88999999 99999999999998 55554
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=286.35 Aligned_cols=256 Identities=16% Similarity=0.284 Sum_probs=223.1
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCC
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHN 234 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~ 234 (504)
+|.+.|++++|+|++++|++++.|+.|++||+..........+.+|...|++++|+++ +++|++++.||.|++||+.+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 7999999999999999999999999999999986665667778899999999999987 89999999999999999999
Q ss_pred Ce--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 235 QT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 235 ~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++... .......+...|.+++|
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-------------~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSASW 155 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC-------------CEEEEECCTTCEEEEEE
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce-------------eeEEecCCCCceEEEEE
Confidence 87 77888889999999999998 999999999999999999887421 13344567888999999
Q ss_pred cC-------------CCCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCC---CCCceeeeccCCCeE
Q psy17188 311 LP-------------DGRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPD---SKSPFFSSHHYKSCV 372 (504)
Q Consensus 311 ~~-------------~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~i 372 (504)
+| ++++|++++.|+.|++||+++.... ....+..|...+.+++|+|+ +. ++++++.|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~dg~i 233 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YLASVSQDRTC 233 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEETTSCE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC--eEEEEeCCCEE
Confidence 99 6999999999999999999876533 44567788899999999999 56 89999999999
Q ss_pred EEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188 373 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~ 427 (504)
++||++...............+...|.+++|+|++++|++++.||.|++|++...
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9999987654444444444557889999999999999999999999999999754
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.4e-36 Score=278.26 Aligned_cols=313 Identities=11% Similarity=0.148 Sum_probs=229.3
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEE
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWD 231 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd 231 (504)
.+|.+.|++++|+|++++|++++.||.|++||+.++.. .....+.+|...|.+++|+| ++++|++++.|+.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 38999999999999999999999999999999986543 34566788999999999999 689999999999999999
Q ss_pred CCCC---------eEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceE-EEeecCCCCCCCcccceec
Q psy17188 232 LHNQ---------TLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVK-VWDISQPGSKTPVSQLDCL 299 (504)
Q Consensus 232 ~~~~---------~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~ 299 (504)
++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.. .+..... .........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~ 164 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE---MKVLSIPPA 164 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE---EESCSCCCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc---ccccccccC
Confidence 9987 668888899999999999999 999999999999999999877521 0000000 000011223
Q ss_pred ccCCceEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC--ceeeeccCCCeEEE
Q psy17188 300 QRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS--PFFSSHHYKSCVKV 374 (504)
Q Consensus 300 ~~~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~i~i 374 (504)
.+...+.+++|+|+ +..+++++.++.+.+|+...........+..|...|.+++|+|++.. .++++++.|+.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 56778999999997 89999999999998888887766667778889999999999999832 38999999999999
Q ss_pred EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee----CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188 375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD 450 (504)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~ 450 (504)
||++......... ...........++....+..+. ....+.+|+.... .....+.+|...|++++|+|+
T Consensus 245 wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 245 FKITEKLSPLASE-----ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV--ELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp EEEEECC--------------------------------------------CCSEEE--EEEEEECTTSSCEEEEEECSS
T ss_pred EeCCCCcCccccC-----CcccceeccCCCcccccccccccccccceeeeecccccc--cEEEEEecccccEEEEEEcCC
Confidence 9998653322211 1122223333444444444333 2334555554432 344556788899999999999
Q ss_pred CCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188 451 SKVCFSCCSDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 451 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 478 (504)
+++|++++.||.|++|++.+++.+..+.
T Consensus 318 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp SCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCcEEEEecCcCcchhhee
Confidence 9999999999999999999887655544
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-36 Score=286.73 Aligned_cols=290 Identities=16% Similarity=0.251 Sum_probs=233.9
Q ss_pred EEEEEcCCCcEEEE-ec-CCeEEEEeCCCCCCC-CceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCC
Q psy17188 117 CAVTISNPTKYVYT-GG-KGCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT 192 (504)
Q Consensus 117 ~~v~~s~~~~~l~~-~~-d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~ 192 (504)
..++++|+...++. ++ ||.|+||++...+.. ..+.. ..+|.+.|++++|+| ++++|++++.||.|++||+.++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPL--VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCC--BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCce--EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 45788888765553 44 999999999654222 22222 337999999999999 99999999999999999998764
Q ss_pred c-----cceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEee--cCCCCCeEEEEEccCCCEEEEEc
Q psy17188 193 P-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISADGTKLWTGG 264 (504)
Q Consensus 193 ~-----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~ 264 (504)
. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 3 3466788999999999999998 69999999999999999999999999 88999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCccccee-cccCC-ceEEEEEcCCCCEEEEE---eCCCcEEEEeCCCCCccce
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDN-YIRSVKLLPDGRTLIVG---GEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~v~~~~~~~~~~~l~~~---~~dg~i~v~d~~~~~~~~~ 339 (504)
.|+.|++||+++++.. ... ..+.. .+.++.|+|++++|+++ +.|+.|++||+++.+....
T Consensus 196 ~d~~i~iwd~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVV---------------AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS 260 (402)
T ss_dssp TTSEEEEEETTTTEEE---------------EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred cCCcEEEEeCCCCcee---------------eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence 9999999999988742 111 23443 38899999999999999 7899999999998765344
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
.....+...+..++|+|+++. ++++++.|+.|++||+..... .+..+....+...+.+++|+|++.++++ .++.+
T Consensus 261 ~~~~~~~~~v~~~~~s~~~~~-l~~~g~~dg~i~i~d~~~~~~--~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~ 335 (402)
T 2aq5_A 261 LQELDTSSGVLLPFFDPDTNI-VYLCGKGDSSIRYFEITSEAP--FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIA 335 (402)
T ss_dssp EEECCCCSSCEEEEEETTTTE-EEEEETTCSCEEEEEECSSTT--CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEE
T ss_pred EEeccCCCceeEEEEcCCCCE-EEEEEcCCCeEEEEEecCCCc--ceEeecccccCCcccceEEeccccccee--cceeE
Confidence 444456678999999999984 445677899999999987542 1223333346788999999999998765 56689
Q ss_pred EEeeCCCCC
Q psy17188 420 SIWDLASPT 428 (504)
Q Consensus 420 ~iwd~~~~~ 428 (504)
++|++.++.
T Consensus 336 ~~~~l~~~~ 344 (402)
T 2aq5_A 336 RFYKLHERK 344 (402)
T ss_dssp EEEEEETTE
T ss_pred EEEEcCCCc
Confidence 999998654
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=279.49 Aligned_cols=259 Identities=15% Similarity=0.216 Sum_probs=221.5
Q ss_pred eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEE
Q psy17188 196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRS 271 (504)
Q Consensus 196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~ 271 (504)
...+.+|...|++++|+|++++|++++.||.|++||+. +++.+..+.+|...|.+++|+++ +++|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45678999999999999999999999999999999998 66788889999999999999976 899999999999999
Q ss_pred EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 349 (504)
Q Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i 349 (504)
||+.+++... ......+...|.+++|+|+ +++|++++.|+.|++||++.........+..|...+
T Consensus 84 wd~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 84 WKEENGRWSQ-------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp EEEETTEEEE-------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred EEcCCCceeE-------------eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 9999886321 3334457788999999999 999999999999999999988766777778899999
Q ss_pred eeEEECC-------------CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEe
Q psy17188 350 YALAISP-------------DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVG 413 (504)
Q Consensus 350 ~~~~~~~-------------~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~ 413 (504)
.+++|+| ++. ++++++.|+.|++||++....... .......|...|.+++|+|+ +++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR--KFVTGGADNLVKIWKYNSDAQTYV-LESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp EEEEECCCC----------CTTC--EEEEEETTSCEEEEEEETTTTEEE-EEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCC--EEEEEeCCCeEEEEEecCCCccee-eEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 9999999 455 899999999999999986532211 12233457889999999999 8999999
Q ss_pred eCCCcEEEeeCCCCCc---ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 414 GEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 414 ~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+.||.|++||++++.. ........+...|++++|+|++++|++++.||.|++|++..
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 9999999999987652 23334455788899999999999999999999999999874
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=275.64 Aligned_cols=306 Identities=14% Similarity=0.222 Sum_probs=232.8
Q ss_pred ccceeee-cCCCcEEEEEEcCC---CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec
Q psy17188 104 ARQINTL-SHGEVVCAVTISNP---TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 178 (504)
Q Consensus 104 ~~~~~~~-~h~~~V~~v~~s~~---~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 178 (504)
.+.+..+ +|.+.|++++|+|+ +++|++++ |+.|+|||+++.+. .......+|...|.+++|+|++++|++++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 3445555 89999999999999 59999988 99999999986321 11123337899999999999999999999
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEE--CCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 256 (504)
.|+.|++||+.+++ ...+..|...|.+++| ++++++|++++.|+.|++||+++++.+..+..+. .+.++.+.+
T Consensus 106 ~dg~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~- 180 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQ---AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY- 180 (368)
T ss_dssp TTSEEEEEETTTTE---EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET-
T ss_pred CCCcEEEEEcCCCC---ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC-
Confidence 99999999998765 3346779999999999 8999999999999999999999999988888654 666776664
Q ss_pred CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE----EEEEeCCCcEEEEeCC
Q psy17188 257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT----LIVGGEASNLSIWDLA 332 (504)
Q Consensus 257 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~dg~i~v~d~~ 332 (504)
..+++++.++.+++|+++......... .........++.+.++... +++++.|+.|++||++
T Consensus 181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 181 -PMAVVATAERGLIVYQLENQPSEFRRI-------------ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp -TEEEEEEGGGCEEEEECSSSCEEEEEC-------------CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred -CeeEEEeCCCcEEEEEeccccchhhhc-------------cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 478889999999999998765432111 1122334555555554443 9999999999999998
Q ss_pred CCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188 333 SPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411 (504)
Q Consensus 333 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 411 (504)
.... .....+..|.... .......+...|.+++|+|++++|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~sp~~~~l~ 289 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNG-------------------------------------TNTSAPQDIYAVNGIAFHPVHGTLA 289 (368)
T ss_dssp CSCHHHHSEEEECSEEC-----------------------------------------CCCEEECCEEEEEECTTTCCEE
T ss_pred CCCccccceeeeeeeccc-------------------------------------ccccccccccceEEEEEecCCCEEE
Confidence 7633 2222222221100 0001113345788999999999999
Q ss_pred EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+++.||.|++||+.+++. ...+..|...|++++|+|++++|++++.|+..+.|++.+
T Consensus 290 s~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDARTK--LKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EEETTSCEEEEETTTTEE--EEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred EEccCCeEEEEECCCCcE--EEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999999999999997644 455667888999999999999999999988666555443
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.8e-36 Score=282.01 Aligned_cols=289 Identities=16% Similarity=0.223 Sum_probs=233.3
Q ss_pred ceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCc--cceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCC-
Q psy17188 161 YIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQ- 235 (504)
Q Consensus 161 ~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~- 235 (504)
....++++|+...++ +++.||.|+||++..... .....+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 344678888765544 478899999999965422 23445778999999999999 8999999999999999999988
Q ss_pred ------eEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee--cccCCceE
Q psy17188 236 ------TLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC--LQRDNYIR 306 (504)
Q Consensus 236 ------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 306 (504)
+.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.. ... ..|...|.
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---------------~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV---------------LTLGPDVHPDTIY 180 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE---------------EEECTTTCCSCEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc---------------EEEecCCCCCceE
Confidence 5678889999999999999997 69999999999999999988742 222 45788999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-ccCCCc-eeeEEECCCCCCceeeec---cCCCeEEEEecCCCC
Q psy17188 307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPA-CYALAISPDSKSPFFSSH---HYKSCVKVWDISQPG 381 (504)
Q Consensus 307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~---~~~~~i~i~d~~~~~ 381 (504)
+++|+|++++|++++.|+.|++||+++++ ....+ ..|... +..+.|+|++. +++++ +.++.|++||++...
T Consensus 181 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 181 SVDWSRDGALICTSCRDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSEGK--ILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECSTTE--EEEEEECTTCCEEEEEEETTBCS
T ss_pred EEEECCCCCEEEEEecCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCCCc--EEEEeccCCCCceEEEEcCcccc
Confidence 99999999999999999999999999864 33344 455444 89999999987 78887 789999999998754
Q ss_pred CCCcccccccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeCCCCCc-ceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188 382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKVCFSCCS 459 (504)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~ 459 (504)
..... ....+...+.+++|+|++++|++ ++.|+.|++||+.+++. ........+...+.+++|+|++.++++ .
T Consensus 257 ~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~ 331 (402)
T 2aq5_A 257 EPLSL---QELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--K 331 (402)
T ss_dssp SCSEE---EECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--G
T ss_pred CCceE---EeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--c
Confidence 32211 22346677999999999999975 55799999999998774 333333346788999999999998775 4
Q ss_pred CCcEEEEEcCCcce
Q psy17188 460 DGNIAVWDLHNQTL 473 (504)
Q Consensus 460 dg~i~iwd~~~~~~ 473 (504)
++.+++|++.++++
T Consensus 332 ~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 332 CEIARFYKLHERKC 345 (402)
T ss_dssp TEEEEEEEEETTEE
T ss_pred ceeEEEEEcCCCcE
Confidence 66899999988754
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.8e-35 Score=280.82 Aligned_cols=296 Identities=15% Similarity=0.316 Sum_probs=231.9
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 236 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 236 (504)
+|...|.+++| ++++|++|+.||.|++||+.+++ ....+.+|...|.+++| ++++|++|+.||.|++||+.+++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 56678988877 79999999999999999998765 36678899999999999 78899999999999999999999
Q ss_pred EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188 237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 316 (504)
Q Consensus 237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 316 (504)
.+..+.+|...|.+++|++ ..+++++.||.|++||+++++.... ......|...|.++++ ++++
T Consensus 205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~------------~~~~~~~~~~v~~~~~--~~~~ 268 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITL------------RRVLVGHRAAVNVVDF--DDKY 268 (435)
T ss_dssp EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEE------------EEEECCCSSCEEEEEE--ETTE
T ss_pred EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCcee------------eeEecCCCCcEEEEEe--CCCE
Confidence 9999999999999999974 5999999999999999988753110 1334567888999999 7889
Q ss_pred EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188 317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN 396 (504)
Q Consensus 317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (504)
+++++.||.|++||++++ .....+..|...+.++.+.+ . ++++++.|+.|++||++++... .....|..
T Consensus 269 l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~--~--~l~~g~~dg~i~iwd~~~~~~~-----~~~~~h~~ 337 (435)
T 1p22_A 269 IVSASGDRTIKVWNTSTC--EFVRTLNGHKRGIACLQYRD--R--LVVSGSSDNTIRLWDIECGACL-----RVLEGHEE 337 (435)
T ss_dssp EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEEET--T--EEEEEETTSCEEEEETTTCCEE-----EEECCCSS
T ss_pred EEEEeCCCeEEEEECCcC--cEEEEEcCCCCcEEEEEeCC--C--EEEEEeCCCeEEEEECCCCCEE-----EEEeCCcC
Confidence 999999999999999887 45566778888999999853 3 8999999999999999875322 22235788
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
.|.+++| ++++|++|+.||.|++||+.++.. .....+..|...|++++| ++++|++++.||.|++||+.
T Consensus 338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 8999999 788999999999999999865431 145566788899999999 78899999999999999998
Q ss_pred CcceEEEEeecCCceEEEEEc
Q psy17188 470 NQTLVRQFQGHTDGASCIDIS 490 (504)
Q Consensus 470 ~~~~~~~~~~h~~~v~~~~~s 490 (504)
+........ ...+..++.|.
T Consensus 414 ~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 414 NDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp ---------------------
T ss_pred CCCCcccCC-CCCCccceeee
Confidence 876654443 23345555554
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.8e-35 Score=273.38 Aligned_cols=297 Identities=15% Similarity=0.199 Sum_probs=215.5
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD 187 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~ 187 (504)
+|.+.|++++|+|++++|++++ |+.|++||+.++..... ......+|...|.+++|+| ++++|++++.|+.|++||
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE-LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 8999999999999999999998 99999999987533211 2223347999999999999 699999999999999999
Q ss_pred CCCCCc-------cceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEeec-------------CCC
Q psy17188 188 LASPTP-------RIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------------GHT 245 (504)
Q Consensus 188 ~~~~~~-------~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~h~ 245 (504)
+.+++. .....+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+. .|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 987643 335667789999999999999 9999999999999999999876544432 588
Q ss_pred CCeEEEEEccC---CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC----CEEE
Q psy17188 246 DGASCIDISAD---GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG----RTLI 318 (504)
Q Consensus 246 ~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~ 318 (504)
..+.+++|+|+ +.++++++.|+.+.+|+...++... ......|...|.+++|+|++ ++|+
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~ 234 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV-------------AAKLPGHKSLIRSISWAPSIGRWYQLIA 234 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE-------------EEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee-------------eeecCCCCcceeEEEECCCCCCcceEEE
Confidence 89999999997 8999999999999888888776432 22334578889999999998 8999
Q ss_pred EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc----CCCeEEEEecCCCCCCCcccccccccC
Q psy17188 319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH----YKSCVKVWDISQPGSKTPVSQLDCLQR 394 (504)
Q Consensus 319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~i~i~d~~~~~~~~~~~~~~~~~~ 394 (504)
+++.||.|++||++....... ..............+... ....+. ....+.+|+... .........|
T Consensus 235 s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h 305 (351)
T 3f3f_A 235 TGCKDGRIRIFKITEKLSPLA--SEESLTNSNMFDNSADVD--MDAQGRSDSNTEEKAELQSNLQ-----VELLSEHDDH 305 (351)
T ss_dssp EEETTSCEEEEEEEECC-------------------------------------------CCSEE-----EEEEEEECTT
T ss_pred EEcCCCeEEEEeCCCCcCccc--cCCcccceeccCCCcccc--cccccccccccceeeeeccccc-----ccEEEEEecc
Confidence 999999999999986532221 111111222222222222 122221 122233332211 1112223357
Q ss_pred CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc
Q psy17188 395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 430 (504)
Q Consensus 395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~ 430 (504)
...|++++|+|++++|++++.||.|++||+.+++..
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 889999999999999999999999999999876543
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6e-35 Score=279.46 Aligned_cols=280 Identities=18% Similarity=0.344 Sum_probs=227.4
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
+|...|.++++ ++++|++++ ||.|++||+.+++. .. ...+|...|.+++| ++++|++|+.||.|++||+.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~---~~--~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC---KR--ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE---EE--EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE---EE--EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 67788999987 688898888 99999999987532 22 23379999999999 78999999999999999999
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE---EeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV---RQFQGHTDGASCIDISADGTKLWTGGLD 266 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d 266 (504)
+++. ...+..|...|.+++|++ .++++++.|+.|++||+.+++.. ..+.+|...|.+++| ++++|++++.|
T Consensus 202 ~~~~--~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 202 TGEM--LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SCCE--EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCcE--EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 7653 667788999999999974 49999999999999999987654 677889999999999 67899999999
Q ss_pred CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188 267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA 346 (504)
Q Consensus 267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 346 (504)
|.|++||+++++. ......|...+.++.+ +++++++++.||.|++||++++ .....+..|.
T Consensus 276 g~i~vwd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~ 336 (435)
T 1p22_A 276 RTIKVWNTSTCEF---------------VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHE 336 (435)
T ss_dssp SEEEEEETTTCCE---------------EEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--CEEEEECCCS
T ss_pred CeEEEEECCcCcE---------------EEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC--CEEEEEeCCc
Confidence 9999999998874 2333467788999988 4689999999999999999987 4556677888
Q ss_pred CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc----ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP----VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 422 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw 422 (504)
..+.++++ ++. ++++++.|+.|++||+........ ........|...|.+++| ++++|++++.||.|++|
T Consensus 337 ~~v~~~~~--~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iw 410 (435)
T 1p22_A 337 ELVRCIRF--DNK--RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 410 (435)
T ss_dssp SCEEEEEC--CSS--EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEE
T ss_pred CcEEEEEe--cCC--EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEE
Confidence 89999999 444 899999999999999865432111 122334568889999999 78899999999999999
Q ss_pred eCCCCCcc
Q psy17188 423 DLASPTPR 430 (504)
Q Consensus 423 d~~~~~~~ 430 (504)
|+.+....
T Consensus 411 d~~~~~~~ 418 (435)
T 1p22_A 411 DFLNDPAA 418 (435)
T ss_dssp C-------
T ss_pred ECCCCCCc
Confidence 99876543
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-36 Score=303.43 Aligned_cols=258 Identities=16% Similarity=0.274 Sum_probs=222.9
Q ss_pred cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECC
Q psy17188 156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLH 233 (504)
Q Consensus 156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~ 233 (504)
.+|.+.|++++|+|++++|++|+.||.|++||+..+.......+.+|...|++++|+++ +++|++++.||.|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 38999999999999999999999999999999986666667788899999999999988 8999999999999999999
Q ss_pred CCe--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 234 NQT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 234 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
+++ .+..+.+|...|.+++|+|+ ++.+++++.||.|++||++++... .......+...|.+++
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-------------~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSAS 152 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-------------CCEEEECCSSCEEEEE
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-------------ceeEeecCCCceEEEE
Confidence 987 77888899999999999998 999999999999999999877321 1334456788999999
Q ss_pred EcC-------------CCCEEEEEeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCC---CCCceeeeccCCCe
Q psy17188 310 LLP-------------DGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPD---SKSPFFSSHHYKSC 371 (504)
Q Consensus 310 ~~~-------------~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~ 371 (504)
|+| +++.+++++.||.|++||+++... .....+..|...|.+++|+|+ +. ++++++.|+.
T Consensus 153 ~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~--~l~s~s~Dg~ 230 (753)
T 3jro_A 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YLASVSQDRT 230 (753)
T ss_dssp ECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEESSSC
T ss_pred ecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC--EEEEEecCCE
Confidence 999 589999999999999999987643 344566788999999999999 66 8999999999
Q ss_pred EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428 (504)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~ 428 (504)
|++||+................+...|.+++|+|+|++|++++.||.|++|++....
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 999999886544333444445678889999999999999999999999999998543
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.2e-33 Score=270.75 Aligned_cols=329 Identities=13% Similarity=0.132 Sum_probs=249.0
Q ss_pred cCCCcEEEEE---EcCCCcEEEEe--------------c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC
Q psy17188 111 SHGEVVCAVT---ISNPTKYVYTG--------------G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 172 (504)
Q Consensus 111 ~h~~~V~~v~---~s~~~~~l~~~--------------~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 172 (504)
.....+..++ |+|+++.+... . ++.+.||.++.... .............+.+++|+|++.
T Consensus 58 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~~~~ 135 (433)
T 3bws_A 58 DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI--THRFISRFKTGFQPKSVRFIDNTR 135 (433)
T ss_dssp ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC--SEEEEEEEECSSCBCCCEESSSSE
T ss_pred ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC--cceEEEEEcCCCCceEEEEeCCCe
Confidence 3456677777 77776655432 1 33335555543211 112222223345577999999888
Q ss_pred EEEEecCCCcEEEEeCCCCCcccee---eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKA---ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 249 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 249 (504)
++++++.++.|++||+.+++..... .+.+|...|.+++|+++++++++++.|+.|++||+++++.+..+..|...+.
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~ 215 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK 215 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee
Confidence 8888888999999999977643211 3457888999999999999999999999999999999999999998999999
Q ss_pred EEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------
Q psy17188 250 CIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------- 321 (504)
Q Consensus 250 ~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------- 321 (504)
+++|+|+++.++ +++.|+.|++||+++++. .........+.+++|+|+++++++++
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWISEDISVIDRKTKLE----------------IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEE----------------EEECCCCSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEEEcCCCCEEEEEecCCCcEEEEECCCCcE----------------EEEecCCCCceEEEEcCCCCEEEEEECCCCccc
Confidence 999999999875 555899999999998864 22223345689999999999999887
Q ss_pred -CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE
Q psy17188 322 -EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS 400 (504)
Q Consensus 322 -~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (504)
.|+.|++||+.+++.... ..+...+..++|+|+++. ++++++.++.+++||+...... ....+...+.+
T Consensus 280 ~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g~~-l~~~~~~~~~v~v~d~~~~~~~------~~~~~~~~~~~ 349 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNTENK-IYVSDMCCSKIEVYDLKEKKVQ------KSIPVFDKPNT 349 (433)
T ss_dssp SCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSSTTE-EEEEETTTTEEEEEETTTTEEE------EEEECSSSEEE
T ss_pred cCCCeEEEEECCCCcEEee---ccCCCCcceEEECCCCCE-EEEEecCCCEEEEEECCCCcEE------EEecCCCCCCe
Confidence 588999999987643222 233447889999999975 6677789999999999854321 12235677899
Q ss_pred EEEcCCCCEEEEeeC---------------CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC-CCcEE
Q psy17188 401 VKLLPDGRTLIVGGE---------------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIA 464 (504)
Q Consensus 401 ~~~s~~g~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~i~ 464 (504)
++|+|+|++|++++. ||.|++||+.+++....... ...+.+++|+|++++|++++. |+.|+
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence 999999999988876 57999999988765444332 346899999999999998875 99999
Q ss_pred EEEcCC
Q psy17188 465 VWDLHN 470 (504)
Q Consensus 465 iwd~~~ 470 (504)
+|+++.
T Consensus 427 v~~~~~ 432 (433)
T 3bws_A 427 VYRRDG 432 (433)
T ss_dssp EEEETT
T ss_pred EEEecC
Confidence 999864
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=275.73 Aligned_cols=294 Identities=13% Similarity=0.139 Sum_probs=224.7
Q ss_pred CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeee---------------------------------------
Q psy17188 114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLD--------------------------------------- 154 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~--------------------------------------- 154 (504)
.++.+++|+++|++|+++.++.|++||+.+++....+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 57889999999999988889999999998875111111111
Q ss_pred -------------ecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCC--CCCccceeeeecCcCceEEEEECCCCCEE
Q psy17188 155 -------------CLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVC 218 (504)
Q Consensus 155 -------------~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 218 (504)
..+|.+.|.+++|+|++++| ++++.|+.|++||+. +++.........|...|.+++|+|++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence 01344579999999999996 889999999999998 55543333333677889999999999999
Q ss_pred EEEeCCCcEEEEECCCCeEEE----eecCCCCCeEEEEEccC---CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188 219 FSCCSDGNIAVWDLHNQTLVR----QFQGHTDGASCIDISAD---GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT 291 (504)
Q Consensus 219 ~~~~~dg~i~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 291 (504)
++++.++.|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++..
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~----------- 233 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV----------- 233 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE-----------
T ss_pred EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee-----------
Confidence 999999999999998877554 77889999999999999 999999999999999999987632
Q ss_pred CcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec-----------------------cCCCc
Q psy17188 292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------------------SSAPA 348 (504)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-----------------------~~~~~ 348 (504)
......|...|.+++|+ ++++|++++.|+.|++||+++++........ .....
T Consensus 234 ---~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 234 ---DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp ---EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred ---eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 11134678899999999 9999999999999999999987644333321 23356
Q ss_pred eeeEEECCCCCCceeeecc-CCCeEEEEec--CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC------CCcE
Q psy17188 349 CYALAISPDSKSPFFSSHH-YKSCVKVWDI--SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNL 419 (504)
Q Consensus 349 i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~------dg~i 419 (504)
+..++++|+++ ++++++ .++.|++|++ ...........+. .+ ..+.+++|+|++.++++++. +..|
T Consensus 310 v~~i~~~~~~~--~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 310 VSKIIKSKNLP--FVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp EEEEEECSSSS--EEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSE
T ss_pred EEEEEEeCCCC--EEEEEECCCCeEEEEEeccCCCCceeeccEec--cC-CceEEEEecCCcEEEEEecccCCCCCCcce
Confidence 88999999988 566666 8999999999 3322222222222 23 78999999996544444443 4458
Q ss_pred EEeeCCCC
Q psy17188 420 SIWDLASP 427 (504)
Q Consensus 420 ~iwd~~~~ 427 (504)
.+|.+...
T Consensus 385 ~v~~~~~~ 392 (450)
T 2vdu_B 385 KFIEYNLN 392 (450)
T ss_dssp EEEEEETT
T ss_pred EEEEEEcC
Confidence 88876543
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-34 Score=272.35 Aligned_cols=260 Identities=16% Similarity=0.125 Sum_probs=177.1
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE-----EeecCCCCCeEEEEEcc--------CCCEEEEEcCCC
Q psy17188 201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-----RQFQGHTDGASCIDISA--------DGTKLWTGGLDN 267 (504)
Q Consensus 201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~~~h~~~v~~~~~~~--------~~~~l~s~~~dg 267 (504)
.|........+.+++.+|++++.|++|++||+++++.. ..+.+|.+.|.+++|+| |+++|++++.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 34444555666778889999999999999999988643 45789999999999998 788999999999
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSA 346 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 346 (504)
+|++||++++.. ......+...+.+++|+|++ ++|++++.|++|++||+++++...........
T Consensus 167 tv~~Wd~~~~~~---------------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 167 TLIIWRLTDEGP---------------ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEEEEEEETTEE---------------EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred eEEEEECCCCce---------------eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 999999987653 34455778899999999987 47999999999999999887533222111111
Q ss_pred CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCC
Q psy17188 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~ 425 (504)
.....+...+.. .. .......+...+.++.|+ +|++.|++++.|+.+++||+.
T Consensus 232 ~~~~~~s~~~~~------------~~--------------~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 232 KNPWLLTLNTLP------------LV--------------NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp SCCCSEEEESGG------------GC--------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred ccceEEeccccc------------ce--------------eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 111111111110 00 001112456667788886 799999999999999999997
Q ss_pred CCCcceeecccCCCCce------------------eEEEECC--CCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceE
Q psy17188 426 SPTPRIKAELTSSAPAC------------------YALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 485 (504)
Q Consensus 426 ~~~~~~~~~~~~~~~~v------------------~~l~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 485 (504)
.+...... ..+...+ ....++| ++.++++|+.||.|++||+.+++++..+..|..+|+
T Consensus 286 ~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~ 363 (393)
T 4gq1_A 286 ANNDYNEI--SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIV 363 (393)
T ss_dssp --------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEE
T ss_pred cCCCCceE--eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEE
Confidence 65432211 1111111 1223443 444677888999999999999999998899999999
Q ss_pred EEEEccCCCEEEEecCCC
Q psy17188 486 CIDISADGTKLWTGGLDN 503 (504)
Q Consensus 486 ~~~~s~d~~~l~s~s~Dg 503 (504)
+++|+|||++||++++||
T Consensus 364 svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 364 DFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp EEEECTTSSEEEEEESSE
T ss_pred EEEEcCCCCEEEEEeCCC
Confidence 999999999999999987
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=268.28 Aligned_cols=276 Identities=11% Similarity=0.102 Sum_probs=221.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEeecC-------------------------------------
Q psy17188 204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQG------------------------------------- 243 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~------------------------------------- 243 (504)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 457899999999966655 57899999999988 5555543
Q ss_pred -----------------CCCCeEEEEEccCCCEE-EEEcCCCeEEEEECC--CCceEEEeecCCCCCCCcccceecccCC
Q psy17188 244 -----------------HTDGASCIDISADGTKL-WTGGLDNTVRSWDLR--EGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 244 -----------------h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
|.+.|.+++|+|++++| ++++.||.|++||+. +++... .+....+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~-------------~~~~~~~~~ 150 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK-------------LRKRFCFSK 150 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE-------------EEEEEECSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee-------------eeecccCCC
Confidence 33379999999999996 899999999999998 665311 222235678
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCC---CCCceeeeccCCCeEEEEecC
Q psy17188 304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPD---SKSPFFSSHHYKSCVKVWDIS 378 (504)
Q Consensus 304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~i~i~d~~ 378 (504)
.|.+++|+|++++|++++.+|.+++|++.+.... ....+..|...+.+++|+|+ ++ ++++++.|+.|++||++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--FIITSDRDEHIKISHYP 228 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--EEEEEETTSCEEEEEES
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--EEEEEcCCCcEEEEECC
Confidence 8999999999999999999999999999876543 33356678889999999999 66 89999999999999998
Q ss_pred CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc----------------------
Q psy17188 379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---------------------- 436 (504)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------------- 436 (504)
....... ....|...|.+++|+ ++++|++++.|+.|++||+.+++........
T Consensus 229 ~~~~~~~----~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 229 QCFIVDK----WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp CTTCEEE----ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred CCceeee----eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 6532211 123578899999999 9999999999999999999988765544321
Q ss_pred -CCCCceeEEEECCCCCEEEEee-CCCcEEEEEc--CCc---ceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188 437 -SSAPACYALAISPDSKVCFSCC-SDGNIAVWDL--HNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 437 -~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~--~~~---~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 501 (504)
.....|..++|+|++++|++++ .|+.|+||++ .++ +.+..+..| ..|.+++|+|++.++++++.
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 2345689999999999999998 8999999999 665 677788887 88999999996544444443
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.2e-33 Score=265.27 Aligned_cols=263 Identities=15% Similarity=0.275 Sum_probs=215.5
Q ss_pred eeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCC--------CCccceeeeecCcCceEEEEECCCCC-EEE
Q psy17188 150 VSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLAS--------PTPRIKAELTSSAPACYALAISPDSK-VCF 219 (504)
Q Consensus 150 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 219 (504)
+.......|.+.|++++|+|+ +++|++++.||.|++|++.. +.......+.+|...|.+++|+|++. +|+
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 334455679999999999997 78999999999999999975 22445677889999999999999988 999
Q ss_pred EEeCCCcEEEEECCCCeE-------EEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188 220 SCCSDGNIAVWDLHNQTL-------VRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT 291 (504)
Q Consensus 220 ~~~~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 291 (504)
+++.||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||++++... .
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----------~ 268 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----------K 268 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS----------S
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC----------c
Confidence 999999999999987422 456778999999999999 6789999999999999999976310 0
Q ss_pred CcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC
Q psy17188 292 PVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS 370 (504)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 370 (504)
.......|...|.+++|+|+++ ++++++.||.|++||++... .....+..|...+.+++|+|+++. ++++++.|+
T Consensus 269 --~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~-~l~s~~~d~ 344 (430)
T 2xyi_A 269 --PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNET-ILASSGTDR 344 (430)
T ss_dssp --CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTT-EEEEEETTS
T ss_pred --ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCC-EEEEEeCCC
Confidence 0223346788899999999887 68899999999999998743 345566778889999999999875 788999999
Q ss_pred eEEEEecCCCCCCCc---------ccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCC
Q psy17188 371 CVKVWDISQPGSKTP---------VSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 371 ~i~i~d~~~~~~~~~---------~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~ 426 (504)
.|++||+........ ........|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 999999987432211 22233345778899999999999 899999999999999874
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=292.25 Aligned_cols=256 Identities=15% Similarity=0.201 Sum_probs=214.5
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC--CCEEEEecCCCcEEEEe
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWD 187 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iw~ 187 (504)
+|.+.|++++|+|++++|++++ ||.|+|||+..+. ........+|.+.|++++|+|+ +++|++|+.||.|++||
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 8999999999999999999998 9999999987421 1222334479999999999988 99999999999999999
Q ss_pred CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCC--eEEEeecCCCCCeEEEEEcc--------
Q psy17188 188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISA-------- 255 (504)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~-------- 255 (504)
+.+++......+..|...|.+++|+|+ ++++++++.||.|++||++++ .....+.+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 998765567778889999999999999 999999999999999999887 34455678999999999999
Q ss_pred -----CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC---CCEEEEEeCCCcEE
Q psy17188 256 -----DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGEASNLS 327 (504)
Q Consensus 256 -----~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~ 327 (504)
++.+|++++.||.|++||++++.... ........|...|.+++|+|+ +++|++++.||.|+
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEE-----------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccc-----------eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence 58899999999999999998764210 002334567889999999999 89999999999999
Q ss_pred EEeCCCCCcc---ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188 328 IWDLASPTPR---IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS 382 (504)
Q Consensus 328 v~d~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 382 (504)
+||+.+.... .......+...+.+++|+|+++ ++++++.|+.|++|++.....
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~--~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC--CEEEECSSSCEECCBCCSSSC
T ss_pred EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC--EEEEEcCCCEEEEEecCCCCC
Confidence 9999886432 2333445778999999999998 789999999999999986543
No 116
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.1e-33 Score=265.34 Aligned_cols=263 Identities=15% Similarity=0.222 Sum_probs=215.2
Q ss_pred eeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCC----------CeEEEeecCCCCCeEEEEEccCCC-EEEEEc
Q psy17188 197 AELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHN----------QTLVRQFQGHTDGASCIDISADGT-KLWTGG 264 (504)
Q Consensus 197 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 264 (504)
.....|...|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445678999999999997 67999999999999999986 577788889999999999999988 999999
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCC-ccceeee
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT-PRIKAEL 342 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~ 342 (504)
.||.|++||+..+....... ........|...|.+++|+| ++.+|++++.|+.|++||+++.. ......+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVI--------DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEE--------ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCCeEEEEeCCCCCCCCcee--------ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 99999999998743100000 00223346788899999999 77899999999999999999763 2344556
Q ss_pred ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEE
Q psy17188 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSI 421 (504)
Q Consensus 343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~i 421 (504)
..|...+.+++|+|+++. ++++++.|+.|++||++..... + .....|...|.+++|+|+++ +|++++.|+.|++
T Consensus 274 ~~~~~~v~~i~~~p~~~~-~l~tg~~dg~v~vwd~~~~~~~--~--~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEF-ILATGSADKTVALWDLRNLKLK--L--HSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp ECCSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCTTSC--S--EEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred ecCCCCeEEEEeCCCCCC-EEEEEeCCCeEEEEeCCCCCCC--e--EEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 688889999999999875 6889999999999999874321 1 22235788999999999985 7999999999999
Q ss_pred eeCCCCC------------cceeecccCCCCceeEEEECCCCC-EEEEeeCCCcEEEEEcCCcc
Q psy17188 422 WDLASPT------------PRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 422 wd~~~~~------------~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~ 472 (504)
||+.... ........+|...|++++|+|+++ +|++++.||.|+||++.+..
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 9998632 244556678888999999999999 99999999999999987643
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.2e-32 Score=259.97 Aligned_cols=348 Identities=14% Similarity=0.153 Sum_probs=250.8
Q ss_pred cCCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEE---EccCCCEEEE---------
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK---LLPDGRTLIV--------- 176 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~---~s~~~~~l~~--------- 176 (504)
.....|..+.+.|....++... ....+++... ....+..++ |+|+++.++.
T Consensus 25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~ 89 (433)
T 3bws_A 25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLEMD---------------KNIALVEMAIPVYKDEKEIELKLSSPGFQNS 89 (433)
T ss_dssp --CEEEEEEEEECCTTCEEEETTEECCEEEEEEE---------------TTEEEEEEEEECCCTTCCEEEEEECTTBCCE
T ss_pred cCCcEEEEEecccccCceEEcCceecceeeeecc---------------cCCccEEEEEeeccCCCcEEEEEEccccCcc
Confidence 4556778888888543333333 2223333221 223345555 5665554443
Q ss_pred -----ecCCC--cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----eecCC
Q psy17188 177 -----GGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-----QFQGH 244 (504)
Q Consensus 177 -----~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~h 244 (504)
++.++ .|..||..++.......+..+. .+.+++|+|++.++++++.++.|++||+.+++.+. .+.+|
T Consensus 90 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 168 (433)
T 3bws_A 90 SYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKK 168 (433)
T ss_dssp EEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTT
T ss_pred eeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccccc
Confidence 33344 4444444434333444444443 45689999977788888889999999999998887 45678
Q ss_pred CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCC
Q psy17188 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEA 323 (504)
Q Consensus 245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 323 (504)
...|.+++|+++++++++++.|+.|++||+++++.. .....+...+.+++|+|+++.++++ +.+
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK---------------ATVDLTGKWSKILLYDPIRDLVYCSNWIS 233 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE---------------EEEECSSSSEEEEEEETTTTEEEEEETTT
T ss_pred CCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE---------------EEEcCCCCCeeEEEEcCCCCEEEEEecCC
Confidence 999999999999999999999999999999987642 2223566789999999999988655 479
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--------CCCeEEEEecCCCCCCCcccccccccCC
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--------YKSCVKVWDISQPGSKTPVSQLDCLQRD 395 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (504)
+.|++||+++++. ...+.. ...+..++++|+++ .+++++ .|+.|++||+...... ....+.
T Consensus 234 ~~i~~~d~~~~~~--~~~~~~-~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~------~~~~~~ 302 (433)
T 3bws_A 234 EDISVIDRKTKLE--IRKTDK-IGLPRGLLLSKDGK--ELYIAQFSASNQESGGGRLGIYSMDKEKLI------DTIGPP 302 (433)
T ss_dssp TEEEEEETTTTEE--EEECCC-CSEEEEEEECTTSS--EEEEEEEESCTTCSCCEEEEEEETTTTEEE------EEEEEE
T ss_pred CcEEEEECCCCcE--EEEecC-CCCceEEEEcCCCC--EEEEEECCCCccccCCCeEEEEECCCCcEE------eeccCC
Confidence 9999999987643 333333 34689999999998 455544 4889999999864221 112344
Q ss_pred CceEEEEEcCCCCEE-EEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC---------------
Q psy17188 396 NYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--------------- 459 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~--------------- 459 (504)
..+..++|+|+++.+ ++++.++.|++||+.+++...... +...+.+++|+|++++|++++.
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 578899999999755 566889999999999765444332 4566889999999999988876
Q ss_pred CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC-CCC
Q psy17188 460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNT 504 (504)
Q Consensus 460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~-Dgt 504 (504)
||.|++||+.+++.+..+.. ...+.+++|+||+++|++++. |++
T Consensus 380 dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~ 424 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQ 424 (433)
T ss_dssp CCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTE
T ss_pred ceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCe
Confidence 57999999999999988875 457999999999999998875 663
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=9.5e-32 Score=253.84 Aligned_cols=332 Identities=16% Similarity=0.201 Sum_probs=237.5
Q ss_pred cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCCCCCccceeeeecCc
Q psy17188 126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSA 203 (504)
Q Consensus 126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 203 (504)
.++++++ |+.|++||+++++ .+..+ .+...+.+++|+|++++| ++++.|+.|++||+.+++. ...+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~---~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~--~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK---VTATI---PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--IATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE---EEEEE---ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--EEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCe---EEEEe---ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE--EEEEECCC
Confidence 4566666 9999999998752 22222 234568999999999987 6677899999999987654 33444443
Q ss_pred CceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEE
Q psy17188 204 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKV 281 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~ 281 (504)
.+.+++|+|++++|+++ +.++.|++||+.+++.+..+.. ...+.+++|+|+++.| ++++.|+.|++||+.+++..
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~- 151 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI- 151 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-
T ss_pred -CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-
Confidence 79999999999977654 4679999999999999888874 4578999999999977 78888999999999988742
Q ss_pred EeecCCCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS 360 (504)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 360 (504)
........+.+++|+|+++.+ ++++.++.|++||+++.+.. ..+ .+...+..++|+|+++.
T Consensus 152 ---------------~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~-~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 152 ---------------NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI--DTV-KVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp ---------------EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEE-ECSSEEEEEEECTTSSE
T ss_pred ---------------EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE--EEE-ecCCCccceEECCCCCE
Confidence 222334557899999999987 56678899999999886432 222 23457899999999984
Q ss_pred ceeeecc---CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE-EEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188 361 PFFSSHH---YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELT 436 (504)
Q Consensus 361 ~~~~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~ 436 (504)
+++++ .++.|++||+...... .. ......+.+++|+|++++| ++++.|+.|++||+.+++........
T Consensus 214 --l~~~~~~~~~~~v~~~d~~~~~~~---~~---~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 214 --AYVTNVDKYFNTVSMIDTGTNKIT---AR---IPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp --EEEEEECSSCCEEEEEETTTTEEE---EE---EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred --EEEEecCcCCCcEEEEECCCCeEE---EE---EecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 44444 6899999999765321 11 1223457899999999987 56678999999999987654433222
Q ss_pred CCC---------------CceeEEEECCC------C--CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188 437 SSA---------------PACYALAISPD------S--KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG 493 (504)
Q Consensus 437 ~~~---------------~~v~~l~~s~~------~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~ 493 (504)
... ..+........ . ..+...+.|...++|++.++... .+..+ ...|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~~--~~~~~~~g 359 (391)
T 1l0q_A 286 KNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQNP--THTYSETG 359 (391)
T ss_dssp SSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----CSSSC--EECCSSCE
T ss_pred cCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----CcCCC--eEEeCCCc
Confidence 110 01111111111 1 34556667889999999888642 12222 35688888
Q ss_pred CEEEEec
Q psy17188 494 TKLWTGG 500 (504)
Q Consensus 494 ~~l~s~s 500 (504)
.|.++..
T Consensus 360 ~y~~~~~ 366 (391)
T 1l0q_A 360 IYTVRLT 366 (391)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8876643
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5e-33 Score=258.07 Aligned_cols=282 Identities=10% Similarity=0.091 Sum_probs=211.1
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCC
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQ 235 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~ 235 (504)
.|...|.+++|+||+++|++|+.++ +++|++.+.+.. .. .+...+..+++.++++.+ ++++.|++|++||+.++
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI--MS--QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE--EE--EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee--ee--eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 7899999999999999999998765 789998764432 22 222247788888888877 56778899999999999
Q ss_pred eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188 236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314 (504)
Q Consensus 236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 314 (504)
+.+..+. +...|.+++++++. ++++ .|+.|++||+.++ +. +..... ....+++++
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~----------------~~~~~~--~~~~~~~s~-- 147 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR----------------ITDDIR--FGGVCEFSN-- 147 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB----------------SSCCEE--EEEEEEEET--
T ss_pred cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee----------------eEEecc--CCceEEEEc--
Confidence 9999988 77899999999764 4443 4789999999887 31 111111 344556666
Q ss_pred CEEEE--EeCCCcEEEEeCCCCCc-------------cc-eeeeccCCCceeeEEECCCCCCceeeeccCCCe-EEEEec
Q psy17188 315 RTLIV--GGEASNLSIWDLASPTP-------------RI-KAELTSSAPACYALAISPDSKSPFFSSHHYKSC-VKVWDI 377 (504)
Q Consensus 315 ~~l~~--~~~dg~i~v~d~~~~~~-------------~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-i~i~d~ 377 (504)
.++++ ++.+|.|++||+++... .. ...+..|...|.+++|+|+++ ++++++.|++ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~--~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD--MVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS--EEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC--EEEEEeCCCCEEEEEEC
Confidence 56666 58899999999987531 01 566788999999999999998 8999999998 999999
Q ss_pred CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc---------------------
Q psy17188 378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--------------------- 436 (504)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------- 436 (504)
+++.... .+....|...|.+++|+|++++|++++.|+.|++||++.........+.
T Consensus 226 ~~~~~~~---~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 3vu4_A 226 EDGVLVR---EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV 302 (355)
T ss_dssp TTCCEEE---EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC
T ss_pred CCCcEEE---EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc
Confidence 8753322 2211127889999999999999999999999999999765322211111
Q ss_pred CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
........++|++|+++|++++.||.+++|++..++
T Consensus 303 ~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 303 DKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred CCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 111223668999999999999999999999986543
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=257.52 Aligned_cols=278 Identities=13% Similarity=0.139 Sum_probs=208.3
Q ss_pred EcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188 121 ISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 199 (504)
Q Consensus 121 ~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 199 (504)
+.+++.+|++|+ ||.|++||+++++....+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~--------- 104 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-------TPNPRTGGEHPA---IISRGPCNRLLLLYPGN--------- 104 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-------EECCCTTCCCCS---EEEECSTTEEEEEETTT---------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-------cCCceeeeeCCc---eEEecCCCeEEEEEccC---------
Confidence 345677888887 8888888887754322222 345667777777 88888888888888653
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCC
Q psy17188 200 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISA--DGTKLWTGGLDNTVRSWDLRE 276 (504)
Q Consensus 200 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~ 276 (504)
.+.+||+.+++.+..+. +|...|.+++|+| ++++|++++.||+|++||+++
T Consensus 105 --------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~ 158 (343)
T 3lrv_A 105 --------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED 158 (343)
T ss_dssp --------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS
T ss_pred --------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC
Confidence 45678888887666654 6888999999999 999999999999999999998
Q ss_pred CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-CCCceeeEEEC
Q psy17188 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SAPACYALAIS 355 (504)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~~i~~~~~~ 355 (504)
++.. ......+...+.+++|+|++++|++|+.||.|++||+++++.. ...+.. |...|.+++|+
T Consensus 159 ~~~~--------------~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 159 DSQY--------------IVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp SCEE--------------EEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEEC
T ss_pred CcEE--------------EEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEe
Confidence 8752 1112234556999999999999999999999999999987543 134455 88899999999
Q ss_pred CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce--EEEEEcCCCCEEEEeeC-CCcEEEeeCCCCCccee
Q psy17188 356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI--RSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIK 432 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~~~~~~ 432 (504)
|++. ++++++ ++.|++||++.......+.... .+...+ .+++|+|+|++|++++. |+.|++|++........
T Consensus 224 ~~g~--~l~s~~-~~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 224 DNGY--WMVVEC-DQTVVCFDLRKDVGTLAYPTYT--IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp TTSS--EEEEEE-SSBEEEEETTSSTTCBSSCCCB--C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred CCCC--EEEEEe-CCeEEEEEcCCCCcceeecccc--cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 9998 788887 5599999998865443333221 122222 46999999999999988 99999999976544333
Q ss_pred ecccCCCCceeEEEECC---CCCEEEEeeCCCcEEEEEcC
Q psy17188 433 AELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~---~~~~l~s~~~dg~i~iwd~~ 469 (504)
. ..+..++|.+ +.+.+++++.||.++++-..
T Consensus 299 ~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 299 K------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp E------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred e------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 2 4567788988 88999999999999987543
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.1e-32 Score=253.87 Aligned_cols=287 Identities=9% Similarity=0.094 Sum_probs=202.5
Q ss_pred EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEE
Q psy17188 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTG 263 (504)
Q Consensus 185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~ 263 (504)
||++.+.+. ......|...|.+++|+||+++|++|+.++ +++||+.+++....... ..+..+++.++++.+ +++
T Consensus 3 i~s~~~~~~--~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNP--IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEEC
T ss_pred cccccccCC--ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEE
Confidence 344443332 345578999999999999999999998775 78999998877665442 257888898888777 567
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-Cccceeee
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-TPRIKAEL 342 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~ 342 (504)
+.|++|++||..+++. .....+...|.+++++++. ++++ .++.|++||+.+. +.......
T Consensus 78 ~~d~~v~iWd~~~~~~----------------~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQD----------------VSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp SSTTEEEEEETTTTEE----------------EEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE
T ss_pred CCccEEEEEECCCCcE----------------EEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc
Confidence 8889999999999874 2233456689999998864 4444 4789999999876 33222222
Q ss_pred ccCCCceeeEEECCCCCCceeee--ccCCCeEEEEecCCCCCCCc----------cc-ccccccCCCceEEEEEcCCCCE
Q psy17188 343 TSSAPACYALAISPDSKSPFFSS--HHYKSCVKVWDISQPGSKTP----------VS-QLDCLQRDNYIRSVKLLPDGRT 409 (504)
Q Consensus 343 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~i~i~d~~~~~~~~~----------~~-~~~~~~~~~~i~~~~~s~~g~~ 409 (504)
....+++++ . +++. ++.++.|++||+........ .. ......|...|.+++|+|+|++
T Consensus 139 -----~~~~~~~s~--~--~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 139 -----FGGVCEFSN--G--LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp -----EEEEEEEET--T--EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred -----CCceEEEEc--c--EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 334455666 3 3333 78999999999986531100 00 2334578899999999999999
Q ss_pred EEEeeCCCc-EEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE--EE---------
Q psy17188 410 LIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QF--------- 477 (504)
Q Consensus 410 l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~--------- 477 (504)
|++++.|++ |++||+++++.........|...|++++|+|++++|++++.|++|++||+.++.... .+
T Consensus 210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF 289 (355)
T ss_dssp EEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccc
Confidence 999999998 999999988765544323378899999999999999999999999999997653211 10
Q ss_pred -----------e-ecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 478 -----------Q-GHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 478 -----------~-~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
. .+......++|++|+++|++++.||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred ccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 0 11223467999999999999999984
No 122
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=9.9e-32 Score=284.02 Aligned_cols=399 Identities=10% Similarity=0.056 Sum_probs=286.7
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-C------CeEEEEeCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-K------GCVKVWDISQ 143 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d------~~i~vw~~~~ 143 (504)
.+.+...+||+ +.+++... +.++++.... .+.....+|...|.+++|||||++|++++ + ..|++|++.+
T Consensus 14 ~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~g-g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~ 89 (1045)
T 1k32_A 14 PNLLLNPDIHG--DRIIFVCC-DDLWEHDLKS-GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 89 (1045)
T ss_dssp CCCCEEEEEET--TEEEEEET-TEEEEEETTT-CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred cceEeCcEEeC--CEEEEEEC-CcEEEEECCC-CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence 34566777774 34444443 3555555433 23333348999999999999999999775 3 3799999877
Q ss_pred CCCCCceeeeeecCCCCce-------EEEEEccCCCEEEEecCC------CcEEEEeCCCCCccc---------------
Q psy17188 144 PGSKTPVSQLDCLQRDNYI-------RSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRI--------------- 195 (504)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~--------------- 195 (504)
+. .. ....|...+ .+++|+|||+++++++.+ ..|++|++.+++...
T Consensus 90 g~----~~--~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~ 163 (1045)
T 1k32_A 90 GE----IK--RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGR 163 (1045)
T ss_dssp TE----EE--ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTE
T ss_pred CC----eE--EcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCE
Confidence 52 22 223677777 899999999977777644 358888875543210
Q ss_pred --------------------------------eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeec
Q psy17188 196 --------------------------------KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQ 242 (504)
Q Consensus 196 --------------------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~ 242 (504)
...+.+|...+.++.|+++ .++++++.|+.+.+|.+.. +.....+.
T Consensus 164 l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~ 242 (1045)
T 1k32_A 164 RVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT 242 (1045)
T ss_dssp EEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred EEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec
Confidence 1123456777888999988 6777778889999998653 44445565
Q ss_pred CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCCEEEEEe
Q psy17188 243 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGG 321 (504)
Q Consensus 243 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 321 (504)
.|. .+...+|+|||+.|+++ .++.|++||+...++. .+...... .......+...+.+++|+ |+|++|++++
T Consensus 243 ~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~--~l~~~~~~---~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 243 SFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE--KIEIGDLE---SPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp CCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE--ECCCCCCC---BCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred CCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee--eeccCccc---ccccccccccccceeeecCCCCCEEEEEE
Confidence 555 46678999999988887 4899999999655443 21111100 011112345578999999 9999999887
Q ss_pred CCCcEEEEeCCCCCccceeeeccCCC-ceeeEEECCCCCCceeeeccCCCeEE-EEecCCCCCCCcccccccccCCCceE
Q psy17188 322 EASNLSIWDLASPTPRIKAELTSSAP-ACYALAISPDSKSPFFSSHHYKSCVK-VWDISQPGSKTPVSQLDCLQRDNYIR 399 (504)
Q Consensus 322 ~dg~i~v~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~~~~~~i~ 399 (504)
++.+.+|+...+.. ..+..+.. .+..++|+ +++ .++..+.+..+. +||+..... ..+. .+...+.
T Consensus 316 -~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~s-dg~--~l~~~s~~~~l~~~~d~~~~~~----~~l~--~~~~~~~ 382 (1045)
T 1k32_A 316 -RGQAFIQDVSGTYV---LKVPEPLRIRYVRRGGD-TKV--AFIHGTREGDFLGIYDYRTGKA----EKFE--ENLGNVF 382 (1045)
T ss_dssp -TTEEEEECTTSSBE---EECSCCSCEEEEEECSS-SEE--EEEEEETTEEEEEEEETTTCCE----EECC--CCCCSEE
T ss_pred -cCEEEEEcCCCCce---EEccCCCcceEEeeeEc-CCC--eEEEEECCCceEEEEECCCCCc----eEec--CCcccee
Confidence 78999999876532 23445555 78899999 887 455555577888 889875421 1121 4567889
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC----------cEEEEEcC
Q psy17188 400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG----------NIAVWDLH 469 (504)
Q Consensus 400 ~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg----------~i~iwd~~ 469 (504)
.++|+|||++|++++.++.|++||+.+++..... ..+...+..++|+|||++|++++.++ .|++||+.
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~--~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE--RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCCceEEec--cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999999999999999999999999987654433 35667788899999999999887654 89999999
Q ss_pred CcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 470 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 470 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
+++ +..+..|...+..++|+|||++|++++.++
T Consensus 461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp TTE-EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CCc-EEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 887 667778888899999999999999988754
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.9e-31 Score=250.56 Aligned_cols=279 Identities=15% Similarity=0.251 Sum_probs=220.8
Q ss_pred CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCCCCCeEE
Q psy17188 172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250 (504)
Q Consensus 172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 250 (504)
..+++++.|+.|++||+.+++. ...+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~--~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~ 78 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV--TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE--EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeE--EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence 4678888999999999987653 44455554 48999999999976 667789999999999999999888555 8999
Q ss_pred EEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEE
Q psy17188 251 IDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSI 328 (504)
Q Consensus 251 ~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v 328 (504)
++|+|++++|+ +++.|+.|++||+.+++.. ........+.+++|+|+++.+ ++++.++.|++
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~----------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVA----------------GTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEE----------------EEEECSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEE----------------EEEeCCCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 99999999775 5557799999999988742 222344568999999999987 67778999999
Q ss_pred EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188 329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 408 (504)
Q Consensus 329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 408 (504)
||+.+++.. ..+..+ ..+..++|+|+++. +++++..++.|++||++..... ....+...+.+++|+|+++
T Consensus 143 ~d~~~~~~~--~~~~~~-~~~~~~~~~~dg~~-l~~~~~~~~~v~~~d~~~~~~~------~~~~~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 143 INTVTKAVI--NTVSVG-RSPKGIAVTPDGTK-VYVANFDSMSISVIDTVTNSVI------DTVKVEAAPSGIAVNPEGT 212 (391)
T ss_dssp EETTTTEEE--EEEECC-SSEEEEEECTTSSE-EEEEETTTTEEEEEETTTTEEE------EEEECSSEEEEEEECTTSS
T ss_pred EECCCCcEE--EEEecC-CCcceEEECCCCCE-EEEEeCCCCEEEEEECCCCeEE------EEEecCCCccceEECCCCC
Confidence 999876433 333333 36789999999984 4467888999999999765321 2223456788999999999
Q ss_pred EEEEee---CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE-EEeeCCCcEEEEEcCCcceEEEEeecCCc
Q psy17188 409 TLIVGG---EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDG 483 (504)
Q Consensus 409 ~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~h~~~ 483 (504)
+|++++ .++.|++||+.+++...... .+. .+.+++|+|++++| ++++.|+.|++||+.+++++..+..|..+
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIP--VGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEE--CCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEe--cCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 999888 68999999999775544333 333 47889999999988 56688999999999999999988877654
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7e-33 Score=260.87 Aligned_cols=274 Identities=9% Similarity=0.026 Sum_probs=183.4
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc---eeeeecCcCceEEEEECC--------CCCEEEEEeCCCcEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI---KAELTSSAPACYALAISP--------DSKVCFSCCSDGNIA 228 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~ 228 (504)
.......+++++++|++++.|++|+|||.+.++... ...+.+|...|.+++|+| |+++|++++.|++|+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 334444555677889999999999999998765432 234678999999999997 788999999999999
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCC----------CCcccce
Q psy17188 229 VWDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK----------TPVSQLD 297 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~----------~~~~~~~ 297 (504)
|||+.++..+..+..|...|.+++|+|++ ++|++++.|++|++||+++++............ .......
T Consensus 170 ~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 170 IWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp EEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred EEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence 99999998888888899999999999987 489999999999999999876422111100000 0001122
Q ss_pred ecccCCceEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188 298 CLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376 (504)
Q Consensus 298 ~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d 376 (504)
...+...+.++.|+ ++++.|++++.|+.+++||+.... ....+..+...+..+.+.|+.+. ..
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~--~~~~l~~~~~~~~~~~~~~~~~~--~~------------ 313 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN--DYNEISDSTMKLGPKNLLPNVQG--IS------------ 313 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEE--EC------------
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC--CCceEeeecCccccEEEcccccc--cc------------
Confidence 23567788899987 799999999999999999998763 23334444445555555554321 10
Q ss_pred cCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE
Q psy17188 377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC 454 (504)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l 454 (504)
.........++| ++.++++|+.||.|++||+.+++.... ...|...|++++|+|||++|
T Consensus 314 -----------------~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~--~~~~~~~V~svafspdG~~L 374 (393)
T 4gq1_A 314 -----------------LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI--PIQLGMPIVDFCWHQDGSHL 374 (393)
T ss_dssp -----------------SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE--EEECSSCEEEEEECTTSSEE
T ss_pred -----------------ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE--ecCCCCcEEEEEEcCCCCEE
Confidence 011111233443 455677888999999999998765443 34566789999999999999
Q ss_pred EEeeCCCcEEEEEcC
Q psy17188 455 FSCCSDGNIAVWDLH 469 (504)
Q Consensus 455 ~s~~~dg~i~iwd~~ 469 (504)
|+++.+| +.+|++.
T Consensus 375 A~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 375 AIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEESSE-EEEEEEG
T ss_pred EEEeCCC-eEEEEEe
Confidence 9998877 6666653
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.1e-30 Score=254.47 Aligned_cols=334 Identities=12% Similarity=0.123 Sum_probs=247.2
Q ss_pred EEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC--CCCCccce
Q psy17188 120 TISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL--ASPTPRIK 196 (504)
Q Consensus 120 ~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~--~~~~~~~~ 196 (504)
+++|++++++++. |++|.+||..+++. +..+.. ++. +.+++|+||+++|++++.|+.|.+||+ .+.+ ..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~---~~~i~~-g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI---VKVIDT-GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--KV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE---EEEEEC-STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--EE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE---EEEEec-Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc--EE
Confidence 4889999888888 99999999987643 233221 232 889999999999999999999999999 5543 34
Q ss_pred eeeecCcCceEEEEECC----CCCEEEEEeC-CCcEEEEECCCCeEEEeecCC-----------CCCeEEEEEccCCC-E
Q psy17188 197 AELTSSAPACYALAISP----DSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGH-----------TDGASCIDISADGT-K 259 (504)
Q Consensus 197 ~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~~-~ 259 (504)
..+. +...+..++|+| |+++|++++. +++|.+||..+++++.++..+ ...+..+.++|++. +
T Consensus 216 ~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 216 AEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 4454 345579999999 9999998884 899999999999998887642 23788999999765 5
Q ss_pred EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccc
Q psy17188 260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRI 338 (504)
Q Consensus 260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~ 338 (504)
+++...++.|.+||+.+.+.. ......+...+..+.|+|+|+++++++ .+++|.+||..+++...
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l--------------~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNL--------------TVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSC--------------EEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEEECCCCeEEEEEecCCCcc--------------eeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 667788999999999876421 111223455678899999999877654 58899999999875433
Q ss_pred eeeecc--CCCceeeEEECCCCCCceeeecc-CCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188 339 KAELTS--SAPACYALAISPDSKSPFFSSHH-YKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411 (504)
Q Consensus 339 ~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 411 (504)
...... |......+ ++|++.. +++++. .+++|.+||...... .+.+..+ ..+...+..++++|++++|+
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~-~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l--~~~g~~~~~v~~~pdg~~l~ 436 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGP-VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL--QGQGGGSLFIKTHPKSSHLY 436 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEE-EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE--ECSCSCCCCEECCTTCCEEE
T ss_pred eeccCCCCCCCCCccc-CCCCCcc-EEEeccCCCceEEEEEeCCCCCchhcCeEEEEE--EcCCCCceEEEcCCCCCcEE
Confidence 332211 33222232 4677554 566654 689999999987322 1222222 23456677899999999999
Q ss_pred Eee-------CCCcEEEeeCCCCCcc-eeec------ccCCCCceeEEEECCCCCEEEEee-----CCCcEEEEEcCCcc
Q psy17188 412 VGG-------EASNLSIWDLASPTPR-IKAE------LTSSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQT 472 (504)
Q Consensus 412 ~~~-------~dg~i~iwd~~~~~~~-~~~~------~~~~~~~v~~l~~s~~~~~l~s~~-----~dg~i~iwd~~~~~ 472 (504)
+++ .+++|.+||+.+.+.. .... +..+...+..++|+|||+.|+++. .|+.|.|||.++++
T Consensus 437 v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 437 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp ECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred EecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 987 2679999999988765 2221 234567899999999999998763 47999999999999
Q ss_pred eEEEEeec
Q psy17188 473 LVRQFQGH 480 (504)
Q Consensus 473 ~~~~~~~h 480 (504)
++.+++.+
T Consensus 517 ~~~~i~~~ 524 (543)
T 1nir_A 517 LKAVVKDP 524 (543)
T ss_dssp EEEEECCT
T ss_pred EEEeecCC
Confidence 99998854
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-32 Score=249.98 Aligned_cols=274 Identities=14% Similarity=0.146 Sum_probs=203.7
Q ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCC
Q psy17188 210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGS 289 (504)
Q Consensus 210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~ 289 (504)
.+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+... ...+|+......
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~-~~~~~~~~~~~~ 116 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN-QITILDSKTNKV 116 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-EEEEEETTTCCE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-ceEEeecCCcce
Confidence 344578899999999999999999998888776 567888888887 99999999999999874 334444332210
Q ss_pred CCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188 290 KTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH 367 (504)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 367 (504)
+ ......+...|.+++|+| +++++++++.|+.|++||+++++.. ......+...+.+++|+|++. ++++++
T Consensus 117 ---~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~~i~~~~~~pdg~--~lasg~ 189 (343)
T 3lrv_A 117 ---L-REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY-IVHSAKSDVEYSSGVLHKDSL--LLALYS 189 (343)
T ss_dssp ---E-EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-EEECCCSSCCCCEEEECTTSC--EEEEEC
T ss_pred ---e-EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-EEEecCCCCceEEEEECCCCC--EEEEEc
Confidence 0 122234567899999999 9999999999999999999987542 222234555799999999998 899999
Q ss_pred CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCce--eE
Q psy17188 368 YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPAC--YA 444 (504)
Q Consensus 368 ~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v--~~ 444 (504)
.|+.|++||++...... ..+. ..|...|.+++|+|++.+|++++ ++.|++||+++.+...... +..+...+ .+
T Consensus 190 ~dg~i~iwd~~~~~~~~--~~~~-~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQAS--SRFP-VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp TTSCEEEEESSCTTSCC--EECC-CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred CCCEEEEEECCCCCCCc--cEEe-ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence 99999999998764331 1111 13788999999999999999999 4599999999876543222 12233333 36
Q ss_pred EEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEeecCCceEEEEEcc---CCCEEEEecCCCC
Q psy17188 445 LAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA---DGTKLWTGGLDNT 504 (504)
Q Consensus 445 l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~---d~~~l~s~s~Dgt 504 (504)
++|+|++++|++++. |+.|+||++.+....... .++..+.|.+ +.+.|++++.||+
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc
Confidence 899999999999998 999999999766543332 4566777777 7778888777763
No 127
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.98 E-value=9.3e-30 Score=268.99 Aligned_cols=345 Identities=12% Similarity=0.074 Sum_probs=256.5
Q ss_pred CCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC------CcEEE
Q psy17188 112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSI 185 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i 185 (504)
+.+.+...+||+ +.|+..+++.|.+|+++++. .. ....|...+.+++|||||++||+++.+ ..|++
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~----~~--~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~ 84 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCCDDLWEHDLKSGS----TR--KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYF 84 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEETTEEEEEETTTCC----EE--EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEE
T ss_pred ccceEeCcEEeC--CEEEEEECCcEEEEECCCCc----EE--EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEE
Confidence 456788999995 57887777899999997753 12 223688999999999999999988543 47999
Q ss_pred EeCCCCCccceeeeecCcCce-------EEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEE-------------
Q psy17188 186 WDLASPTPRIKAELTSSAPAC-------YALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVR------------- 239 (504)
Q Consensus 186 w~~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~------------- 239 (504)
|++.+++ ...+..|...+ ..++|+|||+++++++.+ ..|++|++.+++...
T Consensus 85 ~d~~~g~---~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp 161 (1045)
T 1k32_A 85 YNGENGE---IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD 161 (1045)
T ss_dssp EETTTTE---EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET
T ss_pred EECCCCC---eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC
Confidence 9998765 45567787777 899999999977777644 358888876665332
Q ss_pred ------------------------------------eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC--CceEE
Q psy17188 240 ------------------------------------QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE--GCVKV 281 (504)
Q Consensus 240 ------------------------------------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~--~~~~~ 281 (504)
.+.+|...+.++.|+++ .++++++.|+.+.+|.+.. +..
T Consensus 162 G~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~-- 238 (1045)
T 1k32_A 162 GRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL-- 238 (1045)
T ss_dssp TEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC--
T ss_pred CEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc--
Confidence 12345666777777776 5566667777777776542 221
Q ss_pred EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-----------CCCcee
Q psy17188 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-----------SAPACY 350 (504)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------~~~~i~ 350 (504)
........+...+|+|+|+.|+++ .++.|.+||+.... ...+.. +...+.
T Consensus 239 ---------------~~l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~ 299 (1045)
T 1k32_A 239 ---------------RKHTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKF 299 (1045)
T ss_dssp ---------------EECCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGG
T ss_pred ---------------eEecCCCCcceeeEcCCCCEEEEE-eCCEEEEecCCceE---eeeeccCcccccccccccccccc
Confidence 111112235677999999988887 48899999984322 112222 234689
Q ss_pred eEEEC-CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC-ceEEEEEcCCCCEEEEeeCCCcEE-EeeCCCC
Q psy17188 351 ALAIS-PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLIVGGEASNLS-IWDLASP 427 (504)
Q Consensus 351 ~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~~~~~dg~i~-iwd~~~~ 427 (504)
.++|+ |+++. ++.++ ++.+.+|+....... ....+.. .+..++|+ ||+.|++++.++.+. +|++.++
T Consensus 300 ~~~~S~pdG~~--la~~~-~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 300 AEDFSPLDGDL--IAFVS-RGQAFIQDVSGTYVL------KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp EEEEEECGGGC--EEEEE-TTEEEEECTTSSBEE------ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred eeeecCCCCCE--EEEEE-cCEEEEEcCCCCceE------EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 99999 99985 44443 789999998754211 1223445 78899999 999999998888888 9999876
Q ss_pred CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188 428 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD 502 (504)
Q Consensus 428 ~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D 502 (504)
+... +..+...+..++|+|||++|++++.++.|++||+.+++....+.+|...+.+++|+|||++|++++.+
T Consensus 370 ~~~~---l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 370 KAEK---FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CEEE---CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred CceE---ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 5332 22566789999999999999999999999999999999888887899999999999999999988764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=1.4e-30 Score=246.35 Aligned_cols=302 Identities=14% Similarity=0.097 Sum_probs=229.6
Q ss_pred CceEEEEEccCCC-EEEEec----CCC----cEEEEeC--CCCCccceeeeecCcCceEEEEECC--------------C
Q psy17188 160 NYIRSVKLLPDGR-TLIVGG----EAS----NLSIWDL--ASPTPRIKAELTSSAPACYALAISP--------------D 214 (504)
Q Consensus 160 ~~v~~~~~s~~~~-~l~~~~----~dg----~i~iw~~--~~~~~~~~~~~~~~~~~v~~~~~s~--------------~ 214 (504)
..+....|.+.+. ++++|+ .+| .|++||+ .+++......+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4567778888765 555765 467 8999999 8776544466788888777777664 1
Q ss_pred CCEEEEEeCC------CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeec
Q psy17188 215 SKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDIS 285 (504)
Q Consensus 215 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~ 285 (504)
+..++.++.+ +.|++||++. .....+..|...+.+++|+|||++|++++.|+ .|++||+.+++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~----- 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR----- 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-----
Confidence 5566666554 7999999974 44667777999999999999999999999885 9999999988742
Q ss_pred CCCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188 286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF 362 (504)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 362 (504)
....+...+.+++|+|+|+.|+ +++.++. |++||+.+++. ..+..+...+..++|+|+++.
T Consensus 217 -----------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~-- 280 (415)
T 2hqs_A 217 -----------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQN-- 280 (415)
T ss_dssp -----------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSE--
T ss_pred -----------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCE--
Confidence 2334556789999999999888 5555554 99999987643 455566778999999999984
Q ss_pred eeeccC-CC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCcceeeccc
Q psy17188 363 FSSHHY-KS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELT 436 (504)
Q Consensus 363 ~~~~~~-~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~ 436 (504)
++.++. ++ .|.+||+...... ....+...+..++|+|||++|++++.+ ..|++||+.+++... +.
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~---l~ 351 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGGAPQ------RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV---LS 351 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSSCCE------ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE---CC
T ss_pred EEEEECCCCCcEEEEEECCCCCEE------EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE---ec
Confidence 444333 44 6777787764321 112345678899999999999988764 579999999876532 23
Q ss_pred CCCCceeEEEECCCCCEEEEeeCCC---cEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188 437 SSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTDGASCIDISADGT 494 (504)
Q Consensus 437 ~~~~~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~ 494 (504)
.+. .+..++|+|||++|++++.++ .|++||+. ++....+..|.+.|.+++|+|...
T Consensus 352 ~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 352 STF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 333 788999999999999988877 79999987 556778889999999999999654
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.8e-29 Score=221.56 Aligned_cols=297 Identities=12% Similarity=0.041 Sum_probs=184.3
Q ss_pred EEEEEEcCCCc---EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-C---CcEEEEeC
Q psy17188 116 VCAVTISNPTK---YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A---SNLSIWDL 188 (504)
Q Consensus 116 V~~v~~s~~~~---~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d---g~i~iw~~ 188 (504)
++++-|-..+- .+++++...|++|+...+..-..+.. ...|+.+|..+.+.||..-|++..- + +.|+..-+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYT--WHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEE--EECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEE--EeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 45555554332 67778899999999987522233333 3468888999999986543333211 1 11211111
Q ss_pred CCC--CccceeeeecCcCceEEEEECCCCCEEEEEe--CCCcEEEEEC-CCCeEEEeecCCCCCeEEEEEcc---CCCEE
Q psy17188 189 ASP--TPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDL-HNQTLVRQFQGHTDGASCIDISA---DGTKL 260 (504)
Q Consensus 189 ~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~h~~~v~~~~~~~---~~~~l 260 (504)
... .......-.+|...|..+ ++++++.+++ .|+.|++|++ .+++.+..+.+|...++.++|++ ++.+|
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred CCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 111 111122223444445443 5666666543 5999999999 55888888889999999999999 77999
Q ss_pred EEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
++++.|++|++||+++++... .+.. ..+...+.+++|+|+|.++++++.+.. +|
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~-------------tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w---------- 251 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLK-------------KMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE---------- 251 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEE-------------EEECCC---CCCEEEEEEETTEEEEEEC------------------
T ss_pred EEecCCCcEEEEECCCCcEEE-------------EEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc----------
Confidence 999999999999999997421 1110 012245778899999998877664322 12
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
.+++++.|+++++||..++.............|...+.+..++ +.++++++.|++|
T Consensus 252 ----------------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTI 307 (356)
T 2w18_A 252 ----------------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTI 307 (356)
T ss_dssp ----------------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCE
T ss_pred ----------------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcE
Confidence 2556666777777776654221110000011233333333333 7789999999999
Q ss_pred EEeeCCCCCcceeecccCCCCcee-EEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 420 SIWDLASPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
+|||+.+++.+. .+.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 308 kIWDl~tGk~l~--tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 308 AIWDLLLGQCTA--LLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEETTTCSEEE--EECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCcEEE--EecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999886544 4556655544 5899999999999999999999995
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=2.4e-29 Score=257.46 Aligned_cols=331 Identities=14% Similarity=0.111 Sum_probs=232.6
Q ss_pred CCceEEEEEccCCCEEEEecC-CC-----cEEEEeCCCCCccceeeeecCc----------------------CceEEEE
Q psy17188 159 DNYIRSVKLLPDGRTLIVGGE-AS-----NLSIWDLASPTPRIKAELTSSA----------------------PACYALA 210 (504)
Q Consensus 159 ~~~v~~~~~s~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~----------------------~~v~~~~ 210 (504)
...+.+++|+|||++|++++. |+ .|++||+.+++.........+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999988 88 8999999987643332222222 2378899
Q ss_pred ECCCCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188 211 ISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG 288 (504)
Q Consensus 211 ~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~ 288 (504)
|+|||++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~-- 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG-- 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC--
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC--
Confidence 9999999999886 899999999873 4456677888999999999999999887 569999999988753211100
Q ss_pred CCCCcc---cceecccCCceEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEeCC
Q psy17188 289 SKTPVS---QLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---------------------------------NLSIWDLA 332 (504)
Q Consensus 289 ~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~v~d~~ 332 (504)
...... ..........+..++|+|||++|++++.|+ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 000000 000000012257899999999999987665 78899998
Q ss_pred C-CCccceeeeccCCCceeeEEECCCCCCceeeec---cCCCeEEEEecCCCCCCCcccccccccCCC---ceEEEEEcC
Q psy17188 333 S-PTPRIKAELTSSAPACYALAISPDSKSPFFSSH---HYKSCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLP 405 (504)
Q Consensus 333 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~---~i~~~~~s~ 405 (504)
+ ++.........+...+..++| ||++.+++... ..+..|.+||+.++........ .... .+..++|+|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE----TSPTWVPLHNSLRFLD 346 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE----ECSSCCCCCSCCEECT
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc----CCCCcCCcCCceEECC
Confidence 7 653322222246678899999 99995333332 2467899999887543221111 1111 345889999
Q ss_pred CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEE-EECCCCCEEEE-eeCCC--cEEEEEcCC-cceEEEEeec
Q psy17188 406 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL-AISPDSKVCFS-CCSDG--NIAVWDLHN-QTLVRQFQGH 480 (504)
Q Consensus 406 ~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~s-~~~dg--~i~iwd~~~-~~~~~~~~~h 480 (504)
||+++++++.+|.++||.++.... ...+..+...+..+ .|+||++.|+. ++.++ .++||++.. ++....+..
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~- 423 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK- 423 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-
T ss_pred CCeEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-
Confidence 999999999999888887653222 34455566677777 59999998764 44555 899999864 555666665
Q ss_pred CCceEEEEEccCCCEEEEecC
Q psy17188 481 TDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 481 ~~~v~~~~~s~d~~~l~s~s~ 501 (504)
...+..++|+|||++|+....
T Consensus 424 ~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 424 APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp SCSEEEEEECTTSSEEEEEEE
T ss_pred CCCceEEEECCCCCEEEEEec
Confidence 667899999999999887643
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=6.5e-29 Score=219.19 Aligned_cols=281 Identities=11% Similarity=0.061 Sum_probs=191.3
Q ss_pred eEEEEEccCCC---EEEEecCCCcEEEEeCCCC-CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188 162 IRSVKLLPDGR---TLIVGGEASNLSIWDLASP-TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 237 (504)
Q Consensus 162 v~~~~~s~~~~---~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 237 (504)
+.++.|-..+- .+++++ ...|++|+..+. +.+....+..|+.+|..+.+.||..-|++..-
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------- 106 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL-------------- 106 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--------------
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee--------------
Confidence 44555544332 566666 478999999875 23567888999999999999998654443221
Q ss_pred EEeecCCCCCeEEEEEccC----CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188 238 VRQFQGHTDGASCIDISAD----GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 313 (504)
Q Consensus 238 ~~~~~~h~~~v~~~~~~~~----~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 313 (504)
=+-+...|..++++|| +..+++++.+ +.+|++.+++
T Consensus 107 ---~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~----------------------------------- 146 (356)
T 2w18_A 107 ---GNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRR----------------------------------- 146 (356)
T ss_dssp ---CSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTE-----------------------------------
T ss_pred ---ccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCc-----------------------------------
Confidence 1125567899999999 8899998744 7777765443
Q ss_pred CCEEEEEe--CCCcEEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188 314 GRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD 390 (504)
Q Consensus 314 ~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 390 (504)
.+.++. .|+.|++|++... .........|...+..++|++ ++...++++++.|++|++||+++++....+..
T Consensus 147 --lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g-- 221 (356)
T 2w18_A 147 --LVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI-- 221 (356)
T ss_dssp --EEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred --EEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC--
Confidence 233322 4666666666331 133344556677888889988 44444999999999999999988654333321
Q ss_pred cccCCCceEEEEEcCCCCEE------------EEeeCCCcEEEeeCCCCCcceeec---ccCCCCceeEEEECCCCCEEE
Q psy17188 391 CLQRDNYIRSVKLLPDGRTL------------IVGGEASNLSIWDLASPTPRIKAE---LTSSAPACYALAISPDSKVCF 455 (504)
Q Consensus 391 ~~~~~~~i~~~~~s~~g~~l------------~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~l~~s~~~~~l~ 455 (504)
...+...+.+++|+|+|+++ ++|+.|++|++||..+++...... ..+|...+.+..+ ++.+++
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lA 299 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAA 299 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEE
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEE
Confidence 11123467788999999887 567789999999999876543332 1344444433333 478999
Q ss_pred EeeCCCcEEEEEcCCcceEEEEeecCCceE-EEEEccCCCEEEEecCCCC
Q psy17188 456 SCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 456 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~s~d~~~l~s~s~Dgt 504 (504)
+++.|++|+|||+.+++++.++.+|...+. .++|+|||++|++|+.|+|
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 999999999999999999999999988665 5899999999999999997
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.8e-28 Score=237.53 Aligned_cols=323 Identities=13% Similarity=0.098 Sum_probs=235.4
Q ss_pred EEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEeecC
Q psy17188 166 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HNQTLVRQFQG 243 (504)
Q Consensus 166 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~ 243 (504)
.|+|++.++++++.|++|.+||..+++. ...+..+.. +..++|+||+++|++++.|+.|.+||+ .+++.+.++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~--~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI--VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE--EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE--EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence 3789999999999999999999987764 444442322 889999999999999999999999999 8899998888
Q ss_pred CCCCeEEEEEcc----CCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-E
Q psy17188 244 HTDGASCIDISA----DGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-L 317 (504)
Q Consensus 244 h~~~v~~~~~~~----~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l 317 (504)
+...+..++|+| ||++|++++. +++|.+||..++++... +...+.. . ..........+..+.++|++.. +
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~-i~~~g~~--~-~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI-VSTRGMT--V-DTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE-EECCEEC--S-SSCCEESCCCEEEEEECSSSSEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccccee-ecccCcc--c-CccccccCCceEEEEECCCCCEEE
Confidence 556789999999 9999998885 89999999998874321 1000000 0 0000012336889999997765 4
Q ss_pred EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188 318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397 (504)
Q Consensus 318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (504)
++...++.|.+||..+.+......+. +...+..+.|+|+++. +++++..++.|.+||..+++....+.. ....|...
