BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy17189
         (95 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
          Length = 289

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R  A RD  +  D RV++NL+T E+   +P   YF  VQ +I+PYMR+
Sbjct: 1  MELLCHEVDPVRR--AVRDRNLLRDDRVLQNLLTIEERY-LPQCSYFKCVQKDIQPYMRR 57

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 58 MVATWMLEV 66


>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
          Length = 289

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 3/69 (4%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R     DA +  D RV++NL+T E+   +P   YF  VQ +I+PYMR+
Sbjct: 1  MELLCGEVEPVRRAVP--DANLLHDDRVLQNLLTIEERY-LPQCSYFKCVQKDIQPYMRR 57

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 58 MVATWMLEV 66


>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
          Length = 288

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 3/69 (4%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R     DA +  D RV++NL+T E+   +P   YF  VQ +I+PYMR+
Sbjct: 1  MELLCCEVDPVRRAVP--DANLLHDDRVLQNLLTIEERY-LPQCSYFKCVQKDIQPYMRR 57

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 58 MVATWMLEV 66


>sp|P53782|CCND2_XENLA G1/S-specific cyclin-D2 OS=Xenopus laevis GN=ccnd2 PE=2 SV=1
          Length = 291

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R  A  D  +  D RV+ NL+T E+   +P   YF  VQ +I+P+MR+
Sbjct: 1  MELLCCEGDTVRR--AQPDPALLLDDRVLHNLLTVEERY-LPQCSYFKCVQKDIQPFMRR 57

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 58 MVATWMLEV 66


>sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D3 OS=Mus musculus GN=Ccnd3 PE=2 SV=1
          Length = 292

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E        AG D  +  D RV+++L+  E+   VP   YF  VQ EIKP+MRK
Sbjct: 1  MELLCCEG-TRHAPRAGPDPRLLGDQRVLQSLLRLEERY-VPRASYFQCVQKEIKPHMRK 58

Query: 61 IVNSWMQEV 69
          ++  WM EV
Sbjct: 59 MLAYWMLEV 67


>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
          Length = 292

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E        AG D  +  D RV+++L+  E+   VP   YF  VQ EIKP+MRK
Sbjct: 1  MELLCCEG-TRHAPRAGPDPRLLGDQRVLQSLLRLEERY-VPRASYFQCVQREIKPHMRK 58

Query: 61 IVNSWMQEV 69
          ++  WM EV
Sbjct: 59 MLAYWMLEV 67


>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
          Length = 292

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E        AG D  +  D RV+++L+  E+   VP   YF  VQ EIKP+MRK
Sbjct: 1  MELLCCEG-TRHAPRAGPDPRLLGDQRVLQSLLRLEERY-VPRASYFQCVQREIKPHMRK 58

Query: 61 IVNSWMQEV 69
          ++  WM EV
Sbjct: 59 MLAYWMLEV 67


>sp|P48961|CCND3_RAT G1/S-specific cyclin-D3 OS=Rattus norvegicus GN=Ccnd3 PE=2 SV=1
          Length = 293

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E        AG D  +  D RV+++L+  E+   VP   YF  VQ EIKP+MRK
Sbjct: 1  MELLCCEGTRLAP-RAGPDPRLLGDQRVLQSLLRLEERY-VPRGSYFQCVQKEIKPHMRK 58

Query: 61 IVNSWMQEV 69
          ++  WM EV
Sbjct: 59 MLAYWMLEV 67


>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
          Length = 289

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R    R+     + RV++NL+T E+   +P   YF  VQ +I+PYMR+
Sbjct: 1  MELLCCEVDPVRRAVPDRN---LLEDRVLQNLLTIEERY-LPQCSYFKCVQKDIQPYMRR 56

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 57 MVATWMLEV 65


>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
          Length = 288

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R    R+     + RV++NL+T E+   +P   YF  VQ +I+PYMR+
Sbjct: 1  MELLCCEVDPVRRAVPDRN---LLEDRVLQNLLTIEERY-LPQCSYFKCVQKDIQPYMRR 56

