Query psy1719
Match_columns 73
No_of_seqs 108 out of 310
Neff 5.7
Searched_HMMs 29240
Date Sat Aug 17 00:09:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s70_B 130 kDa myosin-binding 99.0 4.1E-10 1.4E-14 75.4 5.9 71 2-73 142-243 (299)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.0 2.9E-10 9.8E-15 65.7 4.2 42 31-73 38-79 (93)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.0 2.5E-10 8.7E-15 65.9 3.8 42 31-73 5-46 (93)
4 4g8k_A 2-5A-dependent ribonucl 99.0 2.8E-10 9.5E-15 78.1 4.5 45 29-73 26-70 (337)
5 4gpm_A Engineered protein OR26 99.0 3.7E-10 1.3E-14 73.3 4.2 41 32-73 74-114 (169)
6 4gpm_A Engineered protein OR26 99.0 6.7E-10 2.3E-14 72.0 4.8 41 31-72 7-47 (169)
7 3aaa_C Myotrophin, protein V-1 98.9 1.1E-09 3.8E-14 65.7 3.6 42 31-73 43-84 (123)
8 2zgd_A 3 repeat synthetic anky 98.8 2.9E-09 9.8E-14 63.5 4.4 42 31-73 60-101 (110)
9 3aaa_C Myotrophin, protein V-1 98.8 3.3E-09 1.1E-13 63.6 4.4 43 30-73 9-51 (123)
10 2zgd_A 3 repeat synthetic anky 98.8 3.4E-09 1.1E-13 63.2 3.8 43 30-73 26-68 (110)
11 2jab_A H10-2-G3; HER2, darpin, 98.8 4E-09 1.4E-13 64.3 4.2 42 31-73 50-91 (136)
12 1bd8_A P19INK4D CDK4/6 inhibit 98.8 4.2E-09 1.4E-13 64.8 3.8 42 31-73 71-112 (156)
13 1ycs_B 53BP2, P53BP2; ankyrin 98.8 4.9E-09 1.7E-13 69.6 3.9 40 32-72 74-113 (239)
14 1bi7_B P16INK4A, MTS1, multipl 98.8 5.3E-09 1.8E-13 65.1 3.8 42 31-73 81-122 (156)
15 2jab_A H10-2-G3; HER2, darpin, 98.8 6.4E-09 2.2E-13 63.4 3.9 42 31-73 83-124 (136)
16 2rfa_A Transient receptor pote 98.8 6.1E-09 2.1E-13 67.5 4.0 42 31-73 124-165 (232)
17 1ihb_A P18-INK4C(INK6), cyclin 98.8 6.9E-09 2.4E-13 64.0 4.0 41 32-73 74-114 (162)
18 3twr_A Tankyrase-2; ankyrin re 98.8 8.4E-09 2.9E-13 64.1 4.4 41 32-73 79-119 (165)
19 3c5r_A BARD-1, BRCA1-associate 98.7 7.9E-09 2.7E-13 62.8 4.0 42 31-73 46-87 (137)
20 2y1l_E Darpin-8.4; hydrolase-i 98.7 8.8E-09 3E-13 64.7 4.4 42 31-73 50-91 (169)
21 4b93_B Ankyrin repeat domain-c 98.7 2.8E-09 9.5E-14 72.9 2.1 39 32-71 189-227 (269)
22 1sw6_A Regulatory protein SWI6 98.7 6.5E-09 2.2E-13 72.2 4.0 42 31-73 134-175 (327)
23 1d9s_A Cyclin-dependent kinase 98.7 7.8E-09 2.7E-13 63.0 3.7 40 32-72 82-121 (136)
24 1dcq_A PYK2-associated protein 98.7 8.3E-09 2.8E-13 71.1 4.1 40 32-72 209-248 (278)
25 3jxi_A Vanilloid receptor-rela 98.7 2.6E-08 9E-13 65.7 6.2 42 31-73 96-151 (260)
26 3jxi_A Vanilloid receptor-rela 98.7 1E-08 3.5E-13 67.7 4.2 41 31-72 143-186 (260)
27 1d9s_A Cyclin-dependent kinase 98.7 8.5E-09 2.9E-13 62.9 3.5 40 32-73 49-89 (136)
28 4hbd_A KN motif and ankyrin re 98.7 8.5E-09 2.9E-13 70.2 3.8 42 31-73 186-227 (276)
29 3twr_A Tankyrase-2; ankyrin re 98.7 1.1E-08 3.8E-13 63.5 4.0 42 31-73 45-86 (165)
30 3t8k_A Uncharacterized protein 98.7 7.6E-09 2.6E-13 67.7 3.4 41 32-73 42-86 (186)
31 3c5r_A BARD-1, BRCA1-associate 98.7 7.3E-09 2.5E-13 62.9 3.1 39 32-71 80-118 (137)
32 1ycs_B 53BP2, P53BP2; ankyrin 98.7 6.8E-09 2.3E-13 68.9 3.1 49 24-73 33-81 (239)
33 1awc_B Protein (GA binding pro 98.7 1.1E-08 3.6E-13 63.2 3.8 40 32-72 71-110 (153)
34 1oy3_D Transcription factor in 98.7 1.1E-08 3.6E-13 67.4 4.0 41 32-73 196-236 (282)
35 3f6q_A Integrin-linked protein 98.7 1E-08 3.6E-13 64.7 3.8 41 32-73 76-116 (179)
36 2l6b_A NR1C; ankyrin, consensu 98.7 5.7E-09 1.9E-13 61.7 2.2 41 32-73 46-86 (115)
37 3deo_A Signal recognition part 98.7 1.3E-08 4.4E-13 65.0 4.0 41 32-72 80-120 (183)
38 4b93_B Ankyrin repeat domain-c 98.7 7.1E-09 2.4E-13 70.9 2.9 42 31-73 155-196 (269)
39 1sw6_A Regulatory protein SWI6 98.7 5.7E-09 2E-13 72.5 2.4 42 31-73 286-327 (327)
40 2vge_A RELA-associated inhibit 98.7 1.5E-08 5E-13 67.8 4.1 42 31-73 57-98 (229)
41 1n0r_A 4ANK, 4 ankyrin repeats 98.7 1.9E-08 6.4E-13 59.0 4.0 40 32-72 72-111 (126)
42 3ehr_A Osteoclast-stimulating 98.7 1.5E-08 5.3E-13 65.9 4.0 42 31-73 109-151 (222)
43 1awc_B Protein (GA binding pro 98.7 1.7E-08 5.9E-13 62.3 4.0 42 31-73 103-144 (153)
44 3utm_A Tankyrase-1; tankyrase, 98.7 1.6E-08 5.5E-13 68.1 4.1 56 17-73 231-291 (351)
45 1dcq_A PYK2-associated protein 98.7 1.6E-08 5.5E-13 69.7 4.2 42 31-73 172-216 (278)
46 3f6q_A Integrin-linked protein 98.7 1.9E-08 6.3E-13 63.6 4.0 42 31-73 42-83 (179)
47 1k1a_A B-cell lymphoma 3-encod 98.7 1.9E-08 6.4E-13 65.1 4.1 42 31-73 153-194 (241)
48 3hra_A Ankyrin repeat family p 98.7 1.1E-08 3.6E-13 64.9 2.9 31 41-72 158-188 (201)
49 3ljn_A Hypothetical protein; a 98.7 3.3E-08 1.1E-12 68.4 5.5 42 31-73 141-184 (364)
50 2l6b_A NR1C; ankyrin, consensu 98.7 6.8E-09 2.3E-13 61.4 1.8 42 31-73 12-53 (115)
51 3ui2_A Signal recognition part 98.7 1.9E-08 6.4E-13 67.4 4.0 41 32-72 81-121 (244)
52 3deo_A Signal recognition part 98.6 1.4E-08 4.9E-13 64.7 3.3 41 31-72 113-153 (183)
53 1n0r_A 4ANK, 4 ankyrin repeats 98.6 2.9E-08 9.7E-13 58.2 4.3 42 31-73 38-79 (126)
54 2vge_A RELA-associated inhibit 98.6 1.9E-08 6.6E-13 67.1 3.8 44 29-73 22-65 (229)
55 1s70_B 130 kDa myosin-binding 98.6 2.1E-08 7.2E-13 67.0 3.9 42 31-73 76-117 (299)
56 1oy3_D Transcription factor in 98.6 2.3E-08 7.9E-13 65.8 4.0 42 31-73 48-89 (282)
57 3v30_A DNA-binding protein rfx 98.6 2.3E-08 7.8E-13 62.4 3.8 38 33-71 74-111 (172)
58 3v31_A Ankyrin repeat family A 98.6 2.4E-08 8.3E-13 62.1 3.9 40 32-72 73-112 (167)
59 3v31_A Ankyrin repeat family A 98.6 2.4E-08 8.3E-13 62.1 3.8 42 31-73 39-80 (167)
60 1bd8_A P19INK4D CDK4/6 inhibit 98.6 3.6E-08 1.2E-12 60.5 4.4 40 32-73 40-79 (156)
61 2rfm_A Putative ankyrin repeat 98.6 2.7E-08 9.4E-13 63.2 3.9 39 32-71 105-143 (192)
62 3lvq_E ARF-GAP with SH3 domain 98.6 2E-08 6.8E-13 73.8 3.7 40 32-72 211-250 (497)
63 3lvq_E ARF-GAP with SH3 domain 98.6 2.6E-08 8.7E-13 73.3 4.2 42 31-73 174-218 (497)
64 3v30_A DNA-binding protein rfx 98.6 3.1E-08 1E-12 61.9 3.9 42 31-73 39-80 (172)
65 3utm_A Tankyrase-1; tankyrase, 98.6 2.9E-08 1E-12 66.8 4.1 40 32-72 62-101 (351)
66 2xai_A ASB-9, ankyrin repeat a 98.6 3.1E-08 1.1E-12 66.1 3.9 42 31-73 39-80 (261)
67 2pnn_A Transient receptor pote 98.6 9.1E-08 3.1E-12 63.8 6.1 43 31-73 104-159 (273)
68 2y1l_E Darpin-8.4; hydrolase-i 98.6 3.8E-08 1.3E-12 61.7 4.0 41 32-73 84-124 (169)
69 3ehr_A Osteoclast-stimulating 98.6 2.3E-08 7.9E-13 65.0 3.1 40 32-72 77-116 (222)
70 2etb_A Transient receptor pote 98.6 3.9E-08 1.3E-12 64.9 4.1 42 31-73 93-147 (256)
71 3ljn_A Hypothetical protein; a 98.6 6E-08 2E-12 67.1 5.1 48 25-73 17-64 (364)
72 2pnn_A Transient receptor pote 98.6 3.7E-08 1.3E-12 65.7 3.9 42 31-73 151-195 (273)
73 2rfa_A Transient receptor pote 98.6 3.7E-08 1.3E-12 63.8 3.8 41 32-73 41-86 (232)
74 3hra_A Ankyrin repeat family p 98.6 4.6E-08 1.6E-12 62.0 4.0 42 31-73 42-83 (201)
75 1ihb_A P18-INK4C(INK6), cyclin 98.6 5.7E-08 2E-12 59.8 4.4 40 32-73 42-81 (162)
76 2etb_A Transient receptor pote 98.6 4.3E-08 1.5E-12 64.6 4.0 40 31-71 139-181 (256)
77 4g8k_A 2-5A-dependent ribonucl 98.6 4.5E-08 1.5E-12 67.0 4.2 58 15-73 221-284 (337)
78 2fo1_E LIN-12 protein; beta-ba 98.6 3.2E-08 1.1E-12 69.7 3.5 42 31-73 316-357 (373)
79 1k1a_A B-cell lymphoma 3-encod 98.6 7.4E-08 2.5E-12 62.2 4.9 65 8-73 21-90 (241)
80 1n11_A Ankyrin; clathrin, BAND 98.6 2.3E-08 7.9E-13 70.5 2.7 42 31-73 50-91 (437)
81 1ikn_D Protein (I-kappa-B-alph 98.6 1.9E-08 6.3E-13 65.7 1.8 39 32-71 155-193 (236)
82 2dzn_A Probable 26S proteasome 98.6 5.6E-08 1.9E-12 62.5 4.0 40 32-72 144-184 (228)
83 1bi7_B P16INK4A, MTS1, multipl 98.6 4.6E-08 1.6E-12 60.8 3.5 40 32-73 49-89 (156)
84 1n11_A Ankyrin; clathrin, BAND 98.5 3.6E-08 1.2E-12 69.6 3.2 41 32-73 315-355 (437)
85 1ikn_D Protein (I-kappa-B-alph 98.5 6.1E-08 2.1E-12 63.2 4.0 43 31-73 120-162 (236)
86 1yyh_A HN1;, notch 1, ankyrin 98.5 5.5E-08 1.9E-12 64.5 3.8 40 32-72 161-200 (253)
87 2b0o_E UPLC1; arfgap, structur 98.5 5.2E-08 1.8E-12 67.9 3.8 39 32-71 230-268 (301)
88 3aji_A 26S proteasome non-ATPa 98.5 6.6E-08 2.3E-12 62.4 4.0 41 32-73 143-183 (231)
89 2rfm_A Putative ankyrin repeat 98.5 6.8E-08 2.3E-12 61.4 4.0 42 31-73 137-178 (192)
90 3kea_A K1L; tropism, ANK repea 98.5 4.8E-08 1.6E-12 66.5 3.4 42 31-73 65-106 (285)
91 2f8y_A Notch homolog 1, transl 98.5 7E-08 2.4E-12 62.0 3.9 40 32-72 129-168 (223)
92 3jue_A Arfgap with coiled-coil 98.5 6.6E-08 2.3E-12 70.0 4.1 42 31-73 238-279 (368)
93 3ui2_A Signal recognition part 98.5 5.7E-08 1.9E-12 65.0 3.5 40 31-71 114-153 (244)
94 1wdy_A 2-5A-dependent ribonucl 98.5 8.8E-08 3E-12 62.6 4.2 40 32-72 43-82 (285)
95 3aji_A 26S proteasome non-ATPa 98.5 7.8E-08 2.7E-12 62.1 3.8 40 32-72 44-83 (231)
96 2f8y_A Notch homolog 1, transl 98.5 8.7E-08 3E-12 61.5 4.0 40 32-72 29-68 (223)
97 2xai_A ASB-9, ankyrin repeat a 98.5 7.6E-08 2.6E-12 64.2 3.8 40 32-72 7-46 (261)
98 2b0o_E UPLC1; arfgap, structur 98.5 7.2E-08 2.5E-12 67.2 3.8 42 31-73 193-237 (301)
99 1yyh_A HN1;, notch 1, ankyrin 98.5 8.1E-08 2.8E-12 63.7 3.8 42 31-73 60-101 (253)
100 2dzn_A Probable 26S proteasome 98.5 8.6E-08 2.9E-12 61.6 3.8 42 31-73 110-151 (228)
101 3d9h_A CDNA FLJ77766, highly s 98.5 6.8E-08 2.3E-12 65.7 3.3 41 32-73 96-136 (285)
102 3eu9_A Huntingtin-interacting 98.5 6E-08 2.1E-12 62.1 2.9 41 32-72 46-86 (240)
103 3b7b_A Euchromatic histone-lys 98.5 9.7E-08 3.3E-12 61.8 3.9 40 32-72 148-187 (237)
104 3b7b_A Euchromatic histone-lys 98.5 1.1E-07 3.7E-12 61.6 4.1 42 31-73 47-88 (237)
105 3eu9_A Huntingtin-interacting 98.5 1.1E-07 3.7E-12 60.9 3.8 42 31-73 180-221 (240)
106 3t8k_A Uncharacterized protein 98.5 9.7E-08 3.3E-12 62.4 3.5 35 38-73 130-165 (186)
107 4hbd_A KN motif and ankyrin re 98.4 1.3E-07 4.6E-12 64.2 3.6 42 31-73 219-261 (276)
108 1wdy_A 2-5A-dependent ribonucl 98.4 1.9E-07 6.4E-12 61.0 4.0 42 31-73 222-264 (285)
109 3d9h_A CDNA FLJ77766, highly s 98.4 2.9E-07 9.8E-12 62.5 3.9 42 31-73 62-103 (285)
110 3kea_A K1L; tropism, ANK repea 98.3 1.9E-07 6.4E-12 63.6 2.6 44 29-73 162-206 (285)
111 2fo1_E LIN-12 protein; beta-ba 98.3 4.3E-07 1.5E-11 63.9 4.1 42 31-73 169-210 (373)
112 3jue_A Arfgap with coiled-coil 98.3 5.3E-07 1.8E-11 65.2 4.0 42 31-73 271-312 (368)
113 2aja_A Ankyrin repeat family p 98.2 3E-07 1E-11 66.6 0.4 44 29-73 164-210 (376)
114 2aja_A Ankyrin repeat family p 97.7 1.5E-05 5.1E-10 57.7 2.7 51 20-73 86-139 (376)
115 1xn7_A Hypothetical protein YH 82.7 2 6.7E-05 24.8 4.0 42 11-52 3-45 (78)
116 2k02_A Ferrous iron transport 76.8 1.9 6.6E-05 25.6 2.6 44 11-54 3-47 (87)
117 3iuo_A ATP-dependent DNA helic 68.9 9 0.00031 23.4 4.5 40 17-56 26-65 (122)
118 2cxn_A Glucose-6-phosphate iso 68.2 4.1 0.00014 31.5 3.3 48 21-71 57-104 (557)
119 1y0n_A Hypothetical UPF0270 pr 65.4 8.3 0.00028 22.7 3.5 47 1-52 5-51 (78)
120 3dfg_A Xcrecx, regulatory prot 64.9 10 0.00035 24.1 4.3 37 13-49 85-121 (162)
121 1yqf_A Hypothetical protein LM 64.7 11 0.00036 25.1 4.4 27 8-34 155-181 (203)
122 2wu8_A Glucose-6-phosphate iso 64.5 4.3 0.00015 31.3 2.8 47 22-71 52-98 (549)
123 1t10_A GPI, glucose-6-phosphat 63.9 5.1 0.00018 31.3 3.1 48 21-71 104-151 (605)
124 2o2c_A GPI, glucose-6-phosphat 63.8 5 0.00017 31.4 3.0 47 22-71 106-152 (613)
125 2w84_A Peroxisomal membrane pr 63.5 4.9 0.00017 23.3 2.3 23 14-36 37-59 (70)
126 3jv1_A P22 protein; MAM33 fami 59.8 13 0.00044 24.4 4.1 26 8-33 134-159 (182)
127 3ff5_A PEX14P, peroxisomal bio 59.6 6.9 0.00024 21.5 2.3 21 14-34 32-52 (54)
128 3c1d_A Protein ORAA, regulator 56.4 12 0.00043 23.5 3.5 36 13-48 83-118 (159)
129 2jt1_A PEFI protein; solution 55.8 21 0.00072 20.3 4.1 45 9-53 7-54 (77)
130 1p32_A Mitochondrial matrix pr 55.3 16 0.00056 24.2 4.1 42 8-49 159-207 (209)
131 4em6_D Glucose-6-phosphate iso 54.1 9.7 0.00033 29.5 3.1 49 21-72 58-106 (553)
132 2cp9_A EF-TS, EF-TSMT, elongat 54.0 5.7 0.00019 22.5 1.4 33 23-55 7-39 (64)
133 3fyr_A Sporulation inhibitor S 52.7 6.7 0.00023 21.1 1.5 20 7-26 23-42 (48)
134 3ljk_A Glucose-6-phosphate iso 52.6 10 0.00034 29.3 3.0 49 21-72 48-96 (543)
135 3k2z_A LEXA repressor; winged 52.3 32 0.0011 21.9 5.0 45 9-53 8-54 (196)
136 3kz3_A Repressor protein CI; f 51.3 10 0.00035 20.5 2.2 30 6-35 8-37 (80)
137 3hjb_A Glucose-6-phosphate iso 48.2 13 0.00044 28.9 3.0 49 21-72 80-128 (574)
138 3e3v_A Regulatory protein RECX 47.4 25 0.00086 22.6 3.9 23 13-35 87-109 (177)
139 3ujh_A Glucose-6-phosphate iso 46.7 13 0.00045 28.8 2.8 49 21-72 58-106 (567)
140 3oq9_A Tumor necrosis factor r 45.8 22 0.00076 20.8 3.2 33 12-44 12-44 (86)
141 3qv0_A Mitochondrial acidic pr 44.2 35 0.0012 23.4 4.4 26 8-33 179-204 (227)
142 3qki_A Glucose-6-phosphate iso 42.0 16 0.00056 28.5 2.7 49 21-72 70-118 (597)
143 3ezq_A Tumor necrosis factor r 41.8 28 0.00095 21.6 3.3 37 12-48 20-56 (115)
144 2heo_A Z-DNA binding protein 1 41.3 30 0.001 18.6 3.1 41 15-56 15-57 (67)
145 1ass_A Thermosome; chaperonin, 40.2 22 0.00075 22.6 2.7 49 25-73 46-94 (159)
146 3d5l_A Regulatory protein RECX 36.8 47 0.0016 22.0 4.1 23 13-35 130-152 (221)
147 2dk8_A DNA-directed RNA polyme 35.8 22 0.00075 20.8 2.0 40 10-51 18-58 (81)
148 1ich_A TNF-1, tumor necrosis f 31.8 47 0.0016 20.4 3.2 21 16-36 29-49 (112)
149 1gml_A T-complex protein 1 sub 31.7 24 0.00083 22.7 1.9 48 26-73 53-100 (178)
150 1lmb_3 Protein (lambda repress 31.5 32 0.0011 18.6 2.2 28 8-35 15-42 (92)
151 3jtz_A Integrase; four strande 31.4 23 0.0008 20.5 1.6 24 29-57 61-84 (88)
152 2dk5_A DNA-directed RNA polyme 30.0 65 0.0022 18.5 3.5 33 21-53 34-66 (91)
153 2bnk_A Early protein GP16.7; D 27.1 22 0.00074 20.2 0.9 10 9-18 40-49 (67)
154 1lfd_A Ralgds; RAL, effector i 26.7 22 0.00075 21.3 0.9 24 6-29 24-47 (87)
155 2htj_A P fimbrial regulatory p 25.5 86 0.0029 16.8 4.6 39 15-53 5-44 (81)
156 2k9q_A Uncharacterized protein 25.1 79 0.0027 16.5 3.1 24 11-34 3-26 (77)
157 1dlw_A Hemoglobin; oxygen stor 24.8 68 0.0023 18.5 2.9 31 7-37 77-107 (116)
158 1in0_A YAJQ protein, HI1034; a 24.8 52 0.0018 21.7 2.6 19 10-28 60-78 (163)
159 3mol_A Heme acquisition protei 24.8 49 0.0017 22.2 2.5 37 21-57 129-168 (184)
160 3msx_B RHO GTPase-activating p 24.8 1.1E+02 0.0037 19.4 4.1 44 13-58 31-74 (201)
161 1r69_A Repressor protein CI; g 24.8 74 0.0025 15.8 3.3 24 12-35 3-26 (69)
162 1zug_A Phage 434 CRO protein; 23.8 79 0.0027 15.8 3.3 25 11-35 4-28 (71)
163 3b7h_A Prophage LP1 protein 11 23.7 84 0.0029 16.1 3.6 25 10-34 7-31 (78)
164 2r1j_L Repressor protein C2; p 23.4 78 0.0027 15.6 3.0 27 10-36 5-31 (68)
165 2dkl_A Trinucleotide repeat co 23.3 1.2E+02 0.004 17.5 5.2 41 17-57 26-66 (85)
166 1adr_A P22 C2 repressor; trans 23.3 84 0.0029 15.9 3.0 25 11-35 6-30 (76)
167 1wty_A Hypothetical protein TT 23.2 23 0.0008 21.1 0.6 39 10-48 37-76 (119)
168 2xi8_A Putative transcription 22.9 79 0.0027 15.5 2.8 22 14-35 5-26 (66)
169 1qus_A Lytic murein transglyco 22.7 98 0.0034 22.2 3.9 43 3-46 13-55 (322)
170 2lm0_A AF4/FMR2 family member 22.6 34 0.0012 21.7 1.3 21 3-23 102-123 (125)
