Query psy17207
Match_columns 123
No_of_seqs 155 out of 1327
Neff 8.0
Searched_HMMs 29240
Date Sat Aug 17 00:37:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mtr_A N-CAM-1, NCAM-1, neural 99.5 6.4E-13 2.2E-17 92.9 11.7 97 7-107 65-166 (215)
2 2nzi_A Titin; IG-domain, FNIII 99.4 1.1E-11 3.8E-16 90.1 14.5 101 2-105 144-250 (305)
3 2jll_A NCAM2, neural cell adhe 99.3 1.2E-10 4E-15 87.3 13.4 95 7-104 147-246 (389)
4 3knb_B Obscurin-like protein 1 99.2 1.6E-11 5.4E-16 78.7 5.9 51 2-52 53-103 (107)
5 2cqv_A MLCK, myosin light chai 99.2 1.7E-10 5.8E-15 73.6 8.0 58 2-59 47-106 (114)
6 3knb_A Titin; IG-like, titin, 99.1 1.5E-10 5.1E-15 73.1 6.8 46 7-52 52-97 (100)
7 2yuz_A Myosin-binding protein 99.1 2.2E-10 7.4E-15 72.3 6.8 54 2-55 45-98 (100)
8 4fa8_A Secreted protein BARF1; 99.1 1.6E-09 5.6E-14 76.3 10.5 76 7-83 58-136 (203)
9 2r15_A Myomesin-1; sarcomeric 99.0 2E-09 6.9E-14 74.1 10.1 85 2-87 43-150 (212)
10 1gxe_A Myosin binding protein 99.0 7.6E-10 2.6E-14 74.3 7.6 49 4-52 89-137 (139)
11 2v44_A NCAM2, neural cell adhe 99.0 5.2E-09 1.8E-13 71.0 10.9 88 2-92 42-133 (189)
12 3qp3_A Titin; I-SET IG-like, s 99.0 1.3E-09 4.3E-14 67.9 7.0 51 2-52 48-98 (103)
13 2edf_A Obscurin; beta-sandwich 99.0 1.6E-09 5.3E-14 67.7 7.2 54 2-57 47-100 (103)
14 1x44_A Myosin-binding protein 99.0 1.3E-09 4.5E-14 68.2 6.7 53 3-57 47-101 (103)
15 3puc_A Titin; I-SET IG-like do 99.0 1.8E-09 6.3E-14 66.5 7.3 51 2-52 46-96 (99)
16 2bk8_A Connectin, M1, titin he 99.0 2E-09 6.8E-14 66.5 7.3 51 2-52 42-92 (97)
17 1nct_A Titin; cell adhesion, g 99.0 1.2E-09 3.9E-14 69.3 6.2 51 2-52 54-104 (106)
18 3b43_A Titin; I-SET IG fold, e 99.0 3.4E-09 1.2E-13 84.2 10.2 81 2-83 424-507 (570)
19 1he7_A High affinity nerve gro 99.0 1.5E-09 5E-14 72.1 6.8 51 2-52 40-97 (126)
20 1waa_A Titin; metal binding pr 99.0 7E-10 2.4E-14 69.2 4.6 41 2-42 44-84 (93)
21 3irg_B Obscurin-like protein 1 99.0 1.3E-09 4.6E-14 68.2 5.9 51 2-52 53-103 (107)
22 1wwb_X Protein (brain derived 98.9 1.9E-09 6.4E-14 68.1 6.3 36 17-52 61-96 (103)
23 1vca_A VCAM-D1,2, human vascul 98.9 8.3E-09 2.8E-13 72.0 10.1 72 14-85 50-123 (202)
24 2e6p_A Obscurin-like protein 1 98.9 1.9E-09 6.5E-14 67.4 5.9 54 2-57 49-102 (104)
25 2lvc_A Obscurin-like protein 1 98.9 9E-10 3.1E-14 68.7 4.1 43 1-43 44-86 (91)
26 2e7c_A Myosin-binding protein 98.9 3.7E-09 1.3E-13 67.7 6.8 47 6-52 67-113 (118)
27 2lu7_A Obscurin-like protein 1 98.9 2.1E-09 7.1E-14 66.1 5.2 42 2-43 35-76 (84)
28 3jz7_A MCAR, CAR, coxsackievir 98.9 8.9E-09 3.1E-13 70.5 9.0 85 6-91 69-158 (214)
29 3irg_A Titin; IG-like, titin, 98.9 4.6E-09 1.6E-13 64.6 6.7 48 5-52 50-97 (100)
30 3b43_A Titin; I-SET IG fold, e 98.9 2.2E-08 7.5E-13 79.5 12.2 82 2-83 45-131 (570)
31 2rik_A Titin; I-SET IG fold, p 98.9 2.7E-08 9.3E-13 71.3 11.6 81 2-83 45-129 (284)
32 1hng_A CD2; T lymphocyte adhes 98.9 9.2E-09 3.2E-13 70.3 8.7 74 5-87 51-128 (176)
33 3mj8_L Stimulatory hamster ant 98.9 1.4E-08 4.7E-13 70.2 9.6 84 5-88 57-150 (213)
34 3lcy_A Titin; A-BAND, IG tande 98.9 1.1E-08 3.7E-13 69.3 8.9 86 2-88 47-137 (197)
35 3nl4_L Antigen binding fragmen 98.9 9.3E-09 3.2E-13 71.1 8.6 85 6-91 59-151 (213)
36 2eny_A Obscurin; beta-sandwich 98.9 4.7E-09 1.6E-13 66.4 6.5 52 2-55 49-100 (104)
37 1moe_A Anti-CEA MAB T84.66; an 98.9 1.7E-08 5.9E-13 71.0 10.1 88 6-93 63-159 (240)
38 2a38_A Titin; Z1Z2, structural 98.9 1.7E-08 5.7E-13 68.5 9.7 80 8-88 53-137 (194)
39 2jll_A NCAM2, neural cell adhe 98.9 9.7E-09 3.3E-13 76.8 9.2 76 6-82 51-129 (389)
40 2dm2_A Palladin; beta-sandwich 98.9 9.6E-09 3.3E-13 64.8 7.8 52 6-57 53-107 (110)
41 1wwc_A Protein (NT-3 growth fa 98.9 4.4E-09 1.5E-13 67.4 6.2 51 3-53 46-100 (118)
42 1g1c_A Immunoglobulin-like dom 98.9 8.6E-09 2.9E-13 63.5 7.3 50 3-52 46-96 (99)
43 2rik_A Titin; I-SET IG fold, p 98.9 2.5E-08 8.4E-13 71.6 10.4 84 3-88 140-226 (284)
44 2v5y_A Receptor-type tyrosine- 98.9 6.2E-09 2.1E-13 85.0 8.0 84 17-104 222-311 (731)
45 1u2h_A APEG-1, aortic preferen 98.8 7.2E-09 2.5E-13 63.9 6.3 46 7-52 51-96 (99)
46 4f80_A Butyrophilin subfamily 98.8 5.6E-09 1.9E-13 73.2 6.5 72 16-87 81-152 (226)
47 2y25_A Myomesin; structural pr 98.8 5.5E-08 1.9E-12 70.5 11.9 83 2-84 148-253 (317)
48 3bp6_B Programmed cell death 1 98.8 1.3E-08 4.5E-13 69.9 8.1 78 4-82 50-132 (202)
49 2y23_A Myomesin; structural pr 98.8 1.7E-08 5.8E-13 73.1 9.0 86 2-88 42-142 (312)
50 1wit_A Twitchin 18TH IGSF modu 98.8 7.7E-09 2.6E-13 63.4 6.0 42 11-52 51-92 (93)
51 3r06_A Anti-mouse CD3epsilon a 98.8 2E-08 7E-13 69.3 8.5 82 6-87 59-147 (213)
52 1epf_A NCAM, protein (neural c 98.8 5.2E-08 1.8E-12 65.9 10.3 81 5-87 48-133 (191)
53 2if7_A SLAM family member 6; N 98.8 1.9E-08 6.5E-13 69.6 8.2 79 7-88 62-144 (193)
54 3rbs_A Myomesin-1; immunoglobu 98.8 2E-08 6.9E-13 70.6 8.4 85 2-88 43-151 (207)
55 1f97_A Junction adhesion molec 98.8 4.2E-08 1.4E-12 67.1 9.8 79 5-88 56-139 (212)
56 3s96_B 3B5H10 FAB light chain; 98.8 1.5E-08 5.1E-13 70.2 7.5 81 7-87 64-156 (218)
57 2cpc_A KIAA0657 protein; immun 98.8 1.8E-08 6E-13 63.7 7.1 51 2-54 52-102 (113)
58 2cr3_A Basic fibroblast growth 98.8 1.6E-08 5.6E-13 62.9 6.8 49 2-54 42-90 (99)
59 2dm3_A KIAA0992 protein, palla 98.8 1.3E-08 4.6E-13 63.9 6.4 55 3-57 50-107 (110)
60 2xzc_L FAB A.17 light chain; i 98.8 3.1E-08 1.1E-12 68.8 8.8 82 6-87 60-149 (216)
61 2ckn_A Basic fibroblast growth 98.8 8.5E-09 2.9E-13 63.7 5.3 47 2-52 48-94 (95)
62 2wim_A N-CAM 2, NCAM2, neural 98.8 2.2E-08 7.4E-13 72.0 8.1 86 2-88 44-132 (291)
63 1lk3_L 9D7 light chain; antige 98.8 3.7E-08 1.3E-12 68.1 9.1 77 6-82 58-140 (210)
64 2edk_A Myosin-binding protein 98.8 4.2E-09 1.4E-13 65.7 3.5 45 8-54 57-101 (101)
65 3d9a_L Light chain of hyhel10 98.8 3.4E-08 1.2E-12 68.2 8.5 74 7-80 60-139 (213)
66 2dlt_A Myosin binding protein 98.8 1.2E-08 4.2E-13 64.1 5.7 51 2-52 47-97 (106)
67 3sob_L Antibody light chain; b 98.8 2.2E-08 7.6E-13 70.0 7.6 82 6-87 82-170 (237)
68 2kkq_A Myotilin; unknown funct 98.8 2.1E-08 7.2E-13 64.4 6.8 47 6-52 60-107 (116)
69 1hnf_A CD2; T lymphocyte adhes 98.8 3.4E-08 1.2E-12 68.5 8.3 75 5-88 56-134 (182)
70 3esu_F Antibody 14B7* light ch 98.8 6.2E-08 2.1E-12 68.6 9.9 90 6-95 62-173 (250)
71 1svz_A Immunoglobulin;, single 98.8 9E-08 3.1E-12 67.8 10.6 88 6-93 64-167 (247)
72 2edh_A Obscurin; structural ge 98.8 5.1E-08 1.8E-12 61.7 8.2 47 2-52 57-103 (113)
73 2va4_A NCAM2, N-CAM 2, neural 98.8 2.7E-08 9.2E-13 67.2 7.3 79 3-83 45-124 (192)
74 2znx_A SCFV; fluorotryptohpan, 98.8 4.5E-08 1.5E-12 69.6 8.8 88 6-93 59-162 (242)
75 2kdg_A Myotilin; immonoglobuli 98.7 3.9E-08 1.3E-12 60.6 7.4 40 13-52 57-96 (100)
76 2yd1_A Tyrosine-protein phosph 98.7 1.1E-07 3.8E-12 65.7 10.4 85 5-91 50-146 (212)
77 2c5d_C AXL oncogene, tyrosine- 98.7 4.7E-08 1.6E-12 66.6 8.4 71 17-88 67-141 (195)
78 1q0x_L FAB 9B1, light chain; a 98.7 7E-08 2.4E-12 66.7 9.2 77 6-82 61-144 (212)
79 2dm7_A KIAA1556 protein; beta- 98.7 5.8E-08 2E-12 60.9 7.9 39 2-40 46-84 (108)
80 1rhf_A Tyrosine-protein kinase 98.7 3.5E-08 1.2E-12 66.4 7.4 82 4-88 44-133 (182)
81 4hwu_A Fibroblast growth facto 98.7 2.1E-08 7.2E-13 61.7 5.7 47 3-53 40-86 (95)
82 1f3r_B FV antibody fragment; I 98.7 1.4E-07 4.9E-12 67.5 10.7 86 6-93 64-177 (257)
83 3ux9_B SCFV antibody; five hel 98.7 1.4E-07 4.8E-12 67.1 10.5 89 5-93 61-174 (256)
84 3tv3_L PGT128 light chain, IG 98.7 4.7E-08 1.6E-12 67.5 7.8 83 5-87 55-146 (211)
85 3b5h_A Cervical EMMPRIN, HAB18 98.7 4.4E-08 1.5E-12 66.1 7.4 47 6-52 134-181 (184)
86 2c1o_A IGK-C protein; FAB frag 98.7 5.6E-08 1.9E-12 69.1 8.3 77 6-82 101-183 (254)
87 3p2t_A Leukocyte immunoglobuli 98.7 3.9E-08 1.4E-12 67.5 7.2 66 15-80 55-126 (196)
88 1fhg_A Telokin; immunoglobulin 98.7 4.5E-08 1.5E-12 65.6 7.3 51 2-52 81-132 (154)
89 1nqb_A Single-chain antibody f 98.7 8.8E-08 3E-12 68.9 9.2 88 6-93 65-164 (256)
90 3m45_A Cell adhesion molecule 98.7 5.7E-08 1.9E-12 60.4 7.1 47 5-52 57-104 (108)
91 2wng_A Tyrosine-protein phosph 98.7 5.7E-08 1.9E-12 71.4 8.1 73 15-87 71-152 (327)
92 2d9q_B Granulocyte colony-stim 98.7 5.2E-08 1.8E-12 71.8 7.9 76 18-94 61-140 (313)
93 3kvq_A Vascular endothelial gr 98.7 2.2E-08 7.5E-13 62.6 5.1 48 3-52 51-98 (108)
94 2wv3_A Neuroplastin; igcam, me 98.7 8.4E-08 2.9E-12 65.2 8.4 48 5-52 140-188 (190)
95 2dav_A SLOW MYBP-C, myosin-bin 98.7 1.1E-07 3.6E-12 63.1 8.5 54 6-59 57-119 (126)
96 2j8h_A Titin, connectin; cardi 98.7 3.6E-08 1.2E-12 67.0 6.5 51 2-52 144-195 (197)
97 2r15_A Myomesin-1; sarcomeric 98.7 4.9E-08 1.7E-12 67.0 7.2 51 2-52 157-208 (212)
98 2ghw_B Anti-SARS SCFV antibody 98.7 2.5E-07 8.4E-12 65.4 11.0 86 6-93 67-173 (247)
99 2yd6_A PTPRD protein; hydrolas 98.7 3.6E-07 1.2E-11 63.2 11.6 75 15-91 60-144 (212)
100 2gjj_A A21 single-chain antibo 98.7 1.7E-07 5.8E-12 67.8 10.3 89 6-94 69-179 (264)
101 2zg1_A Sialic acid-binding IG- 98.7 9.8E-08 3.4E-12 65.8 8.7 75 6-80 68-150 (214)
102 3rbs_A Myomesin-1; immunoglobu 98.7 1.7E-08 5.6E-13 71.0 4.6 49 3-53 158-206 (207)
103 2d3v_A Leukocyte immunoglobuli 98.7 1.2E-07 4.1E-12 65.2 8.8 75 15-92 55-135 (196)
104 2a38_A Titin; Z1Z2, structural 98.7 5E-08 1.7E-12 66.1 6.8 51 2-52 143-193 (194)
105 2cry_A KIN of IRRE-like protei 98.7 9.2E-09 3.1E-13 66.2 2.9 48 6-53 60-112 (122)
106 2yuv_A Myosin-binding protein 98.7 9E-08 3.1E-12 59.4 7.4 47 2-52 47-93 (100)
107 3cx2_A Myosin-binding protein 98.7 3.6E-08 1.2E-12 62.2 5.5 36 17-52 71-106 (108)
108 3sbw_C Programmed cell death 1 98.7 8.3E-08 2.8E-12 66.4 7.8 75 7-82 66-145 (222)
109 3r4d_A CEA-related cell adhesi 98.7 2.7E-07 9.3E-12 63.1 10.2 78 6-88 62-143 (208)
110 1ccz_A Protein (CD58); LFA-3, 98.7 1E-07 3.5E-12 65.0 8.0 74 7-88 51-124 (171)
111 3auv_A SC-DSFV derived from th 98.7 1.1E-07 3.6E-12 69.0 8.4 88 6-93 70-174 (276)
112 2y25_A Myomesin; structural pr 98.6 8.2E-08 2.8E-12 69.6 7.6 51 2-52 262-313 (317)
113 2gi7_A GPVI protein; IG-like d 98.6 1.4E-07 4.9E-12 64.3 8.4 73 17-92 51-129 (184)
114 2xot_A Amphoterin-induced prot 98.6 9.3E-08 3.2E-12 72.3 8.2 63 7-82 294-356 (361)
115 1z9m_A GAPA225; nectin-like, I 98.6 9E-08 3.1E-12 63.4 7.1 51 6-57 90-143 (145)
116 4fa8_A Secreted protein BARF1; 98.6 2.6E-08 8.8E-13 70.1 4.7 44 4-47 152-195 (203)
117 2eo9_A Roundabout homolog 1; b 98.6 7.2E-08 2.5E-12 61.5 6.4 45 5-52 52-96 (118)
118 2wv3_A Neuroplastin; igcam, me 98.6 2.3E-07 7.8E-12 63.0 9.2 72 16-91 54-128 (190)
119 1qok_A MFE-23 recombinant anti 98.6 2.5E-07 8.6E-12 67.3 9.8 85 6-93 91-199 (282)
120 1ugn_A LIR1, leukocyte immunog 98.6 2.6E-07 8.8E-12 63.4 9.4 66 17-82 57-129 (198)
121 2edj_A Roundabout homolog 2; K 98.6 2.6E-08 8.8E-13 61.6 3.8 45 5-52 52-96 (100)
122 1gsm_A Madcam-1, mucosal addre 98.6 2.2E-07 7.7E-12 66.4 9.1 68 15-84 56-125 (210)
123 2yr3_A Myosin light chain kina 98.6 1.2E-07 4E-12 58.5 6.7 36 16-51 62-97 (99)
124 2k1m_A Myosin-binding protein 98.6 1.2E-07 4.3E-12 58.3 6.8 45 2-50 47-91 (95)
125 1dr9_A B7-1 (CD80), T lymphocy 98.6 2.2E-07 7.6E-12 63.6 8.8 72 17-91 64-143 (201)
126 3umt_A SCFV heavy chain and li 98.6 2.6E-07 9E-12 65.9 9.4 86 6-93 67-176 (256)
127 1nfd_E H57 FAB; complex (immun 98.6 1.1E-07 3.9E-12 65.6 7.3 83 6-88 57-149 (212)
128 2ocw_A Polymeric-immunoglobuli 98.6 2E-07 7E-12 73.4 9.6 85 6-92 61-150 (585)
129 2p1y_A Bispecific alpha/beta T 98.6 2.8E-07 9.6E-12 64.7 9.4 86 6-93 60-165 (238)
130 3s35_X Vascular endothelial gr 98.6 6.2E-08 2.1E-12 62.0 5.5 37 16-52 72-108 (122)
131 3juy_B 3B3 single chain varian 98.6 3.2E-07 1.1E-11 65.4 9.8 87 6-93 71-188 (256)
132 1qgc_4 Protein (immunoglobulin 98.6 1.2E-07 4E-12 72.0 7.8 83 6-88 63-152 (438)
133 1e07_A Carcinoembryonic antige 98.6 1.8E-07 6.1E-12 74.7 9.2 84 2-88 506-593 (642)
134 2j8h_A Titin, connectin; cardi 98.6 2.7E-07 9.2E-12 62.6 8.8 81 6-87 49-137 (197)
135 3uto_A Twitchin; kinase, muscl 98.6 7.8E-08 2.7E-12 77.6 6.9 51 2-52 522-572 (573)
136 1nbq_A JAM, junctional adhesio 98.6 6E-08 2E-12 66.2 5.4 78 6-88 60-142 (209)
137 1oll_A NK receptor; immune sys 98.6 4.3E-07 1.5E-11 62.1 9.7 75 15-92 54-134 (188)
138 3bkj_L WO2 IGG2A FAB fragment 98.6 1.5E-07 5.1E-12 67.0 7.7 77 6-82 97-179 (252)
139 3nl4_H Antigen binding fragmen 98.6 2.3E-07 7.8E-12 64.5 8.4 77 6-82 63-149 (215)
140 2va4_A NCAM2, N-CAM 2, neural 98.6 1.5E-07 5E-12 63.5 7.2 47 6-52 145-191 (192)
141 2rcj_C Light chain; immunoglob 98.6 2E-07 6.8E-12 72.7 8.9 82 6-87 58-149 (523)
142 3kld_A Contactin 4, axcam, BIG 98.6 4.8E-08 1.6E-12 73.8 5.1 66 17-83 257-325 (384)
143 2dku_A KIAA1556 protein; beta- 98.6 2.2E-07 7.6E-12 57.7 7.4 52 2-57 47-100 (103)
144 1x9q_A SCFV, 4M5.3 anti-fluore 98.6 1.8E-07 6.1E-12 67.4 8.0 88 6-93 78-191 (268)
145 2ocw_A Polymeric-immunoglobuli 98.6 2.3E-07 7.7E-12 73.1 9.1 74 5-79 391-468 (585)
146 2pet_A Lutheran blood group gl 98.6 2.4E-07 8.3E-12 64.3 8.3 71 19-91 78-156 (231)
147 1oww_A FN, fibronectin first t 98.6 3.1E-07 1.1E-11 57.5 7.9 66 52-122 4-70 (98)
148 2fbo_J V1V2;, variable region- 98.6 1.1E-07 3.6E-12 66.9 6.5 84 6-92 79-173 (250)
149 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.6 3.1E-07 1E-11 65.7 9.0 86 6-94 62-175 (256)
150 1fnl_A Low affinity immunoglob 98.6 1.7E-07 5.9E-12 63.2 7.2 71 16-88 52-123 (175)
151 3vh8_G Killer cell immunoglobu 98.6 3.1E-07 1.1E-11 67.2 9.1 64 16-79 172-244 (316)
152 3gkz_A Anti-methamphetamine si 98.6 6.6E-07 2.2E-11 63.7 10.5 87 6-93 72-180 (257)
153 3d9a_H Heavy chain of hyhel10 98.6 2.4E-07 8.2E-12 64.0 8.0 76 6-82 64-147 (210)
154 2j6e_L IGM, FAB light chain; a 98.6 7.6E-08 2.6E-12 67.3 5.5 83 6-88 79-171 (234)
155 3rbg_A Cytotoxic and regulator 98.6 2E-07 6.7E-12 60.3 7.0 47 5-52 52-99 (124)
156 3khq_A B-cell antigen receptor 98.6 9.1E-08 3.1E-12 63.3 5.5 39 5-43 64-102 (133)
157 1c1e_H Catalytic antibody 1E9 98.6 3.6E-07 1.2E-11 63.4 8.8 82 6-87 65-159 (219)
158 2v5m_A Dscam; neurobiology SPL 98.6 1.1E-07 3.6E-12 71.1 6.3 70 18-88 270-341 (388)
159 1pz5_B Heavy chain of FAB (SYA 98.5 4.7E-07 1.6E-11 63.0 9.0 75 6-80 67-152 (220)
160 3eow_R Poliovirus receptor; im 98.5 1.1E-07 3.8E-12 66.2 5.5 84 6-92 61-154 (221)
161 1f2q_A High affinity immunoglo 98.5 1E-07 3.5E-12 64.3 5.1 71 16-88 49-120 (176)
162 3fku_X Neutralizing antibody F 98.5 1.9E-07 6.4E-12 68.1 6.8 89 6-95 65-181 (280)
163 2edn_A Myosin-binding protein 98.5 1.6E-07 5.3E-12 61.6 5.7 36 17-52 79-114 (118)
164 1op3_H FAB 2G12, heavy chain; 98.5 5.2E-07 1.8E-11 63.4 8.8 77 6-82 65-157 (225)
165 3grw_A Fibroblast growth facto 98.5 1E-06 3.4E-11 61.6 10.2 71 17-88 71-148 (241)
166 1pd6_A Cardiac MYBP-C;, myosin 98.5 1.3E-07 4.5E-12 59.7 5.1 39 2-40 55-94 (104)
167 1qz1_A Neural cell adhesion mo 98.5 1.1E-06 3.7E-11 62.9 10.5 80 6-87 49-133 (291)
168 2iep_A Muscle-specific kinase 98.5 1.6E-07 5.4E-12 63.4 5.7 79 6-87 52-133 (192)
169 2nzi_A Titin; IG-domain, FNIII 98.5 5.3E-07 1.8E-11 65.1 8.9 78 6-83 49-134 (305)
170 3lcy_A Titin; A-BAND, IG tande 98.5 2.1E-07 7.3E-12 62.8 6.3 51 2-52 143-194 (197)
171 1e07_A Carcinoembryonic antige 98.5 7.9E-07 2.7E-11 70.9 10.4 84 2-88 328-415 (642)
172 2yd9_A Receptor-type tyrosine- 98.5 7E-07 2.4E-11 64.8 9.3 78 6-83 49-138 (304)
173 1gl4_B Basement membrane-speci 98.5 1.6E-07 5.4E-12 57.8 5.0 35 18-52 62-96 (98)
174 1za6_B IGG heavy chain; immuno 98.5 4.4E-07 1.5E-11 67.5 8.3 77 6-82 65-149 (344)
175 2o26_X MAST/stem cell growth f 98.5 4.2E-07 1.4E-11 65.4 7.9 87 2-92 132-226 (290)
176 3caf_A Fibroblast growth facto 98.5 1.6E-07 5.6E-12 57.8 5.0 36 17-52 64-99 (100)
177 3uzq_A Anti-dengue MAB 4E11; d 98.5 7.8E-07 2.7E-11 63.3 9.2 88 6-93 66-175 (253)
178 2e6q_A Obscurin-like protein 1 98.5 3.6E-07 1.2E-11 59.2 6.8 52 2-54 46-107 (112)
179 2eo1_A OBSCN protein, cDNA FLJ 98.5 1.8E-07 6E-12 58.1 5.1 39 2-40 50-88 (102)
180 2yd9_A Receptor-type tyrosine- 98.5 4.3E-07 1.5E-11 65.9 7.9 66 18-83 164-235 (304)
181 3sgj_C Human FCG3A receptor; r 98.5 1.3E-07 4.6E-12 65.9 4.9 69 18-88 54-123 (204)
182 1q9r_B S25-2 FAB (IGG1K) heavy 98.5 6.4E-07 2.2E-11 62.4 8.2 77 6-82 67-156 (222)
183 2y23_A Myomesin; structural pr 98.5 1E-07 3.6E-12 68.9 4.2 48 3-52 263-310 (312)
184 3ejj_X Macrophage colony-stimu 98.5 6.5E-07 2.2E-11 64.1 8.4 83 3-88 132-221 (289)
185 3ojm_B Fibroblast growth facto 98.5 1E-06 3.4E-11 60.9 9.0 73 17-91 75-154 (231)
186 2dru_A Chimera of CD48 antigen 98.5 4.7E-07 1.6E-11 62.2 7.3 73 7-88 60-134 (180)
187 3bqu_C 3H6 FAB light chain; be 98.5 6.8E-08 2.3E-12 67.7 2.8 83 6-88 81-170 (233)
188 2e7b_A Obscurin; IG-like domai 98.5 2.2E-07 7.6E-12 57.7 4.9 45 2-50 47-91 (103)
189 1dee_B IGM RF 2A2; FAB-IBP com 98.5 9.8E-07 3.4E-11 61.9 8.8 77 6-82 65-155 (223)
190 1bih_A Hemolin; insect immunit 98.5 2.2E-07 7.5E-12 69.4 5.7 73 16-88 60-135 (395)
191 4fqp_A Poliovirus receptor; im 98.5 2.5E-07 8.6E-12 67.5 5.9 41 18-58 268-308 (313)
192 3qs7_E FL cytokine receptor; i 98.5 2.8E-07 9.7E-12 71.2 6.4 67 17-83 102-169 (423)
193 3pv7_A B7-H6, IG-like domain-c 98.5 4.3E-07 1.5E-11 64.2 6.9 75 17-92 81-157 (248)
194 1wio_A CD4, T-cell surface gly 98.5 5.3E-07 1.8E-11 67.2 7.7 55 17-82 254-310 (363)
195 3ejj_X Macrophage colony-stimu 98.5 2.7E-07 9.4E-12 66.0 5.9 76 14-89 47-125 (289)
196 1uct_A Immunoglobulin alpha FC 98.5 1.4E-06 4.7E-11 61.4 9.4 72 19-92 65-142 (218)
197 4dkd_C Macrophage colony-stimu 98.4 7.2E-07 2.5E-11 63.9 8.1 77 3-82 132-215 (292)
198 2ec8_A MAST/stem cell growth f 98.4 2.3E-07 7.8E-12 72.4 5.8 64 16-83 373-436 (524)
199 1zox_A CLM-1; IG-superfamily, 98.4 3.5E-07 1.2E-11 57.9 5.7 51 6-56 60-112 (113)
200 3dmk_A DOWN syndrome cell adhe 98.4 6.6E-07 2.3E-11 73.3 8.7 87 3-92 661-751 (816)
201 1nkr_A P58-CL42 KIR; inhibitor 98.4 3.6E-06 1.2E-10 57.9 11.3 74 16-92 61-143 (201)
202 1i1r_A GP130, interleukin-6 re 98.4 1.4E-06 4.9E-11 63.7 9.7 83 8-94 56-144 (303)
203 2fbj_H IGA-kappa J539 FAB (hea 98.4 1.4E-06 4.7E-11 61.0 9.1 77 6-82 65-151 (220)
204 3rjd_A High affinity immunoglo 98.4 2E-06 7E-11 60.5 10.1 66 17-82 130-199 (262)
205 2ec8_A MAST/stem cell growth f 98.4 6.5E-07 2.2E-11 69.8 8.1 72 17-88 272-348 (524)
206 4fmk_A Poliovirus receptor-rel 98.4 2.5E-07 8.4E-12 63.2 4.9 68 16-83 81-151 (225)
207 4dkd_C Macrophage colony-stimu 98.4 1.5E-07 5.1E-12 67.5 4.0 83 7-89 40-125 (292)
208 1pko_A Myelin oligodendrocyte 98.4 8E-07 2.7E-11 58.2 7.2 48 6-53 70-120 (139)
209 2qsq_A Carcinoembryonic antige 98.4 3E-07 1E-11 59.2 5.0 45 5-52 62-107 (111)
210 3m8o_H Immunoglobulin A1 heavy 98.4 1.9E-06 6.5E-11 60.0 9.5 76 6-82 67-152 (221)
211 1qgc_4 Protein (immunoglobulin 98.4 1.2E-06 4E-11 66.5 9.0 83 6-88 283-379 (438)
212 2wim_A N-CAM 2, NCAM2, neural 98.4 3.6E-07 1.2E-11 65.5 5.9 48 3-52 235-282 (291)
213 1c5d_H Monoclonal antibody aga 98.4 8.8E-07 3E-11 61.8 7.6 75 6-80 64-149 (215)
214 4fom_A Poliovirus receptor-rel 98.4 9E-07 3.1E-11 64.2 8.0 81 7-87 62-148 (308)
215 3nfj_J T cell receptor beta ch 98.4 8.8E-07 3E-11 62.5 7.7 82 6-87 61-159 (245)
216 1ry7_B FGFR-3, fibroblast grow 98.4 3.3E-07 1.1E-11 67.1 5.6 74 16-91 178-258 (334)
217 1itb_B Type 1 interleukin-1 re 98.4 2.7E-06 9.2E-11 61.8 10.4 66 18-83 162-239 (315)
218 3mj6_A Junctional adhesion mol 98.4 5.8E-07 2E-11 63.9 6.6 81 7-91 71-157 (268)
219 3bae_H WO2 IGG2A FAB fragment 98.4 9.6E-07 3.3E-11 62.1 7.6 75 6-80 66-157 (228)
220 1bih_A Hemolin; insect immunit 98.4 2.8E-07 9.6E-12 68.8 5.0 70 17-88 269-343 (395)
221 2yd6_A PTPRD protein; hydrolas 98.4 6.5E-07 2.2E-11 61.9 6.5 40 7-46 156-195 (212)
222 2v5t_A NCAM2, N-CAM 2, neural 98.4 4.7E-07 1.6E-11 60.8 5.6 48 3-52 139-186 (189)
223 1b6u_A KIR2DL3, P58 killer cel 98.4 3.6E-06 1.2E-10 61.2 10.7 74 16-92 60-142 (257)
224 3p3y_A Neurofascin; IG domains 98.4 5.6E-07 1.9E-11 67.2 6.6 70 17-88 274-346 (404)
225 3u83_A Poliovirus receptor-rel 98.4 1.3E-06 4.4E-11 63.8 8.4 71 18-88 194-267 (331)
226 3oq3_B IFN-alpha/beta binding 98.4 7.5E-07 2.6E-11 65.7 7.0 72 6-81 174-256 (329)
227 1mju_H Immunoglobulin MS6-12; 98.4 1.8E-06 6.2E-11 60.8 8.7 77 6-82 65-150 (227)
228 3o4o_C Interleukin-1 receptor 98.4 1E-06 3.5E-11 64.8 7.7 78 7-86 171-262 (339)
229 3qs7_E FL cytokine receptor; i 98.4 4.5E-07 1.5E-11 70.1 5.9 69 17-87 289-359 (423)
230 1hzh_H IGG, immunoglobulin hea 98.4 1.5E-06 5.2E-11 66.8 8.9 77 6-82 65-161 (457)
231 1bec_A 14.3.D T cell antigen r 98.4 1.6E-06 5.5E-11 61.3 8.3 77 6-82 59-150 (238)
232 1eaj_A Coxsackie virus and ade 98.4 4.6E-07 1.6E-11 57.2 4.9 47 6-52 74-123 (126)
233 3jz7_A MCAR, CAR, coxsackievir 98.4 4.8E-07 1.6E-11 61.7 5.3 37 17-53 175-211 (214)
234 3kld_A Contactin 4, axcam, BIG 98.4 3.4E-07 1.2E-11 69.1 4.9 47 2-52 335-381 (384)
235 4gos_A V-SET domain-containing 98.4 3.7E-07 1.3E-11 59.6 4.4 47 6-52 69-118 (125)
236 2gki_A Nuclease; anti-DNA anti 98.4 2.6E-06 9E-11 62.2 9.5 88 6-93 87-203 (291)
237 2ny1_B T-cell surface glycopro 98.4 6.8E-07 2.3E-11 60.4 5.8 65 17-88 67-131 (184)
238 3o3u_N Maltose-binding peripla 98.4 8.3E-07 2.9E-11 70.1 7.2 80 6-88 423-507 (581)
239 1p6f_A NKP46, natural cytotoxi 98.4 2.4E-06 8.2E-11 61.4 9.0 74 16-92 58-137 (242)
240 3zyj_A Leucine-rich repeat-con 98.4 5.8E-07 2E-11 69.4 6.1 43 7-52 389-431 (440)
241 3laf_A Deleted in colorectal c 98.4 7.5E-07 2.6E-11 66.6 6.6 69 18-88 275-346 (403)
242 4dzb_B Vbeta2 (MAIT T cell rec 98.4 1.3E-06 4.4E-11 61.6 7.4 76 7-82 65-154 (246)
243 2x1w_L Vascular endothelial gr 98.4 1.8E-06 6.2E-11 60.0 8.0 71 18-88 64-141 (213)
244 3pl6_D MBP peptide / T-cell re 98.4 9.3E-07 3.2E-11 63.3 6.6 81 7-87 88-181 (268)
245 2rcj_C Light chain; immunoglob 98.4 2.4E-06 8.2E-11 66.6 9.5 64 18-82 281-348 (523)
246 3omz_A Human vdelta1 gamma del 98.3 1.6E-06 5.5E-11 61.9 7.8 78 16-94 77-176 (259)
247 2or8_A Hepatitis A virus cellu 98.3 3E-07 1E-11 58.2 3.4 51 6-56 59-113 (116)
248 2x1w_L Vascular endothelial gr 98.3 7.2E-07 2.5E-11 62.0 5.6 36 17-52 170-205 (213)
249 2wbj_D OB TCR; transmembrane, 98.3 1.5E-06 5.1E-11 62.9 7.5 77 6-82 87-179 (279)
250 3mjg_X Beta-type platelet-deri 98.3 4.3E-07 1.5E-11 65.3 4.5 63 17-79 50-121 (289)
251 1z7z_I Intercellular adhesion 98.3 2E-06 7E-11 65.6 8.5 67 16-82 140-217 (450)
252 2ifg_A High affinity nerve gro 98.3 1.2E-06 4.3E-11 65.2 7.0 37 16-52 307-343 (347)
253 1ry7_B FGFR-3, fibroblast grow 98.3 7E-07 2.4E-11 65.4 5.3 40 18-57 291-330 (334)