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~-l~va~~~~~~v~v~D~~tg~l~~~i~~-g~~ph~g~ 372 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRY-FMTAANNSNKVAVIDSKDRRLSALVDV-GKTPHPGR 372 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCE-EEEEEGGGTEEEEEETTTTEEEEEEEC-SSSBCCTT
T ss_pred EEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCE-EEEEecCCCeEEEEECCCCeEEEeecc-CCCCCCCC
Confidence 55677899999999876543322333 4557889999999985 455666789999999987643222211 11224333
Q ss_pred eEEEEEcCC-CCEEEEee-CCCcEEEeeCCCCC-----cceeecccCCCCceeEEEECCCCCEEEEee-------CCCcE
Q psy17188 398 IRSVKLLPD-GRTLIVGG-EASNLSIWDLASPT-----PRIKAELTSSAPACYALAISPDSKVCFSCC-------SDGNI 463 (504)
Q Consensus 398 i~~~~~s~~-g~~l~~~~-~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-------~dg~i 463 (504)
...+ ++|+ +..++++. .|++|.+||+.+.. ...+..+..+...+..++++||+++|++++ .+++|
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV 451 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence 3333 4677 66666664 57999999998721 234455556666677889999999999987 26799
Q ss_pred EEEEcCCcceE-EEE--------eecCCceEEEEEccCCCEEEEec
Q psy17188 464 AVWDLHNQTLV-RQF--------QGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 464 ~iwd~~~~~~~-~~~--------~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
.+||+.+++.. ..+ ..+...+..++|+|||+.|+++.
T Consensus 452 ~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 452 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp EEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred EEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence 99999999877 443 34567899999999999999763
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=2.5e-28 Score=249.90 Aligned_cols=330 Identities=16% Similarity=0.144 Sum_probs=235.2
Q ss_pred CCcEEEEEEcCCCcEEEEec--CC-----eEEEEeCCCCCCCCceeeeeecCCC----------------------CceE
Q psy17188 113 GEVVCAVTISNPTKYVYTGG--KG-----CVKVWDISQPGSKTPVSQLDCLQRD----------------------NYIR 163 (504)
Q Consensus 113 ~~~V~~v~~s~~~~~l~~~~--d~-----~i~vw~~~~~~~~~~~~~~~~~~~~----------------------~~v~ 163 (504)
...|.+++|||||++|++++ |+ .|++||+++++.. .......+. ..|.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR---LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE---EEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee---EccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 45689999999999998776 67 8999999876422 122111122 3478
Q ss_pred EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188 164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 243 (504)
Q Consensus 164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 243 (504)
+++|+|||++|++++. +.|++||+.+++......+..+...+..++|+|||++|++++ ++.|++||+.+++.......
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 9999999999999886 999999998762001344666777899999999999999887 46899999999887766554
Q ss_pred CCCC----------------eEEEEEccCCCEEEEEcCCC---------------------------------eEEEEEC
Q psy17188 244 HTDG----------------ASCIDISADGTKLWTGGLDN---------------------------------TVRSWDL 274 (504)
Q Consensus 244 h~~~----------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~~wd~ 274 (504)
+... +.+++|+|||++|++++.|+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 4432 47899999999999988765 7888888
Q ss_pred CC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCccceeeeccCC--
Q psy17188 275 RE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLASPTPRIKAELTSSA-- 346 (504)
Q Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~~~~~~~~~~~~~-- 346 (504)
.+ ++..... ....+...+..++| |||++|+++.. +..|++||+.+++...........
T Consensus 271 ~~~~~~~~~~-------------~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 271 AEQAQTQWID-------------LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV 336 (741)
T ss_dssp STTCCCEEEC-------------CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred CCCCceEEec-------------CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence 87 6642110 00135677899999 99999997753 567999999887544333222111
Q ss_pred CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE-EEcCCCCEEEE-eeCCC--cEEEe
Q psy17188 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV-KLLPDGRTLIV-GGEAS--NLSIW 422 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~~-~~~dg--~i~iw 422 (504)
..+..++|+||++ +++++..++.+++|.++.... .. ....+...+..+ .|+|+|+.|+. ++.++ .+++|
T Consensus 337 ~~~~~~~~spdg~--~~~~~~~~g~~~l~~~~~~~~---~~--~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 337 PLHNSLRFLDDGS--ILWSSERTGFQHLYRIDSKGK---AA--ALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp CCCSCCEECTTSC--EEEEECTTSSCEEEEECSSSC---EE--ESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred CcCCceEECCCCe--EEEEecCCCccEEEEEcCCCC---ee--eeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 1456899999998 777778888888887763322 11 122345667777 59999997765 44455 89999
Q ss_pred eCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCC----CcEEEEEcCCc
Q psy17188 423 DLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQ 471 (504)
Q Consensus 423 d~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~ 471 (504)
++.. +..... +.. ...+..++|+||+++|+....+ ..+++|+...+
T Consensus 410 ~~~~~g~~~~~--l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 410 AVPLQGGQPQR--LSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEETTCCCCEE--CCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EEEcCCCCeee--ccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 8864 322222 222 4457889999999998866543 46888887543
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=7.3e-29 Score=253.24 Aligned_cols=339 Identities=14% Similarity=0.131 Sum_probs=226.1
Q ss_pred cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCC---ceEEEEEccCCCEEEEecCC---------Cc
Q psy17188 115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLPDGRTLIVGGEA---------SN 182 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~d---------g~ 182 (504)
.+.+++|+|||++++++.|++|++||+.+++... .+. .|.. .|.+++|||||++|++++.+ +.
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~---~~~--~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTV---LIE--GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEE---EEC--TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEE---Eec--cccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 4577899999998887569999999998864322 111 3333 49999999999999998764 77
Q ss_pred EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe--------------
Q psy17188 183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-------------- 248 (504)
Q Consensus 183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-------------- 248 (504)
|++||+.+++.........|...+..++|+|||+.|++++. +.|++||+.+++.......+...+
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 88999998765333333345555888999999999999876 799999999988776666544433
Q ss_pred ----EEEEEccCCCEEEEEcCCC----------------------------------eEEEEECCCCce-EEEeecCCCC
Q psy17188 249 ----SCIDISADGTKLWTGGLDN----------------------------------TVRSWDLREGCV-KVWDISQPGS 289 (504)
Q Consensus 249 ----~~~~~~~~~~~l~s~~~dg----------------------------------~i~~wd~~~~~~-~~~~~~~~~~ 289 (504)
.+++|+|||+.|++++.|+ .|++||+.+++. .... .
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~--~--- 246 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM--P--- 246 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC--C---
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee--C---
Confidence 7899999999999887553 677777766652 1100 0
Q ss_pred CCCcccceecccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCccceeeeccCCCce----eeEEECCCCCCc
Q psy17188 290 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPAC----YALAISPDSKSP 361 (504)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~ 361 (504)
......+...+..++|+|||+++++... +..|++||+.+++....... .+...+ ..++|+||++.+
T Consensus 247 -----~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 247 -----PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp -----CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECTTSCSE
T ss_pred -----CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcCCCCeE
Confidence 0001123567899999999998877643 35799999988754333222 122222 378999999975
Q ss_pred eeeeccCCC------eEEEEecCCCCC---CCcccccccccCCCceEE-EEEcCCCCEEEEeeCC---CcEEEeeCCCCC
Q psy17188 362 FFSSHHYKS------CVKVWDISQPGS---KTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEA---SNLSIWDLASPT 428 (504)
Q Consensus 362 ~~~~~~~~~------~i~i~d~~~~~~---~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~d---g~i~iwd~~~~~ 428 (504)
++++...++ .|.+||...... ...+. .....+.. ++|+|||+.|+..+.+ +.+++|++....
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-----~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-----SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-----CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred EEEEecccCCCcceeEEEEEeccCCCCccceeEee-----cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 555466666 466666322222 22111 12233444 6999999999866555 789999986533
Q ss_pred cceeecccC---CCCceeEEEECCCCCEEEEeeCC-C--cEEEEEcCCcceEE
Q psy17188 429 PRIKAELTS---SAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVR 475 (504)
Q Consensus 429 ~~~~~~~~~---~~~~v~~l~~s~~~~~l~s~~~d-g--~i~iwd~~~~~~~~ 475 (504)
......+.. +...+..++|+||+++|+..... . ...+++..+++.+.
T Consensus 396 ~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~~~ 448 (723)
T 1xfd_A 396 NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMF 448 (723)
T ss_dssp TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEE
T ss_pred CCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCEEE
Confidence 211122222 45567889999999988865432 2 23445555554433
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.1e-27 Score=226.58 Aligned_cols=301 Identities=16% Similarity=0.146 Sum_probs=224.2
Q ss_pred CcEEEEEEcCCC-cEEEEec-----CC----eEEEEeC--CCCCCCCceeeeeecCCCCceEEEEEcc------------
Q psy17188 114 EVVCAVTISNPT-KYVYTGG-----KG----CVKVWDI--SQPGSKTPVSQLDCLQRDNYIRSVKLLP------------ 169 (504)
Q Consensus 114 ~~V~~v~~s~~~-~~l~~~~-----d~----~i~vw~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~------------ 169 (504)
..+...+|++.+ +++++|+ || .|+|||+ .+++ .+......+|...+..+++++
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT---VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC---EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC---EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 456667777766 4565654 57 8999999 7653 332333446777777777765
Q ss_pred --CCCEEEEecCC------CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEE
Q psy17188 170 --DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLV 238 (504)
Q Consensus 170 --~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~ 238 (504)
.+..++.++.+ +.|++||++... ...+..|...+.+++|+|||++|++++.++ .|++||+.+++..
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR 216 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCC---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE
Confidence 25667666544 799999997543 456677888999999999999999999875 8999999998875
Q ss_pred EeecCCCCCeEEEEEccCCCEEE-EEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188 239 RQFQGHTDGASCIDISADGTKLW-TGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 315 (504)
Q Consensus 239 ~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 315 (504)
.+..|...+.+++|+|||+.|+ +++.|+ .|++||+.+++.. ....+...+.+++|+|+|+
T Consensus 217 -~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~----------------~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 217 -QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR----------------QVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp -EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------ECCCCSSCEEEEEECTTSS
T ss_pred -EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE----------------eCcCCCCcccceEECCCCC
Confidence 4666888999999999999887 666665 4999999988642 2334556789999999999
Q ss_pred EEEEEeC-CC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC---CCeEEEEecCCCCCCCccccc
Q psy17188 316 TLIVGGE-AS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY---KSCVKVWDISQPGSKTPVSQL 389 (504)
Q Consensus 316 ~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~ 389 (504)
+|++++. ++ .|.+||+.+++. ..+..+...+..++|+|+++. ++.++. +..|.+||+...... .+
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdG~~--l~~~~~~~g~~~i~~~d~~~~~~~----~l 350 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQDADVSSDGKF--MVMVSSNGGQQHIAKQDLATGGVQ----VL 350 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEEEEECTTSSE--EEEEEECSSCEEEEEEETTTCCEE----EC
T ss_pred EEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccCeEECCCCCE--EEEEECcCCceEEEEEECCCCCEE----Ee
Confidence 9988876 44 677788877642 233445567889999999994 444443 368999999865321 11
Q ss_pred ccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188 390 DCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 452 (504)
Q Consensus 390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~ 452 (504)
..+ ..+.+++|+|||++|++++.++ .|++||+.... ...+..+...|.+++|+|...
T Consensus 351 --~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 351 --SST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp --CCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC---EEECCCSSSEEEEEEECCCCC
T ss_pred --cCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc---EEEeeCCCCCCcCCccccccc
Confidence 122 2788999999999999988777 79999987543 344567788899999999654
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=3.2e-27 Score=240.32 Aligned_cols=324 Identities=13% Similarity=0.111 Sum_probs=220.2
Q ss_pred EEEEEcCCCcEEEEecCCeEEEEeCCCCCCC-Cceeeeeec------------CCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188 117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSK-TPVSQLDCL------------QRDNYIRSVKLLPDGRTLIVGGEASNL 183 (504)
Q Consensus 117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~-~~~~~~~~~------------~~~~~v~~~~~s~~~~~l~~~~~dg~i 183 (504)
..+.|+ +++++....|+ | +||+.+++.. ..+...... .+...|.+++|+|| +.++.+. ++.|
T Consensus 29 ~~~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i 103 (706)
T 2z3z_A 29 VGLQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGL 103 (706)
T ss_dssp TTCEEE-TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEE
T ss_pred CCCcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEE
Confidence 335666 45555555566 8 9999987542 222211100 01156999999999 6666664 5999
Q ss_pred EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeEEEeecCCCCC-----------
Q psy17188 184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDG----------- 247 (504)
Q Consensus 184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~h~~~----------- 247 (504)
++||+.+++. ..+..+...+.+++|+|||+.|+++ .++.|++||+.+ ++.......+...
T Consensus 104 ~~~d~~~~~~---~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 104 VGFDMLARKV---TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEETTTTEE---EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred EEEECCCCce---EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 9999987643 3445566678889999999999985 679999999998 8776655544443
Q ss_pred ---eEEEEEccCCCEEEEEc---------------------------------CCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188 248 ---ASCIDISADGTKLWTGG---------------------------------LDNTVRSWDLREGCVKVWDISQPGSKT 291 (504)
Q Consensus 248 ---v~~~~~~~~~~~l~s~~---------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~ 291 (504)
+.++.|+|||++|++++ .+..|++||+.+++...
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~---------- 249 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY---------- 249 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE----------
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe----------
Confidence 48899999999999987 44689999999887432
Q ss_pred CcccceecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCC---CceeeEEECC--CCCCc
Q psy17188 292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSA---PACYALAISP--DSKSP 361 (504)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~---~~i~~~~~~~--~~~~~ 361 (504)
......+...+.+++|+|||+.|++++.++ .|.+||+.+++.........+. ..+..++|+| +++
T Consensus 250 ---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-- 324 (706)
T 2z3z_A 250 ---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-- 324 (706)
T ss_dssp ---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE--
T ss_pred ---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE--
Confidence 111123556789999999999999887665 8999999887322221111222 1246789999 887
Q ss_pred eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE-EEEcCCCCEEEEeeCC-C----cEEEeeCCCCCcceeecc
Q psy17188 362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEA-S----NLSIWDLASPTPRIKAEL 435 (504)
Q Consensus 362 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~ 435 (504)
+++++..++.+++|+++.... ....+ ..+...+.. ++|+|+|+.|+.++.+ + .|+.||+.+++....
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~--~~~~l--~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l--- 397 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGR--LIRQV--TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL--- 397 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSC--EEEEC--CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES---
T ss_pred EEEEEccCCccEEEEEECCCC--EEEec--CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec---
Confidence 777888889999998863211 11111 234555666 7999999988765544 3 577777776543222
Q ss_pred cCCCCceeEEEECCCCCEEEEeeCC----CcEEEEEcCCcc
Q psy17188 436 TSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQT 472 (504)
Q Consensus 436 ~~~~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~~ 472 (504)
. +...+..++|+||+++|+..+.+ +.|++||+.+++
T Consensus 398 ~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 398 T-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp C-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred c-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 1 45568899999999998876543 569999998887
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=6.9e-27 Score=216.30 Aligned_cols=306 Identities=15% Similarity=0.276 Sum_probs=207.2
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-CcEEEEECC--CCe--EEEeecCCCCC
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVWDLH--NQT--LVRQFQGHTDG 247 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iwd~~--~~~--~~~~~~~h~~~ 247 (504)
.+++++.++.|++|++.............+...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 3444478999999999642211122334566778899999999988888876 899999998 544 444555444 7
Q ss_pred eEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCc
Q psy17188 248 ASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASN 325 (504)
Q Consensus 248 v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~ 325 (504)
+..++|+|++++|++++ .++.|.+||+..+.... ..........+.+++|+|+++++++++ .++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~-------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 152 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG-------------VVDVVEGLDGCHSANISPDNRTLWVPALKQDR 152 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE-------------EEEEECCCTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc-------------ccccccCCCCceEEEECCCCCEEEEecCCCCE
Confidence 89999999999876665 48899999995332110 112223334588899999999888887 8899
Q ss_pred EEEEeCCC-CCcccee--eecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-CCcccccccc----cCCC
Q psy17188 326 LSIWDLAS-PTPRIKA--ELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCL----QRDN 396 (504)
Q Consensus 326 i~v~d~~~-~~~~~~~--~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~----~~~~ 396 (504)
|.+||+.+ ++..... .... ....+..++|+|+++. ++++...++.+.+|++..... .......... ....
T Consensus 153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~-l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY-AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE-EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 99999987 4322221 2222 3346788999999985 445666889999999964221 1111111111 1234
Q ss_pred ceEEEEEcCCCCEEEEee-CCCcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEc--CC
Q psy17188 397 YIRSVKLLPDGRTLIVGG-EASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDL--HN 470 (504)
Q Consensus 397 ~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~--~~ 470 (504)
.+..++|+|+|++|+++. .++.|.+||+. +++.........+.. +..++|+|++++|++++ .++.|.+|++ .+
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 567899999999887554 78999999998 333333333333333 78899999999988887 5899999954 46
Q ss_pred cce--EEEEeecCCceEEEEEccCCCE
Q psy17188 471 QTL--VRQFQGHTDGASCIDISADGTK 495 (504)
Q Consensus 471 ~~~--~~~~~~h~~~v~~~~~s~d~~~ 495 (504)
++. +..+.. .....+++|.++.+.
T Consensus 311 g~~~~~~~~~~-g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 311 GLLHEKGRYAV-GQGPMWVVVNAHEGG 336 (343)
T ss_dssp TEEEEEEEEEC-SSSCCEEEEEEEC--
T ss_pred ceeeEcccccc-CCCCeeEEEEcccCC
Confidence 643 444443 345778888886543
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=2e-26 Score=213.20 Aligned_cols=307 Identities=16% Similarity=0.273 Sum_probs=204.6
Q ss_pred EEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC-CcEEEEeCC--CCCccceeeeecC
Q psy17188 127 YVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLA--SPTPRIKAELTSS 202 (504)
Q Consensus 127 ~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~--~~~~~~~~~~~~~ 202 (504)
++++++ |+.|++|+++..+.. .......+...+.+++|+|++++|++++.+ +.|.+|++. +++......+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGAL---TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCE---EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcE---EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 444434 999999999642221 222223567789999999999999888876 899999998 4444333444443
Q ss_pred cCceEEEEECCCCCEEEEEeC-CCcEEEEEC---CCCeEEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCC-
Q psy17188 203 APACYALAISPDSKVCFSCCS-DGNIAVWDL---HNQTLVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLRE- 276 (504)
Q Consensus 203 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~- 276 (504)
. .+..++|+|++++|++++. ++.|.+||+ ...+.+..+.. ...+.+++|+|++++|++++ .++.|++||+.+
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 3 6789999999998877665 788999999 44455555554 34688999999999888776 899999999987
Q ss_pred CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCC--CCccceeeec---c---CCC
Q psy17188 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS--PTPRIKAELT---S---SAP 347 (504)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~--~~~~~~~~~~---~---~~~ 347 (504)
+++..... ..........+..++|+|+++++++++ .++.+.+|++.. ++........ . ...
T Consensus 162 ~~~~~~~~----------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 162 GHLVAQDP----------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp SCEEEEEE----------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred Cceeeecc----------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 65431100 011112234678899999999776654 789999999964 3222122222 1 123
Q ss_pred ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCC-
Q psy17188 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLA- 425 (504)
Q Consensus 348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~- 425 (504)
.+..++|+|+++. ++++...++.|.+||+...... ............+..++|+|+|++|++++ .++.|.+|+++
T Consensus 232 ~~~~i~~s~dg~~-l~v~~~~~~~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 232 WAADIHITPDGRH-LYACDRTASLITVFSVSEDGSV--LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CEEEEEECTTSSE-EEEEETTTTEEEEEEECTTSCC--EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CccceEECCCCCE-EEEEecCCCEEEEEEEcCCCCc--eEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 4567999999985 4556678999999999742211 11111112223378999999999888887 57999999554
Q ss_pred -CCCcceeecccCCCCceeEEEECCCCC
Q psy17188 426 -SPTPRIKAELTSSAPACYALAISPDSK 452 (504)
Q Consensus 426 -~~~~~~~~~~~~~~~~v~~l~~s~~~~ 452 (504)
+++......+... ....+++|.++.+
T Consensus 309 ~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 309 EQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp TTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred CCceeeEccccccC-CCCeeEEEEcccC
Confidence 4443333333322 2345566666543
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.1e-26 Score=236.37 Aligned_cols=324 Identities=10% Similarity=0.083 Sum_probs=213.1
Q ss_pred eEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeecC--------------cCceEEEEECCCCCEEEEEeCCC
Q psy17188 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSS--------------APACYALAISPDSKVCFSCCSDG 225 (504)
Q Consensus 162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~dg 225 (504)
+..+.|. ++.+++++.++ | +||+.+++. ......... ...|.+++|+|| +.++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4557788 66677777777 8 999998775 322211110 146999999999 666555 459
Q ss_pred cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-----CceEEEeecCCCCC-CCcccceec
Q psy17188 226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-----GCVKVWDISQPGSK-TPVSQLDCL 299 (504)
Q Consensus 226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-----~~~~~~~~~~~~~~-~~~~~~~~~ 299 (504)
.|++||+.+++..... .+...+.+++|+|||++|+++ .|+.|++||+.+ ++............ .... ...
T Consensus 102 ~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~~~ 177 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA--VHQ 177 (706)
T ss_dssp EEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC--CGG
T ss_pred EEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc--hhh
Confidence 9999999998765544 467788999999999999985 689999999988 65431100000000 0000 001
Q ss_pred ccCCceEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCCccceeeeccCC
Q psy17188 300 QRDNYIRSVKLLPDGRTLIVGG---------------------------------EASNLSIWDLASPTPRIKAELTSSA 346 (504)
Q Consensus 300 ~~~~~v~~~~~~~~~~~l~~~~---------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~ 346 (504)
.+...+.++.|+|||++|++++ .+..|++||+.+++.........+.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 1123368899999999999987 4467999999887543333223456
Q ss_pred CceeeEEECCCCCCceeeeccCC-----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcE
Q psy17188 347 PACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNL 419 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i 419 (504)
..+..++|+||++. +++++.+ ..|.+||+.++.....+...........+..++|+| ||++++++..++.+
T Consensus 258 ~~~~~~~~spdg~~--l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 258 KFLTNLSWSPDENI--LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp CEEEEEEECTTSSE--EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred eeEeeEEEECCCCE--EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 67899999999994 4444444 389999988752221111111111111245789999 99999999999999
Q ss_pred EEeeCC-CCCcceeecccCCCCceeE-EEECCCCCEEEEeeC-CC----cEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188 420 SIWDLA-SPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCS-DG----NIAVWDLHNQTLVRQFQGHTDGASCIDISAD 492 (504)
Q Consensus 420 ~iwd~~-~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d 492 (504)
++|+++ ++.. ...+..+...+.. ++|+||++.|+.++. ++ .|+.||+.+++ ...+. |...+.+++|+||
T Consensus 336 ~l~~~~~~~~~--~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spd 411 (706)
T 2z3z_A 336 HLYLYDTTGRL--IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPD 411 (706)
T ss_dssp EEEEEETTSCE--EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTT
T ss_pred EEEEEECCCCE--EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCC
Confidence 999876 3332 2334455566766 799999998876554 44 67777877766 33443 6778999999999
Q ss_pred CCEEEEecC
Q psy17188 493 GTKLWTGGL 501 (504)
Q Consensus 493 ~~~l~s~s~ 501 (504)
|++|+..+.
T Consensus 412 g~~l~~~~~ 420 (706)
T 2z3z_A 412 GSAIIDIFQ 420 (706)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEec
Confidence 999887644
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=9.1e-26 Score=207.72 Aligned_cols=285 Identities=13% Similarity=0.161 Sum_probs=200.1
Q ss_pred EEccCCCE-EEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeE-EEeec
Q psy17188 166 KLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTL-VRQFQ 242 (504)
Q Consensus 166 ~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~ 242 (504)
.|.+++++ +++.+.++.|.+||+.+++.. ..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL--NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE--EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee--eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 45565555 667778899999999987653 3334445556 9999999997776665 88999999999987 77777
Q ss_pred CCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE
Q psy17188 243 GHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV 319 (504)
Q Consensus 243 ~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 319 (504)
.+..+..+++|+|++++|+++..++ .|.+||+.+++.. ........+.+++|+|+|+++++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~----------------~~~~~~~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI----------------STIPIPYDAVGIAISPNGNGLIL 144 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE----------------EEEECCTTEEEEEECTTSSCEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE----------------EEEECCCCccceEECCCCCEEEE
Confidence 6766666699999999999655553 8999999988742 12233445689999999986655
Q ss_pred E-eCCCc-EEEEeCCCCCccce--eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188 320 G-GEASN-LSIWDLASPTPRIK--AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD 395 (504)
Q Consensus 320 ~-~~dg~-i~v~d~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (504)
+ ..++. +.+|++........ ............++|+|+++. ++++...++.|.+||+........... ....
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~d~~~~~~~~~~~~---~~~~ 220 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF-AFVANLIGNSIGILETQNPENITLLNA---VGTN 220 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE-EEEEETTTTEEEEEECSSTTSCEEEEE---EECS
T ss_pred EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE-EEEEeCCCCeEEEEECCCCcccceeee---ccCC
Confidence 5 55578 99999875432211 112233446789999999985 556666789999999986544111222 2234
Q ss_pred CceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCC----C---CceeEEEECCCCCEEEEeeC-CCcEEEE
Q psy17188 396 NYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSS----A---PACYALAISPDSKVCFSCCS-DGNIAVW 466 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~----~---~~v~~l~~s~~~~~l~s~~~-dg~i~iw 466 (504)
..+..++|+|||++|++++ .++.|.+||+.+++.......... . .....++|+||+++|++++. ++.|.+|
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 5677999999999777665 477899999988765222222111 1 12245899999998876655 6699999
Q ss_pred EcCCcce
Q psy17188 467 DLHNQTL 473 (504)
Q Consensus 467 d~~~~~~ 473 (504)
|+.+...
T Consensus 301 d~~~~~~ 307 (331)
T 3u4y_A 301 TISGKVV 307 (331)
T ss_dssp ETTSCEE
T ss_pred EecCCcc
Confidence 9987543
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=6e-26 Score=231.69 Aligned_cols=334 Identities=10% Similarity=0.004 Sum_probs=217.6
Q ss_pred CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCC---cEEEEEEcCCCcEEEEec-C---------CeEE
Q psy17188 72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGE---VVCAVTISNPTKYVYTGG-K---------GCVK 137 (504)
Q Consensus 72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~---~V~~v~~s~~~~~l~~~~-d---------~~i~ 137 (504)
..+..++|+|||+.+.. ..++.+.+|+...... ...+ +|.. .|.+++|||||++|+++. + +.+.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34667788888885544 4556677777654433 3334 4544 499999999999999876 3 7899
Q ss_pred EEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC-------------
Q psy17188 138 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP------------- 204 (504)
Q Consensus 138 vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~------------- 204 (504)
+||++++.. ..+. ....+...+..++|||||++||+++. +.|++||+.+++... ....+..
T Consensus 95 ~~d~~~~~~-~~l~--~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 95 LSKIPHGDP-QSLD--PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEESSSCCC-EECC--CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHH
T ss_pred EEECCCCce-Eecc--CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEE
Confidence 999988643 1111 11234556889999999999999875 799999998765432 2222222
Q ss_pred -----ceEEEEECCCCCEEEEEeCCC----------------------------------cEEEEECCCCeEEEeecCC-
Q psy17188 205 -----ACYALAISPDSKVCFSCCSDG----------------------------------NIAVWDLHNQTLVRQFQGH- 244 (504)
Q Consensus 205 -----~v~~~~~s~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~h- 244 (504)
.+.+++|+|||+.|++++.|+ .|++||+.+++....+..+
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence 237899999999999887553 7999999988865666654
Q ss_pred -----CCCeEEEEEccCCCEEEEEcC----CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce----EEEEEc
Q psy17188 245 -----TDGASCIDISADGTKLWTGGL----DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI----RSVKLL 311 (504)
Q Consensus 245 -----~~~v~~~~~~~~~~~l~s~~~----dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~ 311 (504)
...+..++|+|||++|++.+. +..|++||+.+++.... ....+...+ ..++|+
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~s 314 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK--------------HEDESEAWLHRQNEEPVFS 314 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE--------------EEEECSSCCCCCCCCCEEC
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE--------------EEeccCCEEeccCCCceEc
Confidence 667899999999998876643 35799999998875321 111122222 368999
Q ss_pred CCCCEEEE--EeCCC------cEEEEe-CCCCCccceeeeccCCCceee-EEECCCCCCceeeeccCC--CeEEEEecCC
Q psy17188 312 PDGRTLIV--GGEAS------NLSIWD-LASPTPRIKAELTSSAPACYA-LAISPDSKSPFFSSHHYK--SCVKVWDISQ 379 (504)
Q Consensus 312 ~~~~~l~~--~~~dg------~i~v~d-~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~--~~i~i~d~~~ 379 (504)
|||+.|+. ...++ .|.+|| ...+.......+......+.. ++|+|+++.+ +.++..+ +.+++|++..
T Consensus 315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKI-YFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEE-EEEESSSCTTCCEEEEECS
T ss_pred CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEE-EEEEcCCCCcceEEEEEeC
Confidence 99997775 45666 567777 343321002222222334444 6999999953 2334444 7899999875
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCC
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPT 428 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~ 428 (504)
..............+...+..++|+|||++|+.....- ...+++..++.
T Consensus 394 ~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~ 445 (723)
T 1xfd_A 394 VGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK 445 (723)
T ss_dssp STTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred CCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCC
Confidence 43211111110011455678999999999888754332 23445554433
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1e-24 Score=202.57 Aligned_cols=274 Identities=11% Similarity=0.131 Sum_probs=204.4
Q ss_pred CCceEEEEEccCCCEEEEecC-------CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEE
Q psy17188 159 DNYIRSVKLLPDGRTLIVGGE-------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVW 230 (504)
Q Consensus 159 ~~~v~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw 230 (504)
...+..++|+|++++|++++. ++.|.+||..+++... .+.. ...+..++|+|++++++++ ..++.|.+|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ--AIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE--EEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE--EEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 456789999999999988774 5689999998776432 2322 2346789999999955544 557899999
Q ss_pred ECCCCeEEEeecCCCCC---------eEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188 231 DLHNQTLVRQFQGHTDG---------ASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL 299 (504)
Q Consensus 231 d~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (504)
|+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++... ...
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---------------~~~ 181 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---------------AIQ 181 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE---------------EEC
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE---------------Eec
Confidence 99999988888765432 78899999999877765 47899999999887421 111
Q ss_pred ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 300 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
.....+..++|+|+++++++++.++.+.+||..+++....... ..
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~-----------------------------------~~ 226 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL-----------------------------------LD 226 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-----------------------------------CC
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-----------------------------------CC
Confidence 1334477899999999999999999999999887532111000 00
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
..+...+..++|+|+++++++++.+ +.|.+||..+++......... ...++|+|+++++++++
T Consensus 227 ------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 227 ------------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp ------------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEE
T ss_pred ------------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEE
Confidence 0123345689999999987776654 889999998887655554432 24579999999766655
Q ss_pred -CCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188 459 -SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD 502 (504)
Q Consensus 459 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D 502 (504)
.++.|.+||+.+++.+..+..+ ..+.+++|+|||++|+++..+
T Consensus 291 ~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 291 RQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 6899999999999998888754 468999999999988877665
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.9e-25 Score=202.01 Aligned_cols=258 Identities=14% Similarity=0.167 Sum_probs=190.1
Q ss_pred EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCccccee
Q psy17188 220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDC 298 (504)
Q Consensus 220 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~ 298 (504)
..+.|+.|++||+.+++..... .|...|.+++|+|++++|++++ ++.|++||+.+ ++... ...
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~--------------~~~ 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW-QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK--------------VDT 80 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE-EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE--------------CCC
T ss_pred CCCcceeEEEEeCCCCceeeec-cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE--------------ecc
Confidence 3457889999999998876544 4889999999999999999887 88999999998 76421 111
Q ss_pred cccCCceEEEEEcCCCCEEEEEeC--CCcEEEE--eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188 299 LQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIW--DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV 374 (504)
Q Consensus 299 ~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~--d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i 374 (504)
......+.+++|+|++++|++++. ++...+| +..+.. ...+..+. .+..++|+|+++. +++++..++.+++
T Consensus 81 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~-~~~~~~~spdg~~-l~~~~~~~~~~~l 155 (297)
T 2ojh_A 81 GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKNL-PSYWHGWSPDGKS-FTYCGIRDQVFDI 155 (297)
T ss_dssp TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSSS-SEEEEEECTTSSE-EEEEEEETTEEEE
T ss_pred ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecCC-CccceEECCCCCE-EEEEECCCCceEE
Confidence 122356888999999999999983 3445555 444432 22222222 4888999999985 3446777899999
Q ss_pred EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188 375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV 453 (504)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~ 453 (504)
|+++...... .....+...+.+++|+|++++|++++ .++.+++|++..... ....+..+...+..++|+|++++
T Consensus 156 ~~~~~~~~~~----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 156 YSMDIDSGVE----TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-SVERITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp EEEETTTCCE----EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-CEEECCCCSEEEEEEEECTTSSE
T ss_pred EEEECCCCcc----eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-CcEEEecCCcccCCeEECCCCCE
Confidence 9975432211 12234567789999999999888766 588999998863221 12334556677889999999999
Q ss_pred EEEeeCC-----------CcEEEEEcCCcce--EEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 454 CFSCCSD-----------GNIAVWDLHNQTL--VRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 454 l~s~~~d-----------g~i~iwd~~~~~~--~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
|++++.+ +.|++||+.+++. +..+.+|...+.+++|+||+++|++++.|.
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9988765 5699999998876 444557888999999999999999888764
No 144
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.94 E-value=2e-25 Score=227.44 Aligned_cols=337 Identities=14% Similarity=0.069 Sum_probs=222.4
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCC---CceEEEEEccCCCEEEEecC---------CCcEEE
Q psy17188 118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRD---NYIRSVKLLPDGRTLIVGGE---------ASNLSI 185 (504)
Q Consensus 118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~---------dg~i~i 185 (504)
.++|+|++++++++.|+.|++||+.+++.. ..+. .+. ..+.+++|||||++|++++. ++.|++
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~---~~~~--~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSY---TILS--NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEE---EEEC--HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEE---EEEc--cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 678999998888878999999999886422 1111 121 13889999999999999876 689999
Q ss_pred EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCe----------------
Q psy17188 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGA---------------- 248 (504)
Q Consensus 186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v---------------- 248 (504)
||+.+++......+. ..+..++|||||+.|+++. ++.|++||+.+++..+.. .++...|
T Consensus 95 ~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 95 YDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp EETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred EECCCCccccceecC---cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence 999877641112222 4578899999999999885 789999999988765543 2232222
Q ss_pred -EEEEEccCCCEEEEEcCCC----------------------------------eEEEEECCCCceE-EEeecCCCCCCC
Q psy17188 249 -SCIDISADGTKLWTGGLDN----------------------------------TVRSWDLREGCVK-VWDISQPGSKTP 292 (504)
Q Consensus 249 -~~~~~~~~~~~l~s~~~dg----------------------------------~i~~wd~~~~~~~-~~~~~~~~~~~~ 292 (504)
.+++|+|||++|++++.|. .|++||+.+++.. ...+..
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~------ 244 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV------ 244 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC------
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC------
Confidence 4899999999999987652 6778888776521 000000
Q ss_pred cccceecccCCceEEEEEcCCCCEEEEEeCC----CcEEEEe----CCCCCccceee--eccCCCcee-----eEEECCC
Q psy17188 293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWD----LASPTPRIKAE--LTSSAPACY-----ALAISPD 357 (504)
Q Consensus 293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d----~~~~~~~~~~~--~~~~~~~i~-----~~~~~~~ 357 (504)
......+...+..++|+||++++++.... ..|.+|| ..+++...... ...+...+. .+.|+||
T Consensus 245 --~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 322 (719)
T 1z68_A 245 --PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD 322 (719)
T ss_dssp --CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT
T ss_pred --CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC
Confidence 01123466778999999998777664332 2488899 76654333221 134444555 7899999
Q ss_pred CCCceeeeccCCC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCC--CC
Q psy17188 358 SKSPFFSSHHYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLAS--PT 428 (504)
Q Consensus 358 ~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~--~~ 428 (504)
++.+++++...++ .|.+||+.... . ..+ ..+...+..+.++ +++.|+..+.+ +..++|.+.. +.
T Consensus 323 g~~l~~~~~~~~g~~~l~~~~~~~~~-~---~~l--t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~ 395 (719)
T 1z68_A 323 AISYYKIFSDKDGYKHIHYIKDTVEN-A---IQI--TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYP 395 (719)
T ss_dssp SSCEEEEEECTTSCEEEEEESSCSTT-C---EEC--SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSS
T ss_pred CCeEEEEEEccCCceEEEEEECCCCc-e---Eec--ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCC
Confidence 9975555555555 46666665432 1 111 1234456777777 88877766654 7788888754 22
Q ss_pred c-ceeec--ccCCCCceeEEEECCCCCEEEEe-eCC--CcEEEEEcCCcceEEEEe
Q psy17188 429 P-RIKAE--LTSSAPACYALAISPDSKVCFSC-CSD--GNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 429 ~-~~~~~--~~~~~~~v~~l~~s~~~~~l~s~-~~d--g~i~iwd~~~~~~~~~~~ 478 (504)
. ..... +.++...+..+.|+||+++++.. +.+ ..+++||+.+++.+..+.
T Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 396 PSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp CCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred CCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 1 11111 22245567788999999887743 333 468899998887654443
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=5.2e-25 Score=203.14 Aligned_cols=278 Identities=13% Similarity=0.129 Sum_probs=202.2
Q ss_pred CEEEEecCCCcEEEEeCCCCCccceeeeecCc-C-ceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCC----
Q psy17188 172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSA-P-ACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGH---- 244 (504)
Q Consensus 172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h---- 244 (504)
++|++++.++.|.+||+.+++.. ..+.... . .+..++|+|+++.++ ++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD--KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE--EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEE--EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 47888999999999999876542 2333221 1 477899999998664 5556789999999999888776632
Q ss_pred -CCCeEEEEEccCCCEEEEEc------------CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 245 -TDGASCIDISADGTKLWTGG------------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 245 -~~~v~~~~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
...+.+++|+|++++|++++ .++.|.+||+.+++.. ........+..++|+
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~----------------~~~~~~~~~~~~~~s 143 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR----------------KAFEAPRQITMLAWA 143 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE----------------EEEECCSSCCCEEEC
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE----------------EEEeCCCCcceeEEC
Confidence 12677899999999988886 5799999999887642 111223457788999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC---------------------
Q psy17188 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS--------------------- 370 (504)
Q Consensus 312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------------------- 370 (504)
|++++|+++ ++.|.+||+.+++... .+..+. ....+.++|+++.+ ++++..++
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~s~dg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVE--DKPIQS-WEAETYAQPDVLAV-WNQHESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEE--EECSTT-TTTTTBCCCBCCCC-CCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEee--eeeccc-cCCCceeCCCccEE-eeeccCCCceeeeeecccccccccccccc
Confidence 999988888 6889999998774332 222221 11233789998863 33333333
Q ss_pred --eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188 371 --CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS 448 (504)
Q Consensus 371 --~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 448 (504)
.|.+||....... ......+...+..++|+|||++++++ ++.|++||+.+++........ ..+.+++|+
T Consensus 218 ~~~v~~~d~~~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s 288 (337)
T 1pby_B 218 RTGLLTMDLETGEMA----MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVS 288 (337)
T ss_dssp EEEEEEEETTTCCEE----EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEEC
T ss_pred ccceEEEeCCCCCce----EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC---CceeeEEEC
Confidence 4688998765332 22223445667899999999999988 789999999887654444332 346788999
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC
Q psy17188 449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482 (504)
Q Consensus 449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~ 482 (504)
||+++|++++.++.|++||+.+++.+..+..+..
T Consensus 289 ~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 289 TDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp TTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 9999999999999999999999999988876543
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=3.8e-24 Score=198.75 Aligned_cols=278 Identities=14% Similarity=0.111 Sum_probs=201.8
Q ss_pred eecCCCcEEEEEEcCCCcEEEEec--------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cC
Q psy17188 109 TLSHGEVVCAVTISNPTKYVYTGG--------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GE 179 (504)
Q Consensus 109 ~~~h~~~V~~v~~s~~~~~l~~~~--------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~ 179 (504)
.......+..++|+|+++++++++ ++.|.+||..+++.. ..+. ....+..++|+|++++++++ ..
T Consensus 36 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~---~~~~~~~~~~s~dg~~l~v~~~~ 109 (353)
T 3vgz_A 36 RKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT---QAIH---NDLKPFGATINNTTQTLWFGNTV 109 (353)
T ss_dssp EEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE---EEEE---ESSCCCSEEEETTTTEEEEEETT
T ss_pred hhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE---EEEe---cCCCcceEEECCCCCEEEEEecC
Confidence 344556788999999998887766 568999999875322 2222 23447789999999966554 55
Q ss_pred CCcEEEEeCCCCCccceeeeecCcC---------ceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEeecCCCCCe
Q psy17188 180 ASNLSIWDLASPTPRIKAELTSSAP---------ACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDGA 248 (504)
Q Consensus 180 dg~i~iw~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v 248 (504)
++.|.+||..+++... .+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+
T Consensus 110 ~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 187 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS 187 (353)
T ss_dssp TTEEEEEETTTCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC
T ss_pred CCEEEEEeCCCCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc
Confidence 7999999998776432 2333221 268899999999877776 47889999999999999888666778
Q ss_pred EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-CcEE
Q psy17188 249 SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLS 327 (504)
Q Consensus 249 ~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~ 327 (504)
.+++|+|++++|++++.++.|.+||+.+++.... .. .....+...+..++|+|+++++++++.+ +.|.
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~-~~----------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSR-KK----------LLDDGKEHFFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE-EE----------CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE-EE----------cCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence 9999999999999999999999999998875321 00 0011234457889999999987777654 8899
Q ss_pred EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188 328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 407 (504)
Q Consensus 328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 407 (504)
+||..+++.... +... . ...++|+|+|
T Consensus 257 ~~d~~~~~~~~~-----------------------------------~~~~---------------~---~~~~~~s~dg 283 (353)
T 3vgz_A 257 VVDTRNGNILAK-----------------------------------VAAP---------------E---SLAVLFNPAR 283 (353)
T ss_dssp EEETTTCCEEEE-----------------------------------EECS---------------S---CCCEEEETTT
T ss_pred EEECCCCcEEEE-----------------------------------EEcC---------------C---CceEEECCCC
Confidence 999876532110 0000 0 0268899999
Q ss_pred CEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188 408 RTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 461 (504)
Q Consensus 408 ~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg 461 (504)
+++++++ .++.|.+||..+++....... ...+..++|+||+++|+++..++
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEccc
Confidence 9766655 688999999988765544433 23578899999999888776654
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1e-24 Score=200.60 Aligned_cols=271 Identities=14% Similarity=0.149 Sum_probs=190.9
Q ss_pred EECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCC
Q psy17188 210 AISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQP 287 (504)
Q Consensus 210 ~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~ 287 (504)
.|.++++ .+++.+.++.|.+||+.+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~------ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV------ 76 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE------
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE------
Confidence 4555555 56777789999999999999988888777777 9999999997666655 8899999999887411
Q ss_pred CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188 288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS 364 (504)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 364 (504)
.....+.....+++|+|++++++++..++ .|.+||+.+++... .+.. ......++|+|+++. +++
T Consensus 77 --------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~--~~~~-~~~~~~~~~spdg~~-l~~ 144 (331)
T 3u4y_A 77 --------VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS--TIPI-PYDAVGIAISPNGNG-LIL 144 (331)
T ss_dssp --------EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE--EEEC-CTTEEEEEECTTSSC-EEE
T ss_pred --------EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE--EEEC-CCCccceEECCCCCE-EEE
Confidence 11112223333499999999999655553 89999998764332 2332 335689999999986 555
Q ss_pred eccCCCe-EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCc---ceeecccCCC
Q psy17188 365 SHHYKSC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP---RIKAELTSSA 439 (504)
Q Consensus 365 ~~~~~~~-i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~ 439 (504)
+...++. +.+|++.......... ............++|+|+|+++++++ .++.|++||+.+++. ..... ..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~ 220 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TN 220 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CS
T ss_pred EecCCCceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CC
Confidence 5556677 9999998643322221 12223445678999999999765554 688999999998776 33333 23
Q ss_pred CceeEEEECCCCCEEEEee-CCCcEEEEEcCCcce--EEEEeec----CC---ceEEEEEccCCCEEEEecCCC
Q psy17188 440 PACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTL--VRQFQGH----TD---GASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 440 ~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~~~~s~d~~~l~s~s~Dg 503 (504)
..+..++|+|||++|++++ .++.|.+||+.+++. +..+..+ .. ....++|+||+++|++++.++
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 4567889999999776654 578899999999887 4444322 22 235689999999997776653
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1.9e-24 Score=200.22 Aligned_cols=290 Identities=15% Similarity=0.240 Sum_probs=191.1
Q ss_pred CCCcEEEEeCCCCCccce-eeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCe--EEEeecCCCCCeEEEE
Q psy17188 179 EASNLSIWDLASPTPRIK-AELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQT--LVRQFQGHTDGASCID 252 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~ 252 (504)
.++.|.+|+++....... .....+......++|+||++ |++++. ++.|.+|++.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 355688887764332221 12334455678899999999 555554 6899999998775 4445455777889999
Q ss_pred EccCCCEEEEEc-CCCeEEEEECC-CCceEEEe-ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188 253 ISADGTKLWTGG-LDNTVRSWDLR-EGCVKVWD-ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 329 (504)
Q Consensus 253 ~~~~~~~l~s~~-~dg~i~~wd~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~ 329 (504)
|+|++++|++++ .++.+.+|++. ++...... ...... .+. .......+.+++|+|+|+.+++...++.|.+|
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-~p~----~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-GPR----PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-CSS----TTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-CCC----ccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 999999888877 68999999995 44433221 111110 000 11223458899999999966666678899999
Q ss_pred eCC-CCCccceeeecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-CCccccccccc----CCCceEEEE
Q psy17188 330 DLA-SPTPRIKAELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQ----RDNYIRSVK 402 (504)
Q Consensus 330 d~~-~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~~----~~~~i~~~~ 402 (504)
++. +++......... ....+..++|+|+++. ++++...++.+.+|++..... ........... ....+..++
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY-AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR 246 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCE-EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE
Confidence 998 333222222222 2336778999999985 555667789999999875211 11111111111 124588999
Q ss_pred EcCCCCEEEE-eeCCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCC-CcEEEE--EcCCcceEE
Q psy17188 403 LLPDGRTLIV-GGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVW--DLHNQTLVR 475 (504)
Q Consensus 403 ~s~~g~~l~~-~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-g~i~iw--d~~~~~~~~ 475 (504)
|+|||++|++ ...++.|.+|++.. +..........+...+..++|+||+++|++++.+ +.|.+| |.+++++..
T Consensus 247 ~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 247 LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 9999998754 55689999999873 2333334444445567889999999999888764 899999 555676543
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5.2e-25 Score=199.06 Aligned_cols=258 Identities=15% Similarity=0.132 Sum_probs=192.1
Q ss_pred ecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeecCC-CCCeEEEEEc
Q psy17188 177 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGH-TDGASCIDIS 254 (504)
Q Consensus 177 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~~~~~ 254 (504)
++.++.|++||+.+++. ..+..|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+
T Consensus 18 ~~~~~~i~~~d~~~~~~---~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKM---RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCCEEEEEEETTTTEE---EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCcceeEEEEeCCCCce---eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 45789999999987653 34556788899999999999999886 78999999999 8777777665 3678999999
Q ss_pred cCCCEEEEEcC--CC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEE
Q psy17188 255 ADGTKLWTGGL--DN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIW 329 (504)
Q Consensus 255 ~~~~~l~s~~~--dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~ 329 (504)
|++++|++++. ++ .|..|+..+++.. .......+..++|+|+++.|+ ++..++.+++|
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPR-----------------LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCE-----------------ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceE-----------------EeecCCCccceEECCCCCEEEEEECCCCceEEE
Confidence 99999999883 34 4444555554421 112223488899999999887 67788999999
Q ss_pred eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188 330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 409 (504)
Q Consensus 330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 409 (504)
++.... .....+..+...+..++|+|+++. +++++..++.+++|++...... .. ....+...+..++|+|+|++
T Consensus 157 ~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~~~~~~~~~--~~--~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 157 SMDIDS-GVETRLTHGEGRNDGPDYSPDGRW-IYFNSSRTGQMQIWRVRVDGSS--VE--RITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp EEETTT-CCEEECCCSSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTSSC--EE--ECCCCSEEEEEEEECTTSSE
T ss_pred EEECCC-CcceEcccCCCccccceECCCCCE-EEEEecCCCCccEEEECCCCCC--cE--EEecCCcccCCeEECCCCCE
Confidence 864332 223445556678999999999984 3344446888999988643211 11 12234567889999999999
Q ss_pred EEEeeCC-----------CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188 410 LIVGGEA-----------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 461 (504)
Q Consensus 410 l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg 461 (504)
|++++.+ +.|++||+.+++.........+...+..++|+|++++|++++.+.
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9988765 469999999887665655556677788899999999999887654
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2.5e-23 Score=193.74 Aligned_cols=310 Identities=14% Similarity=0.190 Sum_probs=200.5
Q ss_pred CCCEEEEec----CCCcEEEEeCCC--CCccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCC--Ce-
Q psy17188 170 DGRTLIVGG----EASNLSIWDLAS--PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHN--QT- 236 (504)
Q Consensus 170 ~~~~l~~~~----~dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~--~~- 236 (504)
...++++|+ .++.|.+|+++. ++....... +......++|+||+++|++++.+ +.|.+|++.. ++
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 334555653 456899997754 433323333 56667889999999999999886 7999998865 43
Q ss_pred -EEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCc-eEEE-e-ecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 237 -LVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGC-VKVW-D-ISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 237 -~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
.+.....+......+++ ++++|++++ .++.+.+|++.... +... . ....+. . ..........+.+++|+
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~-~---~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGS-G---PDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCC-C---SCTTTCSSCCEEEEEEC
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCC-C---CCccccCCCcceEEEEC
Confidence 33444445567778888 777777665 67899999997532 1100 0 000000 0 00011223446889999
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCCCc----c-c------eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 312 PDGRTLIVGG-EASNLSIWDLASPTP----R-I------KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 312 ~~~~~l~~~~-~dg~i~v~d~~~~~~----~-~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
|+|+++++++ .++.+.+|++..... . . .............++|+|+++. ++++...++.|.+|++..
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKF-AYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTCEEEEEEEET
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCE-EEEEcCCCCeEEEEEecC
Confidence 9999776655 478999999876542 1 1 1112233446789999999984 445555789999999974
Q ss_pred CCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCC--CcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCEE
Q psy17188 380 PGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVC 454 (504)
Q Consensus 380 ~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~d--g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~l 454 (504)
+.. ...... ....+......++|+|||++|+++..+ +.|.+|++. +++......... ...+..++|+||+++|
T Consensus 243 g~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l 320 (361)
T 3scy_A 243 GML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYL 320 (361)
T ss_dssp TEE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEE
T ss_pred Cce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEE
Confidence 321 111111 112233456799999999999777655 889999986 344333333333 4457789999999999
Q ss_pred EEee-CCCcEEEEE--cCCcceEEEE-eecCCceEEEEEc
Q psy17188 455 FSCC-SDGNIAVWD--LHNQTLVRQF-QGHTDGASCIDIS 490 (504)
Q Consensus 455 ~s~~-~dg~i~iwd--~~~~~~~~~~-~~h~~~v~~~~~s 490 (504)
++++ .++.|.+|+ .+++++.... ..+...+.|+.|.
T Consensus 321 ~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 321 LVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 8887 578899965 4567665443 2345678999886
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.8e-24 Score=199.49 Aligned_cols=277 Identities=17% Similarity=0.214 Sum_probs=195.1
Q ss_pred cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCC-ceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccceeeeec-
Q psy17188 126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTS- 201 (504)
Q Consensus 126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~- 201 (504)
+++++++ ++.|.+||..+++. +..+.. ++.. .+.+++|+|++++++ ++..++.|.+||+.+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV---DKVITI-ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE---EEEEEC-TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcE---EEEEEc-CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 3566666 99999999987532 222221 2222 478999999998765 55567899999998776432222222
Q ss_pred --CcCceEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188 202 --SAPACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 267 (504)
Q Consensus 202 --~~~~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 267 (504)
+...+..++|+|++++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SS
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CC
Confidence 122467899999999888886 579999999999998888774 5568889999999988887 68
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-----------------------
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----------------------- 324 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------------------- 324 (504)
.|.+||+.+++... .+. ...... .+.|+|+++.+++....+
T Consensus 155 ~i~~~d~~~~~~~~-~~~------------~~~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 155 DLHVMDPEAGTLVE-DKP------------IQSWEA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp SEEEEETTTTEEEE-EEC------------STTTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred eEEEEECCCCcEee-eee------------ccccCC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 89999999887531 111 000011 125678877665544322
Q ss_pred -cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188 325 -NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 403 (504)
Q Consensus 325 -~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~ 403 (504)
.|.+||+.+++.. ......+...+..++|+|+++. ++++ ++.|.+||+........ ......+.+++|
T Consensus 219 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~--l~~~--~~~v~~~d~~~~~~~~~------~~~~~~~~~~~~ 287 (337)
T 1pby_B 219 TGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR--AFGA--YNVLESFDLEKNASIKR------VPLPHSYYSVNV 287 (337)
T ss_dssp EEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE--EEEE--ESEEEEEETTTTEEEEE------EECSSCCCEEEE
T ss_pred cceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE--EEEe--CCeEEEEECCCCcCcce------ecCCCceeeEEE
Confidence 4689999887654 4445556667889999999984 4444 79999999876432211 122345679999
Q ss_pred cCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188 404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 436 (504)
Q Consensus 404 s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 436 (504)
+|+|++|++++.++.|++||+.+++........
T Consensus 288 s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 288 STDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 999999999999999999999988765554443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=1.8e-23 Score=193.56 Aligned_cols=280 Identities=13% Similarity=0.171 Sum_probs=188.8
Q ss_pred CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---CCcEEEEeCCCCCccceeeeecCcCceEEE
Q psy17188 133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYAL 209 (504)
Q Consensus 133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~ 209 (504)
++.|.+|+++... ..+..+....+...+..++|+|||+ |++++. ++.|.+|++.+++......+..+...+..+
T Consensus 15 ~~~i~v~~~d~~t--g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 15 SQGIYQGTLDTTA--KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp CCEEEEEEEETTT--TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCCEEEEEEcCCC--CeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 5678888876521 1222222234556788899999999 555543 689999999766544444545566778899
Q ss_pred EECCCCCEEEEEe-CCCcEEEEECC-CC--eEEEeecC---------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECC-
Q psy17188 210 AISPDSKVCFSCC-SDGNIAVWDLH-NQ--TLVRQFQG---------HTDGASCIDISADGTKLWTGGLDNTVRSWDLR- 275 (504)
Q Consensus 210 ~~s~~~~~l~~~~-~dg~i~iwd~~-~~--~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~- 275 (504)
+|+|++++|++++ .++.|.+|++. ++ +.+..+.. +...+.+++|+|+++++++...++.|++|++.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 9999999888887 67899999996 22 33333321 12348899999999977777778999999998
Q ss_pred CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEeCCC--CCccceeeeccCC------
Q psy17188 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLAS--PTPRIKAELTSSA------ 346 (504)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d~~~--~~~~~~~~~~~~~------ 346 (504)
++++.... .. .......+..++|+|+|+++++ ...++.+.+|++.. ++...........
T Consensus 172 ~g~~~~~~-----------~~-~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 172 AGQLSEQS-----------VL-TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TSCEEEEE-----------EE-ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred CCcEEEee-----------eE-EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 55543211 00 1112335678999999997666 45678999999875 3222222222222
Q ss_pred CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-CcEEEeeC-
Q psy17188 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDL- 424 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~i~iwd~- 424 (504)
..+..++|+|+++. ++++...++.|.+|++........... ...+...+..++|+|||++|++++.+ +.|.+|++
T Consensus 240 ~~~~~i~~spdG~~-l~v~~~~~~~v~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 240 NGAAAIRLSHDGHF-LYVSNRGYNTLAVFAVTADGHLTLIQQ--ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEECTTSCE-EEEEEETTTEEEEEEECGGGCEEEEEE--EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEECCCCCE-EEEEeCCCCEEEEEEECCCCcEEEeEE--EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 35788999999985 446666789999999874322111211 12234557799999999998888764 88999954
Q ss_pred -CCCCcc
Q psy17188 425 -ASPTPR 430 (504)
Q Consensus 425 -~~~~~~ 430 (504)
.+++..
T Consensus 317 ~~tg~l~ 323 (347)
T 3hfq_A 317 LTSGKLS 323 (347)
T ss_dssp TTTCCEE
T ss_pred CCCCeEE
Confidence 445433
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=6.6e-24 Score=216.30 Aligned_cols=318 Identities=12% Similarity=0.031 Sum_probs=209.3
Q ss_pred EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC---ceEEEEECCCCCEEEEEeC---------CCcEEEEE
Q psy17188 164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCS---------DGNIAVWD 231 (504)
Q Consensus 164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~---------dg~i~iwd 231 (504)
+++|+||+++++++ .|++|++||+.+++. ...+..+.. .+.+++|||||++|++++. ++.|++||
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQS--YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCE--EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcE--EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 77999999665554 699999999998764 333333332 3889999999999998876 78999999
Q ss_pred CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC---------
Q psy17188 232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD--------- 302 (504)
Q Consensus 232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 302 (504)
+.+++.+.... ....+..++|+|||+.|+++. |+.|++||+.+++..... ..+.. .....++.
T Consensus 97 ~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~--~~~~~----~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 97 LSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT--FNGRE----NKIFNGIPDWVYEEEML 168 (719)
T ss_dssp TTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--CCCBT----TTEEESSCCHHHHHHTT
T ss_pred CCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe--cCCCc----CCeEcccccceeeeecc
Confidence 99998732111 235688999999999999886 789999999888643211 00000 00001111
Q ss_pred CceEEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCCcc---ce---eee
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEAS----------------------------------NLSIWDLASPTPR---IK---AEL 342 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~---~~---~~~ 342 (504)
....+++|+|||++|++++.|. .|++||+.+++.. .. ..+
T Consensus 169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence 1225899999999999987542 7889999876431 11 112
Q ss_pred ccCCCceeeEEECCCCCCceeeecc--CC--CeEEEEe----cCCCCCCCcccccccccCCCceE-----EEEEcCCCCE
Q psy17188 343 TSSAPACYALAISPDSKSPFFSSHH--YK--SCVKVWD----ISQPGSKTPVSQLDCLQRDNYIR-----SVKLLPDGRT 409 (504)
Q Consensus 343 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~--~~i~i~d----~~~~~~~~~~~~~~~~~~~~~i~-----~~~~s~~g~~ 409 (504)
..+...+..++|+||++ ++++.. .+ ..|.+|| ..++....... .....+...+. .++|+|||+.
T Consensus 249 ~~~~~~~~~~~~SpD~~--~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDER--VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE-HIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp HTSCEEEEEEEESSSSE--EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE-EEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred CCCcceEEEeEEeCCCe--EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe-cccccCCceEccccCCccEECCCCCe
Confidence 35677889999999965 444422 22 3588888 55443222211 00023444555 7899999996
Q ss_pred EEE--eeCCC--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC-----CcEEEEEcCC--cc-eEEEE
Q psy17188 410 LIV--GGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHN--QT-LVRQF 477 (504)
Q Consensus 410 l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~-~~~~~ 477 (504)
|+. ...+| .|++||+.+++.. .+..+...+..+.++ +++.|+..+.+ +..++|.+.. +. ....+
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~~~---~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l 401 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVENAI---QITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCV 401 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTTCE---ECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEES
T ss_pred EEEEEEccCCceEEEEEECCCCceE---ecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceec
Confidence 654 44455 4777787765522 233344557777777 88877766654 7888998754 42 12333
Q ss_pred e----ecCCceEEEEEccCCCEEEEe
Q psy17188 478 Q----GHTDGASCIDISADGTKLWTG 499 (504)
Q Consensus 478 ~----~h~~~v~~~~~s~d~~~l~s~ 499 (504)
. +|...+..+.|+||+++++..
T Consensus 402 ~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 402 TCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp STTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred cCccCCCCCceEEEEECCCCCEEEEE
Confidence 3 255678899999999887753
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.1e-22 Score=207.22 Aligned_cols=352 Identities=14% Similarity=0.103 Sum_probs=211.8
Q ss_pred CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC---------CcEE
Q psy17188 114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLS 184 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~ 184 (504)
....+++|+||+++++++ |+.|++||+.+++....+..............++|||||++|++++.+ +.+.
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 345689999999999987 999999999887532221110000111123458999999999998865 5677
Q ss_pred EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCe---------------
Q psy17188 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGA--------------- 248 (504)
Q Consensus 185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v--------------- 248 (504)
+||+.+++. ..+..+...+...+|||||+.|+.+. ++.|++|++.+++..+.. .++...+
T Consensus 96 ~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 96 IYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 999998763 33566677899999999999999884 689999999988755432 2332222
Q ss_pred --EEEEEccCCCEEEEEcCCCe-EEEEECC---C--------------------C--ceEEEeecC---CCCCCCcccce
Q psy17188 249 --SCIDISADGTKLWTGGLDNT-VRSWDLR---E--------------------G--CVKVWDISQ---PGSKTPVSQLD 297 (504)
Q Consensus 249 --~~~~~~~~~~~l~s~~~dg~-i~~wd~~---~--------------------~--~~~~~~~~~---~~~~~~~~~~~ 297 (504)
..+.|+|||+.|+..+.|.+ +.+|++. . . ++.+|++.. ...... ..+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~-~~l~ 250 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS-IQIT 250 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE-EEEC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE-EEec
Confidence 34899999999998765433 4444321 0 0 122222222 100000 0111
Q ss_pred e----cccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCC----ccceeee--ccCCCce-----eeEEECCCC
Q psy17188 298 C----LQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPT----PRIKAEL--TSSAPAC-----YALAISPDS 358 (504)
Q Consensus 298 ~----~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~----~~~~~~~--~~~~~~i-----~~~~~~~~~ 358 (504)
. ..+...+..++|+|||+.++.... +..|.+||+.+++ ......+ ..+...+ ....|+||+
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 0 126677899999999997665532 2369999998875 2222222 3343333 378899999
Q ss_pred CCceeeeccCC--CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEe--eCCCCCc
Q psy17188 359 KSPFFSSHHYK--SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW--DLASPTP 429 (504)
Q Consensus 359 ~~~~~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iw--d~~~~~~ 429 (504)
+.+++.....+ ..|.+||....... .+ ......+..+.. +|++.|+..+.. +...|| ++..+..
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~-~l-----T~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCT-FI-----TKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCE-ES-----CCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceE-ec-----ccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 96442343344 46777887653221 11 122334444432 446655544432 334454 4443322
Q ss_pred ceeecc--cCCCCceeEEEECCCCCEEEEeeCC---CcEEEEEcCCcceEEEEe
Q psy17188 430 RIKAEL--TSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 430 ~~~~~~--~~~~~~v~~l~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~ 478 (504)
...... ...........|+|++++++..... ..+.+++..+++.+..+.
T Consensus 404 ~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp EEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred ceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 111111 1223457788999999988755433 468888888776655443
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=6.9e-23 Score=189.90 Aligned_cols=280 Identities=16% Similarity=0.153 Sum_probs=194.2
Q ss_pred EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCc-CceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEee
Q psy17188 164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~ 241 (504)
.++++++++++++++.+++|++||+.+++. ...+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 346788889999999999999999987654 23333222 2467899999998665 4556889999999999988777
Q ss_pred cCCC------CCeEEEEEccCCCEEEEEcCC------------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 242 QGHT------DGASCIDISADGTKLWTGGLD------------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 242 ~~h~------~~v~~~~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
..+. ..+.+++|+|+|++|++++.+ +.|.+||+.+++... ......+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-------------~~~~~~~~~ 148 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-------------PVRTFPMPR 148 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-------------CSEEEECCS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc-------------eeeeccCCC
Confidence 6332 237889999999999998865 899999998754210 122223344
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC----------------------ceeeEEECCCCCCc
Q psy17188 304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP----------------------ACYALAISPDSKSP 361 (504)
Q Consensus 304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~----------------------~i~~~~~~~~~~~~ 361 (504)
.+.+++|+|+|+ +++++. .|.+||..+++............ ....+++++++...
T Consensus 149 ~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 225 (349)
T 1jmx_B 149 QVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 225 (349)
T ss_dssp SCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred cccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC
Confidence 688899999999 666543 49999998775333222111000 23345555543211
Q ss_pred ---------eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188 362 ---------FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 362 ---------~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~ 431 (504)
++.....++.++++++. .....+..++|+| ++++++++ ++.|.+||+.+++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 226 PATADLLYGYLSVDLKTGKTHTQEFA--------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp -CCCEEEEEEEEEETTTCCEEEEEEE--------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred ccccccceeEEEEeccCCcEEecccc--------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 11122333444554442 2345677999999 99999988 8899999999876544
Q ss_pred eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec
Q psy17188 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 480 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h 480 (504)
..... ..+..++|+||+++|++++.++.|++||+++++.+..+...
T Consensus 290 ~~~~~---~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 290 AANLD---HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEECS---SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEcCC---CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 44322 24678899999999988888999999999999998888754
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=6e-22 Score=184.45 Aligned_cols=297 Identities=13% Similarity=0.145 Sum_probs=191.3
Q ss_pred CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCC--CccceeeeecCcCce
Q psy17188 133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASP--TPRIKAELTSSAPAC 206 (504)
Q Consensus 133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~--~~~~~~~~~~~~~~v 206 (504)
++.|.+|+++.... .+..+... +...+..++|+||+++|++++.+ +.|.+|++... +.........+....
T Consensus 26 ~~~i~~~~~d~~~g--~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 26 SKGIYTFRFNEETG--ESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp CCEEEEEEEETTTC--CEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCEEEEEEeCCCC--CEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 67899998754211 12222222 56778889999999999998875 79999998753 333333344455567
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEee------c--------CCCCCeEEEEEccCCCEEEEEc-CCCeEE
Q psy17188 207 YALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQF------Q--------GHTDGASCIDISADGTKLWTGG-LDNTVR 270 (504)
Q Consensus 207 ~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~--------~h~~~v~~~~~~~~~~~l~s~~-~dg~i~ 270 (504)
..+++ ++++|++++ .++.|.+|++.....+..+ . .+...+.+++|+|+|++|++++ .++.|.
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 77888 777777766 5789999999754332221 1 1233468899999999665554 588999
Q ss_pred EEECCCCc-------eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeee
Q psy17188 271 SWDLREGC-------VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL 342 (504)
Q Consensus 271 ~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~ 342 (504)
+|++.... +.... ............+..++|+|+|+++++++ .++.|.+|++.+++.......
T Consensus 181 v~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKG---------TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEE---------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EEEEcCCCCcccccceeecc---------cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 99887543 11000 00011123345578999999999888777 589999999986543333322
Q ss_pred c---cCCCceeeEEECCCCCCceeeeccC-CCeEEEEecCCC-CCCCcccccccccCCCceEEEEEcCCCCEEEEee-CC
Q psy17188 343 T---SSAPACYALAISPDSKSPFFSSHHY-KSCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EA 416 (504)
Q Consensus 343 ~---~~~~~i~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~d 416 (504)
. .+......++|+||++. ++++... ++.|.+|++... .......... ....+..++|+|||++|++++ .+
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~-l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKY-LYASNRLKADGVAIFKVDETNGTLTKVGYQL---TGIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSE-EEEEECSSSCEEEEEEECTTTCCEEEEEEEE---CSSCCCEEEECTTSCEEEEEETTT
T ss_pred ecCCCCCCCcccEEECCCCCE-EEEECCCCCCEEEEEEEcCCCCcEEEeeEec---CCCCCceEEECCCCCEEEEEECCC
Confidence 2 22334679999999995 3344555 689999999632 1211222111 145677999999999998887 56
Q ss_pred CcEEEeeCC--CCCcceeecccCCCCceeEEEEC
Q psy17188 417 SNLSIWDLA--SPTPRIKAELTSSAPACYALAIS 448 (504)
Q Consensus 417 g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s 448 (504)
+.|.+|+++ +++..... ...+...+.|+.|.
T Consensus 328 ~~v~v~~~d~~~g~~~~~~-~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 328 NVIQIFERDQATGLLTDIK-KDIKVDKPVCLKFV 360 (361)
T ss_dssp TEEEEEEECTTTCCEEECS-CCEECSSEEEEEEE
T ss_pred CCEEEEEEECCCCcEeecc-eeeeCCCCeEEEEc
Confidence 889996554 44433221 12233457788775
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=1.3e-23 Score=208.70 Aligned_cols=261 Identities=11% Similarity=0.096 Sum_probs=188.5
Q ss_pred cCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCC--
Q psy17188 203 APACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLRE-- 276 (504)
Q Consensus 203 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~-- 276 (504)
..+|++++|+|||+.|++++. ||++.||++++++..+....+...+..+.|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 556999999999999999887 999999999777765544434368999999999 77777765 45455554432
Q ss_pred -CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 277 -GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
+.. . ...........+|+|+++. +++...++.+.+||+.+++...... +.. .+++|
T Consensus 100 ~g~~---------------~--~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~---~~~--~~~~~ 157 (582)
T 3o4h_A 100 PGEE---------------Q--RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR---LPG--FGFVS 157 (582)
T ss_dssp TTCC---------------E--ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE---ESS--CEEEE
T ss_pred CCcc---------------c--cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec---CCC--ceEEE
Confidence 211 1 1111222345688888753 3444455566699998774333222 222 78999
Q ss_pred CCCCCCceeeeccCC----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC--cEEEeeCCCCC
Q psy17188 355 SPDSKSPFFSSHHYK----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPT 428 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg--~i~iwd~~~~~ 428 (504)
+|||+ .++.++.+ ..|++||+..+... ....+...+..++|||||++|+++..++ .|++||+.+++
T Consensus 158 spDG~--~la~~~~~~~~~~~i~~~d~~~g~~~------~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 158 DIRGD--LIAGLGFFGGGRVSLFTSNLSSGGLR------VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEETT--EEEEEEEEETTEEEEEEEETTTCCCE------EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred CCCCC--EEEEEEEcCCCCeEEEEEcCCCCCce------EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 99999 55555544 77999998765432 1234567789999999999999888888 89999999876
Q ss_pred cceeecccCCCCceeEEE--------ECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188 429 PRIKAELTSSAPACYALA--------ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 429 ~~~~~~~~~~~~~v~~l~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
.. ....+...+..++ |+|||.++++++.|+.+++|++ ++.+. .+.+.+.+++|+ |++++++++
T Consensus 230 ~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 230 VE---DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EE---ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred EE---EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEc
Confidence 54 3445555566666 9999999999999999999999 66554 345678999999 999999988
Q ss_pred CCC
Q psy17188 501 LDN 503 (504)
Q Consensus 501 ~Dg 503 (504)
.+.
T Consensus 301 ~~~ 303 (582)
T 3o4h_A 301 SLS 303 (582)
T ss_dssp ETT
T ss_pred CCC
Confidence 765
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.8e-22 Score=190.05 Aligned_cols=261 Identities=11% Similarity=0.042 Sum_probs=175.3
Q ss_pred CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--------cce-----eeee
Q psy17188 134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--------RIK-----AELT 200 (504)
Q Consensus 134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--------~~~-----~~~~ 200 (504)
+.+++|+.... .....++.+++++++.++++++.++ +++|+...... ... ....
T Consensus 23 ~~vri~~~~~~------------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (434)
T 2oit_A 23 KKVRIFDSPEE------------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV 89 (434)
T ss_dssp CEEECSCCCSS------------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE
T ss_pred eeEEecCCccc------------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc
Confidence 57888874210 1234578999999999999998887 88887531100 000 0112
Q ss_pred cCcCceEEEEECCCCCEEE----EEeCCCcEEEEECCCC-----------eEEEeecCCCCCeEEEEEccC-CCEEEEEc
Q psy17188 201 SSAPACYALAISPDSKVCF----SCCSDGNIAVWDLHNQ-----------TLVRQFQGHTDGASCIDISAD-GTKLWTGG 264 (504)
Q Consensus 201 ~~~~~v~~~~~s~~~~~l~----~~~~dg~i~iwd~~~~-----------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~ 264 (504)
.+...|.+++|+|++++|+ +++.|+.|++||++++ ..+..+.+|...|.+++|+|+ +++|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3456799999999999999 7888999999998754 125667789999999999997 78999999
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec-
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT- 343 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~- 343 (504)
.||+|++||++++.. ......|...+.+++|+|+|++|++++.||.|++||.+ ++........
T Consensus 170 ~Dg~v~iwD~~~~~~---------------~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~ 233 (434)
T 2oit_A 170 ADGSIAVLQVTETVK---------------VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP 233 (434)
T ss_dssp TTSCEEEEEESSSEE---------------EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT
T ss_pred CCCeEEEEEcCCCcc---------------eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc
Confidence 999999999998753 22233467789999999999999999999999999998 3222211111
Q ss_pred ----cCCCceeeEEECCCCCCceeeeccCC------CeEEEEecCCCCCCCcc--cccccc-----cCCCceEEEEEcCC
Q psy17188 344 ----SSAPACYALAISPDSKSPFFSSHHYK------SCVKVWDISQPGSKTPV--SQLDCL-----QRDNYIRSVKLLPD 406 (504)
Q Consensus 344 ----~~~~~i~~~~~~~~~~~~~~~~~~~~------~~i~i~d~~~~~~~~~~--~~~~~~-----~~~~~i~~~~~s~~ 406 (504)
.|...+.+++|++++.. +++....+ ..+++|+++........ ...... ....+-..+..-++
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~-l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~d 312 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVF-AIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEE 312 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEE-EEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGG
T ss_pred ccCCCCceeEEEEEEecCceE-EEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhcc
Confidence 12347899999987752 22223233 24999999865322111 111100 11222223444467
Q ss_pred CCEEEEeeC-CCcEEEeeC
Q psy17188 407 GRTLIVGGE-ASNLSIWDL 424 (504)
Q Consensus 407 g~~l~~~~~-dg~i~iwd~ 424 (504)
.+++++++. .+.|.++..
T Consensus 313 w~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 313 WDLVLAASAASTEVSILAR 331 (434)
T ss_dssp GTEEEEEETTCSBCEEEEE
T ss_pred CCEEEEecCCCCceeEEEe
Confidence 677666544 344555553
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=7.3e-23 Score=203.19 Aligned_cols=270 Identities=12% Similarity=0.070 Sum_probs=194.7
Q ss_pred CCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCC-CceEEEEEccCCCEEEEecC---CCcEEE
Q psy17188 112 HGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVGGE---ASNLSI 185 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~i 185 (504)
+..+|.+++|+|||+.||+++ |++++||+++++. ... ...+. ..+.+++|+|| +.+++++. +....+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~----~~~--lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE----TVK--LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE----EEE--CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC----cEe--eecccccccccccCCCC-eEEEEeccCCCCcceEE
Confidence 356799999999999999766 8999999985532 122 22444 68999999999 77776654 455566
Q ss_pred EeCCC--CCccceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188 186 WDLAS--PTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT 262 (504)
Q Consensus 186 w~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 262 (504)
|.+.. .... . .+.... .+...+|+|+++ .+++...++.+.+||+.+++.......+. .+++|+|||++|++
T Consensus 93 ~~~~~~~~g~~-~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~ 166 (582)
T 3o4h_A 93 FKVNTSRPGEE-Q-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAG 166 (582)
T ss_dssp EEEETTSTTCC-E-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEE
T ss_pred EEEeccCCCcc-c-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEE
Confidence 55543 2211 1 222222 234568888876 33344445556699999988766555333 78999999999998
Q ss_pred EcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCc
Q psy17188 263 GGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTP 336 (504)
Q Consensus 263 ~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~ 336 (504)
++.| +.|++||+.+++.+ ....+...+..++|+|||+.|+++..++ .|++||+.+++.
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~----------------~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLR----------------VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCE----------------EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred EEEcCCCCeEEEEEcCCCCCce----------------EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 8877 78999999988742 3345567789999999999999888888 899999988754
Q ss_pred cceeeeccCCCceeeEE--------ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188 337 RIKAELTSSAPACYALA--------ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 408 (504)
Q Consensus 337 ~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 408 (504)
. .+..+...+..++ |+||+. ++++++.++.+++|++ +.... .....+.+++|+ +++
T Consensus 231 ~---~~~~~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~--g~~~~--------~~~~~v~~~~~s-dg~ 294 (582)
T 3o4h_A 231 E---DLELPSKDFSSYRPTAITWLGYLPDGR--LAVVARREGRSAVFID--GERVE--------APQGNHGRVVLW-RGK 294 (582)
T ss_dssp E---ECCCSCSHHHHHCCSEEEEEEECTTSC--EEEEEEETTEEEEEET--TEEEC--------CCSSEEEEEEEE-TTE
T ss_pred E---EccCCCcChhhhhhccccceeEcCCCc--EEEEEEcCCcEEEEEE--CCeec--------cCCCceEEEEec-CCE
Confidence 3 4555666677677 999994 8888899999999998 21111 123568899999 999
Q ss_pred EEEEeeCCCc---EEEeeCCC
Q psy17188 409 TLIVGGEASN---LSIWDLAS 426 (504)
Q Consensus 409 ~l~~~~~dg~---i~iwd~~~ 426 (504)
++++++.+.. +++||..+
T Consensus 295 ~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 295 LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEETTEEEEEEEETTCC
T ss_pred EEEEEcCCCCCCeEEEEcCCC
Confidence 9988877754 77777653
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=3.7e-22 Score=189.24 Aligned_cols=213 Identities=17% Similarity=0.135 Sum_probs=156.8
Q ss_pred CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCC-------CCCce---eeeeecCCCCceEEEEEccCCCEEE----EecC
Q psy17188 114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPG-------SKTPV---SQLDCLQRDNYIRSVKLLPDGRTLI----VGGE 179 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~-------~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~----~~~~ 179 (504)
..+..+++++++.++++++...+++|+..... ....+ .......+...|.+++|+|++++|+ +++.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 45788999999999998883349998753210 00111 1111224567899999999999999 7889
Q ss_pred CCcEEEEeCCCC-----Cc-c---ceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188 180 ASNLSIWDLASP-----TP-R---IKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 249 (504)
Q Consensus 180 dg~i~iw~~~~~-----~~-~---~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 249 (504)
|+.|+|||+.+. +. + ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|...|.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 999999998653 11 1 13445678999999999997 78999999999999999999987777777999999
Q ss_pred EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCC----
Q psy17188 250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS---- 324 (504)
Q Consensus 250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg---- 324 (504)
+++|+|+|++|++++.||+|++||++.......... ......+...+.+++|++++.++++. ..+|
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCP---------PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCC---------TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCC---------cccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 999999999999999999999999983222111100 00001233479999999988777553 3343
Q ss_pred --cEEEEeCCCCC
Q psy17188 325 --NLSIWDLASPT 335 (504)
Q Consensus 325 --~i~v~d~~~~~ 335 (504)
.+++|++.+..
T Consensus 268 ~~~v~i~~l~~~~ 280 (434)
T 2oit_A 268 SPDVVMALLPKKE 280 (434)
T ss_dssp CCEEEEEECCCTT
T ss_pred CCceEEEEeccCC
Confidence 38999998653
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=3.2e-22 Score=185.39 Aligned_cols=299 Identities=16% Similarity=0.201 Sum_probs=182.2
Q ss_pred EEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccc
Q psy17188 118 AVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRI 195 (504)
Q Consensus 118 ~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~ 195 (504)
.++++++++++++++ ++.|++||..+++. ...+.. +....+..++|+|++++++ +...++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV---YKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE---EEEEEC-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE---EEEEec-CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 456788888888877 99999999987532 222221 2222578999999998665 45578999999998765432
Q ss_pred eeeeecC----cCceEEEEECCCCCEEEEEeCC------------CcEEEEECCCCe---EEEeecCCCCCeEEEEEccC
Q psy17188 196 KAELTSS----APACYALAISPDSKVCFSCCSD------------GNIAVWDLHNQT---LVRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 196 ~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~ 256 (504)
....... ...+..++|+|++++|++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 2222111 2236789999999999998865 899999998843 333344 4446889999999
Q ss_pred CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC-------cccceeccc---CCceEEEEEcCCCCEEEEEeCCC-c
Q psy17188 257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP-------VSQLDCLQR---DNYIRSVKLLPDGRTLIVGGEAS-N 325 (504)
Q Consensus 257 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg-~ 325 (504)
++ +++++. .|.+||+.+++... .+.......+ ......... ......+++++++.......... .
T Consensus 159 g~-l~~~~~--~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 159 GS-LYVAGP--DIYKMDVKTGKYTV-ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp SC-EEEESS--SEEEECTTTCCEEE-EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred Cc-EEEccC--cEEEEeCCCCceec-cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 99 666544 49999999887532 1111100000 000000000 00234566665542111000000 1
Q ss_pred EEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188 326 LSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 404 (504)
Q Consensus 326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s 404 (504)
+..++..+++. ...........+..++++| +++. ++++ ++.|.+||+.+......+ .....+..++|+
T Consensus 235 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~dg~~--l~~~--~~~v~~~d~~~~~~~~~~------~~~~~~~~~~~s 303 (349)
T 1jmx_B 235 YLSVDLKTGKT-HTQEFADLTELYFTGLRSPKDPNQ--IYGV--LNRLAKYDLKQRKLIKAA------NLDHTYYCVAFD 303 (349)
T ss_dssp EEEEETTTCCE-EEEEEEECSSCEEEEEECSSCTTE--EEEE--ESEEEEEETTTTEEEEEE------ECSSCCCEEEEC
T ss_pred EEEEeccCCcE-EecccccCCCcceeeEecCCCCCE--EEEE--cCeEEEEECccCeEEEEE------cCCCCccceEEC
Confidence 11234433321 1112222445788999999 9884 4444 889999998764322111 123446799999
Q ss_pred CCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188 405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELT 436 (504)
Q Consensus 405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 436 (504)
|+|++|++++.++.|++||+++++.+......
T Consensus 304 ~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 304 KKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99999998888999999999887655544443
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=1.1e-21 Score=199.73 Aligned_cols=324 Identities=11% Similarity=0.077 Sum_probs=207.3
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCc-----eEEEEECCCCCEEEEEeCC---------C
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA-----CYALAISPDSKVCFSCCSD---------G 225 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~d---------g 225 (504)
....+++|+||+++++++ |++|++||+.+++.. ..+..|... ...+.|||||++|+.++.+ +
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS--VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE--EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceE--EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 346689999999988886 899999999987743 334554422 2347899999999998876 5
Q ss_pred cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC---
Q psy17188 226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD--- 302 (504)
Q Consensus 226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (504)
.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. |+.|++|++.+++....... +.. .....++.