171 2bmm_A Thermostable hemoglobin 22.5 70 0.0024 18.7 2.7 31 7-37 82-112 (123)
172 2xyk_A 2-ON-2 hemoglobin; oxyg 22.0 71 0.0024 19.3 2.7 32 6-37 88-119 (133)
173 1wj7_A Hypothetical protein (R 21.9 1.4E+02 0.0049 18.1 5.2 44 8-51 36-79 (104)
174 3kzf_A Carbamate kinase; argin 21.6 45 0.0015 24.0 1.9 24 1-24 77-107 (317)
175 3gt0_A Pyrroline-5-carboxylate 21.2 1.4E+02 0.005 19.1 4.3 36 19-57 190-225 (247)
176 3nr7_A DNA-binding protein H-N 21.2 95 0.0033 18.1 3.0 20 11-30 60-79 (86)
177 3aq9_A Group 1 truncated hemog 20.9 93 0.0032 18.1 3.0 31 7-37 82-112 (121)
178 1tlq_A Hypothetical protein YP 20.7 1.1E+02 0.0038 20.6 3.6 23 10-32 10-32 (189)
179 1ywf_A Phosphotyrosine protein 20.7 77 0.0026 21.8 2.9 19 16-34 274-292 (296)
180 2wiu_B HTH-type transcriptiona 20.4 1.1E+02 0.0037 16.1 3.6 26 9-34 11-36 (88)
181 1wji_A Tudor domain containing 20.3 1.2E+02 0.004 16.4 4.9 43 17-59 14-56 (63)
182 2bkm_A Truncated hemoglobin fr 20.3 77 0.0026 18.7 2.6 31 7-37 84-114 (128)
No 1
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.03 E-value=4.1e-10 Score=75.40 Aligned_cols=71 Identities=25% Similarity=0.279 Sum_probs=57.9
Q ss_pred ccccccchhHHHHHHHHHHHcCCCHHhH-------------------------------HHHHhCchhccHHHHHHHHHc
Q psy1719 2 PYDICEAEAALDHIEAEMAARGVTQALI-------------------------------DETRAAPETRMLEDLAAEAAR 50 (73)
Q Consensus 2 p~Diaede~~~~~ie~~m~~~Gi~~~~~-------------------------------~~~r~a~e~~~l~~v~~ll~~ 50 (73)
|+.+|......++++..+.+.|++.... ..++.|+..|..+.|++|+++
T Consensus 142 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (299)
T 1s70_B 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221 (299)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 5666666677777777777777764332 237788899999999999999
Q ss_pred CCCCCCCCCCCCchHHHHhhhcC
Q psy1719 51 GQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 51 Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
|+|+|.+|. .|.||||+|+.+|
T Consensus 222 g~d~~~~d~-~g~tpL~~A~~~~ 243 (299)
T 1s70_B 222 RYDVNIKDY-DGWTPLHAAAHWG 243 (299)
T ss_dssp TCCTTCCCT-TCCCHHHHHHHTT
T ss_pred CCCCCCcCC-CCCcHHHHHHhcC
Confidence 999999999 9999999999875
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.01 E-value=2.9e-10 Score=65.67 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=38.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.++..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 38 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 38 PLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG 79 (93)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC
Confidence 47888899999999999999999999999 9999999999865
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.01 E-value=2.5e-10 Score=65.90 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=38.6
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.++..+.++.+++|+++|+++|.+|. .|+||||+|+.+|
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~A~~~~ 46 (93)
T 1n0q_A 5 PLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG 46 (93)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC
Confidence 36778889999999999999999999999 9999999999875
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.00 E-value=2.8e-10 Score=78.14 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=40.7
Q ss_pred HHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 29 IDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 29 ~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
-..+..|++.|.++.|++||++|+|+|.++...|+||||+|+.+|
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g 70 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS 70 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcC
Confidence 445889999999999999999999999998746999999999875
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.98 E-value=3.7e-10 Score=73.25 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=24.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..|+..|..+.|++|+++|+|+|.+|. +|+||||+|+.+|
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g 114 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENG 114 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHcC
Confidence 4555556666666666666666666666 6666666666543
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.96 E-value=6.7e-10 Score=72.02 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=23.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
.+..|++.|.++.|+.||++|+|+|.+|. +|.||||+|+.+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~-~g~t~l~~a~~~ 47 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDS-DGRTPLHHAAEN 47 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHc
Confidence 35555556666666666666666666655 555555555544
No 7
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.89 E-value=1.1e-09 Score=65.68 Aligned_cols=42 Identities=21% Similarity=0.189 Sum_probs=35.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.+++|+++|+++|.+|. .|+||||+|+.+|
T Consensus 43 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 43 PLHYAADCGQLEILEFLLLKGADINAPDK-HHITPLLSAVYEG 84 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcC
Confidence 47778888888888888888888888888 8888888888764
No 8
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.85 E-value=2.9e-09 Score=63.50 Aligned_cols=42 Identities=19% Similarity=0.114 Sum_probs=35.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 60 pLh~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 60 PLHLAARNGHLEVVKLLLEAGADVXAQDK-FGKTAFDISIDNG 101 (110)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccc-CCCcHHHHHHHcC
Confidence 47778888888999999999999999888 8999999988765
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.83 E-value=3.3e-09 Score=63.57 Aligned_cols=43 Identities=19% Similarity=0.180 Sum_probs=40.2
Q ss_pred HHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 30 DETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 30 ~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
..+..|+..+.++.++.|++.|+++|.+|. .|+||||+|+.+|
T Consensus 9 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~ 51 (123)
T 3aaa_C 9 KEFMWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCG 51 (123)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCCT-TSSCHHHHHHHTT
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcCccCC-CCCcHHHHHHHcC
Confidence 568889999999999999999999999999 9999999999875
No 10
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.81 E-value=3.4e-09 Score=63.20 Aligned_cols=43 Identities=23% Similarity=0.250 Sum_probs=40.1
Q ss_pred HHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 30 DETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 30 ~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
..+..|+..+.++.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 26 t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~ 68 (110)
T 2zgd_A 26 KKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNG 68 (110)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC
Confidence 458899999999999999999999999999 9999999999875
No 11
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.81 E-value=4e-09 Score=64.34 Aligned_cols=42 Identities=21% Similarity=0.093 Sum_probs=35.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 50 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~ 91 (136)
T 2jab_A 50 PLYLATAHGHLEIVEVLLKNGADVNAVDA-IGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcC
Confidence 36778888888888888888888888888 8888888888764
No 12
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.79 E-value=4.2e-09 Score=64.77 Aligned_cols=42 Identities=24% Similarity=0.315 Sum_probs=32.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEG 112 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhC
Confidence 36677777888888888888888888888 8888888887654
No 13
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.77 E-value=4.9e-09 Score=69.58 Aligned_cols=40 Identities=18% Similarity=0.046 Sum_probs=23.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|.++.|++|+++|+++|.+|. .|+||||+|+.+
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~ 113 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAASC 113 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Confidence 4555555555555555555666655555 556666655544
No 14
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.76 E-value=5.3e-09 Score=65.10 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=33.5
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~ 122 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEELG 122 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TCCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhC
Confidence 56777778888888888888888888888 8888888887654
No 15
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.76 E-value=6.4e-09 Score=63.43 Aligned_cols=42 Identities=19% Similarity=0.058 Sum_probs=34.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+..+.|++|+++|+++|.+|. +|.||||+|+.+|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~tpl~~A~~~~ 124 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADVNAQDK-FGKTAFDISIGNG 124 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCcCC-CCCCHHHHHHHCC
Confidence 37777888888888888888888888888 8888888888764
No 16
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.76 E-value=6.1e-09 Score=67.55 Aligned_cols=42 Identities=17% Similarity=-0.016 Sum_probs=39.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.|++|+++|+|+|.+|. .|.||||+|+.+|
T Consensus 124 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 124 PLSFAACVGSEEIVRLLIEHGADIRAQDS-LGNTVLHILILQP 165 (232)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHTCS
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47888999999999999999999999999 9999999999865
No 17
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.75 E-value=6.9e-09 Score=63.96 Aligned_cols=41 Identities=17% Similarity=0.183 Sum_probs=30.9
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.+...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLHLAAKEG 114 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 6667777777777777777777777777 7777777777654
No 18
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.75 E-value=8.4e-09 Score=64.07 Aligned_cols=41 Identities=15% Similarity=-0.055 Sum_probs=27.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 119 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEAAAKG 119 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 5666666667777777777777777766 6777777766553
No 19
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.75 E-value=7.9e-09 Score=62.77 Aligned_cols=42 Identities=7% Similarity=-0.035 Sum_probs=36.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 46 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 46 PLHEACNHGHLKVVELLLQHKALVNTTGY-QNDSPLHDAAKNG 87 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCG-GGCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCcccCcCC-CCCCHHHHHHHcC
Confidence 47778888899999999999999999998 9999999998765
No 20
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.75 E-value=8.8e-09 Score=64.70 Aligned_cols=42 Identities=21% Similarity=0.167 Sum_probs=33.0
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+.++.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 50 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 50 PLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC
Confidence 36677778888888888888888888888 8888888887754
No 21
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.74 E-value=2.8e-09 Score=72.94 Aligned_cols=39 Identities=8% Similarity=-0.059 Sum_probs=19.6
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.|+..|.++.|++|+++|+|+|.+|. .|.||||+|++
T Consensus 189 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~ 227 (269)
T 4b93_B 189 LHEAVIEKHVFVVELLLLHGASVQVLNK-RQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCSGGGSCT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHh
Confidence 4444445555555555555555555555 55555555543
No 22
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.74 E-value=6.5e-09 Score=72.25 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=39.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|.++.|++|+++|+++|.+|. +|+||||+|+.+|
T Consensus 134 pLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~-~g~TpLh~A~~~g 175 (327)
T 1sw6_A 134 PLHWLTSIANLELVKHLVKHGSNRLYGDN-MGESCLVKAVKSV 175 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTBCCT-TCCCHHHHHHHSS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhc
Confidence 48899999999999999999999999999 9999999999864
No 23
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.73 E-value=7.8e-09 Score=63.04 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=21.6
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..+..+.+++|+++|+++|.+|. .|.||||+|+.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 121 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDA-WGRLPVDLAEEQ 121 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSS-SSSCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Confidence 4445555555555555555555555555 555555555543
No 24
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.72 E-value=8.3e-09 Score=71.12 Aligned_cols=40 Identities=23% Similarity=0.070 Sum_probs=21.0
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|..+.|++|+++|+|+|.+|. .|.||||+|+.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~ 248 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANE-SGETPLDIAKRL 248 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccC-CCCCHHHHHHHc
Confidence 4445555555555555555555555555 555555555543
No 25
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.72 E-value=2.6e-08 Score=65.67 Aligned_cols=42 Identities=17% Similarity=0.088 Sum_probs=38.8
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCC--------------CCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKD--------------PASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d--------------~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|.++.|++|+++|+++|.++ . .|.||||+|+.+|
T Consensus 96 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~-~g~tpL~~A~~~g 151 (260)
T 3jxi_A 96 ALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFY-FGELPLSLAACTN 151 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCC-SCSSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcCccccccccCccccccccc-CCCCHHHHHHHcC
Confidence 4788899999999999999999999999 6 8999999999875
No 26