254 3so5_A LIG-3, leucine-rich rep 98.3 4.7E-07 1.6E-11 56.0 3.7 34 17-50 75-109 (112)
255 1jhl_L IGG1-kappa D11.15 FV (l 98.3 1.1E-06 3.8E-11 55.2 5.5 36 6-41 59-94 (108)
256 1neu_A Myelin P0 protein; stru 98.3 7.8E-07 2.7E-11 56.7 4.7 51 6-56 67-121 (124)
257 3r4d_A CEA-related cell adhesi 98.3 4.4E-07 1.5E-11 62.0 3.7 48 2-51 149-197 (208)
258 4i0k_A CD276 antigen; immunogl 98.3 7.2E-07 2.5E-11 61.7 4.7 69 17-87 71-144 (222)
259 4dep_C Interleukin-1 receptor 98.3 1.1E-06 3.8E-11 64.8 6.1 62 18-79 177-252 (349)
260 1cs6_A Axonin-1; neural cell a 98.3 1.1E-06 3.7E-11 65.5 6.0 73 16-91 255-330 (382)
261 3rrq_A Protein PD-1, programme 98.3 1.4E-06 4.7E-11 57.0 5.7 39 6-44 61-101 (129)
262 2o26_X MAST/stem cell growth f 98.3 1.6E-06 5.6E-11 62.3 6.6 37 16-52 250-286 (290)
263 2q87_A CMRF35-H antigen; all-b 98.3 1.3E-06 4.3E-11 55.1 5.3 49 6-54 54-108 (110)
264 2v5t_A NCAM2, N-CAM 2, neural 98.3 9.6E-07 3.3E-11 59.2 5.0 79 6-88 48-132 (189)
265 3mj6_A Junctional adhesion mol 98.3 7.5E-07 2.6E-11 63.3 4.5 44 16-59 199-242 (268)
266 3k0w_A Mucosa-associated lymph 98.3 1.2E-06 4.2E-11 61.0 5.5 72 16-88 63-152 (218)
267 3qs9_E FL cytokine receptor; i 98.3 2.5E-06 8.5E-11 67.8 7.8 65 17-88 377-441 (527)
268 3qhz_H Human monoclonal antibo 98.3 3.5E-06 1.2E-10 59.2 7.8 76 7-82 70-161 (232)
269 1iga_A IGA1; immunoglobulin; N 98.3 7.4E-06 2.5E-10 63.4 10.2 83 6-88 66-163 (475)
270 1cs6_A Axonin-1; neural cell a 98.3 1E-06 3.4E-11 65.7 5.1 47 2-52 334-380 (382)
271 3laf_A Deleted in colorectal c 98.2 1.9E-06 6.4E-11 64.4 6.5 47 3-52 353-399 (403)
272 2xqy_G A13-D6.3 monoclonal ant 98.2 4.2E-06 1.4E-10 60.6 8.1 75 6-80 71-156 (261)
273 3qs9_E FL cytokine receptor; i 98.2 1.6E-06 5.4E-11 69.0 6.3 67 17-83 102-169 (527)
274 4dep_C Interleukin-1 receptor 98.2 3.2E-06 1.1E-10 62.3 7.6 60 18-77 79-144 (349)
275 3b5h_A Cervical EMMPRIN, HAB18 98.2 4E-06 1.4E-10 56.3 7.5 71 17-91 50-120 (184)
276 3ry4_A Low affinity immunoglob 98.2 1.8E-06 6.1E-11 57.4 5.6 70 17-88 50-120 (170)
277 2cr6_A KIAA1556 protein, obscu 98.2 5.3E-07 1.8E-11 57.4 2.8 47 2-52 53-100 (115)
278 3liz_H 4C3 monoclonal antibody 98.2 3.6E-06 1.2E-10 60.2 7.5 77 6-82 65-153 (253)
279 2vr9_A Roundabout 1, ROBO; imm 98.2 1.7E-06 5.9E-11 59.5 5.6 42 5-49 160-201 (217)
280 3dmk_A DOWN syndrome cell adhe 98.2 5.1E-06 1.7E-10 68.0 9.2 79 3-82 470-555 (816)
281 1dn0_B IGM-kappa cold agglutin 98.2 4.9E-06 1.7E-10 58.8 8.0 77 6-82 64-155 (232)
282 3rjd_A High affinity immunoglo 98.2 2.6E-06 9E-11 59.9 6.6 70 17-88 47-117 (262)
283 3n9g_H FAB fragment of MAB CR4 98.2 5.1E-06 1.7E-10 58.5 8.0 83 6-88 65-164 (230)
284 4ei6_B Vbeta16 XV19 type II na 98.2 3.3E-06 1.1E-10 59.4 7.0 76 7-82 64-153 (245)
285 1qz1_A Neural cell adhesion mo 98.2 1.7E-06 5.6E-11 62.0 5.5 43 8-52 246-288 (291)
286 4fqp_A Poliovirus receptor; im 98.2 3.3E-06 1.1E-10 61.5 7.1 64 17-80 78-144 (313)
287 1igt_B IGG2A intact antibody - 98.2 5.5E-06 1.9E-10 63.3 8.6 75 6-80 65-150 (444)
288 3ojm_B Fibroblast growth facto 98.2 1.6E-06 5.5E-11 59.8 5.1 40 18-57 185-226 (231)
289 3udw_C Poliovirus receptor; PV 98.2 1.5E-06 5.1E-11 54.5 4.5 47 6-52 62-114 (118)
290 2vr9_A Roundabout 1, ROBO; imm 98.2 5.6E-07 1.9E-11 62.1 2.7 68 20-88 71-143 (217)
291 3bn9_D E2 FAB heavy chain; ant 98.2 2.9E-06 1E-10 61.5 6.7 75 6-80 65-160 (257)
292 2iep_A Muscle-specific kinase 98.2 1.3E-06 4.5E-11 58.8 4.5 46 3-51 141-187 (192)
293 1hxm_B Gamma-delta T-cell rece 98.2 6.5E-06 2.2E-10 58.3 8.4 78 5-82 65-161 (242)
294 3zyi_A Leucine-rich repeat-con 98.2 1.4E-06 4.8E-11 67.4 5.1 43 7-52 399-441 (452)
295 3mjg_X Beta-type platelet-deri 98.2 2.6E-06 8.9E-11 61.1 6.2 37 16-52 240-276 (289)
296 1n26_A IL-6 receptor alpha cha 98.2 3.2E-06 1.1E-10 62.7 6.8 72 18-93 60-134 (325)
297 3grw_A Fibroblast growth facto 98.2 2.5E-06 8.6E-11 59.5 5.5 37 16-52 180-216 (241)
298 4fom_A Poliovirus receptor-rel 98.2 1.2E-06 4.1E-11 63.6 3.9 36 17-52 263-298 (308)
299 3vh8_G Killer cell immunoglobu 98.2 1.3E-05 4.4E-10 58.5 9.5 73 17-92 73-154 (316)
300 1jbj_A CD3 epsilon and gamma e 98.2 2.8E-06 9.5E-11 58.1 5.6 35 17-51 43-78 (186)
301 3u83_A Poliovirus receptor-rel 98.2 5.5E-06 1.9E-10 60.4 7.4 82 5-87 78-169 (331)
302 3q5y_A TCR N15 beta; IG, T cel 98.2 7.8E-06 2.7E-10 57.4 7.9 76 7-82 63-151 (240)
303 2vol_A Murine IGG FC; FC, zinc 98.1 1.3E-06 4.4E-11 60.7 3.4 70 18-87 68-144 (207)
304 1ypz_E T cell receptor delta, 98.1 3.3E-06 1.1E-10 58.9 5.4 37 5-41 55-94 (207)
305 2or7_A T-cell immunoglobulin a 98.1 2.1E-06 7.1E-11 54.5 3.9 51 6-56 60-112 (115)
306 2oyp_A Hepatitis A virus cellu 98.1 1.4E-06 4.9E-11 54.1 3.1 45 6-50 58-104 (109)
307 2rgs_A I, IG gamma-2B heavy ch 98.1 1.3E-06 4.4E-11 61.2 3.2 70 18-87 76-152 (218)
308 3bfo_A Mucosa-associated lymph 98.1 2.3E-06 7.7E-11 52.0 3.9 29 17-45 49-77 (91)
309 3tv3_H PGT128 heavy chain, IG 98.1 8E-06 2.7E-10 57.9 7.3 77 6-82 72-169 (239)
310 3qr2_A Basigin; CD147, EMMPRIN 98.1 1.7E-06 5.8E-11 56.4 3.4 30 16-45 88-117 (137)
311 2v9r_A Roundabout homolog 1; p 98.1 2.8E-06 9.5E-11 58.0 4.7 68 20-88 74-146 (212)
312 2q20_A VK1 O18/O8 germline lig 98.1 3.2E-06 1.1E-10 53.3 4.6 35 6-40 61-95 (109)
313 3iu4_H CHP3 FAB heavy chain; a 98.1 1E-05 3.5E-10 58.6 7.8 83 6-88 64-163 (263)
314 3u2s_H PG9 heavy chain; greek 98.1 9.7E-06 3.3E-10 58.2 7.7 35 6-40 64-100 (248)
315 1oga_E TRBC1, T-cell receptor 98.1 7.4E-06 2.5E-10 58.4 7.0 76 6-82 63-152 (252)
316 2v5m_A Dscam; neurobiology SPL 98.1 5.5E-06 1.9E-10 61.7 6.5 66 17-82 58-132 (388)
317 1wio_A CD4, T-cell surface gly 98.1 3.6E-06 1.2E-10 62.6 5.5 75 7-88 53-130 (363)
318 1h5b_A Murine T cell receptor 98.1 3.4E-06 1.1E-10 53.4 4.5 37 6-42 56-95 (113)
319 1i8k_A Epidermal growth factor 98.1 3.8E-06 1.3E-10 52.8 4.6 35 6-40 59-93 (107)
320 3s97_C Contactin-1; carbonic a 98.1 5.5E-06 1.9E-10 55.9 5.7 67 17-83 65-143 (201)
321 3uzq_A Anti-dengue MAB 4E11; d 98.1 4E-06 1.4E-10 59.6 5.1 40 6-45 195-234 (253)
322 3kg5_A B-cell antigen receptor 98.1 1.8E-05 6.2E-10 52.4 8.0 55 5-59 67-126 (134)
323 3sob_H Antibody heavy chain, l 98.1 1.4E-05 4.9E-10 57.1 8.1 83 6-88 88-190 (256)
324 2v9r_A Roundabout homolog 1; p 98.1 3.5E-06 1.2E-10 57.4 4.6 34 18-51 165-199 (212)
325 1j05_L T84.66 antibody, anti-C 98.1 4E-06 1.4E-10 52.9 4.6 35 6-40 63-97 (111)
326 1ncn_A T lymphocyte activation 98.1 4.7E-06 1.6E-10 52.3 4.8 44 7-52 60-103 (110)
327 1igy_B IGG1 intact antibody MA 98.1 1.2E-06 4.1E-11 66.9 2.4 77 6-82 64-148 (434)
328 3p3y_A Neurofascin; IG domains 98.1 2.7E-06 9.1E-11 63.5 4.2 72 17-88 72-151 (404)
329 3s97_C Contactin-1; carbonic a 98.1 4.5E-06 1.5E-10 56.3 5.0 36 17-52 164-199 (201)
330 1itb_B Type 1 interleukin-1 re 98.1 3.8E-06 1.3E-10 61.0 4.9 36 17-52 276-312 (315)
331 1iga_A IGA1; immunoglobulin; N 98.1 1.2E-05 4.2E-10 62.2 8.0 71 17-87 308-385 (475)
332 1xt5_A Variable region-contain 98.1 2.9E-06 1E-10 54.8 3.9 45 7-52 82-131 (135)
333 4frw_A Poliovirus receptor-rel 98.1 1.6E-05 5.5E-10 53.7 7.8 67 17-83 78-148 (218)
334 2id5_A Lingo-1, leucine rich r 98.1 3.7E-06 1.3E-10 65.1 5.0 44 6-52 432-475 (477)
335 2e27_L Anti-ciguatoxin antibod 98.1 4.5E-06 1.6E-10 53.8 4.6 35 6-40 61-95 (119)
336 2c5d_C AXL oncogene, tyrosine- 98.1 5.4E-06 1.9E-10 56.2 5.2 37 16-54 156-193 (195)
337 1qfw_M FV, antibody (anti beta 98.1 3.6E-06 1.2E-10 53.0 4.0 35 6-40 59-93 (108)
338 1ugn_A LIR1, leukocyte immunog 98.1 7.1E-06 2.4E-10 56.1 5.8 27 16-42 155-181 (198)
339 1mqk_L Antibody 7E2 FV fragmen 98.1 4.7E-06 1.6E-10 53.7 4.6 35 6-40 59-93 (120)
340 2v44_A NCAM2, neural cell adhe 98.1 5E-06 1.7E-10 56.0 4.8 40 5-47 141-180 (189)
341 3oq3_B IFN-alpha/beta binding 98.0 1.1E-05 3.7E-10 59.4 6.9 73 17-91 88-165 (329)
342 1ypz_F T-cell receptor gamma c 98.0 7.4E-06 2.5E-10 57.8 5.6 75 5-82 64-159 (230)
343 2yd1_A Tyrosine-protein phosph 98.0 5.2E-06 1.8E-10 57.2 4.7 42 6-51 155-197 (212)
344 3mlr_H Human monoclonal anti-H 98.0 7.6E-06 2.6E-10 57.6 5.6 82 7-88 66-165 (226)
345 2wqr_A IG epsilon chain C regi 98.0 4.9E-06 1.7E-10 61.1 4.7 66 17-82 177-248 (323)
346 2ny1_B T-cell surface glycopro 98.0 6.7E-06 2.3E-10 55.4 5.1 36 17-52 142-177 (184)
347 4frw_A Poliovirus receptor-rel 98.0 4.8E-06 1.6E-10 56.4 4.2 35 17-51 174-208 (218)
348 3f8u_B Tapasin; endoplasmic re 98.0 2.2E-05 7.5E-10 61.1 8.4 76 16-92 252-334 (401)
349 3o4o_C Interleukin-1 receptor 98.0 3.7E-06 1.2E-10 61.7 3.9 60 18-77 81-144 (339)
350 1f97_A Junction adhesion molec 98.0 2.1E-06 7.2E-11 58.4 2.4 38 15-52 166-205 (212)
351 1z7z_I Intercellular adhesion 98.0 4.6E-05 1.6E-09 58.0 10.2 69 16-86 48-119 (450)
352 2kbg_A N-CAM 2, neural cell ad 98.0 2.4E-05 8.1E-10 50.6 7.3 64 52-122 7-73 (114)
353 2ifg_A High affinity nerve gro 98.0 3.1E-06 1.1E-10 63.1 3.5 70 15-88 209-280 (347)
354 1igt_B IGG2A intact antibody - 98.0 3.2E-06 1.1E-10 64.6 3.5 71 17-87 304-381 (444)
355 4f80_A Butyrophilin subfamily 98.0 5.3E-06 1.8E-10 57.8 4.3 39 14-52 173-211 (226)
356 3to4_D NKT vbeta2 (mouse varia 98.0 5.8E-06 2E-10 58.9 4.5 72 8-80 65-151 (253)
357 1eeq_A Kappa-4 immunoglobulin 98.0 7.6E-06 2.6E-10 51.9 4.6 35 6-40 65-99 (114)
358 2fbo_J V1V2;, variable region- 98.0 6.3E-06 2.1E-10 57.6 4.5 34 18-51 213-249 (250)
359 2v9t_A Roundabout homolog 1; s 98.0 3.1E-06 1E-10 53.6 2.7 23 24-46 78-100 (117)
360 1kgc_D T-cell receptor alpha c 98.0 1.8E-05 6E-10 55.7 6.8 74 6-83 56-143 (206)
361 3q0h_A T cell immunoreceptor w 98.0 1.1E-05 3.9E-10 51.7 5.3 44 6-52 62-106 (117)
362 4i0k_A CD276 antigen; immunogl 98.0 1E-05 3.5E-10 55.8 5.5 38 15-52 167-204 (222)
363 3gkz_A Anti-methamphetamine si 98.0 7.1E-06 2.4E-10 58.3 4.7 38 6-43 200-237 (257)
364 2nms_A CMRF35-like-molecule 1; 98.0 3.4E-05 1.2E-09 50.0 7.5 51 6-56 61-113 (124)
365 1pew_A JTO2, A lambda-6 type i 98.0 8.4E-06 2.9E-10 51.3 4.4 35 6-40 58-94 (109)
366 2qhl_A Novel immune-type recep 98.0 9.9E-06 3.4E-10 51.2 4.8 35 6-40 64-98 (111)
367 2ghw_B Anti-SARS SCFV antibody 98.0 1.5E-05 5.2E-10 56.1 6.2 37 6-42 193-229 (247)
368 2h32_A Immunoglobulin IOTA cha 98.0 2.3E-06 7.9E-11 55.8 1.7 50 6-55 65-116 (126)
369 2p1y_A Bispecific alpha/beta T 98.0 1.2E-05 3.9E-10 56.3 5.5 36 6-41 185-222 (238)
370 1i3g_L Antibody FV fragment; a 98.0 8.4E-06 2.9E-10 51.5 4.3 35 6-40 62-96 (111)
371 3qib_D 2B4 beta chain; IG doma 98.0 1.3E-05 4.3E-10 57.5 5.6 73 8-80 90-176 (270)
372 1jbj_A CD3 epsilon and gamma e 97.9 2.7E-06 9.1E-11 58.2 1.8 29 16-44 151-179 (186)
373 3umt_A SCFV heavy chain and li 97.9 1.2E-05 4.3E-10 57.1 5.3 39 6-44 196-234 (256)
374 4fmk_A Poliovirus receptor-rel 97.9 1.6E-05 5.3E-10 54.1 5.4 31 18-48 181-211 (225)
375 1dlf_L Anti-dansyl immunoglobu 97.9 1.2E-05 4.2E-10 50.8 4.6 35 6-40 64-98 (113)
376 2ens_A Advanced glycosylation 97.9 5.4E-06 1.8E-10 50.8 2.8 31 16-46 55-85 (96)
377 1n26_A IL-6 receptor alpha cha 97.9 0.00019 6.5E-09 53.0 11.7 100 17-121 154-264 (325)
378 2bnu_A TCR alpha chain, T-cell 97.9 2.2E-05 7.6E-10 54.9 6.0 73 6-82 58-143 (203)
379 4ffy_L DENV1-E111 single chain 97.9 1.4E-05 4.8E-10 51.7 4.6 37 6-42 63-99 (126)
380 3v2a_R Vascular endothelial gr 97.9 1.6E-06 5.5E-11 70.1 0.0 52 3-56 707-760 (772)
381 3bp6_B Programmed cell death 1 97.9 1.6E-05 5.5E-10 54.2 5.0 39 14-52 153-191 (202)
382 1za6_B IGG heavy chain; immuno 97.9 2.4E-05 8.2E-10 58.0 6.3 28 18-46 182-209 (344)
383 1f3r_B FV antibody fragment; I 97.9 1.2E-05 4.2E-10 57.3 4.6 36 6-41 197-232 (257)
384 4gjt_B Poliovirus receptor-rel 97.9 1.8E-05 6E-10 51.0 4.9 46 7-52 66-115 (123)
385 3sgj_C Human FCG3A receptor; r 97.9 8.1E-06 2.8E-10 56.7 3.5 41 17-57 136-179 (204)
386 1f2q_A High affinity immunoglo 97.9 1.6E-05 5.3E-10 53.4 4.7 38 17-54 133-173 (176)
387 1epf_A NCAM, protein (neural c 97.9 1.4E-05 4.7E-10 53.7 4.5 39 5-46 145-183 (191)
388 1nqb_A Single-chain antibody f 97.9 2.2E-05 7.4E-10 56.2 5.7 37 6-42 184-220 (256)
389 2otu_A FV light chain variable 97.9 2.2E-05 7.4E-10 49.9 5.1 36 6-41 64-99 (115)
390 1oaq_L Light chain; antibody, 97.9 2.1E-05 7.3E-10 50.3 5.0 36 6-41 61-96 (120)
391 2ywz_A NEW antigen receptor va 97.9 2.2E-05 7.4E-10 49.7 4.9 36 5-40 51-88 (111)
392 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.9 1.3E-05 4.5E-10 57.1 4.3 41 6-46 197-238 (256)
393 1tvd_A T cell receptor, ES204 97.9 2.1E-05 7.2E-10 49.9 4.8 35 6-40 62-98 (116)
394 2edo_A CD48 antigen; beta-sand 97.8 1E-05 3.5E-10 52.2 3.3 43 7-51 64-107 (121)
395 3auv_A SC-DSFV derived from th 97.8 2.5E-05 8.5E-10 56.3 5.5 36 6-41 199-236 (276)
396 1zvo_C Myeloma immunoglobulin 97.8 0.00011 3.6E-09 57.9 9.6 77 6-82 66-164 (512)
397 3p2t_A Leukocyte immunoglobuli 97.8 1.5E-05 5E-10 54.4 4.1 27 16-42 153-179 (196)
398 2ptt_A CD48 antigen; CD244, CD 97.8 1.1E-05 3.7E-10 50.6 3.2 43 7-52 64-106 (110)
399 2coq_A NEW antigen receptor va 97.8 2.6E-05 9E-10 49.0 4.9 35 5-39 51-87 (108)
400 2w59_A IGY FCU3-4; immunoglobu 97.8 1.9E-05 6.4E-10 55.8 4.6 65 18-82 77-147 (231)
401 3ry4_A Low affinity immunoglob 97.8 1.4E-05 4.8E-10 52.9 3.8 30 16-45 132-161 (170)
402 1i1r_A GP130, interleukin-6 re 97.8 0.00018 6.2E-09 52.3 10.0 102 18-121 158-268 (303)
403 2frg_P TREM-like transcript-1; 97.8 9.7E-05 3.3E-09 46.7 7.5 49 6-54 55-105 (106)
404 2ak4_D SB27 T cell receptor al 97.8 3.7E-05 1.3E-09 54.2 6.1 74 6-83 63-148 (211)
405 3v2a_R Vascular endothelial gr 97.8 3.5E-05 1.2E-09 62.2 6.6 70 17-87 289-363 (772)
406 2hp4_A T-cell surface glycopro 97.8 3.1E-05 1.1E-09 49.3 5.0 35 6-40 65-99 (114)
407 2eys_A NKT15; natural killer T 97.8 5.8E-05 2E-09 53.3 6.9 75 6-83 61-147 (210)
408 1nko_A Sialic acid binding IG- 97.8 1.7E-05 5.7E-10 51.4 3.8 35 6-40 74-110 (132)
409 2d9c_A Signal-regulatory prote 97.8 3E-05 1E-09 50.5 5.1 26 17-42 78-103 (136)
410 3juy_B 3B3 single chain varian 97.8 2.1E-05 7.2E-10 55.9 4.5 38 5-42 207-244 (256)
411 3fku_X Neutralizing antibody F 97.8 2.8E-05 9.7E-10 56.4 5.3 36 6-41 199-234 (280)
412 3bdb_A Novel immune-type recep 97.8 4.2E-05 1.4E-09 50.4 5.6 36 6-41 64-99 (137)
413 2nw2_A ELS4 TCR alpha chain; T 97.8 2.6E-05 8.7E-10 54.7 4.8 74 6-83 56-141 (200)
414 1i1c_A IGG2A, IG gamma-2A chai 97.8 2.4E-05 8.2E-10 55.9 4.7 70 18-87 82-158 (239)
415 2wng_A Tyrosine-protein phosph 97.8 3.1E-05 1E-09 56.7 5.3 71 18-88 180-256 (327)
416 2wqr_A IG epsilon chain C regi 97.8 2.2E-05 7.4E-10 57.6 4.3 66 18-83 72-143 (323)
417 1sy6_A T-cell surface glycopro 97.8 3.7E-06 1.3E-10 58.6 0.2 35 17-51 165-201 (204)
418 2znx_A SCFV; fluorotryptohpan, 97.8 3.8E-05 1.3E-09 54.3 5.4 40 6-45 186-229 (242)
419 3u1s_H FAB PGT145 heavy chain; 97.8 7.1E-05 2.4E-09 54.0 7.0 33 6-38 88-122 (267)
420 3r0n_A Poliovirus receptor-rel 97.8 2.6E-05 9E-10 50.0 4.2 35 17-51 92-127 (128)
421 1bqu_A Protein (GP130); cytoki 97.8 0.0003 1E-08 48.4 9.8 102 18-121 62-172 (215)
422 1u9k_A Triggering receptor exp 97.8 5.8E-05 2E-09 47.8 5.7 37 6-42 62-100 (114)
423 1u3h_A T-cell receptor alpha-c 96.9 3.9E-06 1.3E-10 53.0 0.0 37 5-41 56-94 (110)
424 1lp9_E T-cell receptor alpha c 97.7 1.6E-05 5.5E-10 55.4 3.1 75 6-84 59-146 (194)
425 1hxm_A Gamma-delta T-cell rece 97.7 0.00012 4.2E-09 52.0 7.9 35 6-40 61-97 (229)
426 2yc1_B Single chain antibody f 97.7 3E-05 1E-09 52.0 4.3 36 6-41 74-109 (146)
427 1fo0_B Protein (BM3.3 T cell r 97.7 1.9E-05 6.6E-10 50.0 3.1 33 7-40 64-96 (112)
428 3eow_R Poliovirus receptor; im 97.7 2.7E-05 9.3E-10 53.8 4.1 41 17-57 175-215 (221)
429 3bp6_A Programmed cell death p 97.7 0.00012 4.3E-09 46.5 7.0 37 6-42 59-97 (117)
430 2gki_A Nuclease; anti-DNA anti 97.7 4.1E-05 1.4E-09 55.8 5.2 36 6-41 223-258 (291)
431 2q7n_A Leukemia inhibitory fac 97.7 0.0001 3.4E-09 58.6 7.8 78 15-93 248-330 (488)
432 3t0v_A Immunoglobulin variable 97.7 4.7E-05 1.6E-09 49.4 5.0 36 6-41 60-95 (123)
433 1ow0_A IG alpha-1 chain C regi 97.7 1.7E-05 5.9E-10 55.2 3.0 71 17-87 65-142 (214)
434 1nbq_A JAM, junctional adhesio 97.7 4.1E-06 1.4E-10 56.9 -0.2 31 16-46 169-199 (209)
435 1svz_A Immunoglobulin;, single 97.7 3.6E-05 1.2E-09 54.1 4.7 35 6-40 192-228 (247)
436 1rhf_A Tyrosine-protein kinase 97.7 3.7E-05 1.3E-09 51.3 4.5 34 16-51 146-180 (182)
437 2oz4_A Intercellular adhesion 97.7 1.3E-05 4.6E-10 57.0 2.4 69 15-83 139-215 (265)
438 1sq2_N Novel antigen receptor; 97.7 4.5E-05 1.5E-09 48.4 4.6 36 5-40 51-88 (113)
439 3u6r_L Antibody 1:7 (light cha 97.7 4.3E-05 1.5E-09 51.1 4.7 36 6-41 58-93 (143)
440 1dlf_H Anti-dansyl immunoglobu 97.7 0.00011 3.8E-09 47.2 6.5 35 6-40 67-103 (124)
441 3ux9_B SCFV antibody; five hel 97.7 4.5E-05 1.6E-09 53.9 4.9 36 6-41 199-236 (256)
442 1fo0_A Protein (BM3.3 T cell r 97.7 3.9E-05 1.3E-09 48.7 4.1 35 6-40 60-96 (116)
443 2atp_B T-cell surface glycopro 97.7 3.2E-05 1.1E-09 49.0 3.7 34 6-39 65-100 (115)
444 1fnl_A Low affinity immunoglob 97.7 3E-05 1E-09 52.0 3.7 29 17-45 136-164 (175)
445 3rgv_A YAE62 TCR A chain; TCR, 97.7 0.00011 3.6E-09 52.0 6.7 75 6-84 58-141 (200)
446 3moq_A NEW antigen receptor va 97.7 4.1E-05 1.4E-09 50.1 4.2 40 4-43 50-91 (126)
447 1oga_D T-cell receptor alpha c 97.7 0.00012 4.2E-09 51.8 7.0 75 6-83 58-141 (215)
448 1qok_A MFE-23 recombinant anti 97.7 4.6E-05 1.6E-09 55.2 4.8 37 6-42 219-255 (282)
449 1p4b_L Antibody variable light 97.7 5.8E-05 2E-09 49.8 4.9 36 6-41 66-101 (135)
450 3mbe_C I-AG7; T cell receptor, 97.7 0.00012 4.3E-09 52.7 6.8 75 6-84 56-142 (229)
451 3bj9_1 Immunoglobulin IOTA cha 97.6 2.5E-05 8.7E-10 49.4 2.8 36 6-41 63-100 (116)
452 1mfa_H IGG1-lambda Se155-4 FAB 97.6 7.3E-05 2.5E-09 47.7 4.9 35 6-40 65-101 (120)
453 3bia_X T-cell immunoglobulin a 97.6 7E-05 2.4E-09 47.4 4.8 49 6-54 59-111 (116)
454 2vkw_A Neural cell adhesion mo 97.6 0.00027 9.2E-09 48.5 8.2 80 19-102 69-156 (209)
455 1sjv_A R9; camelids antibody, 97.6 4.8E-05 1.6E-09 48.1 4.0 34 6-39 64-99 (114)
456 2yc1_A Single chain antibody f 97.6 7.6E-05 2.6E-09 47.3 4.9 35 6-40 65-101 (117)
457 3b9v_A Heavy chain variable do 97.6 6.8E-05 2.3E-09 47.8 4.7 35 6-40 65-101 (120)
458 3sbw_C Programmed cell death 1 97.6 6.2E-05 2.1E-09 51.7 4.8 33 21-53 178-210 (222)
459 1v5j_A KIAA1355 protein, RSGI 97.6 0.00016 5.5E-09 46.2 6.4 52 67-122 19-72 (108)
460 1hng_A CD2; T lymphocyte adhes 97.6 2.3E-05 7.9E-10 53.2 2.5 32 20-51 142-173 (176)
461 1kxv_C Camelid VHH domain CAB1 97.6 8.1E-05 2.8E-09 47.6 4.9 35 6-40 64-100 (121)
462 1hzh_H IGG, immunoglobulin hea 97.6 0.0001 3.4E-09 56.6 6.2 64 18-82 194-278 (457)
463 3bik_B Programmed cell death p 97.6 0.00026 8.8E-09 46.4 7.4 37 6-42 69-107 (134)
464 2d3v_A Leukocyte immunoglobuli 97.6 3.6E-05 1.2E-09 52.5 3.3 27 17-43 155-181 (196)
465 1zvo_C Myeloma immunoglobulin 97.6 0.00033 1.1E-08 55.0 9.2 70 18-87 361-436 (512)
466 1l6x_A Immunoglobulin gamma-1 97.6 4.6E-05 1.6E-09 52.5 3.8 69 19-87 69-144 (207)
467 3c6l_A TCR 2W20 alpha chain; T 96.8 8.8E-06 3E-10 56.8 0.0 75 6-84 58-140 (185)
468 1n4x_H Immunoglobulin heavy ch 97.6 8.7E-05 3E-09 47.3 4.7 35 6-40 65-101 (120)
469 1a2y_B IGG1-kappa D1.3 FV (hea 97.6 6.8E-05 2.3E-09 47.6 4.0 34 7-40 65-100 (116)
470 1j05_H T84.66 antibody, anti-C 97.6 8.9E-05 3E-09 47.4 4.6 34 7-40 66-101 (121)
471 3k0w_A Mucosa-associated lymph 97.6 4.3E-05 1.5E-09 52.9 3.3 36 16-51 163-199 (218)
472 3esu_F Antibody 14B7* light ch 97.6 7.3E-05 2.5E-09 52.6 4.4 34 6-39 196-231 (250)
473 2oz4_A Intercellular adhesion 97.6 0.00031 1E-08 49.8 7.8 60 19-78 57-123 (265)
474 1hkf_A NKP44, NK cell activati 97.5 0.0003 1E-08 45.4 6.7 37 5-41 69-107 (122)
475 3mj8_L Stimulatory hamster ant 97.5 3.7E-05 1.2E-09 52.7 2.4 33 18-50 177-209 (213)
476 2wzp_D Camelid VHH5; baseplate 97.5 9.3E-05 3.2E-09 47.4 4.2 35 6-40 65-101 (123)
477 1igy_B IGG1 intact antibody MA 97.5 0.00028 9.6E-09 53.7 7.5 63 18-81 180-258 (434)
478 2q86_A Valpha14 TCR; INKT cell 97.5 9.5E-05 3.3E-09 52.9 4.5 70 6-79 59-137 (229)
479 1xiw_D Immunoglobulin heavy ch 97.5 0.00012 4.2E-09 46.8 4.6 35 6-40 65-101 (122)
480 3gsn_A RA14 TCR alpha chain (T 97.5 9.4E-05 3.2E-09 52.2 4.4 74 6-83 58-140 (199)
481 1kxt_B Immunoglobulin VHH frag 97.5 0.00013 4.3E-09 47.3 4.7 35 6-40 64-100 (127)
482 3fl7_A Ephrin receptor; ATP-bi 97.5 2.6E-05 8.7E-10 62.7 1.5 98 24-123 301-410 (536)
483 3tjh_C 42F3 alpha; IG MHC, ant 97.5 0.00022 7.4E-09 51.4 6.3 74 7-84 69-154 (226)
484 2p45_B Antibody CAB-RN05; seMe 97.5 0.0001 3.4E-09 47.3 4.1 34 7-40 68-103 (123)
485 1yc7_A Anti-VSG immunoglobulin 97.5 0.00016 5.4E-09 46.8 5.1 35 6-40 64-100 (124)
486 1xau_A B- and T-lymphocyte att 97.5 0.00015 5.1E-09 47.2 4.7 30 17-46 78-107 (122)
487 2oi9_C V beta, T cell receptor 97.5 0.00015 5.1E-09 46.7 4.8 35 6-40 61-96 (121)
488 1oll_A NK receptor; immune sys 97.5 9.7E-05 3.3E-09 50.1 4.1 27 15-41 146-172 (188)
489 2x1q_A Gelsolin nanobody; cont 97.5 0.00014 5E-09 47.0 4.7 35 6-40 65-101 (127)
490 1p6f_A NKP46, natural cytotoxi 97.5 9.7E-05 3.3E-09 52.9 4.1 46 15-60 149-199 (242)
491 2pnd_A V-SET and immunoglobuli 97.5 0.00014 4.8E-09 46.3 4.5 34 6-39 65-99 (119)
492 4ei6_A Valpha1 XV19 type II na 97.5 0.00013 4.5E-09 51.8 4.7 75 6-84 59-146 (208)
493 1i3u_A Antibody VHH LAMA domai 97.5 0.00015 5E-09 46.8 4.5 34 7-40 71-106 (127)
494 2vsd_A CHIR AB1; immune system 97.5 9.1E-05 3.1E-09 46.4 3.4 27 15-41 53-79 (105)
495 1zxq_A ICAM-2, intercellular a 97.4 0.0033 1.1E-07 44.1 11.7 72 17-90 51-125 (192)
496 3cx5_J Heavy chain (VH) of FV- 97.4 9.6E-05 3.3E-09 47.8 3.4 35 6-40 65-101 (127)
497 2jjs_C Leukocyte surface antig 97.4 9E-05 3.1E-09 49.0 3.2 36 18-53 78-114 (127)
498 1wis_A KIAA1514 protein; FNIII 97.4 0.0005 1.7E-08 44.0 6.8 70 52-122 16-88 (124)
499 1zvh_A Immunoglobulin heavy ch 97.4 0.00017 5.7E-09 47.3 4.5 34 7-40 66-101 (134)
500 1mqk_H Antibody 7E2 FV fragmen 97.4 0.00017 5.9E-09 46.6 4.5 35 6-40 65-101 (127)
No 1
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.47 E-value=6.4e-13 Score=92.94 Aligned_cols=97 Identities=18% Similarity=0.264 Sum_probs=76.5
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeC---CCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS---SYT 81 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~---s~~ 81 (123)
.|+.+...+..+.|.|.+++..|+|.|+|.|.|.+|.....+.|. ..|.+|..... .....++.|.|..+ ++.
