Query psy17199
Match_columns 182
No_of_seqs 148 out of 1778
Neff 9.6
Searched_HMMs 29240
Date Sat Aug 17 00:23:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.8 8.4E-20 2.9E-24 150.9 4.5 108 12-119 68-180 (510)
2 3v2y_A Sphingosine 1-phosphate 99.7 6.1E-18 2.1E-22 140.0 4.0 106 12-118 96-203 (520)
3 2lnl_A C-X-C chemokine recepto 99.7 4.6E-17 1.6E-21 125.1 5.9 107 12-120 44-152 (296)
4 3vw7_A Proteinase-activated re 99.7 1.5E-17 5.1E-22 135.6 3.0 106 12-118 53-162 (484)
5 4dkl_A MU-type opioid receptor 99.7 2.2E-17 7.4E-22 133.7 3.4 105 12-117 50-157 (464)
6 3uon_A Human M2 muscarinic ace 99.7 1.2E-16 4E-21 129.6 6.9 106 12-117 56-164 (467)
7 3odu_A C-X-C chemokine recepto 99.7 2.8E-17 9.6E-22 134.5 3.0 105 12-117 81-187 (502)
8 1u19_A Rhodopsin; G protein-co 99.6 6.4E-17 2.2E-21 126.4 4.6 106 12-118 71-179 (349)
9 2z73_A Rhodopsin; visual pigme 99.6 4.6E-17 1.6E-21 132.0 3.6 108 12-119 67-178 (448)
10 3eml_A Human adenosine A2A rec 99.6 8.3E-17 2.8E-21 131.1 4.9 108 12-119 54-162 (488)
11 2rh1_A Beta-2-adrenergic recep 99.6 1.4E-16 4.9E-21 131.1 6.1 105 12-116 73-181 (500)
12 3pbl_A D(3) dopamine receptor, 99.6 5.2E-17 1.8E-21 132.2 2.7 106 12-117 71-183 (481)
13 4amj_A Beta-1 adrenergic recep 99.6 9E-17 3.1E-21 123.6 2.6 105 12-116 44-151 (315)
14 3rze_A Histamine H1 receptor, 99.6 3.1E-16 1.1E-20 126.6 5.6 101 12-112 41-144 (452)
15 4eiy_A Adenosine receptor A2A/ 99.6 2.8E-16 9.5E-21 126.7 4.4 106 12-117 64-170 (447)
16 4ea3_A Fusion protein of nocic 99.6 2.4E-15 8.2E-20 121.6 7.9 104 12-116 158-264 (434)
17 2ks9_A Substance-P receptor; w 99.6 1.4E-15 4.9E-20 119.7 5.9 101 12-114 65-168 (364)
18 3sn6_R Lysozyme, beta-2 adrene 99.6 9.5E-16 3.3E-20 126.5 2.9 102 12-113 215-319 (514)
19 4grv_A Neurotensin receptor ty 98.9 7.4E-11 2.5E-15 97.3 -1.5 79 92-182 72-150 (510)
20 2rh1_A Beta-2-adrenergic recep 98.9 2.2E-10 7.6E-15 94.1 -0.4 77 92-182 77-153 (500)
21 3rze_A Histamine H1 receptor, 98.8 6.3E-10 2.2E-14 89.5 -0.2 77 92-182 45-121 (452)
22 3uon_A Human M2 muscarinic ace 98.8 7.7E-10 2.6E-14 89.4 -0.2 77 92-182 60-136 (467)
23 2lnl_A C-X-C chemokine recepto 98.7 3.2E-09 1.1E-13 81.1 1.9 72 93-180 49-120 (296)
24 3vw7_A Proteinase-activated re 98.7 1.5E-09 5.1E-14 88.1 -0.8 76 93-182 58-133 (484)
25 4dkl_A MU-type opioid receptor 98.7 1.1E-09 3.7E-14 88.4 -2.0 75 92-181 54-128 (464)
26 3eml_A Human adenosine A2A rec 98.6 5.6E-09 1.9E-13 84.7 1.2 74 93-182 59-132 (488)
27 4amj_A Beta-1 adrenergic recep 98.6 5.9E-10 2E-14 85.3 -5.0 76 92-181 48-123 (315)
28 1u19_A Rhodopsin; G protein-co 98.6 4.2E-09 1.4E-13 81.8 -0.6 74 92-179 75-148 (349)
29 4ea3_A Fusion protein of nocic 98.6 3.6E-09 1.2E-13 85.3 -1.5 76 92-182 162-237 (434)
30 2ks9_A Substance-P receptor; w 98.6 5.4E-09 1.8E-13 81.9 -0.9 74 91-178 68-141 (364)
31 1hll_A Alpha-2A adrenergic rec 98.6 1.5E-08 5.3E-13 51.6 1.1 30 62-91 2-31 (32)
32 3v2y_A Sphingosine 1-phosphate 98.5 9.9E-09 3.4E-13 84.8 0.3 74 93-182 101-174 (520)
33 3sn6_R Lysozyme, beta-2 adrene 98.5 1.9E-09 6.5E-14 88.8 -4.1 76 92-181 219-294 (514)
34 2z73_A Rhodopsin; visual pigme 98.5 9.1E-09 3.1E-13 83.1 -0.1 79 90-182 69-148 (448)
35 3pbl_A D(3) dopamine receptor, 98.5 6.3E-09 2.2E-13 84.4 -1.3 72 93-177 76-147 (481)
36 4eiy_A Adenosine receptor A2A/ 98.5 5.7E-09 1.9E-13 83.8 -1.7 74 92-181 68-141 (447)
37 3odu_A C-X-C chemokine recepto 98.5 4.4E-09 1.5E-13 85.7 -3.6 72 93-180 86-157 (502)
38 1hll_A Alpha-2A adrenergic rec 98.1 1.7E-08 5.8E-13 51.4 -5.1 28 155-182 2-29 (32)
39 2eqq_A GBP, growth-blocking pe 30.1 6.7 0.00023 18.0 -0.7 7 5-11 21-27 (28)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.78 E-value=8.4e-20 Score=150.94 Aligned_cols=108 Identities=19% Similarity=0.301 Sum_probs=98.8
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc-----cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeeccccccc
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL-----PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGR 86 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~-----~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~ 86 (182)
+..|+|++|||++|++++++.+|+.+. .+.|.+|+..|++..++..+...+|++++++|++|||.||++|+++++
T Consensus 68 ~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~ 147 (510)
T 4grv_A 68 STVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKT 147 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccc
Confidence 356999999999999999999998753 467999999999999999999999999999999999999999999999
Q ss_pred ceecceeeeeehHhHHHHHHHHhhhHhhcccee
Q psy17199 87 NKTRKRVILKIAFVWLLSVAMSLPLSLMYSQVI 119 (182)
Q Consensus 87 ~~t~~~~~~~l~~~wi~s~~~~~p~~~~~~~~~ 119 (182)
.+|++++...++++|++++++++|+.+.+....