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.72 E-value=1e-08 Score=67.68 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=38.5
Q ss_pred HHHhCchhccHHHHHHHHH---cCCCCCCCCCCCCchHHHHhhhc
Q psy1719 31 ETRAAPETRMLEDLAAEAA---RGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~---~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
.++.|+..+..+.|++|++ +|+++|.+|. .|+||||+|+.+
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~-~g~TpLh~A~~~ 186 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDS-RGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCC-CCCcHHHHHHHh
Confidence 4888999999999999999 9999999999 999999999964
No 27
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.71 E-value=8.5e-09 Score=62.87 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=37.0
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCC-CchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPAS-GATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~-G~TpLH~Aa~~~ 73 (73)
++.+.. +..+.+++|+++|+++|.+|. . |.||||+|+.+|
T Consensus 49 L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 49 IQVMMM-GSAQVAELLLLHGAEPNCADP-ATLTRPVHDAAREG 89 (136)
T ss_dssp TTTSTT-SCHHHHHHHHHHTCCSSCCBT-TTTBCHHHHHHHHT
T ss_pred HHHHHc-CCHHHHHHHHHCCCCCCCcCC-CCCCCHHHHHHHcC
Confidence 778888 999999999999999999999 8 999999999865
No 28
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.71 E-value=8.5e-09 Score=70.16 Aligned_cols=42 Identities=17% Similarity=0.088 Sum_probs=34.5
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|..+.|++|+++|+|+|.+|. .|.||||+|+.+|
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~~g 227 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTALMCACEHG 227 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCC
Confidence 36777788888888888888888888888 8888888888764
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.71 E-value=1.1e-08 Score=63.55 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=39.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 45 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 86 (165)
T 3twr_A 45 PLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHcC
Confidence 47888999999999999999999999999 9999999999875
No 30
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.71 E-value=7.6e-09 Score=67.75 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=35.0
Q ss_pred HHhCchhccH----HHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRML----EDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l----~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|...+.. +.|++|+++|+|+|.+|. .|+||||+|+.+|
T Consensus 42 Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 42 LYDVLRNNNDEARYKISMFLINKGADIKSRTK-EGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT-TCCCTHHHHHHHC
T ss_pred HHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcC
Confidence 6677777654 579999999999999998 9999999998764
No 31
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.71 E-value=7.3e-09 Score=62.93 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=27.4
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.|...+..+.+++|++.|+++|.+|. .|.||||+|+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~ 118 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNI-FGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCGGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHhh
Confidence 5666666777777777777777777777 77777777664
No 32
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.71 E-value=6.8e-09 Score=68.90 Aligned_cols=49 Identities=8% Similarity=-0.057 Sum_probs=41.6
Q ss_pred CCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 24 VTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 24 i~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+++.-...+..|+..|.++.|+.|++.|+++|.+|. .|.||||+|+.+|
T Consensus 33 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g 81 (239)
T 1ycs_B 33 FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAG 81 (239)
T ss_dssp ----CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHHT
T ss_pred cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 443335668999999999999999999999999999 9999999999875
No 33
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.71 E-value=1.1e-08 Score=63.22 Aligned_cols=40 Identities=15% Similarity=-0.007 Sum_probs=19.9
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|...+..+.+++|+++|+++|.+|. .|.||||+|+.+
T Consensus 71 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 110 (153)
T 1awc_B 71 LHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWATEH 110 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 4444444555555555555555555554 555555555443
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.71 E-value=1.1e-08 Score=67.45 Aligned_cols=41 Identities=22% Similarity=0.105 Sum_probs=31.7
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|++.+..+.|++|+++|+|+|.+|. .|.||||+|+.+|
T Consensus 196 L~~A~~~~~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLKAGADPTARMY-GGRTPLGSALLRP 236 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHTSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccc-CCCCHHHHHHHcC
Confidence 6667777788888888888888888887 7888888887654
No 35
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.70 E-value=1e-08 Score=64.71 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=25.4
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLHYACFWG 116 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC
Confidence 5555566666666666666666666666 6666666666543
No 36
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.70 E-value=5.7e-09 Score=61.73 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=34.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|+..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 46 L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 46 LHLAAKNGHAEIVKLLLAKGADVNARSK-DGNTPEHLAKKNG 86 (115)
T ss_dssp THHHHTTTCHHHHHHHTTTTCCTTCCCT-TCCCTTHHHHTTT
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHCC
Confidence 6677788888888888888888888888 8888888888764
No 37
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.69 E-value=1.3e-08 Score=64.95 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=20.4
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..+..+.|++|+++|+++|.++...|+||||+|+.+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 80 LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 44444455555555555555555555411555555555543
No 38
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.69 E-value=7.1e-09 Score=70.89 Aligned_cols=42 Identities=17% Similarity=0.026 Sum_probs=35.0
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|..+.|++|+++|+|+|.++. .|+||||+|+.+|
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~-~g~t~Lh~A~~~g 196 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINASNN-KGNTALHEAVIEK 196 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTCBCT-TSCBHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCcccc-CCCcHHHHHHHcC
Confidence 36777888888888888888888888888 8888888888765
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.69 E-value=5.7e-09 Score=72.55 Aligned_cols=42 Identities=19% Similarity=0.080 Sum_probs=38.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|++.|..+.|++|+++|+|+|.+|. .|.||||+|+.+|
T Consensus 286 pLh~A~~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~~g 327 (327)
T 1sw6_A 286 CLNIAARLGNISIVDALLDYGADPFIANK-SGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHTTCCTTCCCT-TSCCGGGGTCC--
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHhcC
Confidence 48889999999999999999999999999 9999999999875
No 40
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.68 E-value=1.5e-08 Score=67.76 Aligned_cols=42 Identities=14% Similarity=0.036 Sum_probs=35.1
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+.++.|++|+++|+++|.+|. .|+||||+|+.+|
T Consensus 57 pLh~A~~~g~~~~v~~Ll~~ga~~n~~d~-~g~tpLh~A~~~g 98 (229)
T 2vge_A 57 ALHNAICGANYSIVDFLITAGANVNSPDS-HGWTPLHCAASCN 98 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 36777888888888888888888888888 8888888888764
No 41
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.67 E-value=1.9e-08 Score=59.02 Aligned_cols=40 Identities=28% Similarity=0.261 Sum_probs=19.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..+...+..+.+++|+++|+++|.+|. .|.||||+|+.+
T Consensus 72 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 111 (126)
T 1n0r_A 72 LHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARN 111 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHc
Confidence 3444444455555555555555555554 555555555443
No 42
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.67 E-value=1.5e-08 Score=65.88 Aligned_cols=42 Identities=10% Similarity=-0.084 Sum_probs=31.9
Q ss_pred HHHhCchhccHHHHHHHHHc-CCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAAR-GQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~-Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+.++.|++|++. |+++|.+|. .|.||||+|+.+|
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~-~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 109 ALYWACHGGHKDIVEMLFTQPNIELNQQNK-LGDTALHAAAWKG 151 (222)
T ss_dssp HHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHcCCCCCccccCC-CCCCHHHHHHHcC
Confidence 36777777778888888777 788888777 7888888877654
No 43
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.67 E-value=1.7e-08 Score=62.26 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=39.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 103 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~ 144 (153)
T 1awc_B 103 ALHWATEHNHQEVVELLIKYGADVHTQSK-FCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcC
Confidence 47888899999999999999999999999 9999999999875
No 44
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.67 E-value=1.6e-08 Score=68.12 Aligned_cols=56 Identities=13% Similarity=0.058 Sum_probs=44.2
Q ss_pred HHHHHcCCCHHhH-----HHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 17 AEMAARGVTQALI-----DETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 17 ~~m~~~Gi~~~~~-----~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
..+-++|.+.... ..++.|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 231 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~-~g~t~L~~A~~~~ 291 (351)
T 3utm_A 231 ELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDS-LGQTALHRAALAG 291 (351)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 3444556553222 247888899999999999999999999999 9999999999865
No 45
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.67 E-value=1.6e-08 Score=69.67 Aligned_cols=42 Identities=12% Similarity=0.005 Sum_probs=39.2
Q ss_pred HHHhCchh---ccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPET---RMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~---~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+.. +.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 172 ~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~-~g~TpLh~A~~~g 216 (278)
T 1dcq_A 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG-KGSTALHYCCLTD 216 (278)
T ss_dssp HHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-TCCCHHHHHHHTT
T ss_pred cchHHHHhcccchHHHHHHHHHCCCCccccCC-CCCCHHHHHHHcC
Confidence 58888888 899999999999999999999 9999999999875
No 46
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.66 E-value=1.9e-08 Score=63.56 Aligned_cols=42 Identities=12% Similarity=-0.028 Sum_probs=36.0
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 42 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 42 PLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAASHG 83 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 37788888888999999999999998888 8999999988764
No 47
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.66 E-value=1.9e-08 Score=65.07 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=30.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQHGANVNAQMY-SGSSALHSASGRG 194 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 35666677777777777777777777777 7777777777654
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.66 E-value=1.1e-08 Score=64.92 Aligned_cols=31 Identities=23% Similarity=0.137 Sum_probs=15.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 41 LEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 41 l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
.+.+++|+++|+|+|.+|. .|.||||+|+.+
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 188 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDN-SGRTAMDYANQK 188 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCccCC-CCCCHHHHHHHc
Confidence 4445555555555555544 455555555443
No 49
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.66 E-value=3.3e-08 Score=68.41 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=32.5
Q ss_pred HHHhCchhc--cHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETR--MLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~--~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..| .++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 141 ~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~g 184 (364)
T 3ljn_A 141 ALHWCVGLGPEYLEMIKILVQLGASPTAKDK-ADETPLMRAMEFR 184 (364)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCchHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC
Confidence 466777777 78888888888888888887 8888888887654
No 50
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.66 E-value=6.8e-09 Score=61.38 Aligned_cols=42 Identities=17% Similarity=0.240 Sum_probs=38.7
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+.++.++.|+++|+++|.+|. .|.||||+|+.+|
T Consensus 12 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~ 53 (115)
T 2l6b_A 12 PLHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNG 53 (115)
T ss_dssp HHHHHHHHTCHHHHHHHTTTTCCSSCCCS-SSCCTTHHHHTTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 46778889999999999999999999999 9999999999865
No 51
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.65 E-value=1.9e-08 Score=67.35 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=23.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|..+.|++|+++|+++|.++...|+||||+|+.+
T Consensus 81 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 81 LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 45555555566666666666666555522556666665554
No 52
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.65 E-value=1.4e-08 Score=64.73 Aligned_cols=41 Identities=22% Similarity=0.111 Sum_probs=38.5
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
.++.|+..+..+.+++|+++|+++|.+|. .|.||||+|+..
