RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17192
(74 letters)
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 119 bits (300), Expect = 1e-34
Identities = 48/72 (66%), Positives = 54/72 (75%)
Query: 2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
D + TKWRVENSWGE+ HKGY+ MT WF EYV+EVVVD+K+VP VL V QEP
Sbjct: 382 DDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPI 441
Query: 62 ILPAWDPMGTLA 73
ILPAWDPMG LA
Sbjct: 442 ILPAWDPMGALA 453
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 116 bits (292), Expect = 2e-33
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
+D+ ++ P ++RVENSWG++ G +MT +F+EY F++VVD +P + F
Sbjct: 383 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 442
Query: 58 QEPTILPAWDPMGTLA 73
+EP +LP WDPMG LA
Sbjct: 443 EEPIVLPIWDPMGALA 458
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 28.9 bits (63), Expect = 0.046
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V NSWGE +G++ +
Sbjct: 229 WIVRNSWGEPWGERGWLRI 247
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 28.4 bits (62), Expect = 0.049
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 11 WRVENSWGEEQNHKGYILM 29
++NSWG KGY+ +
Sbjct: 175 IIIKNSWGPNWGEKGYMRL 193
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 28.4 bits (62), Expect = 0.050
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG +GYI M
Sbjct: 180 WLVKNSWGHNFGEEGYIRM 198
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 28.4 bits (62), Expect = 0.051
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W ++NSW + +GYI +
Sbjct: 178 WIIKNSWTTQWGEEGYIRI 196
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 28.4 bits (62), Expect = 0.051
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V NSWG KGYI M
Sbjct: 169 WIVRNSWGRYWGEKGYIRM 187
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 28.4 bits (62), Expect = 0.052
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W ++NSWGE +KGYILM
Sbjct: 178 WIIKNSWGENWGNKGYILM 196
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 28.4 bits (62), Expect = 0.052
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V NSW + G+ +
Sbjct: 216 WLVANSWNTDWGDNGFFKI 234
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 28.4 bits (62), Expect = 0.057
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG + GY L+
Sbjct: 190 WIVKNSWGPQWGMNGYFLI 208
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 28.1 bits (61), Expect = 0.064
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V NSWG+ ++GYI M
Sbjct: 174 WIVRNSWGQNWGNQGYIWM 192
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 28.4 bits (62), Expect = 0.064
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG E KGYI M
Sbjct: 179 WTVKNSWGPEWGEKGYIRM 197
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 28.4 bits (62), Expect = 0.064
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W ++NSWG + KGY +
Sbjct: 177 WAIKNSWGTDWGEKGYYYL 195
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 28.1 bits (61), Expect = 0.068
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG GY +
Sbjct: 193 WIVKNSWGTGWGENGYFRI 211
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 28.0 bits (61), Expect = 0.078
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 11 WRVENSWGEEQNHKGYILM 29
+ ++NSWG++ +G+I +
Sbjct: 200 YIIKNSWGQQWGERGFINI 218
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 28.0 bits (61), Expect = 0.079
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 11 WRVENSWGEEQNHKGYILM 29
++NSWG KGYI +
Sbjct: 175 ILIKNSWGTAWGEKGYIRI 193
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 28.1 bits (61), Expect = 0.080
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWGEE GY+ M
Sbjct: 279 WLVKNSWGEEWGMGGYVKM 297
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 28.1 bits (61), Expect = 0.082
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSW +GY+ +
Sbjct: 178 WIVKNSWDTTWGEEGYMRI 196
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 27.7 bits (60), Expect = 0.093
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG E GY+ +
Sbjct: 184 WLVKNSWGPEWGSNGYVKI 202
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 27.7 bits (60), Expect = 0.099