T Consensus 148 ~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 180 (510)
T 4grv_A 148 LMSRSRTKKFISAIWLASALLAIPMLFTMGLQN 180 (510)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEE
T ss_pred cccccccceeehHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999988776443
No 2
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.69 E-value=6.1e-18 Score=140.01 Aligned_cols=106 Identities=17% Similarity=0.269 Sum_probs=90.2
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc--cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeeccccccccee
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL--PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNKT 89 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~--~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~t 89 (182)
+..|+|+.|||++|+++++...|..+. ...|..+...|++..++..+...+|++++++|++|||.||+ |++++.+++
T Consensus 96 ~~~~~~l~nLA~aDll~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t 174 (520)
T 3v2y_A 96 RPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSN 174 (520)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------C
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccc
Confidence 467999999999999999988888764 46788999999999999999999999999999999999999 999999999
Q ss_pred cceeeeeehHhHHHHHHHHhhhHhhccce
Q psy17199 90 RKRVILKIAFVWLLSVAMSLPLSLMYSQV 118 (182)
Q Consensus 90 ~~~~~~~l~~~wi~s~~~~~p~~~~~~~~ 118 (182)
++++...++++|++++++++|+.+.+...
T Consensus 175 ~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 203 (520)
T 3v2y_A 175 NFRLFLLISACWVISLILGGLPIMGWNCI 203 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTTTCBCT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeccc
Confidence 99999999999999999999988877754
No 3
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.67 E-value=4.6e-17 Score=125.12 Aligned_cols=107 Identities=22% Similarity=0.269 Sum_probs=90.6
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc--cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeeccccccccee
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL--PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNKT 89 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~--~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~t 89 (182)
+..|+++.|||++|++.+. .+|.... .++|..|+..|+...+.......+|.++++++++|||.++++|++++.+.+
T Consensus 44 t~~n~~i~nLAvaDll~~l-~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~ 122 (296)
T 2lnl_A 44 SVTDVYLLNLALADLLFAL-TLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKR 122 (296)
T ss_dssp STTHHHHHHHHHHHHHHHH-HHHHHHHHHHSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHH
T ss_pred ChHHHHHHHHHHHHHHHHH-hhhHHHhhccCCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhh
Confidence 4689999999999999887 5676543 457999999999999999999999999999999999999999999876544
Q ss_pred cceeeeeehHhHHHHHHHHhhhHhhccceee
Q psy17199 90 RKRVILKIAFVWLLSVAMSLPLSLMYSQVIQ 120 (182)
Q Consensus 90 ~~~~~~~l~~~wi~s~~~~~p~~~~~~~~~~ 120 (182)
++....++.+|+.+.+.+.|+...+...++
T Consensus 123 -~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~ 152 (296)
T 2lnl_A 123 -HLVKFVCLGCWGLSMNLSLPFFLFRQAYHP 152 (296)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTSSCCCC
T ss_pred -hhhHheehHHHHHHHHHhcchhhcceeecC
Confidence 455556778999999999998887765443
No 4
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.67 E-value=1.5e-17 Score=135.57 Aligned_cols=106 Identities=22% Similarity=0.301 Sum_probs=90.0
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc----cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccc
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL----PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRN 87 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~----~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~ 87 (182)
+..|+|+.|||++|++.++ .+|.... .+.|.+++..|++..++..+...+|++++++|++|||.+|++|+++++.
T Consensus 53 ~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~ 131 (484)
T 3vw7_A 53 KPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSW 131 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccc
Confidence 4679999999999999977 4565532 4589999999999999999999999999999999999999999999989
Q ss_pred eecceeeeeehHhHHHHHHHHhhhHhhccce
Q psy17199 88 KTRKRVILKIAFVWLLSVAMSLPLSLMYSQV 118 (182)
Q Consensus 88 ~t~~~~~~~l~~~wi~s~~~~~p~~~~~~~~ 118 (182)
++++++...++++|+++++..+|+.+.+...
T Consensus 132 ~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~ 162 (484)
T 3vw7_A 132 RTLGRASFTCLAIWALAIAGVVPLLLKEQTI 162 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999988876643
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.66 E-value=2.2e-17 Score=133.73 Aligned_cols=105 Identities=29% Similarity=0.451 Sum_probs=94.7
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.++. +|..+. .+.|.+++..|++..++..+...+|++++++|++|||.+|++|+++++.+
T Consensus 50 ~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~ 128 (464)
T 4dkl_A 50 TATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFR 128 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 45799999999999998885 888753 57899999999999999999999999999999999999999999999999
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhhccc
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLMYSQ 117 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~~~~ 117 (182)
+++++...++++|+.+++..+|+.+....