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 153 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEVEDE-RGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcCCCC-CCCCHHHHHHHh
Confidence 47889999999999999999999999999 999999999875
No 53
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.65 E-value=2.9e-08 Score=58.23 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=39.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..+...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 38 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 38 PLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG 79 (126)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcC
Confidence 47888999999999999999999999999 9999999999875
No 54
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.64 E-value=1.9e-08 Score=67.15 Aligned_cols=44 Identities=18% Similarity=0.027 Sum_probs=40.9
Q ss_pred HHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 29 IDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 29 ~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
...+..|+..|.++.|+.|++.|+++|.+|. .|.||||+|+.+|
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~tpLh~A~~~g 65 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPSQPNE-EGITALHNAICGA 65 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTT
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 4568889999999999999999999999999 9999999999875
No 55
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.64 E-value=2.1e-08 Score=67.04 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=32.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~g 117 (299)
T 1s70_B 76 ALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcC
Confidence 36677777788888888888888888877 7888888887654
No 56
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.63 E-value=2.3e-08 Score=65.82 Aligned_cols=42 Identities=14% Similarity=0.034 Sum_probs=39.1
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 48 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~~ 89 (282)
T 1oy3_D 48 ALHLAAILGEASTVEKLYAAGAGVLVAER-GGHTALHLACRVR 89 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCCHHHHHTTTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47888999999999999999999999999 9999999999865
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.63 E-value=2.3e-08 Score=62.45 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=16.8
Q ss_pred HhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 33 RAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 33 r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
+.+...+..+.+++|+++|+++|.+|. .|.||||+|+.
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 111 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLLYAVR 111 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHH
Confidence 334444444444444444444444444 44444444443
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.63 E-value=2.4e-08 Score=62.07 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=19.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.+...+..+.+++|+++|+++|.+|. .|.||||+|+.+
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 112 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLLYAVHG 112 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHHHHHHc
Confidence 4444444555555555555555555554 555555555443
No 59
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.63 E-value=2.4e-08 Score=62.07 Aligned_cols=42 Identities=7% Similarity=-0.097 Sum_probs=38.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+.++.|++|+++|+++|.++. .|.||||+|+.+|
T Consensus 39 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 39 PLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 47888899999999999999999999999 9999999999865
No 60
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.62 E-value=3.6e-08 Score=60.50 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=36.9
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+.. +..+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 40 L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 40 LQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 566 778999999999999999999999 9999999999875
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.62 E-value=2.7e-08 Score=63.24 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=18.7
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.|...+..+.+++|+++|+++|.+|. .|.||||+|+.
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 143 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASK 143 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHH
Confidence 3444444444444444444444444444 44444444444
No 62
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.62 E-value=2e-08 Score=73.84 Aligned_cols=40 Identities=10% Similarity=-0.129 Sum_probs=21.5
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|..+.|++|+++|||+|.+|. +|.||||+|+.+
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 250 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNE-AGETALDIARKK 250 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCT-TCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 4555555555555555555555555555 555555555543
No 63
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.62 E-value=2.6e-08 Score=73.27 Aligned_cols=42 Identities=19% Similarity=0.134 Sum_probs=37.9
Q ss_pred HHHhC---chhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAA---PETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a---~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.| +..|.++.|++|+++|+|+|.+|. .|+||||+|+.+|
T Consensus 174 ~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~TpLh~A~~~g 218 (497)
T 3lvq_E 174 VLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTALHYAALYN 218 (497)
T ss_dssp HHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCHHHHHTTTT
T ss_pred HHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHcC
Confidence 35666 669999999999999999999999 9999999999875
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.61 E-value=3.1e-08 Score=61.87 Aligned_cols=42 Identities=10% Similarity=-0.132 Sum_probs=39.3
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+.++.|++|+++|+++|.++. .|.||||+|+.+|
T Consensus 39 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 39 PLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 47889999999999999999999999999 9999999999875
No 65
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.61 E-value=2.9e-08 Score=66.82 Aligned_cols=40 Identities=23% Similarity=0.252 Sum_probs=23.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|.++.|++|+++|+++|.+|. +|.||||+|+.+
T Consensus 62 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 101 (351)
T 3utm_A 62 LHLAAGYNRVRIVQLLLQHGADVHAKDK-GGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHC
Confidence 4555555555555555555555555555 555555555554
No 66
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.60 E-value=3.1e-08 Score=66.14 Aligned_cols=42 Identities=14% Similarity=-0.030 Sum_probs=37.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 39 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (261)
T 2xai_A 39 PLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 80 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47888899999999999999999999999 9999999998765
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.60 E-value=9.1e-08 Score=63.77 Aligned_cols=43 Identities=16% Similarity=0.082 Sum_probs=38.7
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCC-------------CCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDP-------------ASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~-------------~~G~TpLH~Aa~~~ 73 (73)
.+..|+..+.++.|++|+++|+++|.++. ..|.||||+|+.+|
T Consensus 104 pL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 104 ALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcC
Confidence 47888999999999999999999999986 26999999999875
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.60 E-value=3.8e-08 Score=61.73 Aligned_cols=41 Identities=24% Similarity=0.201 Sum_probs=27.5
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFG 124 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 5566666666677777777777776666 6677777766543
No 69
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.59 E-value=2.3e-08 Score=65.04 Aligned_cols=40 Identities=15% Similarity=-0.025 Sum_probs=22.9
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|.++.|+.|++.|+++|.+|. .|+||||+|+.+
T Consensus 77 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 116 (222)
T 3ehr_A 77 LHEAAKRGNLSWLRECLDNRVGVNGLDK-AGSTALYWACHG 116 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred cccccccCcHHHHHHHHhCCCCccccCC-CCCCHHHHHHHc
Confidence 4455555555555555555555555555 555555555554
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.59 E-value=3.9e-08 Score=64.88 Aligned_cols=42 Identities=21% Similarity=0.191 Sum_probs=38.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCC-------------CchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPAS-------------GATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~-------------G~TpLH~Aa~~~ 73 (73)
.++.|+..+.++.|++|+++|+++|.++. . |.||||+|+.+|
T Consensus 93 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~~~~~~~~~~~~~~g~tpL~~A~~~~ 147 (256)
T 2etb_A 93 ALHIAIEKRSLQCVKLLVENGADVHLRAC-GRFFQKHQGTCFYFGELPLSLAACTK 147 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCC-SGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccc-cccccccccccccCCCCHHHHHHHcC
Confidence 48889999999999999999999999998 6 999999999875
No 71
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.58 E-value=6e-08 Score=67.08 Aligned_cols=48 Identities=8% Similarity=0.124 Sum_probs=41.5
Q ss_pred CHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 25 TQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 25 ~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..-...+..|+..|.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g 64 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR-FGCTALHLACKFG 64 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCcHHHHHHHcC
Confidence 33445568899999999999999999999999999 9999999999875
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.58 E-value=3.7e-08 Score=65.71 Aligned_cols=42 Identities=17% Similarity=0.037 Sum_probs=39.0
Q ss_pred HHHhCchhccHHHHHHHHH---cCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAA---RGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~---~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.|++|++ +|+++|.+|. .|+||||+|+.+|
T Consensus 151 pL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 151 PLSLAACTNQLAIVKFLLQNSWQPADISARDS-VGNTVLHALVEVA 195 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCceeeCC-CCCcHHHHHHHcc
Confidence 4788999999999999999 9999999999 9999999999753
No 73
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.58 E-value=3.7e-08 Score=63.79 Aligned_cols=41 Identities=15% Similarity=-0.022 Sum_probs=29.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCC-----CCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDL-----EYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadv-----n~~d~~~G~TpLH~Aa~~~ 73 (73)
++.|+..|..+.|++|+++|+++ +.+|. .|.||||+|+.+|
T Consensus 41 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 41 LHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALHIAVINQ 86 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHHHHHHcC
Confidence 66677777777777777777776 66666 7777777777654
No 74
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.58 E-value=4.6e-08 Score=61.97 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+.++.|++|+++|+++|.++. .|.||||+|+.+|
T Consensus 42 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 83 (201)
T 3hra_A 42 PLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAGAQG 83 (201)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47778888888889999999999998888 8889999888764
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.58 E-value=5.7e-08 Score=59.76 Aligned_cols=40 Identities=18% Similarity=0.063 Sum_probs=35.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..+.. +..+.+++|+++|+++|.++. .|.||||+|+.+|
T Consensus 42 L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 42 LQVMKL-GNPEIARRLLLRGANPDLKDR-TGFAVIHDAARAG 81 (162)
T ss_dssp HHHCCS-SCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 566777 999999999999999999999 9999999999765
No 76
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.57 E-value=4.3e-08 Score=64.65 Aligned_cols=40 Identities=18% Similarity=0.027 Sum_probs=38.0
Q ss_pred HHHhCchhccHHHHHHHHH---cCCCCCCCCCCCCchHHHHhhh
Q psy1719 31 ETRAAPETRMLEDLAAEAA---RGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~---~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
.++.|+..+..+.|++|++ +|+|+|.+|. .|+||||+|+.
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~-~g~TpLh~A~~ 181 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDS-LGNTVLHALVM 181 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCcCccCC-CCCCHHHHHHH
Confidence 4788899999999999999 9999999999 99999999997
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.57 E-value=4.5e-08 Score=67.04 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=42.1
Q ss_pred HHHHHHHcCCCHHhH-----HHHHhCchhccHHHHHHHHHc-CCCCCCCCCCCCchHHHHhhhcC
Q psy1719 15 IEAEMAARGVTQALI-----DETRAAPETRMLEDLAAEAAR-GQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 15 ie~~m~~~Gi~~~~~-----~~~r~a~e~~~l~~v~~ll~~-Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
|...+-++|.++... ..++.+++.+..+.|+.|+.. |+++|.+|. +|.||||+|+++|
T Consensus 221 i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~-~G~TpL~~A~~~g 284 (337)
T 4g8k_A 221 ITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVELK 284 (337)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT-TSCBHHHHHHHTT
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC-CCCCHHHHHHHcC
Confidence 334445566553221 136778888888889888874 889999998 9999999998765
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.57 E-value=3.2e-08 Score=69.71 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=37.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 316 pL~~A~~~g~~~iv~~Ll~~gad~~~~d~-~g~t~l~~A~~~g 357 (373)
T 2fo1_E 316 PIMLAAQEGRIEVVMYLIQQGASVEAVDA-TDHTARQLAQANN 357 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCS-SSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccCCCC-CCCCHHHHHHHcC
Confidence 47778889999999999999999999999 9999999998765
No 79
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.57 E-value=7.4e-08 Score=62.22 Aligned_cols=65 Identities=12% Similarity=0.029 Sum_probs=49.2
Q ss_pred chhHHHHHHHHHHHcCCCHHhH-----HHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 8 AEAALDHIEAEMAARGVTQALI-----DETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~-----~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+.++..+|...+.+.|.+.... ..+..|...+..+.+++|+++|+++|.++. .|.||||+|+.+|
T Consensus 21 ~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 90 (241)
T 1k1a_A 21 NLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR-HGQTAAHLACEHR 90 (241)
T ss_dssp CHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcC
Confidence 3455555655555666543222 247888889999999999999999999999 9999999998765
No 80
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.57 E-value=2.3e-08 Score=70.53 Aligned_cols=42 Identities=14% Similarity=0.003 Sum_probs=29.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|.++.|++|+++|+++|.++. +|.||||+|+.+|
T Consensus 50 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g 91 (437)
T 1n11_A 50 PLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLHCAARIG 91 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCC
Confidence 46667777777777777777777777777 7777777777654
No 81
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.56 E-value=1.9e-08 Score=65.72 Aligned_cols=39 Identities=13% Similarity=0.025 Sum_probs=19.0
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
+..|...+..+.|++|+++|+++|.+|. .|.||||+|+.