T Consensus 65 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~ 142 (215)
T 3mtr_A 65 SNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGV 142 (215)
T ss_dssp CSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSS
T ss_pred ccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEE--EEecceEEEEEecCCccCCC
Confidence 678887767789999999999999999999999999998877665 46777655432 23467899999853 567
Q ss_pred CCcceEEEeEEcCCCCCCceeeeecc
Q psy17207 82 PLEEFKIKYRKIPGNEPSPMSNQLTG 107 (123)
Q Consensus 82 pi~~y~v~yr~~~~~~~~w~~~~~~~ 107 (123)
|+..|.|+|+.... ..|.......
T Consensus 143 pi~~y~v~~~~~~~--~~w~~~~~~~ 166 (215)
T 3mtr_A 143 PILKYKAEWRAVGE--EVWHSKWYDA 166 (215)
T ss_dssp CEEEEEEEEEETTC--CCCEEEEEEH
T ss_pred ceEEEEEEEEECCC--Cccccccccc
Confidence 99999999998653 5788765443
No 2
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.40 E-value=1.1e-11 Score=90.10 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=79.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcc-cCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS 78 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~ 78 (123)
+|..+.|+.+...+....|.|.+ +...|+|.|+|.|.|.+|....++.|. ..|.+|..... .....+.+.|.|..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~v~l~w~~p 222 (305)
T 2nzi_A 144 LIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKV-SDVSRDSVNLTWTEP 222 (305)
T ss_dssp BCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEE-ESCCSSCEEEEEECC
T ss_pred ECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCcee-eeccCCEEEEEEcCC
Confidence 45567888888777788999999 999999999999999999998876655 56777654432 223578899999963
Q ss_pred ---CCCCCcceEEEeEEcCCCCCCceeeee
Q psy17207 79 ---SYTPLEEFKIKYRKIPGNEPSPMSNQL 105 (123)
Q Consensus 79 ---s~~pi~~y~v~yr~~~~~~~~w~~~~~ 105 (123)
+..++..|.++|+... ...|.....
T Consensus 223 ~~~g~~~i~~y~v~~~~~~--~~~w~~~~~ 250 (305)
T 2nzi_A 223 ASDGGSKITNYIVEKCATT--AERWLRVGQ 250 (305)
T ss_dssp SCCSBSCEEEEEEEEEETT--SCCEEEEEE
T ss_pred ccCCCCceeEEEEEEecCC--CCccEECcc
Confidence 5678999999999864 367876653
No 3
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.27 E-value=1.2e-10 Score=87.33 Aligned_cols=95 Identities=16% Similarity=0.236 Sum_probs=72.7
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeC---CCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVS---SYT 81 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~---s~~ 81 (123)
.|+.+...+..+.|.|.++...|+|.|+|.|.|..|.....+.|. ..|.+|..... .......+.|.|.++ ++.
T Consensus 147 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~-~~~~~~~~~l~w~~p~~~~g~ 225 (389)
T 2jll_A 147 TNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKI-IELSQTTAKVSFNKPDSHGGV 225 (389)
T ss_dssp TTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEE-EEECSSCEEEEEECCSCCTTS
T ss_pred ceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEE-eeccCCEEEEEEeCCCCCCCc
Confidence 478887777788999999999999999999999999998876665 46666632221 122467899999953 456
Q ss_pred CCcceEEEeEEcCCCCCCceeee
Q psy17207 82 PLEEFKIKYRKIPGNEPSPMSNQ 104 (123)
Q Consensus 82 pi~~y~v~yr~~~~~~~~w~~~~ 104 (123)
|+..|.|+|+.... ..|....
T Consensus 226 pi~~y~v~~~~~~~--~~~~~~~ 246 (389)
T 2jll_A 226 PIHHYQVDVKEVAS--EIWKIVR 246 (389)
T ss_dssp CEEEEEEEEEETTC--SCCEEEE
T ss_pred ceEEEEEEEEECCC--cccEEee
Confidence 89999999998643 6677554
No 4
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.23 E-value=1.6e-11 Score=78.73 Aligned_cols=51 Identities=27% Similarity=0.487 Sum_probs=46.0
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+...+..+.|.|.+++.+|+|.|+|+|+|.+|.+..++.|..
T Consensus 53 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 103 (107)
T 3knb_B 53 QLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEE
Confidence 567889999988888899999999999999999999999999998877764
No 5
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.15 E-value=1.7e-10 Score=73.58 Aligned_cols=58 Identities=22% Similarity=0.365 Sum_probs=47.6
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCcee
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIF 59 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~ 59 (123)
+|..++|+.+......+.|.|.+++.+|+|.|+|.|.|.+|.....+.|. +.|.+|..
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 47 QIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAG 106 (114)
T ss_dssp BCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCSCCCC
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCCCCCC
Confidence 45667899988777788999999999999999999999999988765554 56666543
No 6
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.13 E-value=1.5e-10 Score=73.11 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=41.8
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.|+.+...+..++|.|.+++.+|+|.|+|.|+|.+|.+..++.|..
T Consensus 52 ~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 52 GRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp GTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEE
Confidence 5888888888899999999999999999999999999998877764
No 7
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=2.2e-10 Score=72.33 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=45.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~ 55 (123)
+|..++|+.+...+..+.|.|.+++.+|+|.|+|+|.|......+.+.|..+|.
T Consensus 45 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 45 PVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHVISGPS 98 (100)
T ss_dssp ECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSSCCCEEEEEEEECCSC
T ss_pred ECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCCCeeEEEEEEEeCCCC
Confidence 467789999988888899999999999999999999999556666677766553
No 8
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.06 E-value=1.6e-09 Score=76.34 Aligned_cols=76 Identities=14% Similarity=0.037 Sum_probs=57.4
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeec---CCCCCCCCeEEEEEEeCCCCCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS---HPQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~---~~~~~~~~~~~L~w~~~s~~pi 83 (123)
.|+.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|...+. |.+.. ......+..+.|.|.+.+.|+.
T Consensus 58 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p-~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P 136 (203)
T 4fa8_A 58 GFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKP-LTLSVHSERSQFPDFSVLTVTCTVNAFPHP 136 (203)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-EEEEEEEEECCSSCSCCEEEEEEEEEESCC
T ss_pred ceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCC-ceeeecceeEEEcCCCEEEEEEEcCCCCCC
Confidence 4666666677889999999999999999999999999998887776432 22221 1222357789999999876554
No 9
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.04 E-value=2e-09 Score=74.06 Aligned_cols=85 Identities=21% Similarity=0.267 Sum_probs=63.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc--------------------CCCceeec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--------------------PNPAIFRS 61 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~--------------------P~p~~~~~ 61 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|..|....++.|.+. +.|+.+..
T Consensus 43 ~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 122 (212)
T 2r15_A 43 AIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG 122 (212)
T ss_dssp ECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEB
T ss_pred EccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCccccc
Confidence 4566789988877778889999999999999999999999999988888532 12333322
Q ss_pred CCC---CCCCCeEEEEEEeCCCCCCcceE
Q psy17207 62 HPQ---GRLPNSYNITWMVSSYTPLEEFK 87 (123)
Q Consensus 62 ~~~---~~~~~~~~L~w~~~s~~pi~~y~ 87 (123)
.+. ...+..+.|.|.+.+.++.. +.
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~-v~ 150 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPE-VS 150 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCE-EE
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCce-EE
Confidence 111 12467899999998766553 44
No 10
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.04 E-value=7.6e-10 Score=74.28 Aligned_cols=49 Identities=27% Similarity=0.386 Sum_probs=43.5
Q ss_pred ccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 4 ETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 4 ~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..++|+.+...+..+.|.|.+++..|+|.|+|+|.|.+|.+..++.|.+
T Consensus 89 ~~~~r~~i~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 89 ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp SCSSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCCeEEEEeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 3567888887777889999999999999999999999999999888764
No 11
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.00 E-value=5.2e-09 Score=70.99 Aligned_cols=88 Identities=23% Similarity=0.277 Sum_probs=61.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-EEEEEEeccCCCceeecCC---CCCCCCeEEEEEEe
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMV 77 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~ 77 (123)
++..++|+.+...+....|.|.+++.+|+|.|+|.|.|..|.. ...+.|.....| .+...+ ....+..+.|.|.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~ 120 (189)
T 2v44_A 42 KIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKL-TFREVVSPQEFKQGEDAEVVCRV 120 (189)
T ss_dssp BCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCC-EEESCCCSEEEETTSCEEECCEE
T ss_pred ccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCC-ceeecCCcEEEeCCCCEEEEEEE
Confidence 4566789988887778899999999999999999999999987 445555432222 222111 11246789999999
Q ss_pred CCCCCCcceEEEeEE
Q psy17207 78 SSYTPLEEFKIKYRK 92 (123)
Q Consensus 78 ~s~~pi~~y~v~yr~ 92 (123)
.+.++. .+. ||+.
T Consensus 121 ~g~p~p-~v~-W~~~ 133 (189)
T 2v44_A 121 SSSPAP-AVS-WLYH 133 (189)
T ss_dssp ECSSCC-EEE-EEEE
T ss_pred CcCCCC-cEE-EEEC
Confidence 876654 344 4443
No 12
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.99 E-value=1.3e-09 Score=67.95 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=44.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 48 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 98 (103)
T 3qp3_A 48 ELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98 (103)
T ss_dssp ECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 456678998887777889999999999999999999999999998776654
No 13
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=1.6e-09 Score=67.73 Aligned_cols=54 Identities=24% Similarity=0.404 Sum_probs=44.0
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCc
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~ 57 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.| ......+.|...|.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 47 AIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA--SKSTASLHVEEKASGP 100 (103)
T ss_dssp BCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--CEEEEEEEECCCSSSS
T ss_pred EccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--CCcEEEEEEeCCCCCC
Confidence 46677899998888888999999999999999999999 4555566666666554
No 14
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.98 E-value=1.3e-09 Score=68.25 Aligned_cols=53 Identities=26% Similarity=0.416 Sum_probs=43.1
Q ss_pred cccCC--CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCc
Q psy17207 3 LETTE--RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (123)
Q Consensus 3 l~~d~--R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~ 57 (123)
|..+. ||.+...+....|.|.+++.+|+|.|+|.|.| +...+.+.|.+.|.|+
T Consensus 47 l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~p~ 101 (103)
T 1x44_A 47 IIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG--GQSSAKLSVDLKSGPS 101 (103)
T ss_dssp CCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT--EEEEEEEEEECCCSCC
T ss_pred CCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC--CcEEEEEEEeCCCCCC
Confidence 45556 88988878889999999999999999999999 5666677777766553
No 15
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.98 E-value=1.8e-09 Score=66.51 Aligned_cols=51 Identities=22% Similarity=0.274 Sum_probs=44.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
++..++|+.+...+....|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 46 AITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 356678999887777889999999999999999999999999988877654
No 16
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.98 E-value=2e-09 Score=66.55 Aligned_cols=51 Identities=25% Similarity=0.455 Sum_probs=44.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 42 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 42 QLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEE
Confidence 356678998876666789999999999999999999999999998877764
No 17
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.97 E-value=1.2e-09 Score=69.32 Aligned_cols=51 Identities=37% Similarity=0.402 Sum_probs=44.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+...+..+.|.|.+++..|+|.|+|.|.|..|....++.|..
T Consensus 54 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 54 VLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp CCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEE
T ss_pred ECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEE
Confidence 456678999887777889999999999999999999999999988887764
No 18
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.97 E-value=3.4e-09 Score=84.17 Aligned_cols=81 Identities=17% Similarity=0.313 Sum_probs=62.6
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVS 78 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~ 78 (123)
+|..++||.+...+..+.|.|.++..+|+|.|+|.|.|.+|.+...+.|... .||.+...+. ...+..+.|.|.+.
T Consensus 424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~-~~P~~~~~~~~~~~~~g~~~~l~c~~~ 502 (570)
T 3b43_A 424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK-APPRFVKKLSDISTVVGEEVQLQATIE 502 (570)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC-CCCEEEECCCCBCCBTTCCEEEEEEEE
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec-cCCcccccCCCceecCCCeEEEEEEEe
Confidence 4567789988877778899999999999999999999999999987766643 3444443222 22578899999998
Q ss_pred CCCCC
Q psy17207 79 SYTPL 83 (123)
Q Consensus 79 s~~pi 83 (123)
+.+++
T Consensus 503 g~p~~ 507 (570)
T 3b43_A 503 GAEPI 507 (570)
T ss_dssp SCSSC
T ss_pred cCCCC
Confidence 77654
No 19
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.97 E-value=1.5e-09 Score=72.15 Aligned_cols=51 Identities=24% Similarity=0.208 Sum_probs=41.1
Q ss_pred ccccCCCEEEEEc-------CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETR-------GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~-------~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+... ...+.|.|.++...|+|.|+|+|+|.+|.+..++.|..
T Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v 97 (126)
T 1he7_A 40 VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 97 (126)
T ss_dssp ECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEE
Confidence 5667777654321 13578999999999999999999999999999888765
No 20
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.95 E-value=7e-10 Score=69.21 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=36.5
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
+|..++|+.+...+..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 44 ~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 84 (93)
T 1waa_A 44 PLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTKS 84 (93)
T ss_dssp ECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEEE
T ss_pred ECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCcE
Confidence 56778899998888889999999999999999999999643
No 21
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.95 E-value=1.3e-09 Score=68.17 Aligned_cols=51 Identities=27% Similarity=0.487 Sum_probs=43.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+...+....|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 53 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 53 QLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 355678888877777789999999999999999999999999998777654
No 22
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.94 E-value=1.9e-09 Score=68.07 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=33.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|.|.++..+|+|.|+|+|+|.+|.+..++.|..
T Consensus 61 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V 96 (103)
T 1wwb_X 61 HGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF 96 (103)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 456999999999999999999999999999988875
No 23
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.94 E-value=8.3e-09 Score=72.05 Aligned_cols=72 Identities=17% Similarity=0.211 Sum_probs=53.2
Q ss_pred cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcc
Q psy17207 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEE 85 (123)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~ 85 (123)
.+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|. ..|..+.+........+..+.|.|.+.+.+|...
T Consensus 50 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~ 123 (202)
T 1vca_A 50 EGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDR 123 (202)
T ss_dssp ETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGG
T ss_pred cCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCC
Confidence 34567899999999999999999999999887766555 4555444433222236788999999987666543
No 24
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=1.9e-09 Score=67.44 Aligned_cols=54 Identities=17% Similarity=0.402 Sum_probs=43.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCc
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~ 57 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|..| ...+.|..+|.|+
T Consensus 49 ~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~--~~~l~V~~~P~pp 102 (104)
T 2e6p_A 49 KVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA--FFGVTVQDPSGPS 102 (104)
T ss_dssp ECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC--CEEEEEECCCCSS
T ss_pred ECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE--EEEEEEcCCCCCc
Confidence 35567889888778888999999999999999999999865 4455566666554
No 25
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.92 E-value=9e-10 Score=68.70 Aligned_cols=43 Identities=21% Similarity=0.409 Sum_probs=37.9
Q ss_pred CccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 1 MRLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 1 ~~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
++|..++||.+...+..+.|.|.+++.+|+|.|+|+|.|..+.
T Consensus 44 ~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 86 (91)
T 2lvc_A 44 QEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAY 86 (91)
T ss_dssp SCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCEEE
T ss_pred EEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceEEE
Confidence 3678889999998888999999999999999999999886443
No 26
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=3.7e-09 Score=67.73 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
++|+.+...+..+.|.|.+++.+|+|.|+|.|.|.+|.....+.|..
T Consensus 67 ~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 67 TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEE
T ss_pred CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEE
Confidence 46777776677788999999999999999999999999888777664
No 27
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=66.06 Aligned_cols=42 Identities=29% Similarity=0.499 Sum_probs=37.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
+|..++|+.+...+..+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 35 ~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 76 (84)
T 2lu7_A 35 RLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRI 76 (84)
T ss_dssp ECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTCEE
T ss_pred EccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEEEE
Confidence 578889999998888899999999999999999999886443
No 28
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.90 E-value=8.9e-09 Score=70.46 Aligned_cols=85 Identities=14% Similarity=0.226 Sum_probs=57.2
Q ss_pred CCCEEEEE---cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeCCC
Q psy17207 6 TERRIMET---RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (123)
Q Consensus 6 d~R~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~s~ 80 (123)
.+|+.+.. .....+|.|.+++.+|+|.|+|.|.|..|.....+.|. ..|..+..........+..+.|.|.+...
T Consensus 69 ~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 69 KGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBC
T ss_pred ccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCC
Confidence 45666642 22456899999999999999999999999888776655 44544443322223357889999999433
Q ss_pred CCCcceEEEeE
Q psy17207 81 TPLEEFKIKYR 91 (123)
Q Consensus 81 ~pi~~y~v~yr 91 (123)
.|...|. ||+
T Consensus 149 ~p~~~v~-W~~ 158 (214)
T 3jz7_A 149 SLPLQFE-WQK 158 (214)
T ss_dssp CSSCEEE-EEE
T ss_pred CCCCEEE-EEE
Confidence 3333454 344
No 29
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.90 E-value=4.6e-09 Score=64.59 Aligned_cols=48 Identities=25% Similarity=0.268 Sum_probs=42.4
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|+.+...+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 50 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 97 (100)
T 3irg_A 50 EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 457888887777889999999999999999999999999988877654
No 30
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.89 E-value=2.2e-08 Score=79.54 Aligned_cols=82 Identities=24% Similarity=0.359 Sum_probs=61.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCCC---CCCCeEEEEEE
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQG---RLPNSYNITWM 76 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~---~~~~~~~L~w~ 76 (123)
+|..+.|+.+...+..+.|.|.+++.+|+|.|+|.|.|..|.......|.. .+.||.+...... ..+..+.|.|.
T Consensus 45 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~ 124 (570)
T 3b43_A 45 KLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECR 124 (570)
T ss_dssp BCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEE
T ss_pred EccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEE
Confidence 466778888876677889999999999999999999999999887655543 3445555433221 14678999999
Q ss_pred eCCCCCC
Q psy17207 77 VSSYTPL 83 (123)
Q Consensus 77 ~~s~~pi 83 (123)
+.+.+|.
T Consensus 125 ~~g~p~~ 131 (570)
T 3b43_A 125 INGSEPL 131 (570)
T ss_dssp EESSSSC
T ss_pred EccCCCC
Confidence 9876654
No 31
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.89 E-value=2.7e-08 Score=71.32 Aligned_cols=81 Identities=20% Similarity=0.258 Sum_probs=58.7
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC----CCCCCeEEEEEEe
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ----GRLPNSYNITWMV 77 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~----~~~~~~~~L~w~~ 77 (123)
+|..+.++.+...+....|.|.+++..|+|.|+|.|.|..|.....+.|.....| .+..... ...+..+.|.|.+
T Consensus 45 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p-~~~~~~~~~~~v~~g~~~~l~C~~ 123 (284)
T 2rik_A 45 EIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP-RFIKKLEPSRIVKQDEHTRYECKI 123 (284)
T ss_dssp ECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-EEEECCCSEEEEETTCCEEEEEEE
T ss_pred ECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCC-cccccCCCceEecCCceEEEEEEE
Confidence 3556678877766778899999999999999999999999998887766643222 2221111 1246788999998
Q ss_pred CCCCCC
Q psy17207 78 SSYTPL 83 (123)
Q Consensus 78 ~s~~pi 83 (123)
.+.++.
T Consensus 124 ~g~p~~ 129 (284)
T 2rik_A 124 GGSPEI 129 (284)
T ss_dssp ESSSCC
T ss_pred eeeCCC
Confidence 776443
No 32
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.89 E-value=9.2e-09 Score=70.35 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=52.2
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEe--ccCCCceeecCCCCCCCCeEEEEEEeCCC
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELS--GKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~--~~P~p~~~~~~~~~~~~~~~~L~w~~~s~ 80 (123)
.++|+.+..++ .|.|.+++.+|+|.|+|.|.|..|.. ...+.|. ..+..|.+.. ....+.|.|.+.+.
T Consensus 51 ~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~-----~~~~v~L~C~~~g~ 122 (176)
T 1hng_A 51 KSGAFEILANG---DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYW-----ECSNATLTCEVLEG 122 (176)
T ss_dssp SSTTEEECTTS---CEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCCCEEEE-----ETTTTEEEEECSSC
T ss_pred CCCeEEECCCC---cEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCCCEEEe-----cCCcEEEEEEecCC
Confidence 46788885433 59999999999999999999999987 5555544 3444344332 12348899998887
Q ss_pred CCCcceE
Q psy17207 81 TPLEEFK 87 (123)
Q Consensus 81 ~pi~~y~ 87 (123)
++ ..|.
T Consensus 123 p~-p~i~ 128 (176)
T 1hng_A 123 TD-VELK 128 (176)
T ss_dssp SS-CEEE
T ss_pred CC-cEEE
Confidence 66 3444
No 33
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.88 E-value=1.4e-08 Score=70.24 Aligned_cols=84 Identities=17% Similarity=0.239 Sum_probs=56.9
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce---eE--EEEEEeccC-CCceeecCCCC---CCCCeEEEEE
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK---HR--AYLELSGKP-NPAIFRSHPQG---RLPNSYNITW 75 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~--~~i~l~~~P-~p~~~~~~~~~---~~~~~~~L~w 75 (123)
.++|+.+...+....|.|.+++.+|+|.|+|.|.|..|. .. ..+.|...| .+|.+...+.. ..+..+.|.|
T Consensus 57 ~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 136 (213)
T 3mj8_L 57 IPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVC 136 (213)
T ss_dssp SCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEE
T ss_pred ccCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEE
Confidence 457998877777889999999999999999999999982 22 244454333 34444322111 1478899999
Q ss_pred EeCCC-CCCcceEE
Q psy17207 76 MVSSY-TPLEEFKI 88 (123)
Q Consensus 76 ~~~s~-~pi~~y~v 88 (123)
.+.+. +|...+.|
T Consensus 137 ~~~g~~p~~~~v~W 150 (213)
T 3mj8_L 137 MINGFYPADVAVTW 150 (213)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EeeceeCCCeEEEE
Confidence 98764 33234443
No 34
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.88 E-value=1.1e-08 Score=69.32 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=59.8
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCcee-e--cCCCCCCCCeEEEEEE
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIF-R--SHPQGRLPNSYNITWM 76 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~-~--~~~~~~~~~~~~L~w~ 76 (123)
++..+.|+.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.. .|..... . .......+..+.|.|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~ 126 (197)
T 3lcy_A 47 ELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVM 126 (197)
T ss_dssp EECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEE
T ss_pred ECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEE
Confidence 345678888888788889999999999999999999999999887665543 2211100 0 0000124678999999
Q ss_pred eCCCCCCcceEE
Q psy17207 77 VSSYTPLEEFKI 88 (123)
Q Consensus 77 ~~s~~pi~~y~v 88 (123)
+.+.++.. +.|
T Consensus 127 ~~~~p~p~-v~W 137 (197)
T 3lcy_A 127 YIGRPVPA-MTW 137 (197)
T ss_dssp EEEESCCE-EEE
T ss_pred EeeeeCCe-eEE
Confidence 88766553 443
No 35
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.88 E-value=9.3e-09 Score=71.08 Aligned_cols=85 Identities=18% Similarity=0.195 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce---eE--EEEEEeccCCCceeecCCC---CCCCCeEEEEEEe
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK---HR--AYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~--~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~ 77 (123)
++||.+...+....|.|.+++.+|+|.|+|.|.|..|. .. ..+.|...+.+|.+..... ...+..+.|.|.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~ 138 (213)
T 3nl4_L 59 PSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVA 138 (213)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEE
T ss_pred CccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEE
Confidence 57998887777889999999999999999999998773 11 2344444444554432111 1146789999999
Q ss_pred CCCCCCcceEEEeE
Q psy17207 78 SSYTPLEEFKIKYR 91 (123)
Q Consensus 78 ~s~~pi~~y~v~yr 91 (123)
.+..|...+. ||+
T Consensus 139 ~g~~P~~~v~-W~k 151 (213)
T 3nl4_L 139 NKYFPDVTVT-WEV 151 (213)
T ss_dssp EEEBSCCEEE-EEE
T ss_pred ecccCCcEEE-EEe
Confidence 8733433444 344
No 36
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=4.7e-09 Score=66.40 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=41.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~ 55 (123)
+|..++|+.+...+..+.|.|.+++.+|+|.|+|.|.|. ...+.+.|..+|.
T Consensus 49 ~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~--~~~a~L~V~~~p~ 100 (104)
T 2eny_A 49 TVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGL--TSKASLIVRERSG 100 (104)
T ss_dssp BCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTE--EEEECEEEECCCS
T ss_pred ECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCe--eEEEEEEEeCCCc
Confidence 567788999988888899999999999999999999774 3344455555543
No 37
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.88 E-value=1.7e-08 Score=71.04 Aligned_cols=88 Identities=18% Similarity=0.173 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee---EEEEEEeccCC---CceeecCC---CCCCCCeEEEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPN---PAIFRSHP---QGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~i~l~~~P~---p~~~~~~~---~~~~~~~~~L~w~ 76 (123)
++|+.+...+...+|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+. ++.+...+ ....+..+.|.|.