T Consensus 129 ~~~~~~~~~~~~W~~~~~~~~p~~~~~~~ 157 (464)
T 4dkl_A 129 TPRNAKIVNVCNWILSSAIGLPVMFMATT 157 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSBCC
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999988775443
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.65 E-value=1.2e-16 Score=129.62 Aligned_cols=106 Identities=31% Similarity=0.546 Sum_probs=97.6
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.++..+|..+. .+.|.+++..|++..++..+...+|.+++++|++|||.+|++|+++++.+
T Consensus 56 ~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~ 135 (467)
T 3uon_A 56 TVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKR 135 (467)
T ss_dssp SHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 467999999999999999989998753 57899999999999999999999999999999999999999999999999
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhhccc
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLMYSQ 117 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~~~~ 117 (182)
+++++...++++|+++++..+|+.+.+..
T Consensus 136 ~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 164 (467)
T 3uon_A 136 TTKMAGMMIAAAWVLSFILWAPAILFWQF 164 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998877653
No 7
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.65 E-value=2.8e-17 Score=134.53 Aligned_cols=105 Identities=16% Similarity=0.223 Sum_probs=94.8
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc--cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeeccccccccee
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL--PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNKT 89 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~--~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~t 89 (182)
+..|+|+.|||++|++.+ +.+|..+. ...|.+++..|++..++..+...+|++++++|++|||++|++|+++++.++
T Consensus 81 ~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~ 159 (502)
T 3odu_A 81 SMTDKYRLHLSVADLLFV-ITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRK 159 (502)
T ss_dssp CHHHHHHHHHHHHHHHHH-TTHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccc
Confidence 467999999999999996 48888754 357999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeehHhHHHHHHHHhhhHhhccc
Q psy17199 90 RKRVILKIAFVWLLSVAMSLPLSLMYSQ 117 (182)
Q Consensus 90 ~~~~~~~l~~~wi~s~~~~~p~~~~~~~ 117 (182)
++++...++++|+++++.++|+.+....
T Consensus 160 ~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 187 (502)
T 3odu_A 160 LLAEKVVYVGVWIPALLLTIPDFIFANV 187 (502)
T ss_dssp HHHHTHHHHHTHHHHHHTTHHHHHHEEE
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999998776553
No 8
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.65 E-value=6.4e-17 Score=126.40 Aligned_cols=106 Identities=20% Similarity=0.332 Sum_probs=94.6
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.+....|..+. .+.|.+++..|++..++......+|.++++++++|||.+|++|+++++ .
T Consensus 71 ~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~ 149 (349)
T 1u19_A 71 TPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-F 149 (349)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-C
T ss_pred CchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-e
Confidence 457999999999999999988888753 567999999999999999999999999999999999999999999866 7
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhhccce
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLMYSQV 118 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~~~~~ 118 (182)
+++++...++.+|+.+.+...|+.+.+...
T Consensus 150 ~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 179 (349)
T 1u19_A 150 GENHAIMGVAFTWVMALACAAPPLVGWSRY 179 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSGGGTTSSCC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHheeee
Confidence 888888889999999999999988776544
No 9
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.65 E-value=4.6e-17 Score=131.99 Aligned_cols=108 Identities=21% Similarity=0.363 Sum_probs=96.2
Q ss_pred cchhhHhHHHHHHHHHHHHHh-hhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccc
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQ-VPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRN 87 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~-~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~ 87 (182)
+..|++++|||++|++.+++. +|..+. .+.|.+++..|++..++......+|+++++++++|||++|++|++++++
T Consensus 67 ~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~ 146 (448)
T 2z73_A 67 TPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKK 146 (448)
T ss_dssp STTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCC
T ss_pred CccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccce
Confidence 457999999999999998764 676643 5779999999999999999999999999999999999999999999999
Q ss_pred eecceeeeeehHhHHHHHHHHhhhHhhcccee
Q psy17199 88 KTRKRVILKIAFVWLLSVAMSLPLSLMYSQVI 119 (182)
Q Consensus 88 ~t~~~~~~~l~~~wi~s~~~~~p~~~~~~~~~ 119 (182)
.+++++...++++|+.++++++|..+.+....
T Consensus 147 ~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~ 178 (448)
T 2z73_A 147 MSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYT 178 (448)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEE
T ss_pred echhHHHHHHHHHHHHHHHHHHHHHhceeeee
Confidence 99999999999999999999998888765443
No 10
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.64 E-value=8.3e-17 Score=131.05 Aligned_cols=108 Identities=22% Similarity=0.363 Sum_probs=98.4
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc-cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccceec
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL-PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNKTR 90 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~-~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~t~ 90 (182)
+..|+++.|||++|++.++..+|..+. ...|..+...|++..++..+...+|++++++|++|||.+|++|+++++.+++
T Consensus 54 ~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~ 133 (488)
T 3eml_A 54 NVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTG 133 (488)
T ss_dssp SSHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCH
Confidence 467999999999999999989998764 4568889999999999999999999999999999999999999999999999
Q ss_pred ceeeeeehHhHHHHHHHHhhhHhhcccee
Q psy17199 91 KRVILKIAFVWLLSVAMSLPLSLMYSQVI 119 (182)
Q Consensus 91 ~~~~~~l~~~wi~s~~~~~p~~~~~~~~~ 119 (182)
+++...++++|+++++..+|+.+.+....