T Consensus 155 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~ 193 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWG 193 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCSCCCCT-TCCCGGGGCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccC-CCCCHHHHHHc
Confidence 3444444444555555555555555444 45555555443
No 82
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.55 E-value=5.6e-08 Score=62.46 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=19.7
Q ss_pred HHhCchhccHHHHHHHHHcC-CCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARG-QDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~G-advn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|+..+..+.+++|++.| +++|.+|. .|.||||+|+.+
T Consensus 144 L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~-~g~t~L~~A~~~ 184 (228)
T 2dzn_A 144 LHRAASVGSLKLIELLCGLGKSAVNWQDK-QGWTPLFHALAE 184 (228)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCSCCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcCcccccCcCC-CCCCHHHHHHHc
Confidence 34444444555555555555 55555554 555555555443
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.55 E-value=4.6e-08 Score=60.77 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=35.1
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCch-HHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGAT-PSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~T-pLH~Aa~~~ 73 (73)
++.| ..+..+.|++|+++|+++|.+|. .|.| |||+|+.+|
T Consensus 49 L~~A-~~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 49 IQVM-MMGSARVAELLLLHGAEPNCADP-ATLTRPVHDAAREG 89 (156)
T ss_dssp TTSS-CTTCHHHHHHHHTTTCCCCCCCT-TTCCCHHHHHHHHT
T ss_pred HHHH-HcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHHCC
Confidence 4444 48999999999999999999999 9999 999999865
No 84
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.55 E-value=3.6e-08 Score=69.55 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=23.9
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..|+..+.++.|++|+++|+|+|.+|. .|.||||+|+.+|
T Consensus 315 L~~A~~~g~~~~v~~Ll~~gad~n~~~~-~g~t~L~~A~~~g 355 (437)
T 1n11_A 315 LHVASHYGNIKLVKFLLQHQADVNAKTK-LGYSPLHQAAQQG 355 (437)
T ss_dssp HHHHHHSSCSHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHCC
Confidence 4555555566666666666666666665 6666666665543
No 85
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.54 E-value=6.1e-08 Score=63.25 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=38.7
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.|++|+++|+++|.++...|.||||+|+.+|
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 4788889999999999999999999998658999999999875
No 86
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.54 E-value=5.5e-08 Score=64.53 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=20.7
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~ 200 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAARE 200 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHC
Confidence 4444445555555555555555555555 555555555443
No 87
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.54 E-value=5.2e-08 Score=67.91 Aligned_cols=39 Identities=10% Similarity=-0.115 Sum_probs=19.8
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.|+..+..+.|++|+++|+|+|.+|. +|.||||+|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~ 268 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNE-AGETALDIARK 268 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCT-TSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 4444445555555555555555555555 55555555544
No 88
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.54 E-value=6.6e-08 Score=62.40 Aligned_cols=41 Identities=15% Similarity=0.038 Sum_probs=26.4
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..+...+.++.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 183 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKASTNIQDT-EGNTPLHLACDEE 183 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHhcCCCccccCC-CCCCHHHHHHHCC
Confidence 5555666666666666666666666666 6666666666543
No 89
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.53 E-value=6.8e-08 Score=61.37 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=39.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 137 PLIVASKYGRSEIVKKLLELGADISARDL-TGLTAEASARIFG 178 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhC
Confidence 47888899999999999999999999999 9999999999875
No 90
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.53 E-value=4.8e-08 Score=66.55 Aligned_cols=42 Identities=14% Similarity=-0.029 Sum_probs=31.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..|.++.|++|+++|+++|.+|. .|+||||+|+.+|
T Consensus 65 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~g 106 (285)
T 3kea_A 65 PLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYYAVDSG 106 (285)
T ss_dssp HHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHHHHHHcC
Confidence 46677777777777777777888877777 7788888777654
No 91
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.52 E-value=7e-08 Score=61.98 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=21.1
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|...+..+.+++|+++|+++|.+|. .|.||||+|+.+
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 168 (223)
T 2f8y_A 129 LHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAARE 168 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCcCHHHHHHHc
Confidence 4444455555555555555555555555 555555555543
No 92
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.52 E-value=6.6e-08 Score=70.04 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=30.6
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+..+.++.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 238 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~-~G~TpLh~A~~~g 279 (368)
T 3jue_A 238 PLIQATAANSLLACEFLLQNGANVNQADS-AGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 36667777777777777777777777777 7777777777654
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.52 E-value=5.7e-08 Score=65.00 Aligned_cols=40 Identities=23% Similarity=0.120 Sum_probs=37.9
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
.++.|+..+..+.|++|+++|+++|.+|. .|.||||+|+.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~ 153 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVEDE-RGLTALELARE 153 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 48889999999999999999999999999 99999999985
No 94
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.51 E-value=8.8e-08 Score=62.59 Aligned_cols=40 Identities=18% Similarity=0.100 Sum_probs=23.2
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|...|..+.|++|+++|+++|.+|. .|.||||+|+.+
T Consensus 43 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 82 (285)
T 1wdy_A 43 LHNAVQMSREDIVELLLRHGADPVLRKK-NGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHc
Confidence 4555555555556666655666555555 555666655544
No 95
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.51 E-value=7.8e-08 Score=62.06 Aligned_cols=40 Identities=18% Similarity=0.001 Sum_probs=23.6
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|...|.++.|++|+++|+++|.+|. .|.||||+|+.+
T Consensus 44 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 83 (231)
T 3aji_A 44 LHWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASA 83 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHc
Confidence 4555555566666666666666666665 566666666554
No 96
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.51 E-value=8.7e-08 Score=61.54 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=23.5
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|+..|.++.|++|+++|+++|.+|. .|.||||+|+.+
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 68 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSA 68 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 4555555566666666666666666655 566666666554
No 97
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.51 E-value=7.6e-08 Score=64.25 Aligned_cols=40 Identities=10% Similarity=-0.020 Sum_probs=21.5
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.|+..|.++.|+.|+++|+++|.+|. +|.||||+|+.+
T Consensus 7 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 46 (261)
T 2xai_A 7 MHEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLG 46 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHc
Confidence 4444555555555555555555555555 555555555543
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.51 E-value=7.2e-08 Score=67.16 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=38.0
Q ss_pred HHHhCchh---ccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPET---RMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~---~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|+.. +.++.|++|++.|+++|.+|. .|.||||+|+.+|
T Consensus 193 ~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~TpLh~A~~~g 237 (301)
T 2b0o_E 193 VLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTALHYAALYN 237 (301)
T ss_dssp HHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47777765 899999999999999999999 9999999999875
No 99
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.50 E-value=8.1e-08 Score=63.69 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=37.2
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 60 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 101 (253)
T 1yyh_A 60 ALHLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSAD 101 (253)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 47888889999999999999999999998 9999999998764
No 100
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.50 E-value=8.6e-08 Score=61.60 Aligned_cols=42 Identities=14% Similarity=0.040 Sum_probs=34.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..+...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHRAASVG 151 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHhHHHHHHHcCCCccccCC-CCCCHHHHHHHcC
Confidence 36677788888888888888888888888 8888888888764
No 101
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.49 E-value=6.8e-08 Score=65.66 Aligned_cols=41 Identities=15% Similarity=-0.027 Sum_probs=27.1
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+..|+..|..+.|++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 96 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 96 LHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 136 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHT
T ss_pred HHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 5566666666666666666666666666 6666666666543
No 102
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.49 E-value=6e-08 Score=62.10 Aligned_cols=41 Identities=12% Similarity=0.013 Sum_probs=24.3
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..|...+.++.|++|+++|++++..+...|.||||+|+.+
T Consensus 46 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 46 LHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 55555666666666666666666655442466666666654
No 103
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.49 E-value=9.7e-08 Score=61.84 Aligned_cols=40 Identities=18% Similarity=0.015 Sum_probs=20.5
Q ss_pred HHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 32 TRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 32 ~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
+..+...+..+.+++|++.|+++|.+|. .|.||||+|+.+
T Consensus 148 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 187 (237)
T 3b7b_A 148 LHWAAFSGCVDIAEILLAAKCDLHAVNI-HGDSPLHIAARE 187 (237)
T ss_dssp HHHHHHHCCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHh
Confidence 3444445555555555555555555555 555555555443
No 104
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.49 E-value=1.1e-07 Score=61.58 Aligned_cols=42 Identities=21% Similarity=0.123 Sum_probs=36.1
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+.++.|++|+++|+++|.++. .|.||||+|+.+|
T Consensus 47 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 47 PLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLHLAAKKG 88 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcC
Confidence 47788888899999999999999998888 8999999988765
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.48 E-value=1.1e-07 Score=60.87 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=39.0
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|...+..+.+++|+++|+++|.+|. .|.||||+|+.+|
T Consensus 180 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 180 ALHWAVLAGNTTVISLLLEAGANVDAQNI-KGESALDLAKQRK 221 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCBCT-TSCBHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 47888899999999999999999999999 9999999999875
No 106
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.47 E-value=9.7e-08 Score=62.42 Aligned_cols=35 Identities=23% Similarity=0.094 Sum_probs=28.2
Q ss_pred hccHHHHHHHHH-cCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 38 TRMLEDLAAEAA-RGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 38 ~~~l~~v~~ll~-~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..+.+++|++ +|+|+|.+|. .|.||||+|+.+|
T Consensus 130 ~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 130 NEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVKRCQ 165 (186)
T ss_dssp HHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHHTTT
T ss_pred hhHHHHHHHHHHhcCCCCcccCC-CCCCHHHHHHHcC
Confidence 455667888888 8888888888 8888888888765
No 107
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.43 E-value=1.3e-07 Score=64.19 Aligned_cols=42 Identities=21% Similarity=0.081 Sum_probs=39.2
Q ss_pred HHHhCchhccHHHHHHHHH-cCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAA-RGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~-~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|..+.|++|++ .|+|+|.+|. .|.||||+|+.+|
T Consensus 219 pLh~A~~~g~~~iv~~Ll~~~gad~~~~d~-~g~TpL~~A~~~g 261 (276)
T 4hbd_A 219 ALMCACEHGHKEIAGLLLAVPSCDISLTDR-DGSTALMVALDAG 261 (276)
T ss_dssp HHHHHHHHTCHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHhcCCCCCcCcCC-CCCCHHHHHHHcC
Confidence 4788899999999999999 8999999999 9999999999875
No 108
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.42 E-value=1.9e-07 Score=61.00 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=33.2
Q ss_pred HHHhCchhccHHHHHHHHH-cCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAA-RGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~-~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|.+.+.++.|++|++ .|+++|.+|. .|.||||+|+.+|
T Consensus 222 ~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~-~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 222 PLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVELK 264 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHSSSCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHhccCCCccccCC-CCCcHHHHHHHcC
Confidence 3667777888888888887 7888888888 8888888887754
No 109
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.36 E-value=2.9e-07 Score=62.55 Aligned_cols=42 Identities=10% Similarity=-0.032 Sum_probs=36.8
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|.++.|+.|++.|+++|.+|. +|.||||+|+.+|
T Consensus 62 ~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g 103 (285)
T 3d9h_A 62 PMHEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGG 103 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCEECT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHCC
Confidence 47888889999999999999999999998 9999999998765
No 110
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.34 E-value=1.9e-07 Score=63.58 Aligned_cols=44 Identities=5% Similarity=-0.090 Sum_probs=39.4
Q ss_pred HHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchH-HHHhhhcC
Q psy1719 29 IDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATP-SVNGLRYK 73 (73)
Q Consensus 29 ~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~Tp-LH~Aa~~~ 73 (73)
...++.|+..+..+.|++|+++|+|+|.+|. .|.|| ||+|+.+|
T Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~-~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 162 LSCIHITIKNGHVDMMILLLDYMTSTNTNNS-LLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCTTCC-CBCCTTHHHHHHHT
T ss_pred ccHHHHHHHcChHHHHHHHHHcCCCCCcccC-CCCChHHHHHHHcC
Confidence 4668889999999999999999999999999 99998 99998765
No 111
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.32 E-value=4.3e-07 Score=63.92 Aligned_cols=42 Identities=14% Similarity=-0.036 Sum_probs=38.6
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.+..|+..|..+.|++|+++|+++|.++. .|.||||+|+.+|
T Consensus 169 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g 210 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMKAGADPTIYNK-SERSALHQAAANR 210 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHCC
Confidence 37888999999999999999999999999 9999999999865
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.28 E-value=5.3e-07 Score=65.25 Aligned_cols=42 Identities=19% Similarity=0.126 Sum_probs=39.4
Q ss_pred HHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 31 ETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 31 ~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
.++.|...+..+.|++|+++|+++|.+|. .|.||||+|+..|
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad~~~~d~-~G~TpL~~A~~~g 312 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGADLGARDS-EGRDPLTIAMETA 312 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHHCcCCCCCcCC-CCCCHHHHHHHCC
Confidence 48889999999999999999999999999 9999999999865
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.16 E-value=3e-07 Score=66.63 Aligned_cols=44 Identities=11% Similarity=-0.117 Sum_probs=38.7
Q ss_pred HHHHHhCchhccHHHHHHHHHcCCCCCC--CCCCCCchHHHHhh-hcC
Q psy1719 29 IDETRAAPETRMLEDLAAEAARGQDLEY--KDPASGATPSVNGL-RYK 73 (73)
Q Consensus 29 ~~~~r~a~e~~~l~~v~~ll~~Gadvn~--~d~~~G~TpLH~Aa-~~~ 73 (73)
...++.|+..|.++.|++|+++|++++. +|. .|.||||+|+ .+|
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa~~~G 210 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAAVGRG 210 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHHSTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHHHHCC
Confidence 3468889999999999999999999988 888 8999999999 765
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=97.71 E-value=1.5e-05 Score=57.69 Aligned_cols=51 Identities=8% Similarity=-0.154 Sum_probs=26.8
Q ss_pred HHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCC---CCCCCCCCchHHHHhhhcC
Q psy1719 20 AARGVTQALIDETRAAPETRMLEDLAAEAARGQDL---EYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 20 ~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadv---n~~d~~~G~TpLH~Aa~~~ 73 (73)
.++|++. ...++.|+..|.++.|++|+++|++. +..+. .|.||||+|+.+|
T Consensus 86 ~~~g~~~--~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~-~~~tpL~~Aa~~G 139 (376)
T 2aja_A 86 HKKGIKS--EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQAFRLAAENG 139 (376)
T ss_dssp HHHTCCH--HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH-HHHHHHHHHHHTT
T ss_pred HHcCCCc--CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc-CCCCHHHHHHHcC
Confidence 3445553 24466666666666666666666622 22334 5556666666654
No 115
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=82.74 E-value=2 Score=24.81 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcC-CCHHhHHHHHhCchhccHHHHHHHHHcCC
Q psy1719 11 ALDHIEAEMAARG-VTQALIDETRAAPETRMLEDLAAEAARGQ 52 (73)
Q Consensus 11 ~~~~ie~~m~~~G-i~~~~~~~~r~a~e~~~l~~v~~ll~~Ga 52 (73)
++..|.+.++++| ++..++.+.....+...-.|+..|.+.|.
T Consensus 3 ~L~~Il~~L~~~g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~ 45 (78)
T 1xn7_A 3 SLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGK 45 (78)
T ss_dssp CHHHHHHHHHHSCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCC
Confidence 5778888999888 99999999999999999999999999984
No 116
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=76.79 E-value=1.9 Score=25.56 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcC-CCHHhHHHHHhCchhccHHHHHHHHHcCCCC
Q psy1719 11 ALDHIEAEMAARG-VTQALIDETRAAPETRMLEDLAAEAARGQDL 54 (73)
Q Consensus 11 ~~~~ie~~m~~~G-i~~~~~~~~r~a~e~~~l~~v~~ll~~Gadv 54 (73)
++..|.+.++++| ++..++.+.....+...-.|+..|.+.|.=.
T Consensus 3 ~L~~Il~~L~~~g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~ 47 (87)
T 2k02_A 3 SLMEVRDMLALQGRMEAKQLSARLQTPQPLIDAMLERMEAMGKVV 47 (87)
T ss_dssp CTHHHHHHHHHSCSEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSE
T ss_pred hHHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 4677888888888 8988899999999999999999999999533
No 117
>3iuo_A ATP-dependent DNA helicase RECQ; C-terminal, GI PSI, MCSG, structural genomics, midwest center for structur genomics; 1.60A {Porphyromonas gingivalis}
Probab=68.90 E-value=9 Score=23.38 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=34.6
Q ss_pred HHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCC
Q psy1719 17 AEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEY 56 (73)
Q Consensus 17 ~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~ 56 (73)
-++-++|.+.++|...|.......+.-+..++..|-.+|.
T Consensus 26 ~~l~~~G~sleeIA~~R~L~~~TI~~Hl~~~v~~G~~l~i 65 (122)
T 3iuo_A 26 VQQIDRKVALDDIAVSHGLDFPELLSEVETIVYSGTRINI 65 (122)
T ss_dssp HHHHHTTCCHHHHHHHTTCCHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHcCCCHHHHHHHcCCCHHHHHHHHHHHHHcCCccCH
Confidence 3456799999999999999999999999999999975653
No 118
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=68.18 E-value=4.1 Score=31.48 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=37.4
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.||.+.++.+...++...+.....-+..|..||. . .++.+||+|-|
T Consensus 57 k~~i~~~~~~~l~~la~~~~l~~~~~~mf~G~~iN~--t-E~R~vlH~alR 104 (557)
T 2cxn_A 57 KNLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINY--T-EDRAVLHVALR 104 (557)
T ss_dssp TSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBT--T-TTBCCCHHHHT
T ss_pred CCCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCC--C-CCcchhHHHHh
Confidence 466888888888777777776666666779999994 3 56789999987
No 119
>1y0n_A Hypothetical UPF0270 protein PA3463; MCSG, midwest center for structural genomics, protein struct initiative, PSI, structural genomics; 2.00A {Pseudomonas aeruginosa} SCOP: d.291.1.1
Probab=65.38 E-value=8.3 Score=22.69 Aligned_cols=47 Identities=21% Similarity=0.324 Sum_probs=31.1
Q ss_pred CccccccchhHHHHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCC
Q psy1719 1 MPYDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQ 52 (73)
Q Consensus 1 mp~Diaede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Ga 52 (73)
+||+-=..+...++|+.++-+.|-+ ..+ ...-..-.+.|+.-|++|-
T Consensus 5 IP~~~L~~eTL~nLIeefv~RegtD---yg~--E~sL~~kv~qv~~qL~~Ge 51 (78)
T 1y0n_A 5 IPHDLLEADTLNNLLEDFVTREGTD---NGD--ETPLDVRVERARHALRRGE 51 (78)
T ss_dssp CCGGGSCHHHHHHHHHHHHHCC------------CCHHHHHHHHHHHHHTTS
T ss_pred cChHhCCHHHHHHHHHHHHhccccc---ccc--cccHHHHHHHHHHHHHcCC
Confidence 5888777888889999999999988 333 4444445666777788874
No 120
>3dfg_A Xcrecx, regulatory protein RECX; RECX RECA, homologous recombination, tandem repeats, three-helix bundle, cytoplasm; 1.50A {Xanthomonas campestris PV}
Probab=64.90 E-value=10 Score=24.12 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHHH
Q psy1719 13 DHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAA 49 (73)
Q Consensus 13 ~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~ 49 (73)
..|..++.++||+.+.++++....+....+.+..++.
