RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17191
(377 letters)
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 251 bits (642), Expect = 3e-80
Identities = 140/382 (36%), Positives = 194/382 (50%), Gaps = 64/382 (16%)
Query: 26 DKIERCNFYLNTVVETARRGEPVDGRLVSFLMQSPNGDGGQWDMLVNLIVNHGLMP---- 81
DK+ERC F+L+ V+TA+R EP DGRLV FL+ +P DGGQWDMLVN++ +G++P
Sbjct: 105 DKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCF 164
Query: 82 ---KNCLVWIRIRIIYNNQPVELLMKL-----AAESIKNNEAVWFGCENRIIRIRIIYNN 133
R+ I N++ E ++L + + A I R+ I
Sbjct: 165 PESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLG 224
Query: 134 QPVELLMKLAAESIKNNEAVWFG-CENSRIRIIYNNQPVELLMKLAAESIKNNEAV---- 188
P E W ++ I P+E + + +
Sbjct: 225 NPPE-------------TFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVN 271
Query: 189 ----------WFG---CENRIIRIRIIYNNQPVELLMKLAAESIKNNEAVWFGCEVSKRF 235
+ N + + +YNNQP++ L K+ A SIK+ EAVWFGC+V K F
Sbjct: 272 DPRPQHKHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHF 331
Query: 236 ANKLGLNDLEIHNFKAVFDSDVSLPMSKAERMMYGESSMTHAMVISAVSIDKETE-EPTK 294
+KLGL+D+ +++ + VF + M+KAER+ +GES MTHAM +AVS + + TK
Sbjct: 332 NSKLGLSDMNLYDHELVFGVSLK-NMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTK 390
Query: 295 WRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDEYVFEVVVDKKYVPAS 354
WRVENSWGE+ HKGY+ MT WF EYV+EVVVD+K+VP
Sbjct: 391 WRVENSWGEDHGHKGYLCMTDEWF-------------------SEYVYEVVVDRKHVPEE 431
Query: 355 VLDVFNQEPTILPAWDPMGTLA 376
VL V QEP ILPAWDPMG LA
Sbjct: 432 VLAVLEQEPIILPAWDPMGALA 453
Score = 43.0 bits (101), Expect = 3e-05
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 1 MSKAERMMYGESSMTHAMVISAVSIDKIERCNF 33
M+KAER+ +GES MTHAM +AVS + F
Sbjct: 356 MNKAERLTFGESLMTHAMTFTAVSEKDDQDGAF 388
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 243 bits (622), Expect = 2e-77
Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 39/369 (10%)
Query: 26 DKIERCNFYLNTVVETARRGEPVDGRLVSFLMQSPNGDGGQWDMLVNLIVNHGLMPKNC- 84
DK+E+ N++L+ +V +A + +D RLV +L+ +P DGGQ+ M +NL+ +GL+PK+
Sbjct: 111 DKLEKANYFLDQIVSSA--DQDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLY 168
Query: 85 --LVWIRIRIIYNNQPVELLMKLAAESIKNNEAVWFGCENRIIRIRIIYNNQPVELL-MK 141
L + N + ++ AE+++ ++ I+ +R + L+ +
Sbjct: 169 GDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVTLREQMQREIFRLMSLF 228
Query: 142 LAAESIKNNEAV-WFGCENSRIRIIYNNQPVELLMKLAAESIKNNEAVW----------- 189
+ ++ NE W + + + P+E K A ++
Sbjct: 229 MDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLI 288
Query: 190 --FGCENRIIRIRIIYNNQPVELLMKLAAESIKNNEAVWFGCEVSKRFANKLGLNDLEIH 247
N + +IY N E L KL + ++NN+AV+FG K K G+ D+E+
Sbjct: 289 KIDRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIELW 348
Query: 248 NFKAVFDSDVSLPMSKAERMMYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNH 307
N+ A+ +LP KA R+ Y ES MTHAM+I+ +D+ ++ P ++RVENSWG++
Sbjct: 349 NYPAI---GYNLPQQKASRIRYHESLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGK 405
Query: 308 KGYILMTSPWFKEYVFEVVVDKKYVPASVLDEYVFEVVVDKKYVPASVLDVFNQEPTILP 367
G +MT +F+EY F++VVD +P + +EP +LP
Sbjct: 406 DGLYVMTQKYFEEYCFQIVVDINELPKELAS----------------KFTSGKEEPIVLP 449
Query: 368 AWDPMGTLA 376
WDPMG LA
Sbjct: 450 IWDPMGALA 458
Score = 44.6 bits (105), Expect = 1e-05
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 1 MSKAERMMYGESSMTHAMVISAVSIDK 27
KA R+ Y ES MTHAM+I+ +D+
Sbjct: 359 QQKASRIRYHESLMTHAMLITGCHVDE 385
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 35.0 bits (79), Expect = 0.010
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 249 FKAVFDSDVSLPMSKAERMMYGESSMTHAMVISAVSIDKETEEPTK-WRVENSWGEEQNH 307
A +S + M H +++ + + K W V+NSWGEE
Sbjct: 232 IDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGM 291
Query: 308 KGYILM 313
GY+ M
Sbjct: 292 GGYVKM 297
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 32.6 bits (73), Expect = 0.054
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Query: 267 MMYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ + HA+ ++NSWG KGY+ +
Sbjct: 150 DGPCGTKLDHAVTAVGYGTSDGKNY---IIIKNSWGPNWGEKGYMRL 193
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 32.3 bits (72), Expect = 0.065
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 267 MMYGESSMTHAMVISAVSIDKETEEPTK-WRVENSWGEEQNHKGYILM 313
++ H +++ + + +K W V+NSWG E GY+ +
Sbjct: 155 PDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKI 202
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 31.9 bits (71), Expect = 0.080
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 257 VSLPMSKAERMMYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
S M+ +M S + V + P W ++NSW + +GYI +
Sbjct: 141 ASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPY-WIIKNSWTTQWGEEGYIRI 196
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 32.2 bits (72), Expect = 0.084
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 254 DSDVSLPMSKAERMMYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
SD L S + + GE HA+ I ++ T W V NSW + G+ +
Sbjct: 178 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPY---WLVANSWNTDWGDNGFFKI 234
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 31.9 bits (71), Expect = 0.095
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 260 PMSKAERMMYGESSMTHAMVISAVSIDKETEEPTK-WRVENSWGEEQNHKGYILM 313