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V+NSWG+ GYI
Sbjct: 175 WIVKNSWGKNWGESGYIRA 193
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 27.7 bits (60), Expect = 0.11
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 11 WRVENSWGEEQNHKGYILM 29
W V NSW GY
Sbjct: 263 WIVRNSWDTNWGDNGYGYF 281
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 27.3 bits (59), Expect = 0.12
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 11 WRVENSWGEEQNHKGYILM 29
++NSWG GYI +
Sbjct: 171 ILIKNSWGTGWGENGYIRI 189
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 184
Score = 24.5 bits (52), Expect = 1.3
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 5 TEEPTKWRVENSWGEEQNHKGYILMTSPW-FKEYVFEVVVDKKYVPASVLDVFNQEPTI 62
T E + + + + + E + +V A+ LDVF EP
Sbjct: 109 TPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCT 167
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 24.2 bits (52), Expect = 1.7
Identities = 6/27 (22%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 28 LMTSPWFKEYVFEVVVDKKYVPASVLD 54
LM + K E V ++ S +
Sbjct: 295 LMVHAFIKRSDAEEVDFAGWL-CSTIG 320
>d1tx3a1 c.52.1.19 (A:2-258) Restriction endonuclease HincII
{Haemophilus influenzae [TaxId: 727]}
Length = 257
Score = 23.8 bits (51), Expect = 2.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 10 KWRVENSWGEEQNHKGYILMTSPWFKEYV 38
W +EN + E+QN IL+ F E +
Sbjct: 97 NWSIENLFEEKQNDTADILLVKDQFYELL 125
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 316
Score = 23.1 bits (49), Expect = 3.8
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 28 LMTSPWFKEYVFEVVVDKKYVPASVLDVFNQE 59
+ PWFKE V+E ++ + + +
Sbjct: 254 VKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQ 285
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 337
Score = 23.2 bits (49), Expect = 4.1
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 28 LMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
+M +F ++ VV KK +P V ++ T
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDT 291
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 23.1 bits (49), Expect = 4.6
Identities = 4/11 (36%), Positives = 8/11 (72%)
Query: 28 LMTSPWFKEYV 38
+ P+F++YV
Sbjct: 267 ALAHPFFQQYV 277
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 320
Score = 23.2 bits (49), Expect = 4.9
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Query: 28 LMTSPWFKEYVFEVVVDKKYVP------ASVLDVFNQEPTIL 63
+ P F+E +E + K+ P S D N + L
Sbjct: 252 IRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFL 293
>d1kcgc_ d.19.1.1 (C:) Class I MHC-related molecule Ulbp3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 22.3 bits (47), Expect = 7.0
Identities = 5/31 (16%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 9 TKWRVENSWGEEQNHKGYILMTSP-WFKEYV 38
K + E G K + W ++++
Sbjct: 140 MKEKWEKDSGLTTFFKMVSMRDCKSWLRDFL 170
>g1r8o.1 b.42.4.1 (A:,B:) Two-chain trypsin inhibitor {Balsam
copaiba (Copaifera langsdorffii) [TaxId: 280048]}
Length = 167
Score = 22.5 bits (48), Expect = 7.0
Identities = 4/16 (25%), Positives = 8/16 (50%)
Query: 6 EEPTKWRVENSWGEEQ 21
+P+ W V++ W
Sbjct: 86 PKPSMWSVKSGWKLPS 101
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 22.3 bits (46), Expect = 7.5
Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 26 YILMTSPW--FKEYVFEVVVDKKYVPASVLDVFNQEPTI 62
++ S + K++ + +DVF EP
Sbjct: 127 LLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPAT 165
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
{Cow (Bos taurus) [TaxId: 9913]}
Length = 364
Score = 22.4 bits (47), Expect = 7.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 28 LMTSPWFKEYVFEVVVDKKYVP 49
+ SP+F+ +++V +KY P
Sbjct: 262 VKESPFFRSLDWQMVFLQKYPP 283
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.425
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 292,498
Number of extensions: 10888
Number of successful extensions: 52
Number of sequences better than 10.0: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 35
Length of query: 74
Length of database: 2,407,596
Length adjustment: 41
Effective length of query: 33
Effective length of database: 1,844,666
Effective search space: 60873978
Effective search space used: 60873978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.6 bits)