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 142 (240)
T 1moe_A 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCT 142 (240)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEE
T ss_pred CccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEE
Confidence 579988776778899999999999999999999986642 23444544331 22221111 1125788999999
Q ss_pred eCCCCCCcceEEEeEEc
Q psy17207 77 VSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 77 ~~s~~pi~~y~v~yr~~ 93 (123)
+.+.++......||+..
T Consensus 143 ~~g~p~~~~~v~W~k~~ 159 (240)
T 1moe_A 143 ASGFNIKDTYMHWVKQR 159 (240)
T ss_dssp EESSCGGGSCEEEEEEC
T ss_pred EcCccCCCCEEEEEEEC
Confidence 98765432335567764
No 38
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.88 E-value=1.7e-08 Score=68.47 Aligned_cols=80 Identities=24% Similarity=0.224 Sum_probs=57.1
Q ss_pred CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCC---CCCCCeEEEEEEeCCCCC
Q psy17207 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQ---GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 8 R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~p 82 (123)
|+.+...+....|.|.+++..|+|.|+|.|.|..|.....+.|.. .+.||.+...+. ...+..+.|.|.+.+.++
T Consensus 53 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 132 (194)
T 2a38_A 53 GVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPT 132 (194)
T ss_dssp TCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESC
T ss_pred ceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecC
Confidence 666655566789999999999999999999999999887655543 334444443221 124678999999977655
Q ss_pred CcceEE
Q psy17207 83 LEEFKI 88 (123)
Q Consensus 83 i~~y~v 88 (123)
.. +.|
T Consensus 133 ~~-v~W 137 (194)
T 2a38_A 133 PV-VKF 137 (194)
T ss_dssp CE-EEE
T ss_pred Ce-EEE
Confidence 53 443
No 39
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.88 E-value=9.7e-09 Score=76.78 Aligned_cols=76 Identities=29% Similarity=0.364 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~p 82 (123)
+.|+.+......+.|.|.+++.+|+|.|+|.|.|..|.....+.|...- +|.+..... ...+..+.|.|.+.+.++
T Consensus 51 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 129 (389)
T 2jll_A 51 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY-APKFISNQTIYYSWEGNPINISCDVKSNPP 129 (389)
T ss_dssp SSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-EEEECCSCCEEEECTTCCEEEEECEEEESC
T ss_pred CCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEe-CCEEecCcceEEeccCCEEEEEEEEEecCC
Confidence 6789887766788999999999999999999999999998876665421 122222111 124678899998877654
No 40
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=9.6e-09 Score=64.78 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=40.6
Q ss_pred CCCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCc
Q psy17207 6 TERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA 57 (123)
Q Consensus 6 d~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~ 57 (123)
++|+.+... .....|.|.+++.+|+|.|+|.|.|.+|.....+.|. ..|.+|
T Consensus 53 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 53 SDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp CSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEECCSCCS
T ss_pred CCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEECCCCCC
Confidence 578887654 3345899999999999999999999999998765444 445443
No 41
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.87 E-value=4.4e-09 Score=67.37 Aligned_cols=51 Identities=24% Similarity=0.232 Sum_probs=40.2
Q ss_pred cccCCCEEEEEcC----CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 3 LETTERRIMETRG----SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 3 l~~d~R~~i~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
|..+.|+.+.... ..+.|.|.+++..|+|.|+|+|.|.+|.+.+++.|...
T Consensus 46 l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 46 LRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred CCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 4455556553211 35689999999999999999999999999999888653
No 42
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.87 E-value=8.6e-09 Score=63.54 Aligned_cols=50 Identities=22% Similarity=0.200 Sum_probs=41.0
Q ss_pred cccCCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
|..++|+.+. ..+....|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 46 IERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96 (99)
T ss_dssp CCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEE
Confidence 4556677654 3456779999999999999999999999999998877654
No 43
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.86 E-value=2.5e-08 Score=71.55 Aligned_cols=84 Identities=21% Similarity=0.361 Sum_probs=60.0
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCC
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSS 79 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s 79 (123)
+..+.++.+...+....|.|.+++..|.|.|+|.|.|..|.....+.|.... +|.+...+ ....+..+.|.|.+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g 218 (284)
T 2rik_A 140 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-PPVFRKKPHPVETLKGADVHLECELQG 218 (284)
T ss_dssp CCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-CCBCCSCCCCEEECTTCCEEEEEECBS
T ss_pred CcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec-CCcceeCCCcceecCCCeEEEEEEEEe
Confidence 4456677776666788999999999999999999999999998877666432 22222111 1124678999999988
Q ss_pred CCCCcceEE
Q psy17207 80 YTPLEEFKI 88 (123)
Q Consensus 80 ~~pi~~y~v 88 (123)
.++. .+.|
T Consensus 219 ~p~~-~v~W 226 (284)
T 2rik_A 219 TPPF-QVSW 226 (284)
T ss_dssp SSCC-EEEE
T ss_pred cCCC-EEEE
Confidence 7654 3443
No 44
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.85 E-value=6.2e-09 Score=85.01 Aligned_cols=84 Identities=15% Similarity=0.120 Sum_probs=61.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCce-eEE--EEEEeccCCCceeecCCCCCCCCeEEEEEEeC---CCCCCcceEEEe
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGK-HRA--YLELSGKPNPAIFRSHPQGRLPNSYNITWMVS---SYTPLEEFKIKY 90 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~-~~~--~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~---s~~pi~~y~v~y 90 (123)
.+.|.|.++...|+|.|+|+|.|.+|. ... .+.+..+|.++..... .......+.|.|.++ +..||..|.|+|
T Consensus 222 ~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~-~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~ 300 (731)
T 2v5y_A 222 IASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQL-ASVGATYLWIQLNANSINGDGPIVAREVEY 300 (731)
T ss_dssp EEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEE-EEECSSCEEEECCCSSBSSCSCCCEEEEEE
T ss_pred eEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcce-eccCCceEEEEeCCcccCCCCccEEEEEEE
Confidence 578999999999999999999999998 443 4555555554322111 112467899999964 448999999999
Q ss_pred EEcCCCCCCceeee
Q psy17207 91 RKIPGNEPSPMSNQ 104 (123)
Q Consensus 91 r~~~~~~~~w~~~~ 104 (123)
+... ..|....
T Consensus 301 ~~~~---~~~~~~~ 311 (731)
T 2v5y_A 301 CTAS---GSWNDRQ 311 (731)
T ss_dssp EESS---SSCEEEE
T ss_pred EECC---CCceEEe
Confidence 9863 5686544
No 45
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.84 E-value=7.2e-09 Score=63.88 Aligned_cols=46 Identities=28% Similarity=0.351 Sum_probs=38.8
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.|+.+...+....|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 51 ~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 51 RRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp TEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEE
Confidence 4556665666778999999999999999999999999998877654
No 46
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.84 E-value=5.6e-09 Score=73.20 Aligned_cols=72 Identities=19% Similarity=0.245 Sum_probs=51.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFK 87 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~ 87 (123)
....|.|.+++.+|+|.|+|.|.|..|.....+.+...+.+...........+..+.|.|.+.+..|...+.
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~ 152 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQ 152 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEE
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEE
Confidence 467899999999999999999999999999988877644332222111122467888999987653433444
No 47
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.84 E-value=5.5e-08 Score=70.52 Aligned_cols=83 Identities=22% Similarity=0.273 Sum_probs=61.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc--------------------CCCceeec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--------------------PNPAIFRS 61 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~--------------------P~p~~~~~ 61 (123)
+|..++|+.+...+....|.|.+++.+|.|.|+|.|.|..|....++.|.+. +.|.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 227 (317)
T 2y25_A 148 AIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG 227 (317)
T ss_dssp BCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEB
T ss_pred ECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccccc
Confidence 4567789988887888899999999999999999999999999998887531 11222211
Q ss_pred CCC---CCCCCeEEEEEEeCCCCCCc
Q psy17207 62 HPQ---GRLPNSYNITWMVSSYTPLE 84 (123)
Q Consensus 62 ~~~---~~~~~~~~L~w~~~s~~pi~ 84 (123)
.+. ...+..+.|.|.+.+.++..
T Consensus 228 ~~~~~~v~~g~~~~l~C~~~g~p~p~ 253 (317)
T 2y25_A 228 LPDVVTIQEGKALNLTCNVWGDPPPE 253 (317)
T ss_dssp CCSEEEEETTSBBCEEEEEECSSCCE
T ss_pred CCccEEEEcCCEEEEEEEEecCCCCE
Confidence 111 12467889999998776553
No 48
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.83 E-value=1.3e-08 Score=69.87 Aligned_cols=78 Identities=17% Similarity=0.126 Sum_probs=55.3
Q ss_pred ccCCCEEEEEcC---CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCCCCCCCeEEEEEEeC
Q psy17207 4 ETTERRIMETRG---SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVS 78 (123)
Q Consensus 4 ~~d~R~~i~~~~---~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~ 78 (123)
..++|+.+.... ....|.|.+++.+|+|.|+|.|.|..|.....+.|.. .|..|.+... ....+..+.|.|.+.
T Consensus 50 ~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~~~~-~~~~g~~v~l~C~~~ 128 (202)
T 3bp6_B 50 LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRIL-EVPGTGEVQLTCQAR 128 (202)
T ss_dssp CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEEEE-ECTTTCCEEEEEEEE
T ss_pred ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCCcccEEEE-ecCCCCeEEEEEEcc
Confidence 344677665321 4578999999999999999999999998877766654 3444433321 112478899999997
Q ss_pred CCCC
Q psy17207 79 SYTP 82 (123)
Q Consensus 79 s~~p 82 (123)
+++.
T Consensus 129 g~P~ 132 (202)
T 3bp6_B 129 GYPL 132 (202)
T ss_dssp EBSC
T ss_pred ccCC
Confidence 7544
No 49
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.83 E-value=1.7e-08 Score=73.09 Aligned_cols=86 Identities=14% Similarity=0.200 Sum_probs=59.8
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--------------cCCCceeec-CCCCC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--------------KPNPAIFRS-HPQGR 66 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--------------~P~p~~~~~-~~~~~ 66 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|..|... ++.|.. .|..+.... .....
T Consensus 42 ~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 120 (312)
T 2y23_A 42 STEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEIL 120 (312)
T ss_dssp ECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEEC
T ss_pred ECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEe
Confidence 45667899998888889999999999999999999999999766 444442 232222111 11122
Q ss_pred CCCeEEEEEEeCCCCCCcceEE
Q psy17207 67 LPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 67 ~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+..+.|.|.+....|...+.|
T Consensus 121 ~G~~v~l~C~~~~~~p~~~v~W 142 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSGNAKVNY 142 (312)
T ss_dssp SSSCEEEEEEESCCCSSCEEEE
T ss_pred eCCCEEEEEEEEeCCCCCEEEE
Confidence 5678999999984444444553
No 50
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.83 E-value=7.7e-09 Score=63.44 Aligned_cols=42 Identities=21% Similarity=0.426 Sum_probs=35.8
Q ss_pred EEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 11 METRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 11 i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+......+.|.|.++..+|+|.|+|.|.|.+|.+..++.|..
T Consensus 51 ~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 51 VDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEE
Confidence 333455789999999999999999999999999998887753
No 51
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.81 E-value=2e-08 Score=69.34 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceeecCCCC---CCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~~~~~~---~~~~~~~L~w~~~s 79 (123)
++||.+...+....|.|.+++.+|+|.|+|.|.|..|... ..+.|...+.+|.+...+.. ..+..+.|.|.+.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g 138 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNN 138 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEee
Confidence 5789887667788999999999999999999999875333 23444333445544321111 13567999999876
Q ss_pred CCC-CcceE
Q psy17207 80 YTP-LEEFK 87 (123)
Q Consensus 80 ~~p-i~~y~ 87 (123)
.+| ...+.
T Consensus 139 ~~p~~~~v~ 147 (213)
T 3r06_A 139 FYPKDINVK 147 (213)
T ss_dssp EBSSCEEEE
T ss_pred ecCCceEEE
Confidence 544 33444
No 52
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.81 E-value=5.2e-08 Score=65.94 Aligned_cols=81 Identities=20% Similarity=0.176 Sum_probs=56.0
Q ss_pred cCCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCC-ceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCC
Q psy17207 5 TTERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSS 79 (123)
Q Consensus 5 ~d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s 79 (123)
.+.|+.+.. .+..+.|.|.+++.+|+|.|+|.|.|.. |.....+.|..... |.+...+ ....+..+.|.|.+.+
T Consensus 48 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~~~g 126 (191)
T 1epf_A 48 NQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQK-LMFKNAPTPQEFKEGEDAVIVCDVVS 126 (191)
T ss_dssp BSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECC-SEEEECCSSEECCTTSCEEECCEEEC
T ss_pred CCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecC-ceEecCCCcEeecCCCeEEEEEEECC
Confidence 456777653 3567899999999999999999999998 55566666654322 2222111 1125778999999987
Q ss_pred CCCCcceE
Q psy17207 80 YTPLEEFK 87 (123)
Q Consensus 80 ~~pi~~y~ 87 (123)
.++.. +.
T Consensus 127 ~p~~~-v~ 133 (191)
T 1epf_A 127 SLPPT-II 133 (191)
T ss_dssp SSCCE-EE
T ss_pred CCCCE-EE
Confidence 76654 44
No 53
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.81 E-value=1.9e-08 Score=69.56 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=53.3
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCCC-CCCC-eEEEEEEeCCCCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQG-RLPN-SYNITWMVSSYTP 82 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~-~~~~-~~~L~w~~~s~~p 82 (123)
+|+.+. ..++|+|.+++.+|+|.|+|.|.|..|.....+.|.. .|..|.+...... ..+. .+.|.|.+.+.+|
T Consensus 62 ~R~~~~---~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p 138 (193)
T 2if7_A 62 KRLNFT---QSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD 138 (193)
T ss_dssp TTEEEC---TTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCT
T ss_pred ccEEEC---CCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCC
Confidence 466665 2468999999999999999999999998766655554 3333443322211 1233 7999999988654
Q ss_pred CcceEE
Q psy17207 83 LEEFKI 88 (123)
Q Consensus 83 i~~y~v 88 (123)
...|.|
T Consensus 139 ~p~i~W 144 (193)
T 2if7_A 139 NVSFRW 144 (193)
T ss_dssp TCEEEE
T ss_pred ceEEEE
Confidence 445553
No 54
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.81 E-value=2e-08 Score=70.57 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=55.3
Q ss_pred ccccCCCEEEEEcC--CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--cc------------------CCCcee
Q psy17207 2 RLETTERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GK------------------PNPAIF 59 (123)
Q Consensus 2 ~l~~d~R~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~------------------P~p~~~ 59 (123)
+|..++||.+..++ ....|.|.+++.+|+|.|+|.|.| |.+...+.+. .. ..+|.|
T Consensus 43 ~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 120 (207)
T 3rbs_A 43 EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 120 (207)
T ss_dssp EECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEE
T ss_pred ECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCce
Confidence 46677888876544 456899999999999999999999 5555443321 10 024443
Q ss_pred ecCC--CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 60 RSHP--QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 60 ~~~~--~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.... ....+..+.|.|.+.+..|...+.|
T Consensus 121 ~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W 151 (207)
T 3rbs_A 121 VEYLSWEVTGECNVLLKCKVANIKKETHIVW 151 (207)
T ss_dssp EEEEEEEEETTTEEEEEEEEESCCTTCEEEE
T ss_pred EecCCcEEcCCCcEEEEEEEeCCCCCCEEEE
Confidence 3211 1124778999999887744444553
No 55
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.81 E-value=4.2e-08 Score=67.09 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=53.8
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc--eeEEE--EEEeccCCCceeecCCCCCCCCeEEEEEE-eCC
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG--KHRAY--LELSGKPNPAIFRSHPQGRLPNSYNITWM-VSS 79 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G--~~~~~--i~l~~~P~p~~~~~~~~~~~~~~~~L~w~-~~s 79 (123)
.+.|+.+.. +.|.|.+++..|+|.|+|.|.|..| ..... +.|..+|..+..........+..+.|.|. +.+
T Consensus 56 ~~~r~~~~~----~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 131 (212)
T 1f97_A 56 YADRVTFSS----SGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDG 131 (212)
T ss_dssp GTTTEEEET----TEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCC
T ss_pred ccCcEEeec----eeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccC
Confidence 356777653 6899999999999999999999977 33444 44445565554443222235788999999 566
Q ss_pred CCCCcceEE
Q psy17207 80 YTPLEEFKI 88 (123)
Q Consensus 80 ~~pi~~y~v 88 (123)
.++. .+.|
T Consensus 132 ~p~~-~i~W 139 (212)
T 1f97_A 132 SPPS-EYSW 139 (212)
T ss_dssp BSCC-EEEE
T ss_pred cCCC-EEEE
Confidence 5554 4443
No 56
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.80 E-value=1.5e-08 Score=70.17 Aligned_cols=81 Identities=16% Similarity=0.295 Sum_probs=53.6
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce---eE----EEEEEeccC-CCceeecCCCC---CCCCeEEEEE
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK---HR----AYLELSGKP-NPAIFRSHPQG---RLPNSYNITW 75 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~----~~i~l~~~P-~p~~~~~~~~~---~~~~~~~L~w 75 (123)
+|+.+...+....|.|.+++.+|+|.|+|.|.|..|. .. ..+.|...| .+|.+...... .....+.|.|
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C 143 (218)
T 3s96_B 64 DRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVC 143 (218)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEE
T ss_pred cceEEecCCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEE
Confidence 5888876677889999999999999999999998872 11 234444433 34443321111 1347899999
Q ss_pred EeCCCCC-CcceE
Q psy17207 76 MVSSYTP-LEEFK 87 (123)
Q Consensus 76 ~~~s~~p-i~~y~ 87 (123)
.+.+..| ...+.
T Consensus 144 ~~~g~~p~~~~v~ 156 (218)
T 3s96_B 144 LISNFSPSGVTVA 156 (218)
T ss_dssp EEEEEBSSCCEEE
T ss_pred EECcccCCCeEEE
Confidence 9876433 22444
No 57
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=1.8e-08 Score=63.75 Aligned_cols=51 Identities=16% Similarity=0.335 Sum_probs=40.5
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P 54 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.| ......+.|...|
T Consensus 52 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p 102 (113)
T 2cpc_A 52 EVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD--ESASFTVTVTEPP 102 (113)
T ss_dssp ECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS--CEEEEEEEEECCC
T ss_pred ECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec--CcEEEEEEEecCC
Confidence 35567888888777778999999999999999999999 4445555666555
No 58
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=62.89 Aligned_cols=49 Identities=20% Similarity=0.476 Sum_probs=40.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P 54 (123)
+|..+.|+.+. ...|.|.+++..|+|.|+|+|.|..|.....+.|....
T Consensus 42 ~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 90 (99)
T 2cr3_A 42 QLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSD 90 (99)
T ss_dssp BCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCS
T ss_pred ECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEec
Confidence 34556677764 35899999999999999999999999999888887643
No 59
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=1.3e-08 Score=63.91 Aligned_cols=55 Identities=31% Similarity=0.442 Sum_probs=40.3
Q ss_pred cccCCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCc
Q psy17207 3 LETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA 57 (123)
Q Consensus 3 l~~d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~ 57 (123)
|..+.++.+. .......|.|.+++.+|+|.|+|.|.|..|....++.|. ..|.+|
T Consensus 50 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 50 VRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp CCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCCCSS
T ss_pred CCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCCCCC
Confidence 4445555443 333456899999999999999999999999988865555 445443
No 60
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.79 E-value=3.1e-08 Score=68.77 Aligned_cols=82 Identities=15% Similarity=0.196 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc-ee---EEEEEEeccCCCceeecCCCC---CCCCeEEEEEEeC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG-KH---RAYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVS 78 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G-~~---~~~i~l~~~P~p~~~~~~~~~---~~~~~~~L~w~~~ 78 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..| .. ...+.|...+.+|.+...... ..+..+.|.|.+.
T Consensus 60 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 139 (216)
T 2xzc_L 60 PDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 139 (216)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred CCceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEE
Confidence 4688887667788999999999999999999999987 11 123445444445544321111 1356899999987
Q ss_pred CCCCC-cceE
Q psy17207 79 SYTPL-EEFK 87 (123)
Q Consensus 79 s~~pi-~~y~ 87 (123)
+..|. ..+.
T Consensus 140 g~~P~~~~v~ 149 (216)
T 2xzc_L 140 NFYPREAKVQ 149 (216)
T ss_dssp EEBSSCCEEE
T ss_pred eEcCCceEEE
Confidence 64333 3444
No 61
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.79 E-value=8.5e-09 Score=63.65 Aligned_cols=47 Identities=21% Similarity=0.507 Sum_probs=39.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+. .+.|.|.+++.+|+|.|+|+|.|.+|.....+.|..
T Consensus 48 ~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 48 QLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp CCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 35566787764 358999999999999999999999999988877653
No 62
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.78 E-value=2.2e-08 Score=71.96 Aligned_cols=86 Identities=23% Similarity=0.259 Sum_probs=57.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE-EEEEEec--cCCCceeecCCCCCCCCeEEEEEEeC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-AYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVS 78 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~ 78 (123)
.+..+.|+.+...+....|.|.+++..|+|.|+|.|.|..|... ..+.|.. .|.............+..+.|.|.+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~ 123 (291)
T 2wim_A 44 KIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVS 123 (291)
T ss_dssp BCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCB
T ss_pred CccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEc
Confidence 34566889888778888999999999999999999999999874 3444443 22211111111112467888999887
Q ss_pred CCCCCcceEE
Q psy17207 79 SYTPLEEFKI 88 (123)
Q Consensus 79 s~~pi~~y~v 88 (123)
+.++. .+.|
T Consensus 124 ~~p~~-~v~W 132 (291)
T 2wim_A 124 SSPAP-AVSW 132 (291)
T ss_dssp CSSCC-EEEE
T ss_pred cCCCC-EEEE
Confidence 65543 3443
No 63
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.78 E-value=3.7e-08 Score=68.08 Aligned_cols=77 Identities=19% Similarity=0.208 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeec-CCC--CCCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s 79 (123)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..|.... .+.|...+.+|.+.. .+. ...+..+.|.|.+.+
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g 137 (210)
T 1lk3_L 58 PARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNN 137 (210)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred cccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEe
Confidence 37888876677789999999999999999999999875432 344544333444332 111 114678999999876
Q ss_pred CCC
Q psy17207 80 YTP 82 (123)
Q Consensus 80 ~~p 82 (123)
..|
T Consensus 138 ~~p 140 (210)
T 1lk3_L 138 FYP 140 (210)
T ss_dssp EBS
T ss_pred EeC
Confidence 433
No 64
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=4.2e-09 Score=65.70 Aligned_cols=45 Identities=31% Similarity=0.461 Sum_probs=36.7
Q ss_pred CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccC
Q psy17207 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (123)
Q Consensus 8 R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P 54 (123)
||.+...+....|.|.+++.+|+|.|+|.|.| +...+.+.|.++|
T Consensus 57 ~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~~~~~~l~V~~~P 101 (101)
T 2edk_A 57 RYRFKKDGKRHILIFSDVVQEDRGRYQVITNG--GQCEAELIVEEKQ 101 (101)
T ss_dssp CCEEEECSSEEEEECSSCCGGGCSBEEEECSS--CEECCBEEEECCC
T ss_pred eEEEEECCCEEEEEECCCChhhCEEEEEEEcC--CcEEEEEEEeCCC
Confidence 88888888888999999999999999999998 4444555555543
No 65
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.77 E-value=3.4e-08 Score=68.22 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=52.8
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeec-CCC--CCCCCeEEEEEEeCCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSSY 80 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s~ 80 (123)
+|+.+...+....|.|.+++.+|+|.|+|.|.|..|.... .+.|...+.+|.+.. .+. ...+..+.|.|.+.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~ 139 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee
Confidence 7898877777889999999999999999999999876532 445544433444332 111 1135689999998763
No 66
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.77 E-value=1.2e-08 Score=64.07 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=42.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|..+...+.+.|..
T Consensus 47 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~l~V~~ 97 (106)
T 2dlt_A 47 EVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSAKLNFLE 97 (106)
T ss_dssp BCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSCCCCCBCEEEEC
T ss_pred ECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCCceEEEEEEEEE
Confidence 466778999987788889999999999999999999999555555565553
No 67
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.77 E-value=2.2e-08 Score=69.98 Aligned_cols=82 Identities=15% Similarity=0.248 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceeecCCCC---CCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~~~~~~---~~~~~~~L~w~~~s 79 (123)
++||.+...+....|.|.+++.+|+|.|+|.|.|..|... ..+.|...+.+|.+...... ..+..+.|.|.+.+
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~ 161 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 161 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcc
Confidence 5799887667788999999999999999999999876332 24555554555554421111 13567999999877
Q ss_pred CCC-CcceE
Q psy17207 80 YTP-LEEFK 87 (123)
Q Consensus 80 ~~p-i~~y~ 87 (123)
..| ...+.
T Consensus 162 ~~p~~~~v~ 170 (237)
T 3sob_L 162 FYPREAKVQ 170 (237)
T ss_dssp EBSSCCEEE
T ss_pred cCCCceEEE
Confidence 544 33444
No 68
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.77 E-value=2.1e-08 Score=64.37 Aligned_cols=47 Identities=30% Similarity=0.364 Sum_probs=39.6
Q ss_pred CCCEEEEEcCC-EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGS-RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~-~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
++|+.+...+. ..+|.|.+++.+|+|.|+|.|.|..|....++.|..
T Consensus 60 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 107 (116)
T 2kkq_A 60 TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDV 107 (116)
T ss_dssp BTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 57888875543 458999999999999999999999999998776654
No 69
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.76 E-value=3.4e-08 Score=68.50 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=52.2
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE--E--EEEeccCCCceeecCCCCCCCCeEEEEEEeCCC
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--Y--LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY 80 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~--i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~ 80 (123)
.++|+.+..+ ++|.|.+++.+|+|.|+|.|.|..|.... . +.|.....+|.+.. ....+.|.|.+.+.
T Consensus 56 ~~~R~~~~~n---gsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~~ 127 (182)
T 1hnf_A 56 EKDTYKLFKN---GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW-----TCINTTLTCEVMNG 127 (182)
T ss_dssp SCTTEEECTT---SCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE-----ETTTTEEEEECSSC
T ss_pred CCCeEEECCC---CCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE-----ccCcEEEEeEccCC
Confidence 5688888743 38999999999999999999999998643 3 34444333444332 12257899998876
Q ss_pred CCCcceEE
Q psy17207 81 TPLEEFKI 88 (123)
Q Consensus 81 ~pi~~y~v 88 (123)
+++ .|.|
T Consensus 128 p~~-~~~W 134 (182)
T 1hnf_A 128 TDP-ELNL 134 (182)
T ss_dssp SSC-EEEE
T ss_pred CCC-EEEE
Confidence 544 3553
No 70
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.76 E-value=6.2e-08 Score=68.65 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccC-----------------CCceeecCC--
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKP-----------------NPAIFRSHP-- 63 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P-----------------~p~~~~~~~-- 63 (123)
++||.+...+...+|.|.+++.+|+|.|+|.|.|..|.... .+.|...| .++.+....
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (250)
T 3esu_F 62 PSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 141 (250)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCE
T ss_pred CCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCce
Confidence 57898877777889999999999999999999998665332 33343321 111111111
Q ss_pred CCCCCCeEEEEEEeCCCCCCcceEEEeEEcCC
Q psy17207 64 QGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (123)
Q Consensus 64 ~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~~~ 95 (123)
....+..+.|.|.+.+.++......|||....
T Consensus 142 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~ 173 (250)
T 3esu_F 142 LVKPGASVKISCKDSGYAFSSSWMNWVKQRPG 173 (250)
T ss_dssp EECTTCCEEEEEECCSTTGGGSEEEEEEECTT
T ss_pred EEcCCceEEEEEEecCCcccCCEEEEEEECCC
Confidence 11257889999998775432344667887533
No 71
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.76 E-value=9e-08 Score=67.80 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCC----------Cc-eeecCC--CCCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN----------PA-IFRSHP--QGRLPN 69 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~----------p~-~~~~~~--~~~~~~ 69 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..+... ..+.|...|. |+ .+...+ ....+.
T Consensus 64 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 143 (247)
T 1svz_A 64 PDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGE 143 (247)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTC
T ss_pred CCcEEeccCCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCC
Confidence 5788887666778999999999999999999999865422 2344444321 22 111111 122578
Q ss_pred eEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 70 SYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 70 ~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
.+.|.|.+.+.++......|||..
T Consensus 144 ~v~L~C~~~~~~~~~~~v~W~k~~ 167 (247)
T 1svz_A 144 TVKISCKATNYAFTDYSMHWVKQA 167 (247)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEEC
T ss_pred cEEEEEEEcCcccCCcEEEEEEeC
Confidence 899999987664322345577764
No 72
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.75 E-value=5.1e-08 Score=61.73 Aligned_cols=47 Identities=36% Similarity=0.567 Sum_probs=38.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++||.+...+....|.|.+++.+|+|.|+|.| |....++.|..
T Consensus 57 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V 103 (113)
T 2edh_A 57 TLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTV 103 (113)
T ss_dssp BCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEE
T ss_pred ECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEE
Confidence 466778999988888889999999999999999999 55666555554
No 73
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.75 E-value=2.7e-08 Score=67.20 Aligned_cols=79 Identities=23% Similarity=0.281 Sum_probs=54.2
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecC-CCCCCCCeEEEEEEeCCCC
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH-PQGRLPNSYNITWMVSSYT 81 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~-~~~~~~~~~~L~w~~~s~~ 81 (123)
+..++|+.+.. ....|.|.+++..|+|.|+|.|.|..|.....+.|.....|...... .....+..+.|.|.+.+.+
T Consensus 45 ~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p 122 (192)
T 2va4_A 45 IEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEP 122 (192)
T ss_dssp CCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEES
T ss_pred cCCCccEEEeC--CeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCC
Confidence 44556777653 34589999999999999999999999998877665542212111111 1112477899999998765
Q ss_pred CC
Q psy17207 82 PL 83 (123)
Q Consensus 82 pi 83 (123)
+.
T Consensus 123 ~~ 124 (192)
T 2va4_A 123 IP 124 (192)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 74
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.75 E-value=4.5e-08 Score=69.58 Aligned_cols=88 Identities=22% Similarity=0.289 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCC----------Cc-eeec-C-CCCCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN----------PA-IFRS-H-PQGRLPN 69 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~----------p~-~~~~-~-~~~~~~~ 69 (123)
++|+.+...+....|+|.+++.+|+|.|.|.|.|..+... ..+.|...|. ++ .+.. . .....+.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 138 (242)
T 2znx_A 59 PSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQ 138 (242)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTS
T ss_pred CCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCC
Confidence 5799887666778999999999999999999999865322 2344444332 11 1111 1 1123578
Q ss_pred eEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 70 SYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 70 ~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
.+.|.|.+.+.++...+..|||..
T Consensus 139 ~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 139 TLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEEC
T ss_pred eEEEEEEEEccccCCcceeeEeeC
Confidence 999999987654222345577764
No 75
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.75 E-value=3.9e-08 Score=60.60 Aligned_cols=40 Identities=33% Similarity=0.483 Sum_probs=34.9
Q ss_pred EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 13 TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 13 ~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.......|.|.+++..|+|.|+|.|.|.+|....++.|..
T Consensus 57 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 57 SEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp ETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 3444579999999999999999999999999998887765
No 76
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.74 E-value=1.1e-07 Score=65.73 Aligned_cols=85 Identities=20% Similarity=0.193 Sum_probs=57.2
Q ss_pred cCCCEEEEEc-CCEEEEEEcccCC-CCCeeEEEEEEcCCce-eEEEEEEe--ccC----CCceeecCCCC---CCCCeEE
Q psy17207 5 TTERRIMETR-GSRHTLMIRKVVA-SDFGNYSCEATNPMGK-HRAYLELS--GKP----NPAIFRSHPQG---RLPNSYN 72 (123)
Q Consensus 5 ~d~R~~i~~~-~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~-~~~~i~l~--~~P----~p~~~~~~~~~---~~~~~~~ 72 (123)
.+.|+.+... +....|.|.+++. .|+|.|+|.|.|..|. ....+.|. ..+ .+|.+...+.. ..+..+.