T Consensus 134 ~~~~~~i~~~W~~s~~~~~~~~~~~~~~~ 162 (488)
T 3eml_A 134 TRAKGIIAICWVLSFAIGLTPMLGWNNCG 162 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHTTGGGTCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999888776543
No 11
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.64 E-value=1.4e-16 Score=131.09 Aligned_cols=105 Identities=28% Similarity=0.505 Sum_probs=94.1
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
...|+|+.|||++|++.++..+|..+. .+.|.+++..|++..++..+...+|++++++|++|||++|++|+++++.+
T Consensus 73 ~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~ 152 (500)
T 2rh1_A 73 TVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLL 152 (500)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeee
Confidence 457999999999999999988998753 57899999999999999999999999999999999999999999999889
Q ss_pred ecceeeeeehHhHHHHHHHHh-hhHhhcc
Q psy17199 89 TRKRVILKIAFVWLLSVAMSL-PLSLMYS 116 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~-p~~~~~~ 116 (182)
+++++...++++|+++++.+. |..+.+.
T Consensus 153 t~~~~~~~i~~~W~~s~~~~~~p~~~~~~ 181 (500)
T 2rh1_A 153 TKNKARVIILMVWIVSGLTSFLPIQMHWY 181 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred cccceeehhhHHHHHHHHHHhcchheeee
Confidence 999999999999999999885 5444443
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.63 E-value=5.2e-17 Score=132.25 Aligned_cols=106 Identities=30% Similarity=0.622 Sum_probs=95.5
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc----cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeeccccc---
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL----PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKF--- 84 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~----~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~--- 84 (182)
+..|+++.|||++|++.++..+|..+. .+.|.+++..|++..++..+...+|++++++|++|||.+|++|++|
T Consensus 71 ~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~ 150 (481)
T 3pbl_A 71 TTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHG 150 (481)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 457999999999999999889998753 3679999999999999999999999999999999999999999998
Q ss_pred ccceecceeeeeehHhHHHHHHHHhhhHhhccc
Q psy17199 85 GRNKTRKRVILKIAFVWLLSVAMSLPLSLMYSQ 117 (182)
Q Consensus 85 ~~~~t~~~~~~~l~~~wi~s~~~~~p~~~~~~~ 117 (182)
.++.+++++...++++|+++++..+|+.+.+..
T Consensus 151 ~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 183 (481)
T 3pbl_A 151 TGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT 183 (481)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHheecc
Confidence 567788889999999999999999998877654
No 13
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.62 E-value=9e-17 Score=123.64 Aligned_cols=105 Identities=30% Similarity=0.489 Sum_probs=94.8
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.+....|..+. .+.|.+++..|++..++......+|.++++++++|||.+|++|+++++..
T Consensus 44 ~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~ 123 (315)
T 4amj_A 44 TLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLM 123 (315)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 457999999999999998878888643 57899999999999999999999999999999999999999999998889
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhhcc
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLMYS 116 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~~~ 116 (182)
+++++...++.+|+.+.+.+.|+.+...
T Consensus 124 ~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 151 (315)
T 4amj_A 124 TRARAKVIICTVWAISALVSFLPIMMHW 151 (315)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred chhhHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998887766543
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.62 E-value=3.1e-16 Score=126.59 Aligned_cols=101 Identities=24% Similarity=0.466 Sum_probs=93.5
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.++..+|..+. .+.|.+++..|++..++..+...+|++++++|++|||.+|++|+++++.+
T Consensus 41 ~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~ 120 (452)
T 3rze_A 41 TVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYR 120 (452)
T ss_dssp CGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCcccccccc
Confidence 468999999999999999889998854 57899999999999999999999999999999999999999999999999
Q ss_pred ecceeeeeehHhHHHHHHHHhhhH
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLS 112 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~ 112 (182)
+++++...++++|+.+++..+|..
T Consensus 121 ~~~~~~~~i~~~W~~~~~~~~p~~ 144 (452)
T 3rze_A 121 TKTRASATILGAWFLSFLWVIPIL 144 (452)
T ss_dssp SHHHHHHHHHHHHHHHGGGHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888743
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.61 E-value=2.8e-16 Score=126.74 Aligned_cols=106 Identities=23% Similarity=0.384 Sum_probs=96.5
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc-cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccceec
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL-PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNKTR 90 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~-~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~t~ 90 (182)
+..|+++.|||++|++.++..+|..+. ...|..+...|++..++......+|++++++|++|||.+|++|+++++.+++
T Consensus 64 ~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~ 143 (447)
T 4eiy_A 64 NVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTG 143 (447)
T ss_dssp SHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhH
Confidence 467999999999999999889998764 4567788899999999999999999999999999999999999999999999
Q ss_pred ceeeeeehHhHHHHHHHHhhhHhhccc
Q psy17199 91 KRVILKIAFVWLLSVAMSLPLSLMYSQ 117 (182)
Q Consensus 91 ~~~~~~l~~~wi~s~~~~~p~~~~~~~ 117 (182)
+++...++++|+.+++.++|+.+.+..
T Consensus 144 ~~~~~~i~~~Wi~s~~~~~~~~~~~~~ 170 (447)
T 4eiy_A 144 TRAKGIIAICWVLSFAIGLTPMLGWNN 170 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGGTCSS
T ss_pred HHHHHHHhHHHHHHHHHHHhhhheecc
Confidence 999999999999999999998887654
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.58 E-value=2.4e-15 Score=121.60 Aligned_cols=104 Identities=25% Similarity=0.403 Sum_probs=86.6
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++. ...+|..+. .+.|.+++..|++..++......+|.+++++|++|||.+|++|+++++.+
T Consensus 158 ~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~ 236 (434)
T 4ea3_A 158 TATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVR 236 (434)
T ss_dssp CHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred chhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEccccccccc
Confidence 46799999999999988 447787643 56799999999999999999999999999999999999999999999999
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhhcc
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLMYS 116 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~~~ 116 (182)
+++++...++.+|+.+.+.++|..+...