+ HA+++ V ++ W V+NSWG GY +
Sbjct: 159 HHTGLRDPFNPFELTNHAVLL--VGYGTDSASGMDYWIVKNSWGTGWGENGYFRI 211
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 31.9 bits (71), Expect = 0.097
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 272 SSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ + AV +E P W V+NSWG + GY L+
Sbjct: 168 TPDKVNHAVLAVGYGEENGIPY-WIVKNSWGPQWGMNGYFLI 208
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 31.5 bits (70), Expect = 0.12
Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Query: 242 NDLEIHNFKAVFDSDVSLPMSKAERMMYGESSMTHAMVISAVSIDKETEEPTKWRVENSW 301
N + L S ++ H +++ E W V+NSW
Sbjct: 130 NKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKE---YWLVKNSW 186
Query: 302 GEEQNHKGYILM 313
G +GYI M
Sbjct: 187 GHNFGEEGYIRM 198
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 31.1 bits (69), Expect = 0.14
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 261 MSKAERMMYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
SK +S + AV + W ++NSWGE +KGYILM
Sbjct: 145 YSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKH-WIIKNSWGENWGNKGYILM 196
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 31.1 bits (69), Expect = 0.15
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Query: 220 KNNEAVWFGCEVSKRFANKLGLNDLEIHNFKAVFDSDVSLPMSKAERMMYGESSMTHAMV 279
+ G + R + + ++ + + + G
Sbjct: 100 RLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHG 159
Query: 280 ISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ V ++ + W V NSWG+ ++GYI M
Sbjct: 160 VVIVGYGTQSGKN-YWIVRNSWGQNWGNQGYIWM 192
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 31.1 bits (69), Expect = 0.16
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 269 YGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ HA+++ + W ++NSWG + KGY +
Sbjct: 154 CSPWLIDHAVLLVGYGQRSDVPF---WAIKNSWGTDWGEKGYYYL 195
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 30.7 bits (68), Expect = 0.18
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 268 MYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ + HA+ V K + ++NSWG KGYI +
Sbjct: 151 GPCGTKVDHAVTA--VGYGKSGGKG-YILIKNSWGTAWGEKGYIRI 193
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 31.2 bits (69), Expect = 0.18
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 272 SSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
+ + H + ++ I TE W V NSWGE +G++ +
Sbjct: 209 TYINHVVSVAGWGISDGTEY---WIVRNSWGEPWGERGWLRI 247
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 31.2 bits (69), Expect = 0.21
Identities = 12/46 (26%), Positives = 13/46 (28%), Gaps = 3/46 (6%)
Query: 268 MYGESSMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
G HA+ I V W V NSW GY
Sbjct: 239 DNGYQPNYHAVNI--VGYSNAQGVDY-WIVRNSWDTNWGDNGYGYF 281
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 30.0 bits (66), Expect = 0.38
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 273 SMTHAMVISAVSIDKETEEPTKWRVENSWGEEQNHKGYILM 313
++ HA+ I + + W V+NSW +GY+ +
Sbjct: 159 AIDHAVTIVGYGTEGGIDY---WIVKNSWDTTWGEEGYMRI 196
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 29.9 bits (66), Expect = 0.39
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 272 SSMTHAMVISAVSIDKETEEPTK-------WRVENSWGEEQNHKGYILM 313
+ HA+++ + + TK + ++NSWG++ +G+I +
Sbjct: 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINI 218
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 29.9 bits (66), Expect = 0.40
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 295 WRVENSWGEEQNHKGYILM 313
W V NSWG KGYI M
Sbjct: 169 WIVRNSWGRYWGEKGYIRM 187
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 29.6 bits (65), Expect = 0.57
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 295 WRVENSWGEEQNHKGYILM 313
W V+NSWG E KGYI M
Sbjct: 179 WTVKNSWGPEWGEKGYIRM 197
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 29.2 bits (64), Expect = 0.61
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 295 WRVENSWGEEQNHKGYILM 313
W V+NSWG+ GYI
Sbjct: 175 WIVKNSWGKNWGESGYIRA 193
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 28.9 bits (63), Expect = 0.75
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 295 WRVENSWGEEQNHKGYILM 313
++NSWG GYI +
Sbjct: 171 ILIKNSWGTGWGENGYIRI 189
>d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal
domain {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 111
Score = 26.9 bits (59), Expect = 1.8
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 125 IRIRIIYNNQPVELLMKLA---AESIKNNEAVWFGCENSRIRIIYNNQPVELLMKLAAES 181
+ + Q +E+ ++ S+K A ++ ++ ++ M LA +
Sbjct: 32 VSKPNENDGQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYN 91
Query: 182 IKNN 185
+
Sbjct: 92 VGAG 95
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.403
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,441,951
Number of extensions: 68211
Number of successful extensions: 210
Number of sequences better than 10.0: 1
Number of HSP's gapped: 203
Number of HSP's successfully gapped: 36
Length of query: 377
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 290
Effective length of database: 1,213,086
Effective search space: 351794940
Effective search space used: 351794940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.3 bits)