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~--g~~----~~~~~g~~~~v 164 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT--GKE----DIIYNGITDWV 164 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC--CBT----TTEEESBCCHH
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC--CCc----cceecCccccc
Confidence 6779999999865 4666888999999999999999885 78999999988874422110 000 00000111
Q ss_pred ------CceEEEEEcCCCCEEEEEeCCC------------------------------------cEEEEeCCC---CCcc
Q psy17188 303 ------NYIRSVKLLPDGRTLIVGGEAS------------------------------------NLSIWDLAS---PTPR 337 (504)
Q Consensus 303 ------~~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~v~d~~~---~~~~ 337 (504)
.....+.|||||+.|+..+.|. .|++||+.+ ++..
T Consensus 165 ~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 165 YEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC
T ss_pred ccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc
Confidence 2234689999999999875321 478889887 5321
Q ss_pred ceeeec------cCCCceeeEEECCCCCCceeeec--cCCCeEEEEecCCCC----CCCcccccccccCCCceE-----E
Q psy17188 338 IKAELT------SSAPACYALAISPDSKSPFFSSH--HYKSCVKVWDISQPG----SKTPVSQLDCLQRDNYIR-----S 400 (504)
Q Consensus 338 ~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~--~~~~~i~i~d~~~~~----~~~~~~~~~~~~~~~~i~-----~ 400 (504)
....+. .+...+..++|+||++..++... ..+..|.+||+.++. ... ...+....+...+. .
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~-~~~l~~~~~~~~v~~~~~~~ 323 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV-ARQHIEMSTTGWVGRFRPSE 323 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG-GGCEEEECSSSCSSSSSCCC
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE-EEEeeeccCCceEccCcCCC
Confidence 222222 26667899999999984222322 234579999998764 111 11111122333333 6
Q ss_pred EEEcCCCCEEE-EeeC-CC--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEE-eeC----CCcEEE--EEcC
Q psy17188 401 VKLLPDGRTLI-VGGE-AS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-CCS----DGNIAV--WDLH 469 (504)
Q Consensus 401 ~~~s~~g~~l~-~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s-~~~----dg~i~i--wd~~ 469 (504)
.+|+|||+.|+ ..+. +| .|++||+.+++...+. .....+..+.. +|++.|+. +.. .+...| .++.
T Consensus 324 p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT---~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~ 399 (740)
T 4a5s_A 324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT---KGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLI 399 (740)
T ss_dssp CEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC---CSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETT
T ss_pred ceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc---cCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECC
Confidence 88999999877 5553 33 5888898876544322 22334544432 34665554 433 233444 4555
Q ss_pred CcceEEEEee----cCCceEEEEEccCCCEEEEec
Q psy17188 470 NQTLVRQFQG----HTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 470 ~~~~~~~~~~----h~~~v~~~~~s~d~~~l~s~s 500 (504)
.++....+.. .......+.|+||+++++...
T Consensus 400 g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 400 DYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred CCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 4443323331 235688999999999876543
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.90 E-value=7.9e-22 Score=182.54 Aligned_cols=299 Identities=14% Similarity=0.137 Sum_probs=196.0
Q ss_pred CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----------CCcEEEEeCCCCCccceeeeec-
Q psy17188 133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTS- 201 (504)
Q Consensus 133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~- 201 (504)
|+.|.+||..+++. +..+. .+..+ .++|+||+++|+++.. ++.|.+||..+.+......+..
T Consensus 30 d~~v~v~D~~t~~~---~~~i~--~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 30 ESRVHVYDYTNGKF---LGMVP--TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GCEEEEEETTTCCE---EEEEE--CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred cCeEEEEECCCCeE---EEEec--CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 67999999877643 22222 23333 8999999999999862 5679999998765432222211
Q ss_pred ---CcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEEC
Q psy17188 202 ---SAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 202 ---~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~ 274 (504)
+......++|+|||++|+++.. ++.|.+||+++++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+.
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 1233567899999999998864 57899999999999888 653 2 22335677765 67888899999999998
Q ss_pred CC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188 275 RE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353 (504)
Q Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~ 353 (504)
.. ++... ..... ...........+.+++++..++..+.++.+.++|+........
T Consensus 181 ~~~g~~~~-~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~-------------- 236 (361)
T 2oiz_A 181 GEDGKVAS-QSRSK---------QMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVD-------------- 236 (361)
T ss_dssp CTTSSEEE-EEECC---------CCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEE--------------
T ss_pred CCCCcEee-ecccc---------ceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceec--------------
Confidence 65 44321 00000 0000011111223356677777777888999999865421111
Q ss_pred ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-----------CCcEEEe
Q psy17188 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----------ASNLSIW 422 (504)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-----------dg~i~iw 422 (504)
..|++.... ...... .......++|+|+++.++++.. .+.|.+|
T Consensus 237 -------------------~~~~~~~~~----~~~~~~--~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 237 -------------------GPWSLLNDE----DKAKNW--VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp -------------------EEEESCCHH----HHHTTC--EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred -------------------ccccccCcc----cccccc--ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 111110000 000000 0000113688999888877643 3479999
Q ss_pred eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc--ceEEEEeecCCceEEEEEccCCC
Q psy17188 423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISADGT 494 (504)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~s~d~~ 494 (504)
|+.+.+.+..... +. +..++|+|||++|++++. +.|.+||..++ +++.++..+......++++|||+
T Consensus 292 D~~t~~~v~~i~~--~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 292 DTKTKQRVARIPG--RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTTTEEEEEEEC--TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcEEEEEec--CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9998765544443 33 788899999999998887 99999999999 99988866777889999999986
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=2.2e-21 Score=182.63 Aligned_cols=283 Identities=14% Similarity=0.078 Sum_probs=190.7
Q ss_pred eeeeecCcCceEE-----EEECCCCCEEEEEeC-CC--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188 196 KAELTSSAPACYA-----LAISPDSKVCFSCCS-DG--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 267 (504)
Q Consensus 196 ~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 267 (504)
...+..+...... .+|+|||++|+.++. ++ .|.+||+.+++......++...+..+.|+||++.|+.++.++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 3445555554554 789999999998887 66 388899999998887777766666788999999999999999
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEE--EEEcCCCCEEEEEe----------------------CC
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRS--VKLLPDGRTLIVGG----------------------EA 323 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~----------------------~d 323 (504)
.|++||+.+++.... ...+...+.. ..++++++.++... .+
T Consensus 103 ~l~~~d~~~g~~~~~---------------~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 103 NLMRVDLATLEENVV---------------YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp EEEEEETTTCCEEEE---------------EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred eEEEEECCCCcceee---------------eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 999999999875321 1112222322 33589999887432 34
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccC----CCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHY----KSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
..|.+||+.+++... +..+...+..+.|+| +++.++++.... ...|.++|....... .+........+
T Consensus 168 ~~l~~~d~~~g~~~~---l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~ 240 (388)
T 3pe7_A 168 CRLMRVDLKTGESTV---ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESC 240 (388)
T ss_dssp EEEEEEETTTCCEEE---EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEE
T ss_pred ceEEEEECCCCceEE---eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCccc
Confidence 679999998875332 333445688999999 998544444322 346777776543221 11111111357
Q ss_pred EEEEEcCCCCEEEEeeC-CC----cEEEeeCCCCCcceeecccCCCCc---eeEEEECCCCCEEEEe---------eCCC
Q psy17188 399 RSVKLLPDGRTLIVGGE-AS----NLSIWDLASPTPRIKAELTSSAPA---CYALAISPDSKVCFSC---------CSDG 461 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~---v~~l~~s~~~~~l~s~---------~~dg 461 (504)
...+|+|||+.|+..+. ++ .|++||+.+++.........+... ...+.|+|||+.|+.. ..+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 78899999997765443 22 399999998875544443331000 1123799999988854 4466
Q ss_pred cEEEEEcCCcceEEEEeecCC-----------ceEEEEEccCCCEEEEecC
Q psy17188 462 NIAVWDLHNQTLVRQFQGHTD-----------GASCIDISADGTKLWTGGL 501 (504)
Q Consensus 462 ~i~iwd~~~~~~~~~~~~h~~-----------~v~~~~~s~d~~~l~s~s~ 501 (504)
.|++||+.+++. ..+..|.. .+.+++|+|||+.|+..+.
T Consensus 321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 321 FLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred EEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 899999998765 45555665 5788999999999887764
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=2.8e-21 Score=179.93 Aligned_cols=284 Identities=11% Similarity=0.123 Sum_probs=183.5
Q ss_pred EEEEecCC--CcEEEEeCC--CCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEeecC-CC
Q psy17188 173 TLIVGGEA--SNLSIWDLA--SPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQG-HT 245 (504)
Q Consensus 173 ~l~~~~~d--g~i~iw~~~--~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~-h~ 245 (504)
+|++|+.. +.|.+|+++ +++........ .....+..++|+|++++|++++.+ .|.+|++. +++....... ..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35555542 468887764 33322121111 233457789999999999998888 99999997 7776544321 11
Q ss_pred CCeEEEEEccCCCE--EEEEc-------------CCCeEEEEECCC-CceEEEeecCCCCCCCccccee--cccCCceEE
Q psy17188 246 DGASCIDISADGTK--LWTGG-------------LDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDC--LQRDNYIRS 307 (504)
Q Consensus 246 ~~v~~~~~~~~~~~--l~s~~-------------~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~ 307 (504)
+.+.+++|+|+|++ ++++. .++.+.+|++.. +++.. .+.. ..+...+.+
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~-------------~~~~~~~~~~~~~~~ 149 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEK-------------NVQNYEYQENTGIHG 149 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEE-------------EEEEEECCTTCCEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcc-------------eEeeEEeCCCCcceE
Confidence 23566899999984 45553 689999999973 54321 1111 123467899
Q ss_pred EEEcCCCCEEEEEeC-CCcEEEEeCC-CCCccceeeec--cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188 308 VKLLPDGRTLIVGGE-ASNLSIWDLA-SPTPRIKAELT--SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK 383 (504)
Q Consensus 308 ~~~~~~~~~l~~~~~-dg~i~v~d~~-~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~ 383 (504)
++|+|+|++|+++.. ++.|++||+. +++........ .+...+..++|+|+++. ++++...++.+.+|+++.....
T Consensus 150 ~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 150 MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY-LYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCC
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE-EEEEECCCCeEEEEEEeCCCCc
Confidence 999999998887754 6789999998 55433222332 23456899999999985 3444456789999987642111
Q ss_pred Cc--ccccccc-----cCCC------ceEEEE-EcCCCCEEEEeeCCC------cEEEeeCC-CCCcceeec-ccCCCCc
Q psy17188 384 TP--VSQLDCL-----QRDN------YIRSVK-LLPDGRTLIVGGEAS------NLSIWDLA-SPTPRIKAE-LTSSAPA 441 (504)
Q Consensus 384 ~~--~~~~~~~-----~~~~------~i~~~~-~s~~g~~l~~~~~dg------~i~iwd~~-~~~~~~~~~-~~~~~~~ 441 (504)
.. ....... .+.. .+..++ |+|||++|++++.+. .|.+|++. +++...... ...+...
T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 229 PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred EEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence 10 0111111 1121 578999 999999988776432 79999996 444332111 2223334
Q ss_pred eeEEEECC---CCCEEEEeeCC-CcEEEEEcCCc
Q psy17188 442 CYALAISP---DSKVCFSCCSD-GNIAVWDLHNQ 471 (504)
Q Consensus 442 v~~l~~s~---~~~~l~s~~~d-g~i~iwd~~~~ 471 (504)
+..++|+| ||++|++++.+ +.|.+|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 55679999 89999998864 89999998766
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=3.8e-22 Score=187.78 Aligned_cols=282 Identities=17% Similarity=0.170 Sum_probs=187.1
Q ss_pred EEEccCCCEEEEecC-CCc--EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188 165 VKLLPDGRTLIVGGE-ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 165 ~~~s~~~~~l~~~~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 241 (504)
.+|+|||++|++++. ++. |.+||+.+++. ......+...+..+.|+||++.|+.++.++.|++||+.+++....+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY 118 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE--EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce--EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence 789999999999887 663 88889887653 3333445444556789999999999999999999999999887777
Q ss_pred cCCCCCeEEEE--EccCCCEEEEE----------------------cCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188 242 QGHTDGASCID--ISADGTKLWTG----------------------GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD 297 (504)
Q Consensus 242 ~~h~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 297 (504)
..+...+.... +++++++++.. ..+..|.+||+.+++...
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~---------------- 182 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV---------------- 182 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE----------------
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE----------------
Confidence 76666554444 48899888742 245789999999887432
Q ss_pred ecccCCceEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCC--CceeeEEECCCCCCceeeeccC
Q psy17188 298 CLQRDNYIRSVKLLP-DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSA--PACYALAISPDSKSPFFSSHHY 368 (504)
Q Consensus 298 ~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~ 368 (504)
...+...+..+.|+| +|+.|+....+ ..|.++|........ +..+. ..+..++|+||++.+++++...
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK---VKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE---SCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE---eeeCCCCcccccceECCCCCEEEEEecCC
Confidence 223455688999999 99998887653 368888876653222 22222 3577889999999755554433
Q ss_pred CC---eEEEEecCCCCCCCcccccccccCC-CceEEEEEcCCCCEEEEe---------eCCCcEEEeeCCCCCcceeecc
Q psy17188 369 KS---CVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVG---------GEASNLSIWDLASPTPRIKAEL 435 (504)
Q Consensus 369 ~~---~i~i~d~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~ 435 (504)
+. .|.+||+..+.... +.......+. ......+|+|||+.|+.. ..+..|++||+.+++.......
T Consensus 260 ~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 338 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQ-LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARH 338 (388)
T ss_dssp TCCCEEEEEECTTTCCEEE-EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEEC
T ss_pred CCCcceEEEEecCCCceEE-EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccc
Confidence 32 49999998754211 1111100000 001123799999988864 4456899999987654333222
Q ss_pred cCC--------CCceeEEEECCCCCEEEEee-CCCcEEEEEc
Q psy17188 436 TSS--------APACYALAISPDSKVCFSCC-SDGNIAVWDL 468 (504)
Q Consensus 436 ~~~--------~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~ 468 (504)
... ...+..++|+|||+.|+..+ .+|...||.+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 210 00366779999999888665 4676666654
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=5e-20 Score=171.43 Aligned_cols=277 Identities=13% Similarity=0.118 Sum_probs=177.0
Q ss_pred CeEEEEeCCCCCCCCceeeeee--cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC-CCCccceeeeecCcCceEEEE
Q psy17188 134 GCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALA 210 (504)
Q Consensus 134 ~~i~vw~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~v~~~~ 210 (504)
+.|.+|+++... ..+..+.. ......+..++|+||+++|++++.+ .|.+|++. +++.........+ ....+++
T Consensus 14 ~~i~~~~~d~~~--g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~ 89 (365)
T 1jof_A 14 GAIFTVQFDDEK--LTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRAND 89 (365)
T ss_dssp CEEEEEEEETTT--TEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGC
T ss_pred CcEEEEEEECCC--CCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEE
Confidence 578887764321 11121111 1233468899999999999998877 99999987 5543222222111 2245689
Q ss_pred ECCCCCE--EEEEe-------------CCCcEEEEECC-CCeEEEeec----CCCCCeEEEEEccCCCEEEEEcC-CCeE
Q psy17188 211 ISPDSKV--CFSCC-------------SDGNIAVWDLH-NQTLVRQFQ----GHTDGASCIDISADGTKLWTGGL-DNTV 269 (504)
Q Consensus 211 ~s~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~-dg~i 269 (504)
|+|++++ ++++. .++.+.+|++. +++....+. .+...+.+++|+|||++|+++.. ++.|
T Consensus 90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v 169 (365)
T 1jof_A 90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKL 169 (365)
T ss_dssp TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence 9999994 44553 68999999997 465544433 25567999999999998887654 6799
Q ss_pred EEEECC-CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCC--CCccc----eee
Q psy17188 270 RSWDLR-EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLAS--PTPRI----KAE 341 (504)
Q Consensus 270 ~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~--~~~~~----~~~ 341 (504)
++||+. ++++.... ......+...+..++|+|+|+++++++. ++.+.+|++.. ++... ...
T Consensus 170 ~~~~~~~~g~~~~~~-----------~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 170 WTHRKLASGEVELVG-----------SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp EEEEECTTSCEEEEE-----------EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred EEEEECCCCCEEEee-----------eEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 999998 67643210 1111112456889999999999988765 68899998753 32211 111
Q ss_pred ecc----CCC------ceeeEE-ECCCCCCceeeeccCCC-----eEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188 342 LTS----SAP------ACYALA-ISPDSKSPFFSSHHYKS-----CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP 405 (504)
Q Consensus 342 ~~~----~~~------~i~~~~-~~~~~~~~~~~~~~~~~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 405 (504)
+.. +.. .+..++ |+||++.+ +++...++ .|.+|++........... ....+...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l-~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~-~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYM-FASSRANKFELQGYIAGFKLRDCGSIEKQLF-LSPTPTSGGHSNAVSP 316 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEE-EEEEEESSTTSCCEEEEEEECTTSCEEEEEE-EEECSSCCTTCCCEEE
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEE-EEECCCCCCCCCCeEEEEEECCCCCEEEeee-eeecCCCCcccceecC
Confidence 111 111 478899 99999853 33332233 899999963222111000 0111233456789999
Q ss_pred ---CCCEEEEeeCC-CcEEEeeCCCC
Q psy17188 406 ---DGRTLIVGGEA-SNLSIWDLASP 427 (504)
Q Consensus 406 ---~g~~l~~~~~d-g~i~iwd~~~~ 427 (504)
||++|++++.+ +.|.+|+++..
T Consensus 317 ~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 317 CPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999998865 89999998754
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.87 E-value=4e-18 Score=165.39 Aligned_cols=334 Identities=14% Similarity=0.123 Sum_probs=223.8
Q ss_pred CCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeec
Q psy17188 123 NPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS 201 (504)
Q Consensus 123 ~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 201 (504)
+.+.++++.. ++.|.++|..+++.. ..+. ....+..+.|+|||+++++++.|+.|.+||+...+......+..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~---~~i~---~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIK---TVLD---TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEE---EEEE---CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEE---EEEe---CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 4455666665 899999999875332 2222 23356799999999999999999999999996222223444443
Q ss_pred CcCceEEEEEC----CCCCEEEEEeC-CCcEEEEECCCCeEEEeecCC-----------CCCeEEEEEccCCC-EEEEEc
Q psy17188 202 SAPACYALAIS----PDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGH-----------TDGASCIDISADGT-KLWTGG 264 (504)
Q Consensus 202 ~~~~v~~~~~s----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~~-~l~s~~ 264 (504)
.. ....++|+ |||+++++++. +++|.++|..+.+.+..+... ...+..+..++++. .++...
T Consensus 239 G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 239 GS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 32 35789999 69998887765 589999999999888876521 12577888888755 455566
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeee-
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL- 342 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~- 342 (504)
.+|.|.++|....+.. .............+.|+|++++++++. .++.|.++|+.+++.......
T Consensus 318 ~~g~v~~vd~~~~~~~--------------~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg 383 (567)
T 1qks_A 318 ETGKILLVDYTDLNNL--------------KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG 383 (567)
T ss_dssp TTTEEEEEETTCSSEE--------------EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEecCCCccc--------------eeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence 7799999998765321 111123344577889999999987765 578899999998754433333
Q ss_pred ccCCCceeeEE-ECCCCCCceeeeccCCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEEEeeC--
Q psy17188 343 TSSAPACYALA-ISPDSKSPFFSSHHYKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-- 415 (504)
Q Consensus 343 ~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-- 415 (504)
.....+-.... +.|++...++.....++.|.++|...... .+.+..+... ...-..+..+|++++|.+...
T Consensus 384 g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 384 GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTC
T ss_pred CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCC
Confidence 11111112333 57776543333334578999999876332 1122222211 122235778999999998763
Q ss_pred -----CCcEEEeeCCCC-----Ccc-eeec------ccCCCCceeEEEECCCCCEEEEee-----CCCcEEEEEcCCcce
Q psy17188 416 -----ASNLSIWDLASP-----TPR-IKAE------LTSSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQTL 473 (504)
Q Consensus 416 -----dg~i~iwd~~~~-----~~~-~~~~------~~~~~~~v~~l~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~ 473 (504)
.+.|.++|+.+. ... .... +......+..+.|+|+|+++..+. .++.|.|+|.+++++
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceE
Confidence 358999999866 211 1111 122345688999999999887663 378999999999999
Q ss_pred EEEEee
Q psy17188 474 VRQFQG 479 (504)
Q Consensus 474 ~~~~~~ 479 (504)
+.+++.
T Consensus 542 ~~~i~~ 547 (567)
T 1qks_A 542 KHVIKD 547 (567)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 988874
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=4.4e-20 Score=186.29 Aligned_cols=297 Identities=14% Similarity=0.119 Sum_probs=190.7
Q ss_pred cCCCcEEEEEEcCCCcEEEEe--c-CCeEEEEeCCCCCCCCceeeeeecCCCCceE---------EEEEc--cCCCE-EE
Q psy17188 111 SHGEVVCAVTISNPTKYVYTG--G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIR---------SVKLL--PDGRT-LI 175 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~--~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~ 175 (504)
+|...|..+++++++.+++.. + ++...||....++. ...+ ..+...+. ...|+ |||++ |+
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~l--~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---EESA--LPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---EEES--SCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---ccee--CCCCccccccccccCCccceeeeecCCCeEEE
Confidence 788999999999987777776 4 78899999643322 1222 23444444 55565 99998 77
Q ss_pred EecC-CCcEEEEeCC--C-CCccceeeeec-----CcCceEEEEECCCCCEEEEEeCC----------CcEEEEECCC--
Q psy17188 176 VGGE-ASNLSIWDLA--S-PTPRIKAELTS-----SAPACYALAISPDSKVCFSCCSD----------GNIAVWDLHN-- 234 (504)
Q Consensus 176 ~~~~-dg~i~iw~~~--~-~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iwd~~~-- 234 (504)
.++. +..|+++++. . ++. ..+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 7654 5667777775 2 332 23333 56678899999999999988876 5899999988
Q ss_pred ----CeEEEeec-CCCCCeEEEEEccCCCEEEEEcCC--------CeEEEEECC-CCceEEEeecCCCCCCCcccceecc
Q psy17188 235 ----QTLVRQFQ-GHTDGASCIDISADGTKLWTGGLD--------NTVRSWDLR-EGCVKVWDISQPGSKTPVSQLDCLQ 300 (504)
Q Consensus 235 ----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d--------g~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (504)
++.. .+. .+...+..++|+|||++|+.++.+ ..|++||+. ++..... ......
T Consensus 173 ~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~------------~~l~~~ 239 (662)
T 3azo_A 173 AADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT------------RTLLGG 239 (662)
T ss_dssp TTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE------------EEEEEE
T ss_pred cccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc------------EEeCCC
Confidence 5543 444 566788889999999999887755 379999998 5621100 111123
Q ss_pred cCCceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188 301 RDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378 (504)
Q Consensus 301 ~~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 378 (504)
+...+..+.|+|||++++++..++ .|.+||+.+++.. .+..+...+....|++
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~---~l~~~~~~~~~p~w~~---------------------- 294 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT---QLCRREEEFAGPLWTP---------------------- 294 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE---ESSCCSSBSSCCCCST----------------------
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee---ecccccccccCccccc----------------------
Confidence 356788999999999877887788 5666665443211 1111111111111111
Q ss_pred CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe--eCCCCCcceeecccCCCCceeEE-EECCCCCEEE
Q psy17188 379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW--DLASPTPRIKAELTSSAPACYAL-AISPDSKVCF 455 (504)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~ 455 (504)
.+..++|+|++++++++.. +.++|| |+.+++ ...+..+...+..+ +++.+.-+++
T Consensus 295 ------------------~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 295 ------------------GMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTRAVGV 352 (662)
T ss_dssp ------------------TCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTEEEEE
T ss_pred ------------------cCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCEEEEE
Confidence 1236889999999999988 999999 554443 23344455566666 4443333333
Q ss_pred EeeCCC--cEEEEEcCCcceEE
Q psy17188 456 SCCSDG--NIAVWDLHNQTLVR 475 (504)
Q Consensus 456 s~~~dg--~i~iwd~~~~~~~~ 475 (504)
+++.+. .|+++|+.+++...
T Consensus 353 ~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 353 AASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp EEETTEEEEEEEEETTTCCEEE
T ss_pred EcCCCCCCEEEEEECCCCceEE
Confidence 444454 46666777776543
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=1.1e-20 Score=178.16 Aligned_cols=287 Identities=15% Similarity=0.127 Sum_probs=183.5
Q ss_pred CceEEEEEccCCCEEEEecCC---CcEEEEeCCCCCccceeeeecCcCc-eEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQ 235 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 235 (504)
..+.+++|+|||++|+..... ..|.+||+.+++. ..+..+... ...+.|+||++.|+.++.++.|++||+.++
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA---VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE---EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE---EEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 346788999999998877543 4688889887653 222333222 233789999999999999999999999988
Q ss_pred eEEEeecCCCCCeEE-------------------EEEccCCCEEEEE-----cCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188 236 TLVRQFQGHTDGASC-------------------IDISADGTKLWTG-----GLDNTVRSWDLREGCVKVWDISQPGSKT 291 (504)
Q Consensus 236 ~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 291 (504)
+.......+...... +.|+|+++.++.. ..+..|++||+.+++...
T Consensus 113 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~---------- 182 (396)
T 3c5m_A 113 EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV---------- 182 (396)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE----------
T ss_pred CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe----------
Confidence 776665545443222 3456777665544 356689999998877432
Q ss_pred CcccceecccCCceEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188 292 PVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS 364 (504)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 364 (504)
...+...+..+.|+| +++.|+..+.+ ..|.+||+...+...... ......+..++|+|+++.++++
T Consensus 183 ------~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 183 ------IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYV 255 (396)
T ss_dssp ------EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEE
T ss_pred ------eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEE
Confidence 123455688999999 78877776543 358888887653222211 1113357789999999964444
Q ss_pred ecc-CC--CeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEee----------------CCCcEEEeeC
Q psy17188 365 SHH-YK--SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGG----------------EASNLSIWDL 424 (504)
Q Consensus 365 ~~~-~~--~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~----------------~dg~i~iwd~ 424 (504)
+.. .. +.|.+||+..+.... +.. .. ... +.|+| ||+++++++ .+..|++||+
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~-l~~-----~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPETLENEE-VMV-----MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEETTTCCEEEEEECTTTCCEEE-EEE-----CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred ecCCCCccceEEEEECCCCCeEE-eee-----CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 322 12 459999987643211 111 11 122 89999 999888754 2467999999
Q ss_pred CCCCcceeecccCCC--------CceeEEEECCCCCEEEEeeC-CCcEEE--EEcCCcceE
Q psy17188 425 ASPTPRIKAELTSSA--------PACYALAISPDSKVCFSCCS-DGNIAV--WDLHNQTLV 474 (504)
Q Consensus 425 ~~~~~~~~~~~~~~~--------~~v~~l~~s~~~~~l~s~~~-dg~i~i--wd~~~~~~~ 474 (504)
.+++........... ..+..++|+|||+.|+.++. ++...| +++.+++..
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 328 KAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp TTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred ccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 877643332211100 02455699999999887765 455444 455555443
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=1.1e-20 Score=178.22 Aligned_cols=283 Identities=11% Similarity=0.008 Sum_probs=181.4
Q ss_pred eEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188 206 CYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW 282 (504)
Q Consensus 206 v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 282 (504)
+..++|+|||++|+..... ..|.+||+.+++.......+......+.|+|||++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 5678999999988877543 3688999998887655443333333478999999999999999999999998875432
Q ss_pred eecCCCCCCCcccceecccCCce-----EEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188 283 DISQPGSKTPVSQLDCLQRDNYI-----RSVKLLPDGRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYAL 352 (504)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~-----~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~ 352 (504)
...... ..+............. ..+.|+|+++.++.. ..+..|.+||+.+++..... .+...+..+
T Consensus 118 ~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~ 193 (396)
T 3c5m_A 118 YTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHP 193 (396)
T ss_dssp EECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEE
T ss_pred Eecccc-cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccc
Confidence 211100 0000000000000000 003567888776654 35568999999876533322 345578899
Q ss_pred EECC-CCCCceeeeccCC----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEe
Q psy17188 353 AISP-DSKSPFFSSHHYK----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW 422 (504)
Q Consensus 353 ~~~~-~~~~~~~~~~~~~----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iw 422 (504)
.|+| +++.+++++.... ..|.+||+...... .+........+..++|+|||++|+..+.+ +.|++|
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 9999 7775444443222 46888887643211 11111113357789999999988776543 349999
Q ss_pred eCCCCCcceeecccCCCCceeEEEECC-CCCEEEEee----------------CCCcEEEEEcCCcceEEEEeecCC---
Q psy17188 423 DLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCC----------------SDGNIAVWDLHNQTLVRQFQGHTD--- 482 (504)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~h~~--- 482 (504)
|+.+++......... .. +.|+| |++++++++ .+..|++||+.+++. ..+..+..
T Consensus 270 d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~ 343 (396)
T 3c5m_A 270 NPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWD 343 (396)
T ss_dssp CTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCC
T ss_pred ECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccc
Confidence 998876544433322 22 79999 999888754 347899999988875 34555554
Q ss_pred --------ceEEEEEccCCCEEEEecCC
Q psy17188 483 --------GASCIDISADGTKLWTGGLD 502 (504)
Q Consensus 483 --------~v~~~~~s~d~~~l~s~s~D 502 (504)
.+..+.|+|||+.|+.++.+
T Consensus 344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 344 VLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred cccccccCCCCCceEccCCCeEEEEecC
Confidence 25678999999999887753
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1.3e-19 Score=182.85 Aligned_cols=292 Identities=11% Similarity=0.034 Sum_probs=179.8
Q ss_pred CCcceEEEECCCCCcccCC--CCCCcccCCCCCccccceeeecCCCcEE---------EEEEc--CCCcE-EEEec--CC
Q psy17188 71 GKPAYSYHVTTDGQMQPVP--FPPDALIGPGIPRHARQINTLSHGEVVC---------AVTIS--NPTKY-VYTGG--KG 134 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~s--~~~~~-l~~~~--d~ 134 (504)
...+..+++++++...... ..++...+|.............|...+. ...|+ |||+. |+.+. +.
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 4466777777554332222 1222233333222222222235555555 55555 99998 77766 45
Q ss_pred eEEEEeCC--CCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC----------CcEEEEeCCC------CCccce
Q psy17188 135 CVKVWDIS--QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------SNLSIWDLAS------PTPRIK 196 (504)
Q Consensus 135 ~i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iw~~~~------~~~~~~ 196 (504)
.|.+|++. ..+....+.......|...+.+++|+|||+.|++++.+ ..|++||+.+ ++ .
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~ 179 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---V 179 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---S
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---e
Confidence 56666654 20222222211100156788999999999999998876 5899999987 33 2
Q ss_pred eeee-cCcCceEEEEECCCCCEEEEEeCC--------CcEEEEECC-CC---eEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188 197 AELT-SSAPACYALAISPDSKVCFSCCSD--------GNIAVWDLH-NQ---TLVRQFQGHTDGASCIDISADGTKLWTG 263 (504)
Q Consensus 197 ~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 263 (504)
..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +......+|...+..+.|+|||++++++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEE
Confidence 3344 455678889999999999988755 379999999 57 5555555567889999999999988888
Q ss_pred cCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE--eCCCCCccce
Q psy17188 264 GLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW--DLASPTPRIK 339 (504)
Q Consensus 264 ~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~ 339 (504)
..++ .|.+||+.+++..... .... ......-...+..++|++++++++++.. +.+++| |+.+++ .
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l~--~~~~-----~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~---~ 328 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQLC--RREE-----EFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE---L 328 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEESS--CCSS-----BSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE---E
T ss_pred CCCCCeEEEEEECCCCceeecc--cccc-----cccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc---E
Confidence 8888 6777777666543210 0000 0000000011456899999999999988 999999 544432 3
Q ss_pred eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI 377 (504)
Q Consensus 340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 377 (504)
..+..+...+..+. +++++..++++.+.+....+|.+
T Consensus 329 ~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 329 VDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp EECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEE
T ss_pred EEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEE
Confidence 44455555565552 55666656777776665555544
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=5.2e-18 Score=155.87 Aligned_cols=270 Identities=11% Similarity=0.043 Sum_probs=189.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI 284 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 284 (504)
.+.+++|++++..++..+.++.++.| .++....+..+...+.+++|++++++++++..++.|.+||..+++...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~- 82 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF- 82 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-
Confidence 36678888888777777788899999 45666677777778899999999998888889999999999988754221
Q ss_pred cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188 285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS 360 (504)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 360 (504)
......+.+++++++|+++++...+ +.|.+||..+...............+..++++|++.
T Consensus 83 --------------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~- 147 (333)
T 2dg1_A 83 --------------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG- 147 (333)
T ss_dssp --------------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-
T ss_pred --------------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-
Confidence 1234568999999999987777666 689999988765332221122345788999999986
Q ss_pred ceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCC-CCccee
Q psy17188 361 PFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS-PTPRIK 432 (504)
Q Consensus 361 ~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~-~~~~~~ 432 (504)
++++... .+.|..+|...... ... ......+..++|+|+|+.|+++ ..++.|++||+.+ +.....
T Consensus 148 -l~v~~~~~~~~~~~~~l~~~~~~~~~~----~~~--~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~ 220 (333)
T 2dg1_A 148 -FYFTDFRGYSTNPLGGVYYVSPDFRTV----TPI--IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP 220 (333)
T ss_dssp -EEEEECCCBTTBCCEEEEEECTTSCCE----EEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE
T ss_pred -EEEEeccccccCCCceEEEEeCCCCEE----EEe--ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc
Confidence 5555443 24555555432211 111 1122346789999999866554 5578899999864 222211
Q ss_pred ------ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC------ceEEEEEccCCCEEEEec
Q psy17188 433 ------AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD------GASCIDISADGTKLWTGG 500 (504)
Q Consensus 433 ------~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~~~~s~d~~~l~s~s 500 (504)
.....+ ..+..++++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|++|++.|+.++
T Consensus 221 ~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 221 FGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp EEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred ccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 111222 45778999999998888878899999998 5777777765443 689999999988887666
Q ss_pred CC
Q psy17188 501 LD 502 (504)
Q Consensus 501 ~D 502 (504)
.+
T Consensus 299 ~~ 300 (333)
T 2dg1_A 299 ND 300 (333)
T ss_dssp EC
T ss_pred Cc
Confidence 54
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=4.8e-17 Score=145.91 Aligned_cols=247 Identities=15% Similarity=0.206 Sum_probs=172.8
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec------CCCCCeEEEEE-ccCCCEEEEEcC-CCeEEEE
Q psy17188 201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ------GHTDGASCIDI-SADGTKLWTGGL-DNTVRSW 272 (504)
Q Consensus 201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~s~~~-dg~i~~w 272 (504)
++.....+++++++++++++...++.|.+||.. ++.+..+. ++...+.++++ .++++++++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 344568899999999988888889999999987 65565553 24467899999 467766666533 8899999
Q ss_pred ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188 273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 352 (504)
Q Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~ 352 (504)
|........+ .......+..++++++|+++++...++.|.+||.... .........+...+..+
T Consensus 106 d~~g~~~~~~---------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 106 NQYGQFVRKF---------------GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp CTTSCEEEEE---------------CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEE
T ss_pred CCCCcEEEEe---------------cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEEEeCCCCccCCcEEE
Confidence 9543322111 0122345789999999998887777889999996532 22222212344568899
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC-cEEEeeCCCCCcce
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRI 431 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~i~iwd~~~~~~~~ 431 (504)
+++++++ ++++...++.|++||.... .+..+....+...+..++++++|+++++...++ .|.+||.. ++...
T Consensus 170 ~~~~~g~--l~v~~~~~~~i~~~~~~g~----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~ 242 (286)
T 1q7f_A 170 VVNDKQE--IFISDNRAHCVKVFNYEGQ----YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLIS 242 (286)
T ss_dssp EECSSSE--EEEEEGGGTEEEEEETTCC----EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEE
T ss_pred EECCCCC--EEEEECCCCEEEEEcCCCC----EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEE
Confidence 9999987 7777778999999997432 111221112235678999999999888887776 99999964 44444
Q ss_pred eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
..........+..++++|+|+++++ +.|++|++|++....
T Consensus 243 ~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 243 ALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 4433333345778999999987777 679999999986543
No 175
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2e-15 Score=136.28 Aligned_cols=286 Identities=10% Similarity=0.077 Sum_probs=198.4
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 236 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 236 (504)
.+...+.++++.++|+.+++...++.|.+||.. ++.. ......+...+.++++.+++.++++...++.|..||.....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 345678999999999988777667899999987 4422 22223345678999999999888777668889999986322
Q ss_pred EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188 237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 316 (504)
Q Consensus 237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 316 (504)
....+......+.++++.++++++++...++.|.+||. +++...+.. ......+..++++++|+.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~--------------~~~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL--------------PNKGSYPSFITLGSDNAL 154 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSCE
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC--------------CCCCCCCceEEEcCCCCE
Confidence 22222234567899999999988888777889999998 665432211 112345789999999987
Q ss_pred EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188 317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN 396 (504)
Q Consensus 317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (504)
.++...++.|..||. +++.. ..........+..+++.+++. ++++...++.|.+||. .... ..........
T Consensus 155 ~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~-~g~~----~~~~~~~~~~ 225 (299)
T 2z2n_A 155 WFTENQNNAIGRITE-SGDIT-EFKIPTPASGPVGITKGNDDA--LWFVEIIGNKIGRITT-SGEI----TEFKIPTPNA 225 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSS--EEEEETTTTEEEEECT-TCCE----EEEECSSTTC
T ss_pred EEEeCCCCEEEEEcC-CCcEE-EeeCCCCCCcceeEEECCCCC--EEEEccCCceEEEECC-CCcE----EEEECCCCCC
Confidence 777777789999998 44322 222333445678999999887 6776667889999998 3321 1111222446
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188 397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472 (504)
Q Consensus 397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 472 (504)
.+..++++++|+++++...++.|..||.. ++ ........+...+.++++ ++++++++.. .+.+..++.++++
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CceeEEECCCCCEEEeccCCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 68899999999866666577889999984 32 233333444566889999 8888777655 5668788876654
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=2.8e-17 Score=150.96 Aligned_cols=279 Identities=11% Similarity=0.059 Sum_probs=190.4
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 239 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 239 (504)
..|.++.|++++..++..+.++.++.|.- + ....+..+...+.+++|++++++++++..++.|.+||.++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---E--PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---E--EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeecccCccccc---c--eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 45778889998887877778888999932 2 234455666678999999999988888889999999999887665
Q ss_pred eecCCCCCeEEEEEccCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188 240 QFQGHTDGASCIDISADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 315 (504)
Q Consensus 240 ~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 315 (504)
....+...+.+++++++++++++...+ +.|.+||..++.....- ........+..++++|+|+
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~-------------~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII-------------EDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE-------------CSSSSCCCEEEEEECTTSC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE-------------ccCccCCcccceEECCCCC
Confidence 554567789999999999888877666 68999999887643110 0011235688999999998
Q ss_pred EEEEEeC------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-Cccc-
Q psy17188 316 TLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVS- 387 (504)
Q Consensus 316 ~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~- 387 (504)
++++... .+.|..+|..+.+... +......+..++++|+++. ++++...++.|.+||....... ....
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~i~~~~dg~~-l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTP---IIQNISVANGIALSTDEKV-LWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTSCCEEE---EEEEESSEEEEEECTTSSE-EEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred EEEEeccccccCCCceEEEEeCCCCEEEE---eecCCCcccceEECCCCCE-EEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 7776653 3456666665433221 1122235788999999875 4455566789999998642211 1110
Q ss_pred -ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC----CCCceeEEEECCCCCEEEEeeCCC
Q psy17188 388 -QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----SAPACYALAISPDSKVCFSCCSDG 461 (504)
Q Consensus 388 -~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~~~~~l~s~~~dg 461 (504)
..........+..++++++|+++++...++.|.+||.+ ++......... +...+.+++|+||++.|+.++.++
T Consensus 224 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 224 TIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred eEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 00001112467789999999988877778899999984 44333332221 122578899999988777665553
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=2.4e-17 Score=152.42 Aligned_cols=272 Identities=12% Similarity=0.108 Sum_probs=179.3
Q ss_pred CCceEEEEEccCCCEEEEec---------CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---C-
Q psy17188 159 DNYIRSVKLLPDGRTLIVGG---------EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---G- 225 (504)
Q Consensus 159 ~~~v~~~~~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g- 225 (504)
-..+...++ ||++++... .++.|++||+.+++.. .+ ..+..++|+|||+.|+..+.+ +
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 345777788 898888752 2567999999876532 22 457889999999999887754 2
Q ss_pred -cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---------------------------CeEEEEECCCC
Q psy17188 226 -NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---------------------------NTVRSWDLREG 277 (504)
Q Consensus 226 -~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~~wd~~~~ 277 (504)
.|.+||+.+++.......+ . +..+.|+||++.|+.++.+ ..|++||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 3888899888776655533 3 9999999999988887642 57889999888
Q ss_pred ce-EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCCccceeeeccCCCce
Q psy17188 278 CV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-------NLSIWDLASPTPRIKAELTSSAPAC 349 (504)
Q Consensus 278 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~v~d~~~~~~~~~~~~~~~~~~i 349 (504)
+. . .+.. . .+..+.|+|+| +++++..++ ...+|.+.+++. ..+..+ ..+
T Consensus 163 ~~~~--------------~l~~---~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~l~~~-~~~ 219 (347)
T 2gop_A 163 EVIE--------------EFEK---P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE---EKMFEK-VSF 219 (347)
T ss_dssp EEEE--------------EEEE---E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE---EEEEEE-ESE
T ss_pred eEEe--------------eecC---C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce---EEeccC-cce
Confidence 64 2 1211 2 57789999999 777775542 334444433322 122222 334
Q ss_pred eeEEECCCCCCceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCceEE-EEEcCCCCEEEEeeCCCcEEEe
Q psy17188 350 YALAISPDSKSPFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEASNLSIW 422 (504)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~dg~i~iw 422 (504)
..+ +|+++.+++.+... ...|.+|| .+ ....+ ...+...+.. +.|+ |+ ++++++.++.++||
T Consensus 220 ~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l----~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 220 YAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGI----LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp EEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEES----STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred eeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ceEec----cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 433 89998644443322 34677887 22 11111 1133556776 8999 88 88899999999999
Q ss_pred eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE-EEEEcCCcceEEEEeecCCc
Q psy17188 423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI-AVWDLHNQTLVRQFQGHTDG 483 (504)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i-~iwd~~~~~~~~~~~~h~~~ 483 (504)
+.+++... +..+...|.+++|+| .++++++.++.. .||.+. ++ ...+..|...
T Consensus 289 -~~~g~~~~---~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 289 -IWDGEIKP---IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp -EESSSEEE---EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred -EcCCceEE---EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 87443322 223366789999999 677777777665 777776 54 4456655543
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=4.6e-17 Score=148.96 Aligned_cols=245 Identities=10% Similarity=0.065 Sum_probs=175.7
Q ss_pred CcEEEEEEcCCCcEEEEec-C------------------------CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEc
Q psy17188 114 EVVCAVTISNPTKYVYTGG-K------------------------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 168 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~-d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 168 (504)
+.+.+++++++|+++++.. + +.|.+||.+++.. +.. ....+-.....++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~---~~~-~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI---LQS-SGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE---EEE-ECTTTCSSEEEEEEC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE---Eec-cCCCccCCceEEEEC
Confidence 5789999999999999887 5 3799999876532 111 111344678999999
Q ss_pred cCCCEEEEecCCCcEEEEeCCCCCccceeee---------ecCcCceEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeE
Q psy17188 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL---------TSSAPACYALAISP-DSKVCFSCC-SDGNIAVWDLHNQTL 237 (504)
Q Consensus 169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~s~-~~~~l~~~~-~dg~i~iwd~~~~~~ 237 (504)
++|+++++...++.|++|+...... ....+ ..+......++++| ++.++++.+ .++.|++|+ .+++.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 9999888888889999999865321 12222 23444688999999 788777776 689999999 56777
Q ss_pred EEeecC----------CCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188 238 VRQFQG----------HTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR 306 (504)
Q Consensus 238 ~~~~~~----------h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 306 (504)
+..+.. +......++++|+ +.++++...++.|++||..+++... .+........+.
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~-------------~~~~~~~~~~~~ 244 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR-------------EIKHASFGRNVF 244 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-------------EECCTTTTTCEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE-------------EEeccccCCCcc
Confidence 776642 2234899999998 7777888889999999998776421 222223445677
Q ss_pred EEEEcC------CCCEEEEEeCCCcEEEEeCCCCCccceee-eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 307 SVKLLP------DGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 307 ~~~~~~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
.++++| +|+..++...+..+++||..+++...... ...+...+..++++|++. ++++...++.|++|++..
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~--lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT--VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE--EEEEESSSCCEEEEEEEE
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC--EEEEECCCCEEEEEeCCc
Confidence 888988 33322223344589999988774332211 134556788999999995 888888999999999864
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=1.1e-17 Score=154.73 Aligned_cols=269 Identities=14% Similarity=0.194 Sum_probs=178.3
Q ss_pred CCCEEEEEe------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCC
Q psy17188 214 DSKVCFSCC------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREG 277 (504)
Q Consensus 214 ~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~ 277 (504)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+||+++++++. .++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555566553 3679999999999998888876655 899999999998886 3678999999887
Q ss_pred ceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceee-eccCCCceeeEE
Q psy17188 278 CVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAE-LTSSAPACYALA 353 (504)
Q Consensus 278 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~~ 353 (504)
+... ..... ...........++++|+|++|+++.. ++.|.+||+.+.+. ... +... ....+.
T Consensus 92 ~~~~~i~~~~----------~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~~--~~~~v~ 157 (361)
T 2oiz_A 92 TFEKEISLPP----------KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAAA--GCWSVI 157 (361)
T ss_dssp CEEEEEEECT----------TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGGT--TEEEEE
T ss_pred cEEEEEEcCc----------cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecCC--CcceeE
Confidence 6421 11000 00012245678999999999999864 57899999998732 223 2221 223356
Q ss_pred ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
+.|++.. .+++.+.|+.+.+|++........... ............+.+++++..++..+.++.++++|+........
T Consensus 158 ~~p~~~~-~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~ 236 (361)
T 2oiz_A 158 PQPNRPR-SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVD 236 (361)
T ss_dssp ECTTSSS-EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEE
T ss_pred EcCCCCe-eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceec
Confidence 7777654 566777888888888764322110000 00000011111334467777777778889999999875543221
Q ss_pred eccc--C--------CCCceeEEEECCCCCEEEEeeC-----------CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188 433 AELT--S--------SAPACYALAISPDSKVCFSCCS-----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491 (504)
Q Consensus 433 ~~~~--~--------~~~~v~~l~~s~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~ 491 (504)
.... . .......++|+||++.++++.. .+.|.+||+.+++.+.++..+. +.+++|+|
T Consensus 237 ~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~sp 314 (361)
T 2oiz_A 237 GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQ 314 (361)
T ss_dssp EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEET
T ss_pred ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECC
Confidence 1100 0 0011122689999888877643 3479999999999999999877 99999999
Q ss_pred CCCEEEEecC
Q psy17188 492 DGTKLWTGGL 501 (504)
Q Consensus 492 d~~~l~s~s~ 501 (504)
||++|++++.
T Consensus 315 dg~~l~v~n~ 324 (361)
T 2oiz_A 315 QRNLMLTLDG 324 (361)
T ss_dssp TTTEEEEECS
T ss_pred CCCEEEEeCC
Confidence 9999998875
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=1.3e-16 Score=143.15 Aligned_cols=242 Identities=11% Similarity=0.160 Sum_probs=169.3
Q ss_pred CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeee----cCCCCceEEEEE-ccCCCEEEEecC-CCcEE
Q psy17188 112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDC----LQRDNYIRSVKL-LPDGRTLIVGGE-ASNLS 184 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~----~~~~~~v~~~~~-s~~~~~l~~~~~-dg~i~ 184 (504)
|-....+++++++++++++.. ++.|.+||.+. . .+..+.. ..+...+.++++ .++++++++... ++.|.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCC-c---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 445679999999999888866 89999999763 2 1222211 123457899999 467776666533 78999
Q ss_pred EEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec--CCCCCeEEEEEccCCCEEE
Q psy17188 185 IWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISADGTKLW 261 (504)
Q Consensus 185 iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 261 (504)
+||.. ++. ...+. .+...+.+++++++++++++...++.|.+||.. ++.+..+. .+...+.++++++++++++
T Consensus 104 ~~d~~-g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 104 IYNQY-GQF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EECTT-SCE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EECCC-CcE--EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 99943 332 22222 234568899999999988877778899999964 55555553 3556789999999998888
Q ss_pred EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCCcccee
Q psy17188 262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKA 340 (504)
Q Consensus 262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~ 340 (504)
+...++.|++||.....+..+ ........+..++++++|+++++...++ .|.+||... +.....
T Consensus 180 ~~~~~~~i~~~~~~g~~~~~~--------------~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~ 244 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEGQYLRQI--------------GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISAL 244 (286)
T ss_dssp EEGGGTEEEEEETTCCEEEEE--------------SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEE
T ss_pred EECCCCEEEEEcCCCCEEEEE--------------ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEE
Confidence 888899999999865433211 1111224678999999999888887775 999999643 222222
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
........+..++++|+++ ++++ +.++.|++|+...
T Consensus 245 ~~~~~~~~~~~i~~~~~g~--l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 245 ESKVKHAQCFDVALMDDGS--VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EESSCCSCEEEEEEETTTE--EEEE-ETTTEEEEEECSC
T ss_pred cccCCCCcceeEEECCCCc--EEEE-CCCCeEEEEEccc
Confidence 2222233477899999986 5666 4689999999764
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=5e-16 Score=150.76 Aligned_cols=319 Identities=13% Similarity=0.086 Sum_probs=207.0
Q ss_pred cCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCC
Q psy17188 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTD 246 (504)
Q Consensus 169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~ 246 (504)
+.+.++++...+++|.++|..+++. ...+.. ...+..+.|+||++++++++.|+.|.+||+. +++.+.++... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v--~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~ 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEI--KTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-S 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCE--EEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-S
T ss_pred CCceEEEEeCCCCeEEEEECCCCeE--EEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-C
Confidence 4455667777899999999987764 333332 2346689999999999999999999999996 88888888743 3
Q ss_pred CeEEEEEc----cCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-E
Q psy17188 247 GASCIDIS----ADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-G 320 (504)
Q Consensus 247 ~v~~~~~~----~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~ 320 (504)
....++|+ |||++++++.. ++++.++|..+.+... .+...... ... ........+..+..++++..+++ .
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~-~i~~~~~~--~~~-~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK-IQSTRGMT--YDE-QEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE-EEECCEEC--TTT-CCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE-EEeccccc--ccc-ccccCCCceEEEEEcCCCCEEEEEe
Confidence 46899999 69998877665 5899999988876431 11100000 000 00001225778888887665444 4
Q ss_pred eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE
Q psy17188 321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS 400 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (504)
..+|.|.++|....+......+. .......+.|+|+++. ++++...++.|.++|..+.+....+..-....|.+.-..
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~-~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRY-FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCE-EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred cCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCE-EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 56789999998775433333332 2335668899999996 455566788999999987643222211011233322222
Q ss_pred EEEcCCCCEEE-Eee-CCCcEEEeeCCC-------CCcceeecccCCCCceeEEEECCCCCEEEEeeC-------CCcEE
Q psy17188 401 VKLLPDGRTLI-VGG-EASNLSIWDLAS-------PTPRIKAELTSSAPACYALAISPDSKVCFSCCS-------DGNIA 464 (504)
Q Consensus 401 ~~~s~~g~~l~-~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-------dg~i~ 464 (504)
+ ++|++..+. ++. .++.|.++|..+ .+.+......+ ..-..+..+|++++|.+... ..+|.
T Consensus 395 ~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 395 F-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 2 688755554 443 468899999987 23323322222 22234588999999988663 35899
Q ss_pred EEEcCCc-----ce-EEEEe--------ecCCceEEEEEccCCCEEEEec
Q psy17188 465 VWDLHNQ-----TL-VRQFQ--------GHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 465 iwd~~~~-----~~-~~~~~--------~h~~~v~~~~~s~d~~~l~s~s 500 (504)
++|+.+. .. ...+. .....+..+.|++||+++..+.
T Consensus 472 v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~ 521 (567)
T 1qks_A 472 VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSV 521 (567)
T ss_dssp EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEE
T ss_pred EEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEe
Confidence 9999876 21 13332 1234689999999999988763
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=1.7e-16 Score=144.88 Aligned_cols=284 Identities=11% Similarity=0.052 Sum_probs=186.5
Q ss_pred CCCcEEEEeCCCCCccceeee----ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188 179 EASNLSIWDLASPTPRIKAEL----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 254 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 254 (504)
.++.|.++|.++++....... .........+.+. +++++++...++.|.+||..+++.+.++. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 478999999987654221100 0112335677774 44555566667899999999999988886 45678999999
Q ss_pred cCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe--CCCcEEEEeC
Q psy17188 255 ADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDL 331 (504)
Q Consensus 255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~ 331 (504)
++++.+++...++.|.+||+.++++.. +.... ..........+++ ++..|+++. .++.|.++|.
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~-----------~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPD-----------MDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT-----------CCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEET
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC-----------ccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEEC
Confidence 988544554489999999999987531 11100 0000113456666 345555554 4789999999
Q ss_pred CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC----------CeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188 332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK----------SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 401 (504)
Q Consensus 332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~ 401 (504)
.+.+....... ......++++++++ ++++...+ +.|.++|..+..... ... .........+
T Consensus 160 ~t~~~~~~i~~---g~~p~~i~~~~dG~--l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~---~~~-~~~g~~p~~l 230 (328)
T 3dsm_A 160 ETDKVVDELTI---GIQPTSLVMDKYNK--MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK---QFK-FKLGDWPSEV 230 (328)
T ss_dssp TTTEEEEEEEC---SSCBCCCEECTTSE--EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE---EEE-CCTTCCCEEE
T ss_pred CCCeEEEEEEc---CCCccceEEcCCCC--EEEEECCCccCCccccCCceEEEEECCCCeEEE---EEe-cCCCCCceeE
Confidence 88753333222 23457889999987 55555444 789999987643211 111 1112357899
Q ss_pred EEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-CCCEEEEe----eCCCcEEEEEcCCcceEEE
Q psy17188 402 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSC----CSDGNIAVWDLHNQTLVRQ 476 (504)
Q Consensus 402 ~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~----~~dg~i~iwd~~~~~~~~~ 476 (504)
+++|++++|+++.. .|.+||..+++................++++| +++++++. ..++.|.+||.. ++.+.+
T Consensus 231 a~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 231 QLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE 307 (328)
T ss_dssp EECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred EEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence 99999999988765 89999998776432222222245678899999 55555555 568899999998 998888
Q ss_pred EeecCCceEEEEEc
Q psy17188 477 FQGHTDGASCIDIS 490 (504)
Q Consensus 477 ~~~h~~~v~~~~~s 490 (504)
+.. ......++|-
T Consensus 308 i~~-G~~P~~~~~~ 320 (328)
T 3dsm_A 308 FYV-GIIPGAFCWK 320 (328)
T ss_dssp EEE-EESEEEEEEE
T ss_pred EEe-ccCcceEEEe
Confidence 874 3334566653
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=1.5e-16 Score=145.59 Aligned_cols=242 Identities=14% Similarity=0.078 Sum_probs=170.4
Q ss_pred CCCCeEEEEEccCCCEEEEEcCC------------------------CeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188 244 HTDGASCIDISADGTKLWTGGLD------------------------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL 299 (504)
Q Consensus 244 h~~~v~~~~~~~~~~~l~s~~~d------------------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (504)
.-+.+.+++++|+|+++++...+ ++|.+||..++++... ...
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--------------~~~ 87 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS--------------SGK 87 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE--------------ECT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec--------------cCC
Confidence 34678999999999988888777 4799999988875311 111
Q ss_pred ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee---------ccCCCceeeEEECC-CCCCceeeecc-C
Q psy17188 300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---------TSSAPACYALAISP-DSKSPFFSSHH-Y 368 (504)
Q Consensus 300 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---------~~~~~~i~~~~~~~-~~~~~~~~~~~-~ 368 (504)
.....+..++++++|+++++...++.|++||..... .....+ ..+......++++| ++. ++++.+ .
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~--lyv~d~~~ 164 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA--VFVSDGYC 164 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC--EEEEECSS
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCe--EEEEeCCC
Confidence 233468899999999988888888999999986542 122222 23344688999999 565 677765 6
Q ss_pred CCeEEEEecCCCCCCCccccccc-----ccCCCceEEEEEcCC-CCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCce
Q psy17188 369 KSCVKVWDISQPGSKTPVSQLDC-----LQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 442 (504)
Q Consensus 369 ~~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 442 (504)
++.|++|+... .....+..... ..+-.....++++|+ +.++++...++.|++|+..+++.+.......+...+
T Consensus 165 ~~~I~~~~~~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFSPSG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEECTTS-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEcCCC-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 89999999432 11111100000 011234789999998 777777778889999999877766666555666678
Q ss_pred eEEEECC------CCCEEEEeeCCCcEEEEEcCCcceEEEEe---ecCCceEEEEEccCCCEEEEecCCC
Q psy17188 443 YALAISP------DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---GHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 443 ~~l~~s~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
..++++| +++..++...+..|++|+..+++.+..+. ++...+..|+++|||+.+++...++
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 8999999 33333333345589999999999998874 5667799999999997777766654
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.78 E-value=1.4e-14 Score=130.61 Aligned_cols=283 Identities=9% Similarity=0.079 Sum_probs=198.2
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
.+...+.+++++++|+++++.. ++.|.+||.. +. +...........+.+++++++++++++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK----ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC----eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3456889999999999888877 7899999976 32 2222222345679999999999988887778889999976
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-eecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNT 268 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 268 (504)
++. ....+......+..+++.++++++++...++.|.+||. +++... ....+...+.++++.++++++++...++.
T Consensus 87 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 87 -GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp -SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred -CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 222 12222234456899999999988887777889999998 554433 23334567899999999988887777889
Q ss_pred EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188 269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA 348 (504)
Q Consensus 269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~ 348 (504)
|..||. +++...+.. ......+..++++++|+..++...++.|.+||. +++. ...........
T Consensus 164 i~~~~~-~g~~~~~~~--------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~ 226 (299)
T 2z2n_A 164 IGRITE-SGDITEFKI--------------PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKIPTPNAR 226 (299)
T ss_dssp EEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCC
T ss_pred EEEEcC-CCcEEEeeC--------------CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEECCCCCCC
Confidence 999999 666543211 122345789999999997776666789999998 5432 22223334457
Q ss_pred eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188 349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~ 427 (504)
+..+++.+++. ++++...++.|..||.. + .+...........+.++++ ++|++.++.. .+.+..++.++.
T Consensus 227 ~~~i~~~~~g~--l~v~~~~~~~i~~~d~~-g----~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 227 PHAITAGAGID--LWFTEWGANKIGRLTSN-N----IIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEEECSTTC--EEEEETTTTEEEEEETT-T----EEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred ceeEEECCCCC--EEEeccCCceEEEECCC-C----ceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 88999999987 66666678899999973 2 1222222233456889999 8888666654 567878877654
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=1.5e-16 Score=146.99 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=167.3
Q ss_pred ceEEEEECCCCCEEEEEe---------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---C--eEE
Q psy17188 205 ACYALAISPDSKVCFSCC---------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---N--TVR 270 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g--~i~ 270 (504)
.+..+.+ ||+.++... .++.|.+||+.+++... + ..+..+.|+|||++|+..+.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4566777 888777642 25679999999887543 3 568899999999999887654 3 488
Q ss_pred EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------------------------
Q psy17188 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--------------------------- 323 (504)
Q Consensus 271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------------------- 323 (504)
+||+.+++... ...... +..++|+|+|+.|+.++.+
T Consensus 89 ~~~~~~g~~~~----------------l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 89 VADLETLSSKK----------------ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp EEETTTTEEEE----------------EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred EEECCCCceEE----------------EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 88888876431 112223 8899999999998887632
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----C-eEEEEecCCCCCCCcccccccccCCCc
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----S-CVKVWDISQPGSKTPVSQLDCLQRDNY 397 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~-~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (504)
..|.+||+.+++... .+.. . .+..+.|+|++ .++.+.... . ...+|.+. .... ..+. .+ ..
T Consensus 152 ~~l~~~d~~~~~~~~--~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~~~---~~l~--~~-~~ 218 (347)
T 2gop_A 152 TTFWIFDTESEEVIE--EFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DGKE---EKMF--EK-VS 218 (347)
T ss_dssp EEEEEEETTTTEEEE--EEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TTEE---EEEE--EE-ES
T ss_pred ceEEEEECCCCeEEe--eecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CCce---EEec--cC-cc
Confidence 568999998765311 2222 2 78899999998 344332221 2 34555544 2211 1111 12 33
Q ss_pred eEEEEEcCCCCEEEEeeCC--------CcEEEeeCCCCCcceeecccCCCCceeE-EEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 398 IRSVKLLPDGRTLIVGGEA--------SNLSIWDLASPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
+..+ +|||++|+.++.+ ..|++|| +++. ......+...+.. +.|+ |+ ++++++.++.++|| +
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~--~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV--MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE--EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce--EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 4333 9999998877654 3588888 4432 2233445567776 8999 88 88999999999999 8
Q ss_pred CCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 469 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 469 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
.+++.. .+..+...|.+++|+| ..+++++.++
T Consensus 290 ~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~ 321 (347)
T 2gop_A 290 WDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETAT 321 (347)
T ss_dssp ESSSEE-EEECSSSEEEEEEESS--SEEEEEECSS
T ss_pred cCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCC
Confidence 866654 4444677899999999 6777777664
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=2.8e-16 Score=159.40 Aligned_cols=287 Identities=14% Similarity=0.090 Sum_probs=183.2
Q ss_pred cCCCEEEEecCC-----CcEEEEeCCCCCccceee----eecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Q psy17188 169 PDGRTLIVGGEA-----SNLSIWDLASPTPRIKAE----LTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHN 234 (504)
Q Consensus 169 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~ 234 (504)
|+|++++....+ +.+++.+...++...... -.++...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 777777665322 134444444333221111 112334688999999999998776543 899999999
Q ss_pred CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe----------------EEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188 235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT----------------VRSWDLREGCVKVWDISQPGSKTPVSQLDC 298 (504)
Q Consensus 235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~----------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (504)
++.+.....+ ..+..++|+|||+.|+.++.++. |++|++.+++... ......
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------~~v~~~ 228 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-----------ILCAEF 228 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-----------EEEECC
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-----------eEEecc
Confidence 9877643322 23678999999999999888765 9999998775210 001111
Q ss_pred cccCCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCC------CCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188 299 LQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLAS------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHH 367 (504)
Q Consensus 299 ~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 367 (504)
..+...+..+.|+|||++|+..+. +..|++||+.+ +.. ....+..+...+.. .|+++++.+++.+..
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNR 306 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECC
Confidence 123445778999999999988764 56899999876 321 22233333334433 588888864444432
Q ss_pred --CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc--EEEeeCCCCCcceeecccCCCCcee
Q psy17188 368 --YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN--LSIWDLASPTPRIKAELTSSAPACY 443 (504)
Q Consensus 368 --~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~ 443 (504)
....|.+||+...... ....+........+..++|++++.++++...++. |++|++.+++..... ..+...+.
T Consensus 307 ~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l--~~~~~~v~ 383 (710)
T 2xdw_A 307 HSPNYRLINIDFTDPEES-KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF--PLEVGSVV 383 (710)
T ss_dssp TCTTCEEEEEETTSCCGG-GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE--CCCSSEEE
T ss_pred CCCCCEEEEEeCCCCCcc-cceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec--CCCCceEE
Confidence 2347999998764311 1111111111236778999988888888888885 666777566543333 33466788
Q ss_pred EEEECCCCCEEEEee----CCCcEEEEEcCCcc
Q psy17188 444 ALAISPDSKVCFSCC----SDGNIAVWDLHNQT 472 (504)
Q Consensus 444 ~l~~s~~~~~l~s~~----~dg~i~iwd~~~~~ 472 (504)
.+.++|+++.++... ..+.|++||+.+++
T Consensus 384 ~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 384 GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 899999998766332 35789999998877
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=8.8e-16 Score=138.33 Aligned_cols=247 Identities=11% Similarity=0.025 Sum_probs=171.2
Q ss_pred eecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188 199 LTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG 277 (504)
Q Consensus 199 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~ 277 (504)
+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||..++
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 344455578899999998 7788888999999999887 5666667788999999999998888777899999999888
Q ss_pred ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE----e-------------CCCcEEEEeCCCCCcccee
Q psy17188 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG----G-------------EASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~v~d~~~~~~~~~~ 340 (504)
+...+.. .........+..++++|+|+++++. + ..+.|..++.. ++ ..
T Consensus 101 ~~~~~~~-----------~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~ 165 (296)
T 3e5z_A 101 EWESIAD-----------SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---LS 165 (296)
T ss_dssp CEEEEEC-----------EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---EE
T ss_pred cEEEEee-----------ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC---EE
Confidence 7543210 0001112346789999999988873 2 13456666554 22 22
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
...........++|+|+++ .+++...++.|.+|++...... .....+ ......+..++++++|+++++. ++.|
T Consensus 166 ~~~~~~~~~~gi~~s~dg~--~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGN--LLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEECCCSSEEEEEECTTSC--EEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred EeecCCCCCccEEECCCCC--EEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence 2334445678999999998 4577778899999998732221 111111 1234556789999999866665 7889
Q ss_pred EEeeCCCCCcceeecccCCCCceeEEEE-CCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188 420 SIWDLASPTPRIKAELTSSAPACYALAI-SPDSKVCFSCCSDGNIAVWDLHNQTL 473 (504)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~-s~~~~~l~s~~~dg~i~iwd~~~~~~ 473 (504)
.+||.+ ++..... ..+.. +++++| +|+++.|++++.++ +..++.++.++
T Consensus 240 ~~~~~~-g~~~~~~--~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 240 HVLTPD-GDELGRV--LTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp EEECTT-SCEEEEE--ECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred EEECCC-CCEEEEE--ECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 999986 4433333 33334 788899 68999999888764 66666666554
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=2.9e-16 Score=158.75 Aligned_cols=282 Identities=13% Similarity=0.053 Sum_probs=172.7
Q ss_pred cCCCcEEEEec-CC---eEEEEeCC--CCCCCCceeeee--ecCCCCceEEEEEccCCCEEEE-----ecCCCcEEEEeC
Q psy17188 122 SNPTKYVYTGG-KG---CVKVWDIS--QPGSKTPVSQLD--CLQRDNYIRSVKLLPDGRTLIV-----GGEASNLSIWDL 188 (504)
Q Consensus 122 s~~~~~l~~~~-d~---~i~vw~~~--~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~-----~~~dg~i~iw~~ 188 (504)
+|+|++++... ++ .-.||... .+. ...+.... ..+|...+.+++|||||++||. |+.+..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 37888887655 32 34455443 321 12121111 1134557999999999999994 445578999999
Q ss_pred CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEeecCCCCCeEEE
Q psy17188 189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN-------------IAVWDLHNQT----LVRQFQGHTDGASCI 251 (504)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~h~~~v~~~ 251 (504)
.+++......+... ....++|+|||+.|+.++.|.. |++|++.+++ ++.....|...+..+
T Consensus 155 ~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 155 DSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 98764311112111 1257899999999999988776 9999998775 454555566788999
Q ss_pred EEccCCCEEEEEcCCC----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC----C
Q psy17188 252 DISADGTKLWTGGLDN----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A 323 (504)
Q Consensus 252 ~~~~~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d 323 (504)
.|+|||++|+..+.++ .|++|+..+++.+. ...+...+....+ ++|+ ++..+. +
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------------l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL----------------LVKGVGAKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE----------------EEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE----------------eecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence 9999999988877665 67777665554321 1222333444445 5555 444433 4
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 403 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~ 403 (504)
+.|.+||+.++.......+..+ .....+..+++
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~-----------------------------------------------~~~~~l~~~~~ 327 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPE-----------------------------------------------DSSASLLSVSI 327 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECC-----------------------------------------------CSSCEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecC-----------------------------------------------CCCCeEEEEEE
Confidence 6677777765421100000000 01223446677
Q ss_pred cCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEECCCCCEEEEe----eCCCcEEEEEcCCcce
Q psy17188 404 LPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDSKVCFSC----CSDGNIAVWDLHNQTL 473 (504)
Q Consensus 404 s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~----~~dg~i~iwd~~~~~~ 473 (504)
+ ++.++++...|+..++|.+. +++......+ .....+..+.++|+++.|+.. ...++|++||+.+++.
T Consensus 328 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 328 V-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL-PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp E-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 6 66778888888887777554 2332222222 124567778899999877733 2357899999988764
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.75 E-value=1.5e-14 Score=133.75 Aligned_cols=279 Identities=10% Similarity=0.042 Sum_probs=175.3
Q ss_pred eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeee--cC
Q psy17188 135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELT--SS 202 (504)
Q Consensus 135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~--~~ 202 (504)
.|.+||..+++. +..+. ....+ .++++||+++|+++. .++.|.+||..+.+......+. ..
T Consensus 48 ~v~v~D~~t~~~---~~~i~--~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGSGSI---LGHVN--GGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCCCeE---EEEec--CCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 889999987542 22222 12222 899999999999985 3678999999876543222222 00
Q ss_pred ---cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECC
Q psy17188 203 ---APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLR 275 (504)
Q Consensus 203 ---~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~ 275 (504)
......++|+|||++|+++.. ++.|.++| .+++.+.. +.. .. ++.+.|++ +.+++.+.||.+.++|.
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~- 194 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH- 194 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-
Confidence 122457899999999998874 47899999 99998887 653 22 24455654 45677788999999999
Q ss_pred CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS 355 (504)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~ 355 (504)
+++.... .... ... ...........+.+++..++..+..+.+.+.|+..........+...........|.
T Consensus 195 ~g~~~~~-~~~~-------~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~ 265 (373)
T 2mad_H 195 AGGAAGA-GLVG-------AML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWR 265 (373)
T ss_pred CCcEEEE-Eecc-------ccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccccee
Confidence 7764311 0000 000 111111223456666655555557788999888654221111110000000001111
Q ss_pred CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCC
Q psy17188 356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLA 425 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~ 425 (504)
......++++||++.+++... .+.|.++|..
T Consensus 266 ---------------------------------------p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~ 306 (373)
T 2mad_H 266 ---------------------------------------PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL 306 (373)
T ss_pred ---------------------------------------cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence 112335778999988887653 3579999999
Q ss_pred CCCcceeecccCCCCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEE
Q psy17188 426 SPTPRIKAELTSSAPACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQF 477 (504)
Q Consensus 426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 477 (504)
+.+.+....... ....++|+|||+ +++++. .++.|.+||+.+++.+.++
T Consensus 307 t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 307 VGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 877655554433 367789999999 777776 4899999999999999884
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=5.9e-14 Score=126.56 Aligned_cols=282 Identities=12% Similarity=0.115 Sum_probs=195.4
Q ss_pred CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 236 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 236 (504)
.....+.++++.++++..++...++.|.+||.. ++.. ...+......+..+++.++++++++...++.|..||.. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 345678899999999988877778999999987 4432 22233334568999999999877776667889999988 55
Q ss_pred EE-EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188 237 LV-RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 315 (504)
Q Consensus 237 ~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 315 (504)
.. ..+......+.++++.++++++++...++.|..+|.. ++...+.. ......+..++++++++
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--------------~~~~~~~~~i~~d~~g~ 158 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--------------PNKGSYPAFITLGSDNA 158 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--------------SSTTCCEEEEEECTTSS
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--------------CCCCCCceeEEECCCCC
Confidence 43 2223344678999999999888887778899999987 65442221 11234578999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188 316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD 395 (504)
Q Consensus 316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (504)
..++...++.|..+|. +++.. ..........+..+++.+++. ++++....+.|.+|+.. +. ..........
T Consensus 159 l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~--l~v~~~~~~~i~~~~~~-g~----~~~~~~~~~~ 229 (300)
T 2qc5_A 159 LWFTENQNNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGA--LWFVEIMGNKIGRITTT-GE----ISEYDIPTPN 229 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSS--EEEEETTTTEEEEECTT-CC----EEEEECSSTT
T ss_pred EEEEecCCCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCC--EEEEccCCCEEEEEcCC-Cc----EEEEECCCCC
Confidence 6666666788999998 43322 222333445688999999886 66666667889999872 21 1111111234
Q ss_pred CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188 396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 469 (504)
..+..++++++|++.++...++.|..||.. ++ ............+.+++++++|+++++.. . .|..+|.+
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITND-NT-IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 567899999999876666667889999984 33 22333333345578889999998776655 4 67767653
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=2.9e-15 Score=134.95 Aligned_cols=237 Identities=11% Similarity=0.044 Sum_probs=166.3
Q ss_pred EEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188 237 LVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 315 (504)
Q Consensus 237 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 315 (504)
.+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+. .....+.+++++++|+
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~----------------~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM----------------HPSHHQNGHCLNKQGH 81 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE----------------SSCSSEEEEEECTTCC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE----------------CCCCCcceeeECCCCc
Confidence 3344445666788999999998 7888888999999999887 44321 2335588999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCCccceeeec--cCCCceeeEEECCCCCCceeee----cc-------------CCCeEEEEe
Q psy17188 316 TLIVGGEASNLSIWDLASPTPRIKAELT--SSAPACYALAISPDSKSPFFSS----HH-------------YKSCVKVWD 376 (504)
Q Consensus 316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~----~~-------------~~~~i~i~d 376 (504)
++++...++.|.+||..+++........ .....+..++++|+++ ++++ +. ..+.|..++
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEEC
Confidence 8877777789999999776533222111 1123467899999997 5665 22 123455554
Q ss_pred cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCc-ceeecccCCCCceeEEEECCCCCEE
Q psy17188 377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTP-RIKAELTSSAPACYALAISPDSKVC 454 (504)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~-~~~~~~~~~~~~v~~l~~s~~~~~l 454 (504)
.. ... .. ..........++|+|+++.+++.+.++.|++|++. +++. .....+..+...+..++++++|+++
T Consensus 160 ~~--g~~---~~--~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 232 (296)
T 3e5z_A 160 PD--GTL---SA--PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIW 232 (296)
T ss_dssp TT--SCE---EE--EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEE
T ss_pred CC--CCE---EE--eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEE
Confidence 43 111 11 12334556899999999998777778899999987 4433 1111112344456778999999977
Q ss_pred EEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE-ccCCCEEEEecCCC
Q psy17188 455 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI-SADGTKLWTGGLDN 503 (504)
Q Consensus 455 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-s~d~~~l~s~s~Dg 503 (504)
++. ++.|.+|+.+ ++.+..+..+.. +++++| +||++.|++++.++
T Consensus 233 v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred EEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 766 7889999986 888888887777 999999 58999999888764
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=9.8e-16 Score=155.39 Aligned_cols=266 Identities=13% Similarity=0.039 Sum_probs=174.7
Q ss_pred CCCCEEEEEeCCC-----cEEEEECCCCeEEEee------cCCCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCC
Q psy17188 213 PDSKVCFSCCSDG-----NIAVWDLHNQTLVRQF------QGHTDGASCIDISADGTKLWTGGLDN-----TVRSWDLRE 276 (504)
Q Consensus 213 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~ 276 (504)
|+|++++....++ .+.+.+...++....+ .+|...+..++|+|||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888776554322 3444444444432222 22444688999999999998765543 899999999
Q ss_pred CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCCcccee
Q psy17188 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN----------------LSIWDLASPTPRIKA 340 (504)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~v~d~~~~~~~~~~ 340 (504)
++.... ......+..++|+|||+.|+.+..++. |++|++.++......
T Consensus 161 g~~~~~----------------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 161 AKELPD----------------VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp TEEEEE----------------EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred CCCCcc----------------cccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 875311 111122567999999999999887765 999999876533222
Q ss_pred --eeccCCCceeeEEECCCCCCceeeeccC---CCeEEEEecCC------CCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188 341 --ELTSSAPACYALAISPDSKSPFFSSHHY---KSCVKVWDISQ------PGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 409 (504)
Q Consensus 341 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~------~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 409 (504)
....+...+..+.|+||++.+++.+... +..|.+||+.. +.. ....+. .+...+.. .|+|+|+.
T Consensus 225 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~l~--~~~~~~~~-~~s~dg~~ 299 (710)
T 2xdw_A 225 CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL--KWVKLI--DNFEGEYD-YVTNEGTV 299 (710)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--CCEEEE--CSSSSCEE-EEEEETTE
T ss_pred EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--ceEEee--CCCCcEEE-EEeccCCE
Confidence 2233444578899999999644444322 67899999875 211 111111 22233333 58899998
Q ss_pred EEEeeCC----CcEEEeeCCCCCcceeecccCC-C-CceeEEEECCCCCEEEEeeCCCc--EEEEEcCCcceEEEEeecC
Q psy17188 410 LIVGGEA----SNLSIWDLASPTPRIKAELTSS-A-PACYALAISPDSKVCFSCCSDGN--IAVWDLHNQTLVRQFQGHT 481 (504)
Q Consensus 410 l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~-~-~~v~~l~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~h~ 481 (504)
|+..+.. +.|.+||+.++.......+..+ . ..+..++|++++.++++...|+. |++|++.+++.+..+..+.
T Consensus 300 l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~ 379 (710)
T 2xdw_A 300 FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV 379 (710)
T ss_dssp EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS
T ss_pred EEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCC
Confidence 8776653 3599999987642111122222 2 36778899988888888888884 5667877888888888787
Q ss_pred CceEEEEEccCCCEEEEe
Q psy17188 482 DGASCIDISADGTKLWTG 499 (504)
Q Consensus 482 ~~v~~~~~s~d~~~l~s~ 499 (504)
+.+..+.++|+++.|+..
T Consensus 380 ~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 380 GSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp SEEEEEECCTTCSEEEEE
T ss_pred ceEEEEecCCCCCEEEEE
Confidence 889999999998776643
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.73 E-value=3.3e-15 Score=135.83 Aligned_cols=299 Identities=14% Similarity=0.110 Sum_probs=192.6
Q ss_pred EEEccCCCEEEEecC-----CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe----------CCCcEEE
Q psy17188 165 VKLLPDGRTLIVGGE-----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC----------SDGNIAV 229 (504)
Q Consensus 165 ~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~i 229 (504)
....|+++.+++... ++.|.++|..+.+. ...+.....+ . ++++||+++++++. .++.|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v--~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV--IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE--EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE--EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 445789999888865 57899999987664 3444433334 4 99999999888775 3678999
Q ss_pred EECCCCeEEEeecCCC-------CCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188 230 WDLHNQTLVRQFQGHT-------DGASCIDISADGTKLWTGGL--DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300 (504)
Q Consensus 230 wd~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (504)
||..+.+.+..+.... .....+.++|||++++.+.. ++.|.++|+.++++.. .+..
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~-------------tI~v-- 178 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR-------------MLDV-- 178 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE-------------EEEC--
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE-------------EEEC--
Confidence 9999999888875321 24567999999999888764 6899999999987531 1111
Q ss_pred cCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCcccee--eeccCCCcee-eEEEC-CCCCCceeeeccCCCeEEEE
Q psy17188 301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKA--ELTSSAPACY-ALAIS-PDSKSPFFSSHHYKSCVKVW 375 (504)
Q Consensus 301 ~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~--~~~~~~~~i~-~~~~~-~~~~~~~~~~~~~~~~i~i~ 375 (504)
... ...+....+.+++.+.||.+.+.++.. ++..... .+......+. ...|. ++++. ++++ .++.+.+.
T Consensus 179 -~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~-~~vs--~~g~V~v~ 252 (386)
T 3sjl_D 179 -PDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL-VWPT--YTGKIHQI 252 (386)
T ss_dssp -CSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE-EEEB--TTSEEEEE
T ss_pred -CCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE-EEEe--CCCEEEEE
Confidence 110 112222345566666777777777765 3221100 0011111221 23443 56642 3333 37899999
Q ss_pred ecCCCCC--CCcccccc-----cccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCCCCCcceeecccCC
Q psy17188 376 DISQPGS--KTPVSQLD-----CLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSS 438 (504)
Q Consensus 376 d~~~~~~--~~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~ 438 (504)
|+..... ......+. ..-.......++++++++.+++... .+.|.++|+.+.+.+.......
T Consensus 253 d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~- 331 (386)
T 3sjl_D 253 DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH- 331 (386)
T ss_dssp ECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-
T ss_pred ECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-
Confidence 9865431 11111000 0001122335788999998888653 2469999999988776665543
Q ss_pred CCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188 439 APACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD 492 (504)
Q Consensus 439 ~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d 492 (504)
.+..|++++|++ +|++.. .++.|.++|..+++.+.++.. .+..+.|.+++|
T Consensus 332 --~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 332 --EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ-LGHGPQVITTAD 384 (386)
T ss_dssp --EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC-CCSSCCEEEECC
T ss_pred --CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC-CCCCceeEECCc
Confidence 577889999997 666654 489999999999999999874 344556777776
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=4.1e-15 Score=135.73 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=174.7
Q ss_pred CCeEEEEeCCCCCCCCceee-eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE
Q psy17188 133 KGCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 211 (504)
Q Consensus 133 d~~i~vw~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (504)
++.|.+||.++++....+.. ............+.+. +++..++...++.|.+||..+++. ...+. .......+++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~--~~~i~-~~~~p~~i~~ 91 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE--VGRIT-GFTSPRYIHF 91 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE--EEEEE-CCSSEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE--EEEcC-CCCCCcEEEE
Confidence 78999999987643222210 0000122346777774 455555666678999999997764 23333 3355789999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEEee
Q psy17188 212 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVWDI 284 (504)
Q Consensus 212 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~ 284 (504)
+++++.+++...++.|.+||..+++....+.... .....+++ . +..|+.+. .++.|.++|+.++++..
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~--- 166 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD--- 166 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE---
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE---
Confidence 8888544444478999999999999887776433 14567777 3 44555444 48899999999987431
Q ss_pred cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC----------CcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------SNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
..........++++|+|+++++...+ +.|.++|..+.+......... ......+++
T Consensus 167 -------------~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~ 232 (328)
T 3dsm_A 167 -------------ELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQL 232 (328)
T ss_dssp -------------EEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEE
T ss_pred -------------EEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEE
Confidence 11122345678899999877666554 789999998764332222221 236889999
Q ss_pred CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEe----eCCCcEEEeeCCCCCc
Q psy17188 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVG----GEASNLSIWDLASPTP 429 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~----~~dg~i~iwd~~~~~~ 429 (504)
+|+++.++ ++. . .|.+||..+...... .... ........++++| ++.++++. ..++.|.+||.. ++.