T Consensus 237 t~~~~~~~i~~~W~~s~~~~~p~~~~~~ 264 (434)
T 4ea3_A 237 TSSKAQAVNVAIWALASVVGVPVAIMGS 264 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred chhhhHHhhhhhhhHHHHHHhhHheeee
Confidence 9999999999999999999998766543
No 17
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.58 E-value=1.4e-15 Score=119.67 Aligned_cols=101 Identities=15% Similarity=0.287 Sum_probs=89.1
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|+++.|||++|++.+....|..+. .+.|.+++..|++..++......+|.++++++++|||.+|++|++++ .
T Consensus 65 ~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~ 142 (364)
T 2ks9_A 65 TVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--L 142 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--C
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--c
Confidence 467999999999999998888888643 57899999999999999999999999999999999999999999975 5
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHhh
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSLM 114 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~~ 114 (182)
++++....++.+|+.+.+..+|....
T Consensus 143 ~~~~~~~~i~~~W~~s~~~~~p~~~~ 168 (364)
T 2ks9_A 143 SATATKVVICVIWVLALLLAFPQGYY 168 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred ccchHHHHHHHHHHHHHHHHhHHHHH
Confidence 77777788899999999998886543
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.55 E-value=9.5e-16 Score=126.52 Aligned_cols=102 Identities=27% Similarity=0.450 Sum_probs=92.9
Q ss_pred cchhhHhHHHHHHHHHHHHHhhhhhhc---cccccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhheeecccccccce
Q psy17199 12 DHLFIIFTHLQLLHFLLCHFQVPLCCL---PGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLKYPIKFGRNK 88 (182)
Q Consensus 12 ~~~n~~l~~La~~Dl~~~~~~~p~~~~---~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iav~Ry~ai~~pl~~~~~~ 88 (182)
+..|++++|||++|++.++..+|..+. .+.|.+++..|++..++..+...+|++++++|++|||++|++|+++++++
T Consensus 215 ~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~ 294 (514)
T 3sn6_R 215 TVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLL 294 (514)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhc
Confidence 468999999999999999888888753 57899999999999999999999999999999999999999999999889
Q ss_pred ecceeeeeehHhHHHHHHHHhhhHh
Q psy17199 89 TRKRVILKIAFVWLLSVAMSLPLSL 113 (182)
Q Consensus 89 t~~~~~~~l~~~wi~s~~~~~p~~~ 113 (182)
+++++...++++|+.+++.+.++..
T Consensus 295 t~~~~~~~i~~~Wi~s~l~~~~p~~ 319 (514)
T 3sn6_R 295 TKNKARVIILMVWIVSGLTSFLPIQ 319 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998865553
No 19
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=98.91 E-value=7.4e-11 Score=97.33 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=67.1
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..++.+|..+..... ..+.|.+|+..|++..++..++..+|++++++|++|||+||
T Consensus 72 ~~i~~La~aDll~~~~~~p~~~~~~~~------------~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai 139 (510)
T 4grv_A 72 YHLGSLALSDLLILLLAMPVELYNFIW------------VHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAI 139 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT------------CCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------hCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEE
Confidence 356789999999888888876654311 23669999999999999999999999999999999999999
Q ss_pred ecccccccCCC
Q psy17199 172 KYPIKFGRYFP 182 (182)
Q Consensus 172 ~~pl~~~~~~~ 182 (182)
++|++++++++
T Consensus 140 ~~P~~~~~~~t 150 (510)
T 4grv_A 140 CHPFKAKTLMS 150 (510)
T ss_dssp HSCCCCCCCCC
T ss_pred ecccccccccc
Confidence 99999987654
No 20
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=98.86 E-value=2.2e-10 Score=94.10 Aligned_cols=77 Identities=29% Similarity=0.531 Sum_probs=67.5
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|..+... ..+.|.+++..|++..++..+...++++++++|++|||+||
T Consensus 77 ~~l~nLAiaDll~~~~~~p~~~~~~--------------~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI 142 (500)
T 2rh1_A 77 YFITSLACADLVMGLAVVPFGAAHI--------------LMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 142 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHH--------------HHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------HhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 3677899999999888888776655 44679999999999999999999999999999999999999
Q ss_pred ecccccccCCC
Q psy17199 172 KYPIKFGRYFP 182 (182)
Q Consensus 172 ~~pl~~~~~~~ 182 (182)
++|++|+++++
T Consensus 143 ~~Pl~~~~~~t 153 (500)
T 2rh1_A 143 TSPFKYQSLLT 153 (500)
T ss_dssp HSSSTTSCSSC
T ss_pred eccCcCCeeec
Confidence 99999887653
No 21
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.78 E-value=6.3e-10 Score=89.54 Aligned_cols=77 Identities=26% Similarity=0.586 Sum_probs=68.1
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|..+... ..+.|.+++..|++..++......+++++++++++|||++|
T Consensus 45 ~~l~~La~~Dll~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 110 (452)
T 3rze_A 45 LYIVSLSVADLIVGAVVMPMNILYL--------------LMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSV 110 (452)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHH--------------HSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------HcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 3677899999999888888877665 45789999999999999999999999999999999999999
Q ss_pred ecccccccCCC
Q psy17199 172 KYPIKFGRYFP 182 (182)
Q Consensus 172 ~~pl~~~~~~~ 182 (182)
++|++|+++++
T Consensus 111 ~~P~~~~~~~~ 121 (452)
T 3rze_A 111 QQPLRYLKYRT 121 (452)
T ss_dssp HCSCCTTTTSS
T ss_pred eCccccccccc
Confidence 99999877653
No 22
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=98.76 E-value=7.7e-10 Score=89.38 Aligned_cols=77 Identities=32% Similarity=0.640 Sum_probs=67.7
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|..+... ..+.|.+++..|++..++..+...+++++++++++|||+||
T Consensus 60 ~~l~~La~aDll~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai 125 (467)
T 3uon_A 60 YFLFSLACADLIIGVFSMNLYTLYT--------------VIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCV 125 (467)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHH--------------HSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------hcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3677899999999888888777665 45679999999999999999999999999999999999999
Q ss_pred ecccccccCCC
Q psy17199 172 KYPIKFGRYFP 182 (182)
Q Consensus 172 ~~pl~~~~~~~ 182 (182)
++|++|+.+++
T Consensus 126 ~~P~~~~~~~~ 136 (467)
T 3uon_A 126 TKPLTYPVKRT 136 (467)
T ss_dssp HCTTTSGGGCC
T ss_pred hcccccccccc
Confidence 99999877653
No 23
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.71 E-value=3.2e-09 Score=81.10 Aligned_cols=72 Identities=24% Similarity=0.273 Sum_probs=61.1
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++..+ .+|+..... ...|..++..|+...+.......+|+.+++++++|||.||+
T Consensus 49 ~i~nLAvaDll~~l-~~p~~~~~~---------------~~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~ 112 (296)
T 2lnl_A 49 YLLNLALADLLFAL-TLPIWAASK---------------VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIV 112 (296)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHH---------------HSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHH-hhhHHHhhc---------------cCCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhh
Confidence 67789999988764 566655433 25699999999999999999999999999999999999999
Q ss_pred cccccccC
Q psy17199 173 YPIKFGRY 180 (182)
Q Consensus 173 ~pl~~~~~ 180 (182)
+|+|++..