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 57 MVATWMLEV 65


>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
          Length = 291

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R  A  D  +  D RV+ NL+T E+   +P   YF  VQ +I+P+MR+
Sbjct: 1  MELLCCEVDPMRR--ALPDPNLLYDDRVLHNLLTIEERY-LPQCSYFKCVQKDIQPFMRR 57

Query: 61 IVNSWMQEV 69
          +V +WM EV
Sbjct: 58 MVATWMLEV 66


>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
          Length = 292

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  DA +  D RV++ ++ +E+    P V YF  VQ EI PYMRKI
Sbjct: 4  QLQCCEVETIRR--AYLDANLLND-RVLQTMLKAEE-TCSPSVSYFKCVQKEILPYMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
          Length = 291

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 1  MELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRK 60
          MEL C E     R  A  D  + TD RV++ ++ +E+    P + YF  VQ EI P MRK
Sbjct: 1  MELLCCEVDTIGR--AHLDRNLITD-RVLQTMLKAEE-TSCPSMSYFKCVQKEILPNMRK 56

Query: 61 IVNSWMQEV 69
          IV +WM EV
Sbjct: 57 IVATWMLEV 65


>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
          Length = 291

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L+C E ++T R  A +D+ +  D RV++ ++ +E+ N +P  +YF  VQ EI P MRKI
Sbjct: 4  QLFCCE-VDTIR-RAYQDSNLLND-RVLQTMLKAEE-NYLPSPNYFKCVQKEIVPKMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|P24385|CCND1_HUMAN G1/S-specific cyclin-D1 OS=Homo sapiens GN=CCND1 PE=1 SV=1
          Length = 295

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  DA +  D RV+  ++ +E+    P V YF  VQ E+ P MRKI
Sbjct: 4  QLLCCEVETIRR--AYPDANLLND-RVLRAMLKAEE-TCAPSVSYFKCVQKEVLPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
          Length = 295

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  DA +  D RV+  ++ +E+    P V YF  VQ EI P MRKI
Sbjct: 4  QLLCCEMETIRR--AYPDANLLND-RVLRAMLKAEE-TCAPSVSYFKCVQKEILPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
          Length = 295

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  DA +  D RV+  ++ +E+    P V YF  VQ EI P MRKI
Sbjct: 4  QLLCCEVETIRR--AYPDANLLND-RVLRAMLKAEE-TCAPSVSYFKCVQKEILPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
          Length = 295

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  D  +  D RV+  ++ +E+    P V YF  VQ EI P MRKI
Sbjct: 4  QLLCCEVETIRR--AYPDTNLLND-RVLRAMLKTEE-TCAPSVSYFKCVQKEIVPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
          Length = 295

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  D  +  D RV+  ++ +E+    P V YF  VQ EI P MRKI
Sbjct: 4  QLLCCEVETIRR--AYPDTNLLND-RVLRAMLKTEE-TCAPSVSYFKCVQREIVPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|Q5R6J5|CCND1_PONAB G1/S-specific cyclin-D1 OS=Pongo abelii GN=CCND1 PE=2 SV=1
          Length = 295

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 2  ELYCSENLNTDRCTAGRDATMYTDSRVMENLITSEQHNGVPPVDYFVSVQTEIKPYMRKI 61
          +L C E     R  A  DA +  D RV+  ++ +E+    P V YF  VQ E+ P MRKI
Sbjct: 4  QLLCCEVETIRR--AYPDANLLND-RVLRAMLKAEE-TCAPSVSYFKCVQKEVLPSMRKI 59

Query: 62 VNSWMQEV 69
          V +WM EV
Sbjct: 60 VATWMLEV 67


>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
          Length = 443

 Score = 33.1 bits (74), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 42  PPVDYFVSVQTEIKPYMRKIVNSWMQEVS 70
           P   Y V VQ +I P MR I+  W+ EVS
Sbjct: 196 PSTSYMVQVQRDIDPTMRGILIDWLVEVS 224


>sp|Q0JNK6|CCB13_ORYSJ Cyclin-B1-3 OS=Oryza sativa subsp. japonica GN=CYCB1-3 PE=2 SV=2
          Length = 470

 Score = 32.0 bits (71), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 20/79 (25%)