T Consensus 50 ~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~ 129 (212)
T 2yd1_A 50 TQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVL 129 (212)
T ss_dssp TSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEE
T ss_pred CcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEE
Confidence 5678877543 4457999999999 9999999999999998 55555544 322 12444332211 1467899
Q ss_pred EEEEeCCCCCCcceEEEeE
Q psy17207 73 ITWMVSSYTPLEEFKIKYR 91 (123)
Q Consensus 73 L~w~~~s~~pi~~y~v~yr 91 (123)
|.|.+.+.++.. +. ||+
T Consensus 130 l~C~~~g~p~p~-i~-W~~ 146 (212)
T 2yd1_A 130 MTCKAIGNPTPN-IY-WIK 146 (212)
T ss_dssp ECCEEECSSCCE-EE-EEE
T ss_pred EEEEeccCCCCe-EE-EEE
Confidence 999998776543 44 444
No 77
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.74 E-value=4.7e-08 Score=66.59 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=48.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEE-EEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+.|.|.+++..|+|.|+|.|.|..|..... +.|... .+|.+...+. ...+..+.|.|.+.+.++...+.|
T Consensus 67 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W 141 (195)
T 2c5d_C 67 VSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE-GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLW 141 (195)
T ss_dssp EEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEE
T ss_pred ccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEe-cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEE
Confidence 5789999999999999999999998876543 444331 1223322211 124678999999987765534553
No 78
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.74 E-value=7e-08 Score=66.66 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccC-CCceeecCCC---CCCCCeEEEEEEeC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKP-NPAIFRSHPQ---GRLPNSYNITWMVS 78 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P-~p~~~~~~~~---~~~~~~~~L~w~~~ 78 (123)
.+|+.+...+....|.|.+++.+|+|.|+|.|.|..|... ..+.|...+ .+|.+..... ...+..+.|.|.+.
T Consensus 61 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 140 (212)
T 1q0x_L 61 PARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTIT 140 (212)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred cccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEE
Confidence 4788887666778999999999999999999999887432 234443322 3444332111 11356899999987
Q ss_pred CCCC
Q psy17207 79 SYTP 82 (123)
Q Consensus 79 s~~p 82 (123)
+.+|
T Consensus 141 g~~p 144 (212)
T 1q0x_L 141 DFYP 144 (212)
T ss_dssp EEBS
T ss_pred EEeC
Confidence 6544
No 79
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.73 E-value=5.8e-08 Score=60.92 Aligned_cols=39 Identities=28% Similarity=0.493 Sum_probs=34.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 46 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 84 (108)
T 2dm7_A 46 TLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQE 84 (108)
T ss_dssp BCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETTE
T ss_pred ECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcCC
Confidence 456778999988888889999999999999999999663
No 80
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.73 E-value=3.5e-08 Score=66.41 Aligned_cols=82 Identities=15% Similarity=0.236 Sum_probs=52.4
Q ss_pred ccCCCEEEEEcCC--EEEEEEcccCCCCCeeEEEEEEcCCceeE-E--EEEEeccCCCceeecCCC---CCCCCeEEEEE
Q psy17207 4 ETTERRIMETRGS--RHTLMIRKVVASDFGNYSCEATNPMGKHR-A--YLELSGKPNPAIFRSHPQ---GRLPNSYNITW 75 (123)
Q Consensus 4 ~~d~R~~i~~~~~--~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~--~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w 75 (123)
..+.++.+...+. .+.|.|.+++..|+|.|+|.|.|..|... . .+.|..+| .+...+. ...+..+.|.|
T Consensus 44 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p---~~~~~~~~~~~~~g~~~~l~C 120 (182)
T 1rhf_A 44 QNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVP---FFTVEPKDLAVPPNAPFQLSC 120 (182)
T ss_dssp CSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSC---EEEECCCCEEECTTCCEEEEE
T ss_pred CCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCC---eEEecCcceEecCCCEEEEEe
Confidence 3344454433222 46899999999999999999999988644 2 34444433 2222111 12467899999
Q ss_pred EeCCCCCCcceEE
Q psy17207 76 MVSSYTPLEEFKI 88 (123)
Q Consensus 76 ~~~s~~pi~~y~v 88 (123)
.+.+.++...|.|
T Consensus 121 ~~~g~p~p~~v~W 133 (182)
T 1rhf_A 121 EAVGPPEPVTIVW 133 (182)
T ss_dssp EEECSSSCCEEEE
T ss_pred EecCCCCCCEEEE
Confidence 9987765445554
No 81
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.73 E-value=2.1e-08 Score=61.66 Aligned_cols=47 Identities=19% Similarity=0.321 Sum_probs=39.2
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
|..+.|+.+. .+.|.|.+++.+|+|.|+|.|.|..|.....+.|...
T Consensus 40 ~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 86 (95)
T 4hwu_A 40 LGPNNRTVLI----GEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVT 86 (95)
T ss_dssp ECCCSSEEEE----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCCceEEEe----CCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEe
Confidence 4556777764 2489999999999999999999999999888877753
No 82
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.72 E-value=1.4e-07 Score=67.50 Aligned_cols=86 Identities=13% Similarity=0.153 Sum_probs=55.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-------eeE----EEEEEeccCC------------Cceee
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-------KHR----AYLELSGKPN------------PAIFR 60 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~----~~i~l~~~P~------------p~~~~ 60 (123)
++|+.+..+ +...+|+|.+++.+|+|.|+|.|.|..| ... ..+.|...|. ++.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 143 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLT 143 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEE
Confidence 578988753 5678999999999999999999999965 111 2344443321 11111
Q ss_pred cCC---CCCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 61 SHP---QGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 61 ~~~---~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
..+ ....+..+.|.|.+.+.++. ...|||..
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~ 177 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINN--YLAWYQQK 177 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBT--CEEEEEEC
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCC--cEEEEEEC
Confidence 111 12257889999998776543 35567754
No 83
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.72 E-value=1.4e-07 Score=67.15 Aligned_cols=89 Identities=15% Similarity=0.132 Sum_probs=56.8
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE-----EEEEEeccCC------------------Cceeec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-----AYLELSGKPN------------------PAIFRS 61 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-----~~i~l~~~P~------------------p~~~~~ 61 (123)
.++|+.+...+....|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.|. ++.+..
T Consensus 61 ~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T 3ux9_B 61 VPDRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE 140 (256)
T ss_dssp CCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE
T ss_pred cCCcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc
Confidence 35799887777788999999999999999999999765322 2344444331 111111
Q ss_pred CC--CCCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 62 HP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 62 ~~--~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
.. ....+..+.|.|.+.+.++......|||..
T Consensus 141 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 174 (256)
T 3ux9_B 141 SGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQA 174 (256)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred CCCeEEcCCCeEEEEEEEeCCcccccEEEEEEEC
Confidence 11 112578899999997655323345567764
No 84
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.72 E-value=4.7e-08 Score=67.51 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=55.6
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce--eEE--EEEEeccC-CCceeecCCCC---CCCCeEEEEEE
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK--HRA--YLELSGKP-NPAIFRSHPQG---RLPNSYNITWM 76 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--~~~--~i~l~~~P-~p~~~~~~~~~---~~~~~~~L~w~ 76 (123)
..+|+.+...+....|.|.+++.+|+|.|+|.|.|..|. ... .+.|...+ .+|.+...+.. ..+..+.|.|.
T Consensus 55 ~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~ 134 (211)
T 3tv3_L 55 VPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCL 134 (211)
T ss_dssp SCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEE
T ss_pred CcCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEE
Confidence 347898876677889999999999999999999999883 222 34444322 34444322211 13678999999
Q ss_pred eCCC-CCCcceE
Q psy17207 77 VSSY-TPLEEFK 87 (123)
Q Consensus 77 ~~s~-~pi~~y~ 87 (123)
+.+. +|...+.
T Consensus 135 ~~g~~p~~~~v~ 146 (211)
T 3tv3_L 135 ISDFYPGAVTVA 146 (211)
T ss_dssp EEEEBSSCCEEE
T ss_pred eeeecCCCeEEE
Confidence 8764 3344444
No 85
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.71 E-value=4.4e-08 Score=66.15 Aligned_cols=47 Identities=26% Similarity=0.446 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCEEEEEEcccC-CCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGSRHTLMIRKVV-ASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
++|+.+...+....|.|.+++ ..|+|.|+|.|.|.+|.....+.|..
T Consensus 134 ~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 134 ESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp GGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEE
Confidence 478988887888899999999 99999999999999999999877764
No 86
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.71 E-value=5.6e-08 Score=69.06 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeec-CCC--CCCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s 79 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..+.... .+.|...+.+|.+.. .+. ...+..+.|.|.+.+
T Consensus 101 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g 180 (254)
T 2c1o_A 101 PDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 180 (254)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred cceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEec
Confidence 37898877777889999999999999999999998664332 344544333444332 111 113458999999876
Q ss_pred CCC
Q psy17207 80 YTP 82 (123)
Q Consensus 80 ~~p 82 (123)
.+|
T Consensus 181 ~~p 183 (254)
T 2c1o_A 181 FYP 183 (254)
T ss_dssp EBS
T ss_pred ccC
Confidence 433
No 87
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.71 E-value=3.9e-08 Score=67.48 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=47.2
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCce----eEEEEEEeccCCCceeecCCC--CCCCCeEEEEEEeCCC
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGK----HRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSY 80 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~~~~i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~ 80 (123)
.....|.|.+++.+|+|.|+|.|.|..|. ....+.|.+.+.+|.+...+. ...+..+.|.|.+.+.
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~ 126 (196)
T 3p2t_A 55 KNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSP 126 (196)
T ss_dssp SSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEE
T ss_pred CceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCC
Confidence 45689999999999999999999999983 223455555554555442221 2357889999998663
No 88
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.71 E-value=4.5e-08 Score=65.57 Aligned_cols=51 Identities=22% Similarity=0.358 Sum_probs=41.8
Q ss_pred ccccCCCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+... ...+.|.|.+++..|+|.|+|.|.|.+|.....+.|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 81 PVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 132 (154)
T ss_dssp ECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEE
Confidence 3556678877643 33579999999999999999999999999998777664
No 89
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.70 E-value=8.8e-08 Score=68.88 Aligned_cols=88 Identities=10% Similarity=0.098 Sum_probs=56.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce---eE--EEEEEeccCCCceeecC--CCCCCCCeEEEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK---HR--AYLELSGKPNPAIFRSH--PQGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~--~~i~l~~~P~p~~~~~~--~~~~~~~~~~L~w~ 76 (123)
++|+.+... +....|+|.+++.+|+|.|+|.|.|..|. .. ..+.|...+.+...... .....+..+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~ 144 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCR 144 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeE
Confidence 478988753 45789999999999999999999999773 11 12344433322211111 01135788999999
Q ss_pred eCCCCCCc---ceEEEeEEc
Q psy17207 77 VSSYTPLE---EFKIKYRKI 93 (123)
Q Consensus 77 ~~s~~pi~---~y~v~yr~~ 93 (123)
+.+.++.. -...|||..
T Consensus 145 ~~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 145 SSQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp ESSCCBCTTSCBCEEEEEEC
T ss_pred ecCcccccccceEEEEEEEC
Confidence 98765531 134467753
No 90
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.70 E-value=5.7e-08 Score=60.36 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=38.2
Q ss_pred cCCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.++|+.+.. ......|.|.+++.+|+|.|+|.|.| .|.....+.|..
T Consensus 57 ~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V 104 (108)
T 3m45_A 57 RDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTV 104 (108)
T ss_dssp CCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEE
T ss_pred ccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEE
Confidence 456888653 33578999999999999999999999 898888776654
No 91
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.70 E-value=5.7e-08 Score=71.42 Aligned_cols=73 Identities=15% Similarity=0.291 Sum_probs=51.8
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCcee-------EEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCC-cc
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKH-------RAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPL-EE 85 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-------~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi-~~ 85 (123)
.....|.|.+++.+|+|.|+|.|.|..|.. ...+.|...|.+|.+.... ....+..+.|.|.+.+.+|. ..
T Consensus 71 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~ 150 (327)
T 2wng_A 71 NMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 150 (327)
T ss_dssp CCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCE
T ss_pred CceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcE
Confidence 345689999999999999999999997752 2355666677776655321 12357889999998876543 24
Q ss_pred eE
Q psy17207 86 FK 87 (123)
Q Consensus 86 y~ 87 (123)
+.
T Consensus 151 v~ 152 (327)
T 2wng_A 151 LK 152 (327)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 92
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.69 E-value=5.2e-08 Score=71.83 Aligned_cols=76 Identities=13% Similarity=-0.017 Sum_probs=54.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE--eccCCCceeecCCCCCCCCeEEEEEEeCC--CCCCcceEEEeEEc
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSS--YTPLEEFKIKYRKI 93 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l--~~~P~p~~~~~~~~~~~~~~~~L~w~~~s--~~pi~~y~v~yr~~ 93 (123)
+.|+|.+++..|+|.|+|+|.|..+.....+.| ..+|.+|....-........+.+.|.++. +.+ ..|+|+|+..
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~-~~Y~l~~~~~ 139 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLP-TSFTLKSFKS 139 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESSSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEEC
T ss_pred EEEEEeccCCCccceEEeeecCCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCc-eeEEEEEEec
Confidence 789999999999999999998877765554444 45777776443111113578999999753 344 4699999876
Q ss_pred C
Q psy17207 94 P 94 (123)
Q Consensus 94 ~ 94 (123)
.
T Consensus 140 ~ 140 (313)
T 2d9q_B 140 R 140 (313)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.69 E-value=2.2e-08 Score=62.59 Aligned_cols=48 Identities=23% Similarity=0.335 Sum_probs=34.5
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+..+.++.+.. ..+.|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 51 ~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 51 LVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp CCCBTTEEEET--TTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEE
T ss_pred cccCCCeEEeC--CCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEE
Confidence 44456665542 3468999999999999999999999999998876654
No 94
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.69 E-value=8.4e-08 Score=65.18 Aligned_cols=48 Identities=25% Similarity=0.369 Sum_probs=42.8
Q ss_pred cCCCEEEEEcCCEEEEEEcccC-CCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVV-ASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.++|+.+...+..+.|.|.+++ .+|+|.|+|.|.|.+|....++.|..
T Consensus 140 ~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 188 (190)
T 2wv3_A 140 SSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188 (190)
T ss_dssp TTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEE
Confidence 5689988887778899999999 79999999999999999999877753
No 95
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.69 E-value=1.1e-07 Score=63.06 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=39.9
Q ss_pred CCCEEEEEcC------CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--c-cCCCcee
Q psy17207 6 TERRIMETRG------SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--G-KPNPAIF 59 (123)
Q Consensus 6 d~R~~i~~~~------~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~-~P~p~~~ 59 (123)
..|+.+.... ....|.|+++...|+|.|+|+|.|..|..+.++.|. + +|..|.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~ 119 (126)
T 2dav_A 57 GKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNI 119 (126)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEECCCCSCCCC
T ss_pred CceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEecCCCCCeE
Confidence 4566664211 257899999999999999999999999998866554 4 4444443
No 96
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.69 E-value=3.6e-08 Score=67.05 Aligned_cols=51 Identities=22% Similarity=0.219 Sum_probs=44.6
Q ss_pred ccccCCCEEEEEcCCEEEEEEcc-cCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+...+..+.|.|.+ +..+|+|.|+|.|.|.+|....++.|..
T Consensus 144 ~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 144 LIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp EECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEE
Confidence 45667888887777789999999 9999999999999999999998887754
No 97
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.69 E-value=4.9e-08 Score=67.00 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=43.6
Q ss_pred ccccCCCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+... +....|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 157 ALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp EECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 4566788887654 66789999999999999999999999999999887765
No 98
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.69 E-value=2.5e-07 Score=65.41 Aligned_cols=86 Identities=12% Similarity=0.077 Sum_probs=56.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeEE----EEEEeccC------------CCceeecCCC---
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA----YLELSGKP------------NPAIFRSHPQ--- 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~----~i~l~~~P------------~p~~~~~~~~--- 64 (123)
++|+.+..+ +...+|+|.+++.+|+|.|+|.|.|..+.... .+.|...| .++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLS 146 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEE
Confidence 478888653 45778999999999999999999998443322 34444332 1222221111
Q ss_pred CCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 65 GRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 65 ~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
...+..+.|.|.+.+.++. . ..|||..
T Consensus 147 v~~G~~v~L~C~~~~~~~~-~-v~W~k~~ 173 (247)
T 2ghw_B 147 LSPGERATLSCRASQSVRS-N-LAWYQQK 173 (247)
T ss_dssp ECTTSCEEEEEEESSCCTT-C-EEEEEEC
T ss_pred ecCCCcEEEEEEeCCCccc-e-EEEEEEC
Confidence 1257889999999876654 3 4467754
No 99
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.69 E-value=3.6e-07 Score=63.24 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=52.3
Q ss_pred CCEEEEEEccc-CCCCCeeEEEEEEcCCceeEEEEEEec--c----CCCceeecCCCC---CCCCeEEEEEEeCCCCCCc
Q psy17207 15 GSRHTLMIRKV-VASDFGNYSCEATNPMGKHRAYLELSG--K----PNPAIFRSHPQG---RLPNSYNITWMVSSYTPLE 84 (123)
Q Consensus 15 ~~~~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~~i~l~~--~----P~p~~~~~~~~~---~~~~~~~L~w~~~s~~pi~ 84 (123)
+....|.|.++ ...|+|.|+|.|.|..|.....+.|.. . |.+|.+...+.. ..+..+.|.|.+.+.++.
T Consensus 60 ~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p- 138 (212)
T 2yd6_A 60 GSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP- 138 (212)
T ss_dssp GTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC-
T ss_pred CCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC-
Confidence 45678999999 499999999999999999887766553 2 223444332221 146789999999877655
Q ss_pred ceEEEeE
Q psy17207 85 EFKIKYR 91 (123)
Q Consensus 85 ~y~v~yr 91 (123)
.+. ||+
T Consensus 139 ~v~-W~~ 144 (212)
T 2yd6_A 139 EIT-WFK 144 (212)
T ss_dssp EEE-EEE
T ss_pred eEE-EEE
Confidence 344 444
No 100
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.69 E-value=1.7e-07 Score=67.76 Aligned_cols=89 Identities=20% Similarity=0.166 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCC----------------Cc-eeecCC--
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN----------------PA-IFRSHP-- 63 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~----------------p~-~~~~~~-- 63 (123)
++|+.+...+....|+|.+++.+|+|.|.|.|.|..+... ..+.|...|. |. .+...+
T Consensus 69 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 2gjj_A 69 PDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 148 (264)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCE
T ss_pred CccEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCE
Confidence 5799887666678999999999999999999999865321 2344544331 11 111111
Q ss_pred CCCCCCeEEEEEEeCCCCCCcceEEEeEEcC
Q psy17207 64 QGRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (123)
Q Consensus 64 ~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~~ 94 (123)
....+..+.|.|.+.+.++......|||...
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~ 179 (264)
T 2gjj_A 149 VVKTGASVKISCKASGYSFTGYFINWVKKNS 179 (264)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECT
T ss_pred EEcCCCcEEEEEEEeCCccCCeEEEEEEECC
Confidence 1225788999999876654223466787753
No 101
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.68 E-value=9.8e-08 Score=65.77 Aligned_cols=75 Identities=11% Similarity=0.023 Sum_probs=51.2
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee------EEEEEEeccCCCceeecCCCCCCCCeEEEEEEe
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSGKPNPAIFRSHPQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~ 77 (123)
.+|+.+..+ ....+|.|.+++.+|+|.|+|.+.|..|.. ...+.|...|.+|.+........+..+.|.|.+
T Consensus 68 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~ 147 (214)
T 2zg1_A 68 QGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSL 147 (214)
T ss_dssp TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEEC
T ss_pred cCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEe
Confidence 478877532 235589999999999999999999986432 234555565555554432222357889999998
Q ss_pred CCC
Q psy17207 78 SSY 80 (123)
Q Consensus 78 ~s~ 80 (123)
.+.
T Consensus 148 ~~~ 150 (214)
T 2zg1_A 148 PGS 150 (214)
T ss_dssp TTC
T ss_pred ccC
Confidence 654
No 102
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.68 E-value=1.7e-08 Score=71.02 Aligned_cols=49 Identities=22% Similarity=0.357 Sum_probs=39.5
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
|..++|+.. ......|.|.+++.+|+|.|+|+|.|.+|.+..++.|.+.
T Consensus 158 l~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 158 ISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp ECCCCCCCC--SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCCceEc--CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 444556533 2335679999999999999999999999999999998763
No 103
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.68 E-value=1.2e-07 Score=65.15 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=47.6
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeE----EEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.+.+|.+...+ ....+..+.|.|.+.+.+| .|.
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~--~~~- 131 (196)
T 2d3v_A 55 KNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFD--RFI- 131 (196)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCCS--EEE-
T ss_pred ccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCC--EEE-
Confidence 4567899999999999999999999988543 345555544445444322 1235788999999987763 344
Q ss_pred EeEE
Q psy17207 89 KYRK 92 (123)
Q Consensus 89 ~yr~ 92 (123)
||+.
T Consensus 132 W~k~ 135 (196)
T 2d3v_A 132 LTEE 135 (196)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 4443
No 104
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.68 E-value=5e-08 Score=66.08 Aligned_cols=51 Identities=25% Similarity=0.374 Sum_probs=44.5
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+...+....|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 143 EIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 355678888887787889999999999999999999999999998887753
No 105
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.67 E-value=9.2e-09 Score=66.20 Aligned_cols=48 Identities=29% Similarity=0.491 Sum_probs=39.9
Q ss_pred CCCEEEE--EcCC--EEEEEEcccCCCCC-eeEEEEEEcCCceeEEEEEEecc
Q psy17207 6 TERRIME--TRGS--RHTLMIRKVVASDF-GNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 6 d~R~~i~--~~~~--~~~L~I~~v~~~D~-G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
+.||.+. .... .+.|.|.+++..|+ |.|+|.|.|.+|.+...+.|...
T Consensus 60 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 60 SGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred CCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEEC
Confidence 5788773 2222 66899999999999 99999999999999999888763
No 106
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.67 E-value=9e-08 Score=59.39 Aligned_cols=47 Identities=23% Similarity=0.388 Sum_probs=38.6
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.| |....++.|..
T Consensus 47 ~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V 93 (100)
T 2yuv_A 47 EIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFV 93 (100)
T ss_dssp BCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEE
T ss_pred ECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEE
Confidence 466678999988888889999999999999999999 56666555543
No 107
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.67 E-value=3.6e-08 Score=62.25 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=33.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|.|.+++.+|+|.|+|.|.|..|.+.+++.|.+
T Consensus 71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEE
Confidence 568999999999999999999999999999887764
No 108
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.67 E-value=8.3e-08 Score=66.40 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=50.5
Q ss_pred CCEEEEEc---CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCCCCCCCeEEEEEEeCCCC
Q psy17207 7 ERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVSSYT 81 (123)
Q Consensus 7 ~R~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~s~~ 81 (123)
+|+.+... .....|.|.+++.+|+|.|+|.|.| .|.....+.|.. +|..+..........+..+.|.|.+.+++
T Consensus 66 ~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P 144 (222)
T 3sbw_C 66 QRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYP 144 (222)
T ss_dssp SSEEECHHHHTTTEEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBS
T ss_pred CceEEccccccCCEEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCC
Confidence 56665422 2457899999999999999999999 677666665543 34333322211122467899999997754
Q ss_pred C
Q psy17207 82 P 82 (123)
Q Consensus 82 p 82 (123)
+
T Consensus 145 ~ 145 (222)
T 3sbw_C 145 K 145 (222)
T ss_dssp C
T ss_pred C
Confidence 4
No 109
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.66 E-value=2.7e-07 Score=63.13 Aligned_cols=78 Identities=13% Similarity=0.245 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC-ceeEEEEEEe--ccCCCceeecCC-CCCCCCeEEEEEEeCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLELS--GKPNPAIFRSHP-QGRLPNSYNITWMVSSYT 81 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~i~l~--~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~ 81 (123)
++|+.+..+ +.|.|.+++..|+|.|+|.+.|.. |.....+.|. ..+..|.+.... ....+..+.|.|.+.+.+
T Consensus 62 ~~r~~~~~~---~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~p 138 (208)
T 3r4d_A 62 SGREIIYSN---GSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIG 138 (208)
T ss_dssp CSSEEECTT---SCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTT
T ss_pred cceeEEecC---CeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCC
Confidence 456666532 479999999999999999999995 5555555544 344444444322 233578899999998865
Q ss_pred CCcceEE
Q psy17207 82 PLEEFKI 88 (123)
Q Consensus 82 pi~~y~v 88 (123)
| .|.|
T Consensus 139 p--~i~W 143 (208)
T 3r4d_A 139 A--NIQW 143 (208)
T ss_dssp C--EEEE
T ss_pred C--ceEE
Confidence 4 4554
No 110
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.66 E-value=1e-07 Score=65.02 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=50.4
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcce
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEF 86 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y 86 (123)
+|+.+. ...++|+|.+++.+|+|.|+|.|.|..|.....+.|..++..|.+..... . ..|.|.+.+.++. .|
T Consensus 51 ~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~n~~~~~~~~L~V~~~~~~p~i~~~~~---~--~~L~C~~~~~p~p-~i 122 (171)
T 1ccz_A 51 NRVYLD--TVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWECS---N--ATLTCEVLEGTDV-EL 122 (171)
T ss_dssp TSEEEC--TTTCCEEECSCCGGGCEEEEEECTTCCSCEEEEEEEECCCCCCEEEEETT---T--TEEEEECSSCSSC-EE
T ss_pred CcEEEe--CCCCeEEECCCChhhCceEEEEEeCCCCcEEEEEEEECcCCCCEEEEecC---C--cEEEEEeCCCCCc-EE
Confidence 466553 23468999999999999999999999996555666666555454432111 1 2789998776443 45
Q ss_pred EE
Q psy17207 87 KI 88 (123)
Q Consensus 87 ~v 88 (123)
.|
T Consensus 123 ~W 124 (171)
T 1ccz_A 123 KL 124 (171)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 111
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.65 E-value=1.1e-07 Score=68.97 Aligned_cols=88 Identities=17% Similarity=0.187 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCC-----------CceeecC---CCCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN-----------PAIFRSH---PQGRLP 68 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~-----------p~~~~~~---~~~~~~ 68 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|..|... ..+.|...|. |+..... .....+
T Consensus 70 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G 149 (276)
T 3auv_A 70 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPG 149 (276)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTT
T ss_pred CCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCC
Confidence 5799887767778999999999999999999999865421 2333433321 1111111 111257
Q ss_pred CeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 69 NSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 69 ~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
..+.|.|.+.+.+|......|||..
T Consensus 150 ~~v~L~C~~~g~~~~~~~v~W~k~~ 174 (276)
T 3auv_A 150 GSLRLSCAASGFTISDYWIHWVRQA 174 (276)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred CeEEEEEEecCccCCCCEEEEEEcC
Confidence 8899999997765433345567764
No 112
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.65 E-value=8.2e-08 Score=69.57 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=44.0
Q ss_pred ccccCCCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+... +....|.|.+++..|+|.|+|.|.|.+|....++.|..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 262 ALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp EECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 4566788888654 66789999999999999999999999999999887765
No 113
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=64.30 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=49.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE----EEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCCCcceEEEe
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKY 90 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~pi~~y~v~y 90 (123)
...|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.+.+|.+...+ ....+..+.|.|.+.+.++ .|. ||
T Consensus 51 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~--~~~-w~ 127 (184)
T 2gi7_A 51 QAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFD--QFA-LY 127 (184)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCC--EEE-EE
T ss_pred ccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCc--EEE-EE
Confidence 46899999999999999999999887432 345554444444443221 2235789999999765543 454 45
Q ss_pred EE
Q psy17207 91 RK 92 (123)
Q Consensus 91 r~ 92 (123)
+.
T Consensus 128 k~ 129 (184)
T 2gi7_A 128 KE 129 (184)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 114
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.64 E-value=9.3e-08 Score=72.29 Aligned_cols=63 Identities=16% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~p 82 (123)
.|+.+ .. ++|.|.+++.+|+|.|+|+|.|..|.+...+.|.+.+.+ ..+..+.|.|.+.+.|+
T Consensus 294 ~r~~~-~~---~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~---------~~g~~~~l~C~~~g~P~ 356 (361)
T 2xot_A 294 GSVSV-RN---GDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFT---------LHGHHDTLNAAADPWSH 356 (361)
T ss_dssp SSEEE-ET---TEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEESSC---------CC---------------
T ss_pred CceEe-ec---CeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEeee---------ccCCceEEEEEeCCCCC
Confidence 47777 33 479999999999999999999999999998888764322 23456788999877654
No 115
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.64 E-value=9e-08 Score=63.40 Aligned_cols=51 Identities=20% Similarity=0.288 Sum_probs=39.0
Q ss_pred CCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCc
Q psy17207 6 TERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPA 57 (123)
Q Consensus 6 d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~ 57 (123)
++|+.+. ......+|.|.+++.+|+|.|+|.|.|. |.....+.|. .+|.+|
T Consensus 90 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 90 DNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEEECCCC--
T ss_pred cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEEEeCCCCC
Confidence 5788764 3345679999999999999999999999 8888776655 455554
No 116
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.64 E-value=2.6e-08 Score=70.13 Aligned_cols=44 Identities=11% Similarity=0.033 Sum_probs=36.1
Q ss_pred ccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEE
Q psy17207 4 ETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (123)
Q Consensus 4 ~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (123)
..+.|+.+..+|....|.|.+++.+|+|.|+|+|+|.+|++++.
T Consensus 152 ~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 152 AANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp ----CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred cccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 34578888777877888899999999999999999999999875
No 117
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=7.2e-08 Score=61.48 Aligned_cols=45 Identities=27% Similarity=0.341 Sum_probs=37.4
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|+.+...+ .|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 52 ~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (118)
T 2eo9_A 52 QDSRIKQLENG---VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEV 96 (118)
T ss_dssp TSTTEEEEETT---EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEE
T ss_pred CCCeEEEccCC---EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEE
Confidence 35788776544 8999999999999999999999999887655543
No 118
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.64 E-value=2.3e-07 Score=63.00 Aligned_cols=72 Identities=18% Similarity=0.135 Sum_probs=50.2
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCCCCCCcceEEEeE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s~~pi~~y~v~yr 91 (123)
..+.|.|.+++.+|+|.|+|.|.|. |.....+.|...-. |.+...+ ....+..+.|.|.+.+.++. .+. ||+
T Consensus 54 ~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~i~-W~~ 128 (190)
T 2wv3_A 54 SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAA-PDITGHKRSENKNEGQDAMMYCKSVGYPHP-EWM-WRK 128 (190)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECC-CEEEEECSEEEEETTSCEEEEEEEECSSCC-EEE-EEE
T ss_pred ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecC-CcccccCCcceeeCCCcEEEEEEeCccCCC-ceE-EEE
Confidence 3578999999999999999999999 88887766654222 2222111 11256789999999877654 444 444
No 119
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.63 E-value=2.5e-07 Score=67.26 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=54.9
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCc---eeE----EEEEEeccC------------CCceeecCC-
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG---KHR----AYLELSGKP------------NPAIFRSHP- 63 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~~~----~~i~l~~~P------------~p~~~~~~~- 63 (123)
++|+.+.. .+...+|+|.+++.+|+|.|.|.|.|..| ... ..+.|...| .++.+...+
T Consensus 91 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~ 170 (282)
T 1qok_A 91 QGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPA 170 (282)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECS
T ss_pred cCcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCC
Confidence 47888865 34568999999999999999999999987 211 234454433 122222111
Q ss_pred --CCCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 64 --QGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 64 --~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
....+..+.|.|.+.+.+| ...|||..
T Consensus 171 ~~~v~~G~~v~L~C~~~~~~~---~v~W~k~~ 199 (282)
T 1qok_A 171 IMSASPGEKVTITCSASSSVS---YMHWFQQK 199 (282)
T ss_dssp EEEECTTCCEEEEEEESSCCS---CCEEEEEC
T ss_pred EEEEcCCCcEEEEEEecCCCc---eEEEEEEC
Confidence 1225788999999876652 34467754
No 120
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.63 E-value=2.6e-07 Score=63.44 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=46.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCC-cee----EEEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPM-GKH----RAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~-G~~----~~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~p 82 (123)
...|.|.+++.+|+|.|+|.|.|.. |.. ...+.|.+.+.+|.+...+ ....+..+.|.|.+.+.+|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~ 129 (198)
T 1ugn_A 57 KGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFD 129 (198)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCS
T ss_pred ccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCc
Confidence 4689999999999999999999988 632 2345555544444443221 1125788999999987733
No 121
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=2.6e-08 Score=61.63 Aligned_cols=45 Identities=29% Similarity=0.404 Sum_probs=36.3
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|+.+.. .+.|.|.+++.+|+|.|+|.|.|..|.....+.|..
T Consensus 52 ~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2edj_A 52 RDPRATIQE---QGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDV 96 (100)
T ss_dssp SCSSCEECT---TCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEE
T ss_pred CCCCEEEcC---CCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEE
Confidence 345666543 347999999999999999999999999887766654
No 122
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.62 E-value=2.2e-07 Score=66.39 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE--eccCCCceeecCCCCCCCCeEEEEEEeCCCCCCc
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLE 84 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l--~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~ 84 (123)
.....|.|.+++.+|.|.|.|+|.|..|.....+.| ...|..+.+... .......+ |.|.+.+..|..