T Consensus 113 ~P~~~~~~ 120 (296)
T 2lnl_A 113 HATRTLTQ 120 (296)
T ss_dssp SCSSSSCC
T ss_pred hccccchh
Confidence 99988754
No 24
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=98.68 E-value=1.5e-09 Score=88.14 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=59.1
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++..+ .+|+...... ..+.|.+++..|++..++......++++++++|++|||+||+
T Consensus 58 ~l~~La~aDll~~~-~~~~~~~~~~-------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~ 123 (484)
T 3vw7_A 58 YMLHLATADVLFVS-VLPFKISYYF-------------SGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVV 123 (484)
T ss_dssp HHHHHHHHHHHHHT-THHHHHHHHH-------------TTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHH-------------hcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEE
Confidence 67789999998754 4665554441 224799999999999999999999999999999999999999
Q ss_pred cccccccCCC
Q psy17199 173 YPIKFGRYFP 182 (182)
Q Consensus 173 ~pl~~~~~~~ 182 (182)
+|++++++++
T Consensus 124 ~P~~~~~~~t 133 (484)
T 3vw7_A 124 YPMQSLSWRT 133 (484)
T ss_dssp CCC-----CC
T ss_pred cccccccccc
Confidence 9999876553
No 25
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=98.67 E-value=1.1e-09 Score=88.39 Aligned_cols=75 Identities=29% Similarity=0.513 Sum_probs=64.5
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+. +|..+... ..+.|.+++..|++..++......++++++++|++|||+||
T Consensus 54 ~~l~~La~~Dll~~~~-~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 118 (464)
T 4dkl_A 54 IYIFNLALADALATST-LPFQSVNY--------------LMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAV 118 (464)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHH--------------HHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHH--------------HhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3677899999987765 77766655 45779999999999999999999999999999999999999
Q ss_pred ecccccccCC
Q psy17199 172 KYPIKFGRYF 181 (182)
Q Consensus 172 ~~pl~~~~~~ 181 (182)
++|++|++++
T Consensus 119 ~~P~~~~~~~ 128 (464)
T 4dkl_A 119 CHPVKALDFR 128 (464)
T ss_dssp HCHHHHHHHC
T ss_pred hccccccccc
Confidence 9999987554
No 26
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.63 E-value=5.6e-09 Score=84.66 Aligned_cols=74 Identities=20% Similarity=0.453 Sum_probs=64.3
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++..+..+|..+... ..|..+...|++..++..+...++++++++|++|||++|+
T Consensus 59 ~l~~La~aDll~~~~~~p~~~~~~----------------~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~ 122 (488)
T 3eml_A 59 FVVSLAAADIAVGVLAIPFAITIS----------------TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIR 122 (488)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHT----------------TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----------------ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEe
Confidence 677899999999888888766544 3477788999999999999999999999999999999999
Q ss_pred cccccccCCC
Q psy17199 173 YPIKFGRYFP 182 (182)
Q Consensus 173 ~pl~~~~~~~ 182 (182)
+|++|+++++
T Consensus 123 ~P~~~~~~~~ 132 (488)
T 3eml_A 123 IPLRYNGLVT 132 (488)
T ss_dssp CGGGSTTTSC
T ss_pred cccccccccC
Confidence 9999887653
No 27
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.61 E-value=5.9e-10 Score=85.30 Aligned_cols=76 Identities=30% Similarity=0.550 Sum_probs=64.7
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|...... ..+.|..++..|+....+......+|+.+++++++|||.||
T Consensus 48 ~ll~~LaiaDll~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 113 (315)
T 4amj_A 48 LFITSLACADLVVGLLVVPFGATLV--------------VRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAI 113 (315)
T ss_dssp HHHHHHHHHHHHCCCCCHHHHHHHH--------------HHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHH--------------hcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4667889999988777777665544 44679999999999999999999999999999999999999
Q ss_pred ecccccccCC
Q psy17199 172 KYPIKFGRYF 181 (182)
Q Consensus 172 ~~pl~~~~~~ 181 (182)
++|+++++++
T Consensus 114 ~~P~~~~~~~ 123 (315)
T 4amj_A 114 TSPFRYQSLM 123 (315)
T ss_dssp HCHHHHHHHC
T ss_pred cccccccccc
Confidence 9999887544
No 28
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=98.59 E-value=4.2e-09 Score=81.84 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=64.0
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|...... ..+.|..++..|+....+......+++++++++++|||+||
T Consensus 75 ~ll~~Lai~Dll~~~~~~~~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI 140 (349)
T 1u19_A 75 YILLNLAVADLFMVFGGFTTTLYTS--------------LHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVV 140 (349)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHH--------------HHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHH--------------hcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 4677899999998887788766544 34669999999999999999999999999999999999999
Q ss_pred eccccccc
Q psy17199 172 KYPIKFGR 179 (182)
Q Consensus 172 ~~pl~~~~ 179 (182)
++|+++++
T Consensus 141 ~~P~~~~~ 148 (349)
T 1u19_A 141 CKPMSNFR 148 (349)
T ss_dssp TCCSSSCC
T ss_pred eCCcccee
Confidence 99998765
No 29