T Consensus 85 ~~I~~eL~~KGI~~~~I~~al~~~~~de~e~a~~l~~ 121 (162)
T 3dfg_A 85 LHIRAELGTHGLDSDAVSAAMATFEGDWTENALDLIR 121 (162)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCcHhHHHHHHHHHH
Confidence 4678889999999998888776554445555555554
No 121
>1yqf_A Hypothetical protein LMAJ011689; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.30A {Leishmania major} SCOP: d.25.1.1
Probab=64.66 E-value=11 Score=25.15 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=22.7
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHHh
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETRA 34 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r~ 34 (73)
|+...+.+.++++.|||+.+..+-+..
T Consensus 155 De~Lq~~l~~YLeeRGI~~~la~fl~~ 181 (203)
T 1yqf_A 155 DYDLLNCVMTYLEKRGVDEKLGEFVVL 181 (203)
T ss_dssp BHHHHHHHHHHHHHTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 889999999999999999776665543
No 122
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=64.49 E-value=4.3 Score=31.30 Aligned_cols=47 Identities=17% Similarity=0.134 Sum_probs=37.1
Q ss_pred cCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 22 RGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 22 ~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
+.|+.+.++.+...++...+.....-+..|..||. . .++.+||+|-|
T Consensus 52 ~~i~~~~~~~l~~la~~~~l~~~~~~mf~G~~iN~--t-E~R~vlH~alR 98 (549)
T 2wu8_A 52 HRVTRETLALLIDLARTAHLEERRDQMFAGVHINT--S-EDRAVLHTALR 98 (549)
T ss_dssp SSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBT--T-TTBCCCGGGGG
T ss_pred CCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCC--C-CCccceeeeee
Confidence 67888888888877777766666666679999994 4 56789999987
No 123
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=63.87 E-value=5.1 Score=31.33 Aligned_cols=48 Identities=19% Similarity=0.176 Sum_probs=37.9
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
++.||.+.++.+...++...+.....-+..|..||. . .++.+||+|-|
T Consensus 104 k~~i~~~~~~~L~~la~~~~l~~~~~~mf~G~~iN~--t-E~R~vlH~alR 151 (605)
T 1t10_A 104 KSHINDEIKDALVALAEERGVRAFAKAMFDGQRVNS--T-ENRAVLHVALR 151 (605)
T ss_dssp SSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBT--T-TTBCCCHHHHT
T ss_pred CCCCCHHHHHHHHHHHHhcChHHHHHHHhCCCCCCC--C-CCcchhhHhhh
Confidence 356888888888887777777777777789999994 3 56789999987
No 124
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=63.84 E-value=5 Score=31.44 Aligned_cols=47 Identities=13% Similarity=0.132 Sum_probs=37.5
Q ss_pred cCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhh
Q psy1719 22 RGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLR 71 (73)
Q Consensus 22 ~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~ 71 (73)
+.|+.+.++.+...++...+.....-+..|..||. . .++.+||+|-|
T Consensus 106 ~~i~~~~l~~L~~la~~~~l~~~~~~mf~G~~iN~--t-E~R~vlH~aLR 152 (613)
T 2o2c_A 106 SHINDEIKCALLRLAEERGIRQFVQSVFRGERVNT--T-ENRPVLHIALR 152 (613)
T ss_dssp SSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBT--T-TTBCCCHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCC--C-CCCccccHhhc
Confidence 45888888888888877777777777789999994 3 56789999987
No 125
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=63.48 E-value=4.9 Score=23.29 Aligned_cols=23 Identities=22% Similarity=0.205 Sum_probs=18.1
Q ss_pred HHHHHHHHcCCCHHhHHHHHhCc
Q psy1719 14 HIEAEMAARGVTQALIDETRAAP 36 (73)
Q Consensus 14 ~ie~~m~~~Gi~~~~~~~~r~a~ 36 (73)
-=..+++.+|+|+++|+++...+
T Consensus 37 ~K~~FL~sKGLt~eEI~~Al~ra 59 (70)
T 2w84_A 37 TRRAFLKKKGLTDEEIDMAFQQS 59 (70)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHc
Confidence 34578899999999999876544
No 126
>3jv1_A P22 protein; MAM33 family, hydrolase; 2.00A {Trypanosoma brucei} SCOP: d.25.1.0
Probab=59.84 E-value=13 Score=24.36 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=22.1
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHH
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETR 33 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r 33 (73)
|+...+.+.++++.|||+.+...-+.
T Consensus 134 De~Lq~~l~~yLeeRGI~~~la~fl~ 159 (182)
T 3jv1_A 134 EDHLVDSFTSYLSARGVNDTLANFID 159 (182)
T ss_dssp CHHHHHHHHHHHHTTTCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 78899999999999999977666553
No 127
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=59.57 E-value=6.9 Score=21.51 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=16.7
Q ss_pred HHHHHHHHcCCCHHhHHHHHh
Q psy1719 14 HIEAEMAARGVTQALIDETRA 34 (73)
Q Consensus 14 ~ie~~m~~~Gi~~~~~~~~r~ 34 (73)
-=..+++.+|+|+++|+.+..
T Consensus 32 ~K~~FL~sKGLt~~EI~~Al~ 52 (54)
T 3ff5_A 32 TRRAFLKKKGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 345688999999999998653
No 128
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=56.41 E-value=12 Score=23.54 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=22.2
Q ss_pred HHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHH
Q psy1719 13 DHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEA 48 (73)
Q Consensus 13 ~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll 48 (73)
..|..++.++||+.+.++++....+....+.+..++
T Consensus 83 ~~I~~eL~~KGI~~~~i~~al~~~~~d~~~~a~~l~ 118 (159)
T 3c1d_A 83 ARIRQELNQKGISREATEKAMREADIDWAALARDQA 118 (159)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCHhHHHHHHHHH
Confidence 357788888999988888765433323333343443
No 129
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=55.82 E-value=21 Score=20.26 Aligned_cols=45 Identities=11% Similarity=0.032 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHc-C--CCHHhHHHHHhCchhccHHHHHHHHHcCCC
Q psy1719 9 EAALDHIEAEMAAR-G--VTQALIDETRAAPETRMLEDLAAEAARGQD 53 (73)
Q Consensus 9 e~~~~~ie~~m~~~-G--i~~~~~~~~r~a~e~~~l~~v~~ll~~Gad 53 (73)
...+++|..+++++ | ++..++.+........--.+++.|-+.|.=
T Consensus 7 ~~IL~~I~~~i~~~~g~~psv~EIa~~lgvS~~TVrr~L~~Le~kG~I 54 (77)
T 2jt1_A 7 TKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVL 54 (77)
T ss_dssp HHHHHHHHHHHHHHTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHhhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcE
Confidence 35678888888886 4 577778888888788888889999888853
No 130
>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} SCOP: d.25.1.1 PDB: 3rpx_A
Probab=55.26 E-value=16 Score=24.20 Aligned_cols=42 Identities=31% Similarity=0.321 Sum_probs=31.0
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHHhC-------chhccHHHHHHHHH
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETRAA-------PETRMLEDLAAEAA 49 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r~a-------~e~~~l~~v~~ll~ 49 (73)
|+..-+.+.++++.|||+.+...-+..- .--..|..|+.+++
T Consensus 159 De~Lq~~l~~yLeeRGI~~~la~fl~~y~~~KE~~eYi~WL~~lk~Fv~ 207 (209)
T 1p32_A 159 DWALYDHLMDFLADRGVDNTFADELVELSTALEHQEYITFLEDLKSFVK 207 (209)
T ss_dssp CHHHHHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7889999999999999997766655332 22466677776665
No 131
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=54.06 E-value=9.7 Score=29.46 Aligned_cols=49 Identities=12% Similarity=0.044 Sum_probs=39.1
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.||.+.++.+...++...+.....-+-+|.-+|. . .++..||+|.|.
T Consensus 58 k~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~--t-E~R~vlH~aLR~ 106 (553)
T 4em6_D 58 KCRVNDETMALLKELAVAADVEGRRAAMFAGEHINN--T-EDRAVLHVALRD 106 (553)
T ss_dssp TSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBT--T-TTBCCCGGGGGC
T ss_pred CCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCcCC--C-CCchhhhHHhcC
Confidence 477888888888877777777777777899999995 3 677889999874
No 132
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=54.04 E-value=5.7 Score=22.47 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=23.4
Q ss_pred CCCHHhHHHHHhCchhccHHHHHHHHHcCCCCC
Q psy1719 23 GVTQALIDETRAAPETRMLEDLAAEAARGQDLE 55 (73)
Q Consensus 23 Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn 55 (73)
.|+.+.+..+|...--+|++.=+.|.+.+.|++
T Consensus 7 ~it~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~ 39 (64)
T 2cp9_A 7 GSSKELLMKLRRKTGYSFVNCKKALETCGGDLK 39 (64)
T ss_dssp CCCCHHHHHHHHHHCCCHHHHHHHHHHHTSCHH
T ss_pred cCCHHHHHHHHHHhCCCHHHHHHHHHHcCCCHH
Confidence 466677777777777777777777777766654
No 133
>3fyr_A Sporulation inhibitor SDA; helical hairpin, histidine kinase inhibitor, sporulation regulation, alternative initiation; 1.97A {Bacillus subtilis} SCOP: a.2.12.1 PDB: 1pv0_A 3d36_C*
Probab=52.69 E-value=6.7 Score=21.13 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=15.8
Q ss_pred cchhHHHHHHHHHHHcCCCH
Q psy1719 7 EAEAALDHIEAEMAARGVTQ 26 (73)
Q Consensus 7 ede~~~~~ie~~m~~~Gi~~ 26 (73)
-+.+-.++|+++|++||+.+
T Consensus 23 L~~dFI~LL~~Ei~RR~L~~ 42 (48)
T 3fyr_A 23 LNRDFIELIENEIKRRSLGH 42 (48)
T ss_dssp CCHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHcCCcc
Confidence 36788899999999999874
No 134
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=52.61 E-value=10 Score=29.32 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=39.3
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.||.+.++.+...++...+.....-+-+|.-+|. . .++..||+|.|.
T Consensus 48 k~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~--t-E~R~vlH~aLR~ 96 (543)
T 3ljk_A 48 KNLINDYILKSLLESAEKSSLKDKIKQMFNGAKINS--T-EHRAVLHTALRD 96 (543)
T ss_dssp TSSCCHHHHHHHHHHHHHSSHHHHHHHHHHTCCCBT--T-TTBCCCGGGGGC
T ss_pred CCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCcCC--C-CCcceeehhhcC
Confidence 477888888888887887777777777899999995 3 677889999874
No 135
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=52.31 E-value=32 Score=21.90 Aligned_cols=45 Identities=20% Similarity=0.093 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHcC--CCHHhHHHHHhCchhccHHHHHHHHHcCCC
Q psy1719 9 EAALDHIEAEMAARG--VTQALIDETRAAPETRMLEDLAAEAARGQD 53 (73)
Q Consensus 9 e~~~~~ie~~m~~~G--i~~~~~~~~r~a~e~~~l~~v~~ll~~Gad 53 (73)
...+++|.+.++++| .|..++.+........--..++.|-+.|.=
T Consensus 8 ~~il~~I~~~~~~~g~~~s~~eia~~lgl~~~tv~~~l~~Le~~G~i 54 (196)
T 3k2z_A 8 RKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALLHLIALEKKGYI 54 (196)
T ss_dssp HHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHcCCCcHHHHHHHHHHHHCCCE
Confidence 468899999999998 687788877777776666778888888863
No 136
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=51.32 E-value=10 Score=20.46 Aligned_cols=30 Identities=10% Similarity=0.054 Sum_probs=22.2
Q ss_pred ccchhHHHHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 6 CEAEAALDHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 6 aede~~~~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
.........|...+.++|+||.++...-..
T Consensus 8 ~~~~~l~~~l~~~r~~~gltq~~lA~~~gv 37 (80)
T 3kz3_A 8 EDARRLKAIWEKKKNELGLSYESVADKMGM 37 (80)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhCc
Confidence 334566788999999999998777665443
No 137
>3hjb_A Glucose-6-phosphate isomerase; PGI, IDP01329, gluconeogenesi glycolysis, structural genomics, center for STRU genomics of infectious diseases; HET: PG4; 1.50A {Vibrio cholerae} PDB: 3nbu_A
Probab=48.18 E-value=13 Score=28.93 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=37.2
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.||.+.++.+...++...+.....-+-+|.-+|. . .++..||+|.|.
T Consensus 80 k~~i~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~--t-E~R~vlH~aLR~ 128 (574)
T 3hjb_A 80 KNLVNAETMQHLFALAKETDLQSAITAMFKGEAINQ--T-EDRAVLHTALRN 128 (574)
T ss_dssp SSSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBT--T-TTBCCCHHHHTC
T ss_pred CCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCCCC--C-CCcceeeHHhhC
Confidence 466888888887777776666666667789999995 3 567889999874
No 138
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=47.43 E-value=25 Score=22.59 Aligned_cols=23 Identities=9% Similarity=0.345 Sum_probs=18.4
Q ss_pred HHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 13 DHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 13 ~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
..|..++.++||+.+.++++...
T Consensus 87 ~~I~~eL~~KGI~~~~I~~al~~ 109 (177)
T 3e3v_A 87 KVIKLNLSKKGIDDNIAEDALIL 109 (177)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHh
Confidence 46788899999999888887654
No 139
>3ujh_A Glucose-6-phosphate isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: G6Q; 2.10A {Toxoplasma gondii}
Probab=46.68 E-value=13 Score=28.78 Aligned_cols=49 Identities=10% Similarity=0.133 Sum_probs=36.9
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.||.+.++.+...++...+..-..-+-+|.-+|. . .++..||+|.|.