T Consensus 233 ~~d~~~ly-v~~-~--~v~~~d~~t~~~~~~-~~~~--~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 233 NGTRDTLY-WIN-N--DIWRMPVEADRVPVR-PFLE--FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp CTTSCEEE-EES-S--SEEEEETTCSSCCSS-CSBC--CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred ecCCCEEE-EEc-c--EEEEEECCCCceeee-eeec--CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 99988533 332 2 888999876543211 1111 1145678999999 45555554 567899999988 665
Q ss_pred ceeec
Q psy17188 430 RIKAE 434 (504)
Q Consensus 430 ~~~~~ 434 (504)
+....
T Consensus 305 ~~~i~ 309 (328)
T 3dsm_A 305 IDEFY 309 (328)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=8.6e-15 Score=129.94 Aligned_cols=239 Identities=10% Similarity=0.029 Sum_probs=168.1
Q ss_pred cEEEEEEcCCCcEEE-Eec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188 115 VVCAVTISNPTKYVY-TGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 192 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~-~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 192 (504)
...++++++++++++ +.. ++.|.+|+..+... .... ..+...+.+++++++++++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~----~~~~-~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT----TVLP-FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECC-CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc----ceEe-eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 668899999999887 534 88999999755321 1111 12335678999999999666665 8899999987643
Q ss_pred ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188 193 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW 272 (504)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w 272 (504)
.. .........+..+++.++++++++...++.|.+|+..+.............+.+++++++++++++...++.|.+|
T Consensus 99 ~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 99 QT--VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CE--ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred Ee--eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 21 1111223568899999999877777778899999866554433333334567899999999877777778899999
Q ss_pred ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188 273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 352 (504)
Q Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~ 352 (504)
|......... .......+..++++++|+.+++...++.|.+|+....... .....+...+..+
T Consensus 177 ~~~~~~~~~~---------------~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~p~~i 239 (270)
T 1rwi_B 177 EAESNNQVVL---------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST--VLPFTGLNTPLAV 239 (270)
T ss_dssp CTTTCCEEEC---------------CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE--ECCCCSCSCEEEE
T ss_pred ecCCCceEee---------------cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce--eeccCCCCCceeE
Confidence 9887653211 1112255789999999987777777889999998664321 1122223468899
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
++++++. ++++...++.|+++++...
T Consensus 240 ~~~~~g~--l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 240 AVDSDRT--VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EECTTCC--EEEEEGGGTEEEEECCCGG
T ss_pred EECCCCC--EEEEECCCCEEEEEcCCCc
Confidence 9999986 8888888999999998653
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=8.3e-15 Score=130.05 Aligned_cols=242 Identities=10% Similarity=0.021 Sum_probs=168.8
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 205 ACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
...++++++++++++ +...++.|.+||..+.........+...+.++++.++++++++.. ++.|.+||........+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~- 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL- 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee-
Confidence 578899999998766 446788999999766554333233445788999999998666666 88999999877653211
Q ss_pred ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF 363 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 363 (504)
.......+..++++++|+.+++...++.|.+|+..+... ..........+..++++++++ ++
T Consensus 103 --------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~--l~ 164 (270)
T 1rwi_B 103 --------------PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGN--VY 164 (270)
T ss_dssp --------------CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCC--EE
T ss_pred --------------ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCC--EE
Confidence 011224578999999999777777788999997654422 111222234678899999887 77
Q ss_pred eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188 364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY 443 (504)
Q Consensus 364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 443 (504)
++...++.|.+||........ ........+..++++++|.++++...++.|.+|+........ ....+...+.
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~~~~~~~p~ 237 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVV-----LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LPFTGLNTPL 237 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEE-----CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CCCCSCSCEE
T ss_pred EEECCCCEEEEEecCCCceEe-----ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--eccCCCCCce
Confidence 777778899999976532111 011222567899999999877777778899999987543222 1222335688
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188 444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTL 473 (504)
Q Consensus 444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 473 (504)
+++++++|+++++...++.|+++++...+.
T Consensus 238 ~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 238 AVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred eEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 999999999888888899999999876654
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.71 E-value=3.4e-13 Score=121.51 Aligned_cols=281 Identities=10% Similarity=0.087 Sum_probs=194.6
Q ss_pred cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
.....+.++++.+++++.++.. ++.|.+||.. +. +..+........+.++++.++++++++...++.|..||..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR----IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc----eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 3456789999999999888876 8999999976 32 1222222334679999999999988877667889999987
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-eecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNT 268 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 268 (504)
++. ...........+.++++.++++++++...++.|..+|.. ++... .+......+.++++.+++++.++...++.
T Consensus 92 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 92 -GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp -SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 443 222333334568999999999888777668899999987 55442 23334567899999999987777777889
Q ss_pred EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188 269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA 348 (504)
Q Consensus 269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~ 348 (504)
|..+|. +++...+.. ......+..++++++|+..++....+.|.+||. +++ ............
T Consensus 169 i~~~~~-~g~~~~~~~--------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~ 231 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPL--------------PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-ISEYDIPTPNAR 231 (300)
T ss_dssp EEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCC
T ss_pred EEEECC-CCcEEEeeC--------------CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-EEEEECCCCCCC
Confidence 999998 555432211 122345789999999987777666778999998 332 222223334456
Q ss_pred eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
+..+++.+++. ++++...++.|..||.. + . ............+.+++++++|++.++.. . .|..+|.+
T Consensus 232 ~~~i~~d~~g~--l~v~~~~~~~i~~~~~~-g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 232 PHAITAGKNSE--IWFTEWGANQIGRITND-N-T---IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEEEECSTTC--EEEEETTTTEEEEECTT-S-C---EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ceEEEECCCCC--EEEeccCCCeEEEECCC-C-c---EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 88999999987 66666667899999873 2 1 11111122345577899999998666554 4 67776643
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.70 E-value=1e-14 Score=132.63 Aligned_cols=300 Identities=13% Similarity=0.127 Sum_probs=192.8
Q ss_pred EEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcE
Q psy17188 120 TISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNL 183 (504)
Q Consensus 120 ~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i 183 (504)
...|+++.+.... ++.|.+.|..+.+. +..+.. + ..+ .++++|||++|++++ .++.|
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v---~~~I~v-G-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV---IGMIDG-G-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE---EEEEEE-C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE---EEEEEC-C-CCC--cEEECCCCCEEEEEcccccccccCCCCCEE
Confidence 3457776666553 46899999987533 233322 2 223 399999999998875 35789
Q ss_pred EEEeCCCCCccceeeeec--C---cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188 184 SIWDLASPTPRIKAELTS--S---APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD 256 (504)
Q Consensus 184 ~iw~~~~~~~~~~~~~~~--~---~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 256 (504)
.+||..+.+......+.. + ......++|+|||++++++.. ++.|.++|+.+++.+.++.... . ...+...
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g 188 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTA 188 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCC
Confidence 999999876533333321 0 112456899999999888864 6889999999999999886322 1 2223334
Q ss_pred CCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCce-EEEEEc-CCCCEEEEEeCCCcEEEEeCCC
Q psy17188 257 GTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYI-RSVKLL-PDGRTLIVGGEASNLSIWDLAS 333 (504)
Q Consensus 257 ~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~-~~~~~l~~~~~dg~i~v~d~~~ 333 (504)
.+.+++.+.||.+.+.++.. +++.. .... .+. .....+ ....|. ++|++++ .+.+|.+++.|..+
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~--~~~~-------~~~--~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEI--THTE-------VFH--PEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSS 256 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEE--EECC-------CCS--CTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTT
T ss_pred CceeEEECCCCCEEEEECCCCCeEEE--eecc-------eec--cccccccccceeEcCCCcEEE-EeCCCEEEEEECCC
Confidence 56778888999999999986 55421 1100 000 001111 123554 5776555 55689999999976
Q ss_pred CCccceeeec----------cCCCceeeEEECCCCCCceeeecc--------CCCeEEEEecCCCCCCCcccccccccCC
Q psy17188 334 PTPRIKAELT----------SSAPACYALAISPDSKSPFFSSHH--------YKSCVKVWDISQPGSKTPVSQLDCLQRD 395 (504)
Q Consensus 334 ~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (504)
.......... ........++++++++.++++... ..+.|.++|+.+.+....+.. .
T Consensus 257 ~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v------g 330 (386)
T 3sjl_D 257 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------G 330 (386)
T ss_dssp SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------E
T ss_pred CcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC------C
Confidence 6433222221 112244568889998875555431 135799999887544333322 2
Q ss_pred CceEEEEEcCCCC-EEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188 396 NYIRSVKLLPDGR-TLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD 450 (504)
Q Consensus 396 ~~i~~~~~s~~g~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~ 450 (504)
..+..+++++|++ +|++.. .++.|.++|..+++.+......+|...+ .+++|
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l---~~s~d 384 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQV---ITTAD 384 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCE---EEECC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCcee---EECCc
Confidence 3577999999997 676654 4889999999999887777777765443 66665
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=1.1e-13 Score=127.94 Aligned_cols=270 Identities=13% Similarity=0.059 Sum_probs=173.2
Q ss_pred ECCCCCEEEEEeC--CC---cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECC
Q psy17188 211 ISPDSKVCFSCCS--DG---NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLR 275 (504)
Q Consensus 211 ~s~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~ 275 (504)
..|+++++++... .. .|.++|..+++.+..+.....+ .++++||+++++.+. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 4467777776653 22 7899999999998888754444 999999999998875 36789999998
Q ss_pred CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceee-eccCCCceeeE
Q psy17188 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAE-LTSSAPACYAL 352 (504)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~ 352 (504)
+.+... .+..... ...........+.++|||++|+++.. ++.|.++| .+++.. .. +... .++
T Consensus 106 t~~~~~-~i~~~~~-------~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~~----~~~ 170 (373)
T 2mad_H 106 TFLPIA-DIELPDA-------PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD--DQLLSSP----TCY 170 (373)
T ss_pred CCcEEE-EEECCCc-------cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE--eEEcCCC----ceE
Confidence 766421 1100000 00001133568999999999999874 47899999 876432 22 2211 124
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc-cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD-CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~ 431 (504)
.+.|+++. .+++.+.|+.+.++|. .+.......... ............+.+++..++..+..+.+.+.|+.+.....
T Consensus 171 ~~~~~~~~-~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 171 HIHPGAPS-TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEeCCCc-eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence 55677665 4556667899999998 543221111000 01111112235567766665555578899999987553222
Q ss_pred eeccc--C--------CCCceeEEEECCCCCEEEEeeC----------CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188 432 KAELT--S--------SAPACYALAISPDSKVCFSCCS----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491 (504)
Q Consensus 432 ~~~~~--~--------~~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~ 491 (504)
...+. . .......++++||++.+.++.. ++.|.++|+.+++.+.++.. ......++|+|
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~ 327 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQ 327 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECC
Confidence 11111 0 1122334689999998887653 35799999999999999863 34689999999
Q ss_pred CCC-EEEEec
Q psy17188 492 DGT-KLWTGG 500 (504)
Q Consensus 492 d~~-~l~s~s 500 (504)
||+ .|+++.
T Consensus 328 Dg~~~l~v~~ 337 (373)
T 2mad_H 328 DGGPDLYALS 337 (373)
T ss_pred CCCeEEEEEc
Confidence 999 777766
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.68 E-value=3.5e-14 Score=125.56 Aligned_cols=220 Identities=11% Similarity=0.146 Sum_probs=161.5
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188 214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP 292 (504)
Q Consensus 214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 292 (504)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.+.|+|++++ +.++.|..||. +++ .+|++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~------ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAA------ 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEEC------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcC------
Confidence 45689999999999999999999999998776 4789999999999888 45788999999 666 3444332
Q ss_pred cccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188 293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371 (504)
Q Consensus 293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (504)
.....+.++.+.++|+++++.+. ++.+..+|.. ++ ..
T Consensus 74 -------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk--~l-------------------------------- 111 (276)
T 3no2_A 74 -------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GE--VL-------------------------------- 111 (276)
T ss_dssp -------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SC--EE--------------------------------
T ss_pred -------CCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CC--EE--------------------------------
Confidence 11235778899999999998876 6666666542 21 11
Q ss_pred EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 451 (504)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~ 451 (504)
.-+.+.... . .+......+++.++|+++++...++.|..||.+ ++.+....... ....+.+.+++
T Consensus 112 -~~~~~~~~~-~---------~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~---~~~~~~~~~~g 176 (276)
T 3no2_A 112 -SKTEFETGI-E---------RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG---TPFSSAFLDNG 176 (276)
T ss_dssp -EEEEECCSC-S---------SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS---CCCEEEECTTS
T ss_pred -EEEeccCCC-C---------cccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC---CccceeEcCCC
Confidence 111111000 0 000112255778999999999999999999998 77766665542 34556888999
Q ss_pred CEEEEeeCCCcEEEEEcCCcceEEEEeecC------CceEEEEEccCCCEEEEec
Q psy17188 452 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHT------DGASCIDISADGTKLWTGG 500 (504)
Q Consensus 452 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~~~~s~d~~~l~s~s 500 (504)
+.++++..+++|..+|.++|+.+.++..+. ..+..+...++|+.+++..
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999888899999999999999887543 1278888999999888873
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=4.6e-15 Score=150.03 Aligned_cols=265 Identities=14% Similarity=0.045 Sum_probs=167.2
Q ss_pred CCCCCEEEEEeCCC---c--EEEEECCCCeEEEeec------CCCCCeEEEEEccCCCEEE-----EEcCCCeEEEEECC
Q psy17188 212 SPDSKVCFSCCSDG---N--IAVWDLHNQTLVRQFQ------GHTDGASCIDISADGTKLW-----TGGLDNTVRSWDLR 275 (504)
Q Consensus 212 s~~~~~l~~~~~dg---~--i~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~-----s~~~dg~i~~wd~~ 275 (504)
+|+|++++....++ . |.+.+...++....+. +|...+..++|+|||++|+ .|+.+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 36888877766543 2 4445544554333222 3555789999999999988 44455789999999
Q ss_pred CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCCcc--cee
Q psy17188 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-------------LSIWDLASPTPR--IKA 340 (504)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~v~d~~~~~~~--~~~ 340 (504)
+++... ...........++|+|||+.|+.++.+.. |++|++.++... ...
T Consensus 156 tg~~~~---------------~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 156 SGEWSK---------------VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp TCCBCS---------------SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred CCCCcC---------------CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 987310 00001111257899999999999988765 999999887533 333
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccC--CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee---C
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHY--KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG---E 415 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~---~ 415 (504)
....+...+..+.|+||++.+++.+... ...|.+++..... ...+. .+...+....+ ++|++++... .
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~ 293 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAP 293 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEEE--ECSSCCEEEEE-ETTEEEEEECTTCT
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEee--cCCCceEEEEe-cCCcEEEEECCCCC
Confidence 3344555788999999998643333322 2256666543221 11111 22334445556 5666444443 2
Q ss_pred CCcEEEeeCCCCCcc-eeecccCC-CCceeEEEECCCCCEEEEeeCCCcEEEEEcC-CcceEEEEeec-CCceEEEEEcc
Q psy17188 416 ASNLSIWDLASPTPR-IKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGH-TDGASCIDISA 491 (504)
Q Consensus 416 dg~i~iwd~~~~~~~-~~~~~~~~-~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~~~~s~ 491 (504)
++.|.+||+.++... .......+ ...+..++|+ ++.++++...|+..+||.+. +++.+..+..+ .+.+..+.++|
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~ 372 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLE 372 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCT
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCC
Confidence 578999999876531 11112222 4457788888 67788888999988888665 46666666655 56688889999
Q ss_pred CCCEEEEe
Q psy17188 492 DGTKLWTG 499 (504)
Q Consensus 492 d~~~l~s~ 499 (504)
|++.|+..
T Consensus 373 d~~~l~~~ 380 (695)
T 2bkl_A 373 DLDDAYYV 380 (695)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEE
Confidence 99877643
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.67 E-value=1.5e-14 Score=134.01 Aligned_cols=281 Identities=14% Similarity=0.120 Sum_probs=182.2
Q ss_pred CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeeecC-
Q psy17188 134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELTSS- 202 (504)
Q Consensus 134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~- 202 (504)
+.|.++|..+.+. +..+.. + ..+ .++++||+++|+++. .++.|.++|..+.+......+.+.
T Consensus 99 ~~VsVID~~t~~v---v~~I~v-G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTGRI---LGMTDG-G-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTTEE---EEEEEE-C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCCCEE---EEEEEC-C-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 7999999988533 333332 2 233 899999999998886 367899999998765433333200
Q ss_pred ----cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECC
Q psy17188 203 ----APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLR 275 (504)
Q Consensus 203 ----~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~ 275 (504)
......+.|+||+++|+++.. ++.|.+.|+.+++.+.++.... . ....|++ ..+++.+.||.+.+.+..
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 122346899999999998874 5789999999999998887422 1 2334433 566777788988888886
Q ss_pred CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS 355 (504)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~ 355 (504)
++++.... . . .+.. ........+.+.+++..++.....+.+.+.|...........
T Consensus 248 ~~~v~~~~-~-~-------~~~v-~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~-------------- 303 (426)
T 3c75_H 248 DGETKVTN-T-E-------VFHT-EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP-------------- 303 (426)
T ss_dssp TTCCEEEE-C-C-------CCSC-TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC--------------
T ss_pred CCcEEEEe-e-e-------eecc-CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee--------------
Confidence 66543210 0 0 0000 001111235678898888888888899999886542111000
Q ss_pred CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCC
Q psy17188 356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLA 425 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~ 425 (504)
|.+..... .. .. ........++++|+++++++... ++.|.++|..
T Consensus 304 -------------------~~~~~~~~---i~-~g--~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 304 -------------------IEALTEAE---RA-DD--WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp -------------------EESSCTTT---GG-GT--EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred -------------------eeeccccc---cc-cc--cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 11000000 00 00 00011114688999888777643 3469999999
Q ss_pred CCCcceeecccCCCCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEE
Q psy17188 426 SPTPRIKAELTSSAPACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQF 477 (504)
Q Consensus 426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 477 (504)
+.+.+....... ....++|+||++ ++++.. .++.|.++|+.+++.+.++
T Consensus 359 T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 359 TGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 887766665543 367789999999 888887 5899999999999999987
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=1.1e-13 Score=122.47 Aligned_cols=224 Identities=11% Similarity=0.052 Sum_probs=158.4
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCccceeeeecCc-CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CC
Q psy17188 170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DG 247 (504)
Q Consensus 170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~ 247 (504)
.+++|++++.++.|.+||.++++.. ..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV--WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE--EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE--EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 4678999999999999999877753 4444443 3578899999999888 35778999998 899999988653 57
Q ss_pred eEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcE
Q psy17188 248 ASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 326 (504)
Q Consensus 248 v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 326 (504)
+.++.+.++|+.+++.+. ++.+..+|.....+..+...... .........+++.++|+++++...++.|
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~----------~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI----------ERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC----------SSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC----------CcccccccCceECCCCCEEEEecCCCEE
Confidence 889999999999999887 78888888744433333322110 0111234456789999999999999999
Q ss_pred EEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc-cCCCceEEEEEcC
Q psy17188 327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLP 405 (504)
Q Consensus 327 ~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~ 405 (504)
..||.+ ++........ .....+...+++. +++++..++.|..+|..+++........... ..-..+..++..+
T Consensus 149 ~~~d~~-G~~~w~~~~~---~~~~~~~~~~~g~--~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLS---GTPFSSAFLDNGD--CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp EEECTT-SCEEEEEECS---SCCCEEEECTTSC--EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred EEECCC-CCEEEEEECC---CCccceeEcCCCC--EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 999987 6544433332 2456677888887 7777777888999998765443222211100 1123477888889
Q ss_pred CCCEEEEee
Q psy17188 406 DGRTLIVGG 414 (504)
Q Consensus 406 ~g~~l~~~~ 414 (504)
+|..+++..
T Consensus 223 ~G~i~v~~~ 231 (276)
T 3no2_A 223 NGGLYICNW 231 (276)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEec
Confidence 998877763
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=2.1e-14 Score=146.17 Aligned_cols=286 Identities=10% Similarity=0.055 Sum_probs=172.3
Q ss_pred ccCCCEEEEecCCCc---EEEEe--CC---CCCcccee----eeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEE
Q psy17188 168 LPDGRTLIVGGEASN---LSIWD--LA---SPTPRIKA----ELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVW 230 (504)
Q Consensus 168 s~~~~~l~~~~~dg~---i~iw~--~~---~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw 230 (504)
+|+|++++....++. -.+|. .. .++..... ...++...+..++|||||++|+.+..+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 388888887654332 44454 33 33322111 112233468899999999998877653 359999
Q ss_pred ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe--------------EEEEECCCCceEEEeecCCCCCCCcccc
Q psy17188 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT--------------VRSWDLREGCVKVWDISQPGSKTPVSQL 296 (504)
Q Consensus 231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 296 (504)
|+.+++.+.... +...+..++|+|| +.|+.++.|+. |++|++.++...- ....
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------~lv~ 261 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-----------QPVF 261 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-----------EEEE
T ss_pred ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-----------EEEe
Confidence 999998765321 2222357899999 98888877654 8888887664100 0011
Q ss_pred eecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--CC
Q psy17188 297 DCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--YK 369 (504)
Q Consensus 297 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~ 369 (504)
....+...+..+.|+|||++|+..+.++ .|++||+.++.......+..+....... ++|+++.+++.+.. .+
T Consensus 262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 262 ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTT
T ss_pred ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCC
Confidence 1112223578999999999988876543 7999998775211022233333333333 34888864444432 24
Q ss_pred CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEEC
Q psy17188 370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAIS 448 (504)
Q Consensus 370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s 448 (504)
..|.+||+.... .....+. ..+...+..++++ ++.++++...++..+||.+. ++.......+ .....+..+.++
T Consensus 341 ~~l~~~d~~~~~--~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s 415 (741)
T 1yr2_A 341 KKIVRVDLSGST--PRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGR 415 (741)
T ss_dssp CEEEEEECSSSS--CEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECC
T ss_pred CEEEEEeCCCCc--cccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecC
Confidence 669999987642 1111111 1233456677887 66778888888887766544 2332222222 234568888999
Q ss_pred CCCCEEEEe----eCCCcEEEEEcCCcc
Q psy17188 449 PDSKVCFSC----CSDGNIAVWDLHNQT 472 (504)
Q Consensus 449 ~~~~~l~s~----~~dg~i~iwd~~~~~ 472 (504)
|+++.|+.. ...++|++||+.+++
T Consensus 416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 416 PGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp BTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 998866633 235789999998876
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=2.5e-14 Score=145.69 Aligned_cols=280 Identities=14% Similarity=0.081 Sum_probs=173.3
Q ss_pred cCCCcEEEEec-C-C--eEEEEeCCC----CCCCCceeeee--ecCCCCceEEEEEccCCCEEEEecCC-----CcEEEE
Q psy17188 122 SNPTKYVYTGG-K-G--CVKVWDISQ----PGSKTPVSQLD--CLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW 186 (504)
Q Consensus 122 s~~~~~l~~~~-d-~--~i~vw~~~~----~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw 186 (504)
+|+|++++... + + .-.+|.... +.....+.... ..++...+..++|||||++||.+..+ .+|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 38899888665 3 2 355665432 22222211111 11233468899999999999987543 469999
Q ss_pred eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc--------------EEEEECCCCe----EEEeecCCCCCe
Q psy17188 187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN--------------IAVWDLHNQT----LVRQFQGHTDGA 248 (504)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~iwd~~~~~----~~~~~~~h~~~v 248 (504)
|+.+++... ...+...+..++|+|| +.|+.++.++. |++|++.++. .+.....+...+
T Consensus 195 dl~tg~~~~---~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 195 GVADGKPLA---DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp ETTTCCEEE---EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred ECCCCCCCC---ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 999876422 1112222357899999 98888877654 8999997764 333334444568
Q ss_pred EEEEEccCCCEEEEEcCCC-----eEEEEECCCC--c-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 249 SCIDISADGTKLWTGGLDN-----TVRSWDLREG--C-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 249 ~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
..+.|+|||++|+..+.++ .|++||+.++ + ... + ..+....... ++|+|+.|+..
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--------------l--~~~~~~~~~~-~~~dg~~l~~~ 333 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA--------------L--IPDLKAQWDF-VDGVGDQLWFV 333 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE--------------E--ECSSSSCEEE-EEEETTEEEEE
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE--------------e--cCCCCceEEE-EeccCCEEEEE
Confidence 8999999999888777543 8999998876 3 221 1 1112223333 34888888887
Q ss_pred eCC----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188 321 GEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN 396 (504)
Q Consensus 321 ~~d----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (504)
+.+ +.|.+||+.+........+..+...+..+++. ++. ++++...++..++|.+..... ....+. .....
T Consensus 334 s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~--lv~~~~~dg~~~l~~~~~~g~--~~~~l~-~~~~~ 407 (741)
T 1yr2_A 334 SGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR--LFASYIHDAKSQVLAFDLDGK--PAGAVS-LPGIG 407 (741)
T ss_dssp ECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE--EEEEEEETTEEEEEEEETTSC--EEEECB-CSSSC
T ss_pred ECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE--EEEEEEECCEEEEEEEeCCCC--ceeecc-CCCCe
Confidence 653 45999998764211222233444456667776 332 778888888887776653211 111111 12356
Q ss_pred ceEEEEEcCCCCEEEEe----eCCCcEEEeeCCCCC
Q psy17188 397 YIRSVKLLPDGRTLIVG----GEASNLSIWDLASPT 428 (504)
Q Consensus 397 ~i~~~~~s~~g~~l~~~----~~dg~i~iwd~~~~~ 428 (504)
.+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 408 ~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 408 SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 68889999998866633 234679999998765
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=5.8e-13 Score=120.94 Aligned_cols=249 Identities=9% Similarity=0.072 Sum_probs=163.3
Q ss_pred CcCceEEEEECCCCCEEEE-------EeCCCcEEEEECCCCeEEEeec----CCCCCeEEEEEccC-CCEEEEEcCCCeE
Q psy17188 202 SAPACYALAISPDSKVCFS-------CCSDGNIAVWDLHNQTLVRQFQ----GHTDGASCIDISAD-GTKLWTGGLDNTV 269 (504)
Q Consensus 202 ~~~~v~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~s~~~dg~i 269 (504)
......+++|++++.++++ ...++.|.+||..+++...... ++...+.+++++++ ++++++.. ++.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence 3344678999999987777 5778899999988877543222 24567899999999 65555444 4579
Q ss_pred EEEECCCCceEEE-eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCC
Q psy17188 270 RSWDLREGCVKVW-DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------------SNLSIWDLAS 333 (504)
Q Consensus 270 ~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~v~d~~~ 333 (504)
.+||.. ++...+ ... ........+.+++++++|+++++...+ +.|..|+..
T Consensus 95 ~~~d~~-g~~~~~~~~~-----------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKD-----------SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEEETT-SCEEECCSBC-----------TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEEeCC-CCEEEEEecc-----------CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 999998 765321 100 000122457899999999877776554 467777755
Q ss_pred CCccceeeeccCCCceeeEEEC----CCCCCceeeeccCCCeEEEEecCCCCCCCccccc-ccccCC-CceEEEEEcCCC
Q psy17188 334 PTPRIKAELTSSAPACYALAIS----PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL-DCLQRD-NYIRSVKLLPDG 407 (504)
Q Consensus 334 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~-~~i~~~~~s~~g 407 (504)
++.. ...........++++ ++++. ++++...++.|.+||............. ....+. ..+..++++++|
T Consensus 162 g~~~---~~~~~~~~~~~i~~~~~~d~dg~~-l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 162 GQMI---QVDTAFQFPNGIAVRHMNDGRPYQ-LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp SCEE---EEEEEESSEEEEEEEECTTSCEEE-EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CCEE---EeccCCCCcceEEEecccCCCCCE-EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence 3221 111222345788899 88863 4556567889999997621111000111 111122 457789999999
Q ss_pred CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE-EeeCCCcEEEEEcCC
Q psy17188 408 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHN 470 (504)
Q Consensus 408 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~ 470 (504)
+++++...++.|.+||.++++...... .+...+.+++|+++++.|. +...++.|..|++..
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 988887778899999988665444333 3345688999999999555 445567899999864
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=1.3e-12 Score=117.41 Aligned_cols=234 Identities=9% Similarity=0.108 Sum_probs=157.3
Q ss_pred cCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 242 QGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 242 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
..+..-..+..|+++ +.++++...++.|..||..+++...+ .....+.+++++++|+++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-----------------~~~~~~~~i~~~~dG~l~v~- 70 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-----------------TMDAPVSSVALRQSGGYVAT- 70 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-----------------ECSSCEEEEEEBTTSSEEEE-
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-----------------eCCCceEEEEECCCCCEEEE-
Confidence 334445678899995 44666667789999999998865332 22356889999999995444
Q ss_pred eCCCcEEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccC---------CCeEEEEecCCCCCCCccccc
Q psy17188 321 GEASNLSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHY---------KSCVKVWDISQPGSKTPVSQL 389 (504)
Q Consensus 321 ~~dg~i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~~~~~~~~~~~ 389 (504)
. +..|.+||.++++......... ....+..+++.|+++ ++++... ...-.+|.+........
T Consensus 71 ~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---- 143 (297)
T 3g4e_A 71 I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---- 143 (297)
T ss_dssp E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE----
T ss_pred E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEECCCCEEE----
Confidence 4 5679999988764333322211 223578899999998 4443321 12345555543221111
Q ss_pred ccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeC--CCCCcc---eeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188 390 DCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDL--ASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNI 463 (504)
Q Consensus 390 ~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~--~~~~~~---~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i 463 (504)
........+.++|+||++.|+. .+.++.|.+|++ .++... ....+.........++++++|++.++...++.|
T Consensus 144 -~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 144 -YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp -EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred -EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 1122234578999999987755 455788999987 344321 112222233457789999999988888888899
Q ss_pred EEEEcCCcceEEEEeecCCceEEEEEc-cCCCEEEEecC
Q psy17188 464 AVWDLHNQTLVRQFQGHTDGASCIDIS-ADGTKLWTGGL 501 (504)
Q Consensus 464 ~iwd~~~~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s~ 501 (504)
.+||.++++.+..+..+...+++++|. ||++.|+..+.
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 999999999999998877789999998 88887765543
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=3.2e-13 Score=123.43 Aligned_cols=186 Identities=17% Similarity=0.170 Sum_probs=136.2
Q ss_pred cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCC-----CCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188 115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGS-----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 189 (504)
.+..+++++...++++++...+++|+++.... ...+.......+.. |+.++| |+++|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 57899999999999999966788898654220 00011111124556 999999 99999999 88999999998
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV 269 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 269 (504)
+... ......+...+.++.+.+.. +++++.||.|.+||+.+++... +...|+|++|+|+| ++.|..||++
T Consensus 115 sl~~--~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 115 ELSE--FRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp STTC--EEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred hhhc--cCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 6552 34456677778888877653 8888999999999999887654 45689999999999 6789999999
Q ss_pred EEEECCCCceE-EEeecCCCCCCCcccce-ecccCCceEEEEEcCCCCEEEEE
Q psy17188 270 RSWDLREGCVK-VWDISQPGSKTPVSQLD-CLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 270 ~~wd~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
++|+...+++. ...+..+. .+. ...+...|.++.|.+++.++++=
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp------~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPS------ELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCH------HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCc------ccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99999887742 11121110 110 11356889999999999888763
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.59 E-value=1.3e-13 Score=127.76 Aligned_cols=269 Identities=13% Similarity=0.100 Sum_probs=171.4
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCC
Q psy17188 213 PDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREG 277 (504)
Q Consensus 213 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~ 277 (504)
++++.+++.... +.|.++|+.+++.+.++..-..+ .+.++||+++|+.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666666543 68999999999999999865555 899999999888776 3678999999998
Q ss_pred ceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 278 CVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 278 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
+... ..+.... ..........+.++|||++++++.. ++.|.+.|+.+.+......... +...
T Consensus 160 ~vv~~I~v~g~~---------r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~~~~ 224 (426)
T 3c75_H 160 LPIADIELPDAP---------RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------CYHI 224 (426)
T ss_dssp CEEEEEEETTCC---------CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEE
T ss_pred cEEEEEECCCcc---------ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------ceee
Confidence 7531 1110000 0001123567899999999999874 5789999999875433332211 1233
Q ss_pred CCCCCCceeeeccCCCeEEEEecCCCCCCCcc-cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~ 433 (504)
.|+++. .+++.+.|+.+.+.+.......... ..+.. ........+.+++++..++.....+.+.+.|..........
T Consensus 225 ~p~g~~-~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v-~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~ 302 (426)
T 3c75_H 225 FPASPT-VFYMNCRDGSLARVDFADGETKVTNTEVFHT-EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRA 302 (426)
T ss_dssp EEEETT-EEEEEETTSSEEEEECCTTCCEEEECCCCSC-TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECC
T ss_pred ccCCCc-EEEEEcCCCCEEEEECCCCcEEEEeeeeecc-CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEee
Confidence 444443 4444555666666666322111000 00000 00111124578999888888788899999998654322111
Q ss_pred ccc----------CCCCceeEEEECCCCCEEEEeeC----------CCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188 434 ELT----------SSAPACYALAISPDSKVCFSCCS----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG 493 (504)
Q Consensus 434 ~~~----------~~~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~ 493 (504)
... ........++++||++.+++... ++.|.++|+.+.+.+.++... .....+.|+|||
T Consensus 303 ~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg 381 (426)
T 3c75_H 303 PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDA 381 (426)
T ss_dssp CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSS
T ss_pred eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCC
Confidence 100 00111123589999988777642 357999999999999998743 358899999999
Q ss_pred C-EEEEecC
Q psy17188 494 T-KLWTGGL 501 (504)
Q Consensus 494 ~-~l~s~s~ 501 (504)
+ +|+++..
T Consensus 382 ~~~lyv~n~ 390 (426)
T 3c75_H 382 EPLLYALSA 390 (426)
T ss_dssp SCEEEEEET
T ss_pred CEEEEEEcC
Confidence 9 8888764
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1e-12 Score=119.25 Aligned_cols=240 Identities=10% Similarity=0.076 Sum_probs=154.5
Q ss_pred cceEEEECCCCCcccC-------CCCCCcccCCCCCccccceeee----cCCCcEEEEEEcCC-CcEEEEecCCeEEEEe
Q psy17188 73 PAYSYHVTTDGQMQPV-------PFPPDALIGPGIPRHARQINTL----SHGEVVCAVTISNP-TKYVYTGGKGCVKVWD 140 (504)
Q Consensus 73 ~v~~~~~s~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~v~~s~~-~~~l~~~~d~~i~vw~ 140 (504)
.+..++|+++|++... ...++.+..++........... ++...+.+++++++ ++++++..++.|.+||
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d 98 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence 4556667777765555 4445556655433222111111 25567899999999 8877777666899999
Q ss_pred CCCCCCCCce-eeeeecCCCCceEEEEEccCCCEEEEecCC---------------CcEEEEeCCCCCccceeeeecCcC
Q psy17188 141 ISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------------SNLSIWDLASPTPRIKAELTSSAP 204 (504)
Q Consensus 141 ~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------g~i~iw~~~~~~~~~~~~~~~~~~ 204 (504)
.+ +.. ..+ ...........+.+++++++|+++++...+ +.|..|+.. ++. ..+..+..
T Consensus 99 ~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~~~~~~~~ 172 (314)
T 1pjx_A 99 TD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM---IQVDTAFQ 172 (314)
T ss_dssp TT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE---EEEEEEES
T ss_pred CC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE---EEeccCCC
Confidence 87 432 111 100000123458899999999887776544 467777654 332 22223334
Q ss_pred ceEEEEEC----CCCCEEEEE-eCCCcEEEEECC-CCe-----EEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188 205 ACYALAIS----PDSKVCFSC-CSDGNIAVWDLH-NQT-----LVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSW 272 (504)
Q Consensus 205 ~v~~~~~s----~~~~~l~~~-~~dg~i~iwd~~-~~~-----~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~w 272 (504)
....++|+ ++++.|+.+ ..++.|.+||++ +++ ....+..+. ..+..++++++|+++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 46789999 999765555 467899999986 454 233344444 668899999999888887788999999
Q ss_pred ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCC
Q psy17188 273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS 333 (504)
Q Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~ 333 (504)
|.++++.. .....+...+.+++++++++.|+++ ..++.|..|++..
T Consensus 253 d~~~g~~~---------------~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 253 GPDGGQPK---------------MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCS---------------EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcEe---------------EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 98866521 1111223568999999999966555 4567899998764
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=6.9e-12 Score=112.64 Aligned_cols=235 Identities=11% Similarity=0.140 Sum_probs=152.5
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 205 ACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 205 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
-..+..|++++. ++++...++.|..||..+++. ..+. ....+.+++++++++++++ . ++.|.+||.++++...+.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 355788999544 566666788999999988765 3333 4578999999999985554 3 568999999988765432
Q ss_pred ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSSAPACYALAI 354 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~ 354 (504)
.... ......+..++++|+|+++++.... ..-.+|.+.... .. ............++|
T Consensus 90 ~~~~-----------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~-~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 90 TVDN-----------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HV-KKYFDQVDISNGLDW 156 (297)
T ss_dssp ECCT-----------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CE-EEEEEEESBEEEEEE
T ss_pred ecCC-----------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CE-EEEeeccccccceEE
Confidence 1110 0123457889999999966654321 223444443221 11 112222335678999
Q ss_pred CCCCCCceeeeccCCCeEEEEecCC-CCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 355 SPDSKSPFFSSHHYKSCVKVWDISQ-PGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
+|+++. ++++.+.++.|.+|++.. .........+ ...........++++++|++.++....+.|..||..+++....
T Consensus 157 spdg~~-lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 157 SLDHKI-FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp CTTSCE-EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred cCCCCE-EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 999985 556667788999999742 1111111111 1112234677999999998877777788899999987765554
Q ss_pred ecccCCCCceeEEEEC-CCCCEEEEeeC
Q psy17188 433 AELTSSAPACYALAIS-PDSKVCFSCCS 459 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s-~~~~~l~s~~~ 459 (504)
... +...+++++|. ||++.|..++.
T Consensus 236 i~~--p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 236 VKL--PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEC--SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEC--CCCCceEEEEeCCCCCEEEEEcC
Confidence 443 34568999998 88887765544
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=5.6e-12 Score=118.19 Aligned_cols=247 Identities=13% Similarity=0.074 Sum_probs=164.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC--eEEEEECCCCce-EE
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN--TVRSWDLREGCV-KV 281 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~-~~ 281 (504)
....++|+++++++++...++.|++||..+++......... ... ++|+++++.|+++..++ .|.+++...+.. ..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 46789999999877777777899999999887766655433 334 99999999998888766 788888876542 11
Q ss_pred EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee--eccCCCce-e-eEEECCC
Q psy17188 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE--LTSSAPAC-Y-ALAISPD 357 (504)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~~i-~-~~~~~~~ 357 (504)
.. . ........+.+++++|++..|+++..++.|+.||..+........ ........ . .++++|+
T Consensus 210 ~g-----------~-~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 210 IG-----------Q-LGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp EE-----------E-CCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred ee-----------e-ccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 00 0 001134557889999965566667778899999998764222211 11111112 3 8999996
Q ss_pred CCCceeeeccCCCeEEEEecCCCCCCCccccc----------ccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCC
Q psy17188 358 SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL----------DCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS 426 (504)
Q Consensus 358 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----------~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~ 426 (504)
+.. ++++...++.|+.|+.... ...+... .....-.....++++++|+++++-. .++.|+.|++.+
T Consensus 278 ~g~-lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 278 DSN-FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp TTE-EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred CCE-EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 544 6777778889999987542 0000000 0001123477999999999777776 788999999766
Q ss_pred CCcceeeccc------------CCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188 427 PTPRIKAELT------------SSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468 (504)
Q Consensus 427 ~~~~~~~~~~------------~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 468 (504)
+......... ........+++++++.++++-..+++|+.+++
T Consensus 355 G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 355 GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 6432221110 11235788999999888888778888888775
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.53 E-value=2e-12 Score=129.42 Aligned_cols=356 Identities=12% Similarity=0.130 Sum_probs=185.8
Q ss_pred CCcEEEEecCCeEEEEeCCCCCCCCceeeeeec----CCC-Cce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188 124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL----QRD-NYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 197 (504)
Q Consensus 124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~-~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 197 (504)
++++++++.++.|.-+|.++++..-....-... ... ..+ ..+.. ++..|++++.|+.|..+|.++++.....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 344455445777888887776433222110000 000 000 11222 4567888889999999999998865444
Q ss_pred eeecCcCceEEEEECC---CCCEEEEEe------CCCcEEEEECCCCeEEEeecCCC-----------------------
Q psy17188 198 ELTSSAPACYALAISP---DSKVCFSCC------SDGNIAVWDLHNQTLVRQFQGHT----------------------- 245 (504)
Q Consensus 198 ~~~~~~~~v~~~~~s~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~h~----------------------- 245 (504)
....+......+..+| ++ .+++++ .++.|+.||.++|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 4320111111111122 44 444443 36899999999999988765210
Q ss_pred --------CCeEEEEEccCCCEEEEEcCCCe-------------------EEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188 246 --------DGASCIDISADGTKLWTGGLDNT-------------------VRSWDLREGCVKVWDISQPGSKTPVSQLDC 298 (504)
Q Consensus 246 --------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (504)
.....++++|+..+++.+..++. |..+|.++|+. +|......... ..
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~-----wd 300 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDA-----WD 300 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCC-----SC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCccc-----cc
Confidence 01125778888889999888764 99999999985 35443221100 00
Q ss_pred cccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeeccCC-----------------------------
Q psy17188 299 LQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTSSA----------------------------- 346 (504)
Q Consensus 299 ~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----------------------------- 346 (504)
......+.......+|+ .++.++.+|.++++|.++++......+....
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence 00111122222223554 7888999999999999998654322221100
Q ss_pred --------CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEeeC
Q psy17188 347 --------PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGE 415 (504)
Q Consensus 347 --------~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~~~ 415 (504)
..-..++++|+.. ++.+...+....++............. ...... .+...|. +........
T Consensus 381 ~~p~~~Gg~~w~~~a~dp~~~--~~yv~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~--~~~~~p~~~~~~~~~~~~~ 453 (689)
T 1yiq_A 381 VTPAFWGAHDWQPMSYNPDTG--LVYIPAHIMSAYYEHIPEAPKRNPFKS---MYQLGL--RTGMMPEGAEGLLEMAKSW 453 (689)
T ss_dssp ESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEEECCSSCCCCCSCTT---SCCCSS--EECCCCSSHHHHHHHHTTC
T ss_pred eCCCcccccCCCcceECCCCC--EEEEeccccceeeeecccccccccccc---ccccCc--cccccCcccccCCCCCCCc
Confidence 0001133333333 222222222222222111000000000 000000 0000000 000000001
Q ss_pred CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCC
Q psy17188 416 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGT 494 (504)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~ 494 (504)
+|.|+.||+.+++.+........ ...-.+...+.+++.++.||.++.||.++|+++.+++...+. ..-+.|..||+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ceeEEEEECCCCCeEeEccCCCC---ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 47799999999887766554332 222255567889999999999999999999999988754332 24567778887
Q ss_pred EEEE
Q psy17188 495 KLWT 498 (504)
Q Consensus 495 ~l~s 498 (504)
..++
T Consensus 531 qyv~ 534 (689)
T 1yiq_A 531 QYVT 534 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=5.3e-12 Score=118.38 Aligned_cols=247 Identities=9% Similarity=0.050 Sum_probs=161.4
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC--cEEEEECCCCeE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--NIAVWDLHNQTL 237 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~ 237 (504)
.....++|+++++++++...++.|++||..++... ..... ..... ++|+++++.|+++..++ .|.+|+...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~--~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT--TVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE--EEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE--Eeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 45789999999997777777899999999865532 22222 22233 99999999998888766 788998876544
Q ss_pred EEee----cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc-e-EEEEEc
Q psy17188 238 VRQF----QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY-I-RSVKLL 311 (504)
Q Consensus 238 ~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v-~~~~~~ 311 (504)
...+ ......+.+++++|++..|+.+..++.|+.||..++....+.... ....... . ..++|+
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~-----------~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE-----------LSGSLGTNPGPYLIYY 275 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC-----------CCSCCCCSSCCEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc-----------ccCCCCCCccccEEEe
Confidence 3333 224567789999995556666777899999999987654432110 0011111 1 289999
Q ss_pred CC-CCEEEEEeCCCcEEEEeCCCCCccceeeec------------cCCCceeeEEECCCCCCceeeecc-CCCeEEEEec
Q psy17188 312 PD-GRTLIVGGEASNLSIWDLASPTPRIKAELT------------SSAPACYALAISPDSKSPFFSSHH-YKSCVKVWDI 377 (504)
Q Consensus 312 ~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~ 377 (504)
|+ +.++++-..++.|+.|+..... ....-.. ..-.....+++++++. ++++.. .++.|+.|+.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~--lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN--FYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC--EEEEETTTTCEEEEEET
T ss_pred CCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC--EEEEeCCCCCEEEEEEC
Confidence 95 5555555667889999876431 1110000 0023478899999988 777777 8999999996
Q ss_pred CCCCCCCcccc---------cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188 378 SQPGSKTPVSQ---------LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 424 (504)
Q Consensus 378 ~~~~~~~~~~~---------~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~ 424 (504)
..+........ ......-.....++++++|.++++-..++.|+.+++
T Consensus 353 ~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 353 LDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 54321100000 000011245789999999887777777888887764
No 215
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.52 E-value=4.7e-10 Score=115.23 Aligned_cols=401 Identities=9% Similarity=0.071 Sum_probs=239.8
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCC--C---cEEEEEEcCCCcEEEEecCCeEEEEeCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHG--E---VVCAVTISNPTKYVYTGGKGCVKVWDISQPG 145 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~---~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~ 145 (504)
...|.++...++|.+-... . +.+..++... .....+.+. . .|.++...+++++.+.+. +.|..|+.+++.
T Consensus 87 ~n~I~~i~~d~~g~lWigT-~-~Gl~~yd~~~--~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~ 161 (795)
T 4a2l_A 87 NDISRIVKTDSQGRVWIGT-R-DGLSRYDEEK--DIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKESK 161 (795)
T ss_dssp CSCEEEEEECTTSCEEEEE-S-SCEEEEETTT--TEEEEECCEETTEECCCCEEEEEETTEEEEEET-TEEEEEETTTTE
T ss_pred ccceeEEEECCCCCEEEEe-C-CchheeCCCC--CeEEeccccccCCCceEEEEEECCCCCEEEEEC-CceEEEECCCCE
Confidence 3468888888787654333 2 4455544321 122222211 1 188898888998877665 568899976531
Q ss_pred CCCceeeeeecCCCCc-eEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC
Q psy17188 146 SKTPVSQLDCLQRDNY-IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 224 (504)
Q Consensus 146 ~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 224 (504)
+..+........ |.++...+++++.+ ++.++.|..|+..+.+..... .......|.++...+++.+.+ ++.+
T Consensus 162 ----~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~-~~~~~~~i~~i~~d~~g~lwi-gt~~ 234 (795)
T 4a2l_A 162 ----FIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI-PILGTKQIQAILQQSPTRIWV-ATEG 234 (795)
T ss_dssp ----EECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEE-EEBS
T ss_pred ----EEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec-CCCCCCeeEEEEEcCCCCEEE-EECC
Confidence 111110000123 88888888886555 555556899998765432211 112345688888877776544 5544
Q ss_pred CcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188 225 GNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD 297 (504)
Q Consensus 225 g~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 297 (504)
+-+..||..+++....... ....|.++...++|.+. .|+.+ -|.+||..+++...+...... .
T Consensus 235 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~--------~ 304 (795)
T 4a2l_A 235 AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVE--------N 304 (795)
T ss_dssp SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTS--------T
T ss_pred CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCC--------C
Confidence 4599999888765443221 23569999998888644 45555 588999988876543221100 0
Q ss_pred ecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec----cCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188 298 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT----SSAPACYALAISPDSKSPFFSSHHYKSCVK 373 (504)
Q Consensus 298 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~ 373 (504)
.......|.++...++|+ |.+|+.++-|..|+............. .....|.++...+++. +..+..++-+.
T Consensus 305 ~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~---lWiGt~~~Gl~ 380 (795)
T 4a2l_A 305 GSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN---LWIGTNDGGLN 380 (795)
T ss_dssp TSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC---EEEEESSSCEE
T ss_pred CCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC---EEEEECCCCeE
Confidence 011245689999999887 566777777888886554322111111 1234688888887775 55566677788
Q ss_pred EEecCCCCCCCccccc-c-c-ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc--cCCCCceeEEEEC
Q psy17188 374 VWDISQPGSKTPVSQL-D-C-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL--TSSAPACYALAIS 448 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~-~-~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s 448 (504)
.|+............. . . ......|.+++..++|+.|.+|+.++.|..||..+++....... ......|.++...
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 381 LYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD 460 (795)
T ss_dssp EECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEEC
T ss_pred EEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEEC
Confidence 8887643211100000 0 0 01245688999999988667777777799999887653322211 1223568899999
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCcceEEEEee------cCCceEEEEEccCCCEEEEe
Q psy17188 449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG------HTDGASCIDISADGTKLWTG 499 (504)
Q Consensus 449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~s~d~~~l~s~ 499 (504)
+++++.+.. .+| +.+||..+++....... ....|.++...++|+..+..
T Consensus 461 ~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 461 GEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp SSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred CCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 888866654 344 89999887654332111 23568999999888766544
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.52 E-value=1.9e-12 Score=129.32 Aligned_cols=320 Identities=12% Similarity=0.081 Sum_probs=197.2
Q ss_pred CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC---------ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 241 (504)
+..|++++.++.|..+|..+++............ ....+++ ++..+++++.|+.|..+|.++|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 4456666667888888888776544443332110 0112233 4557888889999999999999999888
Q ss_pred cCC-C----CCeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCCCCC--Cc--------------
Q psy17188 242 QGH-T----DGASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPGSKT--PV-------------- 293 (504)
Q Consensus 242 ~~h-~----~~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~--~~-------------- 293 (504)
..+ . ..+.+ ... .+..++.++. ++.|+.+|..+|+. +|......... +.
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGER-KWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcE-EEEeccCCCCccccccccccccccccccc
Confidence 754 2 11211 111 1345555543 79999999999985 45554322110 00
Q ss_pred -cc-ceecccCCceEEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCCccceeeeccCC------
Q psy17188 294 -SQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEAS-------------------NLSIWDLASPTPRIKAELTSSA------ 346 (504)
Q Consensus 294 -~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~~~~~------ 346 (504)
.. ............+++++++..++++..++ .|..+|.++++.........+.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 00 00001122234678899999999887664 4999999998766555543331
Q ss_pred -CceeeEEECCCCC-CceeeeccCCCeEEEEecCCCCCCCccccccc-----c-cCC-----------------------
Q psy17188 347 -PACYALAISPDSK-SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC-----L-QRD----------------------- 395 (504)
Q Consensus 347 -~~i~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-----~-~~~----------------------- 395 (504)
.....+....+++ ...++.++.+|.+.++|..+++.......... . ...
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 1122223333552 12688888999999999987654222111000 0 000
Q ss_pred -CceEEEEEcCCCCEEEEeeC-------------------------------------------CCcEEEeeCCCCCcce
Q psy17188 396 -NYIRSVKLLPDGRTLIVGGE-------------------------------------------ASNLSIWDLASPTPRI 431 (504)
Q Consensus 396 -~~i~~~~~s~~g~~l~~~~~-------------------------------------------dg~i~iwd~~~~~~~~ 431 (504)
..-..++++|++.++++... .|.|..||+.+++.+.
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 00125789999888887543 1679999999988766
Q ss_pred eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecC-CceEEEEEccCCCEEEE
Q psy17188 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWT 498 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l~s 498 (504)
...... .+....+..++..++.++.||.+++||.++++++.++.... ....-+.|..+|+.++.
T Consensus 472 ~~~~~~---~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 472 SVEHVS---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ecCCCC---CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 655432 22333566678889999999999999999999999987443 22345567788875544
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=3.7e-12 Score=116.96 Aligned_cols=264 Identities=14% Similarity=0.113 Sum_probs=161.0
Q ss_pred CceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEee-------cCCCCCeEEEEEccCCCEEEEEcC-----CCeE
Q psy17188 204 PACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQF-------QGHTDGASCIDISADGTKLWTGGL-----DNTV 269 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i 269 (504)
.....++++++|+++++.. .++.++||.+.+++.. .+ ..+...+.+++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999888864 2343555555466543 22 235568999999999876555433 5789
Q ss_pred EEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-e---CCCcEEEEeCCCCCccceeeecc
Q psy17188 270 RSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-G---EASNLSIWDLASPTPRIKAELTS 344 (504)
Q Consensus 270 ~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i~v~d~~~~~~~~~~~~~~ 344 (504)
.+||+.+++ .+.+...... ......+..+++++++..++++ . .++.|.+||..+++. ...+..
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~--~r~~~~ 163 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA--ARVLQG 163 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE--EEECTT
T ss_pred EEEECCCCeEEEEEECChhh----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE--EEEecC
Confidence 999999887 3333322110 1123456889999865555444 3 577899999987642 222222
Q ss_pred CCCce-eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC-cEEEe
Q psy17188 345 SAPAC-YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIW 422 (504)
Q Consensus 345 ~~~~i-~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~i~iw 422 (504)
|.... ....+.+++. .+.+...++.+..|. ..+..++|+|||+.|+++..++ .++.+
T Consensus 164 ~~~~~~~~~~~~~~g~--~~~~~~~~g~~~~~~-------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGV--PVQIGQPDGTVIRPH-------------------LGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp CTTTSCCSCCCEETTE--ECBEECTTSCEECCC-------------------CCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCcccccccceeECCE--EEEeccCCCceecee-------------------cccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 11100 0122333443 333444455554432 1256899999999998887766 44444
Q ss_pred eCC---CCCcc-----eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCC
Q psy17188 423 DLA---SPTPR-----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADG 493 (504)
Q Consensus 423 d~~---~~~~~-----~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~ 493 (504)
+.. .+... ......++......++++++|+++++...++.|.+||.++++....... +...+.+++|.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 421 11100 0001111222345679999999999988899999999866764333322 23468999999999
Q ss_pred CEEEEecC
Q psy17188 494 TKLWTGGL 501 (504)
Q Consensus 494 ~~l~s~s~ 501 (504)
+++++.+.
T Consensus 303 ~l~v~~~~ 310 (343)
T 2qe8_A 303 YLYFDCNQ 310 (343)
T ss_dssp CEEEEECC
T ss_pred cEEEEeCc
Confidence 88887664
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.50 E-value=4.4e-11 Score=108.82 Aligned_cols=225 Identities=14% Similarity=0.160 Sum_probs=149.6
Q ss_pred CeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc
Q psy17188 247 GASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 325 (504)
Q Consensus 247 ~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 325 (504)
...+..|+|++ .++++...++.|..||..+++...+. ....+.+++++++|+++++. .+ .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-----------------~~~~v~~i~~~~dg~l~v~~-~~-g 110 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-----------------LPFMGSALAKISDSKQLIAS-DD-G 110 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-----------------CSSCEEEEEEEETTEEEEEE-TT-E
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------------CCCcceEEEEeCCCeEEEEE-CC-C
Confidence 34678899974 45666677889999999988754321 13468899999999876654 44 4
Q ss_pred EEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188 326 LSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNY 397 (504)
Q Consensus 326 i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (504)
|.+||..+++......... ....+..++++|+++ ++++... .+.|..++ .+ .. ... ......
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~v~~~~~~~~~~~~~l~~~~--~g-~~---~~~--~~~~~~ 180 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA--LWIGTMGRKAETGAGSIYHVA--KG-KV---TKL--FADISI 180 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC--EEEEEEETTCCTTCEEEEEEE--TT-EE---EEE--EEEESS
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC--EEEEeCCCcCCCCceEEEEEe--CC-cE---EEe--eCCCcc
Confidence 9999987765332222111 123578899999997 4444322 24455555 21 11 111 112234
Q ss_pred eEEEEEcCCCCEEEEe-eCCCcEEEeeCC--CC-Ccc---eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 398 IRSVKLLPDGRTLIVG-GEASNLSIWDLA--SP-TPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~-~~dg~i~iwd~~--~~-~~~---~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
...++|+||++.|+.+ +.++.|.+|++. ++ ... ....+.........++++++|+++++...++.|.+|+. +
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence 5689999999877655 456889999986 44 211 11222223345678999999998887777788999998 6
Q ss_pred cceEEEEeecCCceEEEEEc-cCCCEEEEecC
Q psy17188 471 QTLVRQFQGHTDGASCIDIS-ADGTKLWTGGL 501 (504)
Q Consensus 471 ~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s~ 501 (504)
++.+..+..+...+++++|+ +|++.|+.++.
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 77778887777789999998 88887765543
No 219
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.49 E-value=9.5e-10 Score=112.98 Aligned_cols=357 Identities=9% Similarity=0.064 Sum_probs=221.8
Q ss_pred EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc
Q psy17188 116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 195 (504)
Q Consensus 116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 195 (504)
|.++...+++++.+...++.|..|+.+++.. ...........|.++...+++.+.+. +.++-|.+||..+.+...
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~----~~~~~~~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTF----EKVIPILGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCE----EECC----CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeE----EEecCCCCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEE
Confidence 8889888889888766555688899765421 11111123567899988888775554 444458899987644221
Q ss_pred eeee-----ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEE
Q psy17188 196 KAEL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTG 263 (504)
Q Consensus 196 ~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~ 263 (504)
.... .-....|.++...++|.+.+ |+.+ -|.+||..+++....... ....|.++...++|. |..|
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWig 326 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLG 326 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEE
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEE
Confidence 1100 01235699999988887554 4455 589999888765443221 235799999998885 5667
Q ss_pred cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.++-|..++..++....+..... ........|.++...++|+ |.+|+.++-|..|+..+..........
T Consensus 327 t~~~Gl~~~~~~~~~~~~~~~~~~---------~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~ 396 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNRFKNIRNIPY---------KNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQE 396 (795)
T ss_dssp ESSSCEEEECGGGGSSEEECCCTT---------SSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC-
T ss_pred ECCCCeEEeCCCcccceEEcCCCC---------CCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCC
Confidence 777788999887765443321110 0011245689999998887 566777777999998765322211110
Q ss_pred ------cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188 344 ------SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 417 (504)
Q Consensus 344 ------~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg 417 (504)
.....|.++...+++. ++..+..++-+..||..++.... ............|.++...++|.+.+.. . +
T Consensus 397 ~~~~~~l~~~~v~~i~~d~~g~--~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~ 471 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDEKKS--LVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-L-S 471 (795)
T ss_dssp -----CCSCSCEEEEEEETTTT--EEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-S
T ss_pred CCcccCCCCccEEEEEEcCCCC--EEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-c-C
Confidence 1234677888777764 35566666778999876542111 1100001234578899999988755544 4 4
Q ss_pred cEEEeeCCCCCcceeecc----cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-------ecCCceEE
Q psy17188 418 NLSIWDLASPTPRIKAEL----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASC 486 (504)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~----~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~ 486 (504)
.+.+||..+++....... .-....|.++...+++++.+... + -+..||..+++. .+. .....|.+
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~ 547 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNC 547 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEE
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEE
Confidence 589999876543222111 11235688999999998776554 4 488999877765 332 12346899
Q ss_pred EEEccCCCEEEEe
Q psy17188 487 IDISADGTKLWTG 499 (504)
Q Consensus 487 ~~~s~d~~~l~s~ 499 (504)
+...++|+..++.
T Consensus 548 i~~d~~g~lWigT 560 (795)
T 4a2l_A 548 IYEASNGIIWVGT 560 (795)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEECCCCCEEEEe
Confidence 9998888865543
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.4e-11 Score=111.12 Aligned_cols=235 Identities=11% Similarity=0.111 Sum_probs=152.7
Q ss_pred EEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188 238 VRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 316 (504)
Q Consensus 238 ~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 316 (504)
+..+........+..|+|+++ ++++...++.|..|+. +++...+ ......+..++++++|++
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~----------------~~~~~~~~gl~~d~dG~l 99 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVL----------------LDATAFTNGNAVDAQQRL 99 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEE----------------EESCSCEEEEEECTTSCE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEE----------------eCCCCccceeeECCCCCE
Confidence 333444556678899999998 6677778899999998 4544322 123455889999999997
Q ss_pred EEEEeCCCcEEEEeCCCCCccceeee-cc-CCCceeeEEECCCCCCceeee----ccC-------------CCeEEEEec
Q psy17188 317 LIVGGEASNLSIWDLASPTPRIKAEL-TS-SAPACYALAISPDSKSPFFSS----HHY-------------KSCVKVWDI 377 (504)
Q Consensus 317 l~~~~~dg~i~v~d~~~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~~~~~~----~~~-------------~~~i~i~d~ 377 (504)
+++...++.|.+|+.. ++....... .. ....+..+++.+++. ++++ +.. .+.|..+|.
T Consensus 100 ~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 100 VHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 7666666789999975 332211111 11 123467899999997 5554 221 245666665
Q ss_pred CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC------CcEEEeeCCCCCcceeec-ccCCCCceeEEEECCC
Q psy17188 378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRIKAE-LTSSAPACYALAISPD 450 (504)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d------g~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~ 450 (504)
..+.... + . .......++|+||++.|+++... +.|++|++.......... ..........++++++
T Consensus 177 ~~g~~~~-~---~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~ 249 (305)
T 3dr2_A 177 DGSPLQR-M---A---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG 249 (305)
T ss_dssp SSCCCEE-E---E---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT
T ss_pred CCCcEEE-E---e---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC
Confidence 4432211 1 1 12345689999999988877665 689999987543110001 1112233456799999
Q ss_pred CCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188 451 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 451 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
|++.++. .+| |.+|+. +++.+..+..+. .+.+++|+++++.|+.++.++
T Consensus 250 G~lwv~~-~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 250 GWLWSSS-GTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp SCEEECC-SSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred CCEEEec-CCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 9955544 554 999997 577777777554 589999999999888877653
No 221
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.49 E-value=1.6e-11 Score=114.44 Aligned_cols=303 Identities=9% Similarity=0.066 Sum_probs=181.5
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCccceeeeecC-------cCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188 170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSS-------APACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-------~~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 241 (504)
++..+++++.++.|..+|.++++.......... ...+. .+.. ++..+++++.++.|..+|.++++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 356777788889999999988876544443221 12222 2222 4557888889999999999999988777
Q ss_pred cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 321 (504)
Q Consensus 242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 321 (504)
............. +..++.++.++.|..+|..+|+. +|........ ...... ...... +..++++.
T Consensus 130 ~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~-----~~~~~~----~~~~~~--~~~v~~g~ 195 (376)
T 3q7m_A 130 KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPS-----LSLRGE----SAPTTA--FGAAVVGG 195 (376)
T ss_dssp ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEECCC----------CCC----CCCEEE--TTEEEECC
T ss_pred eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCc-----eeecCC----CCcEEE--CCEEEEEc
Confidence 6443222222222 44788888999999999999874 3443322110 000000 111111 45678888
Q ss_pred CCCcEEEEeCCCCCccceeeeccCCCc-----eeeEEECC--CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188 322 EASNLSIWDLASPTPRIKAELTSSAPA-----CYALAISP--DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR 394 (504)
Q Consensus 322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~-----i~~~~~~~--~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 394 (504)
.++.+..+|..+++............. +..+...| .+. .+..++.++.+..+|..+++......
T Consensus 196 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~v~~~~~~g~l~~~d~~tG~~~w~~~------- 266 (376)
T 3q7m_A 196 DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG--VVFALAYNGNLTALDLRSGQIMWKRE------- 266 (376)
T ss_dssp TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT--EEEEECTTSCEEEEETTTCCEEEEEC-------
T ss_pred CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC--EEEEEecCcEEEEEECCCCcEEeecc-------
Confidence 899999999988865544433221100 00000111 122 45566678899999987654221111
Q ss_pred CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188 395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 474 (504)
Q Consensus 395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 474 (504)
......+.. ++..|++++.++.|..+|..+++.+........ ..+..... .+..|+.++.+|.++++|..+++.+
T Consensus 267 ~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 267 LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 112233333 466788888899999999999886655442111 11222222 3567888889999999999999998
Q ss_pred EEEeecCCceEE-EEEccCCCEEEEecCCCC
Q psy17188 475 RQFQGHTDGASC-IDISADGTKLWTGGLDNT 504 (504)
Q Consensus 475 ~~~~~h~~~v~~-~~~s~d~~~l~s~s~Dgt 504 (504)
.........+.. ... .+..|+.++.||+
T Consensus 342 ~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVA--ADGKLLIQAKDGT 370 (376)
T ss_dssp EEEECCTTCBCSCCEE--ETTEEEEEBTTSC
T ss_pred EEEecCCCcceeCCEE--ECCEEEEEeCCCE
Confidence 877753333332 222 2456777887764
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=1.5e-11 Score=111.00 Aligned_cols=242 Identities=12% Similarity=0.029 Sum_probs=153.5
Q ss_pred eecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188 199 LTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG 277 (504)
Q Consensus 199 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~ 277 (504)
+...........|+++++ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 334445567899999998 5666667889999998 454 34455566778999999999877766667899999986 5
Q ss_pred ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCCCcccee
Q psy17188 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV----GGE-------------ASNLSIWDLASPTPRIKA 340 (504)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~v~d~~~~~~~~~~ 340 (504)
+...+... ........+..++++++|++.++ +.. .+.|..+|..+++.....
T Consensus 117 ~~~~~~~~-----------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 117 QAHLLVGR-----------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEEEEECE-----------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEEec-----------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 54322100 00111234678999999997776 322 245777777655433222
Q ss_pred eeccCCCceeeEEECCCCCCceeeeccC----CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188 341 ELTSSAPACYALAISPDSKSPFFSSHHY----KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416 (504)
Q Consensus 341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d 416 (504)
.......++|+|+++.++++.... .+.|.+|++.... ......+. .........++++++|+ |.+++.+
T Consensus 186 ----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~-~~~~~~pdgi~~d~~G~-lwv~~~~ 258 (305)
T 3dr2_A 186 ----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFA-SVPDGLPDGFCVDRGGW-LWSSSGT 258 (305)
T ss_dssp ----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEE-CCSSSCCCSEEECTTSC-EEECCSS
T ss_pred ----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEE-ECCCCCCCeEEECCCCC-EEEecCC
Confidence 223567899999998533332221 3789999987542 11001110 11233445789999999 4444444
Q ss_pred CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188 417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 467 (504)
Q Consensus 417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 467 (504)
.|.+|+.. ++......... .+..++|+++++.|..++.++ +..++
T Consensus 259 -gv~~~~~~-g~~~~~~~~~~---~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 259 -GVCVFDSD-GQLLGHIPTPG---TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp -EEEEECTT-SCEEEEEECSS---CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred -cEEEECCC-CCEEEEEECCC---ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 49999984 44443433332 478889999999888887765 43333
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=4.7e-12 Score=127.70 Aligned_cols=244 Identities=9% Similarity=0.120 Sum_probs=154.7
Q ss_pred cCCCcEEEEEEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC---
Q psy17188 111 SHGEVVCAVTISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--- 181 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--- 181 (504)
+|...+..++|||||++||.+. +..|++||+++++.. .. .. +......++|+ |++.|+.+..+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~---~~-~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL---ET-PL--KDVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE---EE-EE--EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC---cc-cc--CCceeccEEEe-CCCEEEEEEecCccc
Confidence 3566889999999999998532 257999999986421 11 11 11113577899 999999988774
Q ss_pred ----------cEEEEeCCCCCcccee--eeec-CcCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCe-EEEeecC
Q psy17188 182 ----------NLSIWDLASPTPRIKA--ELTS-SAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQT-LVRQFQG 243 (504)
Q Consensus 182 ----------~i~iw~~~~~~~~~~~--~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~ 243 (504)
.|++|++.+....... .... |......+.|+||+++|+.... +..|+++|+.++. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 3999999876543222 2233 3445788999999998765442 3479999998763 3445555
Q ss_pred CCCCeEEEEEccCCCEEEEEc-CC---CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE
Q psy17188 244 HTDGASCIDISADGTKLWTGG-LD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV 319 (504)
Q Consensus 244 h~~~v~~~~~~~~~~~l~s~~-~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 319 (504)
+....... +++++..|+..+ .+ +.|..+|+.++....| .....+...+. .|+++++.|+.
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~-------------~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW-------------RDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-------------EEEECCCSSCE--EEEEETTEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-------------EEEecCCCCEE--EEEEECCEEEE
Confidence 66666555 666666555443 33 5788899887642101 11122333333 88898988877
Q ss_pred EeCCC---cEEEEeCCCCCccceeeec-cCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCC
Q psy17188 320 GGEAS---NLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQP 380 (504)
Q Consensus 320 ~~~dg---~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~ 380 (504)
...++ .|++|++.... ...+. .....+..+.++++++.+++...+ .-+.+..||+..+
T Consensus 343 ~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 65544 68899887542 12222 233456677778888865544433 2377888887654
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.48 E-value=1.3e-12 Score=119.12 Aligned_cols=284 Identities=11% Similarity=0.061 Sum_probs=171.2
Q ss_pred eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeeecC--
Q psy17188 135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELTSS-- 202 (504)
Q Consensus 135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~-- 202 (504)
+|.++|.++.+. +..+.. +. .+ .+.++||+++++++. .++.|.+||+.+.+......+.+.
T Consensus 47 ~vsvID~~t~~v---~~~i~v-G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVT---LGHSLG-AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEE---EEEEEE-CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeE---EEEEeC-CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 888999988533 333332 22 33 799999999999886 367899999998775433333210
Q ss_pred ---cCceEEEEECCCCCEEEEEeC--CCcEEE--EECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEEC
Q psy17188 203 ---APACYALAISPDSKVCFSCCS--DGNIAV--WDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 203 ---~~~v~~~~~s~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~ 274 (504)
......++++|||++++++.. +..|.+ +|+.+ +..+.. .+. ..+.|++ ..+++.+.|+.+.+.|+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 022456899999999998874 356888 88877 444432 111 1233444 35566778888888898
Q ss_pred CC-----CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188 275 RE-----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 349 (504)
Q Consensus 275 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i 349 (504)
.+ +++.. .. . ..... ...+. . .+++..++..+. +.+.+.|...........
T Consensus 193 ~~~~~~~~~v~~-~~------t--~~i~v--g~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~-------- 248 (368)
T 1mda_H 193 AAAPAAAGIVGA-QC------T--GAQNC--SSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAA-------- 248 (368)
T ss_dssp CSSCCCCEECCC-CS------C--TTSCB--CSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECC--------
T ss_pred ccccccCCeEEE-Ee------e--eeeeC--CCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEE--------
Confidence 86 33210 00 0 01111 11222 3 555666666556 888888876432111110
Q ss_pred eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-C--------CcEE
Q psy17188 350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A--------SNLS 420 (504)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-d--------g~i~ 420 (504)
|++.... ..... ........++++||+++++++.. + +.+.
T Consensus 249 -------------------------~~~~~~~----~~~~~--~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 249 -------------------------IDGNESG----RKADN--FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp -------------------------CCSSCTH----HHHTT--EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred -------------------------EEecccc----ccccc--cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 1110000 00000 00011113679999998887643 2 3567
Q ss_pred EeeCCCCCcceeecccCCCCceeEEEECCCCCE-EEEee-CCCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188 421 IWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491 (504)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~-l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~ 491 (504)
++|+.+.+.+....... ....++|+||+++ +++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 298 ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 298 SVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred EEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 99999887665554443 4678899999984 55555 589999999999999999885443 45565544
No 225
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=1.1e-12 Score=120.00 Aligned_cols=171 Identities=10% Similarity=0.056 Sum_probs=130.3
Q ss_pred ceEEEEEccCCCEEEEecCCCcEEEEeCCCCC---------ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188 161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPT---------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231 (504)
Q Consensus 161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 231 (504)
.++.+++++...++++|+.+ .+.+|++++.. ..... ...+.. |+.++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68899999999999999887 56669875332 11112 223555 999999 88999998 889999999
Q ss_pred CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
+.+.........|...+.++.+.+. .+++++.||.|.+||+.++... .....|++++|+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-------------------~~~~~Vs~v~WS 171 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-------------------QLAQNVTSFDVT 171 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-------------------EEEESEEEEEEC
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-------------------cccCCceEEEEc
Confidence 9877665666667888888887754 3888999999999999987632 123569999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCccceeee------c---cCCCceeeEEECCCCCC
Q psy17188 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL------T---SSAPACYALAISPDSKS 360 (504)
Q Consensus 312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~------~---~~~~~i~~~~~~~~~~~ 360 (504)
|+| ++++..||++++|+...........+ . .+...+.++.|.+++..
T Consensus 172 pkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 172 NSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp SSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred CCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 999 77899999999998876542112222 2 35678999999998873
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.47 E-value=4.3e-12 Score=115.77 Aligned_cols=244 Identities=9% Similarity=-0.018 Sum_probs=155.2
Q ss_pred cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188 226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQ 295 (504)
Q Consensus 226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 295 (504)
.|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~-------------~ 111 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA-------------D 111 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE-------------E
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE-------------E
Confidence 7889999999999999765555 799999999888875 46899999999988532 1
Q ss_pred ceec-----ccCCceEEEEEcCCCCEEEEEeC--CCcEEE--EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188 296 LDCL-----QRDNYIRSVKLLPDGRTLIVGGE--ASNLSI--WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH 366 (504)
Q Consensus 296 ~~~~-----~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v--~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 366 (504)
+... ........++++|||++++++.. +..+.+ +|..+ ...+.... +..+.|+++. .+++.
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~~----~~~~~p~g~~-~~~~~ 181 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSAS----CFHIHPGAAA-THYLG 181 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECSS----CCCCEEEETT-EEECC
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECCC----ceEEccCCCe-EEEEE
Confidence 1111 00123567999999999999875 456888 88876 11221111 1224466665 45566
Q ss_pred cCCCeEEEEecCC----CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-----
Q psy17188 367 HYKSCVKVWDISQ----PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----- 437 (504)
Q Consensus 367 ~~~~~i~i~d~~~----~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----- 437 (504)
+.|+.+.+.|+.. .............-...+. + ++++..++..+. +.+.+.|..+..........-
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~ 256 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence 6788888888765 1111100000000112222 3 666666666666 999999987543222111110
Q ss_pred -----CCCceeEEEECCCCCEEEEeeC-C--------CcEEEEEcCCcceEEEEeecCCceEEEEEccCCCE-EEEec
Q psy17188 438 -----SAPACYALAISPDSKVCFSCCS-D--------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWTGG 500 (504)
Q Consensus 438 -----~~~~v~~l~~s~~~~~l~s~~~-d--------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~-l~s~s 500 (504)
.......++++||++.++.+.. + +.+.++|+.+++.+.++.... ....++|+|||++ +++..
T Consensus 257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEE
T ss_pred cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEcc
Confidence 0011112589999998887643 2 356799999999999887544 6889999999985 44444
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=4.8e-12 Score=116.20 Aligned_cols=274 Identities=11% Similarity=0.069 Sum_probs=164.4
Q ss_pred CceEEEEEccCCCEEEEec--CCCcEEEEeCCCCCccce----eeeecCcCceEEEEECCCCCEEEEEeC-----CCcEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIK----AELTSSAPACYALAISPDSKVCFSCCS-----DGNIA 228 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~ 228 (504)
.....++++++|+.+++.. .++.++||.+.+++.... .....+...+..++++++++++++-.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 6789999999999888853 234355555543321100 011234567899999999876665433 57899
Q ss_pred EEECCCCeEEEeecCC------CCCeEEEEEccCCCEE-EEEc---CCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188 229 VWDLHNQTLVRQFQGH------TDGASCIDISADGTKL-WTGG---LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC 298 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l-~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (504)
+||+.+++.+..+... ...+..+++++++..+ ++-. .++.|.+||+.+++..... .
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~--~------------ 162 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL--Q------------ 162 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC--T------------
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe--c------------
Confidence 9999999877766432 2456899999865444 5544 5789999999888643211 0
Q ss_pred cccCCc-eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188 299 LQRDNY-IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI 377 (504)
Q Consensus 299 ~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 377 (504)
.+... .....+.++|..+.+...++.+..|. ..+..++++|+++. ++++......+..++.
T Consensus 163 -~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 163 -GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEW-LYLSPMHSTSMYRIKS 224 (343)
T ss_dssp -TCTTTSCCSCCCEETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCE-EEEEESSCSEEEEEEH
T ss_pred -CCCcccccccceeECCEEEEeccCCCceecee----------------cccceeEeccCCCE-EEEEeCCCCeEEEEEH
Confidence 00000 00022333566666666666665543 14567899998874 2333333345555543
Q ss_pred CCCC--CCCc---ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188 378 SQPG--SKTP---VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 452 (504)
Q Consensus 378 ~~~~--~~~~---~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~ 452 (504)
.... .... ...+....+......++++++|.++++...++.|.+||..+++........ .......++|.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGY 303 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTSC
T ss_pred HHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCCc
Confidence 2100 0000 000111112234557999999999888888999999998545432222211 244578999999999
Q ss_pred EEEEeeCCCcEEEE
Q psy17188 453 VCFSCCSDGNIAVW 466 (504)
Q Consensus 453 ~l~s~~~dg~i~iw 466 (504)
++++.+..+.+.+|
T Consensus 304 l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 304 LYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEEECCGGGSGGG
T ss_pred EEEEeCcccccccc
Confidence 88887765544433
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.46 E-value=7.7e-12 Score=126.12 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=155.6
Q ss_pred CCCceEEEEEccCCCEEEEe-----cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc------
Q psy17188 158 RDNYIRSVKLLPDGRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN------ 226 (504)
Q Consensus 158 ~~~~v~~~~~s~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~------ 226 (504)
+...+..++|||||++||.+ +....|++||+.+++.... .+... ....++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCccccccc
Confidence 45578899999999999864 3335799999998764221 12111 12467899 9999998887743
Q ss_pred -------EEEEECCCCe----EEEeecC-CCCCeEEEEEccCCCEEEEEc----CCCeEEEEECCCCceEEEeecCCCCC
Q psy17188 227 -------IAVWDLHNQT----LVRQFQG-HTDGASCIDISADGTKLWTGG----LDNTVRSWDLREGCVKVWDISQPGSK 290 (504)
Q Consensus 227 -------i~iwd~~~~~----~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~dg~i~~wd~~~~~~~~~~~~~~~~~ 290 (504)
|++|++.++. ++..... |......+.|+|||++|+... .+..|+++|+.++...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~---------- 272 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP---------- 272 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC----------
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc----------
Confidence 9999998753 4444444 555678899999999875433 2358999998776311
Q ss_pred CCcccceecccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188 291 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH 366 (504)
Q Consensus 291 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 366 (504)
......+....... ++++|..|+..+. .+.|..+|+.++.......+..+...+. .++++++. ++++.
T Consensus 273 ----~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~-lv~~~ 344 (693)
T 3iuj_A 273 ----LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGY-LFAEY 344 (693)
T ss_dssp ----CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTE-EEEEE
T ss_pred ----eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCE-EEEEE
Confidence 11112222333333 6666666655443 2579999998765422233444444444 88888875 34444
Q ss_pred cCCC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC----CcEEEeeCCCCCcc
Q psy17188 367 HYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPR 430 (504)
Q Consensus 367 ~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d----g~i~iwd~~~~~~~ 430 (504)
..++ .|++|++.... ...+. ......+..+.++++++.|+....+ +.|+.||+.+++..
T Consensus 345 ~~~g~~~l~~~d~~g~~----~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 345 MVDATARVEQFDYEGKR----VREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EETTEEEEEEECTTSCE----EEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred EECCeeEEEEEECCCCe----eEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 4444 67888876321 11111 1234457777888888877766544 78999999876543
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.46 E-value=1.7e-10 Score=105.48 Aligned_cols=231 Identities=18% Similarity=0.178 Sum_probs=148.6
Q ss_pred cCCCEEEEe-cCCCcEEEEeCCCC--Cccceeeee-------cCcCceEEEEECCCCCEEEEEeCC------CcEEEEEC
Q psy17188 169 PDGRTLIVG-GEASNLSIWDLASP--TPRIKAELT-------SSAPACYALAISPDSKVCFSCCSD------GNIAVWDL 232 (504)
Q Consensus 169 ~~~~~l~~~-~~dg~i~iw~~~~~--~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~ 232 (504)
++.++|++. ..++.|.++|+.+. +++....+. .....-..+..+|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778887765 56788999999744 222333331 011134557788999 77766655 78999999
Q ss_pred CCCeEEEeecCCCC---CeEEEEEccCCCEEEEEc-------------------CCCeEEEEECCCCceEEEeecCCCCC
Q psy17188 233 HNQTLVRQFQGHTD---GASCIDISADGTKLWTGG-------------------LDNTVRSWDLREGCVKVWDISQPGSK 290 (504)
Q Consensus 233 ~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~-------------------~dg~i~~wd~~~~~~~~~~~~~~~~~ 290 (504)
++++.+.++..... --..+.|+|+++.+++.. .+.+|.+||+.++++..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~--------- 242 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH--------- 242 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE---------
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee---------
Confidence 99999998863222 234588899999888884 46899999999875321
Q ss_pred CCcccceecccCCceEEEEE--cCCCCEEEEEeC------CCcEEEEeCCCCCccceeee--cc----------------
Q psy17188 291 TPVSQLDCLQRDNYIRSVKL--LPDGRTLIVGGE------ASNLSIWDLASPTPRIKAEL--TS---------------- 344 (504)
Q Consensus 291 ~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~--~~---------------- 344 (504)
.+...........+.| +|++++++++++ +++|.+|....++......+ ..
T Consensus 243 ----tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 243 ----SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp ----EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred ----EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence 1111111233455655 999999888774 55777665543322111111 00
Q ss_pred CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC------------CCceEEEEEcCCCCEEEE
Q psy17188 345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR------------DNYIRSVKLLPDGRTLIV 412 (504)
Q Consensus 345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~------------~~~i~~~~~s~~g~~l~~ 412 (504)
.......+.+++|++. ++++....+.|.+||+......+.......-.. ......++++|||++|++
T Consensus 319 ~~~~pa~I~lS~DGrf-LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 319 VPPLVTDIDISLDDKF-LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp ECCCCCCEEECTTSCE-EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred CCCceeEEEECCCCCE-EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 0235788999999997 556666678999999975433333332222100 113568999999999999
Q ss_pred ee
Q psy17188 413 GG 414 (504)
Q Consensus 413 ~~ 414 (504)
+.