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=98.57 E-value=3.6e-09 Score=85.28 Aligned_cols=76 Identities=28% Similarity=0.415 Sum_probs=58.8
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++. .+.+|...... ..+.|..++..|+...++......+++++++++++|||+||
T Consensus 162 ~ll~~LAvsDll~-~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 226 (434)
T 4ea3_A 162 IYIFNLALADTLV-LLTLPFQGTDI--------------LLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAI 226 (434)
T ss_dssp HHHHHHHHHHHHH-HTTHHHHHHHH--------------HHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhHHHHHHH--------------HhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEE
Confidence 3677889999877 55677666554 44679999999999999999999999999999999999999
Q ss_pred ecccccccCCC
Q psy17199 172 KYPIKFGRYFP 182 (182)
Q Consensus 172 ~~pl~~~~~~~ 182 (182)
++|++++++++
T Consensus 227 ~~Pl~~~~~~t 237 (434)
T 4ea3_A 227 CHPIRALDVRT 237 (434)
T ss_dssp HCC-------C
T ss_pred Ecccccccccc
Confidence 99999877653
No 30
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=98.56 E-value=5.4e-09 Score=81.91 Aligned_cols=74 Identities=18% Similarity=0.315 Sum_probs=63.5
Q ss_pred ceeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeee
Q psy17199 91 KRVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLS 170 (182)
Q Consensus 91 ~~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~a 170 (182)
...+.+++++|++..+..+|..+... ..+.|..++..|+...++......+++++++++++|||+|
T Consensus 68 ~~~l~~LaiaDll~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~a 133 (364)
T 2ks9_A 68 NYFLVNLAFAEASMAAFNTVVNFTYA--------------VHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMA 133 (364)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHH--------------HHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------------HcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999988877788766554 3467999999999999999999999999999999999999
Q ss_pred eecccccc
Q psy17199 171 LKYPIKFG 178 (182)
Q Consensus 171 i~~pl~~~ 178 (182)
|++|++++
T Consensus 134 I~~P~~~~ 141 (364)
T 2ks9_A 134 IIHPLQPR 141 (364)
T ss_dssp HHCCCTTS
T ss_pred Hhhhcccc
Confidence 99999875
No 31
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.55 E-value=1.5e-08 Score=51.56 Aligned_cols=30 Identities=43% Similarity=0.839 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhhheeecccccccceecc
Q psy17199 62 ASIMHLCTISVDRYLSLKYPIKFGRNKTRK 91 (182)
Q Consensus 62 ~s~~~l~~iav~Ry~ai~~pl~~~~~~t~~ 91 (182)
+|++++++|++|||.+|++|++++..++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999998777665
No 32
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=98.54 E-value=9.9e-09 Score=84.76 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=57.8
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++..+...|..+... .+.|..+...|.+..++..+...++++++++|++|||+||+
T Consensus 101 ~l~nLA~aDll~~~~~~p~~~~~~---------------~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~ 165 (520)
T 3v2y_A 101 FIGNLALSDLLAGVAYTANLLLSG---------------ATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML 165 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSG---------------GGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc---------------ccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe
Confidence 677899999999887777655442 25689999999999999999999999999999999999999
Q ss_pred cccccccCCC
Q psy17199 173 YPIKFGRYFP 182 (182)
Q Consensus 173 ~pl~~~~~~~ 182 (182)
|++++++++
T Consensus 166 -p~~~~~~~t 174 (520)
T 3v2y_A 166 -KMKLHNGSN 174 (520)
T ss_dssp -C-------C
T ss_pred -ccccccccc
Confidence 999877653
No 33
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.54 E-value=1.9e-09 Score=88.78 Aligned_cols=76 Identities=29% Similarity=0.512 Sum_probs=65.5
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|..+... ..+.|.+++..|++..++......+++++++++++|||++|
T Consensus 219 ~ll~nLAiaDll~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI 284 (514)
T 3sn6_R 219 YFITSLACADLVMGLAVVPFGAAHI--------------LTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 284 (514)
T ss_dssp HHHHHHHHHHHTTTTTHHHHHHHHH--------------HHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHH--------------HcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3677899999988877788766555 44679999999999999999999999999999999999999
Q ss_pred ecccccccCC
Q psy17199 172 KYPIKFGRYF 181 (182)
Q Consensus 172 ~~pl~~~~~~ 181 (182)
++|+++++++
T Consensus 285 ~~Pl~~~~~~ 294 (514)
T 3sn6_R 285 TSPFKYQSLL 294 (514)
T ss_dssp HSHHHHHHHC
T ss_pred CCccccchhc
Confidence 9999987654
No 34
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=98.53 E-value=9.1e-09 Score=83.07 Aligned_cols=79 Identities=22% Similarity=0.329 Sum_probs=65.1
Q ss_pred cceeeeeehHhHHHHHHHH-hhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeee
Q psy17199 90 RKRVILKIAFVWLLSVAMS-LPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRY 168 (182)
Q Consensus 90 ~~~~~~~l~~~wi~s~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry 168 (182)
....+.+++++|++..+.. +|..+... ..+.|.+++..|++...+...+..+++++++++++|||