T Consensus 56 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~ 125 (210)
T 1gsm_A 56 TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVD 125 (210)
T ss_dssp SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCC
T ss_pred CCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCC
Confidence 456789999999999999999999999998776555 456655443322 22345667 999998766643
No 123
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=58.50 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=32.3
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~ 51 (123)
..+.|.|.+++.+|+|.|+|.|.|.+|....++.|.
T Consensus 62 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 97 (99)
T 2yr3_A 62 GVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97 (99)
T ss_dssp TEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEE
T ss_pred CeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 467899999999999999999999999998876654
No 124
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=58.28 Aligned_cols=45 Identities=31% Similarity=0.572 Sum_probs=36.4
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l 50 (123)
+|..++||.+...+....|.|.+++..|+|.|+|.| |....++.|
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l 91 (95)
T 2k1m_A 47 DISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDL 91 (95)
T ss_dssp EECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEE
T ss_pred ECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEE
Confidence 456678999988888889999999999999999999 445444444
No 125
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.62 E-value=2.2e-07 Score=63.59 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=47.5
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEec--cCCCceeecCCCCCCCCeEEEEEEeC-CCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVS-SYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~-s~~pi~~y~v 88 (123)
...|.|.+++.+|+|.|+|.|.|..|.. ...+.|.. .+..|.+... ....+..+.|.|.+. ++++. .+.
T Consensus 64 ~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~-~~~~g~~~~l~C~~~~g~P~p-~i~- 140 (201)
T 1dr9_A 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF-EIPTSNIRRIICSTSGGFPEP-HLS- 140 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE-ECSSTTEEEEEEEEEEESSCE-EEE-
T ss_pred CcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEec-cCCCCCeEEEEEecCCccCCC-EEE-
Confidence 4689999999999999999999988754 23455543 3333333321 112367889999985 65544 344
Q ss_pred EeE
Q psy17207 89 KYR 91 (123)
Q Consensus 89 ~yr 91 (123)
||+
T Consensus 141 W~k 143 (201)
T 1dr9_A 141 WLE 143 (201)
T ss_dssp EEE
T ss_pred EEE
Confidence 344
No 126
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.61 E-value=2.6e-07 Score=65.90 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=54.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC----CceeEE--EEEEeccC-------------CCceeecCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP----MGKHRA--YLELSGKP-------------NPAIFRSHPQ 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~----~G~~~~--~i~l~~~P-------------~p~~~~~~~~ 64 (123)
++|+.+..+ .....|.|.+++.+|+|.|+|.|.|. .+.... .+.|...+ .++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~ 146 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS 146 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC
Confidence 478887643 44678999999999999999999998 222222 23333210 1222222111
Q ss_pred ---CCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 65 ---GRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 65 ---~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
...+..+.|.|.+.+.++. ...|||..
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~ 176 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDIGS--NLNWLQQK 176 (256)
T ss_dssp EEEECTTCCEEEEEEESSCCTT--CEEEEEEC
T ss_pred eEEEECCCCEEEEEEEecCCCc--EEEEEEEC
Confidence 1257889999999875543 45577764
No 127
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.61 E-value=1.1e-07 Score=65.61 Aligned_cols=83 Identities=19% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC-CceeE----EEEEEeccC-CCceeecCCC---CCCCCeEEEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP-MGKHR----AYLELSGKP-NPAIFRSHPQ---GRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~-~G~~~----~~i~l~~~P-~p~~~~~~~~---~~~~~~~~L~w~ 76 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|. .+... ..+.|...+ .+|.+..... ...+..+.|.|.
T Consensus 57 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~ 136 (212)
T 1nfd_E 57 PERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCL 136 (212)
T ss_dssp CTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEE
T ss_pred cccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEE
Confidence 57998876677889999999999999999999973 22211 234443332 3444432111 113568999999
Q ss_pred eCCCCCC-cceEE
Q psy17207 77 VSSYTPL-EEFKI 88 (123)
Q Consensus 77 ~~s~~pi-~~y~v 88 (123)
+.+..|. ..+.|
T Consensus 137 ~~g~~p~~~~v~W 149 (212)
T 1nfd_E 137 VNDFYPGSATVTW 149 (212)
T ss_dssp EEEEBSSCCEEEE
T ss_pred EEeeECCccEEEE
Confidence 8766332 34443
No 128
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.61 E-value=2e-07 Score=73.38 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=58.3
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSSY 80 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s~ 80 (123)
++|+.+.. .+....|.|.+++.+|+|.|+|.|.|..|.....+.|.....| .+...+ ....+..+.|.|.+.+.
T Consensus 61 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p-~~~~~~~~~~v~~G~~v~l~C~~~~~ 139 (585)
T 2ocw_A 61 AGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP-GLLNDTKVYTVDLGRTVTINCPFKTE 139 (585)
T ss_pred eceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCc-cccCCCccEEEEcCCCEEEEEEecCC
Confidence 46887764 3445689999999999999999999999988877766643222 222111 11257889999999866
Q ss_pred CCCcceEEEeEE
Q psy17207 81 TPLEEFKIKYRK 92 (123)
Q Consensus 81 ~pi~~y~v~yr~ 92 (123)
+|...+. ||+.
T Consensus 140 ~~~~~v~-W~k~ 150 (585)
T 2ocw_A 140 NAQKRKS-LYKQ 150 (585)
T ss_pred CCCccEE-EEEC
Confidence 5544443 5554
No 129
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.61 E-value=2.8e-07 Score=64.66 Aligned_cols=86 Identities=10% Similarity=0.111 Sum_probs=51.2
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeE-------EEEEEeccCC---C------ceeecCC---CC
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-------AYLELSGKPN---P------AIFRSHP---QG 65 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-------~~i~l~~~P~---p------~~~~~~~---~~ 65 (123)
++|+.+.. .+....|+|.+++.+|+|.|+|.|.|..|... ..+.|...+. | +.+...+ ..
T Consensus 60 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v 139 (238)
T 2p1y_A 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV 139 (238)
T ss_dssp CTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEE
T ss_pred cceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEE
Confidence 46888764 33466899999999999999999999876321 1344433221 0 0111111 11
Q ss_pred CCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 66 RLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 66 ~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
..+..+.|.|.+.+.++. ...|||..
T Consensus 140 ~~G~~v~L~C~~~~~p~~--~i~W~k~~ 165 (238)
T 2p1y_A 140 WEGETAILNCSYENSAFD--YFPWYQQF 165 (238)
T ss_dssp ETTSCEEEEEECCCTTCC--EEEEEEEC
T ss_pred eCCCeEEEEEEEecCCCC--cEEEEEEC
Confidence 257889999998766542 35567764
No 130
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.61 E-value=6.2e-08 Score=61.95 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..+.|.|.+++.+|+|.|+|.|.|..|....++.|..
T Consensus 72 ~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V 108 (122)
T 3s35_X 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 108 (122)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEECCCCcccCEEEEEEEccCCCceEEEEEEEE
Confidence 3568999999999999999999999999998776654
No 131
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.61 E-value=3.2e-07 Score=65.43 Aligned_cols=87 Identities=11% Similarity=0.121 Sum_probs=53.7
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC------------CceeEE--EEEEeccCC------------Cc
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP------------MGKHRA--YLELSGKPN------------PA 57 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~------------~G~~~~--~i~l~~~P~------------p~ 57 (123)
.+|+.+.. .+....|+|.+++.+|+|.|.|.|.|. .+.... .+.|...+. ++
T Consensus 71 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 150 (256)
T 3juy_B 71 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEI 150 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCC
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCccee
Confidence 36998873 355778999999999999999999997 222222 233333221 12
Q ss_pred eeecCCC---CCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 58 IFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 58 ~~~~~~~---~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
.+...+. ...+..+.|.|.+.+.++... .-|||..
T Consensus 151 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~-v~W~k~~ 188 (256)
T 3juy_B 151 VLTQAPGTLSLSPGERATFSCRSSHSIRSRR-VAWYQHK 188 (256)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCTTCC-EEEEEEC
T ss_pred EEEecCCeEEEeCCCCEEEEEEECCCcCCee-EEEEEEC
Confidence 2221111 125789999999977544223 4467764
No 132
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.61 E-value=1.2e-07 Score=72.04 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee---EEEEEEeccCCCceeecCCCC---CCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~i~l~~~P~p~~~~~~~~~---~~~~~~~L~w~~~s 79 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..|.. ...+.|...+.+|.+...... ..+..+.|.|.+.+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g 142 (438)
T 1qgc_4 63 PDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 142 (438)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred cCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEcc
Confidence 478988776778899999999999999999999998743 234555443334443321111 13568999999866
Q ss_pred C-CCCcceEE
Q psy17207 80 Y-TPLEEFKI 88 (123)
Q Consensus 80 ~-~pi~~y~v 88 (123)
. ++...+.|
T Consensus 143 ~~p~~~~v~W 152 (438)
T 1qgc_4 143 FYPKDINVKW 152 (438)
T ss_dssp EBSSCEEEEE
T ss_pred ccCCCcEEEE
Confidence 3 33224443
No 133
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.61 E-value=1.8e-07 Score=74.69 Aligned_cols=84 Identities=18% Similarity=0.255 Sum_probs=57.0
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeecC-CCCCCCCeEEEEEEe
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSH-PQGRLPNSYNITWMV 77 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~~-~~~~~~~~~~L~w~~ 77 (123)
+|..++|+.+... .+.|.|.+++..|+|.|+|.|.|..|.... .+.|...|..+..... .....+..+.|.|.+
T Consensus 506 ~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 583 (642)
T 1e07_A 506 SLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHS 583 (642)
T ss_pred eCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEe
Confidence 3556677777532 468999999999999999999999998643 3444444443332211 111256789999999
Q ss_pred CCCCCCcceEE
Q psy17207 78 SSYTPLEEFKI 88 (123)
Q Consensus 78 ~s~~pi~~y~v 88 (123)
.+.++. .+.|
T Consensus 584 ~g~p~p-~v~W 593 (642)
T 1e07_A 584 ASNPSP-QYSW 593 (642)
T ss_pred ccCCCC-eEEE
Confidence 887665 4443
No 134
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.60 E-value=2.7e-07 Score=62.64 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=54.0
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCC--ceeecC---CCCCCCCeEEEEEEe
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNP--AIFRSH---PQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p--~~~~~~---~~~~~~~~~~L~w~~ 77 (123)
+.|+.+.. .+....|.|.+++..|+|.|+|.|.|..|.....+.|.. .|.. +.+... .....+..+.|.|.+
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (197)
T 2j8h_A 49 GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF 128 (197)
T ss_dssp SSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE
Confidence 35776653 455679999999999999999999999999887766553 2211 111000 001236778999998
Q ss_pred CCCCCCcceE
Q psy17207 78 SSYTPLEEFK 87 (123)
Q Consensus 78 ~s~~pi~~y~ 87 (123)
.+.++. .+.
T Consensus 129 ~g~p~p-~i~ 137 (197)
T 2j8h_A 129 SGKPDP-VIT 137 (197)
T ss_dssp EEESCC-EEE
T ss_pred EecCCC-cEE
Confidence 876554 344
No 135
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.60 E-value=7.8e-08 Score=77.58 Aligned_cols=51 Identities=24% Similarity=0.358 Sum_probs=47.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.||.+...+...+|.|.++...|+|.|+|.|+|.+|++++.+.|.+
T Consensus 522 el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 522 ELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEE
Confidence 577889999998888999999999999999999999999999999988764
No 136
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.60 E-value=6e-08 Score=66.17 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE--E--EEEEeccCCCceeecCCCCCCCCeEEEEEEe-CCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR--A--YLELSGKPNPAIFRSHPQGRLPNSYNITWMV-SSY 80 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~--~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~-~s~ 80 (123)
.+|+.+.. ..|.|.+++..|+|.|+|.|.|..|... . .+.+...|..+..........+..+.|.|.+ .+.
T Consensus 60 ~~r~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 135 (209)
T 1nbq_A 60 EDRVTFLP----TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGS 135 (209)
T ss_dssp TTTCEEET----TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCB
T ss_pred cCceEeec----cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCC
Confidence 45666652 6899999999999999999999876332 2 3444455554433221112256789999997 555
Q ss_pred CCCcceEE
Q psy17207 81 TPLEEFKI 88 (123)
Q Consensus 81 ~pi~~y~v 88 (123)
++. .+.|
T Consensus 136 p~~-~v~W 142 (209)
T 1nbq_A 136 PPS-EYTW 142 (209)
T ss_dssp SCC-EEEE
T ss_pred CCc-eeEE
Confidence 544 4553
No 137
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.60 E-value=4.3e-07 Score=62.11 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=49.8
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeE----EEEEEeccCCCceeecCCC--CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.....|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.+.+|.+...+. ...++.+.|.|.+.+.+| .|.
T Consensus 54 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~--~~~- 130 (188)
T 1oll_A 54 INKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MFL- 130 (188)
T ss_dssp CCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCS--EEE-
T ss_pred cceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCC--EEE-
Confidence 3467899999999999999999999766432 3455554443444432221 125789999999866443 344
Q ss_pred EeEE
Q psy17207 89 KYRK 92 (123)
Q Consensus 89 ~yr~ 92 (123)
|||.
T Consensus 131 w~k~ 134 (188)
T 1oll_A 131 LLKE 134 (188)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 4554
No 138
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.60 E-value=1.5e-07 Score=67.04 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceeec-CCC--CCCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s 79 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..+... ..+.|...+.+|.+.. .+. ...+..+.|.|.+.+
T Consensus 97 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 176 (252)
T 3bkj_L 97 PDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 176 (252)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEee
Confidence 4788887667778999999999999999999999876432 2344544333444332 111 113568999999876
Q ss_pred CCC
Q psy17207 80 YTP 82 (123)
Q Consensus 80 ~~p 82 (123)
..|
T Consensus 177 ~~p 179 (252)
T 3bkj_L 177 FYP 179 (252)
T ss_dssp EBS
T ss_pred EeC
Confidence 434
No 139
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.59 E-value=2.3e-07 Score=64.48 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce----e--EEEEEEe-ccCCCceee-cCC--CCCCCCeEEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK----H--RAYLELS-GKPNPAIFR-SHP--QGRLPNSYNITW 75 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~--~~~i~l~-~~P~p~~~~-~~~--~~~~~~~~~L~w 75 (123)
++|+.+...+....|+|.+++.+|+|.|.|.+.|..|. . ...+.|. ..+.+|.+. ..+ ....+..+.|.|
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 142 (215)
T 3nl4_H 63 KGRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGC 142 (215)
T ss_dssp TTTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEE
T ss_pred cCCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEE
Confidence 57898877777889999999999999999999998653 1 1234444 223334332 111 112467899999
Q ss_pred EeCCCCC
Q psy17207 76 MVSSYTP 82 (123)
Q Consensus 76 ~~~s~~p 82 (123)
.+.+.+|
T Consensus 143 ~~~~~~p 149 (215)
T 3nl4_H 143 LVKGYLP 149 (215)
T ss_dssp EEEEEBS
T ss_pred EEeeeeC
Confidence 9876544
No 140
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.59 E-value=1.5e-07 Score=63.49 Aligned_cols=47 Identities=30% Similarity=0.449 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+.|+.+......+.|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 145 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 145 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 56788776677789999999999999999999999999998887753
No 141
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.59 E-value=2e-07 Score=72.69 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEecc-CCCceeecCC---CCCCCCeEEEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGK-PNPAIFRSHP---QGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~~-P~p~~~~~~~---~~~~~~~~~L~w~ 76 (123)
++||.+...+....|.|.+++.+|+|.|+|.|.|..|.. ...+.|... ..+|.+...+ ....+..+.|.|.
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~ 137 (523)
T 2rcj_C 58 PTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCL 137 (523)
T ss_pred CCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEE
Confidence 478886666667899999999999999999999988742 223444332 2234332111 1124668999999
Q ss_pred eCCCCCC-cceE
Q psy17207 77 VSSYTPL-EEFK 87 (123)
Q Consensus 77 ~~s~~pi-~~y~ 87 (123)
+.+.+|. ..+.
T Consensus 138 ~~g~~p~~~~v~ 149 (523)
T 2rcj_C 138 ISDFYPGAVTVA 149 (523)
T ss_pred eccccCCceEEE
Confidence 9876653 3444
No 142
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.59 E-value=4.8e-08 Score=73.76 Aligned_cols=66 Identities=20% Similarity=0.135 Sum_probs=47.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s~~pi 83 (123)
.+.|.|.+++.+|+|.|+|.|.|..|.......|..... |.+.... ....+..+.|.|.+.+.++.
T Consensus 257 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~-P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p 325 (384)
T 3kld_A 257 NGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKP 325 (384)
T ss_dssp SCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-EEEEECCCCEEECTTCCEEEECEEEEESCC
T ss_pred CcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecC-CccccCCCceEecCCCCEEEEeECCccCCC
Confidence 468999999999999999999999999987766553211 1222111 11246789999998876554
No 143
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=2.2e-07 Score=57.69 Aligned_cols=52 Identities=19% Similarity=0.406 Sum_probs=40.3
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE--EEEEeccCCCc
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPA 57 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~i~l~~~P~p~ 57 (123)
+|..+.||.+...+....|.|.+++.+|+|.|+|. +|.... .+.|.+.|.+|
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 47 ELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp BCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEEECSCCCC
T ss_pred ECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEEeCccCCC
Confidence 46677899998777788999999999999999998 555554 44555666554
No 144
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.59 E-value=1.8e-07 Score=67.40 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCC------Cc---------------eee-
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPN------PA---------------IFR- 60 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~------p~---------------~~~- 60 (123)
++|+.+...+....|+|.+++.+|+|.|.|.|.|..+... ..+.|...+. || .+.
T Consensus 78 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~ 157 (268)
T 1x9q_A 78 PDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDE 157 (268)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEE
T ss_pred cccEEEEcCCCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEEC
Confidence 5799887666778999999999999999999999865322 2333333221 11 111
Q ss_pred c-CCCCCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 61 S-HPQGRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 61 ~-~~~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
. ......+..+.|.|.+.+.++......|||..
T Consensus 158 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 191 (268)
T 1x9q_A 158 TGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQS 191 (268)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEecCccccccEEEEEEeC
Confidence 0 11122578999999987665433345577764
No 145
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.58 E-value=2.3e-07 Score=73.12 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=51.4
Q ss_pred cCCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecC--CCCCCCCeEEEEEEeCC
Q psy17207 5 TTERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH--PQGRLPNSYNITWMVSS 79 (123)
Q Consensus 5 ~d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~--~~~~~~~~~~L~w~~~s 79 (123)
.++|+.+... .....|.|.+++.+|+|.|+|+| |..|.....+.|.....||.+... .....+..+.|.|.+.+
T Consensus 391 ~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~ 468 (585)
T 2ocw_A 391 YEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPC 468 (585)
T ss_pred cCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecC
Confidence 3567777642 22345999999999999999999 999998887777654333333221 11225788999999864
No 146
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.58 E-value=2.4e-07 Score=64.26 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=49.4
Q ss_pred EEEEcccCCCCCeeEEEEEEcCC-ceeEEEEEEe--ccCCCceeecCCC---CCCCCeE-EEEEEe-CCCCCCcceEEEe
Q psy17207 19 TLMIRKVVASDFGNYSCEATNPM-GKHRAYLELS--GKPNPAIFRSHPQ---GRLPNSY-NITWMV-SSYTPLEEFKIKY 90 (123)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~i~l~--~~P~p~~~~~~~~---~~~~~~~-~L~w~~-~s~~pi~~y~v~y 90 (123)
.|.|.+++.+|+|.|+|.|.|.. |.....+.|. ..|..+.+..... ...+..+ .|.|.+ .+.++. .+. ||
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p-~i~-W~ 155 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAP-KIT-WY 155 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCC-EEE-EE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCC-EEE-EE
Confidence 49999999999999999999997 7777765554 4666666554322 1245556 999998 555443 344 44
Q ss_pred E
Q psy17207 91 R 91 (123)
Q Consensus 91 r 91 (123)
+
T Consensus 156 ~ 156 (231)
T 2pet_A 156 R 156 (231)
T ss_dssp E
T ss_pred E
Confidence 4
No 147
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.58 E-value=3.1e-07 Score=57.51 Aligned_cols=66 Identities=17% Similarity=0.367 Sum_probs=53.3
Q ss_pred ccCCCc-eeecCCCCCCCCeEEEEEEeCCCCCCcceEEEeEEcCCCCCCceeeeeccccccccceeeeeeec
Q psy17207 52 GKPNPA-IFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYRKIPGNEPSPMSNQLTGTNQYQNRRLVRKITE 122 (123)
Q Consensus 52 ~~P~p~-~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (123)
+.|.|. .|.+.+.+. .++..|.|.+++.+||.+|++.||++.. +..|.++.+.+ +.|++.++.|-+
T Consensus 4 ~~~gpa~v~is~~~s~-pdsh~iqW~~~s~s~I~eyiL~~R~k~~-~g~Wke~~Ip~---h~nSYtI~GL~P 70 (98)
T 1oww_A 4 GSSGPVEVFITETPSQ-PNSHPIQWNAPQPSHISKYILRWRPKNS-VGRWKEATIPG---HLNSYTIKGLKP 70 (98)
T ss_dssp --CCCCEEECCCCSSC-TTCEEEEEECCSSSCEEEEEEEEEETTC-SSCCEEEEECS---SCCEEEECSCCS
T ss_pred CCCcceEEEecCCCCC-CCccceEEecCCCCCceEEEEEEEEcCC-CCceeEEEecC---ccceEEEecCCC
Confidence 456777 566555544 8999999999999999999999999876 68899998887 888888887654
No 148
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.58 E-value=1.1e-07 Score=66.88 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEe--ccCCCceeecCCC----CCCCCeEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELS--GKPNPAIFRSHPQ----GRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~--~~P~p~~~~~~~~----~~~~~~~~L~ 74 (123)
.+|+.+... ....|.|.+++.+|+|.|+|.|.|..|.. ...+.|. ..|.|+.+..... ...+..+.|.
T Consensus 79 ~~r~~~~~~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~ 157 (250)
T 2fbo_J 79 LGRASVANL-AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMT 157 (250)
T ss_dssp TTTEECSCT-TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEEC
T ss_pred CceEEeccC-CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEE
Confidence 355555432 24579999999999999999999988753 3444444 4433433322111 1247889999
Q ss_pred EEeCCCCCCcceEEEeEE
Q psy17207 75 WMVSSYTPLEEFKIKYRK 92 (123)
Q Consensus 75 w~~~s~~pi~~y~v~yr~ 92 (123)
|.+.+.++. .+. ||+.
T Consensus 158 C~~~g~p~p-~v~-W~k~ 173 (250)
T 2fbo_J 158 CPCTDCANA-NVT-WYTG 173 (250)
T ss_dssp CCEESCTTC-EEE-EEEE
T ss_pred EEecCCCCC-eeE-EEeC
Confidence 999875554 445 4554
No 149
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.58 E-value=3.1e-07 Score=65.74 Aligned_cols=86 Identities=17% Similarity=0.137 Sum_probs=53.9
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE------EEEEEec-----------------cCCCceee
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR------AYLELSG-----------------KPNPAIFR 60 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~------~~i~l~~-----------------~P~p~~~~ 60 (123)
++|+.+. ......+|.|.+++.+|+|.|+|.|.|..|... ..+.|.. .+.++.+.
T Consensus 62 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~ 141 (256)
T 3tf7_C 62 VNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVT 141 (256)
T ss_dssp STTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEE
T ss_pred CCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEE
Confidence 5688773 345678899999999999999999999876321 1233333 11233332
Q ss_pred cCCC---CCCCCeEEEEEEeCCCCCCcceEEEeEEcC
Q psy17207 61 SHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYRKIP 94 (123)
Q Consensus 61 ~~~~---~~~~~~~~L~w~~~s~~pi~~y~v~yr~~~ 94 (123)
..+. ...+..+.|.|.+.+..| ...|||...
T Consensus 142 ~~p~~~~v~~G~~v~L~C~~~~~~~---~v~W~k~~~ 175 (256)
T 3tf7_C 142 QSPRNKVTVTGENVTLSCRQTNSHN---YMYWYRQDT 175 (256)
T ss_dssp ESCSEEEEETTCCEEECEEECSCCS---EEEEEEECT
T ss_pred ecCCEEEEeCCCcEEEEEEcCCCce---EEEEEEECC
Confidence 2221 125788999999876533 355677543
No 150
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.58 E-value=1.7e-07 Score=63.23 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=50.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC-CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~-~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
..+.|.|.+++.+|+|.|+|.|.|..+.....+.|.. .+........ ...+..+.|.|.+.+.+|...|.|
T Consensus 52 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~V~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W 123 (175)
T 1fnl_A 52 QASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHI--GWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 123 (175)
T ss_dssp SCSEEEESSCCGGGCEEEEEECSSSCCCCCEEEEEEC--SSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEE
T ss_pred CceEEEEeCCCcccCEEEEEEeeCCcccccEEEEEeC--CCceeeCCCceecCCCCEEEEEEcCCCCCceEEEE
Confidence 4568999999999999999999998887766666653 2222222111 125788999999988777655553
No 151
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.58 E-value=3.1e-07 Score=67.24 Aligned_cols=64 Identities=14% Similarity=0.211 Sum_probs=47.1
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCce-------eEEEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCC
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGK-------HRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSS 79 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~-------~~~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s 79 (123)
....|.|.+++.+|+|.|+|.|.|..|. ....+.|.+.+.+|.+...+ ....+..+.|.|.+..
T Consensus 172 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~ 244 (316)
T 3vh8_G 172 SKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS 244 (316)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS
T ss_pred ceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC
Confidence 4568999999999999999999999884 33456666655555544322 2235789999999874
No 152
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.57 E-value=6.6e-07 Score=63.74 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=53.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee----E--EEEEEeccC-----------CCceeecCCC--
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH----R--AYLELSGKP-----------NPAIFRSHPQ-- 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~----~--~~i~l~~~P-----------~p~~~~~~~~-- 64 (123)
.+|+.+..+ +....|.|.+++.+|+|.|+|.|.|..|.. . ..+.|...+ .++.+...+.
T Consensus 72 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~ 151 (257)
T 3gkz_A 72 KSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIM 151 (257)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEE
T ss_pred cccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceE
Confidence 468887643 456789999999999999999999972211 1 133443331 1222222111
Q ss_pred -CCCCCeEEEEEEeCCCCCCcceEEEeEEc
Q psy17207 65 -GRLPNSYNITWMVSSYTPLEEFKIKYRKI 93 (123)
Q Consensus 65 -~~~~~~~~L~w~~~s~~pi~~y~v~yr~~ 93 (123)
...+..+.|.|.+.+.++... ..|||..
T Consensus 152 ~v~~G~~v~L~C~~~~~~~~~~-v~W~k~~ 180 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSVSSSH-LYWYQQK 180 (257)
T ss_dssp EECTTCCEEEEEEESSCCCGGG-EEEEEEC
T ss_pred EEeCCCcEEEEEEEccCccceE-EEEEEEC
Confidence 125789999999987554323 4467764
No 153
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.57 E-value=2.4e-07 Score=64.05 Aligned_cols=76 Identities=17% Similarity=0.270 Sum_probs=50.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC--ceeEEEEEEec-cCCCceee-cC--CCCCCCCeEEEEEEe
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM--GKHRAYLELSG-KPNPAIFR-SH--PQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~--G~~~~~i~l~~-~P~p~~~~-~~--~~~~~~~~~~L~w~~ 77 (123)
++|+.+..+ +....|.|.+++.+|+|.|+|.|.|.. |.. ..+.|.. .+.+|.+. .. .....+..+.|.|.+
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~-~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 142 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQG-TLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 142 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSSCBCCC-EEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEE
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCcccccc-eEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEE
Confidence 578888642 346799999999999999999999964 221 2344443 23344332 11 112256889999999
Q ss_pred CCCCC
Q psy17207 78 SSYTP 82 (123)
Q Consensus 78 ~s~~p 82 (123)
.+..|
T Consensus 143 ~g~~P 147 (210)
T 3d9a_H 143 KGYFP 147 (210)
T ss_dssp EEEBS
T ss_pred eeEec
Confidence 77533
No 154
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.57 E-value=7.6e-08 Score=67.35 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee--E-E--EEEEeccC-CCceeec-CCC--CCCCCeEEEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH--R-A--YLELSGKP-NPAIFRS-HPQ--GRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~-~--~i~l~~~P-~p~~~~~-~~~--~~~~~~~~L~w~ 76 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..|.. . . .+.|...| .+|.+.. .+. ...+..+.|.|.
T Consensus 79 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~ 158 (234)
T 2j6e_L 79 PDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCL 158 (234)
T ss_dssp CTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEEC
T ss_pred cccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEE
Confidence 468888766677899999999999999999999998831 1 1 23332222 2332221 111 113568899999
Q ss_pred eCCCCCC-cceEE
Q psy17207 77 VSSYTPL-EEFKI 88 (123)
Q Consensus 77 ~~s~~pi-~~y~v 88 (123)
+.+.+|. ..+.|
T Consensus 159 ~~g~~p~~~~v~W 171 (234)
T 2j6e_L 159 ISDFFPGAVTVAW 171 (234)
T ss_dssp CCBCSSCCCEEEE
T ss_pred EEEEcCCceEEEE
Confidence 8875443 34443
No 155
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.57 E-value=2e-07 Score=60.25 Aligned_cols=47 Identities=11% Similarity=0.169 Sum_probs=38.4
Q ss_pred cCCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 5 TTERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|+.+.. .....+|.|.+++.+|+|.|+|.|.|. |.....+.|..
T Consensus 52 ~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V 99 (124)
T 3rbg_A 52 KNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIV 99 (124)
T ss_dssp CSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEE
T ss_pred cCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEE
Confidence 567887752 344689999999999999999999999 98888766654
No 156
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.57 E-value=9.1e-08 Score=63.28 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=33.7
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
.++||.+...+....|+|.+++.+|+|.|+|.|.|..|.
T Consensus 64 ~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~ 102 (133)
T 3khq_A 64 EEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSAN 102 (133)
T ss_dssp TTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC--
T ss_pred eCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCCC
Confidence 468999887777889999999999999999999999873
No 157
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.56 E-value=3.6e-07 Score=63.41 Aligned_cols=82 Identities=12% Similarity=0.174 Sum_probs=52.8
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee------EEEEEEecc-CCCceee-cC--CCCCCCCeEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSGK-PNPAIFR-SH--PQGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~i~l~~~-P~p~~~~-~~--~~~~~~~~~~L 73 (123)
++|+.+..+ +....|.|.+++.+|+|.|+|.|.|..|.. ...+.|... +.+|.+. .. .....+..+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTL 144 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEE
Confidence 478887643 346799999999999999999999987422 123444442 2334332 11 11235788999
Q ss_pred EEEeCC-CCCCcceE
Q psy17207 74 TWMVSS-YTPLEEFK 87 (123)
Q Consensus 74 ~w~~~s-~~pi~~y~ 87 (123)
.|.+.+ +++...+.
T Consensus 145 ~C~~~g~~P~p~~v~ 159 (219)
T 1c1e_H 145 GCLVKGYFPEPVTVT 159 (219)
T ss_dssp EEEEEEEBSSCCEEE
T ss_pred EEEcccccCCCeEEE
Confidence 999987 44332444
No 158
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.56 E-value=1.1e-07 Score=71.08 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=48.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.. +|.............+..+.|.|.+.+.++. .|.|
T Consensus 270 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W 341 (388)
T 2v5m_A 270 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIK-TVSW 341 (388)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCC-EEEE
T ss_pred CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCC-eEEE
Confidence 48999999999999999999999999887766654 2211111100111246789999999876654 3443
No 159
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.55 E-value=4.7e-07 Score=62.96 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=50.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEec-cCCCceeec-C--CCCCCCCeEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG-KPNPAIFRS-H--PQGRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~-~P~p~~~~~-~--~~~~~~~~~~L~ 74 (123)
++|+.+..+ +....|+|.+++.+|+|.|.|.+.|..|.. ...+.|.. .+.+|.+.. . .....+..+.|.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 146 (220)
T 1pz5_B 67 KGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLG 146 (220)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEE
T ss_pred CCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEE
Confidence 478888643 345689999999999999999999986432 12444443 233343321 1 112357889999
Q ss_pred EEeCCC
Q psy17207 75 WMVSSY 80 (123)
Q Consensus 75 w~~~s~ 80 (123)
|.+.+.