T Consensus 398 aN 399 (462)
T 2ece_A 398 TN 399 (462)
T ss_dssp EC
T ss_pred Ec
Confidence 86
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=2.5e-10 Score=103.83 Aligned_cols=231 Identities=11% Similarity=0.024 Sum_probs=147.3
Q ss_pred eEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188 206 CYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI 284 (504)
Q Consensus 206 v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 284 (504)
..+..|+|++. ++++...++.|..||.++++.. .+. ....+.++.++++++++++. .+ .|.+||..+++...+..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 45678999754 5566667889999999887653 333 35679999999999876654 33 59999998887643211
Q ss_pred cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
.. .......+..++++|+|+++++... .+.|..++ +++.. .+.........++|+|++
T Consensus 127 ~~-----------~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~---~~~~~~~~~~~i~~s~dg 190 (326)
T 2ghs_A 127 LE-----------SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT---KLFADISIPNSICFSPDG 190 (326)
T ss_dssp SS-----------TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE---EEEEEESSEEEEEECTTS
T ss_pred CC-----------CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE---EeeCCCcccCCeEEcCCC
Confidence 00 0011245789999999997665432 24566666 33211 111222356789999999
Q ss_pred CCceeeeccCCCeEEEEecC--CCCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188 359 KSPFFSSHHYKSCVKVWDIS--QPGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 435 (504)
Q Consensus 359 ~~~~~~~~~~~~~i~i~d~~--~~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 435 (504)
+. ++++...++.|.+||+. .+........+ ...........++++++|.+.++...++.|.+||.. ++......
T Consensus 191 ~~-lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~- 267 (326)
T 2ghs_A 191 TT-GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYE- 267 (326)
T ss_dssp CE-EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEE-
T ss_pred CE-EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEE-
Confidence 85 44555667899999986 32011111111 111223456789999999877776667889999984 44333333
Q ss_pred cCCCCceeEEEEC-CCCCEEEEeeCC
Q psy17188 436 TSSAPACYALAIS-PDSKVCFSCCSD 460 (504)
Q Consensus 436 ~~~~~~v~~l~~s-~~~~~l~s~~~d 460 (504)
.....+++++|+ ++++.|+.++..
T Consensus 268 -~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 -VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp -CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred -CCCCCcEEEEEecCCCCEEEEEecC
Confidence 334568999998 888877655443
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.44 E-value=1.6e-10 Score=107.61 Aligned_cols=312 Identities=13% Similarity=0.090 Sum_probs=176.6
Q ss_pred CCcEEEEecCCeEEEEeCCCCCCCCceeeeeec----CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188 124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 199 (504)
Q Consensus 124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 199 (504)
++++++...++.|..+|.++++..-........ .....+.+. ...++..+++++.++.|..+|.++++.......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 344444445888999998876432221110000 001223222 222456788888899999999998876544433
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe-----EEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188 200 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-----SCIDISADGTKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 200 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~dg~i~~wd~ 274 (504)
.... ...... .+..+++++.++.|..+|.++++.+..+....... ...... +..++.++.++.+..+|.
T Consensus 132 ~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 132 AGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp SSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred CCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 3221 111112 23477888899999999999999888776432211 112222 447888888999999999
Q ss_pred CCCceEEEeecCCCCCCC--cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188 275 REGCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 352 (504)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~ 352 (504)
.+++. .|.......... ...+. .....+ .. .+..+++++.++.+..+|.++++........ ....+
T Consensus 206 ~tG~~-~w~~~~~~~~~~~~~~~~~-~~~~~p----~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~ 273 (376)
T 3q7m_A 206 EQGQM-IWQQRISQATGSTEIDRLS-DVDTTP----VV--VNGVVFALAYNGNLTALDLRSGQIMWKRELG----SVNDF 273 (376)
T ss_dssp TTCCE-EEEEECCC------------CCCCCC----EE--ETTEEEEECTTSCEEEEETTTCCEEEEECCC----CEEEE
T ss_pred CCCcE-EEEEecccCCCCccccccc-ccCCCc----EE--ECCEEEEEecCcEEEEEECCCCcEEeeccCC----CCCCc
Confidence 99875 344332211000 00000 000011 11 2467888888999999999887644333221 23333
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
... +. .+..+..++.+..+|..+++........ ....+..... .+..|++++.+|.|+++|.++++.+..
T Consensus 274 ~~~--~~--~l~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 274 IVD--GN--RIYLVDQNDRVMALTIDGGVTLWTQSDL----LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp EEE--TT--EEEEEETTCCEEEEETTTCCEEEEECTT----TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eEE--CC--EEEEEcCCCeEEEEECCCCcEEEeeccc----CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 332 33 4555667889999998776432111100 0111112222 246788888999999999999887665
Q ss_pred ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188 433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 467 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 467 (504)
....... ....... .+..|+.++.+|.|+.|+
T Consensus 344 ~~~~~~~-~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 344 QKVDSSG-FQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECCTTC-BCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EecCCCc-ceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 5542211 1111122 256788888999999887
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=1e-10 Score=106.91 Aligned_cols=233 Identities=10% Similarity=0.082 Sum_probs=144.2
Q ss_pred EEC--CCCCEEEEE-eCCCcEEEEECCCC----eEEEeec-------CCCCCeEEEEEccCCCEEEEEcCC------CeE
Q psy17188 210 AIS--PDSKVCFSC-CSDGNIAVWDLHNQ----TLVRQFQ-------GHTDGASCIDISADGTKLWTGGLD------NTV 269 (504)
Q Consensus 210 ~~s--~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~d------g~i 269 (504)
.++ +++++|++. ..++.|.++|+.+. +.++++. ........+...|+| .++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 777766654 46788999999765 6777663 112245667889999 77766555 789
Q ss_pred EEEECCCCceEEEeecCCCCCCCcccceec-ccCCceEEEEEcCCCCEEEEEe-------------------CCCcEEEE
Q psy17188 270 RSWDLREGCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLPDGRTLIVGG-------------------EASNLSIW 329 (504)
Q Consensus 270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-------------------~dg~i~v~ 329 (504)
.++|.++.++.- ..... .....-..+-|+|+++.+++.. .+.+|.+|
T Consensus 167 ~vlD~~T~~v~~-------------~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 167 LMLDHYSFEPLG-------------KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EEECTTTCCEEE-------------ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred EEEECCCCeEEE-------------EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 999999887532 11101 1112234678899999888874 36789999
Q ss_pred eCCCCCccceeeeccCCCceeeEEE--CCCCCCceeeecc-----CCCeEEEEecCCCCCCCccccc--cc---------
Q psy17188 330 DLASPTPRIKAELTSSAPACYALAI--SPDSKSPFFSSHH-----YKSCVKVWDISQPGSKTPVSQL--DC--------- 391 (504)
Q Consensus 330 d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~-----~~~~i~i~d~~~~~~~~~~~~~--~~--------- 391 (504)
|+.+.+......+.........+.| +|+++. .+++.. .+++|.+|..+.+ ........ ..
T Consensus 234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~-aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 234 DLRKRKRIHSLTLGEENRMALELRPLHDPTKLM-GFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp ETTTTEEEEEEESCTTEEEEEEEEECSSTTCCE-EEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCG
T ss_pred ECCCCcEeeEEecCCCCCccceeEeeECCCCCE-EEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCccccccccc
Confidence 9997643333333212234455555 999986 444444 6777876655431 10000000 00
Q ss_pred -----ccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCCC-CcceeecccCC-----------C---CceeEEEECCC
Q psy17188 392 -----LQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASP-TPRIKAELTSS-----------A---PACYALAISPD 450 (504)
Q Consensus 392 -----~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~-~~~~~~~~~~~-----------~---~~v~~l~~s~~ 450 (504)
.........+.+|+||++|+++.. .+.|.+||+... +.......... . ..-..++++||
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD 391 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD 391 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC
Confidence 000245678999999999998876 578999998633 22222222111 0 12466799999
Q ss_pred CCEEEEee
Q psy17188 451 SKVCFSCC 458 (504)
Q Consensus 451 ~~~l~s~~ 458 (504)
|++|+++.
T Consensus 392 Gk~LyVaN 399 (462)
T 2ece_A 392 GRRVYVTN 399 (462)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999887
No 233
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=3.2e-08 Score=101.42 Aligned_cols=407 Identities=11% Similarity=0.044 Sum_probs=232.1
Q ss_pred CcceEEEECCCCC-cccCCCCCCcccCCCCCccccceeeec---------CCCcEEEEEEcC--CCcEEEEecCCeEEEE
Q psy17188 72 KPAYSYHVTTDGQ-MQPVPFPPDALIGPGIPRHARQINTLS---------HGEVVCAVTISN--PTKYVYTGGKGCVKVW 139 (504)
Q Consensus 72 ~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~V~~v~~s~--~~~~l~~~~d~~i~vw 139 (504)
..|.++...++|. +- ++...+.+..++.... ....+. ....|.++.... ++.+.+...++.|..|
T Consensus 66 n~I~~i~~d~~g~~lW-igt~~~Gl~~~d~~~~--~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~ 142 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIW-IATQRAGLNAYNYETQ--SFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYL 142 (781)
T ss_dssp SCEEEEEECSSSSEEE-EEESSSCEEEEETTTT--EEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEE
T ss_pred cccceEEEcCCCCEEE-EEeCCCCcceECCCCC--eEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEE
Confidence 4577887777776 43 3444434554443211 111111 124689999888 8887776546668889
Q ss_pred eCCCCCCCCceeeeeec----CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee-----ecCcCceEEEE
Q psy17188 140 DISQPGSKTPVSQLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----TSSAPACYALA 210 (504)
Q Consensus 140 ~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~~~v~~~~ 210 (504)
|.+++. +..+... -....|.++...+++.+.+ ++.++-|..||..+.+....... ......|.++.
T Consensus 143 ~~~~~~----~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 217 (781)
T 3v9f_A 143 DIATGK----FTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIY 217 (781)
T ss_dssp ETTTTE----EEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEE
T ss_pred ECCCCe----EEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEE
Confidence 876531 1111110 1134688888877776554 55555688899776542211100 01134588998
Q ss_pred ECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 211 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
..+++.+.+ ++.+ -+.+||..+++....... ....|.++...++|. |..|+..+-|.++|..++....+.
T Consensus 218 ~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~ 294 (781)
T 3v9f_A 218 KDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPE 294 (781)
T ss_dssp ECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC------
T ss_pred EcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeee
Confidence 888887555 4445 599999887765432211 245689998888774 556666566888998877643221
Q ss_pred ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee-------eccCCCceeeEEECC
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-------LTSSAPACYALAISP 356 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-------~~~~~~~i~~~~~~~ 356 (504)
...-..... ...........|.++...++|. |.+|+.++-|..++........... .......|.++...+
T Consensus 295 ~~~f~~~~~-~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 372 (781)
T 3v9f_A 295 QIRFEFIRE-GDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG 372 (781)
T ss_dssp ---CEEECB-CSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT
T ss_pred ccccccccC-CCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC
Confidence 100000000 0000112345689999999887 6667767778888877553222211 111234688888877
Q ss_pred CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188 357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 436 (504)
Q Consensus 357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 436 (504)
++. +..+..++-+..||........ .. .........|.++...++|.+. +|+.++.|..++..+++........
T Consensus 373 ~g~---lWigt~~~Gl~~~~~~~~~~~~-~~-~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~ 446 (781)
T 3v9f_A 373 QGK---LWIGTDGGGINVFENGKRVAIY-NK-ENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIELEK 446 (781)
T ss_dssp TSC---EEEEEBSSCEEEEETTEEEEEC-C------CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECCSTT
T ss_pred CCC---EEEEeCCCcEEEEECCCCeEEE-cc-CCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEeccCC
Confidence 765 4455555668888865421110 00 0001234668899998888754 4666667999988765432221111
Q ss_pred CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec-----CCceEEEEEccCCCEEEEe
Q psy17188 437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-----TDGASCIDISADGTKLWTG 499 (504)
Q Consensus 437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~~~~s~d~~~l~s~ 499 (504)
.....|.++...+++++.+. +. +-|.+||..+++........ ...|.++...++|+..+..
T Consensus 447 ~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 447 NELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp TCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE
Confidence 23456888888888875554 44 45899998877654332212 3568999998888765543
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.35 E-value=1.9e-10 Score=114.96 Aligned_cols=272 Identities=10% Similarity=0.093 Sum_probs=164.4
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCccceeeee-cCc--CceEE-EEECCCCCEEEEEeC------CCcEEEEECCCCeEEE
Q psy17188 170 DGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSA--PACYA-LAISPDSKVCFSCCS------DGNIAVWDLHNQTLVR 239 (504)
Q Consensus 170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~--~~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~ 239 (504)
++..|++++.|+.|..+|..+++........ ... ..+.. ... .+..+++++. ++.|+.+|.++|+.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 4667888888999999999988765444332 100 11111 111 2335555543 6899999999999988
Q ss_pred eecCCCCC--------------------------------eEEEEEccCCCEEEEEcCCC-------------------e
Q psy17188 240 QFQGHTDG--------------------------------ASCIDISADGTKLWTGGLDN-------------------T 268 (504)
Q Consensus 240 ~~~~h~~~--------------------------------v~~~~~~~~~~~l~s~~~dg-------------------~ 268 (504)
.+...... ...++++|++.+++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 77542211 13567888888888887664 5
Q ss_pred EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188 269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLSIWDLASPTPRIKAELTSS 345 (504)
Q Consensus 269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 345 (504)
|..+|.++|+. +|.......... . ........-+....+| +.+++++.+|.++++|.++++......+...
T Consensus 285 v~AlD~~TG~~-~W~~~~~~~d~w----d-~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 358 (677)
T 1kb0_A 285 IVALDPDTGKY-KWHYQETPGDNW----D-YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPV 358 (677)
T ss_dssp EEEECTTTCCE-EEEEESSTTCCS----C-CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred EEEEECCCCCE-EEEEecCCCccc----c-cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccccc
Confidence 99999999985 454432211000 0 0001122223333467 6788999999999999998865433332110
Q ss_pred C---------Cce------------------------eeEEECCCCCCceeeecc-------------------------
Q psy17188 346 A---------PAC------------------------YALAISPDSKSPFFSSHH------------------------- 367 (504)
Q Consensus 346 ~---------~~i------------------------~~~~~~~~~~~~~~~~~~------------------------- 367 (504)
. ..+ ..++++|+....++.+..
T Consensus 359 ~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 438 (677)
T 1kb0_A 359 NWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT 438 (677)
T ss_dssp SSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred CcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccc
Confidence 0 000 146777777642222110
Q ss_pred ----------------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188 368 ----------------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 368 ----------------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~ 431 (504)
..+.|..||+.+++..-... +...+....+..++.++++++.||.+++||.++++.+.
T Consensus 439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccccccCCCCCccEEEEEeCCCCcEEeecC------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 12778889987654322211 12233345566678889999999999999999998877
Q ss_pred eecccCCCCceeEEEECCCCCEEEE
Q psy17188 432 KAELTSSAPACYALAISPDSKVCFS 456 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~s 456 (504)
........ ...-+.+..+|+.+++
T Consensus 513 ~~~~~~~~-~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 513 EAPTGTGV-VAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEECSSCC-CSCCEEEEETTEEEEE
T ss_pred eeeCCCCc-ccCCEEEEeCCEEEEE
Confidence 76654322 2233467778875443
No 235
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=8.9e-08 Score=98.14 Aligned_cols=400 Identities=11% Similarity=0.112 Sum_probs=231.8
Q ss_pred CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeec---------CCCcEEEEEEcCCCcEEEEecCCeEEEEeCC
Q psy17188 72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLS---------HGEVVCAVTISNPTKYVYTGGKGCVKVWDIS 142 (504)
Q Consensus 72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~ 142 (504)
..|.++...++|.+.... .. .++.++.... ....+. ....|.++...++|.+.+....+-|.+++..
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~--~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTE--TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTT--EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETT
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCC--cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCC
Confidence 356666666666544332 22 4554432211 111111 2457999999999988776665678889987
Q ss_pred CCCCCCcee-------ee--eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceee-------eecCcCce
Q psy17188 143 QPGSKTPVS-------QL--DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-------LTSSAPAC 206 (504)
Q Consensus 143 ~~~~~~~~~-------~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~~~~~v 206 (504)
+........ .. ...-....|.++...++|. |..|+.++-|..++........... .......|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 643211110 00 0011346799999998887 5556667778999877554322110 01123568
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 207 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
.++...+++. |..|+.++-|..||..+++..... ......|.++...+++. |..|+.++-|..+|..+++...+.
T Consensus 366 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 366 SSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECC
T ss_pred EEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEec
Confidence 9999888776 455666667999998765433211 12346789998887775 455777677999998887754321
Q ss_pred ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec---cCCCceeeEEECCCCCC
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---SSAPACYALAISPDSKS 360 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~ 360 (504)
.. ......|.++...++++ |.+++. +-+..||..+.+........ .....+.++...+++.
T Consensus 444 ~~-------------~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~- 507 (781)
T 3v9f_A 444 LE-------------KNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR- 507 (781)
T ss_dssp ST-------------TTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-
T ss_pred cC-------------CCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-
Confidence 10 11245688898888876 555555 55888998765433222111 1134678888888776
Q ss_pred ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-CC
Q psy17188 361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SA 439 (504)
Q Consensus 361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~ 439 (504)
+.+ +...+-+..||....... .... ........|.++...++|.+.+. +.+|.+..||..+.+........+ ..
T Consensus 508 -lWi-gt~~~Gl~~~~~~~~~~~-~~~~-~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~~~~~~~gl~~ 582 (781)
T 3v9f_A 508 -FWI-GTFGGGVGIYTPDMQLVR-KFNQ-YEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQVFQRKEGLPN 582 (781)
T ss_dssp -EEE-EESSSCEEEECTTCCEEE-EECT-TTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCCCEEECGGGTCSC
T ss_pred -EEE-EEcCCCEEEEeCCCCeEE-EccC-CCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCcEEEccccCCCCC
Confidence 333 444344666776543110 0100 01112456889999999885554 446654899987665332222111 22
Q ss_pred CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC------ceEEEEEccCCCEEEEecCCC
Q psy17188 440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD------GASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~~~~s~d~~~l~s~s~Dg 503 (504)
..|.++...++|++.+++ .+| |..++.++++. ..+....+ ...++...++|++++ |+.+|
T Consensus 583 ~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~-~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~G 648 (781)
T 3v9f_A 583 THIRAISEDKNGNIWAST-NTG-ISCYITSKKCF-YTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSING 648 (781)
T ss_dssp CCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEE-EEECGGGTCCSSCEEEEEEEECTTSCEEE-EETTE
T ss_pred ceEEEEEECCCCCEEEEc-CCc-eEEEECCCCce-EEecccCCccccccccCceEECCCCEEEE-ECCCc
Confidence 357788899888876654 555 77888776543 33432111 234667778887655 44443
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.31 E-value=1.6e-10 Score=105.59 Aligned_cols=301 Identities=12% Similarity=0.109 Sum_probs=178.1
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188 118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 197 (504)
Q Consensus 118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 197 (504)
+..+..++.+.+.+.++.|..|| .+++.. .... .....+.++...+++. |..++.+ |..+|. +++.....
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~---~~~~--~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVK---WFFK--SGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF 93 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEE---ESSC--GGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEE---EEEe--cCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE
Confidence 34555677766655588899999 664321 1111 1233456777776665 5555544 888885 33332222
Q ss_pred eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188 198 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG 277 (504)
Q Consensus 198 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~ 277 (504)
... ........+. +..+..++.++.|..+|.. ++.......+...+.++...+++. ++.++.++.|..+|.. +
T Consensus 94 ~~~--~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 94 DTK--KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp CC-------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S
T ss_pred ECC--CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C
Confidence 221 1112222232 4467778888999999988 777777665666667777777775 6667888999999998 5
Q ss_pred ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC
Q psy17188 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD 357 (504)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~ 357 (504)
+. .|... .....+.++...+++. +.+++ +.+..+| .+++ ...........+.++...++
T Consensus 167 ~~-~~~~~--------------~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~--~~~~~~~~~~~~~~~~~~~~ 225 (330)
T 3hxj_A 167 TE-KWRFK--------------TNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGT--EKWNFYAGYWTVTRPAISED 225 (330)
T ss_dssp CE-EEEEE--------------CSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSC--EEEEECCSSCCCSCCEECTT
T ss_pred CE-eEEEe--------------cCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCc--EEEEEccCCcceeceEECCC
Confidence 53 22221 1123355666777777 44454 7899999 5543 23333334456778888887
Q ss_pred CCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC
Q psy17188 358 SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS 437 (504)
Q Consensus 358 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 437 (504)
+. +..++.++.+..+|... .. ..... .....+..+.+.+++ .|.+++.+|.|..+|. +++.......
T Consensus 226 g~---l~v~t~~~gl~~~~~~g-~~---~~~~~--~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~-- 292 (330)
T 3hxj_A 226 GT---IYVTSLDGHLYAINPDG-TE---KWRFK--TGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFET-- 292 (330)
T ss_dssp SC---EEEEETTTEEEEECTTS-CE---EEEEE--CSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEEC--
T ss_pred Ce---EEEEcCCCeEEEECCCC-CE---eEEee--CCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEc--
Confidence 75 44455567777776422 11 11111 112223345566566 4667778888999996 5554444433
Q ss_pred CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 438 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 438 ~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
....+.++...+++++ ..++.+|.+++...+.
T Consensus 293 ~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 293 GSWIIATPVIDENGTI-YFGTRNGKFYALFNLE 324 (330)
T ss_dssp SSCCCSCCEECTTCCE-EEECTTSCEEEEEC--
T ss_pred CCccccceEEcCCCEE-EEEcCCCeEEEEeccc
Confidence 2344666677777764 5578899999887654
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.31 E-value=1.8e-12 Score=119.91 Aligned_cols=206 Identities=12% Similarity=0.088 Sum_probs=114.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188 214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293 (504)
Q Consensus 214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 293 (504)
++..+++++.|+.|+.||..+|+.+.++.. +.+.+..+..++..+++++.|+.|+.||..+|+.. |.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~-w~~~~~------ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL-TKLPFT------ 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS-EECSCC------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee-eeeecc------
Confidence 567899999999999999999999988875 55555556667778888899999999999887631 111100
Q ss_pred ccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK 373 (504)
Q Consensus 294 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~ 373 (504)
........++ +. ++..+++++.++.++.||.++++........
T Consensus 79 --~~~~~~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~------------------------------ 121 (369)
T 2hz6_A 79 --IPELVQASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA------------------------------ 121 (369)
T ss_dssp --HHHHHTTCSC----C------CCCCEEEEEEEEECCC-----------------------------------------
T ss_pred --CccccccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC------------------------------
Confidence 0000000000 01 2345666667777888877766422111100
Q ss_pred EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC--
Q psy17188 374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-- 451 (504)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~-- 451 (504)
. ...++|++..+++++.++.|+.||.++++.+........ ....+..+.
T Consensus 122 ---------------------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~ 172 (369)
T 2hz6_A 122 ---------------------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDY 172 (369)
T ss_dssp ------------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTC
T ss_pred ---------------------C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccc
Confidence 0 112334677888888889999999988876655443221 122334432
Q ss_pred -CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceE-EEEEccCCCE
Q psy17188 452 -KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTK 495 (504)
Q Consensus 452 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~s~d~~~ 495 (504)
..+++++.||.|+.||..+|+.+.+... ..++. ...+++||..
T Consensus 173 ~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 173 KMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLR 217 (369)
T ss_dssp CCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCE
T ss_pred cceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceE
Confidence 5577788999999999999999887763 44443 3455667643
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=3.3e-10 Score=103.41 Aligned_cols=291 Identities=14% Similarity=0.144 Sum_probs=174.9
Q ss_pred EEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC
Q psy17188 165 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244 (504)
Q Consensus 165 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 244 (504)
.....++. |..++.++.|..|| .+++.... .......+.++...+++. |..++.+ |..+|. +++.+..+...
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~--~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~ 96 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWF--FKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTK 96 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEES--SCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEE--EecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECC
Confidence 34444554 66677788899999 66554222 223334456777776765 5555544 888885 66655555433
Q ss_pred CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC
Q psy17188 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 324 (504)
Q Consensus 245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 324 (504)
........+. +..|..++.++.|..+|.. ++. .|.... ....+.++...++++ +++++.++
T Consensus 97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~-~~~~~~--------------~~~~~~~~~~~~~g~-l~vgt~~~ 157 (330)
T 3hxj_A 97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTE-KWRFKT--------------KKAIYATPIVSEDGT-IYVGSNDN 157 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCE-EEEEEC--------------SSCCCSCCEECTTSC-EEEECTTS
T ss_pred CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCE-EEEEcC--------------CCceeeeeEEcCCCE-EEEEcCCC
Confidence 3323333333 4477888889999999988 653 333221 122344556666776 66677889
Q ss_pred cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 404 (504)
Q Consensus 325 ~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s 404 (504)
.+..+|.. ++... ........+..+...+++. +++.. +.+..+| ..+... . ........+.++...
T Consensus 158 ~l~~~d~~-g~~~~--~~~~~~~~~~~~~~d~~g~--l~v~t---~~l~~~d-~~g~~~---~--~~~~~~~~~~~~~~~ 223 (330)
T 3hxj_A 158 YLYAINPD-GTEKW--RFKTNDAITSAASIGKDGT--IYFGS---DKVYAIN-PDGTEK---W--NFYAGYWTVTRPAIS 223 (330)
T ss_dssp EEEEECTT-SCEEE--EEECSSCCCSCCEECTTCC--EEEES---SSEEEEC-TTSCEE---E--EECCSSCCCSCCEEC
T ss_pred EEEEECCC-CCEeE--EEecCCCceeeeEEcCCCE--EEEEe---CEEEEEC-CCCcEE---E--EEccCCcceeceEEC
Confidence 99999987 53322 3333344566777766765 44433 7788888 432211 1 111223456788888
Q ss_pred CCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce
Q psy17188 405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA 484 (504)
Q Consensus 405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v 484 (504)
++|. |.+++.++.|..+|. +++....... ....+..+.+.++++ |..++.+|.|..+|. +++.+..+......+
T Consensus 224 ~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~ 297 (330)
T 3hxj_A 224 EDGT-IYVTSLDGHLYAINP-DGTEKWRFKT--GKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWII 297 (330)
T ss_dssp TTSC-EEEEETTTEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCC
T ss_pred CCCe-EEEEcCCCeEEEECC-CCCEeEEeeC--CCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccc
Confidence 8875 555667788888874 3443333322 222233446665664 556777888999995 788777776556667
Q ss_pred EEEEEccCCCEEEEecCCC
Q psy17188 485 SCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 485 ~~~~~s~d~~~l~s~s~Dg 503 (504)
.++...++|+ |..++.+|
T Consensus 298 ~~~~~d~~g~-l~~gt~~G 315 (330)
T 3hxj_A 298 ATPVIDENGT-IYFGTRNG 315 (330)
T ss_dssp SCCEECTTCC-EEEECTTS
T ss_pred cceEEcCCCE-EEEEcCCC
Confidence 7888878876 45577666
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=1.4e-09 Score=108.54 Aligned_cols=321 Identities=12% Similarity=0.101 Sum_probs=186.6
Q ss_pred CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--------ce-EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--------AC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 241 (504)
+..|++++.++.|..+|..+++............ .+ ..+++ .+..+++++.|+.|..+|.++|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 4456666667788888888776544333221100 00 11222 3457888889999999999999998887
Q ss_pred cCCC----CCeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCC-CCCCc---ccc----------
Q psy17188 242 QGHT----DGASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPG-SKTPV---SQL---------- 296 (504)
Q Consensus 242 ~~h~----~~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~-~~~~~---~~~---------- 296 (504)
.... ..+.+ ..+. ++ .++.+.. +|.|..+|.++|+. +|...... ..... ..+
T Consensus 144 ~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKL-AWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCE-EEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred ccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcE-EEEecccCCCCCccccccccccccccCCcc
Confidence 6421 11111 1111 34 5555543 58999999999985 46554311 10000 000
Q ss_pred ---eecccCCceEEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCCccceeeeccCC-------C
Q psy17188 297 ---DCLQRDNYIRSVKLLPDGRTLIVGGEASN-------------------LSIWDLASPTPRIKAELTSSA-------P 347 (504)
Q Consensus 297 ---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~v~d~~~~~~~~~~~~~~~~-------~ 347 (504)
...........++++++...++++..++. |..+|.++++.........+. .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~ 300 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ 300 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence 00011122235788898888988877663 999999998766555544332 1
Q ss_pred ceeeEEECCCCC-CceeeeccCCCeEEEEecCCCCCCCcccccc-----cc---------------cC-----------C
Q psy17188 348 ACYALAISPDSK-SPFFSSHHYKSCVKVWDISQPGSKTPVSQLD-----CL---------------QR-----------D 395 (504)
Q Consensus 348 ~i~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----~~---------------~~-----------~ 395 (504)
+.....+..+++ ..+++.++.+|.+.++|..+++......... .. .. .
T Consensus 301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 222222223443 1257788899999999988765331110000 00 00 0
Q ss_pred CceEEEEEcCCCCEEEEee------------------------------------CCCcEEEeeCCCCCcceeecccCCC
Q psy17188 396 NYIRSVKLLPDGRTLIVGG------------------------------------EASNLSIWDLASPTPRIKAELTSSA 439 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l~~~~------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (504)
..-..++++|+..++++.. .+|.|..||+.+++.+........
T Consensus 381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~- 459 (668)
T 1kv9_A 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH- 459 (668)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-
T ss_pred cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-
Confidence 0011367888777666421 237799999999887666554322
Q ss_pred CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce-EEEEEccCCC-EEEEe
Q psy17188 440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISADGT-KLWTG 499 (504)
Q Consensus 440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~s~d~~-~l~s~ 499 (504)
.....+...+.++++++.||.++.||.++|+.+.+++...... .-+.+..+|+ +++.+
T Consensus 460 --~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 460 --WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp --CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred --CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEE
Confidence 2222444568899999999999999999999999887543211 2344455665 44433
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=7.4e-10 Score=105.07 Aligned_cols=243 Identities=11% Similarity=0.084 Sum_probs=155.4
Q ss_pred CCCCEEEEEeC-CCcEEEEECCCCeEEEeecC-CCCCeEEEEE-c-cCCCEEEEEc------------------CCCeEE
Q psy17188 213 PDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQG-HTDGASCIDI-S-ADGTKLWTGG------------------LDNTVR 270 (504)
Q Consensus 213 ~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i~ 270 (504)
+||++|+.... +..|.+.|+++.++...+.- ....+..+++ . |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 37888877765 45699999999998885542 2345788888 4 8999998884 345789
Q ss_pred EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC--------------------------
Q psy17188 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-------------------------- 324 (504)
Q Consensus 271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------------- 324 (504)
++|..+.++. |. +. -......++++|+|+++++.+.+.
T Consensus 179 vID~~t~~v~-~q------------I~---Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 179 AVDADKWEVA-WQ------------VL---VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp EEETTTTEEE-EE------------EE---ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred EEECCCCeEE-EE------------EE---eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence 9999887642 21 11 111345677889999888887543
Q ss_pred ------------cEEEEeCCCCCccc-eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC------CCCc
Q psy17188 325 ------------NLSIWDLASPTPRI-KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG------SKTP 385 (504)
Q Consensus 325 ------------~i~v~d~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~------~~~~ 385 (504)
.+.+.|.++.+... ...+.. .....++.++||++. +++++..+..|.++|+.+.. ....
T Consensus 243 ~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~-v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 243 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKH-LCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSE-EEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred EeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCE-EEEeCCCCCeEEEEECcccccccccccCcc
Confidence 36666666521111 222222 225678999999997 77788889999999998531 1111
Q ss_pred ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC--------cceeecccCCCCc-----eeEEEECCCCC
Q psy17188 386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT--------PRIKAELTSSAPA-----CYALAISPDSK 452 (504)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~-----v~~l~~s~~~~ 452 (504)
........-......++|+|+|....+...|++|.+||+.+.. ......+..+..+ -..+.++|||+
T Consensus 321 ~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 321 SAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp GGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred cceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 1111222345567899999999444456678999999987610 1122222222221 12235689999
Q ss_pred EEEEeeC---CCc----------EEEEEcCCcce
Q psy17188 453 VCFSCCS---DGN----------IAVWDLHNQTL 473 (504)
Q Consensus 453 ~l~s~~~---dg~----------i~iwd~~~~~~ 473 (504)
+|++... |+. -.++|+..+++
T Consensus 401 ~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 401 WLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp EEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred EEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 9998864 432 28899976553
No 241
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.21 E-value=6.6e-09 Score=101.33 Aligned_cols=319 Identities=12% Similarity=0.110 Sum_probs=181.4
Q ss_pred CCEEEEecC-CCcEEEEeC-CCCCccceeeeecCcC---------ceEEEEECCCCCE----EEEEeCCCcEEEEECCCC
Q psy17188 171 GRTLIVGGE-ASNLSIWDL-ASPTPRIKAELTSSAP---------ACYALAISPDSKV----CFSCCSDGNIAVWDLHNQ 235 (504)
Q Consensus 171 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~----l~~~~~dg~i~iwd~~~~ 235 (504)
+..|++++. ++.|.-+|. .+++............ ....++++|.+.. +++++.|+.|..+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345555555 677888888 7776544433322110 0123455443334 888889999999999999
Q ss_pred eEEEeecCCCC----CeEE-EEEccCCCEEEEEc------CCCeEEEEECCCCceEEEeecCCCCCCCc-----------
Q psy17188 236 TLVRQFQGHTD----GASC-IDISADGTKLWTGG------LDNTVRSWDLREGCVKVWDISQPGSKTPV----------- 293 (504)
Q Consensus 236 ~~~~~~~~h~~----~v~~-~~~~~~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~----------- 293 (504)
+.+........ .+.+ ..+. ++ .++.++ .++.|+.+|.++|+. +|...........
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~-~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQ-VWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCE-EEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcE-EEEEcCCCCccccccccccccccc
Confidence 99877653220 1211 1111 34 555554 489999999999985 4554433211000
Q ss_pred -------------ccceecccCCceEEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCCccceeeecc
Q psy17188 294 -------------SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------------SNLSIWDLASPTPRIKAELTS 344 (504)
Q Consensus 294 -------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~ 344 (504)
...........-..+++.++...++.+..+ +.|..+|.++++.....+...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 000000000011245677777888887665 379999999987665555544
Q ss_pred CCC-------ceeeEEEC-CCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccc-------cc-cCC------------
Q psy17188 345 SAP-------ACYALAIS-PDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLD-------CL-QRD------------ 395 (504)
Q Consensus 345 ~~~-------~i~~~~~~-~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------~~-~~~------------ 395 (504)
+.. ...-+... .+++. .+++.++.+|.+.++|.++++......... .. ...
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 321 11112221 34521 256778889999999987764322111100 00 000
Q ss_pred --------------CceEEEEEcCCCCEEEEee---------------------------------------CCCcEEEe
Q psy17188 396 --------------NYIRSVKLLPDGRTLIVGG---------------------------------------EASNLSIW 422 (504)
Q Consensus 396 --------------~~i~~~~~s~~g~~l~~~~---------------------------------------~dg~i~iw 422 (504)
..-..++++|+..++++.. ..|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 0112466777766665431 34678999
Q ss_pred eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCCE
Q psy17188 423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTK 495 (504)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~~ 495 (504)
|+.+++.+........ ...-.+...+.+++.++.||.++.||.++|+++.+++..... ..-+.+..||+.
T Consensus 459 D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 459 NAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ECCCCCEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 9998887666543321 111112235678888999999999999999999988744322 223556677764
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.21 E-value=1.1e-08 Score=99.91 Aligned_cols=320 Identities=13% Similarity=0.108 Sum_probs=180.5
Q ss_pred CCEEEEecC-CCcEEEEeC-CCCCccceeeeecCcC--------c-eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188 171 GRTLIVGGE-ASNLSIWDL-ASPTPRIKAELTSSAP--------A-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 239 (504)
Q Consensus 171 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~--------~-v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 239 (504)
+..+++++. ++.|.-+|. .+++......+..... . ...++. ++..+++++.|+.|..+|.++++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 344555555 677888888 7776544433322110 0 011222 34578888889999999999999888
Q ss_pred eecCCCC----CeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCCCCC-----C-------c---
Q psy17188 240 QFQGHTD----GASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPGSKT-----P-------V--- 293 (504)
Q Consensus 240 ~~~~h~~----~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~-----~-------~--- 293 (504)
++..... .+.+ .... ++ .++.++. ++.|..+|.++|+. +|......... + .
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGEL-KWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCE-EEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcE-EEEEccCCCccccccCcccccccccccc
Confidence 7653220 1211 1111 34 5555554 79999999999984 55544322110 0 0
Q ss_pred ---------ccceecccCCceEEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCCccceeeeccCCC-
Q psy17188 294 ---------SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------------SNLSIWDLASPTPRIKAELTSSAP- 347 (504)
Q Consensus 294 ---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~~~- 347 (504)
..............+++.++...++.+..+ +.|..+|.++++.....+...+..
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 000000001111245677777777776542 258999999887655554433211
Q ss_pred ------ceeeEEECCCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccccc--------cCCCc---------------
Q psy17188 348 ------ACYALAISPDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--------QRDNY--------------- 397 (504)
Q Consensus 348 ------~i~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~--------------- 397 (504)
...-+....+++. .+++.+..++.+.++|..+++........... ....+
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 1111222235531 14666778899999998776432211100000 00000
Q ss_pred -----------eEEEEEcCCCCEEEEee-------------------------------------CCCcEEEeeCCCCCc
Q psy17188 398 -----------IRSVKLLPDGRTLIVGG-------------------------------------EASNLSIWDLASPTP 429 (504)
Q Consensus 398 -----------i~~~~~s~~g~~l~~~~-------------------------------------~dg~i~iwd~~~~~~ 429 (504)
-..++++|+..++++.. .+|.|..||..+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 12467888877777653 347899999999887
Q ss_pred ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCCEEEE
Q psy17188 430 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTKLWT 498 (504)
Q Consensus 430 ~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~~l~s 498 (504)
+......... ....+...+..++.++.||.|+.||.++|+++.+++..... -..+.+..+|+.++.
T Consensus 457 ~W~~~~~~~~---~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 457 KWTKWEKFAA---WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEEEESSCC---CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEecCCCCc---cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 7665543321 11122334677888999999999999999999988743321 122345577765443
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.18 E-value=5.7e-08 Score=85.48 Aligned_cols=251 Identities=15% Similarity=0.094 Sum_probs=148.0
Q ss_pred CEEEEecCCCcEEEEeCCCCCccc---eeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEeecCCCCC
Q psy17188 172 RTLIVGGEASNLSIWDLASPTPRI---KAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDG 247 (504)
Q Consensus 172 ~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~ 247 (504)
.+|+.+.. +.|+.++++...... ...+......+..++|++++..|+.+. .++.|..+++........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555543 478888887644221 111222233467899999766555544 5678999998766544334333357
Q ss_pred eEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---
Q psy17188 248 ASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--- 323 (504)
Q Consensus 248 v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 323 (504)
...+++++++..| ++-...+.|.+++++....... ..........++++|++..|+.+...
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~---------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~ 145 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL---------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDN 145 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---------------ECSSCSSEEEEEEETTTTEEEEEECCSSS
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE---------------EECCCCCccEEEEeeCCCEEEEEECCCCC
Confidence 7899999975554 4555667899999875432111 01112456889999976666665432
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 403 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~ 403 (504)
+.|..+++...... .+. . ........+++
T Consensus 146 ~~I~~~~~dg~~~~------------------------~~~-----------~----------------~~~~~P~gia~ 174 (267)
T 1npe_A 146 PKIETSHMDGTNRR------------------------ILA-----------Q----------------DNLGLPNGLTF 174 (267)
T ss_dssp CEEEEEETTSCCCE------------------------EEE-----------C----------------TTCSCEEEEEE
T ss_pred cEEEEEecCCCCcE------------------------EEE-----------E----------------CCCCCCcEEEE
Confidence 45655554321100 000 0 00122447888
Q ss_pred cCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEcCCcceEEEEeecC
Q psy17188 404 LPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHT 481 (504)
Q Consensus 404 s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~ 481 (504)
++++..|+.+. ..+.|..+|........... . ......++.. +..|..+. .++.|.++|..+++.+..+....
T Consensus 175 d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~ 249 (267)
T 1npe_A 175 DAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--G-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK 249 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--C-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS
T ss_pred cCCCCEEEEEECCCCEEEEEecCCCceEEEec--C-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc
Confidence 88766665544 45678888876433222221 1 1223455654 45555554 56899999999999988886443
Q ss_pred -CceEEEEEccCCC
Q psy17188 482 -DGASCIDISADGT 494 (504)
Q Consensus 482 -~~v~~~~~s~d~~ 494 (504)
.....+++.|++.
T Consensus 250 ~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 250 QTRLYGITIALSQC 263 (267)
T ss_dssp CCCCCCEEEECSCC
T ss_pred ccccceeeecCccC
Confidence 2477888988864
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.16 E-value=3.5e-08 Score=96.44 Aligned_cols=319 Identities=14% Similarity=0.077 Sum_probs=179.6
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCc-------eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPA-------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 245 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 245 (504)
.+++++.++.|.-+|..+++............. ...+++ .+..++.++.|+.|..+|.++|+.+.......
T Consensus 70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 444444434488888887775544433321110 011222 34577888899999999999999987765332
Q ss_pred C----CeE-EEEEcc---CCC-EEEEEc------CCCeEEEEECCCCceEEEeecCCCCCC--------------Ccc--
Q psy17188 246 D----GAS-CIDISA---DGT-KLWTGG------LDNTVRSWDLREGCVKVWDISQPGSKT--------------PVS-- 294 (504)
Q Consensus 246 ~----~v~-~~~~~~---~~~-~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~--------------~~~-- 294 (504)
. .+. ...+.. +++ .+++++ .++.|+.+|.++|+. +|......... ...
T Consensus 148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~-~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w 226 (582)
T 1flg_A 148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE-IWMRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE-EEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE-EeecCCCccccccccCcccccccccccccC
Confidence 1 111 111111 233 566654 378999999999985 45443221000 000
Q ss_pred --c---------ceecccCCceEEEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCCccce
Q psy17188 295 --Q---------LDCLQRDNYIRSVKLLPDGRTLIVGGE--------------------A----SNLSIWDLASPTPRIK 339 (504)
Q Consensus 295 --~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------d----g~i~v~d~~~~~~~~~ 339 (504)
. .........-..++++|+...++++.. | +.|..+|.++++....
T Consensus 227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~ 306 (582)
T 1flg_A 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF 306 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred CCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEE
Confidence 0 000001111135677888788887763 2 5799999999876666
Q ss_pred eeeccCCC-------ceeeEEEC-CCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccc--------------------
Q psy17188 340 AELTSSAP-------ACYALAIS-PDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLD-------------------- 390 (504)
Q Consensus 340 ~~~~~~~~-------~i~~~~~~-~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------------------- 390 (504)
.+...+.. ...-+... .+++. .+++.++.+|.+.++|.++++.........
T Consensus 307 ~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~ 386 (582)
T 1flg_A 307 YQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREG 386 (582)
T ss_dssp EESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTT
T ss_pred EeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccc
Confidence 55543321 11111111 34531 267778899999999987654321111000
Q ss_pred cc---------cC-----------CCceEEEEEcCCCCEEEEee---------------------------------CCC
Q psy17188 391 CL---------QR-----------DNYIRSVKLLPDGRTLIVGG---------------------------------EAS 417 (504)
Q Consensus 391 ~~---------~~-----------~~~i~~~~~s~~g~~l~~~~---------------------------------~dg 417 (504)
.. .. ......++++|+..++++.. .+|
T Consensus 387 ~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G 466 (582)
T 1flg_A 387 QRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVG 466 (582)
T ss_dssp CSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSE
T ss_pred cCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcc
Confidence 00 00 00012456777665555432 257
Q ss_pred cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce-EEEEEccCCCEE
Q psy17188 418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISADGTKL 496 (504)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~s~d~~~l 496 (504)
.|..||+.+++.+......... ..-.....+.+++.++.||.++.||.++|+++.+++...+.. .-+.+..||+..
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCC---CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred eEEEEECCCCCEEEEecCCCCC---cccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 8999999999877665543221 111122246788889999999999999999999888543322 236677788643
Q ss_pred E
Q psy17188 497 W 497 (504)
Q Consensus 497 ~ 497 (504)
+
T Consensus 544 v 544 (582)
T 1flg_A 544 L 544 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.16 E-value=6.7e-10 Score=105.39 Aligned_cols=255 Identities=15% Similarity=0.155 Sum_probs=161.1
Q ss_pred CCCEEEEecC-CCcEEEEeCCCCCccceeeeecCcCceEEEEE-C-CCCCEEEEEe------------------CCCcEE
Q psy17188 170 DGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAI-S-PDSKVCFSCC------------------SDGNIA 228 (504)
Q Consensus 170 ~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~------------------~dg~i~ 228 (504)
||++|..... +..|.+.|+++.+...+..+..- .....+++ + |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 8888887654 55699999998765443344322 34678887 5 8999998885 245799
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---------------eEEEEECCC-------------CceE
Q psy17188 229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---------------TVRSWDLRE-------------GCVK 280 (504)
Q Consensus 229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---------------~i~~wd~~~-------------~~~~ 280 (504)
++|.++.+.+.++.--. ....++++|+|+++++.+.+. .|.+.|... +.+.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999999988887322 456788999999999888653 345554331 1233
Q ss_pred EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCc----------cceeeeccCCCce
Q psy17188 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP----------RIKAELTSSAPAC 349 (504)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~----------~~~~~~~~~~~~i 349 (504)
+.+....... . ............++.++|||+++++++ .+.++.++|+.+.+. ....+. .-....
T Consensus 258 VID~~~~~~~-~--~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP 333 (595)
T 1fwx_A 258 VVDGRKEASS-L--FTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGP 333 (595)
T ss_dssp EEECSGGGCC-S--SEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCE
T ss_pred EEeCcccCCc-e--eEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCc
Confidence 3333221000 0 011222334567899999999888765 567899999985421 111222 223467
Q ss_pred eeEEECCCCCCceeeeccCCCeEEEEecCCC-------CCCCcccccccccCCC---ceEEEEEcCCCCEEEEeeCC--C
Q psy17188 350 YALAISPDSKSPFFSSHHYKSCVKVWDISQP-------GSKTPVSQLDCLQRDN---YIRSVKLLPDGRTLIVGGEA--S 417 (504)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~~~~~---~i~~~~~s~~g~~l~~~~~d--g 417 (504)
..++|+++| . ++++...++.|.+||+... .....+..+......+ .-..+.++|||++|++.+.- .
T Consensus 334 ~h~aF~~dG-~-aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 334 LHTAFDGRG-N-AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EEEEECTTS-E-EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred ceEEECCCC-e-EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 899999999 3 8888889999999998751 1111122221110000 00122457999999997642 2
Q ss_pred cE-----------EEeeCCCCCccee
Q psy17188 418 NL-----------SIWDLASPTPRIK 432 (504)
Q Consensus 418 ~i-----------~iwd~~~~~~~~~ 432 (504)
.+ .++|+..++...+
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~m~lv 437 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDKMVLV 437 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSSCEEE
T ss_pred ccccCCCCCCCcceEEEcCCCcEEEE
Confidence 23 8899976655443
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.13 E-value=1.7e-11 Score=113.35 Aligned_cols=187 Identities=11% Similarity=0.069 Sum_probs=96.5
Q ss_pred CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCc
Q psy17188 125 TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA 203 (504)
Q Consensus 125 ~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 203 (504)
+..|++++ |+.|+.||.++++...... . +.+.+..+..+++.+++++.|+.|+.||.++++..........
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~-----~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~- 80 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLK-----E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP- 80 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEE-----C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEec-----C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-
Confidence 45555555 9999999998875432222 1 3444555566787888888999999999987765332222110
Q ss_pred CceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188 204 PACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW 282 (504)
Q Consensus 204 ~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 282 (504)
..+. ...+. ++..+++++.|+.|+.||.++|+.+..+..+. ...++|++..+++++.|+.|+.||.++|+. +|
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~-~W 154 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL-RW 154 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC-CC
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE-EE
Confidence 0010 01111 34467888889999999999999988877553 234566788999999999999999999873 22
Q ss_pred eecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188 283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLSIWDLASPTPRIKAE 341 (504)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~~~~~~ 341 (504)
... ... .....+..+. ..+++++.+|.++.||.++++......
T Consensus 155 ~~~------------~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 155 NAT------------YFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEE------------EEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred eEe------------ccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 211 000 1112223321 457778899999999999886544333
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.12 E-value=4.8e-09 Score=105.05 Aligned_cols=273 Identities=13% Similarity=0.176 Sum_probs=164.4
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC----------e-EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 215 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----------A-SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 215 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
+..+++++.++.|..+|.++|+.+.++...... + ..+.+ ++..++.++.|+.|..+|.++|+. +|.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~-~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQR-AWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE-EEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCE-eee
Confidence 457777888899999999999999888643221 0 11222 355888899999999999999984 455
Q ss_pred ecCC-CCCCCcccceecccCCceEEEEEcCCCCEEEEEe------CCCcEEEEeCCCCCccceeeeccC-----------
Q psy17188 284 ISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------EASNLSIWDLASPTPRIKAELTSS----------- 345 (504)
Q Consensus 284 ~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~~~~~~~~~~~----------- 345 (504)
.... ..... ......++ + .++ .++++. .++.|+.||.++++..........
T Consensus 147 ~~~~~~~~~~-----~~~~~sP~----v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~ 215 (689)
T 1yiq_A 147 VDTRADHKRS-----YTITGAPR----V-VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGM 215 (689)
T ss_dssp EECCSCTTSC-----CBCCSCCE----E-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHH
T ss_pred ecCcCCCCCC-----ccccCCcE----E-ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccc
Confidence 4432 10000 00000111 1 133 445443 368899999998875544432110
Q ss_pred ------------------CCceeeEEECCCCCCceeeeccCCC-------------------eEEEEecCCCCCCCcccc
Q psy17188 346 ------------------APACYALAISPDSKSPFFSSHHYKS-------------------CVKVWDISQPGSKTPVSQ 388 (504)
Q Consensus 346 ------------------~~~i~~~~~~~~~~~~~~~~~~~~~-------------------~i~i~d~~~~~~~~~~~~ 388 (504)
......+++.|+.. ++..+..++ .|..+|.++++..-....
T Consensus 216 ~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~--~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~ 293 (689)
T 1yiq_A 216 EIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN--LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT 293 (689)
T ss_dssp HHHHTTCCSSTHHHHCEECCCCSCEEEETTTT--EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred cccccccCCceeeecCCCCccccceeEcCCCC--EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeec
Confidence 00112567777766 444454444 489999887654322221
Q ss_pred cccc----cCCCceEEEEEcCCCC---EEEEeeCCCcEEEeeCCCCCcceeecccC------------------------
Q psy17188 389 LDCL----QRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTS------------------------ 437 (504)
Q Consensus 389 ~~~~----~~~~~i~~~~~s~~g~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------ 437 (504)
.... .............+|+ .++.++.+|.++++|.++++.+....+..
T Consensus 294 ~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~ 373 (689)
T 1yiq_A 294 TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYW 373 (689)
T ss_dssp STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTT
T ss_pred CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhcccc
Confidence 1000 0111222222223565 78899999999999999998763322211
Q ss_pred --CCC-----------ceeEEEECCCCCEEEEeeC---------------------------------------------
Q psy17188 438 --SAP-----------ACYALAISPDSKVCFSCCS--------------------------------------------- 459 (504)
Q Consensus 438 --~~~-----------~v~~l~~s~~~~~l~s~~~--------------------------------------------- 459 (504)
... .-..++++|+..++++...
T Consensus 374 ~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~ 453 (689)
T 1yiq_A 374 KNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSW 453 (689)
T ss_dssp TSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTC
T ss_pred CCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCc
Confidence 000 0112688998888876532
Q ss_pred CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188 460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504 (504)
Q Consensus 460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt 504 (504)
+|.|+.||+.+++.+.+++.+. ++..-.++..+..++.++.||.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~ 497 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGR 497 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSE
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCc
Confidence 3779999999999998887554 3333456667888888888873
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.09 E-value=1.7e-07 Score=84.20 Aligned_cols=235 Identities=14% Similarity=0.102 Sum_probs=142.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCceEE
Q psy17188 204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCVKV 281 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~ 281 (504)
.....++|+++++++++-..++.|..||.... ....+. ....+..+++.++++++++.... ..|..+|..++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34678999999987776667889999997754 333333 34568899999999866655432 257777877877543
Q ss_pred EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee--------eeccCCCceeeEE
Q psy17188 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA--------ELTSSAPACYALA 353 (504)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--------~~~~~~~~i~~~~ 353 (504)
.... ........++..+++..+++-..++.|+++|....+..... ...........+
T Consensus 110 ~~~~--------------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 110 LLTL--------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEC--------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEeC--------------CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 2110 11122344555555544444445788999987653211110 000111233444
Q ss_pred ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433 (504)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~ 433 (504)
+++++. ++++....+.|..|++............. .......++++++|+++++....+.|.+++.. ++.....
T Consensus 175 -s~dg~~-lyv~d~~~~~I~~~~~~~~g~~~~~~~~~---~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 175 -KRFGNF-LYVSNTEKMLLLRIPVDSTDKPGEPEIFV---EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp -EEETTE-EEEEETTTTEEEEEEBCTTSCBCCCEEEE---ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred -CcCCCE-EEEEeCCCCEEEEEEeCCCCCCCccEEEe---ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 777764 66677778899999987521111111111 11234579999999887776677889999975 4432222
Q ss_pred cccCCCCceeEEEEC---CCCCEEEEeeCCC
Q psy17188 434 ELTSSAPACYALAIS---PDSKVCFSCCSDG 461 (504)
Q Consensus 434 ~~~~~~~~v~~l~~s---~~~~~l~s~~~dg 461 (504)
.........++++|. ||++.|+.++..+
T Consensus 249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 233233557899998 8888777665543
No 249
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.09 E-value=1e-05 Score=79.60 Aligned_cols=414 Identities=12% Similarity=0.064 Sum_probs=219.1
Q ss_pred CCCcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeeecC-CCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCC
Q psy17188 70 GGKPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTLSH-GEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPG 145 (504)
Q Consensus 70 ~~~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~ 145 (504)
+.+.+..+++++.+ .+.-.....+.+..............+.. -.....+++.+.++ +.++-. .+.|.+.+++...
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 34567788888644 45545555555555443332211222222 25688999998554 444544 7899999987532
Q ss_pred CCCceeeeeecCCCCceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188 146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC- 222 (504)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 222 (504)
. ..+. ...-.....|++.|.+.+|+.+.. .+.|...+++.... .............|++.+++..|+.+.
T Consensus 118 ~-~~l~----~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~~P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 118 R-KVLF----WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp C-EEEE----CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSSEEEEEEETTTTEEEEEET
T ss_pred E-EEEE----eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce--EEEEeCCCCCCcEEEEEccCCEEEEEeC
Confidence 1 1111 123345778999997666666543 45677777764332 222222344578999998766666554
Q ss_pred CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE--------------EEeec-CC
Q psy17188 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK--------------VWDIS-QP 287 (504)
Q Consensus 223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~--------------~~~~~-~~ 287 (504)
..+.|...|++.........+......++++..+ ..+++-...+.|...|..+++.. ++... .+
T Consensus 191 ~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp 269 (619)
T 3s94_A 191 KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP 269 (619)
T ss_dssp TTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSC
T ss_pred CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCC
Confidence 4677999998754433333322233456777655 45555556778999998776421 11100 00
Q ss_pred CCCCCcc------cceecccC--CceEEEE-----EcCC--------CCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188 288 GSKTPVS------QLDCLQRD--NYIRSVK-----LLPD--------GRTLIVGGEASNLSIWDLASPTPRIKAELTSSA 346 (504)
Q Consensus 288 ~~~~~~~------~~~~~~~~--~~v~~~~-----~~~~--------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 346 (504)
....+.. ...+.... ....|.+ ..++ ..+|+.+ ..+.|+..++..............-
T Consensus 270 ~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l 348 (619)
T 3s94_A 270 NATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDI 348 (619)
T ss_dssp CCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCC
T ss_pred CccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE-cccceEEEecCCCccceeEEecccc
Confidence 0000000 00000000 0111111 0111 1234444 3456777777655322211111122
Q ss_pred CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCC
Q psy17188 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLA 425 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~ 425 (504)
..+..+++.+.++. ++.+-...+.|+.++.......... ...-.....+++...+..|+ +-...+.|.+.++.
T Consensus 349 ~~~~~ld~d~~~~~-ly~sD~~~~~I~r~~~~g~~~~~v~-----~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 349 RHAIAIDYDPVEGY-IYWTDDEVRAIRRSFIDGSGSQFVV-----TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SSEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSCEEEE-----CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEEcCCCe-EEEEeCCCCeEEEEEcCCCccEEEE-----ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 35678888886554 5666666788888887653221111 11123455899987555454 44456789999987
Q ss_pred CCCcceeecccCCCCceeEEEECCCCCEEEEeeC--CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188 426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
........ .........+++.|...+|..+.. ...|...+++...........-...+.|+++++++.|+.+.
T Consensus 423 G~~~~~l~--~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD 497 (619)
T 3s94_A 423 GTMRKILI--SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGD 497 (619)
T ss_dssp SCSCEEEE--CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEE--ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEE
Confidence 54322222 223445788999997555555443 35677677653332222222334678899998777776654
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.08 E-value=1.5e-07 Score=84.54 Aligned_cols=243 Identities=12% Similarity=0.093 Sum_probs=143.3
Q ss_pred CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188 235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314 (504)
Q Consensus 235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 314 (504)
.+.+..+.. ......++|+++++++++-..++.|..||........+ .....+..++++++|
T Consensus 22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~-----------------~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHA-----------------TVEGKVSGLAFTSNG 83 (306)
T ss_dssp EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE-----------------ECSSEEEEEEECTTS
T ss_pred ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEE-----------------eCCCCceeEEEcCCC
Confidence 455555643 25678899999998777777889999999876533222 122457899999999
Q ss_pred CEEEEEeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC----c-cc
Q psy17188 315 RTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT----P-VS 387 (504)
Q Consensus 315 ~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~----~-~~ 387 (504)
+++++..... .|..+|..+++......... ......++..+++. ++++...++.|..+|........ . ..
T Consensus 84 ~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~-~~~~~g~~~~~~~~--~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 84 DLVATGWNADSIPVVSLVKSDGTVETLLTLPD-AIFLNGITPLSDTQ--YLTADSYRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTTSCEEEEEECTT-CSCEEEEEESSSSE--EEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred cEEEEeccCCcceEEEEcCCCCeEEEEEeCCC-ccccCcccccCCCc--EEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence 9666554332 46677766654332222211 12234444444433 45555567888888865321000 0 00
Q ss_pred ccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188 388 QLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 465 (504)
Q Consensus 388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i 465 (504)
.......-.....+ +++++.|+++. ..+.|..|++.. ++......+.. ......++++++|+++++....+.|.+
T Consensus 161 ~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 161 RSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVR 237 (306)
T ss_dssp CSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEE
T ss_pred cccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEE
Confidence 00000111233445 78887766654 467899999874 22111111100 123455799999998777777889999
Q ss_pred EEcCCcceEE--EEeecCCceEEEEEc---cCCCEEEEecCC
Q psy17188 466 WDLHNQTLVR--QFQGHTDGASCIDIS---ADGTKLWTGGLD 502 (504)
Q Consensus 466 wd~~~~~~~~--~~~~h~~~v~~~~~s---~d~~~l~s~s~D 502 (504)
++.. ++... .+.......++++|. +|++.|+.++..
T Consensus 238 ~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 238 IAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 9975 65532 233233568999999 898888776543
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.07 E-value=1.7e-08 Score=85.70 Aligned_cols=193 Identities=15% Similarity=0.157 Sum_probs=120.6
Q ss_pred eEEEeecCCCCCe--EEEEEccCCCEEEEEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 236 TLVRQFQGHTDGA--SCIDISADGTKLWTGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 236 ~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
+.+.++. |.... ..+.|+ ++.++.+.+.+| .|+++|+.++++.. .. ............
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~-------------~~---~l~~~~FgeGit 93 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ-------------QI---ELGKRYFGEGIS 93 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE-------------EE---ECCTTCCEEEEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE-------------EE---ecCCccceeEEE
Confidence 4556664 65444 889998 676677777766 89999999998532 11 111222222222
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188 312 PDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD 390 (504)
Q Consensus 312 ~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 390 (504)
++++.|.... .++.+.+||.++.+........ +.
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~------------~e--------------------------------- 128 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD------------GE--------------------------------- 128 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECS------------SC---------------------------------
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECC------------CC---------------------------------
Confidence 2344554443 4677888887766422211110 00
Q ss_pred cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188 391 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFSCCSDGNIAVWD 467 (504)
Q Consensus 391 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s~~~dg~i~iwd 467 (504)
...+++|++.|+.+..++.|.++|..+.+........... ..++.+.|. +|+..+..-.+..|.+.|
T Consensus 129 ---------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 129 ---------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp ---------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred ---------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 1122345666777666777999998877665555443222 234557776 676665555688999999
Q ss_pred cCCcceEEEEeec------------CCceEEEEEccCCCEEEEecC
Q psy17188 468 LHNQTLVRQFQGH------------TDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 468 ~~~~~~~~~~~~h------------~~~v~~~~~s~d~~~l~s~s~ 501 (504)
.++++.+..+... .+..+.|+|+|+++.|+..|.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999888742 134689999999888887764
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.07 E-value=1.9e-07 Score=84.57 Aligned_cols=244 Identities=11% Similarity=0.058 Sum_probs=147.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-C------------------CCCCeEEEEEcc-CCCEEEEEc
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-G------------------HTDGASCIDISA-DGTKLWTGG 264 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~------------------h~~~v~~~~~~~-~~~~l~s~~ 264 (504)
...+++|.+++++++++..++.|..||..+++...... . ....+.++++.+ ++ .|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEE
Confidence 34578899999878888889999999987764432110 0 113578899997 55 455555
Q ss_pred CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeC-----------------CCcE
Q psy17188 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGE-----------------ASNL 326 (504)
Q Consensus 265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i 326 (504)
..+.|..+|..+++++.+... ...........+++.+ +|+..++-.. ++.|
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~-----------~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATS-----------VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTTEEEEECTTCEECEEEESE-----------ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCCCEEEEeCCCCEEEEeccc-----------CCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 455688888876654332100 0001123467899999 9986666432 3668
Q ss_pred EEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC
Q psy17188 327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406 (504)
Q Consensus 327 ~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 406 (504)
..||..+++.... .........++++++++. ++++....+.|..|++...... ....+.. ... ...+++.++
T Consensus 168 ~~~d~~~~~~~~~---~~~~~~p~gia~~~dg~~-lyv~d~~~~~I~~~~~~~~~~~-~~~~~~~--~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 168 IKYDPSTKETTLL---LKELHVPGGAEVSADSSF-VLVAEFLSHQIVKYWLEGPKKG-TAEVLVK--IPN-PGNIKRNAD 239 (322)
T ss_dssp EEEETTTTEEEEE---EEEESCCCEEEECTTSSE-EEEEEGGGTEEEEEESSSTTTT-CEEEEEE--CSS-EEEEEECTT
T ss_pred EEEeCCCCEEEEe---ccCCccCcceEECCCCCE-EEEEeCCCCeEEEEECCCCcCC-ccceEEe--CCC-CCCeEECCC
Confidence 8888765532211 111224567999999875 4455556789999998753211 1111111 122 678999999
Q ss_pred CCEEEEeeC----------CCcEEEeeCCCCCcceeecccCC--CCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 407 GRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSS--APACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 407 g~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
|++.++... .+.|..+|.. ++.......... ...++.+++ .+++++++...++.|.++++..
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 986666544 4568888864 443333333221 234556666 3566666666678888888753
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=1.6e-07 Score=82.58 Aligned_cols=231 Identities=10% Similarity=0.034 Sum_probs=138.9
Q ss_pred CcEEEEecCCeEEEEeCCCCCCCCc--eeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeec
Q psy17188 125 TKYVYTGGKGCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTS 201 (504)
Q Consensus 125 ~~~l~~~~d~~i~vw~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~ 201 (504)
|.+|..+..+.|+.++++....... ...+. .....+..++|+++++.|+.+ ..++.|..+++..... ......
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~--~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~ 76 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLH--IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQ 76 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEE--EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECT
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeec--CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEEC
Confidence 3456665656889999876432210 11111 112457899999976666655 4567899999876542 222222
Q ss_pred CcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCCC
Q psy17188 202 SAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLREG 277 (504)
Q Consensus 202 ~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~ 277 (504)
.......+++.+++..|+.+ ...+.|.+++++.................++++|++..|+.+.. .+.|..++++..
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 22457899999976555544 45678999998754322222222356789999997666555543 368888887654
Q ss_pred ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISP 356 (504)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~ 356 (504)
..... ..........+++++++..|+++. ..+.|.++|........ .... ......++..
T Consensus 157 ~~~~~---------------~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~--~~~~-~~~P~gi~~d- 217 (267)
T 1npe_A 157 NRRIL---------------AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK--VLEG-LQYPFAVTSY- 217 (267)
T ss_dssp CCEEE---------------ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE--EEEC-CCSEEEEEEE-
T ss_pred CcEEE---------------EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE--EecC-CCCceEEEEe-
Confidence 32211 011224578999999877766554 55789999987542211 1121 2234556543
Q ss_pred CCCCceeeeccCCCeEEEEecCCC
Q psy17188 357 DSKSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 357 ~~~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
+.. ++++....+.|..+|..++
T Consensus 218 -~~~-lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 218 -GKN-LYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp -TTE-EEEEETTTTEEEEEETTTT
T ss_pred -CCE-EEEEECCCCeEEEEeCCCC
Confidence 333 6666667788999998754
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.07 E-value=1.5e-08 Score=101.34 Aligned_cols=277 Identities=16% Similarity=0.117 Sum_probs=154.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEECCCCeEEE--eec-CCCCCeEEEEEccCCCEEEEEcC-CCeEEE
Q psy17188 208 ALAISP-DSKVCFSCCSDG-----------NIAVWDLHNQTLVR--QFQ-GHTDGASCIDISADGTKLWTGGL-DNTVRS 271 (504)
Q Consensus 208 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~ 271 (504)
..++.+ ++++++.|+.+. .+.+||..+++... .+. .+.....++++..++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 888888887543 58899998875322 221 13334445778889999999984 458999
Q ss_pred EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CC-----CcEEEEeCCCCCccceeee--c
Q psy17188 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EA-----SNLSIWDLASPTPRIKAEL--T 343 (504)
Q Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~v~d~~~~~~~~~~~~--~ 343 (504)
||+.+++.... . .......-.+++..++++.++.|+ .+ ..+.+||..+.+....... .
T Consensus 270 yd~~t~~W~~~---~-----------~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 270 YDSSSDSWIPG---P-----------DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp EEGGGTEEEEC---C-----------CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred ecCcCCceeEC---C-----------CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence 99988764321 1 111112224556677899999988 34 4699999987654332100 0
Q ss_pred cCCCceeeEEECCCCCCceeeeccC---------CCeEEEEecCCCCCCCccccccc----ccCCCceEEEEEc-CCCCE
Q psy17188 344 SSAPACYALAISPDSKSPFFSSHHY---------KSCVKVWDISQPGSKTPVSQLDC----LQRDNYIRSVKLL-PDGRT 409 (504)
Q Consensus 344 ~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~~~~~~~~~~~~~----~~~~~~i~~~~~s-~~g~~ 409 (504)
.....-....+..++. +++.++. ...+..||.....-......... ......-.++.+. .++++
T Consensus 336 p~~~~~~~~~~~~~~~--iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i 413 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNH--AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI 413 (656)
T ss_dssp GGCCCCTTGGGTTTCS--CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE
T ss_pred ccccccccceeecCCc--eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE
Confidence 0000000011122232 3333333 34567888765432111111100 0001112344443 37788
Q ss_pred EEEeeCCC-----------cEEEeeCCCCCcceee--cccCCCCceeEEEECCCCCEEEEeeCC-----------CcEEE
Q psy17188 410 LIVGGEAS-----------NLSIWDLASPTPRIKA--ELTSSAPACYALAISPDSKVCFSCCSD-----------GNIAV 465 (504)
Q Consensus 410 l~~~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~~v~~l~~s~~~~~l~s~~~d-----------g~i~i 465 (504)
+++|+.++ .|.+||..+....... .+.. ...-.+++..|++++++.|+.+ ..+.+
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ 492 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEI 492 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS-CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEE
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC-CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEE
Confidence 88887543 5788888765543332 2221 1112344677899999999864 46899
Q ss_pred EEcCCcceEE--EEeecCCceEEEEEccCCCEEEEecC
Q psy17188 466 WDLHNQTLVR--QFQGHTDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 466 wd~~~~~~~~--~~~~h~~~v~~~~~s~d~~~l~s~s~ 501 (504)
||..+.+-.. .+...........+.+|++.++.||.
T Consensus 493 ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 493 YVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 9987765322 11111222334556799999999985
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.07 E-value=9.1e-08 Score=86.76 Aligned_cols=242 Identities=9% Similarity=0.009 Sum_probs=142.8
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee-----------------cCcCceEEEEECC-CCCEEEEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------------SSAPACYALAISP-DSKVCFSC 221 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~v~~~~~s~-~~~~l~~~ 221 (504)
....+++|.++++++.++..++.|..|+..+++........ ........+++.+ +++ |+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34567889999987888888899999988754422111000 0113478899997 554 5555
Q ss_pred eCCCcEEEEECCCCeEEEee---cC-CCCCeEEEEEcc-CCCEEEEEcC-----------------CCeEEEEECCCCce
Q psy17188 222 CSDGNIAVWDLHNQTLVRQF---QG-HTDGASCIDISA-DGTKLWTGGL-----------------DNTVRSWDLREGCV 279 (504)
Q Consensus 222 ~~dg~i~iwd~~~~~~~~~~---~~-h~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~~wd~~~~~~ 279 (504)
...+.|..+|..+++..... .+ .......+++.+ +|++.++-.. ++.|..+|..++++
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 55556888887765422111 11 123468899999 8976666432 36788888877764
Q ss_pred EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
..+. ........++++++++.|+++ ...+.|.+|++..........+..... ...+++.+++
T Consensus 178 ~~~~----------------~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 178 TLLL----------------KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp EEEE----------------EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS
T ss_pred EEec----------------cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC
Confidence 3211 111335679999999977666 556889999987532111111111222 7788999998
Q ss_pred CCceeeeccC----------CCeEEEEecCCCCCCCccccccccc--CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188 359 KSPFFSSHHY----------KSCVKVWDISQPGSKTPVSQLDCLQ--RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 359 ~~~~~~~~~~----------~~~i~i~d~~~~~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~ 426 (504)
. ++++... .+.|..+|... . .+..+.... ....+..+++ .+++++++...++.|..+++..
T Consensus 241 ~--l~va~~~~~~~~~~~~~~~~v~~~d~~G-~---~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 241 H--FWVSSSEELDGNMHGRVDPKGIKFDEFG-N---ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp C--EEEEEEEETTSSTTSCEEEEEEEECTTS-C---EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred C--EEEEecCcccccccCCCccEEEEECCCC-C---EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 6 4444433 45677776531 1 111111111 0233556666 4566555555677888888763
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.04 E-value=8.4e-08 Score=82.55 Aligned_cols=217 Identities=10% Similarity=0.078 Sum_probs=135.5
Q ss_pred ccceeeecCCCc--EEEEEEcCCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-
Q psy17188 104 ARQINTLSHGEV--VCAVTISNPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG- 177 (504)
Q Consensus 104 ~~~~~~~~h~~~--V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~- 177 (504)
.+.+.++.|... ...++|++++++.++.+ ++.|.++|+.+++... .+.. +.......+++. ++.|..+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~---~i~l-~~~~fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVEN---IHKM-DDSYFGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEE---EEEC-CTTCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEE---EEec-CCCcceEEEEEe--CCEEEEEE
Confidence 455667777754 57999999887777654 5899999999864333 2222 112222345554 4455544
Q ss_pred cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEE
Q psy17188 178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCID 252 (504)
Q Consensus 178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~ 252 (504)
-.++.+.++|..+.+........ ... ...+++|++.|+++..++.|.++|.++.+.+..+.-.. ..+..+.
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred ecCCEEEEEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 46789999999876543332222 111 13345578777777778899999999988888776321 2367788
Q ss_pred EccCCCEEEEEcCCCeEEEEECCCCceEEE-eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEe
Q psy17188 253 ISADGTKLWTGGLDNTVRSWDLREGCVKVW-DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWD 330 (504)
Q Consensus 253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d 330 (504)
|. ++...+....++.|.+.|+.++++.-+ +...... . ..............++|+|+++.+++ +...+.+.+.+
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~--~-~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRK--K-LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHH--H-HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccc--c-cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 88 675556666688999999999986321 1100000 0 00000011245689999999876555 45667788887
Q ss_pred CCCC
Q psy17188 331 LASP 334 (504)
Q Consensus 331 ~~~~ 334 (504)
+...
T Consensus 235 l~~~ 238 (266)
T 2iwa_A 235 LHLV 238 (266)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 7543
No 257
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.04 E-value=1.3e-07 Score=81.40 Aligned_cols=200 Identities=9% Similarity=0.031 Sum_probs=133.5
Q ss_pred ceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeE
Q psy17188 161 YIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTL 237 (504)
Q Consensus 161 ~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~ 237 (504)
....+.|++++.+.++.+. ++.|.++|+.+++......+..+. ....+++. ++.|+ +.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 4679999998754454443 578999999988754443333322 22345554 44444 444678999999999999
Q ss_pred EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc---cCCceEEEEEcCCC
Q psy17188 238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ---RDNYIRSVKLLPDG 314 (504)
Q Consensus 238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~ 314 (504)
+.++...... ...+++|++.++.+..++.|.++|..+.+... .+.... .-..+..+.|. ++
T Consensus 99 ~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~-------------~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIK-------------KHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEE-------------EEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEE-------------EEEECCCCcccccceeEEEE-CC
Confidence 9988633111 23456678877777778999999998876421 111111 11235677777 67
Q ss_pred CEEEEEeCCCcEEEEeCCCCCccceeeecc-----------CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188 315 RTLIVGGEASNLSIWDLASPTPRIKAELTS-----------SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
+..+....++.|.+.|..+++......+.+ .......++++|+++. +++++...+.+...++...
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~-lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR-IFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE-EEEEETTCSEEEEEEEEEC
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCE-EEEECCCCCeEEEEEEecc
Confidence 544444467899999999986554444431 1135689999999886 7888888888888887654
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.00 E-value=3.8e-08 Score=98.22 Aligned_cols=274 Identities=12% Similarity=0.141 Sum_probs=156.4
Q ss_pred CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeC------CCcEEEEECCCCeEEEeec
Q psy17188 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCS------DGNIAVWDLHNQTLVRQFQ 242 (504)
Q Consensus 171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~ 242 (504)
+..+++++.|+.|..+|..+++............ ...+..+| .+..++++.. ++.|..+|.++|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK-PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS-SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC-cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 5678888889999999999988655444321110 00011111 1234555543 5889999999999988775
Q ss_pred CCC---C----------------------------CeEEEEEccCCCEEEEEcCCC-------------------eEEEE
Q psy17188 243 GHT---D----------------------------GASCIDISADGTKLWTGGLDN-------------------TVRSW 272 (504)
Q Consensus 243 ~h~---~----------------------------~v~~~~~~~~~~~l~s~~~dg-------------------~i~~w 272 (504)
... . ....+++.++..+++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 0 112467888888888888776 39999
Q ss_pred ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeecc-----
Q psy17188 273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTS----- 344 (504)
Q Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----- 344 (504)
|.++|+. +|.......... ......+.....+..+|+ .+++++.+|.++++|..+++......+..
T Consensus 276 D~~tG~~-~W~~~~~~~~~w-----d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 349 (668)
T 1kv9_A 276 RPDTGKL-AWHYQVTPGDSW-----DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE 349 (668)
T ss_dssp CTTTCCE-EEEEESSTTCCS-----CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred cCCCCce-eeEeecCCCccc-----cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc
Confidence 9999985 454432211000 000112222222333564 68888999999999999886542211110
Q ss_pred ----C-CCc------------------------eeeEEECCCCCCceee-------------------------------
Q psy17188 345 ----S-APA------------------------CYALAISPDSKSPFFS------------------------------- 364 (504)
Q Consensus 345 ----~-~~~------------------------i~~~~~~~~~~~~~~~------------------------------- 364 (504)
. ..+ -..++++|+....++-
T Consensus 350 ~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 429 (668)
T 1kv9_A 350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT 429 (668)
T ss_dssp EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred ccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccC
Confidence 0 000 0124555554431110
Q ss_pred ---eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCc
Q psy17188 365 ---SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA 441 (504)
Q Consensus 365 ---~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 441 (504)
....++.|..||..+++..-.... ........+...+.++++++.|+.++.||.++++.+..........
T Consensus 430 ~~p~~~~~g~l~A~D~~tG~~~W~~~~------~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~- 502 (668)
T 1kv9_A 430 DVPAAVVSGALLAWDPVKQKAAWKVPY------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIV- 502 (668)
T ss_dssp CCCGGGCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-
T ss_pred CCCCCCccceEEEEeCCCCcEEEEccC------CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcc-
Confidence 122347899999877643222111 1122233444567789999999999999999998877666543211
Q ss_pred eeEEEECCCCC-EEEEee
Q psy17188 442 CYALAISPDSK-VCFSCC 458 (504)
Q Consensus 442 v~~l~~s~~~~-~l~s~~ 458 (504)
..-+.+..+|+ +++.++
T Consensus 503 ~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 503 AAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred cCceEEEECCEEEEEEEe
Confidence 12234445666 555444
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.00 E-value=1.6e-07 Score=93.93 Aligned_cols=281 Identities=13% Similarity=0.135 Sum_probs=155.4
Q ss_pred EEEEcc-CCCEEEEecCCC-----------cEEEEeCCCCCccceeeeec-CcCceEEEEECCCCCEEEEEeC-CCcEEE
Q psy17188 164 SVKLLP-DGRTLIVGGEAS-----------NLSIWDLASPTPRIKAELTS-SAPACYALAISPDSKVCFSCCS-DGNIAV 229 (504)
Q Consensus 164 ~~~~s~-~~~~l~~~~~dg-----------~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-dg~i~i 229 (504)
++++.+ +++.++.|+.+. .+.+||..+++......+.. +.....++++..++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 667777 888888887543 58899999887655444432 2233445778889999999884 458999
Q ss_pred EECCCCeEEEeecCCCC-CeEEEEEccCCCEEEEEc-CC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188 230 WDLHNQTLVRQFQGHTD-GASCIDISADGTKLWTGG-LD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302 (504)
Q Consensus 230 wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (504)
||..+.+-...-..+.. .-.+++..+++++++.|+ .+ ..+.+||+.+++..... .....+ .....+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~---~~~~~p---~~~~~~~ 343 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLP---NAKVNP---MLTADKQ 343 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEET---TSCSGG---GCCCCTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCC---Cccccc---ccccccc
Confidence 99988765433222222 123455667899999988 44 57999999987744321 000000 0000000
Q ss_pred CceEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCCccceeeeccC-------CCceeeEEECC-CCCCceeee
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSS-------APACYALAISP-DSKSPFFSS 365 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~-------~~~i~~~~~~~-~~~~~~~~~ 365 (504)
..+..++..++.++.+ ..+..||..+............ ...-..+.+.. +++ +++.
T Consensus 344 -----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~--i~v~ 416 (656)
T 1k3i_A 344 -----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK--ILTF 416 (656)
T ss_dssp -----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE--EEEE
T ss_pred -----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCe--EEEE
Confidence 0112234444444333 4577888877643221111110 01122333323 333 6666
Q ss_pred ccCCC-----------eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----------CcEEEee
Q psy17188 366 HHYKS-----------CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----------SNLSIWD 423 (504)
Q Consensus 366 ~~~~~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----------g~i~iwd 423 (504)
|+.++ .+.+||.....-.... .........-.+++..|+++++++|+.+ ..+.+||
T Consensus 417 GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 417 GGSPDYQDSDATTNAHIITLGEPGTSPNTVFA--SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp CCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC--TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc--cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence 65432 5667776543211000 0011112222366778899999999854 4589999
Q ss_pred CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188 424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 459 (504)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~ 459 (504)
..+.+..................+.+|++.++.|+.
T Consensus 495 p~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 495 PEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp GGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 876543332222222222234466799999999885
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=3.2e-07 Score=77.90 Aligned_cols=202 Identities=10% Similarity=0.073 Sum_probs=126.9
Q ss_pred cceeeecCCCc--EEEEEEcCCCcEEEEec-CC--eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-c
Q psy17188 105 RQINTLSHGEV--VCAVTISNPTKYVYTGG-KG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-G 178 (504)
Q Consensus 105 ~~~~~~~h~~~--V~~v~~s~~~~~l~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~ 178 (504)
+.+.++.|+.. ...+.|+ ++.+..+.+ +| .|+++|+++++....+ .. ..........++++.|... -
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~---~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI---EL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE---EC---CTTCCEEEEEEETTEEEEEES
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE---ec---CCccceeEEEEeCCEEEEEEe
Confidence 44556666544 4788898 666666666 55 8999999987443322 22 2233333333345555554 3
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEE
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDI 253 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~ 253 (504)
.++.+.+||.++.+........++. ..++ +|++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.|
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDGEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSSCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred eCCEEEEEECccCcEEEEEECCCCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence 5889999999987754444333321 2333 467777777667889999999998888765421 33456777
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188 254 SADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 323 (504)
Q Consensus 254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 323 (504)
. +|+..+..-.+..|.+.|.+++++.- ++...-.... . .........+.++++|+++.|++.+..