T Consensus 69 ~~~ll~~LaiaDll~~~~~~~p~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy 134 (448)
T 2z73_A 69 ANMFIINLAFSDFTFSLVNGFPLMTISC--------------FLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRY 134 (448)
T ss_dssp THHHHHHHHHHHHHHHHHHSTTHHHHHH--------------HTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhccHHHHHH--------------hcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446778999999887664 66555443 34678999999999999999999999999999999999
Q ss_pred eeeecccccccCCC
Q psy17199 169 LSLKYPIKFGRYFP 182 (182)
Q Consensus 169 ~ai~~pl~~~~~~~ 182 (182)
++|++|++++++++
T Consensus 135 ~aI~~P~~~~~~~~ 148 (448)
T 2z73_A 135 NVIGRPMAASKKMS 148 (448)
T ss_dssp HHTTSCTTTCCCCC
T ss_pred Hhccccccccceec
Confidence 99999999876653
No 35
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=98.52 E-value=6.3e-09 Score=84.37 Aligned_cols=72 Identities=31% Similarity=0.669 Sum_probs=62.3
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++..+..+|..+.... ..+.|.+++..|++..++..+...++++++++|++|||+||+
T Consensus 76 ~l~~La~aDll~~~~~~p~~~~~~~-------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~ 142 (481)
T 3pbl_A 76 LVVSLAVADLLVATLVMPWVVYLEV-------------TGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVV 142 (481)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHH-------------TTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------------hcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6678999999998888887665441 125699999999999999999999999999999999999999
Q ss_pred ccccc
Q psy17199 173 YPIKF 177 (182)
Q Consensus 173 ~pl~~ 177 (182)
+|++|
T Consensus 143 ~P~~~ 147 (481)
T 3pbl_A 143 MPVHY 147 (481)
T ss_dssp SHHHH
T ss_pred ccccc
Confidence 99988
No 36
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=98.52 E-value=5.7e-09 Score=83.81 Aligned_cols=74 Identities=20% Similarity=0.444 Sum_probs=63.0
Q ss_pred eeeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeee
Q psy17199 92 RVILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSL 171 (182)
Q Consensus 92 ~~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai 171 (182)
..+.+++++|++..+..+|..+... ..|..+...|++..++......+++++++++++|||++|
T Consensus 68 ~~l~~La~~Dll~~~~~~p~~~~~~----------------~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI 131 (447)
T 4eiy_A 68 YFVVSLAAADIAVGVLAIPFAITIS----------------TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 131 (447)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHH----------------TTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------------cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEE
Confidence 3677899999999888888766544 346667889999999999999999999999999999999
Q ss_pred ecccccccCC
Q psy17199 172 KYPIKFGRYF 181 (182)
Q Consensus 172 ~~pl~~~~~~ 181 (182)
++|++|++++
T Consensus 132 ~~P~~~~~~~ 141 (447)
T 4eiy_A 132 RIPLRYNGLV 141 (447)
T ss_dssp HCHHHHHHHS
T ss_pred ecccccchhh
Confidence 9999887554
No 37
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=98.47 E-value=4.4e-09 Score=85.74 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=61.1
Q ss_pred eeeeehHhHHHHHHHHhhhHhhccceeeeeeeceeEEEEeeeccccchhhHHHHHHHHHHhhhccceeeEEEeeeeeeee
Q psy17199 93 VILKIAFVWLLSVAMSLPLSLMYSQVIQLLHLDFGLIMILGYFPLPPVYCLTWICLDVLFCTASIMHLCTISVDRYLSLK 172 (182)
Q Consensus 93 ~~~~l~~~wi~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~si~~l~~isi~Ry~ai~ 172 (182)
.+.+++++|++.. +.+|..+... ...|.+++..|++..++..+...++++++++|++|||+||+
T Consensus 86 ~l~~La~~Dll~~-~~~p~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~ 149 (502)
T 3odu_A 86 YRLHLSVADLLFV-ITLPFWAVDA---------------VANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV 149 (502)
T ss_dssp HHHHHHHHHHHHH-TTHHHHHHHH---------------HTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHH---------------hcCCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 6678899999884 5677655443 24699999999999999999999999999999999999999
Q ss_pred cccccccC
Q psy17199 173 YPIKFGRY 180 (182)
Q Consensus 173 ~pl~~~~~ 180 (182)
+|+++++.
T Consensus 150 ~P~~~~~~ 157 (502)
T 3odu_A 150 HATNSQRP 157 (502)
T ss_dssp CTTSCHHH
T ss_pred cccccccc
Confidence 99987654
No 38
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.11 E-value=1.7e-08 Score=51.39 Aligned_cols=28 Identities=43% Similarity=0.744 Sum_probs=24.3
Q ss_pred hccceeeEEEeeeeeeeecccccccCCC
Q psy17199 155 ASIMHLCTISVDRYLSLKYPIKFGRYFP 182 (182)
Q Consensus 155 ~si~~l~~isi~Ry~ai~~pl~~~~~~~ 182 (182)
+|+++++++++|||+||++|++++..++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t 29 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRT 29 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccC
Confidence 4677889999999999999999987654
No 39
>2eqq_A GBP, growth-blocking peptide, long form; cytokine; NMR {Mythimna separata} SCOP: j.8.1.1 PDB: 2eqt_A
Probab=30.05 E-value=6.7 Score=17.96 Aligned_cols=7 Identities=71% Similarity=1.075 Sum_probs=5.5
Q ss_pred ceeEEee
Q psy17199 5 PTFYIGI 11 (182)
Q Consensus 5 ~~~~~~~ 11 (182)
||||+-|
T Consensus 21 ptfy~~i 27 (28)
T 2eqq_A 21 PTFYQLI 27 (28)
T ss_dssp ESSCCSC
T ss_pred ceEEEEe
Confidence 8898765
Done!