Query: 13  RCTAGRDATMYTDSRVMENLITSEQHNGVPPVDY--------------------FVSVQT 52
           +C+   D  +     ++ ++  S+ HN +  VDY                    ++  QT
Sbjct: 177 KCSRASDGVISPKKELIYDIDASDSHNELAVVDYVEDIYRFYRNTENTYRPLCTYMVSQT 236

Query: 53  EIKPYMRKIVNSWMQEVSF 71
           EI   MR I+  W+ EV +
Sbjct: 237 EINERMRAILTDWLIEVHY 255


>sp|D0L1G3|RLMC_HALNC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
           OS=Halothiobacillus neapolitanus (strain ATCC 23641 /
           c2) GN=rlmC PE=3 SV=1
          Length = 379

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)

Query: 39  NGVP----PVDYFVSVQTEIKPYMRKIVNSWMQEVSFPHIFHAFCLSGGAFLIFC--MLP 92
           NG+P    P  +F    T +   +     SW+ EV+  H++  FC  GG F + C  ++P
Sbjct: 198 NGLPFHLRPKSFF-QTNTRVAEQLYATARSWVAEVAPVHMWDLFCGVGG-FALHCADVIP 255

Query: 93  NQV 95
            QV
Sbjct: 256 GQV 258


>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
          Length = 436

 Score = 31.2 bits (69), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 42  PPVDYFVSVQTEIKPYMRKIVNSWMQEVS 70
           P  +Y   VQ +I P MRKI+  W+ EVS
Sbjct: 189 PLANYMELVQRDIDPDMRKILIDWLVEVS 217


>sp|Q3ECW2|CCA34_ARATH Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1
          Length = 370

 Score = 30.8 bits (68), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 42  PPVDYFVSVQTEIKPYMRKIVNSWMQEVS 70
           P  DY   VQ+++ P+MR ++  W+ EV+
Sbjct: 114 PLPDYIEKVQSDLTPHMRAVLVDWLVEVA 142


>sp|C3LWJ3|RLMC_VIBCM 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC OS=Vibrio
           cholerae serotype O1 (strain M66-2) GN=rlmC PE=3 SV=1
          Length = 375

 Score = 30.4 bits (67), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 36  EQHNGVPPV---DYFVSVQTEIKPYMRKIVNSWMQEVSFPHIFHAFCLSGGAFLIFCMLP 92
           EQ N VP V     F     ++   +     +W++E++   ++  FC  GG F + C  P
Sbjct: 196 EQFNDVPMVIRPKSFFQTNPQVAEQLYATARAWVREIAPTQMWDLFCGVGG-FALHCAAP 254

Query: 93  N 93
           N
Sbjct: 255 N 255


>sp|A5F0U5|RLMC_VIBC3 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC OS=Vibrio
           cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
           O395) GN=rlmC PE=3 SV=1
          Length = 375

 Score = 30.4 bits (67), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 36  EQHNGVPPV---DYFVSVQTEIKPYMRKIVNSWMQEVSFPHIFHAFCLSGGAFLIFCMLP 92
           EQ N VP V     F     ++   +     +W++E++   ++  FC  GG F + C  P
Sbjct: 196 EQFNDVPMVIRPKSFFQTNPQVAEQLYATARAWVREIAPTQMWDLFCGVGG-FALHCAAP 254

Query: 93  N 93
           N
Sbjct: 255 N 255


>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
          Length = 460

 Score = 30.0 bits (66), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 14/80 (17%)

Query: 4   YCSENLNTDRCTAGRDATMYTDSR-------------VMENLITSEQHNGVPPVDYFVSV 50
           YCS ++ +D     ++  +  DS              + ++L  SE     P VDY   V
Sbjct: 161 YCSRDVLSDMKKMDKNQIVNIDSNNGDPQLCATFACDIYKHLRASEAKKR-PDVDYMERV 219

Query: 51  QTEIKPYMRKIVNSWMQEVS 70
           Q ++   MR I+  W+ EVS
Sbjct: 220 QKDVNSSMRGILVDWLIEVS 239


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.136    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,026,552
Number of Sequences: 539616
Number of extensions: 1123801
Number of successful extensions: 3140
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3110
Number of HSP's gapped (non-prelim): 29
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)