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~---~-~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEA---G-PLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGS---C-SCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccc---c-cccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6 67666666678899999999998643 2221100000 0 011223457899999998888777653
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.91 E-value=2.2e-07 Score=90.64 Aligned_cols=278 Identities=11% Similarity=0.057 Sum_probs=153.9
Q ss_pred EEEccCCCE----EEEecCCCcEEEEeCCCCCccceeeeecCcC--ceEE-EEECCCCCEEEEEe------CCCcEEEEE
Q psy17188 165 VKLLPDGRT----LIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACYA-LAISPDSKVCFSCC------SDGNIAVWD 231 (504)
Q Consensus 165 ~~~s~~~~~----l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~~-~~~s~~~~~l~~~~------~dg~i~iwd 231 (504)
++++|.+.. |++++.|+.|..+|..+++......+..+.. .+.+ .... ++ .+++++ .++.|+.+|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEE
Confidence 455444444 8888889999999999888655544433210 1111 1111 44 455554 378999999
Q ss_pred CCCCeEEEeecCCCCC-------------------------------------e-EEEEEccCCCEEEEEcCC-------
Q psy17188 232 LHNQTLVRQFQGHTDG-------------------------------------A-SCIDISADGTKLWTGGLD------- 266 (504)
Q Consensus 232 ~~~~~~~~~~~~h~~~-------------------------------------v-~~~~~~~~~~~l~s~~~d------- 266 (504)
.++|+.+.++...... + ..+++.++..+++.+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET 268 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence 9999998876532211 0 134566667777777655
Q ss_pred ---------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCC---CEEEEEeCCCcEEEEeCCC
Q psy17188 267 ---------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDG---RTLIVGGEASNLSIWDLAS 333 (504)
Q Consensus 267 ---------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~v~d~~~ 333 (504)
+.|..+|.++|+.+ |..+....... .......++ -+... .+| ..++.++.+|.++++|.++
T Consensus 269 ~r~gd~~y~~sv~Ald~~TG~~~-W~~q~~~~d~w----d~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADTGEAK-FGYQKTPHDEW----DYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp GSCSCCTTSSEEEEEETTTCCEE-EEEESSTTCSS----CCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCccccceEEEEeCCCCcee-eEeecCCCccc----cccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 38999999999863 54433211100 000001111 12222 466 4677788999999999988
Q ss_pred CCccceeeecc-----------CCCce--------------------------eeEEECCCCCCceeee-----------
Q psy17188 334 PTPRIKAELTS-----------SAPAC--------------------------YALAISPDSKSPFFSS----------- 365 (504)
Q Consensus 334 ~~~~~~~~~~~-----------~~~~i--------------------------~~~~~~~~~~~~~~~~----------- 365 (504)
++......+.. ...++ ..++++|+.+..++.+
T Consensus 343 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 422 (599)
T 1w6s_A 343 GALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFM 422 (599)
T ss_dssp CCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECC
T ss_pred CCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccc
Confidence 86544333211 00000 1344555444211100
Q ss_pred --------------------cc------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 366 --------------------HH------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 366 --------------------~~------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
.+ ..+.+..||+.+++..-.... ..+...-.+...+.+++.++.|+.+
T Consensus 423 ~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~------~~~~~~g~~~tagg~vf~gt~dg~l 496 (599)
T 1w6s_A 423 LPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME------RFAVWGGTMATAGDLVFYGTLDGYL 496 (599)
T ss_dssp CCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE------SSCCCSBCEEETTTEEEEECTTSEE
T ss_pred ccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC------CCCccCcceEecCCEEEEECCCCeE
Confidence 01 346777888776543221111 0111111122356678889999999
Q ss_pred EEeeCCCCCcceeecccCCCCceeEEEECCCCCE-EEEe
Q psy17188 420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSC 457 (504)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~-l~s~ 457 (504)
+.||.++++.+....+..... ..-+.+..+|+. +++.
T Consensus 497 ~A~D~~tG~~lW~~~l~~g~~-~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 497 KARDSDTGDLLWKFKIPSGAI-GYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEEEEEE
T ss_pred EEEECCCCCEEEEeeCCCCcE-eccEEEEeCCEEEEEEE
Confidence 999999999887776543221 122455567764 4443
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=7.6e-08 Score=81.62 Aligned_cols=184 Identities=10% Similarity=0.118 Sum_probs=124.4
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS 382 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 382 (504)
.....+.|+ ++.+..+.+.+|.|+++|+++++..... +.. ......+.++++. ++...-.++.+.+||..+.+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---~~FgeGit~~g~~-Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG---NIFAEGLASDGER-LYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT---TCCEEEEEECSSC-EEEEESSSCEEEEEETTTTEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC---CcceeEEEEeCCE-EEEEEccCCEEEEEECCcCcE
Confidence 345788887 3566667778889999999998765555 333 3333333344554 555666799999999886543
Q ss_pred CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCC---ceeEEEECCCCCEEEEeeC
Q psy17188 383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCS 459 (504)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~~~~~l~s~~~ 459 (504)
...+.. ... ...+++|++.|+.+..++.|.++|..+.+............ .++.+.|. +|+..+..-.
T Consensus 129 ~~ti~~---~~e-----GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 129 ERTTRY---SGE-----GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp EEEEEC---SSC-----CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEEeC---CCc-----eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence 333221 111 12333578888888778899999999887666555543332 34667777 7766655556
Q ss_pred CCcEEEEEcCCcceEEEEeec-------------CCceEEEEEccCCCEEEEecC
Q psy17188 460 DGNIAVWDLHNQTLVRQFQGH-------------TDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 460 dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~s~d~~~l~s~s~ 501 (504)
+..|.+.|.++++.+..+... .+..+.|+|+|+++.|+..|.
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 789999999999999888732 135689999998777666553
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.90 E-value=5.4e-07 Score=88.03 Aligned_cols=271 Identities=11% Similarity=0.094 Sum_probs=152.6
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--ceEE-EEECCCCCEEEEEeC------CCcEEEEECCCCeEEEe
Q psy17188 170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACYA-LAISPDSKVCFSCCS------DGNIAVWDLHNQTLVRQ 240 (504)
Q Consensus 170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~ 240 (504)
++..+++++.|+.|..+|..+++......+..+.. .+.+ .... ++ .+++++. ++.|..+|.++++.+.+
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 35678888889999999999888665544433211 1111 1111 44 5555554 78999999999999887
Q ss_pred ecCCCCC--------------------------------------eEEEEEccCCCEEEEEcCC----------------
Q psy17188 241 FQGHTDG--------------------------------------ASCIDISADGTKLWTGGLD---------------- 266 (504)
Q Consensus 241 ~~~h~~~--------------------------------------v~~~~~~~~~~~l~s~~~d---------------- 266 (504)
+...... ...+++.++...++.+..+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 6532110 0135566766667666532
Q ss_pred CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188 267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELT 343 (504)
Q Consensus 267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 343 (504)
+.|..+|.++|+. +|..+....... .......++ -+....+|+ .++.++.+|.++++|.++++......+.
T Consensus 272 ~~v~Ald~~tG~~-~W~~~~~~~d~~----d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 272 MTIWGRDLDTGMA-KWGYQKTPHDEW----DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp TEEEEEETTTCCE-EEEEESSTTCSS----CCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEEecCCCcE-EEEecCCCCccc----ccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 3699999999985 465443211000 000011111 122224674 5677888999999999888654433322
Q ss_pred cC-----------CCce--------------------------eeEEECCCCCCceeeec--------------------
Q psy17188 344 SS-----------APAC--------------------------YALAISPDSKSPFFSSH-------------------- 366 (504)
Q Consensus 344 ~~-----------~~~i--------------------------~~~~~~~~~~~~~~~~~-------------------- 366 (504)
.. ..++ ..++++|+...+++.+.
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 10 0011 23456666553222211
Q ss_pred ---------------cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188 367 ---------------HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 367 ---------------~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~ 431 (504)
..++.+..||..+++..-.... ...+....+...+..+++++.||.|+.||.++++.+.
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~------~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE------KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE------SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecC------CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 1357888888876543222111 1111122223345678889999999999999998877
Q ss_pred eecccCCCCceeEEEECCCCCEEE
Q psy17188 432 KAELTSSAPACYALAISPDSKVCF 455 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~ 455 (504)
......... ..-+.+..+++.++
T Consensus 500 ~~~~~~~~~-~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 500 NFKMPSGGI-GSPMTYSFKGKQYI 522 (571)
T ss_dssp EEECSSCCC-SCCEEEEETTEEEE
T ss_pred EEeCCCCcE-eeeEEEEECCEEEE
Confidence 766543221 12234556776544
No 264
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.87 E-value=9.4e-05 Score=72.80 Aligned_cols=369 Identities=9% Similarity=0.013 Sum_probs=193.3
Q ss_pred CcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCc-EEEEec--CCeEEEEeCCCCCCC
Q psy17188 72 KPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTK-YVYTGG--KGCVKVWDISQPGSK 147 (504)
Q Consensus 72 ~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~~~~--d~~i~vw~~~~~~~~ 147 (504)
..+..+++.+.+ ++.......+.+.................-.....|++.|.+. +..+-- .+.|...+++... .
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-R 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-C
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-e
Confidence 455666666533 3444343444444433333222211113344567889988644 444432 4567767765421 1
Q ss_pred CceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188 148 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 226 (504)
Q Consensus 148 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 226 (504)
..+. . ..-...+.++++++++.|..+ ...+.|...+++........ .+.......+++..+ .+.++-..++.
T Consensus 163 ~~l~--~--~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~--~~~~~~P~gi~~~~~-~ly~td~~~~~ 235 (619)
T 3s94_A 163 FIII--N--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFED-ILYWTDWSTHS 235 (619)
T ss_dssp EEEE--C--SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCS
T ss_pred EEEE--e--CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE--eCCCCCceEEEEeCC-EEEEecCCCCE
Confidence 1111 1 234567899999977766665 45677999988754332221 111122346677655 34444446778
Q ss_pred EEEEECCCCeEEEeecCCCCCeEE-------------------------EEE-----------ccCCC------------
Q psy17188 227 IAVWDLHNQTLVRQFQGHTDGASC-------------------------IDI-----------SADGT------------ 258 (504)
Q Consensus 227 i~iwd~~~~~~~~~~~~h~~~v~~-------------------------~~~-----------~~~~~------------ 258 (504)
|...|..+++....+......... +++ .|.|-
T Consensus 236 V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 315 (619)
T 3s94_A 236 ILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 315 (619)
T ss_dssp EEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSS
T ss_pred EEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCC
Confidence 999998777544333211111111 111 11110
Q ss_pred ---EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCC
Q psy17188 259 ---KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASP 334 (504)
Q Consensus 259 ---~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~ 334 (504)
+|+.+ ..+.|+..++.... ... .......-..+..++|++.+..|+.+ ...+.|+.++....
T Consensus 316 ~~~~Ll~~-~~~~i~~i~l~~~~----------~~~---~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~ 381 (619)
T 3s94_A 316 ATELLLLA-RRTDLRRISLDTPD----------FTD---IVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS 381 (619)
T ss_dssp CSEEEEEE-ESSCEEEEESSSTT----------CCC---EECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEE-cccceEEEecCCCc----------cce---eEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC
Confidence 11111 11222323332221 000 00011122347789999866666555 45678988888764
Q ss_pred CccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188 335 TPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414 (504)
Q Consensus 335 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 414 (504)
... ............+++.+.++. ++.+-...+.|.+.++..... ..+. ...-.....+++.|...+|+...
T Consensus 382 ~~~--~v~~~~~~~p~GlAvD~~~~~-lY~tD~~~~~I~v~~~~G~~~-~~l~----~~~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 382 GSQ--FVVTAQIAHPDGIAVDWVARN-LYWTDTGTDRIEVTRLNGTMR-KILI----SEDLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp SCE--EEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSCSC-EEEE----CTTCCSEEEEEEETTTTEEEEEE
T ss_pred ccE--EEEECCCCCcCceEEecccCc-EEEEeCCCCcEEEEeCCCCeE-EEEE----ECCCCCeeeEEEEcCCCcEEEec
Confidence 322 222223346778898876554 666777788999998875321 1111 12334577999999755565554
Q ss_pred C--CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcc
Q psy17188 415 E--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQT 472 (504)
Q Consensus 415 ~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~ 472 (504)
. ...|...+++....... ........+.|+++++++.|..+.. .+.|..+++....
T Consensus 454 ~g~~~~I~r~~~dG~~~~~l--~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 454 WGEIPKIERAALDGSDRVVL--VNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred CCCCCEEEEEccCCCccEEE--EeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence 3 35677777654332222 2223455788999997777776654 5678888886443
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=1.8e-06 Score=73.26 Aligned_cols=204 Identities=11% Similarity=0.079 Sum_probs=126.1
Q ss_pred cccceeeecCCCc--EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188 103 HARQINTLSHGEV--VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 179 (504)
Q Consensus 103 ~~~~~~~~~h~~~--V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 179 (504)
..+.+.++.|+.. ...+.|+. +.+..+.+ +|.|+++|+++++....+ + ...-.-..+++.. ++..+..-.
T Consensus 42 ~~~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l---~~~~FgeGit~~g-~~Ly~ltw~ 114 (268)
T 3nok_A 42 VAHIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--R---LGNIFAEGLASDG-ERLYQLTWT 114 (268)
T ss_dssp EEEEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--E---CTTCCEEEEEECS-SCEEEEESS
T ss_pred ceEEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--C---CCCcceeEEEEeC-CEEEEEEcc
Confidence 3455566666544 46888884 55555555 889999999997655444 2 2222223355542 233334446
Q ss_pred CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEEc
Q psy17188 180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDIS 254 (504)
Q Consensus 180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~ 254 (504)
++.+.+||.++.+.........+ -..++ +|++.|+.+..++.|.++|.++.+.+.++.-.. ..++.+.|.
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred CCEEEEEECCcCcEEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 88999999997765433333322 13344 467788877778899999999998888775422 245677777
Q ss_pred cCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188 255 ADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 322 (504)
Q Consensus 255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 322 (504)
+|+..+....+..|.+.|.+++++.- +++..-.... ...........+.|+++|+++.|++.+.
T Consensus 190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~---~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAV---AGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHH---TTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccc---cccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 67666666678899999999998642 2221000000 0001122346789999997766665544
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.81 E-value=1.8e-06 Score=87.63 Aligned_cols=155 Identities=8% Similarity=-0.041 Sum_probs=96.9
Q ss_pred cEEEEEEc-CCCcEEEEec--C----CeEEEEeCCCC-CCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC-----C
Q psy17188 115 VVCAVTIS-NPTKYVYTGG--K----GCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----S 181 (504)
Q Consensus 115 ~V~~v~~s-~~~~~l~~~~--d----~~i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g 181 (504)
.+...+|| |||++||.+. + ..|+++|++++ +.... .+ ......++|+||++.|+....+ .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~-----~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV-----SGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE-----EEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc-----cCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 68889999 9999988654 2 25999999886 42111 11 1123468999999988887654 3
Q ss_pred cEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCC--eE--EEeecCCCCCeEEEEE
Q psy17188 182 NLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQ--TL--VRQFQGHTDGASCIDI 253 (504)
Q Consensus 182 ~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~--~~--~~~~~~h~~~v~~~~~ 253 (504)
.|+++++.+++......+. ........+.|+||+++|+..+. ...|.++|+.++ +. .............+.|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 5888888765432222222 22234567899999998887653 346888999875 23 3333334455566665
Q ss_pred ccCCCEEEEEcCC----CeEEEEECCC
Q psy17188 254 SADGTKLWTGGLD----NTVRSWDLRE 276 (504)
Q Consensus 254 ~~~~~~l~s~~~d----g~i~~wd~~~ 276 (504)
+.++.+++....+ ..|..+++.+
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 5444344444433 2566666654
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.78 E-value=1.9e-05 Score=71.02 Aligned_cols=236 Identities=9% Similarity=0.047 Sum_probs=141.9
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCC----ceEEEeecCCCCCC
Q psy17188 217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREG----CVKVWDISQPGSKT 291 (504)
Q Consensus 217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~----~~~~~~~~~~~~~~ 291 (504)
+|+.+. ...|+..|+.+.+....+. ....+..++|++++..| ++-..++.|..+++... ...
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~----------- 69 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD----------- 69 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE-----------
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE-----------
Confidence 344443 3579999998876655554 44567899999865544 45556688999988762 111
Q ss_pred CcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC-C
Q psy17188 292 PVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-K 369 (504)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~ 369 (504)
.+ .......+..+++++.+..|+ +-...+.|.+++........ ...........+++.|.+.. ++++... .
T Consensus 70 ---~~-~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~P~~iavdp~~g~-ly~~d~~~~ 142 (316)
T 1ijq_A 70 ---TV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT--LFRENGSKPRAIVVDPVHGF-MYWTDWGTP 142 (316)
T ss_dssp ---EE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE--EEECTTCCEEEEEEETTTTE-EEEEECSSS
T ss_pred ---EE-EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE--EEECCCCCcceEEeCCCCCE-EEEEccCCC
Confidence 00 111123457889987555554 44567889999987543221 22223346789999987775 3344333 3
Q ss_pred CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188 370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAIS 448 (504)
Q Consensus 370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 448 (504)
+.|..+++..... ..+. ...-.....+++++++..|+.+. ..+.|..+|+....................+++.
T Consensus 143 ~~I~~~~~dG~~~-~~~~----~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 143 AKIKKGGLNGVDI-YSLV----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp CEEEEEETTSCCE-EEEE----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred CeEEEEcCCCCCe-EEEE----ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence 7788887753211 1110 11234567999999877776665 4568999998754333332222223345667775
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188 449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 478 (504)
.+.++++-...+.|..++..+++.+..+.
T Consensus 218 -~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 218 -EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp -TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 34555555567889999987777666654
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.78 E-value=1.1e-05 Score=78.92 Aligned_cols=272 Identities=12% Similarity=0.091 Sum_probs=151.0
Q ss_pred CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--ceE-E-EEEC--CCCC-EEEEEeC------CCcEEEEECCCCeE
Q psy17188 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACY-A-LAIS--PDSK-VCFSCCS------DGNIAVWDLHNQTL 237 (504)
Q Consensus 171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~-~-~~~s--~~~~-~l~~~~~------dg~i~iwd~~~~~~ 237 (504)
+..+++++.|+.|..+|.++++.........+.. .+. . +... .+++ .+++++. ++.|..+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 5677888889999999999988655544433210 011 0 1111 1233 5666543 78999999999998
Q ss_pred EEeecCCCCCe-----------------------------------------EEEEEccCCCEEEEEcC-----------
Q psy17188 238 VRQFQGHTDGA-----------------------------------------SCIDISADGTKLWTGGL----------- 265 (504)
Q Consensus 238 ~~~~~~h~~~v-----------------------------------------~~~~~~~~~~~l~s~~~----------- 265 (504)
+.........+ ..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87654211000 12456666667776552
Q ss_pred ---------C----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCC---EEEEEeCCCcEEE
Q psy17188 266 ---------D----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGR---TLIVGGEASNLSI 328 (504)
Q Consensus 266 ---------d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~l~~~~~dg~i~v 328 (504)
| +.|..+|.++|+.+ |..+...... ........++ -+... .+|+ .++.++.+|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~-W~~q~~~~d~----wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~ 350 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVK-WFYQHTPNDA----WDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYV 350 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEE-EEEESSTTCC----SCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEE
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEE-EEEeCCCCCc----ccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEE
Confidence 2 58999999999854 5543321100 0000001111 12222 4664 6788899999999
Q ss_pred EeCCCCCccceeeeccCC-----------Cc--------------------------------eeeEEECCCCCCceeee
Q psy17188 329 WDLASPTPRIKAELTSSA-----------PA--------------------------------CYALAISPDSKSPFFSS 365 (504)
Q Consensus 329 ~d~~~~~~~~~~~~~~~~-----------~~--------------------------------i~~~~~~~~~~~~~~~~ 365 (504)
+|.++++........... .+ -..++++|+....++..
T Consensus 351 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 351 VDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA 430 (582)
T ss_dssp EETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE
T ss_pred EECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec
Confidence 999888654333322100 00 01345555544322211
Q ss_pred c-------------------------------cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188 366 H-------------------------------HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414 (504)
Q Consensus 366 ~-------------------------------~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 414 (504)
. ...+.|..||+.+++..-.... ...+..-.....+.++++++
T Consensus 431 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~------~~~~~~g~~~tagglvf~g~ 504 (582)
T 1flg_A 431 NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE------HLPLWAGVLATAGNLVFTGT 504 (582)
T ss_dssp ECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE------SSCCCSCCEEETTTEEEEEC
T ss_pred hhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecC------CCCCcccceEeCCCEEEEEC
Confidence 0 1357788888877643222211 01111111222466788899
Q ss_pred CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE
Q psy17188 415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF 455 (504)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~ 455 (504)
.|+.++.||.++++.+.......... ..-+.+..+|+..+
T Consensus 505 ~dg~l~A~D~~tG~~lW~~~~~~g~~-a~P~~y~~~G~qYv 544 (582)
T 1flg_A 505 GDGYFKAFDAKSGKELWKFQTGSGIV-SPPITWEQDGEQYL 544 (582)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEEE
T ss_pred CCCcEEEEECCCCCEEEEecCCCCcc-cCceEEEECCEEEE
Confidence 99999999999999888776654321 12246666776433
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.75 E-value=3.8e-05 Score=71.43 Aligned_cols=252 Identities=9% Similarity=0.019 Sum_probs=148.8
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188 217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ 295 (504)
Q Consensus 217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 295 (504)
+|+.+. ...|+..++........+. ....+..++|++.+..|+ +-...+.|+.+++...... ... .
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~----------~~~-~ 151 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----------SSY-D 151 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------------CCC-E
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC----------Ccc-e
Confidence 444443 4678888988765544444 456788999998655554 4455678888887652100 000 1
Q ss_pred ceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188 296 LDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV 374 (504)
Q Consensus 296 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i 374 (504)
............+++.+.+..| ++-...+.|.+.++..... .............+++.|.+..++++-.+..+.|..
T Consensus 152 ~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 152 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred EEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEE
Confidence 1111123457889999854444 4555677899999876532 222233344678999999776534433334577888
Q ss_pred EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188 375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV 453 (504)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~ 453 (504)
.++......... ...-.....+++++++..|+.+. ..+.|..+|+....................+++. .+.+
T Consensus 230 ~~~dG~~~~~~~-----~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~l 303 (400)
T 3p5b_L 230 GGLNGVDIYSLV-----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKV 303 (400)
T ss_dssp EETTSCSCEEEE-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEE
T ss_pred EeCCCCccEEEE-----ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEE
Confidence 887643221111 11234567999999887777765 4567999998765443333322223344566763 3344
Q ss_pred EEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188 454 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 489 (504)
Q Consensus 454 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 489 (504)
+++-...+.|..++..+|+.+..+........++..
T Consensus 304 ywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 304 FWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 555566788999998888777766644444555543
No 270
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.75 E-value=6.8e-07 Score=75.23 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=122.1
Q ss_pred CCceEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 302 DNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 302 ~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
......+.|++ +.++.+.+.+ ..|+.+|+.+++......+.. ......+...++. ++...-.++.+.+||..+
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---~~fgeGi~~~~~~-ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---PYFGAGIVAWRDR-LIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---TCCEEEEEEETTE-EEEEESSSSEEEEEETTT
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---CcceeEEEEeCCE-EEEEEeeCCEEEEEECCc
Confidence 45567899986 4555555554 389999999986555444443 2222333333444 556667789999999876
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEE
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFS 456 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s 456 (504)
......+. ... . ...+.++++.|+++..++.|.++|..+.+.........+. ..++.+.+. +|+..+.
T Consensus 95 l~~~~ti~---~~~---~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyan 165 (243)
T 3mbr_X 95 LTPRARFR---YPG---E--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLAN 165 (243)
T ss_dssp TEEEEEEE---CSS---C--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred CcEEEEEe---CCC---C--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEE
Confidence 54333222 111 1 2233456777777777889999999988766655554332 234566665 6665555
Q ss_pred eeCCCcEEEEEcCCcceEEEEeec-------------CCceEEEEEccCCCEEEEecC
Q psy17188 457 CCSDGNIAVWDLHNQTLVRQFQGH-------------TDGASCIDISADGTKLWTGGL 501 (504)
Q Consensus 457 ~~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~s~d~~~l~s~s~ 501 (504)
.-.+..|.+.|.++++.+..+... .+..+.|+++|+++.|+..|.
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 556778999999999999888722 135689999998887777654
No 271
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.75 E-value=0.00023 Score=70.13 Aligned_cols=413 Identities=9% Similarity=0.024 Sum_probs=217.8
Q ss_pred CCcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeee-c-CCCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCC
Q psy17188 71 GKPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTL-S-HGEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPG 145 (504)
Q Consensus 71 ~~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~ 145 (504)
-+.+..+++.+.+ .+.-.....+.+........ .+..+ . -......+++.+.+. +.++-. .+.|.+.+++...
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS--ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC--CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 3567778887644 44444455555554433322 11222 2 123567788886544 444444 7899999987532
Q ss_pred CCCceeeeeecCCCCceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188 146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC- 222 (504)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 222 (504)
...+. . ..-.....+++.|...+|+.... .+.|...+++...... +.........|++++++..|+.+.
T Consensus 114 -~~~l~---~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 114 -RQVLV---W-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT---LVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp -CEEEE---C-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSCSSEEEEEEETTTTEEEEEET
T ss_pred -EEEEE---e-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE---EECCCCCcceEEEccccCEEEEEEC
Confidence 11111 1 23355789999996666666542 5678888877544322 222345578999999777666664
Q ss_pred CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE-EE-------------eecCC-
Q psy17188 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK-VW-------------DISQP- 287 (504)
Q Consensus 223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~-~~-------------~~~~~- 287 (504)
..+.|...|++.... ..+........++++.. +..+++-...+.|...|..+++.. +. .....
T Consensus 186 ~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~ 263 (628)
T 4a0p_A 186 DTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS 263 (628)
T ss_dssp TTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSC
T ss_pred CCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccc
Confidence 457899999875433 23333444566888765 445556556788999987665421 11 11000
Q ss_pred CCCCCc-----ccceecccC-CceEEEE-----EcCCC-------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188 288 GSKTPV-----SQLDCLQRD-NYIRSVK-----LLPDG-------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 349 (504)
Q Consensus 288 ~~~~~~-----~~~~~~~~~-~~v~~~~-----~~~~~-------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i 349 (504)
...... ....+.... ....|.+ ..+++ .+|+.+. ...|+-..+..............-..+
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~~l~~~~~~~~ 342 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ-KSAINRMVIDEQQSPDIILPIHSLRNV 342 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE-TTEEEEECCCTTCCCCEECCCTTCSCE
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeec-cceEEEEecccccCceEEEEehhcCCc
Confidence 000000 000000001 1111111 11222 2344433 344555554432111111111122457
Q ss_pred eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-cccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCCCC
Q psy17188 350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASP 427 (504)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~~~ 427 (504)
..+++.+..+. ++.+-...+.|+.++.........+.. .........+..+++...++.|+ +-+..+.|.+.+++.
T Consensus 343 ~~ld~d~~~~~-iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G- 420 (628)
T 4a0p_A 343 RAIDYDPLDKQ-LYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG- 420 (628)
T ss_dssp EEEEEETTTTE-EEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS-
T ss_pred eEEEEecCCCe-EEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC-
Confidence 78888887665 555666677888887654321111110 00001233577999998876655 445677899999864
Q ss_pred CcceeecccCCCCceeEEEECCCCCEEE-EeeCCC--cEEEEEcCCcceEEEE-eecCCceEEEEEccCCCEEEEec
Q psy17188 428 TPRIKAELTSSAPACYALAISPDSKVCF-SCCSDG--NIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 428 ~~~~~~~~~~~~~~v~~l~~s~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
+..... ..........+++.|...+|. +-.... .|...+++ |.....+ ...-...+.|+++++++.|+.+.
T Consensus 421 ~~~~~l-~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d-G~~~~~l~~~~l~~P~gla~D~~~~~LYw~D 495 (628)
T 4a0p_A 421 RSVGVV-LKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSKPIALALDSRLGKLFWAD 495 (628)
T ss_dssp CEEEEE-EECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CeEEEE-EeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC-CCCcEEEEeccCCCccEEEEeCCCCEEEEEe
Confidence 322222 222344578899999544444 433222 56666665 3333333 22234578899998877776554
No 272
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=4.1e-06 Score=70.49 Aligned_cols=202 Identities=15% Similarity=0.135 Sum_probs=124.6
Q ss_pred cceeeecCCC--cEEEEEEcCCCcEEEEec-C--CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEE-ec
Q psy17188 105 RQINTLSHGE--VVCAVTISNPTKYVYTGG-K--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GG 178 (504)
Q Consensus 105 ~~~~~~~h~~--~V~~v~~s~~~~~l~~~~-d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~ 178 (504)
+.+.+..|+. -...+.|++ +.+..+.+ + ..|+.+|+++++....+ .. ...........+++.|.. .-
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~---~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA---EV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE---EC---CTTCCEEEEEEETTEEEEEES
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE---eC---CCCcceeEEEEeCCEEEEEEe
Confidence 4555666754 366899987 55555555 3 58999999987433322 22 122222223333444444 45
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEE
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDI 253 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~ 253 (504)
.++.+.+||.++.+........++ =..++ ++++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.|
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPGE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSSC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred eCCEEEEEECCcCcEEEEEeCCCC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 688999999987665433333332 13444 467777777778899999999998888776422 34566776
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188 254 SADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 322 (504)
Q Consensus 254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 322 (504)
. +|+..+..-.+..|.+.|.+++++.- +++..-..... . .........+.++++|+++.|++.+.
T Consensus 158 ~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~--~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 158 V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDAD--A-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTT--S-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccc--c-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5 67666666578899999999998643 33221100000 0 00123346789999998877777654
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.72 E-value=1.5e-05 Score=74.98 Aligned_cols=246 Identities=10% Similarity=0.054 Sum_probs=139.6
Q ss_pred eEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---Ce-EEEEECCCCce
Q psy17188 206 CYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NT-VRSWDLREGCV 279 (504)
Q Consensus 206 v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~-i~~wd~~~~~~ 279 (504)
...++|.|+ ...|+.+...+.|+.+|+.+++...... .......++++++++++++-... .. +...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 467999984 4455555554899999998887665443 55668999999999944443321 11 22222211110
Q ss_pred EEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
.............++++| ++++.++-..++.|+.+|..++.................++++|++
T Consensus 220 ---------------~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 220 ---------------ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp ---------------CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS
T ss_pred ---------------ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC
Confidence 000111234467789999 6766656566788999998755431111111122233469999999
Q ss_pred CCceeeeccCCCeEEEEecCCCCCCC-cccccc-------------cccCCCceEEEEE---------cCCCCEEEEeeC
Q psy17188 359 KSPFFSSHHYKSCVKVWDISQPGSKT-PVSQLD-------------CLQRDNYIRSVKL---------LPDGRTLIVGGE 415 (504)
Q Consensus 359 ~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~-------------~~~~~~~i~~~~~---------s~~g~~l~~~~~ 415 (504)
+. ++++-...+.|+.++........ ....+. ....-.....+++ .++|.++++-..
T Consensus 285 ~~-LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 285 DW-AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp SE-EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CE-EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 75 56666678899998875321110 000000 0011234567999 777776666666
Q ss_pred CCcEEEeeCCCCCcceeeccc---------------CCCCceeEEEEC-CCCCEEEEeeCCCcEEEEEcC
Q psy17188 416 ASNLSIWDLASPTPRIKAELT---------------SSAPACYALAIS-PDSKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~~---------------~~~~~v~~l~~s-~~~~~l~s~~~dg~i~iwd~~ 469 (504)
.+.|+.++.. +......... ........++++ +++.++++=..+++|+.++++
T Consensus 364 n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 364 SHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7789998853 3221111100 011235677888 555555555556777777654
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=6.8e-05 Score=68.34 Aligned_cols=253 Identities=10% Similarity=0.056 Sum_probs=149.8
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecC
Q psy17188 208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQ 286 (504)
Q Consensus 208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~ 286 (504)
|.+..++. +|+.+ ....|+..++........+. ....+..++|++.+..|+ +-...+.|..+++..+....+
T Consensus 38 C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---- 110 (349)
T 3v64_C 38 CKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---- 110 (349)
T ss_dssp EEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----
T ss_pred ccccccCc-eeEee-cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE----
Confidence 44444433 44443 34568888887665544444 344578999997555554 445678899999887653211
Q ss_pred CCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188 287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS 365 (504)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 365 (504)
..........+++++.+..| ++-...+.|.+.++..... .............+++.|.+.. ++.+
T Consensus 111 -----------~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~-ly~t 176 (349)
T 3v64_C 111 -----------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGT-IYWT 176 (349)
T ss_dssp -----------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTE-EEEE
T ss_pred -----------EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCe-EEEe
Confidence 11112345788999855555 4445567899999875432 2222233346789999997765 4444
Q ss_pred ccCC-CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188 366 HHYK-SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACY 443 (504)
Q Consensus 366 ~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 443 (504)
.... +.|..+++......... ...-.....++++|++..|+.+. ..+.|..+|+.......... .......
T Consensus 177 d~~~~~~I~r~~~dG~~~~~~~-----~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~--~~~~~P~ 249 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRIIA-----DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPF 249 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEESC-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEE-----ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe--CCCCCce
Confidence 4444 78888887643211111 11234467999998777776664 45679999987543322221 2233456
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188 444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 489 (504)
Q Consensus 444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 489 (504)
.+++. ++..+++-...+.|..++..+|+.+..+.........+++
T Consensus 250 giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 250 AITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEEEE-CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 67773 4445555556788888887777766666533333444443
No 275
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.72 E-value=0.00014 Score=65.59 Aligned_cols=282 Identities=9% Similarity=0.014 Sum_probs=144.2
Q ss_pred CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188 113 GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 192 (504)
Q Consensus 113 ~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 192 (504)
...+.+|.|.+++..++++.++.| +...+.++.-..+. .........+.++.|.+ ++.++ ++.++.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~-~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRT-LVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECC-CCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECC-CCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 346899999988888887777765 33333332212111 11112245688999986 44444 445564443 222222
Q ss_pred -ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188 193 -PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270 (504)
Q Consensus 193 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 270 (504)
.........+...+..+.+.+++..++++ .++.|.. ..+.++. ..........+..+.+.+++.+++.+...+..+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 11111111123446778877676655554 4565432 2222322 222234566789999999888777665444333
Q ss_pred EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec--cCCCc
Q psy17188 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--SSAPA 348 (504)
Q Consensus 271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~ 348 (504)
-+|-...... .. .......+..+.+.++++.+++ +.+|.+++.+...++.-...... .....
T Consensus 188 S~d~gG~tW~--------------~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~ 251 (327)
T 2xbg_A 188 TWEPGQTAWE--------------PH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVG 251 (327)
T ss_dssp EECTTCSSCE--------------EE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred EeCCCCCcee--------------EC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence 3442111111 11 1123456788889998876544 46787777642211100001111 11235
Q ss_pred eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188 349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 424 (504)
Q Consensus 349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~ 424 (504)
+..+.+.+++. +++.+. ++.+ .+..+.+..-..... .......+..+.|.++++ +++++.+|.|.-++-
T Consensus 252 ~~~v~~~~~~~--~~~~g~-~g~i-~~S~DgG~tW~~~~~--~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 252 FLDLAYRTPNE--VWLAGG-AGAL-LCSQDGGQTWQQDVD--VKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEEESSSSC--EEEEES-TTCE-EEESSTTSSCEECGG--GTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred eEEEEecCCCE--EEEEeC-CCeE-EEeCCCCcccEEcCc--cCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 77888887665 555544 5655 233333322111111 011234567888876555 555667887776653
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.71 E-value=7.3e-05 Score=67.16 Aligned_cols=229 Identities=9% Similarity=0.029 Sum_probs=137.9
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCC---CccceeeeecC
Q psy17188 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASP---TPRIKAELTSS 202 (504)
Q Consensus 127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~---~~~~~~~~~~~ 202 (504)
+|+.+....|+..|+++..... .+ ........++|.++++.|+.+ ..++.|..+++... .. ....+...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~---~~---~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~ 75 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTS---LI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRD 75 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEE---EE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSS
T ss_pred EEEEECCCeEEEEECCCcceEe---hh---cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCC
Confidence 4555666779999987643211 11 234567899999876656555 45688999998751 11 11222222
Q ss_pred cCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCce
Q psy17188 203 APACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCV 279 (504)
Q Consensus 203 ~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~ 279 (504)
......+++.+.+..| ++-..++.|.+.+++.......+.........+++.|.+..|+.+... +.|...+++....
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 2345788888654444 454567889999987654333333344567899999866655554432 6788888765432
Q ss_pred EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
+.+ ....-.....+++++++..|+.+. ..+.|..+|+....................+++.. +
T Consensus 156 ~~~---------------~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~ 219 (316)
T 1ijq_A 156 YSL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D 219 (316)
T ss_dssp EEE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T
T ss_pred EEE---------------EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C
Confidence 211 011234578999999877776654 55689999987543322222222233456777742 2
Q ss_pred CCceeeeccCCCeEEEEecCCC
Q psy17188 359 KSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 359 ~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
. ++++....+.|..++..++
T Consensus 220 -~-ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 220 -K-VFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp -E-EEEEETTTTEEEEEETTTC
T ss_pred -E-EEEEECCCCeEEEEeCCCC
Confidence 2 6667677788888886543
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.69 E-value=3.3e-06 Score=85.74 Aligned_cols=249 Identities=12% Similarity=0.072 Sum_probs=130.2
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----cEEEEECCCC-eEEEe-ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEE
Q psy17188 205 ACYALAIS-PDSKVCFSCCS-DG----NIAVWDLHNQ-TLVRQ-FQGHTDGASCIDISADGTKLWTGGLD-----NTVRS 271 (504)
Q Consensus 205 ~v~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~ 271 (504)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.+.. +. .....+.|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 47789999 99998875543 33 4999999998 63211 11 123468899999888877665 25777
Q ss_pred EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCccc--eeeeccCC
Q psy17188 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRI--KAELTSSA 346 (504)
Q Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~--~~~~~~~~ 346 (504)
+++.+++.. .. .+...........+.|+|||++|+.... ...|.++|+.++.... ........
T Consensus 252 ~~lgt~~~~-----------~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~ 319 (751)
T 2xe4_A 252 HVMGKLQSE-----------DV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK 319 (751)
T ss_dssp EETTSCGGG-----------CE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT
T ss_pred EECCCCchh-----------cE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC
Confidence 887765310 00 0100112234567899999999887653 3458888987753222 22222223
Q ss_pred CceeeEEECCCCCCceeeeccC---CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc--EEE
Q psy17188 347 PACYALAISPDSKSPFFSSHHY---KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN--LSI 421 (504)
Q Consensus 347 ~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~i 421 (504)
.....+.|.. ++.+++.+... ...|..+++......... +........+..+.+. .+.++++...++. |++
T Consensus 320 ~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 320 GVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred CceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 3334444332 55434444322 235666666532111110 1111112234556665 3345556666775 556
Q ss_pred eeC-------CCCCcceeecccCCCCceeEEEE----CCCCC-EEEEeeCC---CcEEEEEcCCcce
Q psy17188 422 WDL-------ASPTPRIKAELTSSAPACYALAI----SPDSK-VCFSCCSD---GNIAVWDLHNQTL 473 (504)
Q Consensus 422 wd~-------~~~~~~~~~~~~~~~~~v~~l~~----s~~~~-~l~s~~~d---g~i~iwd~~~~~~ 473 (504)
+++ .+++......+.... .+..+.+ +++++ ++++.+.. ..++.+|+.+++.
T Consensus 396 ~dl~~~~~~~~~g~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 396 MMADSQDGVFKAGTGLREVVMEEPI-FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp EECCTTTSCCCTTTCCEECCCCCSS-CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred EecccccccccCCccceEECCCCce-eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 665 333202222232221 1223322 34555 44444332 4677888877653
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=1.2e-05 Score=75.66 Aligned_cols=245 Identities=8% Similarity=0.014 Sum_probs=139.4
Q ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC-C----eEEEEECCCCce
Q psy17188 206 CYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD-N----TVRSWDLREGCV 279 (504)
Q Consensus 206 v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g----~i~~wd~~~~~~ 279 (504)
...++++| ++..|+++...+.|+.+|+..++...... .......++|++++++|+.+... + .+...+.. +..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 46789998 45566666665889999998876554444 55668899999999966655542 2 23333332 221
Q ss_pred EEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
. .............++++| ++.++++-..++.|..++............. .......++++|++
T Consensus 217 ~--------------~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG 281 (430)
T 3tc9_A 217 K--------------VITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSG 281 (430)
T ss_dssp C--------------SEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTS
T ss_pred e--------------eeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCC
Confidence 0 000111234467889999 6776666667789999998765321222221 22356789999999
Q ss_pred CCceeeeccCCCeEEEEecCCCCC-CCccccccc-------------ccCCCceE-EEEEc--------CCCCEEEEeeC
Q psy17188 359 KSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDC-------------LQRDNYIR-SVKLL--------PDGRTLIVGGE 415 (504)
Q Consensus 359 ~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~-------------~~~~~~i~-~~~~s--------~~g~~l~~~~~ 415 (504)
+. ++++....+.|..++...... ......+.. ...-.... .++.. ++|.+.++=..
T Consensus 282 ~~-lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 282 NY-AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp SE-EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred CE-EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 85 556666788899988753210 000000000 00011122 44543 34555555555
Q ss_pred CCcEEEeeCCCCCcceeecc-----cC----------CCCceeEEEECCC-CCEEEEeeCCCcEEEEEcC
Q psy17188 416 ASNLSIWDLASPTPRIKAEL-----TS----------SAPACYALAISPD-SKVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~-----~~----------~~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~ 469 (504)
.+.|+.++. ++........ .+ .......++++|+ +.++++-..+..|+.++++
T Consensus 361 n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 361 NHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 677888884 3322221111 00 1124678899985 5555554556778877654
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=4.9e-06 Score=78.25 Aligned_cols=245 Identities=10% Similarity=0.072 Sum_probs=136.7
Q ss_pred CceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CC----cEEEEECC
Q psy17188 160 NYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DG----NIAVWDLH 233 (504)
Q Consensus 160 ~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg----~i~iwd~~ 233 (504)
.....++++| ++..|.++...+.|+.+|++.... ..+.........++|+++++.|+++.. ++ .+...+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 3467889998 456666665558899999876542 222234455789999999996666654 22 2333443
Q ss_pred CCeEE--EeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 234 NQTLV--RQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 234 ~~~~~--~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
.+... ..+. .......++++| ++.++++-..++.|..++..++....+ ...........++|
T Consensus 213 ~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~--------------~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 213 ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL--------------FTIQDSGWEFHIQF 277 (430)
T ss_dssp GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE--------------EECSSSSCCEEEEE
T ss_pred CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE--------------EEcCCCCcceeEEE
Confidence 23211 2222 123456788999 677666766788999999987764211 11112234678999
Q ss_pred cCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeeccC---------------CCcee-eEEECC------CCCCceeee
Q psy17188 311 LPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTSS---------------APACY-ALAISP------DSKSPFFSS 365 (504)
Q Consensus 311 ~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~~---------------~~~i~-~~~~~~------~~~~~~~~~ 365 (504)
+|+|++|+++ ...+.|..++........ ...+... -.... .++..+ |....++++
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva 357 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC 357 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE
Confidence 9999965555 456788888765321110 1111100 01122 444432 122226666
Q ss_pred ccCCCeEEEEecCCCCCCCccccc-------------ccccCCCceEEEEEcCC-CCEEEEeeCCCcEEEeeCC
Q psy17188 366 HHYKSCVKVWDISQPGSKTPVSQL-------------DCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 366 ~~~~~~i~i~d~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~ 425 (504)
-...+.|+.++.. + ....+... .....-.....++++|+ +.++++-..+..|+.++++
T Consensus 358 D~~n~~I~~i~~~-G-~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 358 DRENHCIRILTPQ-G-RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EGGGTEEEEECTT-S-EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCCcEEEEECCC-C-cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 6677788888732 1 11000000 00011235678999995 5555554456678777653
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.66 E-value=4.1e-05 Score=65.47 Aligned_cols=208 Identities=10% Similarity=0.105 Sum_probs=128.2
Q ss_pred cCCCcEEEEEEcCCCcEEEE-ec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188 111 SHGEVVCAVTISNPTKYVYT-GG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 188 (504)
Q Consensus 111 ~h~~~V~~v~~s~~~~~l~~-~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 188 (504)
+-.+.+..++++|++..|.+ .. ++.|...|.+ +. .+..+.. ........+++.+++.++++.-.++.+.++++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~---v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD---LIRTIPL-DFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC---EEEEEEC-SSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC---EEEEEec-CCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 44457999999997665544 44 7788888876 32 2233322 22356788999999887777656788999988
Q ss_pred CCCCc-cceeee------ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC---CCeEEEee-------cCCCCCeEEE
Q psy17188 189 ASPTP-RIKAEL------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH---NQTLVRQF-------QGHTDGASCI 251 (504)
Q Consensus 189 ~~~~~-~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-------~~h~~~v~~~ 251 (504)
..... ...... .........++|+|+++.|+++.+.....+|.++ ....+..+ ..+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 75442 111111 1223446899999998877777776665666554 11111111 1234567899
Q ss_pred EEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17188 252 DISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 330 (504)
Q Consensus 252 ~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 330 (504)
+++|. +++++.....+.|..+|........+.+.... ......-.....|++.++|+ |++.++.+.+++|.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~-------~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGS-------RGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTG-------GGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCcc-------CCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 99995 45666677778899999876544444332210 00011123568899999998 44446767676665
Q ss_pred C
Q psy17188 331 L 331 (504)
Q Consensus 331 ~ 331 (504)
-
T Consensus 251 ~ 251 (255)
T 3qqz_A 251 P 251 (255)
T ss_dssp C
T ss_pred e
Confidence 3
No 281
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.62 E-value=4e-05 Score=70.97 Aligned_cols=253 Identities=11% Similarity=0.068 Sum_probs=150.4
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEEEeecC
Q psy17188 208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKVWDISQ 286 (504)
Q Consensus 208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~ 286 (504)
|.+..++ .+|+.+ ....|+.+++........+. ....+..++|.+.+..| ++-...+.|+.+++..+....+
T Consensus 81 C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---- 153 (386)
T 3v65_B 81 CKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---- 153 (386)
T ss_dssp EEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE----
T ss_pred ECCcccc-ceeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE----
Confidence 3333443 344444 34578888887765544444 34557899999755544 4555678899999887653221
Q ss_pred CCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188 287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS 365 (504)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 365 (504)
..........+++++.+..|+ +-...+.|.+.++..... .............+++.|.+.. ++.+
T Consensus 154 -----------~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l~~P~giavdp~~g~-ly~t 219 (386)
T 3v65_B 154 -----------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGT-IYWT 219 (386)
T ss_dssp -----------ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSCSCEEEEEEETTTTE-EEEE
T ss_pred -----------EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCCCCCcEEEEEcCCCe-EEEe
Confidence 111122356788888655554 445567888888765432 2222333346789999988775 3444
Q ss_pred ccCC-CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188 366 HHYK-SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACY 443 (504)
Q Consensus 366 ~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 443 (504)
.... +.|..+++......... ...-.....++++|++..|+.+. ..+.|..+|+.......... .......
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~-----~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~ 292 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIA-----DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPF 292 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEE-----CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC--SSCSSEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEE-----ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE--CCCCCce
Confidence 4444 78888887643211111 11233467999998777766654 45679999987543322221 2233456
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188 444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 489 (504)
Q Consensus 444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 489 (504)
.+++ ..+.++++-...+.|..++..+|+.+..+.........|++
T Consensus 293 giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 293 AITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 7787 34455555566788999997778777666543334444544
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.62 E-value=1.4e-05 Score=75.14 Aligned_cols=243 Identities=11% Similarity=0.043 Sum_probs=136.5
Q ss_pred CceEEEEEccC--CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEEC
Q psy17188 160 NYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDL 232 (504)
Q Consensus 160 ~~v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~ 232 (504)
.....++|+|+ ...|..+...+.|+.++..+++. ..+.........++|+++++ |+.+...+ .+...+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v---~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV---DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE---EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE---EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 34668999984 45566655448899999876543 22333445578999999999 44444322 1333332
Q ss_pred CCCeE-EEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCce-EEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 233 HNQTL-VRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 233 ~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
..+.. ...+. .......++++| ++.++++-..++.|+.+|..++.+ ... ...........++
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~--------------~~~~~~~~~~~ia 279 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE--------------VMMDTKGSNFHIV 279 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE--------------EECSCCSSCEEEE
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE--------------eccCCCCCcccEE
Confidence 21110 01111 223456788999 676666666778999999987765 211 0011112234699
Q ss_pred EcCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeecc---------------CCCceeeEEE---------CCCCCCce
Q psy17188 310 LLPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTS---------------SAPACYALAI---------SPDSKSPF 362 (504)
Q Consensus 310 ~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~---------------~~~~i~~~~~---------~~~~~~~~ 362 (504)
++|++++|+++ ...+.|..++........ ...+.+ .-.....+++ .+++. +
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~--l 357 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD--F 357 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE--E
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc--E
Confidence 99999966555 456789998765321111 111111 1123556888 55554 7
Q ss_pred eeeccCCCeEEEEecCCCCCCCcccc-------------cccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCC
Q psy17188 363 FSSHHYKSCVKVWDISQPGSKTPVSQ-------------LDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 363 ~~~~~~~~~i~i~d~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~ 425 (504)
+++-...+.|+.++... ....+.. ......-.....++++ ++|.++++=..++.|+.++++
T Consensus 358 yvaD~~n~~I~~~~~~G--~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTPEG--RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEETTTTEEEEECTTS--EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEECCCCEEEEECCCC--CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 77777788898887421 1000000 0000112346789999 566655555556678877654
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.61 E-value=0.00017 Score=65.63 Aligned_cols=241 Identities=11% Similarity=0.041 Sum_probs=143.2
Q ss_pred EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEee
Q psy17188 163 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQF 241 (504)
Q Consensus 163 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~ 241 (504)
+|.+..++ .+|+.+. ...|+..++..... .... ........++|.+....|+.. ...+.|..+++........+
T Consensus 37 ~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~--~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 37 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEY--TLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp CEEESSSC-CEEEEEC-BSCEEEECTTSCCE--EEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cccccccC-ceeEeec-ccceEEEeCCCCee--EEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 34444443 3444443 45688888765432 2222 233447899999766655554 45678999998876544434
Q ss_pred cCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188 242 QGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320 (504)
Q Consensus 242 ~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 320 (504)
.........+++.+.+ +++++-...+.|.+.+++...... ...........++++|.+..|+..
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~---------------l~~~~l~~P~~iavdp~~g~ly~t 176 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV---------------LLWQSLEKPRAIALHPMEGTIYWT 176 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---------------EECTTCSCEEEEEEETTTTEEEEE
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE---------------EEeCCCCCcceEEEecCcCeEEEe
Confidence 3333456788998754 445565667889999887653221 111223457899999976666655
Q ss_pred eC-C-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 321 GE-A-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 321 ~~-d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
.. . +.|..+++....... .....-.....++++++++. ++++-...+.|..+|+...... .+.. ......
T Consensus 177 d~~~~~~I~r~~~dG~~~~~--~~~~~~~~PnGla~d~~~~~-lY~aD~~~~~I~~~~~dG~~~~-~~~~----~~~~~P 248 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRI--IADTHLFWPNGLTIDYAGRR-MYWVDAKHHVIERANLDGSHRK-AVIS----QGLPHP 248 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEE--SCCSSCSCEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSCE-EEEC----SSCSSE
T ss_pred ccCCCCEEEEEeCCCCCcEE--EEECCCCCcceEEEeCCCCE-EEEEECCCCEEEEEeCCCCceE-EEEe----CCCCCc
Confidence 43 3 678888876542221 11223345789999987776 5566667789999998643211 1111 113345
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
..+++. .+..+++-...+.|..++..+++....
T Consensus 249 ~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 249 FAITVF-EDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred eEEEEE-CCEEEEecCCCCeEEEEEccCCCccEE
Confidence 677773 444555555667788888655554433
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.61 E-value=0.00012 Score=68.02 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=141.0
Q ss_pred cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCC--ccceeeeecC
Q psy17188 126 KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPT--PRIKAELTSS 202 (504)
Q Consensus 126 ~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~--~~~~~~~~~~ 202 (504)
.+|+.+....|+..+++..... .+ ......+..++|.+....|..+ ...+.|+.+++.... ..........
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~----~~--~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYT----SL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCE----EE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEeccceeEEEccCCccee----Ee--ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 3566666688999998764221 11 1345678899999866666655 456788888886522 1112223323
Q ss_pred cCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCce
Q psy17188 203 APACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL--DNTVRSWDLREGCV 279 (504)
Q Consensus 203 ~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~ 279 (504)
......+++.+. +++.++-...+.|.+.+++.......+.........|++.|.+..|+.... .+.|...+++....
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 445778999874 445555556788999998766544444444556889999996656555442 36788888875442
Q ss_pred EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS 358 (504)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 358 (504)
..+ ....-.....+++++++..|+.+. ..+.|..+|+....................+++..
T Consensus 238 ~~~---------------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-- 300 (400)
T 3p5b_L 238 YSL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-- 300 (400)
T ss_dssp EEE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET--
T ss_pred EEE---------------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC--
Confidence 211 111224578999998877777664 45689999987643333322222233455666632
Q ss_pred CCceeeeccCCCeEEEEecCCC
Q psy17188 359 KSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 359 ~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
.. ++.+....+.|..+|..++
T Consensus 301 ~~-lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 301 DK-VFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TE-EEEEESSSCSEEEEESSSC
T ss_pred CE-EEEecCCCCeEEEEEcCCC
Confidence 22 5666667777888875544
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.58 E-value=0.00025 Score=63.97 Aligned_cols=276 Identities=9% Similarity=0.016 Sum_probs=143.6
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-----cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-----SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPG 145 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~ 145 (504)
...+..+.+.+++...++. ..+.++... ...+.-... .....+.+|.|.+ ++.++++.++.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~~s~--DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLMETR--DGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEEEES--STTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEEEeC--CCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCC
Confidence 3467777776666555533 233333221 111111111 1245789999986 56666666775543 333332
Q ss_pred CCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC
Q psy17188 146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 225 (504)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 225 (504)
.-..+... ..+.+.+..+.+.++++.++++. ++.|. ...++..............+..+.+.+++.+++.+. +|
T Consensus 110 tW~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~-~g~v~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 110 SWSQIPLD--PKLPGSPRLIKALGNGSAEMITN-VGAIY--RTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp SCEECCCC--TTCSSCEEEEEEEETTEEEEEET-TCCEE--EESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred CceECccc--cCCCCCeEEEEEECCCCEEEEeC-CccEE--EEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence 22211110 01234577888887777666664 55443 222212222223334455788999999888776664 45
Q ss_pred cEEE-EEC--CCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188 226 NIAV-WDL--HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302 (504)
Q Consensus 226 ~i~i-wd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (504)
.+.. +|- .+.+.+. ......+..+.+.+++..+ .++.+|.+++.+.+.++ .|.... .......
T Consensus 184 ~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~--tW~~~~---------~~~~~~~ 249 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE--NWGELL---------SPLRRNS 249 (327)
T ss_dssp SEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE--EECCCB---------CTTSSCC
T ss_pred cEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC--eeEecc---------CCcccCC
Confidence 5444 342 2333332 2345678899999988655 45567887776533232 222110 0000112
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d 376 (504)
..+.++.+.++++.++++. ++.+. +....++ .............+..+.+.+++. ++..+.+|.|..++
T Consensus 250 ~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~---~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 250 VGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ---GFILGQKGILLRYV 319 (327)
T ss_dssp SCEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE---EEEECSTTEEEEEC
T ss_pred cceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc---eEEEcCCceEEEEc
Confidence 3478889998887666654 66663 3333332 111111111234677788865443 44555677776665
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.54 E-value=9.1e-05 Score=68.57 Aligned_cols=241 Identities=10% Similarity=0.031 Sum_probs=143.7
Q ss_pred EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeec
Q psy17188 164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQ 242 (504)
Q Consensus 164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~ 242 (504)
|.+..+ ..+|+.+. ...|+.+++..... .. +.........++|.+.+..|+.. ...+.|..+++........+.
T Consensus 81 C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~--~~-~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 81 CKALGP-EPVLLFAN-RIDIRQVLPHRSEY--TL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp EEECSS-CCEEEEEC-BSCEEEECTTSCCC--EE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred ECCccc-cceeEeec-CccceeeccCCCcE--EE-EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 344444 33444443 46788888876543 22 22233457899999765555544 456789999988765444444
Q ss_pred CCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188 243 GHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 321 (504)
Q Consensus 243 ~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 321 (504)
........+++.+.+. ++++-...+.|.+.+++...... ...........++++|.+..|+...
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~---------------l~~~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV---------------LLWQSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE---------------EECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE---------------eecCCCCCCcEEEEEcCCCeEEEec
Confidence 3334567788887544 44555566788888876543211 1112234578999999777666654
Q ss_pred C-C-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceE
Q psy17188 322 E-A-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR 399 (504)
Q Consensus 322 ~-d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~ 399 (504)
. . +.|..+++...... ............++++|+++. ++++-...+.|..+|+...... .+.. .......
T Consensus 221 ~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGlavd~~~~~-lY~aD~~~~~I~~~d~dG~~~~-~~~~----~~~~~P~ 292 (386)
T 3v65_B 221 WGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRR-MYWVDAKHHVIERANLDGSHRK-AVIS----QGLPHPF 292 (386)
T ss_dssp CSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEEGGGTE-EEEEETTTTEEEEECTTSCSCE-EEEC----SSCSSEE
T ss_pred cCCCCEEEEEeCCCCCcE--EEEECCCCCeeeEEEeCCCCE-EEEEECCCCEEEEEeCCCCeeE-EEEE----CCCCCce
Confidence 4 3 67888887654222 222223345789999987776 5666667788999997643211 1111 1233456
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188 400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433 (504)
Q Consensus 400 ~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~ 433 (504)
.+++. .+.++++-...+.|..++..+++.....
T Consensus 293 giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 293 AITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 77773 4445555556777888886566544433
No 287
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.53 E-value=0.0017 Score=68.44 Aligned_cols=361 Identities=11% Similarity=0.074 Sum_probs=184.3
Q ss_pred ecCCCcEEEEEEcCC------CcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecC
Q psy17188 110 LSHGEVVCAVTISNP------TKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGE 179 (504)
Q Consensus 110 ~~h~~~V~~v~~s~~------~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~ 179 (504)
..-.+.|.|+++.|. +++++.|. |++|+|+++.+. ..+..... +......++.+.. ...+|..|-.
T Consensus 550 ~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l---~~~~~~~L-~~~~~p~si~l~~~~~~~~L~igl~ 625 (1158)
T 3ei3_A 550 TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF---ELLHKEML-GGEIIPRSILMTTFESSHYLLCALG 625 (1158)
T ss_dssp EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC---CEEEEEEC-CSSCCEEEEEEEEETTEEEEEEEET
T ss_pred cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC---CeEEEEEC-CCCCCCcEEEEEEeCCCcEEEEEeC
Confidence 344668999999863 46888776 899999999752 22222222 2223344444432 3457888989
Q ss_pred CCcEEEEeCCC--CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE-EEEEccC
Q psy17188 180 ASNLSIWDLAS--PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISAD 256 (504)
Q Consensus 180 dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~ 256 (504)
||.+.-+.++. ++........-...++.-..+...+..-+.+..+....++.-+ ++.... .-....+. ...|+..
T Consensus 626 dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se 703 (1158)
T 3ei3_A 626 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSD 703 (1158)
T ss_dssp TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCS
T ss_pred CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcc
Confidence 99987766653 2221111111112344444444344333333345555555433 332221 11112332 3335332
Q ss_pred --CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----------
Q psy17188 257 --GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------- 323 (504)
Q Consensus 257 --~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------- 323 (504)
.+-++..+ ++.+++..+..-+ .| ......-...++.++++|+.+.++++..+
T Consensus 704 ~~~~g~v~~~-~~~LrI~~i~~~~--~~------------~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~ 768 (1158)
T 3ei3_A 704 GYPDSLALAN-NSTLTIGTIDEIQ--KL------------HIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 768 (1158)
T ss_dssp SSTTEEEEEC-SSCEEEEEECCSS--SE------------EEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEE
T ss_pred cCCCcEEEEc-CCceEEEEecccC--Ce------------eEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccc
Confidence 12344333 4558888765421 01 12222234456777777766655443211
Q ss_pred --------------------------------------CcEEEEeCCCCCccceeeeccCCCceeeEE---ECCCCCCce
Q psy17188 324 --------------------------------------SNLSIWDLASPTPRIKAELTSSAPACYALA---ISPDSKSPF 362 (504)
Q Consensus 324 --------------------------------------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~ 362 (504)
+.|++.|-.+.+......+... ..+.+++ +..+.+ .+
T Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n-E~~~sv~~v~~~~~~~-~~ 846 (1158)
T 3ei3_A 769 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN-EYALSLVSCKLGKDPN-TY 846 (1158)
T ss_dssp ESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT-EEEEEEEEECCTTCCC-CE
T ss_pred hhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC-cceEEEEEEEEccCCC-EE
Confidence 1355566554443323333332 2334443 333322 35
Q ss_pred eeecc----------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188 363 FSSHH----------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 432 (504)
Q Consensus 363 ~~~~~----------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~ 432 (504)
++.|. ..|.|.+|++.. ..+........++.+++++-- +|+ |++| ....|++|++...+.+.
T Consensus 847 lvVGTa~~~~~e~~~~~Gri~vf~v~~----~kL~lv~~~~v~g~v~al~~~-~g~-Lla~-ig~~l~vy~l~~~~~L~- 918 (1158)
T 3ei3_A 847 FIVGTAMVYPEEAEPKQGRIVVFQYSD----GKLQTVAEKEVKGAVYSMVEF-NGK-LLAS-INSTVRLYEWTTEKELR- 918 (1158)
T ss_dssp EEEEEEECCTTCSSCCCEEEEEEEEET----TEEEEEEEEEESSCEEEEEEE-TTE-EEEE-ETTEEEEEEECTTSCEE-
T ss_pred EEEEeeecCCCCCCCCceEEEEEEEEC----CEEEEEEEEEcCCcCEEEeee-CCE-EEEE-cCCEEEEEECCCCceEE-
Confidence 65554 357899999872 233333334456778887654 354 4444 34789999998654333
Q ss_pred ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc--CCcceEEEEe-ecCCceEEEEEccCCCEEEEecCCC
Q psy17188 433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDN 503 (504)
Q Consensus 433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~s~s~Dg 503 (504)
...... ..+..+.....+++++.|+.-..|.++.. ..+++...-+ .+...++++.|-.++ .++.+..+|
T Consensus 919 ~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~g 990 (1158)
T 3ei3_A 919 TECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAF 990 (1158)
T ss_dssp EEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTS
T ss_pred EEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCC
Confidence 111111 11222233335789999988777777654 3444332222 244568888887554 455555544
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.53 E-value=0.0002 Score=61.25 Aligned_cols=210 Identities=12% Similarity=0.091 Sum_probs=125.8
Q ss_pred eecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188 240 QFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 318 (504)
Q Consensus 240 ~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 318 (504)
.+.+-...+..++|+|+++.|+ +...++.|...|.. +++.. .+. .........+++.+++.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~-------------~i~-l~g~~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR-------------TIP-LDFVKDLETIEYIGDNQFVI 85 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE-------------EEE-CSSCSSEEEEEECSTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE-------------EEe-cCCCCChHHeEEeCCCEEEE
Confidence 4566667899999999766555 46778899999998 55321 111 12224578899999888767
Q ss_pred EEeCCCcEEEEeCCCCCccc-eeee------ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc--
Q psy17188 319 VGGEASNLSIWDLASPTPRI-KAEL------TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL-- 389 (504)
Q Consensus 319 ~~~~dg~i~v~d~~~~~~~~-~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-- 389 (504)
+.-.++.+.++++....... .... .........+++.|.++.++++.......|..|+ .......+...
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKD 163 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEEC
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecc
Confidence 76667789999876544211 1111 1234456899999998864443333322455554 10000011111
Q ss_pred ---ccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCC-------CCceeEEEECCCCCEEEEee
Q psy17188 390 ---DCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSS-------APACYALAISPDSKVCFSCC 458 (504)
Q Consensus 390 ---~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~s~~~~~l~s~~ 458 (504)
........+..++++|.. ++++.......+.++|.+. +.+....+... ...-..++|.++|++.++ +
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-s 241 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-S 241 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-E
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-c
Confidence 011123346799999964 4555666667788999764 44444444421 124567899999985555 6
Q ss_pred CCCcEEEEEc
Q psy17188 459 SDGNIAVWDL 468 (504)
Q Consensus 459 ~dg~i~iwd~ 468 (504)
+...++++.-
T Consensus 242 E~n~~y~f~~ 251 (255)
T 3qqz_A 242 EPNRFYRFTP 251 (255)
T ss_dssp TTTEEEEEEC
T ss_pred CCceEEEEEe
Confidence 6666666653
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.49 E-value=0.0008 Score=70.95 Aligned_cols=327 Identities=13% Similarity=0.113 Sum_probs=163.3
Q ss_pred CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC------CCEEEEecC-CCcEEEE
Q psy17188 114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD------GRTLIVGGE-ASNLSIW 186 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~-dg~i~iw 186 (504)
..|.+.+.+. . .++.+.++.+.+++++.+. +.......-...|.|+++.|. ++++++|.. |++|+|+
T Consensus 514 ~~I~~As~n~-~-~vvva~g~~l~~fel~~~~----L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 514 KNISVASCNS-S-QVVVAVGRALYYLQIHPQE----LRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp CCCCEEEECS-S-EEEEEETTEEEEEEEETTE----EEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred CEEEEEEeCC-C-EEEEEECCEEEEEEeeCCc----eeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 3455555543 2 3333346778888776532 111222233567999999863 479999986 9999999
Q ss_pred eCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECC--CCeEEEe---ecCCCCCeEEEEEccCCC-
Q psy17188 187 DLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLH--NQTLVRQ---FQGHTDGASCIDISADGT- 258 (504)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~--~~~~~~~---~~~h~~~v~~~~~~~~~~- 258 (504)
++.+.+......+... ....++.+. ....+|..|-.||.+.-+.++ +++.... +-| ..++.=..+...+.
T Consensus 588 sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~ 665 (1158)
T 3ei3_A 588 KLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTT 665 (1158)
T ss_dssp ETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCE
T ss_pred ECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCce
Confidence 9986554333333221 123333332 234588899999988665543 4443321 222 34444334443333
Q ss_pred EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCc
Q psy17188 259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTP 336 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~ 336 (504)
.+++.+ +....++.-+ +++..-.+ ....--....|+.. .+-++..+ ++.+++..+.....
T Consensus 666 ~V~a~s-~rp~liy~~~-~~l~~s~l---------------~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~ 727 (1158)
T 3ei3_A 666 NVFACS-DRPTVIYSSN-HKLVFSNV---------------NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQK 727 (1158)
T ss_dssp EEEEES-SSCEEEEESS-SSEEEEEB---------------SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSS
T ss_pred eEEEEC-CCCEEEEEcC-CceEEecc---------------ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCC
Confidence 333333 4444444332 33321111 11111122334331 23344443 45588887755433
Q ss_pred cceeeeccCCCceeeEEECCCCCCceeeeccC-----------------------------------------------C
Q psy17188 337 RIKAELTSSAPACYALAISPDSKSPFFSSHHY-----------------------------------------------K 369 (504)
Q Consensus 337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------------------------------~ 369 (504)
.....++- ...+..++++|+.+...+++... .
T Consensus 728 ~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 806 (1158)
T 3ei3_A 728 LHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEV 806 (1158)
T ss_dssp EEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEE
T ss_pred eeEEEEeC-CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceee
Confidence 22222222 23666777777666322222110 1
Q ss_pred CeEEEEecCCCCCCCcccccccccCCCceEEEE---EcCC-CCEEEEee----------CCCcEEEeeCCCCCcceeecc
Q psy17188 370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK---LLPD-GRTLIVGG----------EASNLSIWDLASPTPRIKAEL 435 (504)
Q Consensus 370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~---~s~~-g~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~ 435 (504)
.++++.|-.+.+ .+.... ......+.+++ |..+ ..+|++|+ ..|.|++|++...+......
T Consensus 807 s~i~lidp~t~~---~i~~~~-l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~- 881 (1158)
T 3ei3_A 807 HNLLIIDQHTFE---VLHAHQ-FLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAE- 881 (1158)
T ss_dssp EEEEEEETTTCC---EEEEEE-CCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEE-
T ss_pred EEEEEEeCCCCe---EEEEEe-CCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEE-
Confidence 234455543221 111111 12233344444 3322 46888886 34779999987443333222
Q ss_pred cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE
Q psy17188 436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 475 (504)
Q Consensus 436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 475 (504)
....++|++++-- +|+ |++|- ..+|++|++...+.+.
T Consensus 882 ~~v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 882 KEVKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELR 918 (1158)
T ss_dssp EEESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEE
T ss_pred EEcCCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEE
Confidence 2234567776633 354 44443 4679999998765443
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.48 E-value=9.1e-05 Score=66.39 Aligned_cols=230 Identities=10% Similarity=0.076 Sum_probs=135.7
Q ss_pred CCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188 224 DGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300 (504)
Q Consensus 224 dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (504)
...|+.++++... ....+. ....+..++|.+.+. ++++-...+.|..+++..+... ......
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~--------------~~~~~~ 76 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--------------QNVVVS 76 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC--------------CEEEEE
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce--------------EEEEcC
Confidence 4678999988653 112222 223567889998544 4455556678888888765310 001111
Q ss_pred cCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 301 RDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 301 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
.-.....+++.+.+..| ++-...+.|.++++....... ...........+++.|.+..+++.-.+..+.|..+++..
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 22346788998755544 444566789999987543222 222334467899999876653333323467788887754
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
.... .+. ...-.....+++++++..|+.+. ..+.|..+|+......... .........+++.. +.++.+-.
T Consensus 155 ~~~~-~~~----~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~-~~lywtd~ 226 (318)
T 3sov_A 155 SSRF-III----NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFE-DILYWTDW 226 (318)
T ss_dssp CSCE-EEE----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEET-TEEEEEET
T ss_pred CCeE-EEE----ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeC-CEEEEEec
Confidence 2211 110 01233467999999777776664 4577999998754333222 22233456677753 34445555
Q ss_pred CCCcEEEEEcCCcceEEEEe
Q psy17188 459 SDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 459 ~dg~i~iwd~~~~~~~~~~~ 478 (504)
..+.|..++..+|+....+.
T Consensus 227 ~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 227 STHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTTEEEEEETTTCCSCEEEE
T ss_pred CCCeEEEEECCCCCceEEEe
Confidence 67889999988887665554
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.45 E-value=0.00026 Score=63.37 Aligned_cols=230 Identities=8% Similarity=0.038 Sum_probs=138.8
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCcCc
Q psy17188 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPA 205 (504)
Q Consensus 127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 205 (504)
+|+.+....|+.++++.......+. + .......+++|.+.+..|... ...+.|..+++...... ..........
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~-~---~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~ 80 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIV-V---GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLS 80 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEE-E---EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSC
T ss_pred EEEEEccCeEEEEECCCCceEEEEE-e---cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCC
Confidence 5555566789999998653111111 1 122356789999865555544 46678999998765321 1122222234
Q ss_pred eEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEE
Q psy17188 206 CYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVW 282 (504)
Q Consensus 206 v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~ 282 (504)
...+++.+.+. +.++-...+.|.+++++.......+.........+++.|.+..|+... ..+.|...+++.......
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 56788887444 445555677899999875433333334455678999998655655554 357888888765432111
Q ss_pred eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc
Q psy17188 283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP 361 (504)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 361 (504)
....-.....+++++++..|+.+ ...+.|..+|+........ ..........+++..+ .
T Consensus 161 ---------------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~--~~~~~~~P~glav~~~--~- 220 (318)
T 3sov_A 161 ---------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED--I- 220 (318)
T ss_dssp ---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSCCSCEEEEEEETT--E-
T ss_pred ---------------EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE--ecCCCCCceEEEEeCC--E-
Confidence 01123456899999977766665 4567899999875432222 1223345567777433 2
Q ss_pred eeeeccCCCeEEEEecCCCC
Q psy17188 362 FFSSHHYKSCVKVWDISQPG 381 (504)
Q Consensus 362 ~~~~~~~~~~i~i~d~~~~~ 381 (504)
++.+....+.|..++..++.
T Consensus 221 lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 221 LYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCeEEEEECCCCC
Confidence 66667777888888875543
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=5.1e-06 Score=83.16 Aligned_cols=248 Identities=9% Similarity=0.016 Sum_probs=138.5
Q ss_pred CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301 (504)
Q Consensus 223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (504)
....|+..++...+....+. ....+..++|.+.+..|+.+ ...+.|+.+++...... ... .......
T Consensus 384 ~~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-------~~~----~~~i~~~ 451 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------SSY----DTVISRD 451 (699)
T ss_dssp CTTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--------CCC----CCBCCSC
T ss_pred CccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-------cce----EEEEeCC
Confidence 34678888888776655544 33456788999866666554 34578888887751100 000 0000111
Q ss_pred CCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188 302 DNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 302 ~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
......+++.+.+..|+ +-...+.|.++++...... ............+++.|.+..++++-....+.|..+++...
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 12355688886544444 4455678999998754322 22222234567899999877644433333367777776542
Q ss_pred CCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188 381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 459 (504)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~ 459 (504)
....... ..-.....|+|+|++..|+.+ ...+.|..+++....................|++..+ .++++...
T Consensus 530 ~~~~l~~-----~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 530 DIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp CCCEESC-----SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred CeeEEEe-----CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 2111110 112345589999976666555 4556799999875443333222112222334466543 44455556
Q ss_pred CCcEEEEEcCCcceEEEEeecCCceEEEEEc
Q psy17188 460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 490 (504)
Q Consensus 460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 490 (504)
.+.|..++..+++.+..+.......+.|++.
T Consensus 604 ~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 604 NEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred CCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 7899999988888877775433334455443
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.40 E-value=0.00038 Score=70.25 Aligned_cols=241 Identities=10% Similarity=0.012 Sum_probs=140.9
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188 217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ 295 (504)
Q Consensus 217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 295 (504)
+|+.+ ....|+..++........+. ....+..++|.+... ++++-...+.|+.+++....... .. .
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~---------~~--~ 463 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---------SY--D 463 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------C--E
T ss_pred ccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc---------ce--e
Confidence 44433 34568888887665544444 456678999998544 44555566788888887532100 00 1
Q ss_pred ceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188 296 LDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV 374 (504)
Q Consensus 296 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i 374 (504)
............|++.+.++.|+.+ ...+.|.+.++..... .............|++.|....++++-.+..+.|..
T Consensus 464 ~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~ 541 (791)
T 3m0c_C 464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 541 (791)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEE
Confidence 1111123456789999877655554 5567899999875432 222223334678999999877544443344477888
Q ss_pred EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188 375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV 453 (504)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~ 453 (504)
.++........+ ...-.....|++++.+..|+.+. ..+.|..+++....................|++. +..
T Consensus 542 ~~~dG~~~~~lv-----~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~ 614 (791)
T 3m0c_C 542 GGLNGVDIYSLV-----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDK 614 (791)
T ss_dssp EETTSCCEEEEE-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTE
T ss_pred EecCCCceEEEE-----eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCE
Confidence 887643211111 12234677999998777777664 4567999998755443333222222334556664 334
Q ss_pred EEEe-eCCCcEEEEEcCCcceEEEEee
Q psy17188 454 CFSC-CSDGNIAVWDLHNQTLVRQFQG 479 (504)
Q Consensus 454 l~s~-~~dg~i~iwd~~~~~~~~~~~~ 479 (504)
|+.+ ...+.|...+..+|+.+..+..
T Consensus 615 lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 615 VFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp EEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCcceEEeec
Confidence 5444 4567888888888877666653
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.0005 Score=64.72 Aligned_cols=258 Identities=12% Similarity=0.034 Sum_probs=143.3
Q ss_pred ceEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeEEEeecCC---CCCeEEEEE-------ccCCCEEEEEcCCC-----
Q psy17188 205 ACYALAISP-DSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGH---TDGASCIDI-------SADGTKLWTGGLDN----- 267 (504)
Q Consensus 205 ~v~~~~~s~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~s~~~dg----- 267 (504)
....|+|.| +...|+.+. ..+.|++.|++++........- ......++| +++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 357899998 344455444 4467999999988776555432 235889999 99998666665543
Q ss_pred --eEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCC-------CCCc
Q psy17188 268 --TVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLA-------SPTP 336 (504)
Q Consensus 268 --~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~-------~~~~ 336 (504)
.+.+++... +.+. .......+. .......++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~--------~~~~~~~v~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~ 288 (496)
T 3kya_A 220 SPSVYIIKRNADGTFD--------DRSDIQLIA---AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS 288 (496)
T ss_dssp EEEEEEEECCTTSCCS--------TTSCEEEEE---EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC
T ss_pred CceEEEEecCCCCcee--------ecccceeec---cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCcee
Confidence 255565333 2210 000000111 1224567889994 5555566677889999987 4432
Q ss_pred ------c----c-eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC----Cccccc-cc---------
Q psy17188 337 ------R----I-KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQL-DC--------- 391 (504)
Q Consensus 337 ------~----~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~-~~--------- 391 (504)
. . .............++++|+++. ++++-.....|+.++....... ..+.-. ..
T Consensus 289 ~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~-lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~ 367 (496)
T 3kya_A 289 WDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKY-AYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT 367 (496)
T ss_dssp CCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSE-EEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG
T ss_pred ecccccccccccceeEecCCCCCceEEEEcCCCCE-EEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc
Confidence 0 0 1111122335678999999985 4566677888988765432110 000000 00
Q ss_pred ccCCCceE-EEEEc-------CCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-----------C----------CCCce
Q psy17188 392 LQRDNYIR-SVKLL-------PDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------S----------SAPAC 442 (504)
Q Consensus 392 ~~~~~~i~-~~~~s-------~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------~----------~~~~v 442 (504)
...-.... .++.. ++|.++++=..+..|+.++. ++......-.. + .....
T Consensus 368 ~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P 446 (496)
T 3kya_A 368 EARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDV 446 (496)
T ss_dssp GCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSE
T ss_pred ccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCC
Confidence 00112233 44454 45666666566778999984 34221111100 0 11235
Q ss_pred eEEEECCC-CCEEEEeeCCCcEEEEEcCCcceEE
Q psy17188 443 YALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVR 475 (504)
Q Consensus 443 ~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~ 475 (504)
..|+++++ +.++++=..+.+||.++++....+.
T Consensus 447 ~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 447 SGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred cEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 67899886 6655555567889988887665543
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.39 E-value=0.0009 Score=58.25 Aligned_cols=267 Identities=11% Similarity=0.218 Sum_probs=160.0
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT 258 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 258 (504)
++.+|.|.|+..+....+...... +.-.+|..+.+|.-. ..++.++|+++.+.++.+. ....|.-=.|-.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~Ad-----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~~- 118 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN- 118 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCS-----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSS-
T ss_pred CCCEEEEEECCCCCCccccccccc-----eeeeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCCC-
Confidence 345799999988665433333322 244588888777765 6789999999999998888 45677777776544
Q ss_pred EEEEEcCCCeEEEEECCCCc--eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188 259 KLWTGGLDNTVRSWDLREGC--VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW 329 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~ 329 (504)
.|+-.+ +..|+-|++.... .++++.. ..-....|..-..+++.++++..+ -.|.+.+|
T Consensus 119 ~L~lVT-~taVyHWs~~~~s~P~kvFdR~------------~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 185 (365)
T 2xzh_A 119 TVALVT-DNAVYHWSMEGESQPVKMFDRH------------SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 185 (365)
T ss_dssp EEEEEE-SSEEEEEESSTTCCCEEEEECC------------GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEc-CCcEEEEcccCCCCCceeeecc------------hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEE
Confidence 444444 4689999987532 2233211 111246677888889998877643 23678999
Q ss_pred eCCCCCccceeeeccCCCceeeEEECCCCCCc-eeeecc---CCCeEEEEecCCCC-CCCcccc------cccccCCCce
Q psy17188 330 DLASPTPRIKAELTSSAPACYALAISPDSKSP-FFSSHH---YKSCVKVWDISQPG-SKTPVSQ------LDCLQRDNYI 398 (504)
Q Consensus 330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~---~~~~i~i~d~~~~~-~~~~~~~------~~~~~~~~~i 398 (504)
..+.. ....+++|...-..+.+..+.... +++-+. ..+.+++.++.... ....+.. +.........
T Consensus 186 S~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFP 262 (365)
T 2xzh_A 186 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 262 (365)
T ss_dssp ETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCE
T ss_pred eeccc---ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCce
Confidence 88763 455556654443333332221111 222211 23588999985541 1111110 1112234556
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
.++..++.-..++.-+.-|.|++||+.++..+........ .|..-+-..+..-++.....|.|.--.++..
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d--~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC--ceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 6889999888999999999999999999987666554433 3333333333333444445665555554443
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.37 E-value=0.00014 Score=64.55 Aligned_cols=204 Identities=10% Similarity=0.180 Sum_probs=121.2
Q ss_pred CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC----CCC---EEEEEeC---CCc
Q psy17188 256 DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP----DGR---TLIVGGE---ASN 325 (504)
Q Consensus 256 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~---~l~~~~~---dg~ 325 (504)
...+++.....+-+.+||+ +|+.. .... ...++.+..-| .|+ ++++... +++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l----------------~~~~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~ 100 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKML----------------HSYN-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT 100 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEE----------------EEEC-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEE----------------EEcc-CCCcccEEEecccccCCceEeEEEEeCCCCCCCe
Confidence 3456777777889999999 45422 1111 13345555444 222 2333433 478
Q ss_pred EEEEeCCCCCccceeee-----c--cCCCceeeEEE--CCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCC
Q psy17188 326 LSIWDLASPTPRIKAEL-----T--SSAPACYALAI--SPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRD 395 (504)
Q Consensus 326 i~v~d~~~~~~~~~~~~-----~--~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~ 395 (504)
|.+|++...... .... + .....+..+++ ++.....+++....++.+..|++...... ............
T Consensus 101 l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg 179 (355)
T 3amr_A 101 IEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN 179 (355)
T ss_dssp EEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred EEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC
Confidence 999977422111 1112 1 11146677777 77655546777777899999998543211 122223333445
Q ss_pred CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC---cceeec--ccCCCCceeEEEE--CCCCC-EEEEee-CCCcEEEE
Q psy17188 396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT---PRIKAE--LTSSAPACYALAI--SPDSK-VCFSCC-SDGNIAVW 466 (504)
Q Consensus 396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~---~~~~~~--~~~~~~~v~~l~~--s~~~~-~l~s~~-~dg~i~iw 466 (504)
..+..+...+....|+++-++..|..++.+... ...... ...-...+..|++ .++++ +|++++ .+.++.+|
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 678899999988999999998777777754221 112222 2222235777777 55666 666666 57789999
Q ss_pred EcC-CcceEEEEe
Q psy17188 467 DLH-NQTLVRQFQ 478 (504)
Q Consensus 467 d~~-~~~~~~~~~ 478 (504)
|.+ +.+.+..+.
T Consensus 260 dr~~~~~~vg~f~ 272 (355)
T 3amr_A 260 DRQGKNKYVADFR 272 (355)
T ss_dssp ESSTTCCEEEEEE
T ss_pred ECCCCCcEEEEEE
Confidence 997 677777774
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.37 E-value=0.0025 Score=62.77 Aligned_cols=353 Identities=13% Similarity=0.066 Sum_probs=192.2
Q ss_pred CcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCC
Q psy17188 114 EVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS 190 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 190 (504)
..+.+++|++.+..|..+. ++.|..++++.... ..+ +. ........+++.+.+..|+.+ ...+.|.+.+++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v--~~--~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHV--VE--FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE--EC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEE--Ee--CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 4578999998655555443 78999999875321 111 11 122456789998766555444 4567899999875
Q ss_pred CCccceeeeecCcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCC
Q psy17188 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDN 267 (504)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg 267 (504)
.... ......-.....|++.|....|+.... .+.|...+++.......+. .-.....++++++++.|+.+ ...+
T Consensus 112 ~~~~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~ 188 (628)
T 4a0p_A 112 QHRQ--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTN 188 (628)
T ss_dssp TTCE--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTT
T ss_pred CcEE--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCC
Confidence 4322 222233345689999986556665542 4678888876543333233 45577899999976666555 4567
Q ss_pred eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-----
Q psy17188 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL----- 342 (504)
Q Consensus 268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----- 342 (504)
.|...|+.....++. .........+++.. +..+++-...+.|...|..+++.......