T Consensus 58 k~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~--t-E~R~vlH~aLR~ 106 (567)
T 3ujh_A 58 RQKITLETLQHLVNLAHERQVPAMVKRMFSGEKINQ--T-ENRAVLHVALRM 106 (567)
T ss_dssp ESSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBT--T-TTBCCCGGGGGC
T ss_pred cCcCCHHHHHHHHHHHHhCCcHHHHHHHhCCCCcCC--C-CCcccccHHHhC
Confidence 466777777777777777666666667789999995 3 567889999874
No 140
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=45.76 E-value=22 Score=20.80 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=23.1
Q ss_pred HHHHHHHHHHcCCCHHhHHHHHhCchhccHHHH
Q psy1719 12 LDHIEAEMAARGVTQALIDETRAAPETRMLEDL 44 (73)
Q Consensus 12 ~~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v 44 (73)
..-..+++++.|++...|+.+.....+...+.+
T Consensus 12 ~~~wK~~~R~LGlse~~Id~I~~~~~~d~~Eq~ 44 (86)
T 3oq9_A 12 IQEAKKFARENNIKEGKIDEIMHDSIQDTAEQK 44 (86)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHTCTTCCTTHH
T ss_pred HHHHHHHHHHcCCCHhHHHHHHHhCCCChHHHH
Confidence 445578899999999999988655544333333
No 141
>3qv0_A Mitochondrial acidic protein MAM33; A BOWL like structure, mitochondrial oxidative phosphorylati protein binding; 2.10A {Saccharomyces cerevisiae}
Probab=44.24 E-value=35 Score=23.41 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=21.8
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHH
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETR 33 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r 33 (73)
|+...+.+.++++.|||+.+...-+.
T Consensus 179 De~Lq~~l~~yLeeRGI~~~la~fl~ 204 (227)
T 3qv0_A 179 DEELQESLEAYLESRGVNEELASFIS 204 (227)
T ss_dssp CHHHHHHHHHHHHHTTCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 78899999999999999976665543
No 142
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=41.95 E-value=16 Score=28.51 Aligned_cols=49 Identities=10% Similarity=0.127 Sum_probs=37.6
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhc
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRY 72 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~ 72 (73)
++.||.+.++.+...++...+..-..-+-.|.-||. . .++..||+|.|.
T Consensus 70 k~~i~~~~~~~L~~la~~~~l~~~~~~mf~G~~iN~--t-E~R~vlH~aLR~ 118 (597)
T 3qki_A 70 RQRYSEKTLNKLVEYAEEVELKKKVEKTFMGEKVNM--T-ENRSVLHTALRI 118 (597)
T ss_dssp ESSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBT--T-TTBCCCGGGGGC
T ss_pred cCcCCHHHHHHHHHHHHhcCcHHHHHHHhCCCCCCC--C-CCcccccHHHhC
Confidence 467888888888777777766666667789999995 3 567889999874
No 143
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=41.84 E-value=28 Score=21.58 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHH
Q psy1719 12 LDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEA 48 (73)
Q Consensus 12 ~~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll 48 (73)
..-..+.+++.|++...|+++.....+...+-+..||
T Consensus 20 ~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlL 56 (115)
T 3ezq_A 20 LSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLL 56 (115)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHH
Confidence 3445788999999999999887666555545555444
No 144
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=41.30 E-value=30 Score=18.56 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=32.5
Q ss_pred HHHHHHH--cCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCC
Q psy1719 15 IEAEMAA--RGVTQALIDETRAAPETRMLEDLAAEAARGQDLEY 56 (73)
Q Consensus 15 ie~~m~~--~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~ 56 (73)
|...+.+ ..++..++......++..--..++.|.+.|. |..
T Consensus 15 IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~-I~~ 57 (67)
T 2heo_A 15 ILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDR-VSS 57 (67)
T ss_dssp HHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTS-EEE
T ss_pred HHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCc-Eec
Confidence 3344444 4589999999999999999999999999998 654
No 145
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=40.21 E-value=22 Score=22.57 Aligned_cols=49 Identities=4% Similarity=-0.052 Sum_probs=35.8
Q ss_pred CHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 25 TQALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 25 ~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
++++++.+..+++.-+.+-|+.+++.|++|=.....=+.-++|+-+.+|
T Consensus 46 ~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~g 94 (159)
T 1ass_A 46 DPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG 94 (159)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCC
Confidence 4566888999999999999999999999974332213456777765543
No 146
>3d5l_A Regulatory protein RECX; PSI-II, NYSGXRC, DNA repair, 10123K, structural genomi protein structure initiative; 2.35A {Lactobacillus reuteri}
Probab=36.79 E-value=47 Score=21.98 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=17.9
Q ss_pred HHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 13 DHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 13 ~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
..|..++.++||+.+.++++...
T Consensus 130 ~~I~~eL~~KGI~~~~I~~al~~ 152 (221)
T 3d5l_A 130 GIIRQHLRQKGIGESDIDDALTQ 152 (221)
T ss_dssp HHHHHHHHHTTCCHHHHHHHGGG
T ss_pred HHHHHHHHHcCCCHHHHHHHHHh
Confidence 45788899999998888876543
No 147
>2dk8_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, RNA_POL_RPC34 domain, RNA polymerase III C39 subunit, NPPSFA; NMR {Mus musculus} SCOP: a.4.5.85
Probab=35.85 E-value=22 Score=20.81 Aligned_cols=40 Identities=10% Similarity=0.138 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHcCCCHHhHHHHHhC-chhccHHHHHHHHHcC
Q psy1719 10 AALDHIEAEMAARGVTQALIDETRAA-PETRMLEDLAAEAARG 51 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~~~~~r~a-~e~~~l~~v~~ll~~G 51 (73)
..+.+++.+ ..||+.+.+...... ........+..||+.|
T Consensus 18 ~IL~l~~~~--P~GItd~~L~~~~p~~~~~~r~~aIN~LL~~g 58 (81)
T 2dk8_A 18 RIIELCHQF--PHGITDQVIQNEMPHIEAQQRAVAINRLLSMG 58 (81)
T ss_dssp HHHHHHHHC--SSCEEHHHHHHHCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhC--CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHcC
Confidence 455566554 589998777776544 6677788888888877
No 148
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=31.79 E-value=47 Score=20.44 Aligned_cols=21 Identities=14% Similarity=0.142 Sum_probs=16.7
Q ss_pred HHHHHHcCCCHHhHHHHHhCc
Q psy1719 16 EAEMAARGVTQALIDETRAAP 36 (73)
Q Consensus 16 e~~m~~~Gi~~~~~~~~r~a~ 36 (73)
..+|++.|+++..|+.+....
T Consensus 29 K~~aRkLGLse~~Id~Ie~~~ 49 (112)
T 1ich_A 29 KEFVKRLGLSDHEIDRLELQN 49 (112)
T ss_dssp HHHHHHHTCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHHHHHHHHC
Confidence 467889999999999886444
No 149
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=31.71 E-value=24 Score=22.68 Aligned_cols=48 Identities=6% Similarity=-0.078 Sum_probs=33.6
Q ss_pred HHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCCCCCchHHHHhhhcC
Q psy1719 26 QALIDETRAAPETRMLEDLAAEAARGQDLEYKDPASGATPSVNGLRYK 73 (73)
Q Consensus 26 ~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~~~G~TpLH~Aa~~~ 73 (73)
+++++.+..+++.-+.+-++.+++.|++|=.....=+.-++|+-+.+|
T Consensus 53 ~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~g 100 (178)
T 1gml_A 53 EEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN 100 (178)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHCC
Confidence 456788889999999999999999999864332223456777655543
No 150
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=31.47 E-value=32 Score=18.64 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=20.0
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
......+|...+.++|+++.++...-..
T Consensus 15 ~~~l~~~l~~~R~~~glsq~~lA~~~gi 42 (92)
T 1lmb_3 15 ARRLKAIYEKKKNELGLSQESVADKMGM 42 (92)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHCc
Confidence 3455677777779999998777765443
No 151
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=31.40 E-value=23 Score=20.47 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=14.5
Q ss_pred HHHHHhCchhccHHHHHHHHHcCCCCCCC
Q psy1719 29 IDETRAAPETRMLEDLAAEAARGQDLEYK 57 (73)
Q Consensus 29 ~~~~r~a~e~~~l~~v~~ll~~Gadvn~~ 57 (73)
+.++|..+.. ++.++..|.|.+..
T Consensus 61 L~~AR~~a~~-----~r~~l~~Gidp~~~ 84 (88)
T 3jtz_A 61 LSDARQQREG-----IRKMLALNINLEHH 84 (88)
T ss_dssp HHHHHHHHHH-----HHHHHTCC------
T ss_pred HHHHHHHHHH-----HHHHHHcCCCchhc
Confidence 6777776665 88999999988754
No 152
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=29.98 E-value=65 Score=18.55 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=27.2
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHHcCCC
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAARGQD 53 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gad 53 (73)
..||++.++...-..........++.|.+.|.=
T Consensus 34 ~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kglI 66 (91)
T 2dk5_A 34 NKGIWSRDVRYKSNLPLTEINKILKNLESKKLI 66 (91)
T ss_dssp TTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSE
T ss_pred CCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
Confidence 568999888888888888888888888888853
No 153
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=27.14 E-value=22 Score=20.18 Aligned_cols=10 Identities=30% Similarity=0.524 Sum_probs=5.7
Q ss_pred hhHHHHHHHH
Q psy1719 9 EAALDHIEAE 18 (73)
Q Consensus 9 e~~~~~ie~~ 18 (73)
+++.+|||++
T Consensus 40 ~EVmnYiEnq 49 (67)
T 2bnk_A 40 QEVLNYIETQ 49 (67)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 3556666654
No 154
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A
Probab=26.71 E-value=22 Score=21.31 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=19.7
Q ss_pred ccchhHHHHHHHHHHHcCCCHHhH
Q psy1719 6 CEAEAALDHIEAEMAARGVTQALI 29 (73)
Q Consensus 6 aede~~~~~ie~~m~~~Gi~~~~~ 29 (73)
..-+.|-.+|.+.|.|.|+..+..
T Consensus 24 tsqDrtp~vI~~al~Khnl~~~~~ 47 (87)
T 1lfd_A 24 TSQDKAPTVIRKAMDKHNLDEDEP 47 (87)
T ss_dssp ETTCBHHHHHHHHHHHTTCCSSCG
T ss_pred ecCCCcHHHHHHHHHHcCCCCCCc
Confidence 356789999999999999996533
No 155
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=25.51 E-value=86 Score=16.83 Aligned_cols=39 Identities=21% Similarity=0.047 Sum_probs=30.1
Q ss_pred HHHHHHH-cCCCHHhHHHHHhCchhccHHHHHHHHHcCCC
Q psy1719 15 IEAEMAA-RGVTQALIDETRAAPETRMLEDLAAEAARGQD 53 (73)
Q Consensus 15 ie~~m~~-~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gad 53 (73)
|...+.+ .+++..++.+.........-..++.|.+.|.=
T Consensus 5 Il~~L~~~~~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI 44 (81)
T 2htj_A 5 ILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMV 44 (81)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCE
Confidence 4444555 44898888888888888888899999998863
No 156
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=25.08 E-value=79 Score=16.46 Aligned_cols=24 Identities=13% Similarity=0.124 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCCHHhHHHHHh
Q psy1719 11 ALDHIEAEMAARGVTQALIDETRA 34 (73)
Q Consensus 11 ~~~~ie~~m~~~Gi~~~~~~~~r~ 34 (73)
+...|...+.++|+|+.++...-.
T Consensus 3 ~~~~lk~~r~~~glsq~~lA~~~g 26 (77)
T 2k9q_A 3 LSNELKVERIRLSLTAKSVAEEMG 26 (77)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhC
Confidence 446788888999999877665443
No 157
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=24.82 E-value=68 Score=18.53 Aligned_cols=31 Identities=26% Similarity=0.514 Sum_probs=24.2
Q ss_pred cchhHHHHHHHHHHHcCCCHHhHHHHHhCch
Q psy1719 7 EAEAALDHIEAEMAARGVTQALIDETRAAPE 37 (73)
Q Consensus 7 ede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e 37 (73)
+-+..+..+...|.+.|+.++..+++....+
T Consensus 77 ~f~~wl~~~~~al~~~~~~~~~~~~~~~~~~ 107 (116)
T 1dlw_A 77 QFTTVIGHLRSALTGAGVAAALVEQTVAVAE 107 (116)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCHHHHHHHHHHHH
Confidence 3567889999999999999887777665444
No 158
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=24.81 E-value=52 Score=21.71 Aligned_cols=19 Identities=11% Similarity=0.267 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHcCCCHHh
Q psy1719 10 AALDHIEAEMAARGVTQAL 28 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~ 28 (73)
.+.++|...|.+|||++-.
T Consensus 60 qv~DiL~~kl~KRgid~k~ 78 (163)
T 1in0_A 60 QLIEILIGSCIKRGIEHSS 78 (163)
T ss_dssp HHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHcCCCchh
Confidence 6788999999999999543
No 159
>3mol_A Heme acquisition protein hasap; hemophore, heme transport, H32A mutation, holo protein, heme protein, transport protein; HET: HEM; 1.20A {Pseudomonas aeruginosa} PDB: 3mom_A* 3mok_A 3ell_A
Probab=24.79 E-value=49 Score=22.19 Aligned_cols=37 Identities=5% Similarity=0.083 Sum_probs=24.6
Q ss_pred HcCCCHHhHHHHHhCchhccHHHHHHHHH---cCCCCCCC
Q psy1719 21 ARGVTQALIDETRAAPETRMLEDLAAEAA---RGQDLEYK 57 (73)
Q Consensus 21 ~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~---~Gadvn~~ 57 (73)
.||-...-+--|.+--..-+|+.++.||. .|.|||.+
T Consensus 129 ~qG~~h~~IYgLmrGna~plLeiLkA~~~~~~~gidvntp 168 (184)
T 3mol_A 129 RDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINST 168 (184)
T ss_dssp GGSHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCTTSB
T ss_pred cCCccchheeehhcCCcHHHHHHHHhhhhcccCCcccCCc
Confidence 34433334444544444588999999877 89999965
No 160
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=24.78 E-value=1.1e+02 Score=19.40 Aligned_cols=44 Identities=9% Similarity=0.090 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCC
Q psy1719 13 DHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKD 58 (73)
Q Consensus 13 ~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d 58 (73)
.-+-.++.++|++. ..=+|.......+..++..+..|.+++..+
T Consensus 31 ~~~i~~l~~~gl~~--eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~ 74 (201)
T 3msx_B 31 LDMLFFLNQKGPLT--KGIFRQSANVKSCRELKEKLNSGVEVHLDC 74 (201)
T ss_dssp HHHHHHHHHHGGGS--TTTTTSCCCHHHHHHHHHHHHHTCCCCTTS
T ss_pred HHHHHHHHHhCCCC--CCeeeeCCCHHHHHHHHHHhccCCCCCCCc
Confidence 33444566666653 122466666667777888888898776543
No 161
>1r69_A Repressor protein CI; gene regulating protein; 2.00A {Phage 434} SCOP: a.35.1.2 PDB: 1pra_A 1per_L 1rpe_L* 2or1_L* 1r63_A 2r63_A 1sq8_A
Probab=24.76 E-value=74 Score=15.81 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 12 LDHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 12 ~~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
...|...+.++|+++.++...-..
T Consensus 3 ~~~l~~~r~~~glsq~~lA~~~gi 26 (69)
T 1r69_A 3 SSRVKSKRIQLGLNQAELAQKVGT 26 (69)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHCc
Confidence 456888899999998777665543
No 162
>1zug_A Phage 434 CRO protein; gene regulating protein, transcription regulation; NMR {Phage 434} SCOP: a.35.1.2 PDB: 2cro_A 3cro_L*
Probab=23.76 E-value=79 Score=15.79 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 11 ALDHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 11 ~~~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
....|...+.++|+++.++...-..