T Consensus 147 C~~~g~ 152 (220)
T 1pz5_B 147 CLVKGY 152 (220)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
No 160
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.54 E-value=1.1e-07 Score=66.16 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=54.7
Q ss_pred CCCEEEEE-----cCCEEEEEEcccCCCCCeeEEEEEEcCC-ceeEEEEEEec--cCCCceeecCCCCCCCCeE-EEEEE
Q psy17207 6 TERRIMET-----RGSRHTLMIRKVVASDFGNYSCEATNPM-GKHRAYLELSG--KPNPAIFRSHPQGRLPNSY-NITWM 76 (123)
Q Consensus 6 d~R~~i~~-----~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~i~l~~--~P~p~~~~~~~~~~~~~~~-~L~w~ 76 (123)
.+|+.+.. .....+|.|.+++.+|+|.|+|.+.|.. |.....+.|.. .|.......... ..+..+ .|.|.
T Consensus 61 ~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~ 139 (221)
T 3eow_R 61 SKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCV 139 (221)
T ss_dssp CSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEE
T ss_pred CCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEE
Confidence 56777764 2246689999999999999999999987 77777666554 333222222222 345667 59999
Q ss_pred eC-CCCCCcceEEEeEE
Q psy17207 77 VS-SYTPLEEFKIKYRK 92 (123)
Q Consensus 77 ~~-s~~pi~~y~v~yr~ 92 (123)
+. ++++. .+. ||+.
T Consensus 140 ~~~g~P~p-~v~-W~k~ 154 (221)
T 3eow_R 140 STGGRPPA-QIT-WHSD 154 (221)
T ss_dssp EESCSSCC-CEE-EECS
T ss_pred CCCccCCC-eeE-EEeC
Confidence 76 44443 444 4443
No 161
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.53 E-value=1e-07 Score=64.30 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=50.8
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
..+.|.|.+++.+|+|.|+|.|.|..+.....+.|.. .+....... ....+..+.|.|.+.+..|...|.|
T Consensus 49 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 120 (176)
T 1f2q_A 49 TNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFS--DWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIY 120 (176)
T ss_dssp CSSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEEEC--SSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEE
T ss_pred CceEEEEeccceecCEEEEEEcCCccccccEEEEEeC--cceeecCCcceeeCCCCEEEEEEecCCCCceEEEE
Confidence 3578999999999999999999999888777777662 222221111 1125788999999977666655553
No 162
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.53 E-value=1.9e-07 Score=68.08 Aligned_cols=89 Identities=13% Similarity=0.135 Sum_probs=54.2
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcC------------CceeEEEEEEec-cC-----------CCcee
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP------------MGKHRAYLELSG-KP-----------NPAIF 59 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~------------~G~~~~~i~l~~-~P-----------~p~~~ 59 (123)
++|+.+. ..+....|.|.+++.+|+|.|+|.+.|. +|.. ..+.|.. .+ .++.+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~-~~L~V~~~~~~~~~~~~~~~~~~~~v 143 (280)
T 3fku_X 65 QGRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQG-TLVTVSSGGGGSGGGGSGGGGIQPGL 143 (280)
T ss_dssp TTTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCC-CEEEECC--------------CCCSB
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCC-EEEEEcCCCCccCCCCCCceEeeeEE
Confidence 3688887 3455678999999999999999999997 2221 1233332 00 12222
Q ss_pred ecCC--CCCCCCeEEEEEEeCCCCCCcceEEEeEEcCC
Q psy17207 60 RSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRKIPG 95 (123)
Q Consensus 60 ~~~~--~~~~~~~~~L~w~~~s~~pi~~y~v~yr~~~~ 95 (123)
...+ ....+.++.|.|.+.+..+...+..|||....
T Consensus 144 ~~~p~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~ 181 (280)
T 3fku_X 144 TQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQG 181 (280)
T ss_dssp BCCSEEEECTTCCEEEEEECCCCCCCTTCCEEEEECSS
T ss_pred EeCCcEEEecCCCEEEEEEecCCCCCCceEEEEEECCC
Confidence 1111 11257899999998774332334557876543
No 163
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.6e-07 Score=61.56 Aligned_cols=36 Identities=25% Similarity=0.196 Sum_probs=32.5
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
...|+|.++...|+|.|+|+|.|..|..+.++.|..
T Consensus 79 ~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V 114 (118)
T 2edn_A 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114 (118)
T ss_dssp EEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEE
T ss_pred eEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEE
Confidence 578999999999999999999999999988776654
No 164
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.53 E-value=5.2e-07 Score=63.36 Aligned_cols=77 Identities=16% Similarity=0.197 Sum_probs=51.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-----e--e---EEEEEEec-cCCCce-eecCC--CCCCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K--H---RAYLELSG-KPNPAI-FRSHP--QGRLPN 69 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~---~~~i~l~~-~P~p~~-~~~~~--~~~~~~ 69 (123)
++|+.+..+ .....|+|.+++.+|+|.|.|.+.|..| . . ...+.|.. .+.+|. +...+ ....+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGG 144 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCC
Confidence 479988753 4567999999999999999999999875 2 1 12344443 223333 22211 112577
Q ss_pred eEEEEEEeCCCCC
Q psy17207 70 SYNITWMVSSYTP 82 (123)
Q Consensus 70 ~~~L~w~~~s~~p 82 (123)
.+.|.|.+.+..|
T Consensus 145 ~v~L~C~~~g~~P 157 (225)
T 1op3_H 145 TAALGCLVKDYFP 157 (225)
T ss_dssp EEEEEEEEEEEBS
T ss_pred cEEEEEEEEeEEC
Confidence 8999999876533
No 165
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.52 E-value=1e-06 Score=61.58 Aligned_cols=71 Identities=27% Similarity=0.411 Sum_probs=50.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec---cCCCceeecC-CC---CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG---KPNPAIFRSH-PQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~---~P~p~~~~~~-~~---~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...|.|.+++..|+|.|+|.|.|..|.....+.|.. .|.++.+... +. ...+..+.|.|.+.+.++. .+.|
T Consensus 71 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p-~v~W 148 (241)
T 3grw_A 71 QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-HIQW 148 (241)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC-EEEE
T ss_pred ceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC-EEEE
Confidence 458999999999999999999999999888766553 2233333211 11 1246789999999777655 4554
No 166
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.52 E-value=1.3e-07 Score=59.72 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=33.0
Q ss_pred ccccC-CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 2 RLETT-ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 2 ~l~~d-~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|..+ .||.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 55 ~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 94 (104)
T 1pd6_A 55 EIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGE 94 (104)
T ss_dssp EECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETTE
T ss_pred ECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECCC
Confidence 34555 7999887777889999999999999999999653
No 167
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.52 E-value=1.1e-06 Score=62.95 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=53.2
Q ss_pred CCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-EEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCC
Q psy17207 6 TERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSY 80 (123)
Q Consensus 6 d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~ 80 (123)
+.|+.+. ..+..+.|.|.+++.+|+|.|+|.|.|..|.. ...+.|..... +.+...+. ...+..+.|.|.+.+.
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~-~~~~~~~~~~~~~~g~~v~l~C~~~~~ 127 (291)
T 1qz1_A 49 QQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQK-LMFKNAPTPQEFKEGEDAVIVCDVVSS 127 (291)
T ss_dssp CSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECC-SEEEECCSSEEEETTSCEEECCEEECS
T ss_pred CceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeecc-ccccCCCCcccccCCCeEEEEEEeccC
Confidence 4577664 34567899999999999999999999999643 45555554322 22222111 1256789999998776
Q ss_pred CCCcceE
Q psy17207 81 TPLEEFK 87 (123)
Q Consensus 81 ~pi~~y~ 87 (123)
++. .+.
T Consensus 128 p~~-~v~ 133 (291)
T 1qz1_A 128 LPP-TII 133 (291)
T ss_dssp SCC-EEE
T ss_pred CCC-EEE
Confidence 554 344
No 168
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.51 E-value=1.6e-07 Score=63.45 Aligned_cols=79 Identities=20% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE-EE--EEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-AY--LELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~~--i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~p 82 (123)
+.|+.+...+ ..|.|.+++..|+|.|+|.+.|..|... .. +.|...|.............+..+.|.|.+.+.++
T Consensus 52 ~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 129 (192)
T 2iep_A 52 DTRYSIRENG--QLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPK 129 (192)
T ss_dssp CTTEEEEGGG--TEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESC
T ss_pred CccEEEcCCc--cEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCC
Confidence 5677776433 4799999999999999999999998843 33 34444332111100001124678899999877655
Q ss_pred CcceE
Q psy17207 83 LEEFK 87 (123)
Q Consensus 83 i~~y~ 87 (123)
. .+.
T Consensus 130 ~-~v~ 133 (192)
T 2iep_A 130 P-SVS 133 (192)
T ss_dssp C-EEE
T ss_pred c-eEE
Confidence 4 344
No 169
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.51 E-value=5.3e-07 Score=65.12 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=52.9
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCC--CceeecC---CCCCCCCeEEEEEEe
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPN--PAIFRSH---PQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~--p~~~~~~---~~~~~~~~~~L~w~~ 77 (123)
+.|+.+.. .+..+.|.|.+++.+|+|.|+|.|.|..|.....+.|.. .|. .+..... .....+..+.|.|.+
T Consensus 49 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (305)
T 2nzi_A 49 GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF 128 (305)
T ss_dssp SSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEE
T ss_pred CCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEE
Confidence 35776653 455679999999999999999999999999887766653 221 1111100 011246789999998
Q ss_pred CCCCCC
Q psy17207 78 SSYTPL 83 (123)
Q Consensus 78 ~s~~pi 83 (123)
.+.++.
T Consensus 129 ~g~p~p 134 (305)
T 2nzi_A 129 SGKPDP 134 (305)
T ss_dssp EEESCC
T ss_pred CCCCCC
Confidence 776544
No 170
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.51 E-value=2.1e-07 Score=62.81 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=43.8
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCC-CCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVA-SDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..+.|+.+...+....|.|.++.. +|+|.|+|.|.|.+|....++.|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 143 LLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp ECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 35667888888777778999999995 8999999999999999998877654
No 171
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.50 E-value=7.9e-07 Score=70.93 Aligned_cols=84 Identities=18% Similarity=0.294 Sum_probs=56.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeecC-CCCCCCCeEEEEEEe
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSH-PQGRLPNSYNITWMV 77 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~~-~~~~~~~~~~L~w~~ 77 (123)
+|..++|+.+... .+.|.|.++...|+|.|+|.|.|..|.... .+.|...|..+.+... .....+..+.|.|.+
T Consensus 328 ~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 405 (642)
T 1e07_A 328 SLPVSPRLQLSND--NRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHA 405 (642)
T ss_pred cCCCcCCEEEeCC--CCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEc
Confidence 3555677777532 468999999999999999999999997543 3444445544333211 112257789999999
Q ss_pred CCCCCCcceEE
Q psy17207 78 SSYTPLEEFKI 88 (123)
Q Consensus 78 ~s~~pi~~y~v 88 (123)
.+.++. .|.|
T Consensus 406 ~g~p~~-~i~W 415 (642)
T 1e07_A 406 ASNPPA-QYSW 415 (642)
T ss_pred CccCCC-eEEE
Confidence 876654 4543
No 172
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.50 E-value=7e-07 Score=64.78 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=53.1
Q ss_pred CCCEEEE--EcCCEEEEEEcccCC-CCCeeEEEEEEcCCceeEEEEEEe--ccC----CCceeecCCCC---CCCCeEEE
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVA-SDFGNYSCEATNPMGKHRAYLELS--GKP----NPAIFRSHPQG---RLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~~i~l~--~~P----~p~~~~~~~~~---~~~~~~~L 73 (123)
+.|+.+. ..+....|.|.+++. .|+|.|+|.|.|..|.....+.|. ..+ .+|.+...+.. ..+..+.|
T Consensus 49 ~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l 128 (304)
T 2yd9_A 49 SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATM 128 (304)
T ss_dssp CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEE
T ss_pred CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEE
Confidence 3566554 344568999999998 999999999999999876655554 322 12343332221 24678999
Q ss_pred EEEeCCCCCC
Q psy17207 74 TWMVSSYTPL 83 (123)
Q Consensus 74 ~w~~~s~~pi 83 (123)
.|.+.+.++.
T Consensus 129 ~C~~~g~p~~ 138 (304)
T 2yd9_A 129 LCAASGNPDP 138 (304)
T ss_dssp CCEEECSSCC
T ss_pred EEECccCCCC
Confidence 9998776554
No 173
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.50 E-value=1.6e-07 Score=57.85 Aligned_cols=35 Identities=31% Similarity=0.447 Sum_probs=31.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+.|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 62 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 62 GILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEeCCChhhCEEEEEEecCCCCccccEEEEEE
Confidence 48999999999999999999999999998877653
No 174
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.50 E-value=4.4e-07 Score=67.49 Aligned_cols=77 Identities=12% Similarity=0.169 Sum_probs=52.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeEE--EEEEec-cCCCceee-cC--CCCCCCCeEEEEEEe
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSG-KPNPAIFR-SH--PQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~i~l~~-~P~p~~~~-~~--~~~~~~~~~~L~w~~ 77 (123)
++|+.+..+ +....|.|.+++.+|+|.|+|.|.|..+.... .+.|.. .+.+|.+. .. .....+..+.|.|.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 478888653 45679999999999999999999997654433 344442 23344332 11 112357899999999
Q ss_pred CCCCC
Q psy17207 78 SSYTP 82 (123)
Q Consensus 78 ~s~~p 82 (123)
.++.|
T Consensus 145 ~g~~P 149 (344)
T 1za6_B 145 KDYFP 149 (344)
T ss_dssp EEEBS
T ss_pred eeEEC
Confidence 77644
No 175
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.50 E-value=4.2e-07 Score=65.45 Aligned_cols=87 Identities=8% Similarity=0.047 Sum_probs=57.1
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCe-eEEEEEEcCCceeEE---EEEEec-cCCCceeecCC---CCCCCCeEEE
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFG-NYSCEATNPMGKHRA---YLELSG-KPNPAIFRSHP---QGRLPNSYNI 73 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~---~i~l~~-~P~p~~~~~~~---~~~~~~~~~L 73 (123)
+|..+.|+.+... ..|.|.+++.+|+| .|+|.|.|..|.... .+.|.. ...+|.+...+ ....+..+.|
T Consensus 132 ~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l 208 (290)
T 2o26_X 132 SLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTV 208 (290)
T ss_dssp CCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEE
T ss_pred CCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEE
Confidence 3455566766543 37999999999999 999999999776443 344432 22445543221 2235788999
Q ss_pred EEEeCCCCCCcceEEEeEE
Q psy17207 74 TWMVSSYTPLEEFKIKYRK 92 (123)
Q Consensus 74 ~w~~~s~~pi~~y~v~yr~ 92 (123)
.|.+.+.++...+.| |+.
T Consensus 209 ~C~~~g~p~p~~i~W-~~~ 226 (290)
T 2o26_X 209 VCTIKDVSTSVNSMW-LKM 226 (290)
T ss_dssp EEEEEESSTTCEEEE-EEE
T ss_pred EEEEecCCcceeEEE-ecC
Confidence 999987655444554 443
No 176
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.50 E-value=1.6e-07 Score=57.81 Aligned_cols=36 Identities=33% Similarity=0.534 Sum_probs=32.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|.|.+++..|+|.|+|.|.|..|....++.|..
T Consensus 64 ~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 64 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 358999999999999999999999999998877753
No 177
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.50 E-value=7.8e-07 Score=63.31 Aligned_cols=88 Identities=13% Similarity=0.116 Sum_probs=54.9
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEecc------------CCCceeecCC---CC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGK------------PNPAIFRSHP---QG 65 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~------------P~p~~~~~~~---~~ 65 (123)
++|+.+..+ +...+|.|.+++.+|+|.|+|.|.|..+... ..+.|... +.++.+...+ ..
T Consensus 66 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v 145 (253)
T 3uzq_A 66 QGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV 145 (253)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE
T ss_pred CCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE
Confidence 478887643 3467899999999999999999999766543 23444321 1122222111 12
Q ss_pred CCCCeEEEEEEeCCCCCCc--ceEEEeEEc
Q psy17207 66 RLPNSYNITWMVSSYTPLE--EFKIKYRKI 93 (123)
Q Consensus 66 ~~~~~~~L~w~~~s~~pi~--~y~v~yr~~ 93 (123)
..+..+.|.|.+.+.++.. ....|||..
T Consensus 146 ~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~ 175 (253)
T 3uzq_A 146 SLGQRATISCRASENVDRYGNSFMHWYQQK 175 (253)
T ss_dssp CTTSCEEEEEEESSCCEETTEECEEEEEEC
T ss_pred eCCCCEEEEEEecCccccCCCcEEEEEEEC
Confidence 2578999999997754431 134467764
No 178
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.50 E-value=3.6e-07 Score=59.16 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=39.1
Q ss_pred ccccCC----------CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccC
Q psy17207 2 RLETTE----------RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKP 54 (123)
Q Consensus 2 ~l~~d~----------R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P 54 (123)
+|..++ ||.+...+..+.|+|++++.+|+|.|+|...+.. ...+.+.|...|
T Consensus 46 ~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~~-~ssA~L~V~~~p 107 (112)
T 2e6q_A 46 ELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPGV-QDSAALTIQESS 107 (112)
T ss_dssp BCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETTE-EEEEEEEEECSS
T ss_pred ECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECCe-eEEEEEEEeCCC
Confidence 566676 9999888888999999999999999987544432 334556665554
No 179
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=1.8e-07 Score=58.05 Aligned_cols=39 Identities=26% Similarity=0.539 Sum_probs=33.7
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 50 ~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~ 88 (102)
T 2eo1_A 50 KLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ 88 (102)
T ss_dssp ECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTE
T ss_pred ECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC
Confidence 356678999888777889999999999999999999764
No 180
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.49 E-value=4.3e-07 Score=65.89 Aligned_cols=66 Identities=26% Similarity=0.231 Sum_probs=49.0
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi 83 (123)
+.|.|.+++..|+|.|+|.|.|..|... ..+.|...+.+|.+...+. ...+..+.|.|.+.+.++.
T Consensus 164 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p 235 (304)
T 2yd9_A 164 GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP 235 (304)
T ss_dssp SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC
T ss_pred eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC
Confidence 4899999999999999999999999887 4566654444444443221 2357889999999876554
No 181
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.49 E-value=1.3e-07 Score=65.92 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=49.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC-CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ-GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~-~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
+.|.|.+++.+|+|.|+|.|.|........+.|...| ........ ...+..+.|.|.+.+.+|...|.|
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~V~~~p--~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W 123 (204)
T 3sgj_C 54 SSYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGW--LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 123 (204)
T ss_dssp SEEEESSCCGGGCEEEEEEETTSBCCCCEEEEEECSS--EEEECSCSEEETTCCEEEEEEEGGGCCCEEEEE
T ss_pred cEEEEecccccCCEEEEEEeCCCcccccEEEEEecCc--eEecCCceeEeCCCcEEEEEEecCCCCCceEEE
Confidence 6899999999999999999999776666666666433 22221111 125788999999987767655654
No 182
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.48 E-value=6.4e-07 Score=62.38 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=50.7
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-----e--eEEEEEEecc-CCCceee-cCC--CCCCCCeEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K--HRAYLELSGK-PNPAIFR-SHP--QGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~~~~i~l~~~-P~p~~~~-~~~--~~~~~~~~~ 72 (123)
++|+.+..+ .....|+|++++.+|+|.|.|.+.|..| . ....+.|... +.+|.+. ..+ ....+..+.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 146 (222)
T 1q9r_B 67 KGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVT 146 (222)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEE
T ss_pred CCceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEE
Confidence 478888653 3467999999999999999999999765 1 1224445432 2333332 211 112578899
Q ss_pred EEEEeCCCCC
Q psy17207 73 ITWMVSSYTP 82 (123)
Q Consensus 73 L~w~~~s~~p 82 (123)
|.|.+.+..|
T Consensus 147 L~C~~~g~~P 156 (222)
T 1q9r_B 147 LGCLVKGYFP 156 (222)
T ss_dssp EEEEEEEEBS
T ss_pred EEEEEccEEC
Confidence 9999976533
No 183
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.48 E-value=1e-07 Score=68.86 Aligned_cols=48 Identities=23% Similarity=0.345 Sum_probs=37.8
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
|..++|+.+. +..+.|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 263 ~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 263 ISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred CCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 3445666665 34679999999999999999999999999999988764
No 184
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.48 E-value=6.5e-07 Score=64.08 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=54.5
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEE-cCCceeEEEEEEecc---CCCceeecCCCC---CCCCeEEEEE
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEAT-NPMGKHRAYLELSGK---PNPAIFRSHPQG---RLPNSYNITW 75 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~-N~~G~~~~~i~l~~~---P~p~~~~~~~~~---~~~~~~~L~w 75 (123)
+..+.|+.+... +.|.|.+++.+|+|.|+|.|. |..|.....+.|... +.+|.+...+.. ..+..+.|.|
T Consensus 132 ~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C 208 (289)
T 3ejj_X 132 VLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVC 208 (289)
T ss_dssp CCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEE
T ss_pred cCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEE
Confidence 345567777543 379999999999999999999 555555555554432 245544432221 2578899999
Q ss_pred EeCCCCCCcceEE
Q psy17207 76 MVSSYTPLEEFKI 88 (123)
Q Consensus 76 ~~~s~~pi~~y~v 88 (123)
.+.+..|...+.|
T Consensus 209 ~~~~~~p~~~i~W 221 (289)
T 3ejj_X 209 SATNAEVGFNVIL 221 (289)
T ss_dssp EEEESSSCCEEEE
T ss_pred EeCCCCCceEEEE
Confidence 9977444444553
No 185
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.47 E-value=1e-06 Score=60.87 Aligned_cols=73 Identities=22% Similarity=0.329 Sum_probs=50.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCC-CceeecC-CC---CCCCCeEEEEEEeCCCCCCcceEEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPN-PAIFRSH-PQ---GRLPNSYNITWMVSSYTPLEEFKIK 89 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~-p~~~~~~-~~---~~~~~~~~L~w~~~s~~pi~~y~v~ 89 (123)
...|.|.+++..|+|.|+|.|.|..|.....+.|.. .+. ++.+... +. ...+..+.|.|.+.+.++. .+. |
T Consensus 75 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~-W 152 (231)
T 3ojm_B 75 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP-HIQ-W 152 (231)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC-EEE-E
T ss_pred cceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC-EEE-E
Confidence 357999999999999999999999999887666553 222 2332211 11 1146788999998776554 444 4
Q ss_pred eE
Q psy17207 90 YR 91 (123)
Q Consensus 90 yr 91 (123)
|+
T Consensus 153 ~~ 154 (231)
T 3ojm_B 153 IK 154 (231)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 186
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.47 E-value=4.7e-07 Score=62.16 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=48.5
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE--eccCCCceeecCCCCCCCCeEEEEEEeCCCCCCc
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLE 84 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l--~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~ 84 (123)
+|+.+. ...++|+|++++.+|+|.|+|.+.+.. .....+.| ..++..|.+.. ....+.|.|.+... |..
T Consensus 60 ~R~~l~--~~~~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~g-p~p 130 (180)
T 2dru_A 60 DRVDLD--KTNGALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEVYEMVSKPMIYW-----ECSNATLTCEVLEG-TDV 130 (180)
T ss_dssp TTEEEC--TTTCCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEEECCCCCCEEEE-----EGGGTEEEEECSSC-TTC
T ss_pred CeEEEe--CCCccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEEECCCCCCEEEe-----cCCCEEEEEEeCCC-CCC
Confidence 677772 234689999999999999999998876 44554444 44444444332 13458999998544 444
Q ss_pred ceEE
Q psy17207 85 EFKI 88 (123)
Q Consensus 85 ~y~v 88 (123)
.|.|
T Consensus 131 ~i~W 134 (180)
T 2dru_A 131 ELKL 134 (180)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4553
No 187
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.46 E-value=6.8e-08 Score=67.67 Aligned_cols=83 Identities=13% Similarity=0.238 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeecCCC---CCCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s 79 (123)
++|+.+...+....|.|.+++.+|+|.|+|.|.|..|.... .+.|...+.+|.+..... ...+..+.|.|.+.+
T Consensus 81 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g 160 (233)
T 3bqu_C 81 PSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 160 (233)
T ss_dssp CTTCCCCEEEEEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred CccEEeeccCCEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEcc
Confidence 45776654445568999999999999999999998764321 344444333444332111 113678999999877
Q ss_pred CCCC-cceEE
Q psy17207 80 YTPL-EEFKI 88 (123)
Q Consensus 80 ~~pi-~~y~v 88 (123)
.+|. ..+.|
T Consensus 161 ~~p~~~~v~W 170 (233)
T 3bqu_C 161 FYPKDINVKW 170 (233)
T ss_dssp EBSSCEEEEE
T ss_pred ccCCceEEEE
Confidence 5443 23443
No 188
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.46 E-value=2.2e-07 Score=57.68 Aligned_cols=45 Identities=24% Similarity=0.496 Sum_probs=35.9
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l 50 (123)
+|..++|+.+...+....|.|.+++.+|+|.|+|+ +|.....+.|
T Consensus 47 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l 91 (103)
T 2e7b_A 47 VLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATL 91 (103)
T ss_dssp BCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCE
T ss_pred ECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEE
Confidence 45677899998888888999999999999999998 4444444333
No 189
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.46 E-value=9.8e-07 Score=61.93 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=50.2
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc----e----eEEEEEEec-cCCCceee-cC--CCCCCCCeE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG----K----HRAYLELSG-KPNPAIFR-SH--PQGRLPNSY 71 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G----~----~~~~i~l~~-~P~p~~~~-~~--~~~~~~~~~ 71 (123)
++|+.+..+ .....|+|.+++.+|+|.|.|.+.|..| . ....+.|.. .+.+|.+. .. .....+..+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v 144 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTV 144 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEE
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcE
Confidence 479988753 3467899999999999999999999753 1 112344443 23333322 11 111356889
Q ss_pred EEEEEeCCCCC
Q psy17207 72 NITWMVSSYTP 82 (123)
Q Consensus 72 ~L~w~~~s~~p 82 (123)
.|.|.+.+..|
T Consensus 145 ~L~C~~~g~~P 155 (223)
T 1dee_B 145 AVGCLAQDFLP 155 (223)
T ss_dssp EEEEEEEEEBS
T ss_pred EEEEEEEEEeC
Confidence 99999876533
No 190
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.46 E-value=2.2e-07 Score=69.37 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=48.2
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
..++|.|.+++..|+|.|+|.|.|..|... ..+.+...+.|...........+..+.|.|.+....|...+.|
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W 135 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITW 135 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEE
Confidence 356899999999999999999999999876 3444444343433222222235788999998633333334554
No 191
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.46 E-value=2.5e-07 Score=67.55 Aligned_cols=41 Identities=29% Similarity=0.380 Sum_probs=34.2
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCce
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI 58 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~ 58 (123)
..|.|.+++..|+|.|+|.|.|.+|.+..++.|...-.||+
T Consensus 268 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 268 AQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp TEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred CEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 47999999999999999999999999999887776434443
No 192
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.45 E-value=2.8e-07 Score=71.22 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=43.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi 83 (123)
...|.|.+++.+|+|.|+|.|.|..|.....+.|...+.|......+ .......+.|.|.+.+.|+.
T Consensus 102 ~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P 169 (423)
T 3qs7_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEP 169 (423)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCC
T ss_pred EEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCC
Confidence 34799999999999999999999999998887776543221110000 01124456789999877554
No 193
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.45 E-value=4.3e-07 Score=64.17 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=45.7
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeec-CCCCCCCCeEEEEEEeCC-CCCCcceEEEeEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS-HPQGRLPNSYNITWMVSS-YTPLEEFKIKYRK 92 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~-~~~~~~~~~~~L~w~~~s-~~pi~~y~v~yr~ 92 (123)
...|.|.+++.+|+|.|+|.+.|..|.....+.|.....|..... ......+..+.|.|.+.+ +++...+. ||+.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~-W~k~ 157 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINIT-WEKQ 157 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEE-EEEE
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEE-EEEC
Confidence 345999999999999999999999998887766654322221111 111223566779999877 44332445 3443
No 194
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.45 E-value=5.3e-07 Score=67.20 Aligned_cols=55 Identities=16% Similarity=0.018 Sum_probs=44.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcC--CceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNP--MGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~p 82 (123)
...|.|.++..+|+|.|+|.|.|. .|.....+.|.... + .+..+.|.|.+.+.++
T Consensus 254 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~----v-------~g~~~~l~C~~~g~p~ 310 (363)
T 1wio_A 254 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR----A-------TQLQKNLTCEVWGPTS 310 (363)
T ss_dssp SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE----E-------CCCSSSEEEEEESSCC
T ss_pred ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE----e-------cCCCeeEEEEEccccC
Confidence 458999999999999999999999 99988887776531 1 1455779999877643
No 195
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.45 E-value=2.7e-07 Score=66.05 Aligned_cols=76 Identities=9% Similarity=0.078 Sum_probs=47.9
Q ss_pred cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecCC-CCCCCCeEEEEEEeCCCCCCcceEEE
Q psy17207 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKIK 89 (123)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi~~y~v~ 89 (123)
......|.|.+++..|+|.|+|.|.|..|.....+.|.. .|.+....... ....+..+.|.|.+.+.++...+.|.
T Consensus 47 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~ 125 (289)
T 3ejj_X 47 ESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLM 125 (289)
T ss_dssp CSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEE
T ss_pred cCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEE
Confidence 345678999999999999999999999998777766654 33331111110 11247789999999876554446653
No 196
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.45 E-value=1.4e-06 Score=61.44 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=46.8
Q ss_pred EEEEcccCCCCCeeEEEEEEcCCceeE----EEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCCCcceEEEeEE
Q psy17207 19 TLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEFKIKYRK 92 (123)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~pi~~y~v~yr~ 92 (123)
.|.|.+++.+|+|.|+|.|.|..|... ..+.|.+.+.+|.+...+ ....++.+.|.|.....++ ..|. |||.
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~-~~~~-W~k~ 142 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRFS-LAKE 142 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCC-SEEE-EEET
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCC-CEEE-EEEC
Confidence 899999999999999999999877433 234455544445443222 1125788999996543333 3444 4443
No 197
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.45 E-value=7.2e-07 Score=63.93 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=51.2
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEE--Eecc-CCCceeecCCC---CCCCCeEEEEE
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLE--LSGK-PNPAIFRSHPQ---GRLPNSYNITW 75 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~--l~~~-P~p~~~~~~~~---~~~~~~~~L~w 75 (123)
+..+.|+.+... ..|.|.+++..|+|.|+|.|.|..|.... .+. |... +.+|.+...+. ...+..+.|.|
T Consensus 132 ~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C 208 (292)
T 4dkd_C 132 LMRHTNYSFSPW---HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVC 208 (292)
T ss_dssp CCSSCCEECCSS---SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEE
T ss_pred cccCCcccccCC---ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEE
Confidence 344456665433 24999999999999999999999886643 444 4432 23444433221 13578999999
Q ss_pred EeCCCCC
Q psy17207 76 MVSSYTP 82 (123)
Q Consensus 76 ~~~s~~p 82 (123)
.+.+.+|
T Consensus 209 ~~~~~~~ 215 (292)
T 4dkd_C 209 SASSVDV 215 (292)
T ss_dssp EEEESSS
T ss_pred EecCCCC
Confidence 9986554
No 198
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.45 E-value=2.3e-07 Score=72.39 Aligned_cols=64 Identities=6% Similarity=0.016 Sum_probs=46.5
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCC
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi 83 (123)
..+.|.|.+++.+|+|.|+|.|.|..|....++.|...- +|.+........+ .|.|.+.+.++.
T Consensus 373 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~-~P~i~~~~~~~~g---~l~C~~~g~P~p 436 (524)
T 2ec8_A 373 YVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT-KPEILTYDRLVNG---MLQCVAAGFPEP 436 (524)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE-EEEEEEEECCSSS---CEEEEEEEESCC
T ss_pred eEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEec-CCeEeecccCcCc---EEEEEEEeecCC
Confidence 357899999999999999999999999998887776421 2233221111122 899999877655
No 199
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.45 E-value=3.5e-07 Score=57.92 Aligned_cols=51 Identities=22% Similarity=0.212 Sum_probs=40.4
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p 56 (123)
++|+.+.. ......|+|.+++.+|+|.|.|.+.+..+.....+.|.+.|.|
T Consensus 60 ~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 60 KNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred CCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 47888763 3456789999999999999999999986666777888776654
No 200
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.44 E-value=6.6e-07 Score=73.26 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=58.3
Q ss_pred cccCCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCC---CCCCeEEEEEEeC
Q psy17207 3 LETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQG---RLPNSYNITWMVS 78 (123)
Q Consensus 3 l~~d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~---~~~~~~~L~w~~~ 78 (123)
|..+.++.+. ..+..+.|.|.++...|+|.|+|.|.|..|....++.|... .||.+...+.. ..+..+.|.|.+.