T Consensus 189 ~I~~~d~dG~~~~v~----------------~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p 251 (628)
T 4a0p_A 189 LIESSNMLGLNREVI----------------ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYV 251 (628)
T ss_dssp EEEEEETTSCSCEEE----------------EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSC
T ss_pred EEEEEcCCCCceEEe----------------eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCc
Confidence 899999876543221 11123345677654 33344444467787777655432211110
Q ss_pred ------cc-----------CCCceeeEEE----------C-------CCCCC-----ceeeeccCCCeEEEEecCCCCCC
Q psy17188 343 ------TS-----------SAPACYALAI----------S-------PDSKS-----PFFSSHHYKSCVKVWDISQPGSK 383 (504)
Q Consensus 343 ------~~-----------~~~~i~~~~~----------~-------~~~~~-----~~~~~~~~~~~i~i~d~~~~~~~ 383 (504)
.. ..+.+..++. + ++++. .+++. +....|+-..+......
T Consensus 252 ~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~-s~~~~i~~i~l~~~~~~ 330 (628)
T 4a0p_A 252 MDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLF-SQKSAINRMVIDEQQSP 330 (628)
T ss_dssp CEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEE-EETTEEEEECCCTTCCC
T ss_pred ceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeee-eccceEEEEecccccCc
Confidence 00 0001111111 1 11110 01111 11223433333321110
Q ss_pred CcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecc--c--CCCCceeEEEECCCCCEEE-Ee
Q psy17188 384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL--T--SSAPACYALAISPDSKVCF-SC 457 (504)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~--~--~~~~~v~~l~~s~~~~~l~-s~ 457 (504)
.. .+ ....-..+..++|.+.+..|+.+. ..+.|+.++............ . .....+..+++...++.|. +-
T Consensus 331 ~~--~l-~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td 407 (628)
T 4a0p_A 331 DI--IL-PIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTC 407 (628)
T ss_dssp CE--EC-CCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEE
T ss_pred eE--EE-EehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEc
Confidence 00 00 111234577899998777776654 356788888764332222211 0 1234578899998876555 55
Q ss_pred eCCCcEEEEEcCCcceEEEEe-ecCCceEEEEEccCCCEE
Q psy17188 458 CSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKL 496 (504)
Q Consensus 458 ~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l 496 (504)
+..+.|.+.+++ |+....+. .......+|++.|...+|
T Consensus 408 ~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~l 446 (628)
T 4a0p_A 408 EATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYM 446 (628)
T ss_dssp TTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEE
T ss_pred CCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeE
Confidence 567889999985 55444443 334568899998843333
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=0.00021 Score=62.84 Aligned_cols=214 Identities=9% Similarity=0.083 Sum_probs=124.6
Q ss_pred CCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE---cCCCCEEEE
Q psy17188 244 HTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL---LPDGRTLIV 319 (504)
Q Consensus 244 h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~ 319 (504)
...-..+++|++....|..++ ..++|..||...+......+..... .......+..+.| .|+++++++
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~--------~g~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS--------NGDGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCC--------SSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccc--------cCCCcceeeEEEEeccCCCCcEEEE
Confidence 344456789988555555555 7899999999866543221110000 0011223578999 688777775
Q ss_pred Ee-------------CCCcEEEEeCC---CCCccceeeecc-----------CCCceeeEEECCCCCCceeeeccCC-Ce
Q psy17188 320 GG-------------EASNLSIWDLA---SPTPRIKAELTS-----------SAPACYALAISPDSKSPFFSSHHYK-SC 371 (504)
Q Consensus 320 ~~-------------~dg~i~v~d~~---~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~-~~ 371 (504)
.. .+..+..||+. +++......+.. .......++..++|+ .+++++.. +.
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn--aYVt~s~~~~~ 160 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN--SYVAFALGMPA 160 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC--EEEEEEESSCE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC--EEEeCCCCCCe
Confidence 43 25779999998 666555444432 123578999999998 77777776 66
Q ss_pred EEEEecCCCCCCCccccccc--ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc--C---CCCceeE
Q psy17188 372 VKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--S---SAPACYA 444 (504)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~~~v~~ 444 (504)
|...+.... ......... .......+.++++|+|+.|++....|.|..+|+...... ..... + .......
T Consensus 161 I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dg 237 (334)
T 2p9w_A 161 IARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEK 237 (334)
T ss_dssp EEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEE
T ss_pred EEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCccc
Confidence 555554422 111000010 112233669999999998888877999999998843220 11111 1 1122333
Q ss_pred E-EECCCCCE-EEEeeCCCcEEEEEcCC
Q psy17188 445 L-AISPDSKV-CFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 445 l-~~s~~~~~-l~s~~~dg~i~iwd~~~ 470 (504)
+ ..-.+|+. |++....+.+.+.+.+.
T Consensus 238 ilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 238 IVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 3 33347777 44555566666665444
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.28 E-value=0.0011 Score=66.94 Aligned_cols=230 Identities=10% Similarity=0.039 Sum_probs=137.8
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCc--cceeeeecCc
Q psy17188 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTP--RIKAELTSSA 203 (504)
Q Consensus 127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~--~~~~~~~~~~ 203 (504)
+|+......|+..++..... ..+ ......+..++|.+....|+.+ ...+.|+.+++..... .....+....
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~----~~l--~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEY----TSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp EEEEECBSSEEEECTTSCCC----EEE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccccceeEeeccCCcc----eee--ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 55555566788888765321 111 1345668899999865555544 4567788888875321 1122233233
Q ss_pred CceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCceE
Q psy17188 204 PACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL--DNTVRSWDLREGCVK 280 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~ 280 (504)
.....|++.+.+..|+ +-...+.|.+.+++.......+.........|++.|.+..|+.... .+.|.+.++.....+
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 4466788887665444 4456788999998865544444444556899999997556655542 267888888765432
Q ss_pred EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 359 (504)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 359 (504)
.+ ....-.....|++++.+..|+.+. ....|..+++..............-.....|++..+
T Consensus 551 ~l---------------v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-- 613 (791)
T 3m0c_C 551 SL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-- 613 (791)
T ss_dssp EE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--
T ss_pred EE---------------EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--
Confidence 21 112234678999998777776664 456799999876543333222222234456666333
Q ss_pred CceeeeccCCCeEEEEecCCC
Q psy17188 360 SPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 360 ~~~~~~~~~~~~i~i~d~~~~ 380 (504)
. ++++-...+.|...+..++
T Consensus 614 ~-lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 614 K-VFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp E-EEEEETTTTEEEEEETTTC
T ss_pred E-EEEEECCCCEEEEEeCCCC
Confidence 2 6677777788887776544
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.25 E-value=0.00077 Score=61.39 Aligned_cols=239 Identities=12% Similarity=0.114 Sum_probs=121.3
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee---cCcCceEEEEECCC---CCEEEEEeC-C-----CcE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---SSAPACYALAISPD---SKVCFSCCS-D-----GNI 227 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~~~v~~~~~s~~---~~~l~~~~~-d-----g~i 227 (504)
.....++|.|+|+++++ ..++.|.+++ +++......+. ........++|+|+ +..|+++.. + +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999985555 5569999998 33322111111 12345789999998 555554433 2 568
Q ss_pred EEEECCCCe------EEEeec---CCCCCeEEEEEccCCCEEEEEcCC-------------CeEEEEECCCCceEEEeec
Q psy17188 228 AVWDLHNQT------LVRQFQ---GHTDGASCIDISADGTKLWTGGLD-------------NTVRSWDLREGCVKVWDIS 285 (504)
Q Consensus 228 ~iwd~~~~~------~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~~~~~~~~ 285 (504)
..++...++ .+..+. ........++|.|||.+.++.+.. |.|..++.+. ++ .
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~-----p 181 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EP-----A 181 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SB-----C
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CC-----C
Confidence 888876431 122233 111234689999999766664322 3455454432 10 0
Q ss_pred CCCC----CCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCc--------EEEEeCCCCC----------------c
Q psy17188 286 QPGS----KTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASN--------LSIWDLASPT----------------P 336 (504)
Q Consensus 286 ~~~~----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~--------i~v~d~~~~~----------------~ 336 (504)
.... ........... ......++|+| +++++++-..... |.+.. .+. .
T Consensus 182 ~~npf~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~ 258 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYR 258 (352)
T ss_dssp TTCTTTTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSC
T ss_pred CCCcccCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCc
Confidence 0000 00000111111 23467889999 6665554332222 33332 221 0
Q ss_pred cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC-cccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188 337 RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT-PVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414 (504)
Q Consensus 337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 414 (504)
.....+ ........+++ .++. ++++....+.|...+++...... .............+..+++.|||.++++..
T Consensus 259 ~p~~~~-~~~~ap~G~~~-~~G~--l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 259 DPLYFW-PQGFPPGNLAF-FRGD--LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCSEEC-TTCCCEEEEEE-ETTE--EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCeEec-CCCCCCcceEE-ECCE--EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 111111 11224456666 3443 56666667777777776432110 000111112235688999999997666653
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.23 E-value=0.00065 Score=59.78 Aligned_cols=167 Identities=10% Similarity=0.086 Sum_probs=115.2
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCCcEEEEeCCCCCccceeeeec----C--cCceEEEEE---CCCCCEEEEEe----
Q psy17188 157 QRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTS----S--APACYALAI---SPDSKVCFSCC---- 222 (504)
Q Consensus 157 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~----~--~~~v~~~~~---s~~~~~l~~~~---- 222 (504)
.....-.+++|.+....|..++ ..++|..|+...+..... .+.. . ...+..+.| .|+++++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 3344556889988555555554 789999999875432222 2222 1 113579999 68877777543
Q ss_pred ---------CCCcEEEEECC---CCeEEEeecC-------------CCCCeEEEEEccCCCEEEEEcCC-CeEEEEECCC
Q psy17188 223 ---------SDGNIAVWDLH---NQTLVRQFQG-------------HTDGASCIDISADGTKLWTGGLD-NTVRSWDLRE 276 (504)
Q Consensus 223 ---------~dg~i~iwd~~---~~~~~~~~~~-------------h~~~v~~~~~~~~~~~l~s~~~d-g~i~~wd~~~ 276 (504)
.+..|..+|+. +++.+..... -......++..++|+..++++.. +.|...+...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 25779999999 7776654431 11347899999999999999888 8988888876
Q ss_pred CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334 (504)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 334 (504)
.....|....+. .......+.|+++|+|+.|++....+.+..+|+...
T Consensus 169 ~~~~~~~~~~~~----------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 169 KTVSTFAWESGN----------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCEEEEEECCCC----------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CEEeeeeecCCC----------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 666555443211 111233678999999999999877999999998843
No 302
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.23 E-value=0.0069 Score=61.71 Aligned_cols=355 Identities=10% Similarity=0.040 Sum_probs=192.7
Q ss_pred CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC----CCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188 113 GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ----RDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 188 (504)
Q Consensus 113 ~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 188 (504)
...|.++....++++.+... +-+..++..+.. +....... ....|.++...+++..|..|+. +-+..++.
T Consensus 145 ~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~ 218 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGK----FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFP 218 (758)
T ss_dssp CSCEEEEEECTTCCEEEEET-TEEEEEETTTTE----EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEET
T ss_pred CCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCc----eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcC
Confidence 35688998888888777554 457778865531 11111101 1234888888877776555654 45888887
Q ss_pred CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEEEccCCCEEE
Q psy17188 189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISADGTKLW 261 (504)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~ 261 (504)
.+.+......+ ....|.++....++.+.+ |+.+ -+.+++..+++...... .....|.++....+|. |.
T Consensus 219 ~~~~~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW 293 (758)
T 3ott_A 219 STGQIKQTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IW 293 (758)
T ss_dssp TTTEEEEEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EE
T ss_pred CCCeEEeccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EE
Confidence 76543222222 234588888887776554 4444 58888887665432211 1234588888877775 45
Q ss_pred EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188 262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE 341 (504)
Q Consensus 262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 341 (504)
.|+..| +.++.. ......+... ..........|.++.-..+|++ .+|+.+| +..++..++.......
T Consensus 294 iGT~~G-l~~~~~-~~~~~~~~~~---------~~~~~~~~~~v~~i~~D~~g~l-WiGt~~G-l~~~~~~~~~~~~~~~ 360 (758)
T 3ott_A 294 LGTDYG-ISLSRY-NSALQFIPIS---------QITGTGDGNQFYSLFRDSKGFY-WFGGANG-LIRFTDPAGERHDAIW 360 (758)
T ss_dssp EEESSS-EEEECC-CC-CEEEEHH---------HHSCSCCCCBEEEEEECTTCCE-EEEETTE-EEEESCTTSSCCCCEE
T ss_pred EEeCCc-cccccc-CCceeEEecc---------cCCCCCCCceEEEEEEcCCCCE-EEeeCCc-ceeecccccccceeEE
Confidence 555566 544432 2222221110 0000112345888888888874 4455554 6666655422111111
Q ss_pred ec-------cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc--ccCCCceEEEEEcCCCCEEEE
Q psy17188 342 LT-------SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIV 412 (504)
Q Consensus 342 ~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~ 412 (504)
.. .....|.++....++. +.+ +. ++-+..||..+.... ....... ......|.++...++|+ |..
T Consensus 361 ~~~~~~~~~l~~~~v~~i~~d~~g~--lWi-gt-~~GL~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~d~~g~-lWi 434 (758)
T 3ott_A 361 YRMGDKTYPLSHNRIRHIYEDKEQQ--LWI-AT-DGSINRYDYATRQFI-HYNIVDNTGTYNTNWTYYIFEDTAGQ-LWI 434 (758)
T ss_dssp ECTTCSSSCCSCSCEEEEEECTTSC--EEE-EE-TTEEEEEETTTTEEE-EEEEECCC--CBSSSEEEEEECTTSE-EEE
T ss_pred eccCCcCCCCCCCceEEEEECCCCC--EEE-Ee-CCcHhhcCcCCCcEE-EeecCCCcCCCCCceEEEEEEcCCCC-EEE
Confidence 11 1123567777666665 333 33 346888887653211 1100000 01234578888887775 555
Q ss_pred eeCCCcEEEeeCCCC-----Ccce---eec-cc-CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee---
Q psy17188 413 GGEASNLSIWDLASP-----TPRI---KAE-LT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--- 479 (504)
Q Consensus 413 ~~~dg~i~iwd~~~~-----~~~~---~~~-~~-~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--- 479 (504)
|+..+-|.++|..+. .... ... .. -....|.++...++|++.+.++..+-|..+|.++++... +..
T Consensus 435 gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~-~~~~~~ 513 (758)
T 3ott_A 435 STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTK-LFADEL 513 (758)
T ss_dssp EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEE-ECTTTS
T ss_pred EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEE-ecCCCc
Confidence 666666888885421 1010 000 11 122358889999999877643334458889987765443 221
Q ss_pred -cCCceEEEEEccCCCEEEE
Q psy17188 480 -HTDGASCIDISADGTKLWT 498 (504)
Q Consensus 480 -h~~~v~~~~~s~d~~~l~s 498 (504)
....+.++....+|+..+.
T Consensus 514 ~~~~~~~~i~~d~~g~lWig 533 (758)
T 3ott_A 514 TGEKSPNYLLCDEDGLLWVG 533 (758)
T ss_dssp CGGGCEEEEEECTTSCEEEE
T ss_pred CCCcccceEEECCCCCEEEE
Confidence 1235778887777766543
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.21 E-value=0.0032 Score=57.17 Aligned_cols=267 Identities=11% Similarity=0.205 Sum_probs=162.3
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT 258 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 258 (504)
.+.+|.|.|+..+........... +.-.+|..+.++.-. ..++.|+|+++.+.+..+.- ...|.-=.|-.+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~- 117 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN- 117 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS-----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-
T ss_pred CCCeEEEEECCCCCcceecccccc-----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-
Confidence 445799999987665433333322 345688888777665 67899999999999988874 4566666776544
Q ss_pred EEEEEcCCCeEEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188 259 KLWTGGLDNTVRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW 329 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~ 329 (504)
.|+-.+ +..|+-|++... -.++++... .-....|..-..+++.++++..+ -.|.+.+|
T Consensus 118 ~l~lVT-~taVyHWsi~~~s~P~kvFdR~~------------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 118 TVALVT-DNAVYHWSMEGESQPVKMFDRHS------------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp EEEEEC-SSEEEEEESSSSCCCEEEEECCG------------GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEc-CCeeEEecccCCCCchhheecch------------hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 454444 568999999653 233332111 11246678888899999877543 23678999
Q ss_pred eCCCCCccceeeeccCCCceeeEEECCCCCCc-eeeecc---CCCeEEEEecCCCC-CCCccc------ccccccCCCce
Q psy17188 330 DLASPTPRIKAELTSSAPACYALAISPDSKSP-FFSSHH---YKSCVKVWDISQPG-SKTPVS------QLDCLQRDNYI 398 (504)
Q Consensus 330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~---~~~~i~i~d~~~~~-~~~~~~------~~~~~~~~~~i 398 (504)
..+.. ....+.+|...-..+.+..+.... +++-+. ..+.+.+.++.... ....+. .+.........
T Consensus 185 S~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP 261 (494)
T 1bpo_A 185 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 261 (494)
T ss_dssp ESTTC---CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE
T ss_pred ecccc---ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCce
Confidence 98764 445556665444333333222111 222221 23789999986541 111111 01111234556
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 471 (504)
.++..++.-..++.-+.-|.|++||+.++..+....... ..|...+-..+..-++.....|.|.--.++..
T Consensus 262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~--~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred eEEEecccCCEEEEEecCceEEEEecccceeeeeecccC--CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 689999988899999999999999999998776655443 33433344444444454556666655555443
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=0.00063 Score=64.06 Aligned_cols=259 Identities=9% Similarity=0.077 Sum_probs=137.2
Q ss_pred ceEEEEEcc-CCCEEEEec-CCCcEEEEeCCCCCccceeeeec-CcCceEEEEE-------CCCCCEEEEEeCCC-c---
Q psy17188 161 YIRSVKLLP-DGRTLIVGG-EASNLSIWDLASPTPRIKAELTS-SAPACYALAI-------SPDSKVCFSCCSDG-N--- 226 (504)
Q Consensus 161 ~v~~~~~s~-~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~-------s~~~~~l~~~~~dg-~--- 226 (504)
....|+|+| +...|+.+. ..+.|++.|++++.......... .......++| +++++.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 355555543 34678888887654322221111 2235789999 99999666665543 2
Q ss_pred ---EEEEECCC-CeEE-----EeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECC-------CCce-EEEeecCCC
Q psy17188 227 ---IAVWDLHN-QTLV-----RQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLR-------EGCV-KVWDISQPG 288 (504)
Q Consensus 227 ---i~iwd~~~-~~~~-----~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~-------~~~~-~~~~~~~~~ 288 (504)
|.+++... ++.. ..+.. -.....++++| ++.++++-..++.|..+|+. ++.+ ........+
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 66665333 2211 11211 12345678888 45556666677889999987 4542 000000000
Q ss_pred CCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeecc---------------CCCcee
Q psy17188 289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTS---------------SAPACY 350 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~---------------~~~~i~ 350 (504)
....+...........++|+|+|++|+++ .....|+.++........ ...+.+ .-....
T Consensus 299 ---~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 299 ---TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp ---TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred ---ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 00011112223456799999999965555 456678886654321111 001100 001223
Q ss_pred -eEEEC-------CCCCCceeeeccCCCeEEEEecCCCCCCCcccc-------------------cccccCCCceEEEEE
Q psy17188 351 -ALAIS-------PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-------------------LDCLQRDNYIRSVKL 403 (504)
Q Consensus 351 -~~~~~-------~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------~~~~~~~~~i~~~~~ 403 (504)
.+... .++. ++++-..+..|+.++.. + ....+.- ......-.....+++
T Consensus 376 ~gv~vd~~~~~~~~~g~--lyVaD~~N~rIr~i~~~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYD--FYFVDRLNFCVRKVTPE-G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEECTTCCSSCCEE--EEEEEGGGTEEEEECTT-C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred EEEEEccccccccCCCe--EEEEECCCCEEEEEeCC-C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 34443 3333 77777778899998832 2 1111100 000011234678999
Q ss_pred cCC-CCEEEEeeCCCcEEEeeCCCC
Q psy17188 404 LPD-GRTLIVGGEASNLSIWDLASP 427 (504)
Q Consensus 404 s~~-g~~l~~~~~dg~i~iwd~~~~ 427 (504)
+++ |.++++=..+..|+.++++..
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCC
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCC
Confidence 986 665555555677888887654
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.19 E-value=0.0015 Score=58.10 Aligned_cols=185 Identities=15% Similarity=0.287 Sum_probs=111.8
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCE--EEEe-c-C--CCcEEEEeCCCCCccce
Q psy17188 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRT--LIVG-G-E--ASNLSIWDLASPTPRIK 196 (504)
Q Consensus 127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--l~~~-~-~--dg~i~iw~~~~~~~~~~ 196 (504)
+|.+.-++-+.+||++ ++ .+..+ . .+.++.+..-|+ |+. |+.+ . . +++|.+|++...... .
T Consensus 43 ii~t~k~~gL~Vydl~-G~---~l~~~---~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 43 LITTNKKSGLVVYSLD-GK---MLHSY---N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp EEEEETTTEEEEEETT-SC---EEEEE---C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred EEEEcCCCCEEEEcCC-Cc---EEEEc---c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 3444447899999994 32 22222 2 256677766662 322 3333 3 3 578999977422211 1
Q ss_pred eeee-------cCcCceEEEEE--CCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEeecCCCCCeEEEEEccCCC
Q psy17188 197 AELT-------SSAPACYALAI--SPD-SK-VCFSCCSDGNIAVWDLH-------NQTLVRQFQGHTDGASCIDISADGT 258 (504)
Q Consensus 197 ~~~~-------~~~~~v~~~~~--s~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~~~~~~~~~ 258 (504)
..+. .....+..+|+ +|. ++ ++++...+|.+..|++. +.+.++++. ..+.+..+...+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCC
Confidence 1121 11145667777 774 44 68888889999999883 346778887 456788999998888
Q ss_pred EEEEEcCCCeEEEEECCCCc---eEEEeecCCCCCCCcccceecccCCceEEEEE--cCCCC-EEEEEe-CCCcEEEEeC
Q psy17188 259 KLWTGGLDNTVRSWDLREGC---VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL--LPDGR-TLIVGG-EASNLSIWDL 331 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~-~dg~i~v~d~ 331 (504)
.|+.+-++.-|..++.+... ..+.. ..........+..+++ .++++ +|++++ .+..+.+||.
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~-----------~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVID-----------RADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEE-----------EBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEE-----------EecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 99999998777777744211 11100 1111112235777777 55666 666666 5668999998
Q ss_pred C
Q psy17188 332 A 332 (504)
Q Consensus 332 ~ 332 (504)
+
T Consensus 262 ~ 262 (355)
T 3amr_A 262 Q 262 (355)
T ss_dssp S
T ss_pred C
Confidence 6
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.15 E-value=0.0042 Score=56.48 Aligned_cols=241 Identities=14% Similarity=0.096 Sum_probs=121.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEeec---CCCCCeEEEEEccC---CCEEEEEcC-C-----CeEE
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQ---GHTDGASCIDISAD---GTKLWTGGL-D-----NTVR 270 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~-d-----g~i~ 270 (504)
....++|.|+|++++ +..++.|.+++ +++. +..+. ........++++|+ +..|+.+.. + +.|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 457899999998554 55679999998 4432 22221 22456899999998 555554433 2 5777
Q ss_pred EEECCCCceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCCCc
Q psy17188 271 SWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWDLASPTP 336 (504)
Q Consensus 271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~~ 336 (504)
.++...+.+...... +..+.. .........++|.|+|.+.++.+. .|.|..++....-.
T Consensus 109 r~~~~~~~~~~~~~l-------~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 109 RLRHLGERGVLDRVV-------LDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp EEEECSSCEEEEEEE-------EEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred EEEeCCCCcCceEEE-------EEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 888765432100000 000000 011123468999999976555332 14566666543100
Q ss_pred ----------cceeeeccCCCceeeEEECCCCCCceeeeccCCC-------eEEEEecCCCCCC----------C--ccc
Q psy17188 337 ----------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-------CVKVWDISQPGSK----------T--PVS 387 (504)
Q Consensus 337 ----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~i~i~d~~~~~~~----------~--~~~ 387 (504)
...............++|.|+...++++-.+.+. .|.+. ..+... . ...
T Consensus 182 ~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcC
Confidence 0000111112246788999954443333333332 23332 222100 0 000
Q ss_pred ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce----eecccCCCCceeEEEECCCCCEEEEee
Q psy17188 388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI----KAELTSSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
.............++| .+|.++++.-..+.|...+++...... ...+......+..+++.|||.++++..
T Consensus 260 p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 260 PLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 1111122234567777 466666665566678777776433210 111112234678899999998777654
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.13 E-value=0.0022 Score=58.30 Aligned_cols=239 Identities=15% Similarity=0.120 Sum_probs=122.3
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee---ecCcCceEEEEECCC---CCEEEEEeC----C----C
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---TSSAPACYALAISPD---SKVCFSCCS----D----G 225 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~s~~---~~~l~~~~~----d----g 225 (504)
.....++|.|+|+++++ ..++.|++++. +++ .....+ .........|+++|+ +..|+++.. + .
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45679999999985555 55699999873 333 222211 112345789999997 445554433 2 5
Q ss_pred cEEEEECCCC-------eEE-EeecC-CCCCeEEEEEccCCCEEEEEcCC-------------CeEEEEECCCCceEEEe
Q psy17188 226 NIAVWDLHNQ-------TLV-RQFQG-HTDGASCIDISADGTKLWTGGLD-------------NTVRSWDLREGCVKVWD 283 (504)
Q Consensus 226 ~i~iwd~~~~-------~~~-~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~~~~~~ 283 (504)
.|..|+.... +.+ ..+.. .......+.|.|||.++++.+.. |.|..++.+.. +
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~-~---- 180 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR-P---- 180 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC-C----
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC-C----
Confidence 6777877654 111 11221 11234679999999876664432 34444443321 0
Q ss_pred ecCCCCCCCc--ccceecccCCceEEEEEcC-CCCEEEEEeCCC---cEEEEeCCC--------CC------ccceeeec
Q psy17188 284 ISQPGSKTPV--SQLDCLQRDNYIRSVKLLP-DGRTLIVGGEAS---NLSIWDLAS--------PT------PRIKAELT 343 (504)
Q Consensus 284 ~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~v~d~~~--------~~------~~~~~~~~ 343 (504)
+ ...+. ..+.... ......++|+| +++++++-.... .|.+..... .. ........
T Consensus 181 ---p-~~npf~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 255 (354)
T 3a9g_A 181 ---P-ADNPFPNSPIWSYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG 255 (354)
T ss_dssp ---C-TTSSSTTCCEEEEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ---C-CCCCCCCCcEEEEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC
Confidence 0 00000 0111112 23356899999 666544432221 243332111 00 01111221
Q ss_pred cCCCceeeEEEC-------CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188 344 SSAPACYALAIS-------PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414 (504)
Q Consensus 344 ~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 414 (504)
........+++. .++. ++++....+.|...++...........+ .......+..+++.|||.+.++..
T Consensus 256 ~~~~ap~G~~~y~g~~fp~~~G~--l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 256 SETWAPSGASFVHGDMFPGLRGW--LLIACLRGSMLAAVNFGDNMEVRKISTF-FKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TCCCCEEEEEECCSSSCGGGTTE--EEEEETTTTEEEEEEECGGGCEEEEEEE-CTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcCCcceEEECCCCCcccCCc--EEEEEcCCCEEEEEEECCCCcccceeee-ccCCCCCeeEEEECCCCcEEEEEe
Confidence 123356777774 3343 6666666778888887643211101111 111245688999999997666653
No 308
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.12 E-value=0.011 Score=60.09 Aligned_cols=385 Identities=12% Similarity=0.081 Sum_probs=205.0
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceee--ecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINT--LSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT 148 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~ 148 (504)
...|.++.-..+|.+- ++. .+.+..++-.. .+.... ......|.++....++.+.+...+ -+..||..+..-..
T Consensus 21 ~n~V~~I~qD~~G~lW-igT-~~GL~ryDG~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~-Gl~~yd~~~~~f~~ 96 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGS-NKGLFSYDGYS-TQQHFTYGENNNTRIYCGVIIDNTYLYMGTDN-GILVYNYRADRYEQ 96 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEE-SSCEEEECSSC-EEECSCTTSTTSSCEEEEEEETTTEEEEEETT-EEEEEETTTTEECC
T ss_pred cceEEEEEECCCCCEE-EEE-CCCccccCCCc-eEEEEccCCCCCceEEEEEEcCCCcEEEEeCC-CeEEEeCCCCEEEC
Confidence 3457777776666433 222 23444443211 011100 112456899888888876665544 57889976632111
Q ss_pred ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee--ecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL--TSSAPACYALAISPDSKVCFSCCSDGN 226 (504)
Q Consensus 149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~ 226 (504)
. .......|.++.. .++ .|..++.+ .|..++..+.+....... ......|.++....++.+.+ ++.+ -
T Consensus 97 ~-----~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-G 166 (758)
T 3ott_A 97 P-----ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-G 166 (758)
T ss_dssp C-----SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-E
T ss_pred c-----ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-C
Confidence 0 0012345777754 355 45556555 688888775442211000 11234588888887776555 4444 4
Q ss_pred EEEEECCCCeEEEee-cC----CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188 227 IAVWDLHNQTLVRQF-QG----HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301 (504)
Q Consensus 227 i~iwd~~~~~~~~~~-~~----h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (504)
|..++..+++..... .. ....|.++...+++..|..++. +-+..+|..+++...+. . ..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-----------~----l~ 230 (758)
T 3ott_A 167 LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-----------A----FH 230 (758)
T ss_dssp EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-----------E----EE
T ss_pred HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-----------C----CC
Confidence 788898777643221 11 1234788888777766555654 45888998877653221 0 11
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-----ccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188 302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376 (504)
Q Consensus 302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d 376 (504)
...|.++....+|.+.+ |+.+ -+.+++..+......... .-....|.++....++. +..+...| +.++.
T Consensus 231 ~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~---lWiGT~~G-l~~~~ 304 (758)
T 3ott_A 231 NNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN---IWLGTDYG-ISLSR 304 (758)
T ss_dssp EEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC---EEEEESSS-EEEEC
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC---EEEEeCCc-ccccc
Confidence 34588888888887544 4544 477888765432211111 01223577777776665 33333445 44443
Q ss_pred cCCCCCCCcccc--cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc--eeecc-----cCCCCceeEEEE
Q psy17188 377 ISQPGSKTPVSQ--LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKAEL-----TSSAPACYALAI 447 (504)
Q Consensus 377 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~--~~~~~-----~~~~~~v~~l~~ 447 (504)
... ....... .........|.++.-..+|.+.+ |+.+| +..++..++... ..... .-....|.++.-
T Consensus 305 ~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 380 (758)
T 3ott_A 305 YNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYE 380 (758)
T ss_dssp CCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEE
T ss_pred cCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEE
Confidence 211 1111100 00011234688888888887544 44554 666765543211 11111 112235888888
Q ss_pred CCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-e-----cCCceEEEEEccCCCEEE
Q psy17188 448 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-G-----HTDGASCIDISADGTKLW 497 (504)
Q Consensus 448 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-----h~~~v~~~~~s~d~~~l~ 497 (504)
..++++.+ |+. +-+..||.++++...-.. . ....|.++.-..+|+..+
T Consensus 381 d~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi 434 (758)
T 3ott_A 381 DKEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI 434 (758)
T ss_dssp CTTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE
T ss_pred CCCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE
Confidence 88887655 444 469999988775432211 1 123578888777765444
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.07 E-value=0.00065 Score=60.48 Aligned_cols=107 Identities=13% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCCEEEEec-CC-----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCe--
Q psy17188 170 DGRTLIVGG-EA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT-- 236 (504)
Q Consensus 170 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~-- 236 (504)
++..++.|+ .+ ..+.+||+.+.+......+.........+. .++.+++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666666 32 368899988765433332222211122222 256677777754 468999988765
Q ss_pred ---EEEeecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceE
Q psy17188 237 ---LVRQFQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVK 280 (504)
Q Consensus 237 ---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~ 280 (504)
.+..+.........+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 23222222222222222 56677777654 36888998887754
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.07 E-value=5.4e-05 Score=75.79 Aligned_cols=227 Identities=11% Similarity=0.002 Sum_probs=127.5
Q ss_pred CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEEECCC----CeEEEeecCCCCCeEEEEEc
Q psy17188 180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHN----QTLVRQFQGHTDGASCIDIS 254 (504)
Q Consensus 180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~ 254 (504)
.+.|+..++...+... .+ .....+..++|.+.+..|+.+. ..+.|+.+++.. ......+.........|++.
T Consensus 385 ~~~I~~id~~~~~~~~--~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTS--LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEEC--CS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCccee--ee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 4577778877544221 11 1223456789998766666554 457899999875 22222222222345667887
Q ss_pred cC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeC
Q psy17188 255 AD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDL 331 (504)
Q Consensus 255 ~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~ 331 (504)
+. ++++++-...+.|.++++........ ..........++++|.+.+|+.+.. .+.|.++++
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l---------------~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTL---------------FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEE---------------CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEE---------------EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 54 44445545667899998876543221 0111234577889987666665543 267888777
Q ss_pred CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188 332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411 (504)
Q Consensus 332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 411 (504)
........ ..........|+++++++. ++++-...+.|..+++........... .........+++..+ .+++
T Consensus 527 dG~~~~~l--~~~~l~~PnGlavd~~~~~-LY~aD~~~~~I~~~d~dG~~~~~~~~~---~~~~~~P~glavd~~-~lyw 599 (699)
T 1n7d_A 527 NGVDIYSL--VTENIQWPNGITLDLLSGR-LYWVDSKLHSISSIDVNGGNRKTILED---EKRLAHPFSLAVFED-KVFW 599 (699)
T ss_dssp SSCCCCEE--SCSSCSSCCCEEECTTTCC-EEEEETTTTEEEEECSSSSCCEEECCC---SSSCSSCCCCEEETT-EEEE
T ss_pred CCCCeeEE--EeCCCCCccEEEEeccCCE-EEEEecCCCeEEEEccCCCceEEEEec---CCcCCCceEeEEECC-EEEE
Confidence 54322211 1122335678999998776 556666788999999864322111110 011122335566544 3444
Q ss_pred EeeCCCcEEEeeCCCCCcce
Q psy17188 412 VGGEASNLSIWDLASPTPRI 431 (504)
Q Consensus 412 ~~~~dg~i~iwd~~~~~~~~ 431 (504)
+....+.|..++..+++...
T Consensus 600 td~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 600 TDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp ECSTTTCEEEEETTTEEEEE
T ss_pred EeCCCCeEEEEEccCCCceE
Confidence 55566789999877665433
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.04 E-value=0.0093 Score=56.17 Aligned_cols=106 Identities=11% Similarity=0.122 Sum_probs=62.9
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeec------CcCceEEEEECCC---CCEEEEEeC-------
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS------SAPACYALAISPD---SKVCFSCCS------- 223 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~s~~---~~~l~~~~~------- 223 (504)
.....|+|.|+|+++++-...+.|++++..+++......+.. .......|+|+|+ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999977776544578888765444322222221 2455779999995 455554432
Q ss_pred ------CCcEEEEECCCC-------eEEE-eecC-CCCCeEEEEEccCCCEEEEEcC
Q psy17188 224 ------DGNIAVWDLHNQ-------TLVR-QFQG-HTDGASCIDISADGTKLWTGGL 265 (504)
Q Consensus 224 ------dg~i~iwd~~~~-------~~~~-~~~~-h~~~v~~~~~~~~~~~l~s~~~ 265 (504)
...|.-+++..+ +.+. .+.. .......|.|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 134655655321 1111 1221 1234689999999987776553
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.02 E-value=0.0077 Score=54.75 Aligned_cols=243 Identities=13% Similarity=0.072 Sum_probs=125.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEeec---CCCCCeEEEEEccC---CCEEEEEcC----C----Ce
Q psy17188 204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQ---GHTDGASCIDISAD---GTKLWTGGL----D----NT 268 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~----d----g~ 268 (504)
.....++|.|++++ +++..+|.|++++ .+++ .+..+. ........|+++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34678999999974 4456679999997 4454 222221 22356889999997 445554432 3 56
Q ss_pred EEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCC
Q psy17188 269 VRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWDLAS 333 (504)
Q Consensus 269 i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~ 333 (504)
|..|+...+ .+..... .+..+. .........++|.|+|.+.++.+. .|.|..++...
T Consensus 107 v~r~~~~~~~~~~~~~~~-------l~~~~~-~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKT-------LIDGIP-GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp EEEEEECSSSCCEEEEEE-------EEEEEE-CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred EEEEEECCCCcCcCccEE-------EEEcCC-CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 777776654 1110000 000011 011123467999999986665432 24566665542
Q ss_pred CCcc-----ceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEEEEecCCCCC-----------C-Ccccccccc-c
Q psy17188 334 PTPR-----IKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVKVWDISQPGS-----------K-TPVSQLDCL-Q 393 (504)
Q Consensus 334 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~-----------~-~~~~~~~~~-~ 393 (504)
.-.. ..............++|.|+...++++-...+. .|.+.. .+.. . ......... .
T Consensus 179 ~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 256 (354)
T 3a9g_A 179 RPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGS 256 (354)
T ss_dssp CCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCC
Confidence 2000 001111112246789999944432333323222 233322 1110 0 000011111 1
Q ss_pred CCCceEEEEEc-------CCCCEEEEeeCCCcEEEeeCCCC-Ccceeec-ccCCCCceeEEEECCCCCEEEEee
Q psy17188 394 RDNYIRSVKLL-------PDGRTLIVGGEASNLSIWDLASP-TPRIKAE-LTSSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 394 ~~~~i~~~~~s-------~~g~~l~~~~~dg~i~iwd~~~~-~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
.......++|. .+|.++++.-..+.|...++... +...... +......+..+++.|||.+.++..
T Consensus 257 ~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 257 ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 23456788884 46777776666777888888743 2211112 222245688899999998766654
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.02 E-value=0.0012 Score=58.70 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=57.1
Q ss_pred CCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEe-
Q psy17188 171 GRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ- 240 (504)
Q Consensus 171 ~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~- 240 (504)
+..++.|+.+ ..+.+||+.+.+......+......-..+.+ ++.+++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455555533 3588888877654332222221111122222 66677777754 3588999988754332
Q ss_pred -ecCCCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCCCceE
Q psy17188 241 -FQGHTDGASCIDISADGTKLWTGGLDN-----TVRSWDLREGCVK 280 (504)
Q Consensus 241 -~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~ 280 (504)
+.........+.+ +++.++.|+.++ .+.+||+.+.+..
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 2211112222222 566777777653 5778888887654
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.01 E-value=0.0023 Score=56.98 Aligned_cols=232 Identities=11% Similarity=0.101 Sum_probs=117.9
Q ss_pred CEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEe--ecC
Q psy17188 172 RTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQTLVRQ--FQG 243 (504)
Q Consensus 172 ~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~--~~~ 243 (504)
.+++.|+. ...+.+||..+.+......+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+-... +..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555553 35789999887665433333222222222332 66677777754 5688999988754332 221
Q ss_pred CCCCeEEEEEccCCCEEEEEcCC------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188 244 HTDGASCIDISADGTKLWTGGLD------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL 317 (504)
Q Consensus 244 h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 317 (504)
.......+.+ ++++++.|+.+ ..+.+||+.+.+..... . .. ........+.+ +++.+
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~--------~p--~~r~~~~~~~~--~~~iy 153 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---S--------ML--TQRCSHGMVEA--NGLIY 153 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE--TTEEE
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---C--------Cc--CCcceeEEEEE--CCEEE
Confidence 1112222222 56677777765 46889999888654321 0 00 00011112222 56666
Q ss_pred EEEeC---------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCCCCCC
Q psy17188 318 IVGGE---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQPGSK 383 (504)
Q Consensus 318 ~~~~~---------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~ 383 (504)
+.|+. ...+.+||..+.+......+.........+.+ +++ +++.|+.+ ..+.+||..+..-.
T Consensus 154 v~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDK--IFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp EECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE--EEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred EECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCE--EEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 66643 34588999988765444333322212222222 333 55555543 45788888654211
Q ss_pred CcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCCcce
Q psy17188 384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPRI 431 (504)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~~~~ 431 (504)
. +.... ........+.+ ++++++.|+.+ ..+.+||+.+.+...
T Consensus 230 ~-~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 230 M-VSPMP--WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp E-CCCCS--CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred E-CCCCC--CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 0 00000 01111122223 67777888754 458888888654433
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.98 E-value=0.0036 Score=55.59 Aligned_cols=187 Identities=17% Similarity=0.237 Sum_probs=98.1
Q ss_pred CCCEEEEecCC-----CcEEEEeCCCCC---ccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCe
Q psy17188 170 DGRTLIVGGEA-----SNLSIWDLASPT---PRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT 236 (504)
Q Consensus 170 ~~~~l~~~~~d-----g~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~ 236 (504)
+++.++.|+.+ ..+.+||+.+.+ ......+......-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 67777777754 469999998776 4433333322222222333 56677777643 358899988775
Q ss_pred EEEe--ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+..... + .. ........+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~--------~p--~~r~~~~~~~ 204 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT---P--------MA--TKRSGAGVAL 204 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEE
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC---C--------CC--cccccceEEE
Confidence 4332 2211111222222 56677777754 46889999888654321 0 00 0001112222
Q ss_pred EcCCCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCC
Q psy17188 310 LLPDGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQ 379 (504)
Q Consensus 310 ~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~ 379 (504)
+ +++.++.|+.+ ..+.+||+.+.+......+.........+.+ +++ +++.++.+ ..+.+||.++
T Consensus 205 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 205 L--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR--LYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp E--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE--EEEECCBCSSSBEEEEEEEETTT
T ss_pred E--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE--EEEEcCcCCCcccccEEEEcCCC
Confidence 2 56677777653 4689999988765544333322222222222 333 55555443 3466666654
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.97 E-value=0.0067 Score=53.95 Aligned_cols=228 Identities=10% Similarity=0.116 Sum_probs=117.7
Q ss_pred EEEEEeC--CCcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCC
Q psy17188 217 VCFSCCS--DGNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPG 288 (504)
Q Consensus 217 ~l~~~~~--dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~ 288 (504)
+++.|+. ...+.+||..+++-... +.........+. -++.+++.|+.+ ..+.+||+.+++......
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~---- 87 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG---- 87 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC----
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC----
Confidence 4555554 35799999988764432 221111222222 256677777755 578889998886543210
Q ss_pred CCCCcccceecccCCceEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188 289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF 362 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 362 (504)
.. ........+.+ +++.++.|+.+ ..+.+||..+.+......+.........+. -+++ +
T Consensus 88 -------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~--i 152 (306)
T 3ii7_A 88 -------PP--TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGL--I 152 (306)
T ss_dssp -------CS--SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE--E
T ss_pred -------CC--ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCE--E
Confidence 00 00111122222 56677777654 458899998876544433332221212222 2333 5
Q ss_pred eeeccC---------CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCC
Q psy17188 363 FSSHHY---------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPT 428 (504)
Q Consensus 363 ~~~~~~---------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~ 428 (504)
++.++. ...+.+||..+..- ...........-..++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPATETW----TELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTTTEE----EEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EEECCCCCCCCcccccceEEEeCCCCCeE----EECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 555543 34578888765421 111111111111122222 66777777654 358999998765
Q ss_pred cceeecccCCCCceeEEEECCCCCEEEEeeCC-----CcEEEEEcCCcc
Q psy17188 429 PRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT 472 (504)
Q Consensus 429 ~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 472 (504)
................+.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 228 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 228 WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 4433333322222233333 67778888754 468899988764
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.97 E-value=0.0026 Score=56.75 Aligned_cols=233 Identities=13% Similarity=0.149 Sum_probs=116.3
Q ss_pred CCCEEEEecC----CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----C-----CcEEEEECCCCe
Q psy17188 170 DGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----D-----GNIAVWDLHNQT 236 (504)
Q Consensus 170 ~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~iwd~~~~~ 236 (504)
++..++.|+. -..+.+||..+.+......+......-..+.+ ++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 5666666663 23588888887654333222221111122222 5667777665 2 468999998876
Q ss_pred EEEe--ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188 237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309 (504)
Q Consensus 237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 309 (504)
-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+..... + .. ........+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~ 166 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA---P--------ML--TRRIGVGVAV 166 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECC---C--------CS--SCCBSCEEEE
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECC---C--------CC--ccccceEEEE
Confidence 4332 1111112222222 56677776644 36888998887643221 0 00 0011112222
Q ss_pred EcCCCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCC
Q psy17188 310 LLPDGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQ 379 (504)
Q Consensus 310 ~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~ 379 (504)
+ +++.++.|+.+ ..+.+||..+.+......+.........+.+ +++ +++.++.+ ..+.+||+.+
T Consensus 167 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 167 L--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNC--IYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp E--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE--EEEECCBCSSSBCCCEEEEETTT
T ss_pred E--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCE--EEEEeCCCCCCccceEEEEeCCC
Confidence 2 56667776544 4589999987755444333322222222222 333 55666543 5688898865
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCCcc
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPR 430 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~~~ 430 (504)
..-. ..........-..++. -++++++.|+.+ ..+.+||+.+.+..
T Consensus 241 ~~W~----~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 241 ETWT----FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TEEE----ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CcEE----ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 4211 1100111111112222 256777777654 34778888765433
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.94 E-value=0.0016 Score=58.69 Aligned_cols=192 Identities=15% Similarity=0.181 Sum_probs=113.0
Q ss_pred ceEEEEEcCCCCEEEEE------------eCCCcEEEEeCCCCCcc-ceeeecc-----CCCceeeEEECC--CCCCcee
Q psy17188 304 YIRSVKLLPDGRTLIVG------------GEASNLSIWDLASPTPR-IKAELTS-----SAPACYALAISP--DSKSPFF 363 (504)
Q Consensus 304 ~v~~~~~~~~~~~l~~~------------~~dg~i~v~d~~~~~~~-~~~~~~~-----~~~~i~~~~~~~--~~~~~~~ 363 (504)
....+...|+|..++++ ..+|.|.++|.++.... ....+.. .......+.+.+ ++...++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 35667788877554444 26899999998743222 1222222 234666777766 3443344
Q ss_pred eeccC--CCeEEEEecCCCCCCCcc-cccccccCCCceEEEEEcCCCCEEEEeeC-----------------CCcEEEee
Q psy17188 364 SSHHY--KSCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----------------ASNLSIWD 423 (504)
Q Consensus 364 ~~~~~--~~~i~i~d~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-----------------dg~i~iwd 423 (504)
++... +..+.+|+++........ .... ...-...+.+++.++|.+.++... .|.|+-+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~-g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIR-HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEEC-CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccc-cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 44333 578889888764322211 1111 123456789999999987776541 23455555
Q ss_pred CCCCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEcCC-cce--EEEEeecCCceEEEEEcc-CCCEEEE
Q psy17188 424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHN-QTL--VRQFQGHTDGASCIDISA-DGTKLWT 498 (504)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~~~~s~-d~~~l~s 498 (504)
. ++.... .......+.++|+||++.|..+. ..+.|+.|++.. ++. ...+ ...+..-.+++.+ +|++.++
T Consensus 210 ~--~~~~~~---~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 210 P--NDVRVV---AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp T--TCCEEE---EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred C--CeEEEe---ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 4 222211 12223467889999999887665 468899999863 433 2233 2345677899999 5988776
Q ss_pred ecCC
Q psy17188 499 GGLD 502 (504)
Q Consensus 499 ~s~D 502 (504)
+..+
T Consensus 284 ~~~~ 287 (355)
T 3sre_A 284 CHPN 287 (355)
T ss_dssp EESC
T ss_pred ecCC
Confidence 6543
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.94 E-value=0.0058 Score=55.57 Aligned_cols=245 Identities=12% Similarity=0.131 Sum_probs=122.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEEEccC---CCEEEEEc-C-------C
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISAD---GTKLWTGG-L-------D 266 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~---~~~l~s~~-~-------d 266 (504)
....|+|.|+++.|+++...|.|++++. +++....+. ........++++|+ +..|+... . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3678999999983445567899999985 343321111 12346789999995 44454432 2 2
Q ss_pred CeEEEEECCCC--ceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEe
Q psy17188 267 NTVRSWDLREG--CVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWD 330 (504)
Q Consensus 267 g~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d 330 (504)
..|..+++..+ .+...+.. +..+.. .........++|.|+|.+.++.+. .|.|..++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i-------~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTV-------FRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEE-------EECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred eEEEEEEECCCCCCCCceEEE-------EEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 35666666533 11100000 000000 011122467999999965555433 24577776
Q ss_pred CCCCCcc----------ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-----------------
Q psy17188 331 LASPTPR----------IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK----------------- 383 (504)
Q Consensus 331 ~~~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----------------- 383 (504)
....-+. ..............++|.|+...+++.-.+.++.=.|.-+..+...
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 6532000 0111111223577899999433323332222222223222221110
Q ss_pred --------CcccccccccCCCceEEEEEcC-------CCCEEEEeeCCCcEEEeeCCCCCcceeecc-cCCCCceeEEEE
Q psy17188 384 --------TPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAI 447 (504)
Q Consensus 384 --------~~~~~~~~~~~~~~i~~~~~s~-------~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~ 447 (504)
..........+......++|.. +|+++++.-..+.|...+++.++......+ ......+..+++
T Consensus 251 ~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp TCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred cccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 0000000111223466778764 466777666677788887765432222111 122346888999
Q ss_pred CCCCCEEEEe
Q psy17188 448 SPDSKVCFSC 457 (504)
Q Consensus 448 s~~~~~l~s~ 457 (504)
.|||.++++.
T Consensus 331 ~pdG~lyv~t 340 (353)
T 2g8s_A 331 GPDGYLYVLT 340 (353)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999866654
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.85 E-value=0.0053 Score=54.50 Aligned_cols=152 Identities=15% Similarity=0.184 Sum_probs=82.3
Q ss_pred CCCEEEEecCC-----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEE
Q psy17188 170 DGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVR 239 (504)
Q Consensus 170 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~ 239 (504)
+++.++.|+.+ ..+.+||..+.+......+......-..+.+ ++++++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 67777777654 3588999887664433333222222222233 566777777553 47889988775433
Q ss_pred e--ecCCCCCeEEEEEccCCCEEEEEcCC-------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188 240 Q--FQGHTDGASCIDISADGTKLWTGGLD-------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310 (504)
Q Consensus 240 ~--~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 310 (504)
. +.........+. -+++.++.|+.+ ..+.+||+.+.+..... . .. ........+.+
T Consensus 139 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~~ 203 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA---E--------MS--TRRSGAGVGVL 203 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE
T ss_pred cCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC---C--------Cc--cccccccEEEE
Confidence 2 221111112222 256666766643 35889999888654321 0 00 00011122222
Q ss_pred cCCCCEEEEEeCC-----CcEEEEeCCCCCcccee
Q psy17188 311 LPDGRTLIVGGEA-----SNLSIWDLASPTPRIKA 340 (504)
Q Consensus 311 ~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~ 340 (504)
+++.++.|+.+ ..+.+||..+.+.....
T Consensus 204 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 204 --NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp --TTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred --CCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 56677777654 36899999887654443
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.84 E-value=0.013 Score=51.19 Aligned_cols=231 Identities=9% Similarity=0.114 Sum_probs=132.5
Q ss_pred CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188 225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304 (504)
Q Consensus 225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (504)
..|.|.|+.++..+.+..- ..-+.-.+|..+.||.-. ..++.++|+++.+ .+........
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~----------------klks~~~~e~ 108 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKS----------------KMKAHTMTDD 108 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTE----------------EEEEEECSSC
T ss_pred CEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhh----------------hhcceecCCc
Confidence 4788899988654432221 112334588777776655 6789999999886 3444444556
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc----CCCceeeEEECCCCCCceeeecc-----CCCeEEEE
Q psy17188 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----SAPACYALAISPDSKSPFFSSHH-----YKSCVKVW 375 (504)
Q Consensus 305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~-----~~~~i~i~ 375 (504)
|.-=.|-.+.. |+..+ +..++-|++.... .+...+.. ....|.....+++.++.+++.-+ -.|.+++|
T Consensus 109 VvfWkWis~~~-L~lVT-~taVyHWs~~~~s-~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 185 (365)
T 2xzh_A 109 VTFWKWISLNT-VALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 185 (365)
T ss_dssp EEEEEECSSSE-EEEEE-SSEEEEEESSTTC-CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEecCCCe-EEEEc-CCcEEEEcccCCC-CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEE
Confidence 66667765554 44333 3579999987532 22222222 24577778888888874433221 24778899
Q ss_pred ecCCCCCCCcccccccccCCCceEEEEEcCCC-----CEEEEeeC---CCcEEEeeCCCC---Ccce---ee--ccc--C
Q psy17188 376 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-----RTLIVGGE---ASNLSIWDLASP---TPRI---KA--ELT--S 437 (504)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-----~~l~~~~~---dg~i~iwd~~~~---~~~~---~~--~~~--~ 437 (504)
..+.... . ...+|..... .+-.+| .+++.+.. .+.++|.++... .+.. .. .++ .
T Consensus 186 S~er~~s----Q--~ieGhaa~F~--~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 186 SVDRKVS----Q--PIEGHAASFA--QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp ETTTTEE----E--EECCSEEEEE--EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred eeccccc----c--eeeeeeeeeE--EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 8765311 1 1112211111 111121 23333322 257899988543 1111 00 111 1
Q ss_pred CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEE
Q psy17188 438 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 486 (504)
Q Consensus 438 ~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 486 (504)
...--.++..++.-..+..-+.-|.|++||++++.++..-+--.+.|..
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 2333457788888888889999999999999999988765544444443
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.84 E-value=0.0058 Score=54.46 Aligned_cols=193 Identities=14% Similarity=0.101 Sum_probs=99.7
Q ss_pred CCcEEEEec-----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----C-----CcEEEEeCC
Q psy17188 124 PTKYVYTGG-----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A-----SNLSIWDLA 189 (504)
Q Consensus 124 ~~~~l~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~iw~~~ 189 (504)
++++++.|+ -..+.+||..+..- ..+........-.+++. -+++.++.|+. + ..+.+||+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W----~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW----LRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE----EECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE----eECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 456666665 24688888766421 11111111111112222 26677777765 2 468899988
Q ss_pred CCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEE
Q psy17188 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWT 262 (504)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s 262 (504)
+.+......+.........+.+ ++++++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++++++.
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE
Confidence 7664433333222222222333 66677776643 4688999988754332 2211111222222 5667777
Q ss_pred EcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCC
Q psy17188 263 GGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLA 332 (504)
Q Consensus 263 ~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~ 332 (504)
|+.+ ..+.+||+.+.+.... .. .. ........+.+ +++.++.|+.+ ..+.+||+.
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~---~~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMI---TA--------MN--TIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEC---CC--------CS--SCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeC---CC--------CC--CccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCC
Confidence 7654 4588899888764322 11 00 00111122222 56677777654 468999998
Q ss_pred CCCcccee
Q psy17188 333 SPTPRIKA 340 (504)
Q Consensus 333 ~~~~~~~~ 340 (504)
+.+.....
T Consensus 240 ~~~W~~~~ 247 (308)
T 1zgk_A 240 TETWTFVA 247 (308)
T ss_dssp TTEEEECC
T ss_pred CCcEEECC
Confidence 87654443
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.83 E-value=0.016 Score=52.19 Aligned_cols=195 Identities=13% Similarity=0.165 Sum_probs=111.9
Q ss_pred EEEEcCCCcEEEEe-------------cCCeEEEEeCCCCCCCCceeeeeecC-----CCCceEEEEEcc--CCC-EEEE
Q psy17188 118 AVTISNPTKYVYTG-------------GKGCVKVWDISQPGSKTPVSQLDCLQ-----RDNYIRSVKLLP--DGR-TLIV 176 (504)
Q Consensus 118 ~v~~s~~~~~l~~~-------------~d~~i~vw~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~--~~~-~l~~ 176 (504)
.+++.|+|..++++ .+|.|.++|.++.... ...+...+ ..-....+.+.+ +++ +|++
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--VSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC--EEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--eEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34456777666665 4889999998753222 12222222 234567777766 454 4544
Q ss_pred ec---CCCcEEEEeCCCCCcc--ceeeeecC-cCceEEEEECCCCCEEEEEeC-----------------CCcEEEEECC
Q psy17188 177 GG---EASNLSIWDLASPTPR--IKAELTSS-APACYALAISPDSKVCFSCCS-----------------DGNIAVWDLH 233 (504)
Q Consensus 177 ~~---~dg~i~iw~~~~~~~~--~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~iwd~~ 233 (504)
+. .+.+|.+|+++..... ....+.+. -...+.+.+.++|.+.++... .|.|..+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 42 2567888887654322 22222221 234788999999987776541 234555554
Q ss_pred CCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188 234 NQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311 (504)
Q Consensus 234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 311 (504)
++.. .+...-...+.++|+||++.|+.+ +..+.|..|++.. +++.. ............+++.
T Consensus 211 -~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~--------------~~~~~~~g~PDGi~vD 274 (355)
T 3sre_A 211 -NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP--------------LRVLSFDTLVDNISVD 274 (355)
T ss_dssp -TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE--------------EEEEECSSEEEEEEEC
T ss_pred -CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec--------------CEEEeCCCCCceEEEe
Confidence 3322 222233457899999999877655 4568899999863 33321 1111224567889999
Q ss_pred C-CCCEEEEEeCC-CcEEEEeC
Q psy17188 312 P-DGRTLIVGGEA-SNLSIWDL 331 (504)
Q Consensus 312 ~-~~~~l~~~~~d-g~i~v~d~ 331 (504)
+ +|++.+++..+ +.|..|+.
T Consensus 275 ~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 275 PVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp TTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCCcEEEEecCCceEEEEECC
Confidence 9 59877766544 34444443
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.80 E-value=0.0055 Score=54.82 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=56.4
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----C-------CcEEEEECCCCeEEEe-
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----D-------GNIAVWDLHNQTLVRQ- 240 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-------g~i~iwd~~~~~~~~~- 240 (504)
+++.|+ ..+.+||..+.+... ..+..............++.+++.|+. + ..+.+||..+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344555 579999998876542 233222222333334457777777773 1 1278889888764332
Q ss_pred -ecCCCCCeEEEEEccCCCEEEEEcCC--------CeEEEEECCCCceE
Q psy17188 241 -FQGHTDGASCIDISADGTKLWTGGLD--------NTVRSWDLREGCVK 280 (504)
Q Consensus 241 -~~~h~~~v~~~~~~~~~~~l~s~~~d--------g~i~~wd~~~~~~~ 280 (504)
+....... +++.. +++.++.|+.+ ..+.+||+.+++..
T Consensus 84 ~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 130 (315)
T 4asc_A 84 PLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG 130 (315)
T ss_dssp CBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEE
T ss_pred CCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEe
Confidence 11111111 12222 56666777642 45888999887643
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.79 E-value=0.0094 Score=54.20 Aligned_cols=253 Identities=10% Similarity=0.137 Sum_probs=127.6
Q ss_pred cEEEEEEcCCCc-EEEEecCCeEEEEeCCCCCCCCceeeee--ecCCCCceEEEEEccC---CCEEEEec-C-------C
Q psy17188 115 VVCAVTISNPTK-YVYTGGKGCVKVWDISQPGSKTPVSQLD--CLQRDNYIRSVKLLPD---GRTLIVGG-E-------A 180 (504)
Q Consensus 115 ~V~~v~~s~~~~-~l~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~~~~-~-------d 180 (504)
.-..|+|.|+|+ ++++...|.|++++.+. .....+..+. ..........++|+|+ +.+|.... . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 457899999999 88877789999998532 1111111111 1123456789999996 55555442 2 2
Q ss_pred CcEEEEeCCCCCcc---ceee---ee---cCcCceEEEEECCCCCEEEEEeC-------------CCcEEEEECCCCe--
Q psy17188 181 SNLSIWDLASPTPR---IKAE---LT---SSAPACYALAISPDSKVCFSCCS-------------DGNIAVWDLHNQT-- 236 (504)
Q Consensus 181 g~i~iw~~~~~~~~---~~~~---~~---~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iwd~~~~~-- 236 (504)
..|..|++...... .... +. .....-..|+|.|||.+.++.+. .|.|.-++.+..-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666766543111 0111 11 11112357999999965555433 2456666654320
Q ss_pred ----------EEEee-cCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCceEEEeecCCC---------------
Q psy17188 237 ----------LVRQF-QGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCVKVWDISQPG--------------- 288 (504)
Q Consensus 237 ----------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~~~~~~~~--------------- 288 (504)
....+ .++ .....++|.|+...|.++... +.=.+.-+..+...-|......
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 11111 123 346789999943344444322 1123333333322111110000
Q ss_pred CCCCcccceecccCCceEEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCCccceeee-ccCCCceeeEEECCCCCC
Q psy17188 289 SKTPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKS 360 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 360 (504)
............+...+..+.|.. +|+++++....+.|...++...+......+ ......+..+++.||+.
T Consensus 257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~- 335 (353)
T 2g8s_A 257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY- 335 (353)
T ss_dssp CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC-
T ss_pred CCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc-
Confidence 000001111112334567788864 467777766777888888765422111112 22234788999999997
Q ss_pred ceeee-ccCCCe
Q psy17188 361 PFFSS-HHYKSC 371 (504)
Q Consensus 361 ~~~~~-~~~~~~ 371 (504)
++++ -..++.
T Consensus 336 -lyv~td~~~g~ 346 (353)
T 2g8s_A 336 -LYVLTDESSGE 346 (353)
T ss_dssp -EEEEECSTTEE
T ss_pred -EEEEEeCCCCE
Confidence 4443 333443
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.66 E-value=0.03 Score=50.22 Aligned_cols=242 Identities=11% Similarity=0.074 Sum_probs=125.4
Q ss_pred CcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeee--ecCCCCceEEEEEccC---CCEEEEe---cCCCcEE
Q psy17188 114 EVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD--CLQRDNYIRSVKLLPD---GRTLIVG---GEASNLS 184 (504)
Q Consensus 114 ~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~~~---~~dg~i~ 184 (504)
..-..|+|.|+|+++++-. .|.|++++.+.+. ...+..+. ..........|+|+|+ +.+|... ..++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~-~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR-KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCc-EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 4457999999999999988 8999999865432 12222111 1134567899999995 4445442 2345666
Q ss_pred EEeCCCCC--------cccee-eee-cCcCceEEEEECCCCCEEEEEeC-------------CCcEEEEECCCC------
Q psy17188 185 IWDLASPT--------PRIKA-ELT-SSAPACYALAISPDSKVCFSCCS-------------DGNIAVWDLHNQ------ 235 (504)
Q Consensus 185 iw~~~~~~--------~~~~~-~~~-~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iwd~~~~------ 235 (504)
-|.+.... .+.+. .+. .....-..|.|.|||.+.++.+. .|.|.-.+.+..
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 67665421 11111 121 11122457999999987776542 345555554321
Q ss_pred ---eEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCC--CCCcc-cceecccCCceEEE
Q psy17188 236 ---TLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGS--KTPVS-QLDCLQRDNYIRSV 308 (504)
Q Consensus 236 ---~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~v~~~ 308 (504)
..+.. .+|.+ ...++|+|++.+.++= +.|+.=.+--+..+...-|....... ..... ......+......+
T Consensus 191 f~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 191 FPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp STTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 11111 24443 4678999987654442 22332222223333322111110000 00000 11111122355677
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCC
Q psy17188 309 KLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSK 359 (504)
Q Consensus 309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 359 (504)
+|. +|..++.....+.|....+..... .....+......+..++..||+.
T Consensus 269 ~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ 320 (347)
T 3das_A 269 AYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDK 320 (347)
T ss_dssp EEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTE
T ss_pred EEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCc
Confidence 776 456666666666777776654321 11222333446788888888886
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.62 E-value=0.016 Score=51.71 Aligned_cols=190 Identities=10% Similarity=0.064 Sum_probs=97.1
Q ss_pred EEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-----C------CcEEEEeCCCCCccce
Q psy17188 128 VYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----A------SNLSIWDLASPTPRIK 196 (504)
Q Consensus 128 l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d------g~i~iw~~~~~~~~~~ 196 (504)
++.|+ ..+.+||..+..-. ...+. .............+++.++.|+. . ..+.+||..+.+....
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~--~~~~~--~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECY--CASLS--SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEET-TEEEEEETTTTEEE--EEECC--CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEcC-CceEEECCCCCeEe--cCCCC--CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 33444 67888998774311 11111 11122223333457788888873 1 1277888887654333
Q ss_pred eeeecCcCceEEEEECCCCCEEEEEeCC--------CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcC-
Q psy17188 197 AELTSSAPACYALAISPDSKVCFSCCSD--------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGL- 265 (504)
Q Consensus 197 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~- 265 (504)
..+......-..+.+ ++++++.|+.+ ..+.+||..+.+-... +.........+ . -+++.++.|+.
T Consensus 83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL-S-HMDLVYVIGGKG 158 (315)
T ss_dssp CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-E-ETTEEEEECCBC
T ss_pred CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-E-ECCEEEEEeCCC
Confidence 222221111122222 56677777632 4589999988754332 21111111222 2 35667777775
Q ss_pred C-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCC
Q psy17188 266 D-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPT 335 (504)
Q Consensus 266 d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~ 335 (504)
+ ..+.+||+.+.+.... .+ .. ........+.+ +++.++.|+.++ .+.+||..+.+
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~---~~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKEL---AP--------MQ--TARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEEC---CC--------CS--SCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCeEEEC---CC--------CC--CchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 4688999988764321 11 00 00111112222 567777776554 48889998876
Q ss_pred ccceee
Q psy17188 336 PRIKAE 341 (504)
Q Consensus 336 ~~~~~~ 341 (504)
......
T Consensus 224 W~~~~~ 229 (315)
T 4asc_A 224 WAPFEA 229 (315)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 554433
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.59 E-value=0.015 Score=52.03 Aligned_cols=103 Identities=13% Similarity=0.081 Sum_probs=55.3
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----CC-------cEEEEECCCCeEEEe-
Q psy17188 173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----DG-------NIAVWDLHNQTLVRQ- 240 (504)
Q Consensus 173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~- 240 (504)
.++.|+. .+..||..+.+... ..+..............++.+++.|+. ++ .+.+||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4455543 48899988776533 222221222223334457777777773 12 177889887764332
Q ss_pred -ecCCCCCeEEEEEccCCCEEEEEcCC-------CeEEEEECCCCceE
Q psy17188 241 -FQGHTDGASCIDISADGTKLWTGGLD-------NTVRSWDLREGCVK 280 (504)
Q Consensus 241 -~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~ 280 (504)
+.........+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe
Confidence 1111111122222 56677777754 35788898887654
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.55 E-value=0.0038 Score=57.04 Aligned_cols=95 Identities=13% Similarity=0.141 Sum_probs=49.0
Q ss_pred CCCEEEEecC-CCcEEEEeCCC--CCccceeeee-cCcCceEEEEECCCCCEEEEEeC-C---------CcEEEEECCCC
Q psy17188 170 DGRTLIVGGE-ASNLSIWDLAS--PTPRIKAELT-SSAPACYALAISPDSKVCFSCCS-D---------GNIAVWDLHNQ 235 (504)
Q Consensus 170 ~~~~l~~~~~-dg~i~iw~~~~--~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~iwd~~~~ 235 (504)
+++.++.|+. ...+.+||+.. .+......+. .....-.++.+ ++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 6666677654 34688999864 3333222222 11111122222 5667777765 2 46899999887
Q ss_pred eEEEeecCC-CCCeEEEEEccCCCEEEEEcCC
Q psy17188 236 TLVRQFQGH-TDGASCIDISADGTKLWTGGLD 266 (504)
Q Consensus 236 ~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d 266 (504)
+-...-... .......+...++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 644322211 1111111122467777888765
No 330
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.48 E-value=0.048 Score=48.09 Aligned_cols=209 Identities=8% Similarity=0.071 Sum_probs=114.7
Q ss_pred CCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC--------------CcEEE
Q psy17188 123 NPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--------------SNLSI 185 (504)
Q Consensus 123 ~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------g~i~i 185 (504)
.++.+|.... ++.|...+.+... ...+.. . .+--+++++++|+..... ..|+.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~-------~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN-------D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE-------E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC-------C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 4566665543 5666666654421 222211 1 134568899999887543 35777
Q ss_pred EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC----SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW 261 (504)
Q Consensus 186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 261 (504)
.+++..+.. .+.... +..|+++++.|+-.. .+..|...+++... ...+..+.. ..++++++.|+
T Consensus 93 i~~dg~~~~---~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy 160 (302)
T 3s25_A 93 IKRNGHGST---VLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFY 160 (302)
T ss_dssp EETTSCCCE---EEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEE
T ss_pred EeCCCCcce---EeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEE
Confidence 777765432 222221 236777888888765 23456666665433 333433322 34567788777
Q ss_pred EEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCccc
Q psy17188 262 TGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASPTPRI 338 (504)
Q Consensus 262 s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~ 338 (504)
-.+. ...|.+.++..+..+.. .. ... ...++|++.+|+..... ..|..-++.......
T Consensus 161 ~t~~g~~~Iy~~~l~g~~~~~l----------------~~--~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~ 221 (302)
T 3s25_A 161 YNNPKNGQLYRYDTASQSEALF----------------YD--CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV 221 (302)
T ss_dssp EECTTTCCEEEEETTTTEEEEE----------------EC--SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE
T ss_pred EEeCCCceEEEEECCCCCEEEE----------------eC--CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE
Confidence 6654 57888888877653211 11 111 12356888888876544 356666666543222
Q ss_pred eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 339 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
. .. ..+ ..++|+++.+++.+......|..-++..
T Consensus 222 L---t~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 222 L---TE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp C---SC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred E---eC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2 11 122 3477888865544444456666666654
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.45 E-value=0.027 Score=51.25 Aligned_cols=148 Identities=9% Similarity=0.106 Sum_probs=97.6
Q ss_pred EcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC--CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc---
Q psy17188 121 ISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ--RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--- 195 (504)
Q Consensus 121 ~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--- 195 (504)
.+.+|.-++...++.||.-++... ...+.+.... .-..|..+..+|+|++||..+ +..|.|-.+..+....
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~---~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTD---SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTC---SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EEcCCCEEEEEECCEEEEEECCCC---CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence 345666777777788998888753 2344444322 223578899999999999986 4689998887332110
Q ss_pred -------eeeeec------CcCceEEEEECC---CCCEEEEEeCCCcEEEEECCCC--eEEEeec---------CCCCCe
Q psy17188 196 -------KAELTS------SAPACYALAISP---DSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQ---------GHTDGA 248 (504)
Q Consensus 196 -------~~~~~~------~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~---------~h~~~v 248 (504)
...+.- ...+|..+.|+| .+..|++-..|+.|++||+... ++. .++ .....|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 011111 246799999999 4558999999999999999852 111 222 233578
Q ss_pred EEEEEccCCCEEEEE--cCCCeEEEEE
Q psy17188 249 SCIDISADGTKLWTG--GLDNTVRSWD 273 (504)
Q Consensus 249 ~~~~~~~~~~~l~s~--~~dg~i~~wd 273 (504)
.+++|..++-.|... +..|.|+-.-
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 889998877656553 4777776543
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.42 E-value=0.029 Score=59.09 Aligned_cols=266 Identities=11% Similarity=0.212 Sum_probs=148.2
Q ss_pred CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188 179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT 258 (504)
Q Consensus 179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 258 (504)
...+|.|.|+..+........... +.-.+|..+.++.-. ..++.|+|+++.+.+..+.- ..+|.-=.|-.+.
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~- 117 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN- 117 (1630)
T ss_pred CCceEEEEECCCCCCcccccccch-----hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-
Confidence 344789999987654322222221 244678777776654 67899999999888887773 4567666776544
Q ss_pred EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee--cccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188 259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW 329 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~ 329 (504)
.|+-.+ +..|+-|++..... |...+.. .-....|..-..+++.++++..+ -.|.+.+|
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s~------------P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGESQ------------PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCCc------------cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 444333 46799999964221 1111111 11245677778888888877543 34789999
Q ss_pred eCCCCCccceeeeccCCCceeeEEECCCCCCc-eeeec---cCCCeEEEEecCCC-CCCCcc--c----ccccccCCCce
Q psy17188 330 DLASPTPRIKAELTSSAPACYALAISPDSKSP-FFSSH---HYKSCVKVWDISQP-GSKTPV--S----QLDCLQRDNYI 398 (504)
Q Consensus 330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~---~~~~~i~i~d~~~~-~~~~~~--~----~~~~~~~~~~i 398 (504)
..+.. ....+.+|...-..+....+.... +++.+ ...+.+.|-++... .....+ . .+.........
T Consensus 185 S~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp 261 (1630)
T 1xi4_A 185 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 261 (1630)
T ss_pred ecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcc
Confidence 88764 233344443333333222111110 22211 11367888888553 111111 0 01111123445
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
.++..++.-..+...+.-|.|++||+.++..+........ +|...+-.....-++.....|.|.--.+..
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~--~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCC--ceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 5788888888888999999999999999877665544332 232222222222233333555554444443
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.39 E-value=0.068 Score=47.68 Aligned_cols=191 Identities=15% Similarity=0.142 Sum_probs=95.5
Q ss_pred EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----CC-------cEEEEeCCCCCccc
Q psy17188 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----AS-------NLSIWDLASPTPRI 195 (504)
Q Consensus 127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~ 195 (504)
+++.|+ ..+..||..+..-.. .................++..++.|+. ++ .+.+||..+.+...
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~----~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYL----TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEE----EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhccc-cceEEECCCCCceec----ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 444444 347888887643111 111111111223334457788888873 11 17788887765443
Q ss_pred eeeeecCcCceEEEEECCCCCEEEEEeCC-------CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188 196 KAELTSSAPACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD 266 (504)
Q Consensus 196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d 266 (504)
...+.........+.+ ++++++.|+.+ ..+.+||+.+.+-... +......- +++. .++++++.|+.+
T Consensus 93 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~ 168 (318)
T 2woz_A 93 LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKT 168 (318)
T ss_dssp CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEE
T ss_pred CCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCC
Confidence 3333222222222223 56677777653 2488899887754432 21111111 1222 356666777642
Q ss_pred ------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCC
Q psy17188 267 ------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPT 335 (504)
Q Consensus 267 ------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~ 335 (504)
..+.+||+.+.+..... . .. ........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 169 ~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 169 DDKKCTNRVFIYNPKKGDWKDLA---P--------MK--TPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp SSSCBCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCccceEEEEcCCCCEEEECC---C--------CC--CCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 35899999988654321 0 00 00011112222 56677777543 347789998876
Q ss_pred ccceee
Q psy17188 336 PRIKAE 341 (504)
Q Consensus 336 ~~~~~~ 341 (504)
......
T Consensus 234 W~~~~~ 239 (318)
T 2woz_A 234 WEVMTE 239 (318)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 554433
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.37 E-value=0.025 Score=51.57 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=49.0
Q ss_pred CCcEEEEec--CCeEEEEeCCCC-CCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-C---------CcEEEEeCCC
Q psy17188 124 PTKYVYTGG--KGCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A---------SNLSIWDLAS 190 (504)
Q Consensus 124 ~~~~l~~~~--d~~i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~iw~~~~ 190 (504)
++++++.|+ ...+.++|..+. ..-..+..+.. .....-.++.+ ++++++.|+. + ..+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~-~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPG-GPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTT-CCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCC-CcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 577777776 567888988641 11111111110 01111122222 6777777765 2 4689999987
Q ss_pred CCccceeeee-cCcCceEEEEECCCCCEEEEEeCC
Q psy17188 191 PTPRIKAELT-SSAPACYALAISPDSKVCFSCCSD 224 (504)
Q Consensus 191 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d 224 (504)
.+......+. .......++. .++++++.|+.+
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 6654333332 1111122222 467777788754
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.31 E-value=0.078 Score=46.74 Aligned_cols=214 Identities=10% Similarity=0.134 Sum_probs=115.2
Q ss_pred EccCCCEEEEec--CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC--------------CcEEEE
Q psy17188 167 LLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--------------GNIAVW 230 (504)
Q Consensus 167 ~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------g~i~iw 230 (504)
|+.++.+|+... .++.|...+.+.... ..+... .+--+++++.+|+.+... ..|+..
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~---~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNI---HKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSC---EEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCC---EEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 345777777764 356677777654442 222222 123457788888877543 357777
Q ss_pred ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR 306 (504)
Q Consensus 231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 306 (504)
+++..+...... . . +..|+++++.|+-.. .+..|...++.....+ .+ ..+. +
T Consensus 94 ~~dg~~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~--------------~l--t~~~--~- 149 (302)
T 3s25_A 94 KRNGHGSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK--------------KI--KNHY--L- 149 (302)
T ss_dssp ETTSCCCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE--------------EE--ESSC--C-
T ss_pred eCCCCcceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE--------------EE--eCCC--c-
Confidence 777664332222 1 1 236777888887665 3345666666644321 11 1111 1
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188 307 SVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP 385 (504)
Q Consensus 307 ~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 385 (504)
.+++++++.|+..+. ...|.+.++........ ... .. ...+.|+++.+++........|..-++.......
T Consensus 150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l--~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~- 221 (302)
T 3s25_A 150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF--YDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV- 221 (302)
T ss_dssp -CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE--ECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE-
T ss_pred -eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE--eCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE-
Confidence 345678888887655 56788888776543222 221 22 2335688886555444333456555555432211
Q ss_pred ccccccccCCCceEEEEEcCCCCEEEEeeC--CCcEEEeeCCCCC
Q psy17188 386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPT 428 (504)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~--dg~i~iwd~~~~~ 428 (504)
+. ...+ ..|+|++++|+.+.. .+.|..-++....
T Consensus 222 Lt-------~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 222 LT-------EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp CS-------CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred Ee-------CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 11 1122 347888888876533 3556666666443
No 336
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.29 E-value=0.066 Score=48.76 Aligned_cols=154 Identities=10% Similarity=0.146 Sum_probs=95.5
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-
Q psy17188 309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP- 385 (504)
Q Consensus 309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~- 385 (504)
..+.+|..++++- ++.||.-++.....-.....+. .-..+..+..+|+|. +++.. .+..|.|..+..+.....
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~--lLAl~-g~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD--LLCLF-NDNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS--EEEEE-CSSEEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC--EEEEe-cCCeEEEEEecCccccCcc
Confidence 3455666666663 4678877877543222333332 233678899999998 44444 466888888874321111
Q ss_pred ------cc--ccccc----cCCCceEEEEEcCC---CCEEEEeeCCCcEEEeeCCCCCccee--------ecccCCCCce
Q psy17188 386 ------VS--QLDCL----QRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIK--------AELTSSAPAC 442 (504)
Q Consensus 386 ------~~--~~~~~----~~~~~i~~~~~s~~---g~~l~~~~~dg~i~iwd~~~~~~~~~--------~~~~~~~~~v 442 (504)
+. ..... .....|..+.|+|- +..|++-..|+.|++||+........ +........|
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 00 11111 13567999999994 56899999999999999986322211 1122233668
Q ss_pred eEEEECCCCCEEEEee--CCCcEEEE
Q psy17188 443 YALAISPDSKVCFSCC--SDGNIAVW 466 (504)
Q Consensus 443 ~~l~~s~~~~~l~s~~--~dg~i~iw 466 (504)
.+++|..++-.|...+ +.|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999999887666644 77877643
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.09 E-value=0.15 Score=45.71 Aligned_cols=249 Identities=8% Similarity=0.025 Sum_probs=127.9
Q ss_pred eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC---CCE
Q psy17188 240 QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRT 316 (504)
Q Consensus 240 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~ 316 (504)
.+...-.....|+|.|||+++++--..|.|++++...++........ . ...........++++|+ +..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~--------~-v~~~g~~GllGia~~Pdf~~~g~ 96 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP--------G-VSPSGEGGLLGIALSPDYASDHM 96 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT--------T-CCCBTTBSEEEEEECTTHHHHCE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC--------c-eeecCCCCceeeEeccccccCCE
Confidence 34434556789999999987776655899999987766543211000 0 11223456789999995 445
Q ss_pred EEEE---eCCCcEEEEeCCCCC--------ccce-eeec-cCCCceeeEEECCCCCCceeeecc------------CCCe
Q psy17188 317 LIVG---GEASNLSIWDLASPT--------PRIK-AELT-SSAPACYALAISPDSKSPFFSSHH------------YKSC 371 (504)
Q Consensus 317 l~~~---~~dg~i~v~d~~~~~--------~~~~-~~~~-~~~~~i~~~~~~~~~~~~~~~~~~------------~~~~ 371 (504)
|++. ..++.|.-|...... ...+ ..+. ........+.|.||+. +++.++. ..+.
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTC
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCE
Confidence 5543 234566667665421 1111 1121 1222456799999986 2444332 1244
Q ss_pred EEEEecCCCC-CCCcc--cccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCc----------------ce
Q psy17188 372 VKVWDISQPG-SKTPV--SQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP----------------RI 431 (504)
Q Consensus 372 i~i~d~~~~~-~~~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~----------------~~ 431 (504)
|.-.+..... ...++ ...-...+. ....++|+|+|.+.++=. .++.=.|-.+..+.. ..
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P 254 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDP 254 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCC
T ss_pred EEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCC
Confidence 4444443210 00000 011111222 244899999887655432 222222222222110 00
Q ss_pred eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce----EEEEeecCCceEEEEEccCCCEEEEec
Q psy17188 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~s~d~~~l~s~s 500 (504)
......+......++|. ++..++..-..+.|....++.... ...+.+....+.+|+..|||.++++-+
T Consensus 255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 255 VAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp SEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 11111121245567776 455666555666777777765432 222333346799999999997766543
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0059 Score=54.48 Aligned_cols=116 Identities=9% Similarity=0.050 Sum_probs=70.4
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEeecCC-CCCeEEEEEc--c-CCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCC
Q psy17188 216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDIS--A-DGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSK 290 (504)
Q Consensus 216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~--~-~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~ 290 (504)
..++.++.||.|.-+|.++|+.+.+++.. ..++....-. + ++..++.. +.||.|..++..+|.. .|....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~~~-- 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSIRQ-- 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEHHH--
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeecccc--
Confidence 37888999999999999999999998753 1222221100 1 22333333 6899999999988843 34332110
Q ss_pred CCcccceecccCCceEE---EEE-----cCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188 291 TPVSQLDCLQRDNYIRS---VKL-----LPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342 (504)
Q Consensus 291 ~~~~~~~~~~~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 342 (504)
.-...++.. ... ...+..+++++.+|.+...|+++++.......