T Consensus 4 ~~~~l~~~r~~~glsq~~lA~~~gi 28 (71)
T 1zug_A 4 LSERLKKRRIALKMTQTELATKAGV 28 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCC
Confidence 4567888899999998777665543
No 163
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=23.71 E-value=84 Score=16.06 Aligned_cols=25 Identities=8% Similarity=0.114 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHcCCCHHhHHHHHh
Q psy1719 10 AALDHIEAEMAARGVTQALIDETRA 34 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~~~~~r~ 34 (73)
.....|...+.++|+|+.++...-.
T Consensus 7 ~~~~~l~~~r~~~g~sq~~lA~~~g 31 (78)
T 3b7h_A 7 FVSEHLMELITQQNLTINRVATLAG 31 (78)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHC
Confidence 4567888899999999877766544
No 164
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=23.36 E-value=78 Score=15.59 Aligned_cols=27 Identities=15% Similarity=0.097 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHcCCCHHhHHHHHhCc
Q psy1719 10 AALDHIEAEMAARGVTQALIDETRAAP 36 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~~~~~r~a~ 36 (73)
.....|...+.++|+++.++...-...
T Consensus 5 ~~~~~l~~~r~~~g~s~~~lA~~~gis 31 (68)
T 2r1j_L 5 LMGERIRARRKKLKIRQAALGKMVGVS 31 (68)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCC
Confidence 345678888999999987776655433
No 165
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.32 E-value=1.2e+02 Score=17.54 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=28.9
Q ss_pred HHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCC
Q psy1719 17 AEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYK 57 (73)
Q Consensus 17 ~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~ 57 (73)
.++-.-|++...+..+........-..+.+|+.+..|++..
T Consensus 26 ~qL~~MGF~~~~a~~AL~~~n~n~e~A~ewL~~h~~D~D~~ 66 (85)
T 2dkl_A 26 KQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDVDKR 66 (85)
T ss_dssp HHHHHHTCCHHHHHHHHHHTTSCHHHHHHHHHTTSCCSSCC
T ss_pred HHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHHCcCCcccc
Confidence 44555799987777776555555566778888888887744
No 166
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=23.27 E-value=84 Score=15.92 Aligned_cols=25 Identities=16% Similarity=0.116 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHcCCCHHhHHHHHhC
Q psy1719 11 ALDHIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 11 ~~~~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
....|...+.++|+++.++...-..
T Consensus 6 ~~~~l~~~r~~~gls~~~lA~~~gi 30 (76)
T 1adr_A 6 MGERIRARRKKLKIRQAALGKMVGV 30 (76)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCc
Confidence 4567888899999998777665443
No 167
>1wty_A Hypothetical protein TTHA0048; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: a.24.16.2 PDB: 2ywa_A
Probab=23.16 E-value=23 Score=21.13 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHcCCCHHhHHH-HHhCchhccHHHHHHHH
Q psy1719 10 AALDHIEAEMAARGVTQALIDE-TRAAPETRMLEDLAAEA 48 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~~~~-~r~a~e~~~l~~v~~ll 48 (73)
.+.+++...+..+|+.+....+ +|.+.+.|.+.+-+.|.
T Consensus 37 lawk~~k~~l~~~g~~~~s~rd~~r~a~~~glI~~~~~w~ 76 (119)
T 1wty_A 37 LAWKTLKTFLELQGLEARSPRAAIRGAFQVGLLPEDPFWL 76 (119)
T ss_dssp HHHHHHHHHHHHHTCCCSSHHHHHHHHHHHTSSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCCcHHHHH
Confidence 3455666666677875444433 66666666665544443
No 168
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=22.91 E-value=79 Score=15.47 Aligned_cols=22 Identities=5% Similarity=0.086 Sum_probs=15.6
Q ss_pred HHHHHHHHcCCCHHhHHHHHhC
Q psy1719 14 HIEAEMAARGVTQALIDETRAA 35 (73)
Q Consensus 14 ~ie~~m~~~Gi~~~~~~~~r~a 35 (73)
.|...+.++|+++.++...-..
T Consensus 5 ~l~~~r~~~g~s~~~lA~~~gi 26 (66)
T 2xi8_A 5 NLKLIREKKKISQSELAALLEV 26 (66)
T ss_dssp CHHHHHHHTTCCHHHHHHHHTS
T ss_pred HHHHHHHHcCCCHHHHHHHHCc
Confidence 3667788899998776665443
No 169
>1qus_A Lytic murein transglycosylase B; alpha-helical protein with AN five-stranded antiparallel beta-sheet, hydrolase; HET: BCN; 1.70A {Escherichia coli} SCOP: d.2.1.6 PDB: 1d0k_A* 1d0m_A* 1qdr_A* 1qdt_A 1d0l_A* 1qut_A* 1ltm_A*
Probab=22.72 E-value=98 Score=22.17 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=30.3
Q ss_pred cccccchhHHHHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHH
Q psy1719 3 YDICEAEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAA 46 (73)
Q Consensus 3 ~Diaede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ 46 (73)
-|+++.+....++....+++||++..++.+..-.+. .-..+++
T Consensus 13 ~~~~~~~~~~~f~~~a~~~~Gis~~~~~~~f~~~~~-~~~vi~~ 55 (322)
T 1qus_A 13 GDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKR-LDSVLRL 55 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHHHHHHHHTTCCC-CHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHcCCCHHHHHHHHhcCCc-CHHHHHh
Confidence 356677888899987777779999999887665543 3344443
No 170
>2lm0_A AF4/FMR2 family member 1/protein AF-9 chimera; intrinsically disordered, nuclear protein; NMR {Homo sapiens}
Probab=22.64 E-value=34 Score=21.74 Aligned_cols=21 Identities=14% Similarity=0.607 Sum_probs=17.4
Q ss_pred cccc-cchhHHHHHHHHHHHcC
Q psy1719 3 YDIC-EAEAALDHIEAEMAARG 23 (73)
Q Consensus 3 ~Dia-ede~~~~~ie~~m~~~G 23 (73)
||+| -|..|..-||.+++.-|
T Consensus 102 FDLc~LD~~Tv~klq~~l~~~~ 123 (125)
T 2lm0_A 102 FDLCSLDKTTVRKLQSYLETSG 123 (125)
T ss_dssp ECTTTSCHHHHHHHHHHTTSSC
T ss_pred ceeeccCHHHHHHHHHHHHhhc
Confidence 7999 59999999999876544
No 171
>2bmm_A Thermostable hemoglobin from thermobifida fusca; bacterial hemoglobin, thermostable protein, oxygen storage/transport; HET: HEM; 2.48A {Thermobifida fusca}
Probab=22.50 E-value=70 Score=18.67 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=24.4
Q ss_pred cchhHHHHHHHHHHHcCCCHHhHHHHHhCch
Q psy1719 7 EAEAALDHIEAEMAARGVTQALIDETRAAPE 37 (73)
Q Consensus 7 ede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e 37 (73)
+-+..+..+...|.+.|++++..+++....+
T Consensus 82 ~f~~wl~~~~~al~e~~~~~~~~~~~~~~~~ 112 (123)
T 2bmm_A 82 ERDRWLTHMRAAVDDLALPAHLEQQLWEYLV 112 (123)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3567889999999999999877777755444
No 172
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=21.96 E-value=71 Score=19.32 Aligned_cols=32 Identities=19% Similarity=0.037 Sum_probs=25.5
Q ss_pred ccchhHHHHHHHHHHHcCCCHHhHHHHHhCch
Q psy1719 6 CEAEAALDHIEAEMAARGVTQALIDETRAAPE 37 (73)
Q Consensus 6 aede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e 37 (73)
.+-+.-+..+...|.+.|++++..+.+....+
T Consensus 88 ~~fd~Wl~~~~~al~e~~~~~~~~~~l~~~~~ 119 (133)
T 2xyk_A 88 AERDEWLLCFRRAMDETIENAKLREIIWAPVE 119 (133)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34668899999999999999877777665554
No 173
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=21.88 E-value=1.4e+02 Score=18.11 Aligned_cols=44 Identities=5% Similarity=-0.082 Sum_probs=25.9
Q ss_pred chhHHHHHHHHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcC
Q psy1719 8 AEAALDHIEAEMAARGVTQALIDETRAAPETRMLEDLAAEAARG 51 (73)
Q Consensus 8 de~~~~~ie~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~G 51 (73)
+..+.+-|..-|.--|++.+.+-.+....--.--..+..|++.+
T Consensus 36 d~d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 36 DADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp CHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred cccHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 34556667666666699976655555544444444455555444
No 174
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=21.58 E-value=45 Score=23.95 Aligned_cols=24 Identities=17% Similarity=0.475 Sum_probs=16.3
Q ss_pred Ccccccc--chhHHHH-----HHHHHHHcCC
Q psy1719 1 MPYDICE--AEAALDH-----IEAEMAARGV 24 (73)
Q Consensus 1 mp~Diae--de~~~~~-----ie~~m~~~Gi 24 (73)
||+|.|- -..|+-| |++++.++||
T Consensus 77 ~pld~~~A~sqG~igy~l~~al~~~l~~~g~ 107 (317)
T 3kzf_A 77 MPLHVCGAMSQGFIGYMMSQAMDNVFCANNE 107 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCccccCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 6999994 4455544 4567777874
No 175
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=21.25 E-value=1.4e+02 Score=19.08 Aligned_cols=36 Identities=8% Similarity=0.006 Sum_probs=25.9
Q ss_pred HHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCC
Q psy1719 19 MAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYK 57 (73)
Q Consensus 19 m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~ 57 (73)
..+.|++ .+.++....+......+.+.+.|.+....
T Consensus 190 ~~~~Gl~---~~~a~~~~~~~~~gs~~~~~~~~~~p~~l 225 (247)
T 3gt0_A 190 AVLDGMP---RNQAYKFAAQAVLGSAKMVLETGIHPGEL 225 (247)
T ss_dssp HHHTTCC---HHHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred HHHcCCC---HHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 4469999 57788888888888899998888776543
No 176
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=21.23 E-value=95 Score=18.11 Aligned_cols=20 Identities=15% Similarity=0.214 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCCCHHhHH
Q psy1719 11 ALDHIEAEMAARGVTQALID 30 (73)
Q Consensus 11 ~~~~ie~~m~~~Gi~~~~~~ 30 (73)
=+.-|-..|.+.||+++++-
T Consensus 60 Kl~~~~e~l~~~GI~~eeL~ 79 (86)
T 3nr7_A 60 KLQQYREMLIADGIDPNELL 79 (86)
T ss_dssp HHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH
Confidence 34556678899999976554
No 177
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=20.89 E-value=93 Score=18.11 Aligned_cols=31 Identities=29% Similarity=0.458 Sum_probs=24.1
Q ss_pred cchhHHHHHHHHHHHcCCCHHhHHHHHhCch
Q psy1719 7 EAEAALDHIEAEMAARGVTQALIDETRAAPE 37 (73)
Q Consensus 7 ede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e 37 (73)
+-+..+..+...|.+.|+.++..+++....+
T Consensus 82 ~f~~wl~~~~~al~~~~~~~~~~~~~~~~~~ 112 (121)
T 3aq9_A 82 HFDAIIENLAATLKELGVTDAVINEAAKVIE 112 (121)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3567889999999999999877777655443
No 178
>1tlq_A Hypothetical protein YPJQ; structural genomics, NYSGXRC, T1519 protein structure initiative, NEW YORK SGX research center structural genomics; 2.40A {Bacillus subtilis} SCOP: a.195.1.1
Probab=20.67 E-value=1.1e+02 Score=20.61 Aligned_cols=23 Identities=22% Similarity=0.229 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHcCCCHHhHHHH
Q psy1719 10 AALDHIEAEMAARGVTQALIDET 32 (73)
Q Consensus 10 ~~~~~ie~~m~~~Gi~~~~~~~~ 32 (73)
.+.+.+.+.+++||||.+++-++
T Consensus 10 ~~~~~~i~~L~eRGVtl~dIaei 32 (189)
T 1tlq_A 10 EMVDITKDMLNKRGVMIEDIARI 32 (189)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHH
Confidence 45667888999999997766653
No 179
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=20.66 E-value=77 Score=21.79 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=15.8
Q ss_pred HHHHHHcCCCHHhHHHHHh
Q psy1719 16 EAEMAARGVTQALIDETRA 34 (73)
Q Consensus 16 e~~m~~~Gi~~~~~~~~r~ 34 (73)
+.++.+.|++++.++.+|.
T Consensus 274 ~~YL~~~Gl~~~~i~~LR~ 292 (296)
T 1ywf_A 274 GGYLRDAGISQATVNRMRG 292 (296)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 5677778999999998875
No 180
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=20.38 E-value=1.1e+02 Score=16.07 Aligned_cols=26 Identities=12% Similarity=0.091 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHcCCCHHhHHHHHh
Q psy1719 9 EAALDHIEAEMAARGVTQALIDETRA 34 (73)
Q Consensus 9 e~~~~~ie~~m~~~Gi~~~~~~~~r~ 34 (73)
......|...+.++|+++.++...-.
T Consensus 11 ~~~~~~l~~~r~~~glsq~~lA~~~g 36 (88)
T 2wiu_B 11 TQLANAMKLVRQQNGWTQSELAKKIG 36 (88)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhC
Confidence 34567888899999999877766543
No 181
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=20.33 E-value=1.2e+02 Score=16.44 Aligned_cols=43 Identities=7% Similarity=0.090 Sum_probs=28.9
Q ss_pred HHHHHcCCCHHhHHHHHhCchhccHHHHHHHHHcCCCCCCCCC
Q psy1719 17 AEMAARGVTQALIDETRAAPETRMLEDLAAEAARGQDLEYKDP 59 (73)
Q Consensus 17 ~~m~~~Gi~~~~~~~~r~a~e~~~l~~v~~ll~~Gadvn~~d~ 59 (73)
+.+..-|++.+....+..+.....-..+.+|+.+..+.+...+
T Consensus 14 ~~L~~MGF~~~~a~~AL~~~~~nve~A~e~L~~~~~~~~~~~p 56 (63)
T 1wji_A 14 KHITEMGFSKEASRQALMDNGNNLEAALNVLLTSNKQKPVMGP 56 (63)
T ss_dssp HHHHTTTCCHHHHHHHHHHTTSCHHHHHHHHHHHSSCCCCCSS
T ss_pred HHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHCCCCcccCCC
Confidence 4455679998777666666655445567788887776665444
No 182
>2bkm_A Truncated hemoglobin from geobacillus stearothermophilus; hypothetical protein, oxygen transport, transport, oxygen storage; HET: HEM; 1.5A {Geobacillus stearothermophilus}
Probab=20.27 E-value=77 Score=18.70 Aligned_cols=31 Identities=23% Similarity=0.162 Sum_probs=24.5
Q ss_pred cchhHHHHHHHHHHHcCCCHHhHHHHHhCch
Q psy1719 7 EAEAALDHIEAEMAARGVTQALIDETRAAPE 37 (73)
Q Consensus 7 ede~~~~~ie~~m~~~Gi~~~~~~~~r~a~e 37 (73)
+-+..+..+...|.+.|++++..+.+....+
T Consensus 84 ~fd~wl~~~~~al~e~~~~~~~~~~~~~~~~ 114 (128)
T 2bkm_A 84 RAEAWLACMRAAMDEIGLSGPAREQFYHRLV 114 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3567889999999999999877777755544
Done!