RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17200
         (177 letters)



>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket
           (Vespula vulgaris), Ves v 5 [TaxId: 7454]}
          Length = 209

 Score = 76.1 bits (186), Expect = 3e-18
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
            +     ++G+N+  T S      DP       V  W  E+  YN    P    +     
Sbjct: 106 CRDVAKYQVGQNVALTGSTAAKYDDP----VKLVKMWEDEVKDYN----PKKKFSGNDFL 157

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
             GH+TQ+VW +++ +G G  +Y+      + +VCNY P+GN   
Sbjct: 158 KTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKN 202


>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein
           (SteCRISP) {Chinese green tree viper (Trimeresurus
           stejnegeri) [TaxId: 39682]}
          Length = 164

 Score = 64.9 bits (157), Expect = 3e-14
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           +   G K GEN++ +               D + +W+ E   +        +  D     
Sbjct: 66  RVIEGIKCGENIYMSPYPMK--------WTDIIHAWHDEYKDFKY-----GVGADPPNAV 112

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLK 113
            GH+TQ+VW  S  +G   +    +    Y  VC Y PAGN +G  A+    
Sbjct: 113 TGHYTQIVWYKSYRIGCAAAYC-PSSPYSYFFVCQYCPAGNFIGKTATPYTS 163


>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 149

 Score = 56.8 bits (136), Expect = 2e-11
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 12/86 (13%)

Query: 30  VEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTA 89
            ++  D WYSEI  YN      T  T       GHFT +VW++++ +G G +        
Sbjct: 73  GKEVADRWYSEIKNYNFQQPGFTSGT-------GHFTAMVWKNTKKMGVGKASASDGS-- 123

Query: 90  VYIVVCNYDPAGNVVG--LYASNVLK 113
              VV  Y PAGNVV    +  NVL 
Sbjct: 124 -SFVVARYFPAGNVVNEGFFEENVLP 148


>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato
           (Lycopersicon esculentum), P14a [TaxId: 4081]}
          Length = 135

 Score = 50.6 bits (120), Expect = 3e-09
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 30  VEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTA 89
              AV  W SE  +YN   N              H+TQ+VWR+S  LG G +R       
Sbjct: 64  GRAAVQLWVSERPSYNYATNQCVGGKKCR-----HYTQVVWRNSVRLGCGRARCNNGW-- 116

Query: 90  VYIVVCNYDPAGNVVG 105
            + + CNYDP GN +G
Sbjct: 117 -WFISCNYDPVGNWIG 131


>d2d8ra1 g.39.1.16 (A:8-93) THAP domain-containing protein 2
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 86

 Score = 24.3 bits (52), Expect = 4.8
 Identities = 3/23 (13%), Positives = 6/23 (26%)

Query: 45 NDYGNPDTINTDTSRFCIGHFTQ 67
                + +    +  C  HF  
Sbjct: 37 RLVRRKNFVPGKHTFLCSKHFEA 59


>d1uw6a_ b.96.1.1 (A:) Acetylcholine binding protein (ACHBP) {Great
           pond snail (Lymnaea stagnalis) [TaxId: 6523]}
          Length = 208

 Score = 24.7 bits (53), Expect = 6.7
 Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 36  SWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFG-ISRYVYNGTAVYIVV 94
           +W      +N   +PD ++   S   +             +    ++R V +G  +Y+  
Sbjct: 58  TWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPS 117

Query: 95  CNY 97
              
Sbjct: 118 IRQ 120


>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1
           GatZ {Escherichia coli [TaxId: 562]}
          Length = 420

 Score = 24.4 bits (53), Expect = 8.7
 Identities = 5/24 (20%), Positives = 8/24 (33%)

Query: 145 YFHDDDGNIIDLEGNVYVDTARYY 168
           Y+     + +        D  RYY
Sbjct: 329 YYRTGFNDSLLDIRYSLSDRIRYY 352


>d1jnia_ a.138.1.3 (A:) Periplasmic nitrate reductase subunit NapB
           {Haemophilus influenzae [TaxId: 727]}
          Length = 68

 Score = 23.2 bits (50), Expect = 9.3
 Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 5/42 (11%)

Query: 127 CPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYY 168
           C        +  T+   T+F D DG +            RY+
Sbjct: 25  CHSPENSRLSGATRISPTHFMDRDGKVGS-----SSSPRRYF 61


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 743,713
Number of extensions: 35353
Number of successful extensions: 160
Number of sequences better than 10.0: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 17
Length of query: 177
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 97
Effective length of database: 1,309,196
Effective search space: 126992012
Effective search space used: 126992012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.4 bits)