T Consensus 88 --------lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 --------LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp --------HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred --------ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 001111111 000 01355788999999999999999865554443
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.06 E-value=0.05 Score=44.61 Aligned_cols=156 Identities=10% Similarity=0.013 Sum_probs=81.9
Q ss_pred CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc
Q psy17188 246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 325 (504)
Q Consensus 246 ~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 325 (504)
..+..++|+|+|.+.+. .+|.+.-.+..+.+...|--.. ..+-...- ....++.|.|+|.+.++ .||.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~-------t~IG~~Gw-~~F~a~~fD~~G~LYav--~dG~ 108 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA-------KKIGNGGW-NQFQFLFFDPNGYLYAV--SKDK 108 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC-------EEEECSCG-GGCSEEEECTTSCEEEE--ETTE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc-------cEeccccc-ccceEEEECCCCCEEEe--CCCE
Confidence 36779999998875555 6787777776553321110000 00000011 11478999999997777 5598
Q ss_pred EEEEeCCCCCcc-cee---e-eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc--cCCCce
Q psy17188 326 LSIWDLASPTPR-IKA---E-LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--QRDNYI 398 (504)
Q Consensus 326 i~v~d~~~~~~~-~~~---~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--~~~~~i 398 (504)
|+-++-.+.... ... . -...-..+..+.+.|++. +++.. ++.+.-..........-+...... ..-...
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~y 184 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTF 184 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred EEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce--EEEEe--CCcEEecCCCCCCCcccccccceeccCCcceE
Confidence 888875332211 100 1 111124678999999997 55555 666433222211111111000000 112234
Q ss_pred EEEEEcCCCCEEEEeeCCCcE
Q psy17188 399 RSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i 419 (504)
..+.|.+++.+.++. ++.+
T Consensus 185 r~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 185 KFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEEECTTSCEEEEE--TTEE
T ss_pred EEEEECCCCcEEEEe--CCeE
Confidence 457789998877766 6643
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.00 E-value=0.02 Score=46.89 Aligned_cols=147 Identities=9% Similarity=-0.016 Sum_probs=83.9
Q ss_pred CCcceEEEECCCCCcccCCCCCCcccCCCCCccccc-----eeee---cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCC
Q psy17188 71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQ-----INTL---SHGEVVCAVTISNPTKYVYTGGKGCVKVWDIS 142 (504)
Q Consensus 71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~ 142 (504)
-.++..++++|+|.+.++ .++.++....+....+ -..+ +.+. -.++.|.|+|.+.++ +||.|.-++-.
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP 115 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPP 115 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCC
T ss_pred cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCC
Confidence 356779999999998888 5555655443321111 1222 2222 578999999999998 77999888754
Q ss_pred CCCCCCceeeeeec--CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc----ceeeee-cCcCceEEEEECCCC
Q psy17188 143 QPGSKTPVSQLDCL--QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR----IKAELT-SSAPACYALAISPDS 215 (504)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~-~~~~~v~~~~~s~~~ 215 (504)
+.+...-+..-... ..=..+..|.|.|+|.+.++. |+.++-+........ ....+. ..-..-.-+.|.+++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 43322222111110 112468999999999977776 677543332211100 011111 222234456688888
Q ss_pred CEEEEEeCCC
Q psy17188 216 KVCFSCCSDG 225 (504)
Q Consensus 216 ~~l~~~~~dg 225 (504)
.+.++. ++
T Consensus 194 ~l~~v~--~g 201 (236)
T 1tl2_A 194 TLFGVQ--GG 201 (236)
T ss_dssp CEEEEE--TT
T ss_pred cEEEEe--CC
Confidence 766655 55
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.93 E-value=0.039 Score=55.25 Aligned_cols=234 Identities=14% Similarity=0.169 Sum_probs=113.6
Q ss_pred cCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCC------
Q psy17188 255 ADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA------ 323 (504)
Q Consensus 255 ~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------ 323 (504)
.++..++.|+.+ ..+.+||+.+++........+... ......-.+++..+ +++.++.|+.+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~--------~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSE--------VPVARMCHTFTTISRNNQLLLIGGRKAPHQGL 467 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSC--------CCCCCBSCEEEEETTTTEEEEECCBSSTTCBC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCC--------CCccccceEEEEEccCCEEEEEcCCCCCCCcc
Confidence 456677777754 468888888877543321100000 00011112333333 67777777643
Q ss_pred CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 401 (504)
Q Consensus 324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~ 401 (504)
..+.+||..+.++.....+...... .+.+...++. +++.|+.++ .+.+||..+..-......-........-..+
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~--iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~ 544 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGN--VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGL 544 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSC--EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEE
T ss_pred ccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCE--EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEE
Confidence 3578899888755444333322211 2223323444 666665543 6888888764211100000000111112245
Q ss_pred EEcCC-CCEEEEeeC--C-----CcEEEeeCCCCC------cceeeccc-CCCCceeEEEECCCCCEEEEeeC-------
Q psy17188 402 KLLPD-GRTLIVGGE--A-----SNLSIWDLASPT------PRIKAELT-SSAPACYALAISPDSKVCFSCCS------- 459 (504)
Q Consensus 402 ~~s~~-g~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~~------- 459 (504)
.+..+ ++.++.|+. + ..+.+||+.+.. ........ ...... +++...++++++.|+.
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCC
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCC
Confidence 55555 667777765 2 358899998776 12111111 111111 2233333777777774
Q ss_pred -CCcEEEEEcCCcceEEEEeecCC------c--e-EEEEEccCCCEEEEecC
Q psy17188 460 -DGNIAVWDLHNQTLVRQFQGHTD------G--A-SCIDISADGTKLWTGGL 501 (504)
Q Consensus 460 -dg~i~iwd~~~~~~~~~~~~h~~------~--v-~~~~~s~d~~~l~s~s~ 501 (504)
...+.+||+.+.+-. ....... + + .+.....+++.++.||.
T Consensus 624 ~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 624 RTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp TTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 345999999887543 1110000 0 0 23344456688888874
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.92 E-value=0.24 Score=45.30 Aligned_cols=204 Identities=7% Similarity=0.121 Sum_probs=125.7
Q ss_pred EEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188 120 TISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 199 (504)
Q Consensus 120 ~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 199 (504)
-.+|..++||-=...++.|+|+++. ..+.... ....|.-=.|-.+. .|+..+ +..|+-|++.... .....+
T Consensus 72 IMnP~~~iiALrag~~lQiFnle~K---~klks~~---~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s-~P~kvF 142 (494)
T 1bpo_A 72 IMNPASKVIALKAGKTLQIFNIEMK---SKMKAHT---MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMF 142 (494)
T ss_dssp EECSSSSCEEEEETTEEEEEETTTT---EEEEEEE---CSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSC-CCEEEE
T ss_pred eeCCCCcEEEEecCCeEEEEchHHh---hhhccee---cCCCceEEEecCCC-eEEEEc-CCeeEEecccCCC-Cchhhe
Confidence 3567777777666889999999874 3344333 23456666776544 455553 5689999997532 223333
Q ss_pred ecC----cCceEEEEECCCCCEEEEEeC-------CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC---CEEEEEcC
Q psy17188 200 TSS----APACYALAISPDSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG---TKLWTGGL 265 (504)
Q Consensus 200 ~~~----~~~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~ 265 (504)
..| ...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|......+....+. ..+..+..
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 322 345777777889997775442 467899997754 346678887665554443211 23444443
Q ss_pred C---CeEEEEECCCCceEEEeecCCCCCCCcc------cceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188 266 D---NTVRSWDLREGCVKVWDISQPGSKTPVS------QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP 336 (504)
Q Consensus 266 d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 336 (504)
. +.+.+.++.... ....++. .+......+...++..++.-..++.-+.-|.+++||++++..
T Consensus 222 ~~~g~kLhi~Ei~~~~---------~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPP---------TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp STTCCEEEEEECSCCC---------TTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCcEEEEEEcCCCc---------cCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 2 566666664320 0000110 111122356678899999888999999999999999999865
Q ss_pred cceeee
Q psy17188 337 RIKAEL 342 (504)
Q Consensus 337 ~~~~~~ 342 (504)
.....+
T Consensus 293 i~~nrI 298 (494)
T 1bpo_A 293 IYMNRI 298 (494)
T ss_dssp EEEEEC
T ss_pred eeeecc
Confidence 544443
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.87 E-value=0.1 Score=52.26 Aligned_cols=156 Identities=13% Similarity=0.198 Sum_probs=86.1
Q ss_pred cCCCEEEEecCC----CcEEEEeCCCCCcccee-e-----eecCcCceEEEEECCCCCEEEEEeCC------CcEEEEEC
Q psy17188 169 PDGRTLIVGGEA----SNLSIWDLASPTPRIKA-E-----LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDL 232 (504)
Q Consensus 169 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~-----~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~ 232 (504)
.++..++.|+.+ ..+.+||..+.+..... . .......-..+.+..++++++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467777777743 46889998877654332 1 11111112233332267777777653 35889999
Q ss_pred CCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188 233 HNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV 308 (504)
Q Consensus 233 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 308 (504)
.+.+-... +...... .+++...+++.++.|+.++ .+.+||+.+.+.... ..... . ........++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~---~~~g~-----~--p~~r~~~~a~ 544 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV---TPKDE-----F--FQNSLVSAGL 544 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC---CCSSG-----G--GGSCCBSCEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc---cCCCC-----C--CCcccceeEE
Confidence 88654332 2211111 2233324788888887655 689999998764322 11000 0 0111112335
Q ss_pred EEcCC-CCEEEEEeC--C-----CcEEEEeCCCCC
Q psy17188 309 KLLPD-GRTLIVGGE--A-----SNLSIWDLASPT 335 (504)
Q Consensus 309 ~~~~~-~~~l~~~~~--d-----g~i~v~d~~~~~ 335 (504)
.+..+ ++.++.|+. + ..+.+||+.+..
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 55555 666777765 2 358899998876
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.75 E-value=0.39 Score=45.35 Aligned_cols=256 Identities=14% Similarity=0.153 Sum_probs=141.6
Q ss_pred CCCEEEEec-CCCcEEEEeCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeC-------CCcE------------
Q psy17188 170 DGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCS-------DGNI------------ 227 (504)
Q Consensus 170 ~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~-------dg~i------------ 227 (504)
||++|+.-. .+..|...+++..+...+..++ ....+..++|- |+..+++.+++ ||..
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCC-CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence 788888875 4566888888876655444443 44557888886 67778888775 3331
Q ss_pred EEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---------------eEEEEECC-------CCc-------
Q psy17188 228 AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---------------TVRSWDLR-------EGC------- 278 (504)
Q Consensus 228 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---------------~i~~wd~~-------~~~------- 278 (504)
...|..+.+...++. -.+....+...+++++.++.+.+. .+.++++. .|+
T Consensus 220 ~~iD~~tm~v~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~ 298 (638)
T 3sbq_A 220 NAIDAETMEMAFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDS 298 (638)
T ss_dssp EEEETTTCSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred EEEcCCccEEEEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCC
Confidence 112222222222221 122333445566777777665432 35555543 122
Q ss_pred -eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCc-----------cceeeeccC
Q psy17188 279 -VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTP-----------RIKAELTSS 345 (504)
Q Consensus 279 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~-----------~~~~~~~~~ 345 (504)
+.+.+....... ................+..+|||+++++++. +.++.++|++.... ....+.+ -
T Consensus 299 gv~ViD~~~~~~~-~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~ 376 (638)
T 3sbq_A 299 KTPVLDGRKKDGK-DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-L 376 (638)
T ss_dssp CCCEEECSCBTTB-CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-C
T ss_pred CeeEEcccccccc-CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-C
Confidence 222222110000 0012222233455678899999999888764 67899999874211 1111222 2
Q ss_pred CCceeeEEECCCCCCceeeeccCCCeEEEEecCCC------CCCCcccccccccCCCceEEEEE------cCCCCEEEEe
Q psy17188 346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQP------GSKTPVSQLDCLQRDNYIRSVKL------LPDGRTLIVG 413 (504)
Q Consensus 346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~~~~~~i~~~~~------s~~g~~l~~~ 413 (504)
.-.....+|.++|. .+.+-.-|..|..|++... .....+ +....-...+-.+.- .|||++|++.
T Consensus 377 GlGPlHt~Fd~~G~--aYTtlfidSqvvkWni~~a~~~~~g~~~~~v--~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 377 GLGPLHTTFDGRGN--AYTTLFIDSQVVKWNMEEAVRAYKGEKVNYI--KQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp CSCEEEEEECSSSE--EEEEETTTTEEEEEEHHHHHHHHTTCCCCCE--EEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred CCcccEEEECCCCc--eEeeeeecceEEEEeccHHHHHhcCccCCee--eeccccccCCcccccCCCccCCCCccEEEEe
Confidence 34567888999884 7888889999999998642 111111 111111222333333 5789999987
Q ss_pred eC---CCc----------EEEeeCCCCCcceee
Q psy17188 414 GE---ASN----------LSIWDLASPTPRIKA 433 (504)
Q Consensus 414 ~~---dg~----------i~iwd~~~~~~~~~~ 433 (504)
+. |.. -.++|+...+...+.
T Consensus 453 nK~skdrfl~vGpl~pen~QlidIsGdkM~lv~ 485 (638)
T 3sbq_A 453 SKFSKDRFLPVGPLHPENDQLIDISGDEMKLVH 485 (638)
T ss_dssp ESCCTTSSCCCSSSCCEEEEEEECSSSSCEEEE
T ss_pred cccccccCcCCCCCCCCcceeEecCCCceEEEe
Confidence 54 332 477888765544443
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.72 E-value=0.41 Score=45.22 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=67.3
Q ss_pred eEEEEEcCCCCEEEEeeC-CCcEEEeeCCCC------C-----cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188 398 IRSVKLLPDGRTLIVGGE-ASNLSIWDLASP------T-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 465 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~------~-----~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i 465 (504)
...+.++|||+++++++. +.++.++|++.- + .....+.. -.......+|.++|.-..+---|..|..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 447889999999887664 678999998731 1 11111222 2233567899999965556668999999
Q ss_pred EEcCCc----------ceEEEEeecCCceEEEEE------ccCCCEEEEec
Q psy17188 466 WDLHNQ----------TLVRQFQGHTDGASCIDI------SADGTKLWTGG 500 (504)
Q Consensus 466 wd~~~~----------~~~~~~~~h~~~v~~~~~------s~d~~~l~s~s 500 (504)
|++... ..+.++.-|-. +-.+.- .+||++|++..
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 998653 45666665543 233322 67999999864
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.46 E-value=0.34 Score=51.38 Aligned_cols=224 Identities=9% Similarity=0.132 Sum_probs=123.7
Q ss_pred CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303 (504)
Q Consensus 224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (504)
...|.|.|+.++..+.+.. -..-+.-.+|..+.|+.-. ..++.++|+++.+ .+.......
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~----------------klks~~~~e 106 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKS----------------KMKAHTMTD 106 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhh----------------hhcccccCC
Confidence 3478899998876542221 1122334677776666554 6799999998765 333344445
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc----CCCceeeEEECCCCCCceeeec-----cCCCeEEE
Q psy17188 304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----SAPACYALAISPDSKSPFFSSH-----HYKSCVKV 374 (504)
Q Consensus 304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~-----~~~~~i~i 374 (504)
.|.-=.|-.+... +.. .+..|+-|++.... .+...+.. ....|..-..+++.++.+++.- .-.|.+.+
T Consensus 107 ~VvfWkWis~~~l-~lV-T~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL 183 (1630)
T 1xi4_A 107 DVTFWKWISLNTV-ALV-TDNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (1630)
T ss_pred CceEEEecCCCee-EEE-cCCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence 5665666655443 333 23579999996422 22222222 2457778888888887443322 24578999
Q ss_pred EecCCCCCCCcccccccccCCCceEEEEEc--C-CCCEEEEeeC---CCcEEEeeCCCC---Cccee-----eccc--CC
Q psy17188 375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLL--P-DGRTLIVGGE---ASNLSIWDLASP---TPRIK-----AELT--SS 438 (504)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~-~g~~l~~~~~---dg~i~iwd~~~~---~~~~~-----~~~~--~~ 438 (504)
|..+....... .+|......+... + ....++.+.. .+.++|.++... .+... ..++ ..
T Consensus 184 yS~er~~sQ~i------egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~ 257 (1630)
T 1xi4_A 184 YSVDRKVSQPI------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 257 (1630)
T ss_pred eecccccchhh------hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccc
Confidence 98875432111 0111111111111 1 1122222211 267888888543 11110 0111 11
Q ss_pred CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188 439 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 476 (504)
Q Consensus 439 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 476 (504)
..-..++..++.-..+..-+.-|.|++||+.++.++..
T Consensus 258 ~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred cCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 22234667788778888889999999999999987643
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.46 E-value=0.6 Score=43.86 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=61.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEeecC------CCCCeEEEEEccC---CCEEEEEcC-------
Q psy17188 204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQG------HTDGASCIDISAD---GTKLWTGGL------- 265 (504)
Q Consensus 204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~------h~~~v~~~~~~~~---~~~l~s~~~------- 265 (504)
.....|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3467999999998776654434788888655543 222321 2456789999995 445544432
Q ss_pred ------CCeEEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188 266 ------DNTVRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 321 (504)
Q Consensus 266 ------dg~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 321 (504)
...|..++...+ .+..... .+..+. .........++|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~-------i~~~~p-~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVD-------LLAGLP-SSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEE-------EEEEEC-CCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEE-------EEEcCC-CCCCCCCCeEeECCCCeEEEEEC
Confidence 235555655432 1100000 000011 01123478999999998777654
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.42 Score=42.60 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=67.4
Q ss_pred CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE--CC-CCCEEEEE-eCCCcEEEEECCCCeEEEeecC----
Q psy17188 172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SP-DSKVCFSC-CSDGNIAVWDLHNQTLVRQFQG---- 243 (504)
Q Consensus 172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~---- 243 (504)
..+++++.||.|.-+|.++++........ ...++....- .+ ++..++.. +.||.|..++..+|.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 46788889999999998887755444333 1112211110 01 23333333 5899999999988865544321
Q ss_pred CCCCeEE---EEE-c----cCCCEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188 244 HTDGASC---IDI-S----ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQ 286 (504)
Q Consensus 244 h~~~v~~---~~~-~----~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~ 286 (504)
...++.. ... . ..+..+++++.+|.+...|+++|+. +|....
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEec
Confidence 1222221 000 0 1345889999999999999999985 455543
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.49 E-value=1.7 Score=40.83 Aligned_cols=110 Identities=14% Similarity=0.123 Sum_probs=61.7
Q ss_pred cEEEEEEcCCCc--EEEEecCCeEEEEeCCCCCCCCceeeeee-c------CCCCceEEEEEccC----CCEEEEecC--
Q psy17188 115 VVCAVTISNPTK--YVYTGGKGCVKVWDISQPGSKTPVSQLDC-L------QRDNYIRSVKLLPD----GRTLIVGGE-- 179 (504)
Q Consensus 115 ~V~~v~~s~~~~--~l~~~~d~~i~vw~~~~~~~~~~~~~~~~-~------~~~~~v~~~~~s~~----~~~l~~~~~-- 179 (504)
.-..|+|.|++. ++++-..|.|++++.+......++..+.. . ........|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 347899999985 88887799999997543211222222210 0 12467889999996 333333221
Q ss_pred C----------CcEEEEeCCCC--------Cccceeeee--cCcCceEEEEECCCCCEEEEEeCC
Q psy17188 180 A----------SNLSIWDLASP--------TPRIKAELT--SSAPACYALAISPDSKVCFSCCSD 224 (504)
Q Consensus 180 d----------g~i~iw~~~~~--------~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d 224 (504)
+ ..|.-|.+... +.+.+..+. .....-..|+|.|||.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13545665432 111122222 122336789999999876665543
No 350
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.07 E-value=2 Score=39.35 Aligned_cols=306 Identities=8% Similarity=0.009 Sum_probs=132.3
Q ss_pred CEEEEecCCCcEEEEeCCC--CCccceeeeecCcCceEEEEECC-CCCEEEEEeCCC----cEEEEECCCCeEEEeec--
Q psy17188 172 RTLIVGGEASNLSIWDLAS--PTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDG----NIAVWDLHNQTLVRQFQ-- 242 (504)
Q Consensus 172 ~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~-- 242 (504)
..|.+|...| +.+++... ....... .......|.+|++.| +...|.++...| .|...+ +.++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~-~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRG-PVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEE-EESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECC-ccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 4566777666 55555433 1222111 112245699999998 333444454444 343332 2232211111
Q ss_pred ----C--------CCCCeEEEEEcc-C-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc-ce-----ecccC
Q psy17188 243 ----G--------HTDGASCIDISA-D-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ-LD-----CLQRD 302 (504)
Q Consensus 243 ----~--------h~~~v~~~~~~~-~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~ 302 (504)
. ....|.++++.| + ...|..+...+.|...+-............. .+... .. .....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~---~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFND---HPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHT---CTTHHHHHCCC----CCC
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccC---CccccccccccccCCCCC
Confidence 1 112577888886 2 4566666656655554332222211100000 00000 00 00123
Q ss_pred CceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceee-ecc---------CCCceeeEEECCCCCCceeeeccCCCe
Q psy17188 303 NYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAE-LTS---------SAPACYALAISPDSKSPFFSSHHYKSC 371 (504)
Q Consensus 303 ~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (504)
..+.++.++|. ...|+++..++.|...+-.......... ... ....+..+.+.|.... .+..+...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~-~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPD-ILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTT-EEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCC-EEEEEcCCe-
Confidence 45788999883 4455555544444443322222111110 000 0124788888886433 233333333
Q ss_pred EEEEecCCCCCCCccccccc-ccC--CCceEEEEEcC-CCCEEEEeeC-----------CCcEEEeeCCCCCccee-ec-
Q psy17188 372 VKVWDISQPGSKTPVSQLDC-LQR--DNYIRSVKLLP-DGRTLIVGGE-----------ASNLSIWDLASPTPRIK-AE- 434 (504)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~-~~~--~~~i~~~~~s~-~g~~l~~~~~-----------dg~i~iwd~~~~~~~~~-~~- 434 (504)
|...+- ... ....... ... ...+..++++| +...|.++.. ++...+|...++-.... ..
T Consensus 255 l~~s~D--~G~--tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 255 IYRMDR--REG--VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp EEEEET--TTT--EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB
T ss_pred EEEeCC--CCC--cceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC
Confidence 333321 111 1111110 111 13456788876 3334444431 23345565444211111 11
Q ss_pred -ccCCCC----ceeEEEECCC-CCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEc
Q psy17188 435 -LTSSAP----ACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 490 (504)
Q Consensus 435 -~~~~~~----~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 490 (504)
+..... ....++++|. ...|+.++.++.|..- ...|+.-..+..+-..+.++.|.
T Consensus 331 glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 331 GLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp TSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence 111110 1135788874 3456666666655432 23455545555455567787764
No 351
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=94.49 E-value=2.4 Score=37.56 Aligned_cols=275 Identities=10% Similarity=0.038 Sum_probs=131.4
Q ss_pred CEEEEEeCCCcEEEEECCCC---------eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE---CCCCceEEEe
Q psy17188 216 KVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD---LREGCVKVWD 283 (504)
Q Consensus 216 ~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd---~~~~~~~~~~ 283 (504)
..+++.+.+|.|+--.+++- ..-..++ ....+..+........|+.-+..|.++... +.....
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r---- 78 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASR---- 78 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCS----
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCc----
Confidence 46778888888886654321 1111122 223444444444444555555666554433 221100
Q ss_pred ecCCCCCCCcccceecccCCceEEEE-EcC--CCCEEEEEeCCCcEEEEeCCCCCc-----cceeeeccCCCceeeEEEC
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVK-LLP--DGRTLIVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAIS 355 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~--~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~~~~~~~~~i~~~~~~ 355 (504)
.....++..+........|..+. ... +..++++.+.+|.++...+..... .....+... ..+..+...
T Consensus 79 ---~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~ 154 (327)
T 3uc1_A 79 ---TARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLC 154 (327)
T ss_dssp ---SSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEE
T ss_pred ---cCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEe
Confidence 00001111111122344555544 432 578999999999999887654221 112223332 344444444
Q ss_pred CCCCCceeeeccCCCeEEEEecC--CCCCC----CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC--
Q psy17188 356 PDSKSPFFSSHHYKSCVKVWDIS--QPGSK----TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-- 427 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i~d~~--~~~~~----~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-- 427 (504)
.... .++..+..|.+..+... .-... .-...+. ......|..+...+++..|+..+..|.++.-.+..-
T Consensus 155 ~~~d--~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~-L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 155 SAGD--DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMR-FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp CTTC--EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSC-CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred cCCC--EEEEEECCCeEEEEECcccccCcCCcCCCCeeeec-CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence 3333 35555567777777665 21111 1111111 234566777777777778999999999888765422
Q ss_pred -----CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce---------EEEEeecCCceEEEEEcc-C
Q psy17188 428 -----TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---------VRQFQGHTDGASCIDISA-D 492 (504)
Q Consensus 428 -----~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~---------~~~~~~h~~~v~~~~~s~-d 492 (504)
+......+......+..+....+...++..+.+|.+..++...-.. +-.+. ..+.|.++...+ +
T Consensus 232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~-~~d~vv~~~~~~~~ 310 (327)
T 3uc1_A 232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLG-EGDTLLAIARNAEE 310 (327)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCC-TTCCEEEEEECC--
T ss_pred cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecC-CCCEEEEEEEcCCC
Confidence 1222233332223344444444555677777888887777643211 11122 234566665544 3
Q ss_pred CCEEEEecCCC
Q psy17188 493 GTKLWTGGLDN 503 (504)
Q Consensus 493 ~~~l~s~s~Dg 503 (504)
...+.+.+++|
T Consensus 311 ~~~~~~~~~~g 321 (327)
T 3uc1_A 311 SGDDNAVDANG 321 (327)
T ss_dssp -----------
T ss_pred cceEEEEecCC
Confidence 45566666654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.43 E-value=3.3 Score=38.83 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=34.3
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe---EEEeec---------CCCCCeEEEEEccC
Q psy17188 205 ACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT---LVRQFQ---------GHTDGASCIDISAD 256 (504)
Q Consensus 205 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~---------~h~~~v~~~~~~~~ 256 (504)
.-+.|+|.||+. .|+++...|.|++++..... .+..+. ........|+++|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 357899999996 45556788999999754221 112111 11457889999996
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=94.00 E-value=5.5 Score=39.74 Aligned_cols=241 Identities=12% Similarity=0.150 Sum_probs=117.6
Q ss_pred EEEE-ECCCCCEEEEE-eCCC----cEEEEECCCCeEEEe-ecCCCC--------CeEEEEEccCCCEEEEE--------
Q psy17188 207 YALA-ISPDSKVCFSC-CSDG----NIAVWDLHNQTLVRQ-FQGHTD--------GASCIDISADGTKLWTG-------- 263 (504)
Q Consensus 207 ~~~~-~s~~~~~l~~~-~~dg----~i~iwd~~~~~~~~~-~~~h~~--------~v~~~~~~~~~~~l~s~-------- 263 (504)
..+. ++|++++++.+ +..| .++++|+.+++.+.. +. ... ....++|..+...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 3444 88998866644 3333 599999999987642 22 111 11344777444344432
Q ss_pred --cCCCeEEEEECCCCc---eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-----EEEEeCC---CcEEEEe
Q psy17188 264 --GLDNTVRSWDLREGC---VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-----LIVGGEA---SNLSIWD 330 (504)
Q Consensus 264 --~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d---g~i~v~d 330 (504)
+....|+.|.+.+.. ..++.. ...........++++++ ++..+.+ ..+.+.+
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~---------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 275 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEV---------------PKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILD 275 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEEC---------------CTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEE
T ss_pred cCCCCCEEEEEECCCChHHCeEEecc---------------CCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEc
Confidence 112467777776542 111111 11122234555666652 3333212 3456666
Q ss_pred CCCCCccceeeeccCCCceeeEEECCCCCCceeeecc---------CCCeEEEEecCCCCC----CCcccccccccCCCc
Q psy17188 331 LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH---------YKSCVKVWDISQPGS----KTPVSQLDCLQRDNY 397 (504)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~ 397 (504)
........ ..+.... . ..+....++. +++.+.. ..+.|...++..... ......+-.......
T Consensus 276 ~~~~~~~~-~~l~~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (711)
T 4hvt_A 276 TKYKNLKL-QKINMPS-D-ATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEV 351 (711)
T ss_dssp CSSSSCEE-EECCSCT-T-CEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEE
T ss_pred CCCCCCcc-eEeecCC-c-ceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCe
Confidence 55322221 1111111 1 1122333433 1222221 466788888876421 111111112233556
Q ss_pred eEEEEEcCCCCEEEEeeCCCc--EEEeeCCCCC-ccee-ecccCCCCceeEEEECCCCCEE-EEeeC---CCcEEEEEcC
Q psy17188 398 IRSVKLLPDGRTLIVGGEASN--LSIWDLASPT-PRIK-AELTSSAPACYALAISPDSKVC-FSCCS---DGNIAVWDLH 469 (504)
Q Consensus 398 i~~~~~s~~g~~l~~~~~dg~--i~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~~~~~l-~s~~~---dg~i~iwd~~ 469 (504)
+..+.+..+ .++++...++. |.++++.+++ .... ..+.. ...+.....++++..+ ++.+. -+.+..+|+.
T Consensus 352 l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 352 FNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 778899876 56777777765 6777765553 1111 22332 2346666666776544 44332 3678888876
No 354
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.49 E-value=9.4 Score=38.08 Aligned_cols=229 Identities=9% Similarity=0.099 Sum_probs=114.3
Q ss_pred EEEE-EccCCCEEEEE-cCC----CeEEEEECCCCceEEEeecCCCCCCCcccce-eccc----CCceEEEEEcCCCCEE
Q psy17188 249 SCID-ISADGTKLWTG-GLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLD-CLQR----DNYIRSVKLLPDGRTL 317 (504)
Q Consensus 249 ~~~~-~~~~~~~l~s~-~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~l 317 (504)
..+. ++|++++++.+ |.. ..++++|+.+++..- . .+. .... ......++|..+ ..+
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~----~--------~~~~~~k~~~~~~~~~~~~~W~d~-~~~ 198 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK----N--------GFEPITNSGKLLEGKFTYPTWINK-DTI 198 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT----T--------CSCCBCTTCCBCCEETCCEEEEET-TEE
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC----C--------CcccccccccccccccceeeEECC-CEE
Confidence 3444 77888866543 222 379999999987420 0 000 0000 001234467633 334
Q ss_pred EEEe-----------CCCcEEEEeCCCCCccceeeeccCCCc-eeeEEECCCCCCc---eeeecc---CCCeEEEEecCC
Q psy17188 318 IVGG-----------EASNLSIWDLASPTPRIKAELTSSAPA-CYALAISPDSKSP---FFSSHH---YKSCVKVWDISQ 379 (504)
Q Consensus 318 ~~~~-----------~dg~i~v~d~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~---~~~~~~---~~~~i~i~d~~~ 379 (504)
+.+. ....++.|.+-+....-...+...... ......+++++.. ++++.+ ....+.+.+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 278 (711)
T 4hvt_A 199 IFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY 278 (711)
T ss_dssp EECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS
T ss_pred EEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC
Confidence 4332 124588888876643333333333222 3345567777652 344322 234566666543
Q ss_pred CCCCCcccccccccCCCceEEEEEcCCCCEEEEee----------CCCcEEEeeCCCCC------cce-eecccCCCCce
Q psy17188 380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPT------PRI-KAELTSSAPAC 442 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----------~dg~i~iwd~~~~~------~~~-~~~~~~~~~~v 442 (504)
... ....+.. .... .+..+.++.+++... ..+.|...++.++. ... ..........+
T Consensus 279 ~~~--~~~~l~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (711)
T 4hvt_A 279 KNL--KLQKINM-PSDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVF 352 (711)
T ss_dssp SSC--EEEECCS-CTTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEE
T ss_pred CCC--cceEeec-CCcc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeE
Confidence 211 1111111 1111 223444665555331 36678889887631 111 11223345567
Q ss_pred eEEEECCCCCEEEEeeCCCc--EEEEEcCCcc-eEEE-Eeec-CCceEEEEEccCCCEEE
Q psy17188 443 YALAISPDSKVCFSCCSDGN--IAVWDLHNQT-LVRQ-FQGH-TDGASCIDISADGTKLW 497 (504)
Q Consensus 443 ~~l~~s~~~~~l~s~~~dg~--i~iwd~~~~~-~~~~-~~~h-~~~v~~~~~s~d~~~l~ 497 (504)
..+.+..+ .++++...++. ++++++.+++ .+.. +.-. .+.+....+++++..++
T Consensus 353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 353 NFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred EEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence 78888876 57777777764 6677776664 2333 3211 24566666667665443
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.10 E-value=8.5 Score=34.78 Aligned_cols=184 Identities=13% Similarity=0.117 Sum_probs=95.0
Q ss_pred cEEEEECCCC--eEEEeecC------CCCCeEEEEEc---cC----CCEEE-EEcCCCeEEEEECCCCceEEEeecCCCC
Q psy17188 226 NIAVWDLHNQ--TLVRQFQG------HTDGASCIDIS---AD----GTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGS 289 (504)
Q Consensus 226 ~i~iwd~~~~--~~~~~~~~------h~~~v~~~~~~---~~----~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~ 289 (504)
.|.+||+.++ +.++++.- ....+..+.+. |+ +.++. +=+..+-|.++|+.+++.....-.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888888 77776643 23457778777 22 23333 3345678999999998754332111000
Q ss_pred CCCccccee----cccCCceEEEEEcCC----CCEEEEEeCCCcEEEEeC-----CCCCccceeeeccCC---CceeeEE
Q psy17188 290 KTPVSQLDC----LQRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDL-----ASPTPRIKAELTSSA---PACYALA 353 (504)
Q Consensus 290 ~~~~~~~~~----~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~v~d~-----~~~~~~~~~~~~~~~---~~i~~~~ 353 (504)
. ....... ..-...+..++++|+ ++.|......+. ++|.+ +........+..+.. .....++
T Consensus 204 d-~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 E-RPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp C-SCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred c-cCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 0 0001111 112356899999998 788887765542 33332 222111111111112 2333455
Q ss_pred EC-CCCCCceeeeccCCCeEEEEecCC-CCCCCcccccccccCCCceEEEEEcCCCCEEEEe
Q psy17188 354 IS-PDSKSPFFSSHHYKSCVKVWDISQ-PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 413 (504)
Q Consensus 354 ~~-~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~ 413 (504)
+. .+|. ++.+--....|..|+... .-.......+.....-.....+.+.++|.+.+..
T Consensus 282 ~D~~~G~--ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKV--IFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCE--EEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCe--EEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 54 4454 777888889999999764 2111111222111223345566666665544443
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.18 E-value=11 Score=34.42 Aligned_cols=158 Identities=12% Similarity=0.078 Sum_probs=76.5
Q ss_pred CCcEEEEEEcC--CCcEEEEecCC----eEEEEeCCCCCCCCceeeee-ecC--------CCCceEEEEEcc-C-CCEEE
Q psy17188 113 GEVVCAVTISN--PTKYVYTGGKG----CVKVWDISQPGSKTPVSQLD-CLQ--------RDNYIRSVKLLP-D-GRTLI 175 (504)
Q Consensus 113 ~~~V~~v~~s~--~~~~l~~~~d~----~i~vw~~~~~~~~~~~~~~~-~~~--------~~~~v~~~~~s~-~-~~~l~ 175 (504)
...|.+|++.| ++.+.+.+..+ .|... .+.+..-..+.... ... ....|.++++.| + ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 45799999998 66777666554 33332 22222112111100 001 123588899987 2 45566
Q ss_pred EecCCCcEEEEeCCCCCccceeeee----------------cCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEE
Q psy17188 176 VGGEASNLSIWDLASPTPRIKAELT----------------SSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLV 238 (504)
Q Consensus 176 ~~~~dg~i~iw~~~~~~~~~~~~~~----------------~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~ 238 (504)
++...+.|...+-............ .....+.+|.+.|. ...|+.+..++.|...+ +.++.-
T Consensus 133 ~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDW 211 (394)
T ss_dssp EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSC
T ss_pred EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCc
Confidence 6655565554432222221111110 11235788999873 34455554444444332 222221
Q ss_pred EeecC-----C--------CCCeEEEEEccC-CCEEEEEcCCCeEEEEE
Q psy17188 239 RQFQG-----H--------TDGASCIDISAD-GTKLWTGGLDNTVRSWD 273 (504)
Q Consensus 239 ~~~~~-----h--------~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd 273 (504)
..+.. + ...+.++.+.|+ ...|+.+...+ |...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 21110 0 124889999985 35666666544 44444
No 357
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.67 E-value=14 Score=33.49 Aligned_cols=155 Identities=10% Similarity=0.127 Sum_probs=79.8
Q ss_pred CceEEEEEc---CC----CCEEEEEe-CCCcEEEEeCCCCCccceee------------eccC----CCceeeEEECCC-
Q psy17188 303 NYIRSVKLL---PD----GRTLIVGG-EASNLSIWDLASPTPRIKAE------------LTSS----APACYALAISPD- 357 (504)
Q Consensus 303 ~~v~~~~~~---~~----~~~l~~~~-~dg~i~v~d~~~~~~~~~~~------------~~~~----~~~i~~~~~~~~- 357 (504)
..+..+.+. |+ +.++..+. ...-|.|+|+.+++...... ..+. ...+..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456777777 22 34444443 45679999998764322111 0110 236788999998
Q ss_pred ---CCCceeeeccCCCeEEEEe---cCCCCCCCcccccccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCCC-CC-
Q psy17188 358 ---SKSPFFSSHHYKSCVKVWD---ISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLAS-PT- 428 (504)
Q Consensus 358 ---~~~~~~~~~~~~~~i~i~d---~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~~-~~- 428 (504)
++.+++...+. ..+.--. ++.......+..+........-..+++. .+|.++++--....|..|+..+ .-
T Consensus 232 ~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 232 SEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLR 310 (381)
T ss_dssp TTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBC
T ss_pred CCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccc
Confidence 55444433332 2222222 2222222222222111111233456775 6777777777788899999875 11
Q ss_pred --cceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188 429 --PRIKAELTSSAPACYALAISPDSKVCFSCC 458 (504)
Q Consensus 429 --~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~ 458 (504)
..........-.....+.+.+++.+.+..+
T Consensus 311 ~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 311 MKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp GGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred cCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 111111222444567778877777666554
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.98 E-value=24 Score=36.63 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=33.6
Q ss_pred CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188 440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 478 (504)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356777888889999999999999999999999887654
No 359
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=86.42 E-value=18 Score=32.55 Aligned_cols=207 Identities=12% Similarity=0.048 Sum_probs=109.3
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe---
Q psy17188 254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD--- 330 (504)
Q Consensus 254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d--- 330 (504)
-|+..++++.+.+|.|+--.+..-.. .... ........ ....+.+..+........|+..+..|.++.+.
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~-----~~r~-g~g~~~~~-lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~e 76 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRA-----QRRG-GRGRSAAS-TKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQ 76 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHH-----TCCC-CCCSEEEE-CSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGG
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhh-----hccC-CCCceecc-cCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHH
Confidence 46777899999999999875432110 0000 00000111 23355666666666667777778888866654
Q ss_pred CCCCC----ccc---eeeeccCCCceeeEEECCC-CCCceeeeccCCCeEEEEecCCCCC--CCcccccccccCCCceEE
Q psy17188 331 LASPT----PRI---KAELTSSAPACYALAISPD-SKSPFFSSHHYKSCVKVWDISQPGS--KTPVSQLDCLQRDNYIRS 400 (504)
Q Consensus 331 ~~~~~----~~~---~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~~~~~~i~~ 400 (504)
+.... ... ...+. ....|..+....+ .....++..+..|.++...+..-.. ..-...+... ....+..
T Consensus 77 ip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~-~~d~lv~ 154 (370)
T 3l6v_A 77 LPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD-EGDALVG 154 (370)
T ss_dssp SCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC-TTCCEEE
T ss_pred CcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC-CCCEEEE
Confidence 33221 111 11122 2334554443321 1222677778899999888654322 1122222222 2445555
Q ss_pred EEEcCCCCEEEEeeCCCcEEEeeCCCCC-------cceeecccCCCCceeEEEECC------------------------
Q psy17188 401 VKLLPDGRTLIVGGEASNLSIWDLASPT-------PRIKAELTSSAPACYALAISP------------------------ 449 (504)
Q Consensus 401 ~~~s~~g~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~------------------------ 449 (504)
+....+...|+..+.+|.+..++...-. -.....+.. ...|.++...+
T Consensus 155 v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~ 233 (370)
T 3l6v_A 155 VALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGA 233 (370)
T ss_dssp EEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC----------------------
T ss_pred EEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEeccccccccccccccccccccccccc
Confidence 5555555678888888987777654211 111222222 23344444333
Q ss_pred -----------CCCEEEEeeCCCcEEEEEcCC
Q psy17188 450 -----------DSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 450 -----------~~~~l~s~~~dg~i~iwd~~~ 470 (504)
++..|++.+..|..+...+..
T Consensus 234 ~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 234 EPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -------------CEEEEEETTSEEEEEEGGG
T ss_pred cccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 456888999999988887643
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.40 E-value=23 Score=31.23 Aligned_cols=167 Identities=10% Similarity=0.110 Sum_probs=94.1
Q ss_pred CCceEEEEEccCCCEEEEecCCCcEEEE---eCCCCCcc----c---eeeeecCcCceEEE-EECC--CCCEEEEEeCCC
Q psy17188 159 DNYIRSVKLLPDGRTLIVGGEASNLSIW---DLASPTPR----I---KAELTSSAPACYAL-AISP--DSKVCFSCCSDG 225 (504)
Q Consensus 159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw---~~~~~~~~----~---~~~~~~~~~~v~~~-~~s~--~~~~l~~~~~dg 225 (504)
.+.+..+........|+.-+..|.++-. ++...... . ...+.. ...|..+ .... +..+++..+.+|
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 4455555555566666666667776544 44332111 0 112222 3345544 4432 567999999999
Q ss_pred cEEEEECCCC-------eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188 226 NIAVWDLHNQ-------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC 298 (504)
Q Consensus 226 ~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (504)
.++--.+..- .....++. ...+..+........|+..+..|.+..+.....++... .........+.
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~----gr~a~Gv~~i~- 193 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPM----GRATSGVQGMR- 193 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCC----CTTSBCEESSC-
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcC----CcCCCCeeeec-
Confidence 9999887542 22223343 34455555555556788888888888887662111100 00001111122
Q ss_pred cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188 299 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 332 (504)
Q Consensus 299 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 332 (504)
......|.++...+++..++..+..|.++.-.+.
T Consensus 194 L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 194 FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 2345567777776777789999999998887654
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.39 E-value=21 Score=30.70 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=111.2
Q ss_pred cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188 115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 194 (504)
Q Consensus 115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 194 (504)
.|..|+....-.+++ . ||.|..|-......... .. .....|..++...+- .++. . ||.|+.|-.......
T Consensus 25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~-p~----~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTM-PA----ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSC-CG----GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCC-Cc----cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC
Confidence 345555544333333 3 78888887654332211 10 112356677665433 2333 4 899999976542211
Q ss_pred ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188 195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL 274 (504)
Q Consensus 195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~ 274 (504)
-. ...-...|..++...+ ..+.-. ||.|+.|-......+..-......|..++...+. .+.-. ||.|..|-.
T Consensus 95 g~--P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~ 166 (282)
T 3qhy_B 95 TV--PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGD 166 (282)
T ss_dssp CC--CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEEC
T ss_pred CC--CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecC
Confidence 00 0011235777776544 333344 8999999765422111111123457776665433 22233 788998876
Q ss_pred CCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188 275 REG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353 (504)
Q Consensus 275 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~ 353 (504)
... ++. .+ ......|..++...+.. ++. .+|.++.|-.......-. . ......+..++
T Consensus 167 n~~gqlg----------~p------~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~-p-~~~~~~v~~i~ 225 (282)
T 3qhy_B 167 NYFGQTT----------VP------AEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTV-P-TEALSGVSAIA 225 (282)
T ss_dssp CTTSTTS----------CC------GGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCC-C-GGGGSSCCEEE
T ss_pred CCCCCCC----------Cc------eecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCC-C-cccCCCceEEE
Confidence 542 210 00 01124567776654433 333 589999997654321111 1 11122466666
Q ss_pred ECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188 354 ISPDSKSPFFSSHHYKSCVKVWDISQP 380 (504)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~ 380 (504)
..... .++.. ++.+..|-....
T Consensus 226 ~G~~h---~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 226 SGEWY---SLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp ECSSC---EEEEE--TTEEEEESTTCC
T ss_pred cCCCE---EEEEE--CCEEEEecCCCC
Confidence 54433 23333 889999976543
No 362
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=82.94 E-value=23 Score=30.89 Aligned_cols=246 Identities=11% Similarity=0.090 Sum_probs=120.7
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEE---------eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 213 PDSKVCFSCCSDGNIAVWDLHNQTLVR---------QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 213 ~~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
|+..++++.+.+|.|+--.+.+-+..+ .++ ....+..+........|+..+..|.++-+....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~e------- 72 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQ------- 72 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGG-------
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhH-------
Confidence 355678889999999887765432211 112 122333333333344555556666655443321
Q ss_pred ecCCCC---CCCcccceecccCCceEEEEEc---CCCCEEEEEeCCCcEEEEeCCCCC-----ccceeeeccCCCceeeE
Q psy17188 284 ISQPGS---KTPVSQLDCLQRDNYIRSVKLL---PDGRTLIVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYAL 352 (504)
Q Consensus 284 ~~~~~~---~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~i~~~ 352 (504)
++.... ..+...+........|.++..- .++.+++..+.+|.++...+.... ......+... ..+..+
T Consensus 73 lp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~ 151 (307)
T 1zi0_A 73 LPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGV 151 (307)
T ss_dssp SCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEE
T ss_pred CcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEE
Confidence 111110 0111111112334456555432 356678899999999988764221 1122223333 344444
Q ss_pred EECCCCCCceeeeccCCCeEEEEecCCCCCC----CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-
Q psy17188 353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP- 427 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~- 427 (504)
....+.. -++..+.+|.+..++...-... .-...+. ......|..+....++..+++.+..|.++-.++..-
T Consensus 152 ~~~~~~~--~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~-L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 152 DLTSGED--EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIR-LGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYP 228 (307)
T ss_dssp EEECTTC--EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC-CCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSC
T ss_pred EEeCCCC--EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEE-eCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhc
Confidence 4443333 3445556777777766432111 1111111 223456767766566667888889999888776321
Q ss_pred ------CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 428 ------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 428 ------~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+......+......+..+....+...++..+.+|.+.-+++..
T Consensus 229 ~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 229 TKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred cCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 1112222333334444444433445566667777777666644
No 363
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=80.62 E-value=32 Score=30.95 Aligned_cols=245 Identities=13% Similarity=0.050 Sum_probs=122.3
Q ss_pred CCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188 212 SPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW 282 (504)
Q Consensus 212 s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 282 (504)
-|+..++++.+.+|.|+--.+.+ +..-..++ ....+..+........|+..+..|.++.+....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~e------ 76 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQ------ 76 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHH------
Confidence 46777899999999998765432 12222333 344555555444455666666677665554321
Q ss_pred eecCCCC---CCCcccceecccCCceEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCC-----ccceeeeccCCCceee
Q psy17188 283 DISQPGS---KTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYA 351 (504)
Q Consensus 283 ~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~i~~ 351 (504)
++..+. ..+...+........|.++..-. ++.+|+.++..|.++...+.... ......+.. ...+..
T Consensus 77 -ip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~ 154 (370)
T 3l6v_A 77 -LPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVG 154 (370)
T ss_dssp -SCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEE
T ss_pred -CcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEE
Confidence 111100 00111111123344555554332 45689999999999988754321 122223333 234444
Q ss_pred EEECCCCCCceeeeccCCCeEEEEecCCCCCC----CcccccccccCCCceEEEEEcC----------------------
Q psy17188 352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQLDCLQRDNYIRSVKLLP---------------------- 405 (504)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~---------------------- 405 (504)
+....... -++..+.+|.+..+....-... .-...+. ......|..+...+
T Consensus 155 v~~~~~~~--~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~-L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 231 (370)
T 3l6v_A 155 VALTDGDR--DVLLFASNGKTVRFGESTVRSMGRTATGVRGIR-LAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTD 231 (370)
T ss_dssp EEEECSCC--EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC-CCTTCCEEEEEEECCC--------------------
T ss_pred EEEeCCCc--eEEEEeCCCeEEEEEccccCccCCCCCCeeeEE-eCCCCEEEEEEEeccccccccccccccccccccccc
Confidence 44443333 3444556677766765431110 1111111 12334555554443
Q ss_pred -------------CCCEEEEeeCCCcEEEeeCCCC-------CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188 406 -------------DGRTLIVGGEASNLSIWDLASP-------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 465 (504)
Q Consensus 406 -------------~g~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i 465 (504)
++..+++.+..|..+...+..- +-+....+......+..+.+..+...++..+..|.+.-
T Consensus 232 g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR 311 (370)
T 3l6v_A 232 GAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVR 311 (370)
T ss_dssp ---------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEE
T ss_pred cccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEE
Confidence 4567888899998888776421 11222233333334444443344455555667776666
Q ss_pred EEc
Q psy17188 466 WDL 468 (504)
Q Consensus 466 wd~ 468 (504)
..+
T Consensus 312 ~~v 314 (370)
T 3l6v_A 312 TRG 314 (370)
T ss_dssp EEG
T ss_pred eeH
Confidence 654
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=80.37 E-value=30 Score=30.45 Aligned_cols=163 Identities=10% Similarity=0.073 Sum_probs=88.9
Q ss_pred CCCcEEEEEEcCCCcEEEEecCCeEEEEe---CCCCCCC---CceeeeeecCCCCceEEEEEcc---CCCEEEEecCCCc
Q psy17188 112 HGEVVCAVTISNPTKYVYTGGKGCVKVWD---ISQPGSK---TPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASN 182 (504)
Q Consensus 112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~---~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~ 182 (504)
.+..+..+..+....+++..+.|.+.-.. +...... .++..+-.......|.++...+ ++.+|+..+.+|.
T Consensus 38 ~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 38 TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 33444445555566777777778755544 4332211 1111111122344566543333 2667888999999
Q ss_pred EEEEeCCCCC------ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCC
Q psy17188 183 LSIWDLASPT------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDG 247 (504)
Q Consensus 183 i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~ 247 (504)
++.-.+..-. ......+... +.+..+....+...++..+.+|.+..++... |.....+. ....
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~ 195 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDY 195 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCC
T ss_pred EEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCE
Confidence 9988775221 1112223332 4455555555556778888899988887643 11222222 2345
Q ss_pred eEEEEEccCCC-EEEEEcCCCeEEEEECCC
Q psy17188 248 ASCIDISADGT-KLWTGGLDNTVRSWDLRE 276 (504)
Q Consensus 248 v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~ 276 (504)
|.++...+++. .|++.+..|..+..++..
T Consensus 196 Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 196 IVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 66665444444 677778888877776653
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=80.23 E-value=27 Score=29.88 Aligned_cols=199 Identities=13% Similarity=0.074 Sum_probs=109.9
Q ss_pred EEEEEcCCCcEEEEecCCeEEE---EeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCC
Q psy17188 117 CAVTISNPTKYVYTGGKGCVKV---WDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT 192 (504)
Q Consensus 117 ~~v~~s~~~~~l~~~~d~~i~v---w~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~ 192 (504)
..+..+....+++..++|.++- |++....... + ......|..+.... +..+++..+.+|.++-..+..-.
T Consensus 28 ~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~----l--l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 28 NILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS----L--KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp EEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC----C--SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred EEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc----c--CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 3344445556777777777654 4443221111 2 23456676664422 56789999999999998876432
Q ss_pred ----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccCCCE
Q psy17188 193 ----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISADGTK 259 (504)
Q Consensus 193 ----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~ 259 (504)
......+.. .+.+..+....+...++..+.+|.+..++... |.....+. ....|..+...+++..
T Consensus 102 ~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 102 YKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPY 179 (276)
T ss_dssp TCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSE
T ss_pred hhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCE
Confidence 111122332 34455555555566788888999988887532 22222233 2355666655555668
Q ss_pred EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE--EeCC
Q psy17188 260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI--WDLA 332 (504)
Q Consensus 260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v--~d~~ 332 (504)
++..+..|.++...+..-... .... .....+ ...+.+..+....+...++..+.+|.+.. ++..
T Consensus 180 ll~~T~~G~~kr~~~~e~~~~-----~R~g-kGv~~i---~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 180 LLVITAKGRVKKISHEEIPKT-----NRGV-KGTEVS---GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEETTSCEEEEEGGGSCCC-----CTTC-CCEECC---CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEeCCCcEEEeEHHHcccC-----CCCC-cceEEE---cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 888888998888876532110 0000 000011 22334444443334446666777788777 7654
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=77.34 E-value=37 Score=29.73 Aligned_cols=204 Identities=10% Similarity=0.033 Sum_probs=107.6
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEE---------EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188 213 PDSKVCFSCCSDGNIAVWDLHNQTLV---------RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283 (504)
Q Consensus 213 ~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 283 (504)
++..++++.+.+|.|+--.+.+-+.. ..++ -...+..+........++..+..|.++-+....-...-+.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45668889999999998876543211 1122 2233444444444556777777887766654321000000
Q ss_pred ecCCCCCCCcccceecccCCceEEEEEcC---CCCEEEEEeCCCcEEEEeCCCC-----CccceeeeccCCCceeeEEEC
Q psy17188 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLASP-----TPRIKAELTSSAPACYALAIS 355 (504)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~v~d~~~~-----~~~~~~~~~~~~~~i~~~~~~ 355 (504)
....++...........|..+...+ +..+++..+..|.++...+... .......+.. ...+..+...
T Consensus 85 ----~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~ 159 (312)
T 1suu_A 85 ----SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIV 159 (312)
T ss_dssp -------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEE
T ss_pred ----CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEe
Confidence 0000111111123344455554333 4677888899999988876432 1122223333 3345555444
Q ss_pred CCCCCceeeeccCCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188 356 PDSKSPFFSSHHYKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~ 425 (504)
.+.. .++..+.+|....+....-.. ..-...+.. .....+..+..-.++..+++.+..|..+..++.
T Consensus 160 ~~~~--~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L-~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 160 FKDE--KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL-KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CTTC--EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC-CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCCC--EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe-CCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 3333 456666788888887754211 111122222 234556676666566778888899998888774
No 367
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=77.09 E-value=43 Score=30.37 Aligned_cols=242 Identities=10% Similarity=0.105 Sum_probs=115.3
Q ss_pred CCEEEEecCCCcEEEEeCCCCCc------c---ceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----
Q psy17188 171 GRTLIVGGEASNLSIWDLASPTP------R---IKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----- 235 (504)
Q Consensus 171 ~~~l~~~~~dg~i~iw~~~~~~~------~---~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~----- 235 (504)
....+.-..||.|+.|-...... . ....+. .....+..++.+......+.-..||.|+.|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 44455556788999886432100 0 001111 11223455667666667777788999999964321
Q ss_pred ------eEEEeecC-CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCC-cccceecccCCceE
Q psy17188 236 ------TLVRQFQG-HTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTP-VSQLDCLQRDNYIR 306 (504)
Q Consensus 236 ------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 306 (504)
.....+.. ....|..++.. ....+....||.|+.|-... +++-. ...... .+..........+.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~-----~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGH-----SDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCS-----SSCCCEEEEEECGGGTTSCEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCC-----CCCcccccceEecccCCCeEE
Confidence 11111221 12256666554 34556667789999997543 11100 000000 00011111233466
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCc---------cceeeecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188 307 SVKLLPDGRTLIVGGEASNLSIWDLASPTP---------RIKAELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376 (504)
Q Consensus 307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d 376 (504)
.++........++-..+|.++.|-...... .....+.. ....+..++.... ..+.-..++.|..|-
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~----hs~alt~~G~v~~wG 290 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ----FSVALTKSGAVYTWG 290 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT----EEEEEETTSCEEEEE
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC----EEEEEeCCCeEEEEe
Confidence 666554335666667889999996432110 00111111 1123444444332 233335678888886
Q ss_pred cCCCCCC------Cc--ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188 377 ISQPGSK------TP--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 426 (504)
Q Consensus 377 ~~~~~~~------~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~ 426 (504)
....... .. ..... ......|..++... ...++-..||.|+.|-...
T Consensus 291 ~n~~GqLG~g~~~~~~~P~~v~-~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 291 KGDYHRLGHGSDDHVRRPRQVQ-GLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECG-GGTTCCEEEEEECS--SEEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCCCCCccccCCeEec-cCCCCCEEEEEecc--CeEEEECCCCCEEEeeCCC
Confidence 5432111 00 00011 01123455555543 3445556889999997654
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.83 E-value=10 Score=36.63 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=42.1
Q ss_pred eeEEEECCCCCEEEEeeCC------------CcEEEEEcCCcceEEEEeecC-CceEEEEEccCCCEEEEe
Q psy17188 442 CYALAISPDSKVCFSCCSD------------GNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTG 499 (504)
Q Consensus 442 v~~l~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l~s~ 499 (504)
.-.|+|+|+|++++.-..+ ..+.+.+..++++..-+.++. .+++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4567999999977655432 235566777777766665544 579999999999998875
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.33 E-value=18 Score=34.55 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=43.7
Q ss_pred CceeEEEECCCCCEEEEeeC------------CCcEEEEEcCCcceEEEEeec-CCceEEEEEccCCCEEEEec
Q psy17188 440 PACYALAISPDSKVCFSCCS------------DGNIAVWDLHNQTLVRQFQGH-TDGASCIDISADGTKLWTGG 500 (504)
Q Consensus 440 ~~v~~l~~s~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~s~d~~~l~s~s 500 (504)
.....|.|.++|.+.+.... ...+..++..++++...+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34677899999998874322 125667777778766655543 35689999999999998753
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.93 E-value=7.4 Score=41.47 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=32.4
Q ss_pred ceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188 441 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 478 (504)
Q Consensus 441 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 478 (504)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556777888999999999999999999999987754
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.80 E-value=33 Score=36.59 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=31.0
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec
Q psy17188 206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 242 (504)
Q Consensus 206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 242 (504)
+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455666788899999999999999999999988753
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.70 E-value=45 Score=28.53 Aligned_cols=161 Identities=7% Similarity=-0.003 Sum_probs=89.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEe---CCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWD---LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ 379 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 379 (504)
+.+..+........|+.-+..|.++... +....... . +. ....+..+.. ++.....++..+.+|.++...+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHH
Confidence 3444444444445566666778766543 32221111 1 22 3345555544 320122778888899999988765
Q ss_pred CCC-CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-------CcceeecccCCCCceeEEEECCCC
Q psy17188 380 PGS-KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-------TPRIKAELTSSAPACYALAISPDS 451 (504)
Q Consensus 380 ~~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~~~ 451 (504)
-.. ..-...... ..+..+..+........++..+..|.+..++...- .-.....+... ..|..+...+++
T Consensus 100 ~~~~~~G~~~i~l-kegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~ 177 (276)
T 3no0_A 100 FEYKAQGMPIIKL-TEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSGLRIWNGE 177 (276)
T ss_dssp TTTCSTTEECSCC-CTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEEEEEESSC
T ss_pred hhhhcCCeEEEec-CCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEEEEEeCCC
Confidence 321 111111222 23455666666666668888889999887765321 11122233332 446555555567
Q ss_pred CEEEEeeCCCcEEEEEcC
Q psy17188 452 KVCFSCCSDGNIAVWDLH 469 (504)
Q Consensus 452 ~~l~s~~~dg~i~iwd~~ 469 (504)
..++..+..|.++...+.
T Consensus 178 ~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SEEEEEETTSCEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHH
Confidence 788999999999988764
No 373
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=72.43 E-value=83 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=50.5
Q ss_pred cEEEEEEcCC--CcEEEEecCCeEEEEeCCCCCCCCceeeeee-cC----CCCceEEEEEcc-CCCEEEEecCC------
Q psy17188 115 VVCAVTISNP--TKYVYTGGKGCVKVWDISQPGSKTPVSQLDC-LQ----RDNYIRSVKLLP-DGRTLIVGGEA------ 180 (504)
Q Consensus 115 ~V~~v~~s~~--~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~s~-~~~~l~~~~~d------ 180 (504)
.|..|+++|. +.+++....+.|..++ .++ .....+.. .. ....|.+|++.| +.+.++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~--D~G--~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD--PST--ETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE--TTT--TEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC--CCC--CCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 7899999985 4555544455554443 221 11111111 01 124589999998 43444443321
Q ss_pred -CcEEEEeCCCCCccceeeeecC--------cCceEEEEECCC-CCEEEEEeC
Q psy17188 181 -SNLSIWDLASPTPRIKAELTSS--------APACYALAISPD-SKVCFSCCS 223 (504)
Q Consensus 181 -g~i~iw~~~~~~~~~~~~~~~~--------~~~v~~~~~s~~-~~~l~~~~~ 223 (504)
+...||...++-.......... ...+..|++.|. .+.++.+..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 1245555443322211111111 012457888884 356666653
No 374
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=72.04 E-value=50 Score=28.84 Aligned_cols=201 Identities=12% Similarity=0.100 Sum_probs=110.3
Q ss_pred CCCcEEEEec-CCeEEEEeCCCCCCC----CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC---CCcc
Q psy17188 123 NPTKYVYTGG-KGCVKVWDISQPGSK----TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---PTPR 194 (504)
Q Consensus 123 ~~~~~l~~~~-d~~i~vw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~---~~~~ 194 (504)
++..++++.+ +|.|+--.+..-... .....+.. ...+.+..+........++..+..|.++-..... ....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~l-ke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDL-NDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceeccc-CCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 3455555555 899988766432111 11222222 2344555555555666777777888877665532 1100
Q ss_pred -------ceeeeecCcCceEEEEECC---CCCEEEEEeCCCcEEEEECCC-------CeEEEeecCCCCCeEEEEEccCC
Q psy17188 195 -------IKAELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDLHN-------QTLVRQFQGHTDGASCIDISADG 257 (504)
Q Consensus 195 -------~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~ 257 (504)
....+.. ...|.++...+ +..+|+..+.+|.++...+.. |.....+.. .+.+..+....++
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 0112222 23344443332 456788889999999888743 333333443 4566666555555
Q ss_pred CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17188 258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 333 (504)
Q Consensus 258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 333 (504)
..++..+.+|.+..+....-.. ..........+.. .....+..+....++..+++.+..|..+..++..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~------~gR~~~Gv~~i~L-~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRL------TNRGTQGVCGMKL-KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCB------CCTTBCCEECCCC-CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccc------cCCCCCCeEeEEe-CCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 6788888899988887653110 0000111112222 2345566666655667788888999988887743
No 375
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=69.83 E-value=52 Score=28.16 Aligned_cols=224 Identities=9% Similarity=0.019 Sum_probs=114.7
Q ss_pred CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 239 (504)
Q Consensus 160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 239 (504)
..|..++....- .++. . ||.|+.|-.......-. . ......|..++...+. .++. . ||.|+.|-......+.
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~-p-~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTM-P-AATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSC-C-GGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCC-C-ccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC
Confidence 357777765432 2333 4 89999997654321111 1 1122346677765443 3333 4 8999999765422111
Q ss_pred eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188 240 QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 318 (504)
Q Consensus 240 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 318 (504)
.-..-...|..++...+ ..+.-. ||.|+.|-... +++- . .......|..++...+. .+
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---------------~-~~~~~~~i~~i~~G~~~--~~ 154 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---------------V-PAEAQSGVTALDGGVYT--AL 154 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---------------C-CGGGGSSEEEEEECSSE--EE
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---------------C-CccCCCCeEEEEcccCE--EE
Confidence 11111346777776644 333344 89999997654 2210 0 01122346666654433 22
Q ss_pred EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188 319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398 (504)
Q Consensus 319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (504)
.-. ||.++.|-......... .......+..++...+. .++. .++.+..|-........... .....|
T Consensus 155 ~l~-~G~v~~wG~n~~gqlg~--p~~~~~~v~~i~~G~~h---s~al--~~G~v~~wG~n~~gqlg~p~-----~~~~~v 221 (282)
T 3qhy_B 155 AVK-NGGVIAWGDNYFGQTTV--PAEAQSGVDDVAGGIFH---SLAL--KDGKVIAWGDNRYKQTTVPT-----EALSGV 221 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTSC--CGGGGSSEEEEEECSSE---EEEE--ETTEEEEEECCTTSTTCCCG-----GGGSSC
T ss_pred EEE-CCEEEEecCCCCCCCCC--ceecCCCeEEEEecCCE---EEEE--ECCeEEEEECCCCCCCCCCc-----ccCCCc
Confidence 233 78999997654321111 11112356666654443 2333 48999999765543322111 112346
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPT 428 (504)
Q Consensus 399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~ 428 (504)
..++...+.. ++.. ||.|+.|-.....
T Consensus 222 ~~i~~G~~h~-~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 222 SAIASGEWYS-LALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp CEEEECSSCE-EEEE--TTEEEEESTTCCC
T ss_pred eEEEcCCCEE-EEEE--CCEEEEecCCCCc
Confidence 6776655433 3333 9999999766543
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.63 E-value=1.3e+02 Score=29.93 Aligned_cols=37 Identities=14% Similarity=0.330 Sum_probs=29.6
Q ss_pred ceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188 441 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 479 (504)
Q Consensus 441 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 479 (504)
.|.++.+ +..+|++-+.|.++|+|++++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3544444 478999999999999999999998877653
No 377
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.22 E-value=35 Score=33.00 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=40.6
Q ss_pred CeEEEEEccCCCEEEEEcCC------------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188 247 GASCIDISADGTKLWTGGLD------------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314 (504)
Q Consensus 247 ~v~~~~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 314 (504)
..-.|+|+|.|++++.-..+ ..+.+.+..+++++. +.......+++.++|+||+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r--------------f~~~P~gaE~TG~~fspDg 542 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR--------------FMVGPIGCEVTGISFSPDQ 542 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE--------------EEECCTTCEEEEEEECTTS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEE--------------EEeCCCCccCcCeeECCCC
Confidence 34678999999866654322 245556666666542 2233456789999999999
Q ss_pred CEEEEE
Q psy17188 315 RTLIVG 320 (504)
Q Consensus 315 ~~l~~~ 320 (504)
+.|++.
T Consensus 543 ~tlfvn 548 (592)
T 3zwu_A 543 KTLFVG 548 (592)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 988775
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=59.16 E-value=90 Score=27.12 Aligned_cols=199 Identities=12% Similarity=0.095 Sum_probs=102.7
Q ss_pred CCcEEEEec-CCeEEEEeCCCCCCCC----ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC---CCCCc--
Q psy17188 124 PTKYVYTGG-KGCVKVWDISQPGSKT----PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL---ASPTP-- 193 (504)
Q Consensus 124 ~~~~l~~~~-d~~i~vw~~~~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~---~~~~~-- 193 (504)
+..++++.+ +|.|+--.+..-.... ....+.. ...+.+..+........|+..+..|.++-+.. .....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~-ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARI-KEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeee-CCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 344555555 8888877664421110 1111111 23344555555555666777777888655543 32211
Q ss_pred --cc---eeeeecCcCceEEEEE-C--CCCCEEEEEeCCCcEEEEECCC-------CeEEEeecCCCCCeEEEEEccCCC
Q psy17188 194 --RI---KAELTSSAPACYALAI-S--PDSKVCFSCCSDGNIAVWDLHN-------QTLVRQFQGHTDGASCIDISADGT 258 (504)
Q Consensus 194 --~~---~~~~~~~~~~v~~~~~-s--~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~ 258 (504)
.. ...+. ....|.++.. . .++.+++..+.+|.++-..+.. +.....+..+ +.+..+....+..
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 00 11222 2334555543 2 3456788899999999987642 2222233333 5555555554555
Q ss_pred EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188 259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 332 (504)
Q Consensus 259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 332 (504)
.++..+.+|.+..++...-. ... ........+. ......|.++....++..+++.+..|..+..++.
T Consensus 159 ~i~l~T~~G~~irf~~~~v~--~~g----r~a~Gv~~i~-L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVR--AMG----CNTTGVRGIR-LGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSC--BCC----TTCCCEECCC-CCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEECCCCcEEEEEHHHcC--ccC----CCCCCeEeEE-eCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 67778888888777654311 000 0001111111 2234566666655566678888999998888763
No 379
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.07 E-value=57 Score=31.29 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=40.5
Q ss_pred CCeEEEEEccCCCEEEEEcC------------CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188 246 DGASCIDISADGTKLWTGGL------------DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 313 (504)
Q Consensus 246 ~~v~~~~~~~~~~~l~s~~~------------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 313 (504)
.....|.|.++|.+.+.... ...+..++..+++++.+ ........++.++|+||
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~f--------------l~~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF--------------MVGPIGCEVTGISFSPD 541 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEE--------------EECCTTCEEEEEEECTT
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEE--------------EeCCCCccccCCEECCC
Confidence 34567899999976663321 12566667766765422 11123467899999999
Q ss_pred CCEEEEEe
Q psy17188 314 GRTLIVGG 321 (504)
Q Consensus 314 ~~~l~~~~ 321 (504)
++.|++.-
T Consensus 542 ~ktLfV~v 549 (592)
T 4a9v_A 542 QKTLFVGI 549 (592)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 99888763
No 380
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=57.68 E-value=99 Score=27.13 Aligned_cols=249 Identities=11% Similarity=0.058 Sum_probs=122.4
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188 213 PDSKVCFSCCSDGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG 288 (504)
Q Consensus 213 ~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~ 288 (504)
|+..++++.+.+|.|+--.+.+- .....++. ...+..+........|+..+..|.++-+....-. . .....
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp--~--~~r~a 77 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELP--D--IRWKD 77 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSC--B--CCTTS
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCc--C--CCCCC
Confidence 56667888999999987765421 11112232 2334444444445566666777776555432100 0 00000
Q ss_pred CCCCcccceecccCCceEEE-EEcC--CCCEEEEEeCCCcEEEEeCCCCC------ccceeeeccCCCceeeEEECCCCC
Q psy17188 289 SKTPVSQLDCLQRDNYIRSV-KLLP--DGRTLIVGGEASNLSIWDLASPT------PRIKAELTSSAPACYALAISPDSK 359 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~v~d~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~ 359 (504)
...++...........|.++ ...+ ++.+++..+.+|.++...+.... ......+... ..+..+.......
T Consensus 78 ~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 78 LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMN 156 (323)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCS
T ss_pred CCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCC
Confidence 00111111112334445554 3432 35678899999999988764221 1222223333 3444444443333
Q ss_pred CceeeeccCCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCC-------
Q psy17188 360 SPFFSSHHYKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASP------- 427 (504)
Q Consensus 360 ~~~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~------- 427 (504)
-++..+.+|.+..+....-.. ..-...... .....|..+...+++. .|++.+..|..+..++..-
T Consensus 157 --~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~ 233 (323)
T 1wp5_A 157 --ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL-KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAK 233 (323)
T ss_dssp --EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTS
T ss_pred --EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe-CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCC
Confidence 355556677777777643211 111222222 2345566665544445 7888888888777766431
Q ss_pred Ccceeec-ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188 428 TPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 470 (504)
Q Consensus 428 ~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 470 (504)
+...... +......+..+....++..++..+.+|.+...++..
T Consensus 234 kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 234 RGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 1111111 212222344333333345566677778777666643
No 381
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.91 E-value=2.1e+02 Score=29.73 Aligned_cols=37 Identities=22% Similarity=0.160 Sum_probs=30.4
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339 (504)
Q Consensus 303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 339 (504)
..+.+++..++..++++-+.|+++++|++.+++....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3567788888889999999999999999998754433
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=51.39 E-value=1.4e+02 Score=26.93 Aligned_cols=209 Identities=10% Similarity=0.099 Sum_probs=97.4
Q ss_pred cEEEEEEcCCCcEE-EEecCCeEEEEeCCCCCCC-----Cceeeeeec-C-CCCceEEEEEccCCCEEEEecCCCcEEEE
Q psy17188 115 VVCAVTISNPTKYV-YTGGKGCVKVWDISQPGSK-----TPVSQLDCL-Q-RDNYIRSVKLLPDGRTLIVGGEASNLSIW 186 (504)
Q Consensus 115 ~V~~v~~s~~~~~l-~~~~d~~i~vw~~~~~~~~-----~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 186 (504)
.+..++++...... +...||.|..|-....... ......... . ....|..++.. ....++-..+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 45556665544443 4444899999965331110 000100000 1 12245555543 3444555678999999
Q ss_pred eCCCCC------c--c-ceeee-ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------eEEEeecC-C
Q psy17188 187 DLASPT------P--R-IKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-----------TLVRQFQG-H 244 (504)
Q Consensus 187 ~~~~~~------~--~-~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~-h 244 (504)
-..... . . ....+ ......|..++........+.-..||.|+.|-.... .....+.. .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 263 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 263 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC
Confidence 653210 0 0 00111 112234666666543345666678999999964321 11111221 1
Q ss_pred CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 323 (504)
Q Consensus 245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 323 (504)
...|..++... ...+.-..||.|+.|-.... ++-. ... .....+..........|..++... ...++...+
T Consensus 264 ~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqLG~---g~~-~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~ 335 (389)
T 3kci_A 264 GLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRLGH---GSD-DHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTED 335 (389)
T ss_dssp TSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTTCS---SSC-CCEEEEEECGGGTTCCEEEEEECS--SEEEEEETT
T ss_pred CCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCCCC---CCC-ccccCCeEeccCCCCCEEEEEecc--CeEEEECCC
Confidence 22466665543 34455567899999975431 1100 000 000000000011123455555433 344555688
Q ss_pred CcEEEEeCCC
Q psy17188 324 SNLSIWDLAS 333 (504)
Q Consensus 324 g~i~v~d~~~ 333 (504)
|.++.|-...
T Consensus 336 G~v~~wG~n~ 345 (389)
T 3kci_A 336 GEVYTWGDND 345 (389)
T ss_dssp CCEEEEECCT
T ss_pred CCEEEeeCCC
Confidence 8999997653
No 383
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.98 E-value=28 Score=34.38 Aligned_cols=37 Identities=14% Similarity=0.330 Sum_probs=30.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 243 (504)
Q Consensus 205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 243 (504)
.|.++.+ +..++++-+.|.++++|++++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555555 467999999999999999999998877653
No 384
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.81 E-value=1.2e+02 Score=28.52 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=43.2
Q ss_pred eeeEEECC----CCCCceeeeccCCCeEEEEecCCCCC-----CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188 349 CYALAISP----DSKSPFFSSHHYKSCVKVWDISQPGS-----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 419 (504)
Q Consensus 349 i~~~~~~~----~~~~~~~~~~~~~~~i~i~d~~~~~~-----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i 419 (504)
.+.++... ++...++..|..+|.|.-.-+..... ...+..+.......+|..|.++++..+|++++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 45554432 35555777788888765544432211 1122223333346788999999999999999887755
Q ss_pred EE
Q psy17188 420 SI 421 (504)
Q Consensus 420 ~i 421 (504)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 385
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.50 E-value=3.9e+02 Score=26.95 Aligned_cols=62 Identities=6% Similarity=0.199 Sum_probs=30.8
Q ss_pred ceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCccceeee--e---cCcCceEEEEECCC-CCEEEEEeCC
Q psy17188 161 YIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAEL--T---SSAPACYALAISPD-SKVCFSCCSD 224 (504)
Q Consensus 161 ~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~---~~~~~v~~~~~s~~-~~~l~~~~~d 224 (504)
.+..+++.|. .+.+..+...+.| |...++-....... . .....+..+.+.|. +..++++..+
T Consensus 122 ~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 122 NGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp SCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred ceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 3567888874 4556666534433 33332211111111 1 11245788999884 4456666554
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.44 E-value=1.5e+02 Score=27.90 Aligned_cols=69 Identities=10% Similarity=0.132 Sum_probs=42.5
Q ss_pred ceEEEEEcC----CCC--EEEEeeCCCcEEEeeCC-CCC-------cceeecccCCCCceeEEEECCCCCEEEEeeCCCc
Q psy17188 397 YIRSVKLLP----DGR--TLIVGGEASNLSIWDLA-SPT-------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 462 (504)
Q Consensus 397 ~i~~~~~s~----~g~--~l~~~~~dg~i~iwd~~-~~~-------~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~ 462 (504)
..++++... ++. .++.|+.+|.|.-.-+. ... .+..........+|..|.++++..+|.+++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456666553 243 47788999986544332 211 1112223233467899999999999999988875
Q ss_pred EEE
Q psy17188 463 IAV 465 (504)
Q Consensus 463 i~i 465 (504)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 387
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=30.92 E-value=4e+02 Score=26.32 Aligned_cols=77 Identities=9% Similarity=0.162 Sum_probs=48.8
Q ss_pred cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC-----cceeecccCCCCceeEEEEC-CCCCEEEEeeCCCcEEEE
Q psy17188 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYALAIS-PDSKVCFSCCSDGNIAVW 466 (504)
Q Consensus 393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~s-~~~~~l~s~~~dg~i~iw 466 (504)
..+..|..+....+..+++.++..|.++.-.+..-. ......+.... .+..+... ..+..++..+.+|....|
T Consensus 551 ~~~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~d-~lv~~~~~~~~~~~v~l~t~~g~~lrf 629 (716)
T 1zvu_A 551 PPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENA-HVMPPVVIEDASDMLLAITQAGRMLMF 629 (716)
T ss_dssp CTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTC-CBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCCCeEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeCCCC-EEEEEEEecCCCCEEEEEeCCCeEEEE
Confidence 345567666555577888899999999888764321 12223333332 23333444 345678889999999999
Q ss_pred EcCC
Q psy17188 467 DLHN 470 (504)
Q Consensus 467 d~~~ 470 (504)
+...
T Consensus 630 ~~~~ 633 (716)
T 1zvu_A 630 PVSD 633 (716)
T ss_dssp ESTT
T ss_pred EHHH
Confidence 8754
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=30.53 E-value=53 Score=31.36 Aligned_cols=74 Identities=9% Similarity=-0.035 Sum_probs=45.8
Q ss_pred ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCCCceE-EEEEcCCCCEEEEeeCCCcEEE
Q psy17188 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRDNYIR-SVKLLPDGRTLIVGGEASNLSI 421 (504)
Q Consensus 348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~-~~~~s~~g~~l~~~~~dg~i~i 421 (504)
..+.++....+...++..|..+|.|.-..+...... .....+.......+|. .+.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 456666666666667778888888766555432111 1122222223355674 8999999999999887764444
No 389
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=29.40 E-value=1.4e+02 Score=28.38 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=45.1
Q ss_pred ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce-EEEEEcCCCCEEEEeeCCCcEEE
Q psy17188 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI-RSVKLLPDGRTLIVGGEASNLSI 421 (504)
Q Consensus 348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i-~~~~~s~~g~~l~~~~~dg~i~i 421 (504)
..+.++........++..|..+|.|.-.-+...........+.. ....+| ..+.++++...|++++.++.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45555554444444677788888877555532222222233332 445567 48999999999999988876655
No 390
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.80 E-value=4e+02 Score=25.58 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=20.4
Q ss_pred cCCCceEEEEEcCCC--CEEEEeeCCC----cEEEeeCCCCCcceee
Q psy17188 393 QRDNYIRSVKLLPDG--RTLIVGGEAS----NLSIWDLASPTPRIKA 433 (504)
Q Consensus 393 ~~~~~i~~~~~s~~g--~~l~~~~~dg----~i~iwd~~~~~~~~~~ 433 (504)
.|...+....|.|+. ..++.+.+++ -..+.|..+++.+...
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 455555555666652 3444444331 2445666666554443
No 391
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=24.88 E-value=2.5e+02 Score=27.66 Aligned_cols=66 Identities=11% Similarity=0.131 Sum_probs=39.8
Q ss_pred CCCCCceeeeccCCCeEEE-EecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188 356 PDSKSPFFSSHHYKSCVKV-WDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 421 (504)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~i-~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i 421 (504)
.+++..++..|..+|.|.- ........ ...+..........+|..|.++++.++|++++.++.+++
T Consensus 425 ~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 425 EDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4455556777778887653 22221111 011222333456678899999999999999988775544
No 392
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.17 E-value=1.1e+02 Score=29.33 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=42.8
Q ss_pred ceEEEEEcCCC--CEEEEeeCCCcEEEeeCCCCCc----ceeecccCCCCcee-EEEECCCCCEEEEeeCCCcEEE
Q psy17188 397 YIRSVKLLPDG--RTLIVGGEASNLSIWDLASPTP----RIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAV 465 (504)
Q Consensus 397 ~i~~~~~s~~g--~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~-~l~~s~~~~~l~s~~~dg~i~i 465 (504)
..++++....+ ..++.|+.+|.|.-..+..... .....+.....+|. .|.++++..+|.+++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45666665433 4577889999876555543211 11222333345674 8899999999999987765444
No 393
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.43 E-value=1.8e+02 Score=28.59 Aligned_cols=68 Identities=10% Similarity=0.206 Sum_probs=41.5
Q ss_pred eEEEEEc----CCCC--EEEEeeCCCcEE-EeeCCCCC-------cceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188 398 IRSVKLL----PDGR--TLIVGGEASNLS-IWDLASPT-------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 463 (504)
Q Consensus 398 i~~~~~s----~~g~--~l~~~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i 463 (504)
.+.++.+ ++|+ .++.|+.+|.|. +....... .+..........+|..|.++++.++|.+++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 4455542 3443 577899999864 33222111 11122233456678999999999999999888755
Q ss_pred EE
Q psy17188 464 AV 465 (504)
Q Consensus 464 ~i 465 (504)
+|
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 394
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.22 E-value=2.7e+02 Score=26.83 Aligned_cols=69 Identities=9% Similarity=0.032 Sum_probs=42.1
Q ss_pred ceEEEEEc----CCC---CEEEEeeCCCcEEEeeCCCCC----ccee--ecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188 397 YIRSVKLL----PDG---RTLIVGGEASNLSIWDLASPT----PRIK--AELTSSAPACYALAISPDSKVCFSCCSDGNI 463 (504)
Q Consensus 397 ~i~~~~~s----~~g---~~l~~~~~dg~i~iwd~~~~~----~~~~--~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i 463 (504)
..+.++.. .++ ..++.|+.+|.|.-.-..... .... ........+|..|.++++...|..++.++.+
T Consensus 363 ~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~ 442 (590)
T 3nvq_A 363 HYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVS 442 (590)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEE
T ss_pred cEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEE
Confidence 34555543 344 357788999987644332211 1112 1222345678999999999999988887755
Q ss_pred EE
Q psy17188 464 AV 465 (504)
Q Consensus 464 ~i 465 (504)
+|
T Consensus 443 qV 444 (590)
T 3nvq_A 443 QV 444 (590)
T ss_dssp EE
T ss_pred Ec
Confidence 54
Done!