BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1719
         (73 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q95N27|PP16B_BOVIN Protein phosphatase 1 regulatory inhibitor subunit 16B OS=Bos
           taurus GN=PPP1R16B PE=1 SV=1
          Length = 568

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 1   MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPA 60
           MPYD+CE E  LD IE  MA +G+TQ  I+E RAAPE +M+ D+    A GQDL++ D A
Sbjct: 169 MPYDLCEDEPTLDVIETCMAYQGITQEKINEMRAAPEQQMISDIHCMIAAGQDLDWVD-A 227

Query: 61  SGAT 64
            GAT
Sbjct: 228 QGAT 231


>sp|Q8VHQ3|PP16B_MOUSE Protein phosphatase 1 regulatory inhibitor subunit 16B OS=Mus
           musculus GN=Ppp1r16b PE=2 SV=1
          Length = 568

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1   MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPA 60
           MPYD+CE E  LD IE  MA +G+TQ  I+E RAAPE +M+ D+    A GQDL++ D  
Sbjct: 169 MPYDLCEDEPTLDVIETCMAYQGITQEKINEMRAAPEQKMISDIHCMIAAGQDLDWID-G 227

Query: 61  SGAT 64
            GAT
Sbjct: 228 QGAT 231


>sp|Q96T49|PP16B_HUMAN Protein phosphatase 1 regulatory inhibitor subunit 16B OS=Homo
           sapiens GN=PPP1R16B PE=1 SV=1
          Length = 567

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1   MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPA 60
           MPYD+CE E  LD IE  MA +G+TQ  I+E R APE +M+ D+    A GQDL++ D A
Sbjct: 169 MPYDLCEDEPTLDVIETCMAYQGITQEKINEMRVAPEQQMIADIHCMIAAGQDLDWID-A 227

Query: 61  SGAT 64
            GAT
Sbjct: 228 QGAT 231


>sp|Q96I34|PP16A_HUMAN Protein phosphatase 1 regulatory subunit 16A OS=Homo sapiens
           GN=PPP1R16A PE=1 SV=1
          Length = 528

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 1   MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLE 55
           MPYD+C+ E  LD +E  MA RG+TQ  I+  RA PE RML+D+ +    G DL 
Sbjct: 172 MPYDLCDDEQTLDCLETAMADRGITQDSIEAARAVPELRMLDDIRSRLQAGADLH 226


>sp|Q923M0|PP16A_MOUSE Protein phosphatase 1 regulatory subunit 16A OS=Mus musculus
           GN=Ppp1r16a PE=1 SV=1
          Length = 524

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 1   MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPA 60
           MPYD+CE    LD +E  MA +G+TQ  I+E RA PE  ML DL      G +L   DP 
Sbjct: 172 MPYDLCEDAQTLDCLETAMANQGITQEGIEEARAVPELCMLNDLQNRLQAGANL--SDPL 229

Query: 61  -SGAT 64
             GAT
Sbjct: 230 DHGAT 234


>sp|Q23919|PGM1_DICDI Phosphoglucomutase-1 OS=Dictyostelium discoideum GN=pgmA PE=2 SV=1
          Length = 572

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 4   DICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGA 63
           D   AEA + H+  ++ ++ +             T + + L  E A   D EYKDP   +
Sbjct: 441 DTAPAEAMMKHVSQQIESKQLI--------GKKFTGISDSLEYEIASCDDFEYKDPIDSS 492

Query: 64  TPSVNGLR 71
             S  GLR
Sbjct: 493 VSSHQGLR 500


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.127    0.351 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,543,790
Number of Sequences: 539616
Number of extensions: 751764
Number of successful extensions: 1910
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1902
Number of HSP's gapped (non-prelim): 14
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)