T Consensus 661 l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~-~~P~~~~~~~~~~v~~G~~v~l~C~~~ 739 (816)
T 3dmk_A 661 ISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY-VPPRWILEPTDKAFAQGSDAKVECKAD 739 (816)
T ss_dssp CCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEE-EEEEEEECCCCEEEETTCCEEEECEEE
T ss_pred cCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEE-eCCceeeecccceecCCCcEEEEEEEe
Confidence 3344455443 23456889999999999999999999999999887766542 12223222211 2477899999998
Q ss_pred CCCCCcceEEEeEE
Q psy17207 79 SYTPLEEFKIKYRK 92 (123)
Q Consensus 79 s~~pi~~y~v~yr~ 92 (123)
+.++. .+. |++.
T Consensus 740 g~P~p-~i~-W~k~ 751 (816)
T 3dmk_A 740 GFPKP-QVT-WKKA 751 (816)
T ss_dssp EESCC-EEE-CCEE
T ss_pred cCCCC-eEE-EEec
Confidence 77655 344 3443
No 201
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.44 E-value=3.6e-06 Score=57.89 Aligned_cols=74 Identities=12% Similarity=0.175 Sum_probs=48.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCc-------eeEEEEEEeccCCCceeecCCC--CCCCCeEEEEEEeCCCCCCcce
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEF 86 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~~~i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~~pi~~y 86 (123)
....|.|.+++.+|+|.|+|.|.|..+ +....+.|.+.+.+|.+...+. ...++.+.|.|.+.+.+ ..|
T Consensus 61 ~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~--~~~ 138 (201)
T 1nkr_A 61 SKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSY--DMY 138 (201)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCC--SEE
T ss_pred ceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCC--ceE
Confidence 357899999999999999999987532 2234566666544554432221 23578999999987633 234
Q ss_pred EEEeEE
Q psy17207 87 KIKYRK 92 (123)
Q Consensus 87 ~v~yr~ 92 (123)
. |||.
T Consensus 139 ~-w~k~ 143 (201)
T 1nkr_A 139 H-LSRE 143 (201)
T ss_dssp E-EEET
T ss_pred E-EEEC
Confidence 4 4553
No 202
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.44 E-value=1.4e-06 Score=63.66 Aligned_cols=83 Identities=8% Similarity=0.042 Sum_probs=55.1
Q ss_pred CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE-----EEEEeccCCCceeecCCCCCCCCeEEEEEEeCCC-C
Q psy17207 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-----YLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-T 81 (123)
Q Consensus 8 R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-----~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~-~ 81 (123)
|+.+.. +..+.|+|.++...| |.|+|.|.|. |.... .+.+..+|.+|...... .....++.|+|.++.. .
T Consensus 56 ~~~~~~-~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~-~~~~~~v~l~W~~~~~~~ 131 (303)
T 1i1r_A 56 QYTIIN-RTASSVTFTDIASLN-IQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCI-VNEGKKMRCEWDGGRETH 131 (303)
T ss_dssp GCEEEE-TTEEEEEECSCCCSE-EEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEE-EETTSCCEEEEECCSCCS
T ss_pred heeeeC-CcEEEEEEcCcCCCc-eEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEE-ECCCCcEEEEccCCCCCC
Confidence 555543 446789999999886 9999999884 43322 23344577777633211 1234789999997532 2
Q ss_pred CCcceEEEeEEcC
Q psy17207 82 PLEEFKIKYRKIP 94 (123)
Q Consensus 82 pi~~y~v~yr~~~ 94 (123)
.+..|.|+|+...
T Consensus 132 ~~~~Y~v~~~~~~ 144 (303)
T 1i1r_A 132 LETNFTLKSEWAT 144 (303)
T ss_dssp SCCEEEEEEEETT
T ss_pred CCcCEEEEEEecC
Confidence 3578999998753
No 203
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.44 E-value=1.4e-06 Score=61.03 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=51.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEeccC-CCceee-cCC-CCCCCCeEEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSGKP-NPAIFR-SHP-QGRLPNSYNITW 75 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~~P-~p~~~~-~~~-~~~~~~~~~L~w 75 (123)
.+|+.+..+ +....|+|.+++.+|+|.|.|.+.|..+.. ...+.|...+ .+|.+. ... ....+..+.|.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C 144 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGC 144 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEE
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEE
Confidence 479988753 456789999999999999999999986532 1234444322 233332 111 112567899999
Q ss_pred EeCCCCC
Q psy17207 76 MVSSYTP 82 (123)
Q Consensus 76 ~~~s~~p 82 (123)
.+.+..|
T Consensus 145 ~~~g~~P 151 (220)
T 2fbj_H 145 LIHDYFP 151 (220)
T ss_dssp EEEEEBS
T ss_pred EEEeEEC
Confidence 9876544
No 204
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.44 E-value=2e-06 Score=60.49 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=49.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecCCC--CCCCCeEEEEEEeCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~~p 82 (123)
.+.|.|.+++..|.|.|+|.|.|..|.....+.|. ..+.+|.+..... ...+..+.|.|.+.+.++
T Consensus 130 ~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~ 199 (262)
T 3rjd_A 130 NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQ 199 (262)
T ss_dssp CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC
T ss_pred CCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCC
Confidence 45799999999999999999999998888765554 3334454443221 125788999999988763
No 205
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.44 E-value=6.5e-07 Score=69.80 Aligned_cols=72 Identities=18% Similarity=0.136 Sum_probs=51.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc--CCCceeecC---CCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--PNPAIFRSH---PQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~--P~p~~~~~~---~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+.|.|.++..+|+|.|+|.|.|..|.....+.|... |........ .....+..+.|.|.+.+.++...+.|
T Consensus 272 ~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W 348 (524)
T 2ec8_A 272 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQW 348 (524)
T ss_dssp EEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEE
T ss_pred EEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEE
Confidence 5789999999999999999999999999887766543 222111111 11125778999999987766543553
No 206
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.43 E-value=2.5e-07 Score=63.25 Aligned_cols=68 Identities=19% Similarity=0.138 Sum_probs=41.5
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEE-EeccCCCc--eeecCCCCCCCCeEEEEEEeCCCCCC
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE-LSGKPNPA--IFRSHPQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~-l~~~P~p~--~~~~~~~~~~~~~~~L~w~~~s~~pi 83 (123)
..++|.|.+++.+|+|.|+|.|.|..|....... +...+.|. ...............+.+......|.
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~ 151 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPP 151 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSC
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCC
Confidence 3467999999999999999999998887665432 22222222 11222222245566667765444333
No 207
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.43 E-value=1.5e-07 Score=67.53 Aligned_cols=83 Identities=11% Similarity=0.049 Sum_probs=51.5
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecC-CCCCCCCeEEEEEEeCCCCCC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSH-PQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~-~~~~~~~~~~L~w~~~s~~pi 83 (123)
.++.+...+..+.|.|.+++..|+|.|+|.|.|..|.....+.|.. .|.+...... .....+..+.|.|.+.+..+.
T Consensus 40 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~ 119 (292)
T 4dkd_C 40 PHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLE 119 (292)
T ss_dssp SSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGG
T ss_pred CceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcc
Confidence 4555555566789999999999999999999999988877766654 3322111111 111256789999998763221
Q ss_pred cceEEE
Q psy17207 84 EEFKIK 89 (123)
Q Consensus 84 ~~y~v~ 89 (123)
..+.|.
T Consensus 120 ~~v~W~ 125 (292)
T 4dkd_C 120 AGVSLV 125 (292)
T ss_dssp SSEEEE
T ss_pred eeEEEE
Confidence 345543
No 208
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.43 E-value=8e-07 Score=58.15 Aligned_cols=48 Identities=25% Similarity=0.279 Sum_probs=39.4
Q ss_pred CCCEEEEEc---CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 6 d~R~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
.+|+.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.+.
T Consensus 70 ~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 70 RGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp TTSEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCceEEccccccCCeEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 468877642 236789999999999999999999999988887777654
No 209
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.43 E-value=3e-07 Score=59.24 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=36.7
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc-eeEEEEEEec
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG-KHRAYLELSG 52 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G-~~~~~i~l~~ 52 (123)
.++|..+..+| +|.|++++.+|+|.|+|.+.|..| ..++++.|..
T Consensus 62 ~~gR~~~~~ng---SL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V 107 (111)
T 2qsq_A 62 YSGREIIYPNA---SLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRV 107 (111)
T ss_dssp CCSCEEECTTS---CEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEE
T ss_pred cCCcEEEecCC---cEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEE
Confidence 35788887544 999999999999999999999977 4666666654
No 210
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.42 E-value=1.9e-06 Score=59.99 Aligned_cols=76 Identities=16% Similarity=0.242 Sum_probs=49.8
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC-----ceeEEEEEEec-cCCCceee--cCCCCCCCCeEEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM-----GKHRAYLELSG-KPNPAIFR--SHPQGRLPNSYNITW 75 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~-----G~~~~~i~l~~-~P~p~~~~--~~~~~~~~~~~~L~w 75 (123)
.+|+.+..+ .....|.|.+++.+|+|.|.|.+.|.. |.. ..+.|.. .+.+|.+. .......+..+.|.|
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C 145 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQG-TLVTVSSASPTSPKVFPLSLCSTQPDGNVVIAC 145 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCC-EEEEECSCCCBCCEEEEEECCSCCCTTEEEEEE
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCC-EEEEEecCCCCCCeEEEecCcccccCCCEEEEE
Confidence 479988643 456789999999999999999999863 221 2344442 23333332 111114578899999
Q ss_pred EeCCCCC
Q psy17207 76 MVSSYTP 82 (123)
Q Consensus 76 ~~~s~~p 82 (123)
.+.+..|
T Consensus 146 ~~~~~~P 152 (221)
T 3m8o_H 146 LVQGFFP 152 (221)
T ss_dssp EEEEEBS
T ss_pred EEEeeEC
Confidence 9987434
No 211
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.42 E-value=1.2e-06 Score=66.46 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=53.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-----e--eEEEEEEec-cCCCcee-ecCC--CCCCCCeEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----K--HRAYLELSG-KPNPAIF-RSHP--QGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~~~~i~l~~-~P~p~~~-~~~~--~~~~~~~~~ 72 (123)
.+|+.+... +....|.|.+++.+|+|.|+|.|.|..| . ....+.|.. .+.+|.+ ...+ ....+..+.
T Consensus 283 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~ 362 (438)
T 1qgc_4 283 KGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVT 362 (438)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEE
T ss_pred CCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEE
Confidence 478887653 4467899999999999999999999544 1 123444443 2233332 2211 112578999
Q ss_pred EEEEeCCCCCC-cceEE
Q psy17207 73 ITWMVSSYTPL-EEFKI 88 (123)
Q Consensus 73 L~w~~~s~~pi-~~y~v 88 (123)
|.|.+.+..|. ..+.|
T Consensus 363 L~C~~~g~~P~~~~v~W 379 (438)
T 1qgc_4 363 LGCLVKGYFPEPVTVTW 379 (438)
T ss_dssp EEEEEESCBSSCCEEEE
T ss_pred EEEEeccccCCCcEEEE
Confidence 99999876343 24443
No 212
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.42 E-value=3.6e-07 Score=65.48 Aligned_cols=48 Identities=33% Similarity=0.515 Sum_probs=40.4
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
|..++|+.+.. ....|.|.++..+|+|.|+|.|.|.+|.+.+++.|..
T Consensus 235 ~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 235 IEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp CCCTTTEEECS--TTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred CcCCccEEEcC--CccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence 45566776642 3468999999999999999999999999999988875
No 213
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.42 E-value=8.8e-07 Score=61.76 Aligned_cols=75 Identities=13% Similarity=0.232 Sum_probs=49.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce-----eEEEEEEec-cCCCce-eecCC--CCCCCCeEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK-----HRAYLELSG-KPNPAI-FRSHP--QGRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-----~~~~i~l~~-~P~p~~-~~~~~--~~~~~~~~~L~ 74 (123)
.+|+.+..+ +....|+|.+++.+|+|.|.|.+.|..|. ....+.|.. .|.+|. +...+ ....+..+.|.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 143 (215)
T 1c5d_H 64 KSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLG 143 (215)
T ss_dssp GGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEE
T ss_pred cCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEE
Confidence 468887643 34679999999999999999999997421 113445543 233333 22211 11246789999
Q ss_pred EEeCCC
Q psy17207 75 WMVSSY 80 (123)
Q Consensus 75 w~~~s~ 80 (123)
|.+.+.
T Consensus 144 C~~~g~ 149 (215)
T 1c5d_H 144 CLVKGY 149 (215)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 998765
No 214
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.42 E-value=9e-07 Score=64.21 Aligned_cols=81 Identities=14% Similarity=0.260 Sum_probs=50.1
Q ss_pred CCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcC-CceeEEEEEEec--cCCCceeecC--CCCCCCCeEEEEEEeCCC
Q psy17207 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNP-MGKHRAYLELSG--KPNPAIFRSH--PQGRLPNSYNITWMVSSY 80 (123)
Q Consensus 7 ~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~-~G~~~~~i~l~~--~P~p~~~~~~--~~~~~~~~~~L~w~~~s~ 80 (123)
+|+.+.. ....++|.|.+++.+|+|.|+|.|.|. .|.....+.+.. .|.++.+... ........+.|.|.+.++
T Consensus 62 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g 141 (308)
T 4fom_A 62 GRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATG 141 (308)
T ss_dssp TTEEESCCSSSBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEE
T ss_pred ceEEeeccCCCceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCC
Confidence 4555432 123467999999999999999999986 666666655543 3333322221 112246788899986544
Q ss_pred CCCcceE
Q psy17207 81 TPLEEFK 87 (123)
Q Consensus 81 ~pi~~y~ 87 (123)
.|...+.
T Consensus 142 ~P~~~i~ 148 (308)
T 4fom_A 142 KPVAHID 148 (308)
T ss_dssp BSCCEEE
T ss_pred cCCceEE
Confidence 4444444
No 215
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.41 E-value=8.8e-07 Score=62.53 Aligned_cols=82 Identities=16% Similarity=0.250 Sum_probs=50.3
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCc-----ee---EEEEEEec---cCCCceeec-CCCC---CCCC
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG-----KH---RAYLELSG---KPNPAIFRS-HPQG---RLPN 69 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----~~---~~~i~l~~---~P~p~~~~~-~~~~---~~~~ 69 (123)
.+|+.+.. ......|.|.+++.+|+|.|+|.|.|..| .. ...+.|.. .+.+|.+.. .+.. ..+.
T Consensus 61 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 140 (245)
T 3nfj_J 61 PQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQ 140 (245)
T ss_dssp CCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHS
T ss_pred CCcEEEEecCCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCC
Confidence 46887764 34577899999999999999999999433 11 11344443 223343321 1111 1257
Q ss_pred eEEEEEEeCCC-CCCcceE
Q psy17207 70 SYNITWMVSSY-TPLEEFK 87 (123)
Q Consensus 70 ~~~L~w~~~s~-~pi~~y~ 87 (123)
.+.|.|.+.+. +|...+.
T Consensus 141 ~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 141 KATLVCLATGFFPDHVELS 159 (245)
T ss_dssp EEEEEEEEEEEBSSCEEEE
T ss_pred ceEEEEEEccCcCCCEEEE
Confidence 89999998774 4333344
No 216
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.41 E-value=3.3e-07 Score=67.13 Aligned_cols=74 Identities=26% Similarity=0.411 Sum_probs=51.3
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--c-CCCceeecC-CC---CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--K-PNPAIFRSH-PQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~-P~p~~~~~~-~~---~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
....|.|.+++..|+|.|+|.|.|..|.....+.|.. . |.+|.+... +. ...+..+.|.|.+.+.++. .+.
T Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p-~v~- 255 (334)
T 1ry7_B 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-HIQ- 255 (334)
T ss_dssp TTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCE-EEE-
T ss_pred ceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCC-eEE-
Confidence 4568999999999999999999999999888766654 2 223333221 11 1246788999998776554 444
Q ss_pred EeE
Q psy17207 89 KYR 91 (123)
Q Consensus 89 ~yr 91 (123)
||+
T Consensus 256 W~~ 258 (334)
T 1ry7_B 256 WLK 258 (334)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 217
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.41 E-value=2.7e-06 Score=61.75 Aligned_cols=66 Identities=21% Similarity=0.333 Sum_probs=47.9
Q ss_pred EEEEEcccCCCCCeeEEEEEE-cCCceeE---EEEEEecc----CCCceeecCCC----CCCCCeEEEEEEeCCCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEAT-NPMGKHR---AYLELSGK----PNPAIFRSHPQ----GRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~-N~~G~~~---~~i~l~~~----P~p~~~~~~~~----~~~~~~~~L~w~~~s~~pi 83 (123)
+.|.|.+++..|+|.|+|.|. |..|... ..+.|... +.+|.+...+. ...+..+.|.|.+.+.++.
T Consensus 162 ~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p 239 (315)
T 1itb_B 162 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSD 239 (315)
T ss_dssp TEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTS
T ss_pred ceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCC
Confidence 489999999999999999999 8999883 34444322 45555543322 1257889999999876554
No 218
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.41 E-value=5.8e-07 Score=63.90 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=51.3
Q ss_pred CCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEeccCCCceeecCCCCCCCCeEEEEEEeC--CC
Q psy17207 7 ERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVS--SY 80 (123)
Q Consensus 7 ~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~--s~ 80 (123)
+|+.+.. ......|.|.+++.+|+|.|+|.|.|..+.. ...+.|...|.+|.... ...+..+.|.|.+. ..
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~---v~~G~~v~L~C~~~~~~~ 147 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLR---VRVGDTTQMRCSIQSTEE 147 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEE---EETTCCEEECCBCEESSS
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccc---cccCCcEEEEEEecCCCC
Confidence 5555531 1234689999999999999999999976654 34566665555443221 12467889999982 23
Q ss_pred CCCcceEEEeE
Q psy17207 81 TPLEEFKIKYR 91 (123)
Q Consensus 81 ~pi~~y~v~yr 91 (123)
.|...+. ||+
T Consensus 148 ~p~~~v~-W~~ 157 (268)
T 3mj6_A 148 KRVTKVN-WMF 157 (268)
T ss_dssp SCCCEEE-EEE
T ss_pred CCccceE-EEe
Confidence 3433454 344
No 219
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.40 E-value=9.6e-07 Score=62.08 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=48.8
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc------e--e---EEEEEEec-cCCCceee-cCC--CCCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG------K--H---RAYLELSG-KPNPAIFR-SHP--QGRLP 68 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G------~--~---~~~i~l~~-~P~p~~~~-~~~--~~~~~ 68 (123)
++|+.+..+ +....|.|.+++.+|+|.|.|.+.|..| . . ...+.|.. .+.+|.+. ..+ ....+
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g 145 (228)
T 3bae_H 66 ESRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTG 145 (228)
T ss_dssp GGGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CC
T ss_pred CCcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCC
Confidence 468887643 3467999999999999999999999765 1 1 12344443 23333322 211 11256
Q ss_pred CeEEEEEEeCCC
Q psy17207 69 NSYNITWMVSSY 80 (123)
Q Consensus 69 ~~~~L~w~~~s~ 80 (123)
..+.|.|.+.+.
T Consensus 146 ~~~~l~C~~~g~ 157 (228)
T 3bae_H 146 SSVTLGCLVKGY 157 (228)
T ss_dssp SEEEEEEEEEEE
T ss_pred CCEEEEEEEccE
Confidence 789999998765
No 220
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.40 E-value=2.8e-07 Score=68.78 Aligned_cols=70 Identities=20% Similarity=0.350 Sum_probs=47.9
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEEEeccCCCceeecCCC----CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~l~~~P~p~~~~~~~~----~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...|.|.+++..|+|.|+|.|.|..|.... ++.|.... +|.+...+. ...+..+.|.|.+.+.++.. +.|
T Consensus 269 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-v~W 343 (395)
T 1bih_A 269 GKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS-APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPN-VVW 343 (395)
T ss_dssp TSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE-EEEEEECCCSEEEECTTSCEEEECEEEEESCCC-CEE
T ss_pred CceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc-CCccccCCCcceEecCCCeEEEEEEECcccCCe-eEE
Confidence 348999999999999999999999999765 55444321 122222111 12567899999998765543 443
No 221
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.40 E-value=6.5e-07 Score=61.92 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=35.5
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
.|+.+...+..+.|.|.+++.+|+|.|+|.|.|.+|...+
T Consensus 156 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 156 GRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 5777766666789999999999999999999999999875
No 222
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.40 E-value=4.7e-07 Score=60.82 Aligned_cols=48 Identities=33% Similarity=0.515 Sum_probs=39.1
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
|..++++.+.. ..+.|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 139 ~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 139 IEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp CCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcCCCcEEEec--CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 45556776653 3468999999999999999999999999998877653
No 223
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.40 E-value=3.6e-06 Score=61.17 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=49.8
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCc-------eeEEEEEEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCCCcce
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMG-------KHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPLEEF 86 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~pi~~y 86 (123)
....|.|.+++.+|+|.|+|.|.|..+ ++...+.|.+.+.+|.+...+ ....++.+.|.|.+.+.++ .|
T Consensus 60 ~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~--~~ 137 (257)
T 1b6u_A 60 SKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYD--MY 137 (257)
T ss_dssp EEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCS--EE
T ss_pred ceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCc--EE
Confidence 356899999999999999999987532 223456666655555554322 1236789999999876543 45
Q ss_pred EEEeEE
Q psy17207 87 KIKYRK 92 (123)
Q Consensus 87 ~v~yr~ 92 (123)
. |||.
T Consensus 138 ~-w~k~ 142 (257)
T 1b6u_A 138 H-LSRE 142 (257)
T ss_dssp E-EEET
T ss_pred E-EEEC
Confidence 5 4543
No 224
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.39 E-value=5.6e-07 Score=67.21 Aligned_cols=70 Identities=20% Similarity=0.258 Sum_probs=49.9
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+.|.|.+++..|+|.|+|.|.|..|.....+.|.... +|.+...+. ...+..+.|.|.+.+.++.. +.|
T Consensus 274 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-v~W 346 (404)
T 3p3y_A 274 NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPT-VQW 346 (404)
T ss_dssp GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-EEEEEECCCCEEECTTCCEEEECEEEEESCCE-EEE
T ss_pred CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC-CCeeeccCCcceeecCCcEEEEEEccccCCCc-eEE
Confidence 45899999999999999999999999988877665422 122222111 12467899999998766553 443
No 225
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.39 E-value=1.3e-06 Score=63.75 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=49.9
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceeecC-CCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFRSH-PQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~-~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
+.|.|..+...|.|.|+|.|.|..|....++.|.. .|........ .....+..+.|.|.+.+.++...+.|
T Consensus 194 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W 267 (331)
T 3u83_A 194 SRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHW 267 (331)
T ss_dssp EEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEE
T ss_pred EEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEE
Confidence 57999999999999999999999999888776654 3321111111 11224688999999987766544553
No 226
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.38 E-value=7.5e-07 Score=65.72 Aligned_cols=72 Identities=17% Similarity=0.140 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC--CceeEEE----EEEe--ccCCC--ceeecC-CCCCCCCeEEEE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP--MGKHRAY----LELS--GKPNP--AIFRSH-PQGRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~~~----i~l~--~~P~p--~~~~~~-~~~~~~~~~~L~ 74 (123)
+.|+... .+.|.|.+++.+|+|.|+|.|.|. .|..... +.|. ..|.. +.+... .....+..+.|.
T Consensus 174 ~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~ 249 (329)
T 3oq3_B 174 GTKYSQS----GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANIT 249 (329)
T ss_dssp SSSEEEE----TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEE
T ss_pred CceEecC----CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEE
Confidence 4566554 268999999999999999999998 7665543 4444 33322 222111 011257789999
Q ss_pred EEeCCCC
Q psy17207 75 WMVSSYT 81 (123)
Q Consensus 75 w~~~s~~ 81 (123)
|.+.+.+
T Consensus 250 C~~~g~p 256 (329)
T 3oq3_B 250 CTAVSTS 256 (329)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9998776
No 227
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.38 E-value=1.8e-06 Score=60.77 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=47.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEec-cCCCceee-cCC--CCCCCCeEEEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSG-KPNPAIFR-SHP--QGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~-~P~p~~~~-~~~--~~~~~~~~~L~w~ 76 (123)
++|+.+..+ +....|+|++++.+|+|.|.|.+.|..+... ..+.|.. .+.+|.+. ..+ ....+..+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~ 144 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCL 144 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEE
Confidence 478888643 4577999999999999999999999643211 2344443 22333322 111 1124678999999
Q ss_pred eCCCCC
Q psy17207 77 VSSYTP 82 (123)
Q Consensus 77 ~~s~~p 82 (123)
+.+..|
T Consensus 145 ~~g~~P 150 (227)
T 1mju_H 145 VKGYFP 150 (227)
T ss_dssp EEEEBS
T ss_pred eecEeC
Confidence 876533
No 228
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.38 E-value=1e-06 Score=64.75 Aligned_cols=78 Identities=19% Similarity=0.201 Sum_probs=51.1
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc----eeEEEEEEec--cC--CCceeecCCC---CCCCCeEEEEE
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG----KHRAYLELSG--KP--NPAIFRSHPQ---GRLPNSYNITW 75 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G----~~~~~i~l~~--~P--~p~~~~~~~~---~~~~~~~~L~w 75 (123)
.|+.+.. ..+.|.|.+++..|+|.|+|.|.|..| .....+.|.. .+ .+|.+..... ...+..+.|.|
T Consensus 171 ~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C 248 (339)
T 3o4o_C 171 EKFLSVR--GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPC 248 (339)
T ss_dssp SSEEECT--TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCC
T ss_pred ceeEEcC--CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEE
Confidence 5666542 235899999999999999999999998 3444555443 22 2444443221 12467889999
Q ss_pred Ee---CCCCCCcce
Q psy17207 76 MV---SSYTPLEEF 86 (123)
Q Consensus 76 ~~---~s~~pi~~y 86 (123)
.+ .+.++...+
T Consensus 249 ~~~~~~g~P~~~~v 262 (339)
T 3o4o_C 249 KVFLGTGTPLTTML 262 (339)
T ss_dssp CEEESSSCCSSCEE
T ss_pred EEECCCCCCCCceE
Confidence 98 666634333
No 229
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.38 E-value=4.5e-07 Score=70.10 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=45.6
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeec--CCCCCCCCeEEEEEEeCCCCCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRS--HPQGRLPNSYNITWMVSSYTPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~--~~~~~~~~~~~L~w~~~s~~pi~~y~ 87 (123)
.+.|.|.+++.+|+|.|+|+|.|. ......+.|..+|....... ......+..+.|.|.+.+.++. .+.
T Consensus 289 ~~~L~I~~v~~~D~G~Y~C~A~N~-~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p-~i~ 359 (423)
T 3qs7_E 289 ILFAFVSSVARNDTGYYTCSSSKH-PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI-RCT 359 (423)
T ss_dssp EEEEEESSCCTTTCEEEEEEETTE-EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCC-EEE
T ss_pred EEEEEEeecCHHHCEEEEEEEecC-CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC-eEE
Confidence 357999999999999999999999 44445555554432111110 0111246788999999887764 344
No 230
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.38 E-value=1.5e-06 Score=66.78 Aligned_cols=77 Identities=14% Similarity=0.264 Sum_probs=51.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc------------e--eEEEEEEecc-CCCce-eecC--CCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG------------K--HRAYLELSGK-PNPAI-FRSH--PQG 65 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G------------~--~~~~i~l~~~-P~p~~-~~~~--~~~ 65 (123)
++|+.+..+ +....|.|.+++.+|+|.|+|.|.|..| . ....+.|... +.+|. +... ...
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 478888653 4577999999999999999999999876 1 1234444432 22333 2221 112
Q ss_pred CCCCeEEEEEEeCCCCC
Q psy17207 66 RLPNSYNITWMVSSYTP 82 (123)
Q Consensus 66 ~~~~~~~L~w~~~s~~p 82 (123)
..+..+.|.|.+.+..|
T Consensus 145 ~~g~~v~L~C~~~g~~P 161 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYFP 161 (457)
T ss_dssp CTTCCEEEEEEEESBBS
T ss_pred cCCCcEEEEEEEeEEeC
Confidence 35788999999877644
No 231
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.38 E-value=1.6e-06 Score=61.32 Aligned_cols=77 Identities=12% Similarity=0.189 Sum_probs=49.8
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCc---e----eEEEEEEecc---CCCceee-cCCC---CCCCCe
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG---K----HRAYLELSGK---PNPAIFR-SHPQ---GRLPNS 70 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~----~~~~i~l~~~---P~p~~~~-~~~~---~~~~~~ 70 (123)
.+|+.+.. .+....|.|.+++.+|+|.|.|.+.|..| . ....+.|... +.+|.+. ..+. ...+..
T Consensus 59 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 138 (238)
T 1bec_A 59 PDGYKASRPSQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQK 138 (238)
T ss_dssp CTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCS
T ss_pred cceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCc
Confidence 47888764 24567999999999999999999999742 1 1123445432 2344433 2111 114678
Q ss_pred EEEEEEeCCCCC
Q psy17207 71 YNITWMVSSYTP 82 (123)
Q Consensus 71 ~~L~w~~~s~~p 82 (123)
+.|.|.+.+..|
T Consensus 139 ~~L~C~~~g~~P 150 (238)
T 1bec_A 139 ATLVCLARGFFP 150 (238)
T ss_dssp CSEEEEEEEEBS
T ss_pred eEEEEEEeeEeC
Confidence 899999876533
No 232
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.37 E-value=4.6e-07 Score=57.22 Aligned_cols=47 Identities=17% Similarity=0.335 Sum_probs=37.9
Q ss_pred CCCEEEEEc---CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+|+.+... ....+|+|.+++.+|+|.|+|.+.|..|.....+.|..
T Consensus 74 ~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V 123 (126)
T 1eaj_A 74 KGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 123 (126)
T ss_dssp TTTEEECCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCeeEEEcccccCCeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEE
Confidence 467776532 23467999999999999999999999998888877764
No 233
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.37 E-value=4.8e-07 Score=61.67 Aligned_cols=37 Identities=22% Similarity=0.428 Sum_probs=34.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
.+.|.|.+++.+|+|.|+|.|.|.+|....++.|...
T Consensus 175 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 175 SPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp SSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 4589999999999999999999999999999888765
No 234
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.37 E-value=3.4e-07 Score=69.05 Aligned_cols=47 Identities=40% Similarity=0.375 Sum_probs=39.5
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+. .+.|.|.++..+|+|.|+|+|.|.+|.+.++..|.+
T Consensus 335 ~l~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V 381 (384)
T 3kld_A 335 PLLTRDRIQIE----QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV 381 (384)
T ss_dssp ECCCBTTEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCccEEEe----CCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEE
Confidence 35566788764 248999999999999999999999999999887764
No 235
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.37 E-value=3.7e-07 Score=59.55 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=38.2
Q ss_pred CCCEEEEEc---CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..|..+... ....+|+|.+++.+|+|.|+|.+.|..|..+++++|.+
T Consensus 69 ~~R~~~~~~~~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 69 RGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp TTCEEECTTTGGGTBCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cceEEEecCCccCCeEEEEECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 356665422 12457999999999999999999999999999998874
No 236
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.37 E-value=2.6e-06 Score=62.24 Aligned_cols=88 Identities=10% Similarity=0.142 Sum_probs=54.1
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCC-cee--E----EEEEEecc-----------C--CCceeecCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM-GKH--R----AYLELSGK-----------P--NPAIFRSHP 63 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G~~--~----~~i~l~~~-----------P--~p~~~~~~~ 63 (123)
++|+.+.. .+...+|+|.+++.+|+|.|+|.+.|.. |.. . ..+.|... | .++.+...+
T Consensus 87 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p 166 (291)
T 2gki_A 87 KGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP 166 (291)
T ss_dssp BTTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC
T ss_pred CCCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC
Confidence 47887764 2456799999999999999999999985 211 1 13333331 1 122222111
Q ss_pred C---CCCCCeEEEEEEeCCCCCCc----ceEEEeEEc
Q psy17207 64 Q---GRLPNSYNITWMVSSYTPLE----EFKIKYRKI 93 (123)
Q Consensus 64 ~---~~~~~~~~L~w~~~s~~pi~----~y~v~yr~~ 93 (123)
. ...+..+.|.|.+.+.++.. -...|||..
T Consensus 167 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~ 203 (291)
T 2gki_A 167 SSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQK 203 (291)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEEC
T ss_pred CEEEEcCCCcEEEEEEcCCccccccccceeEEEEEEC
Confidence 1 12578999999987665432 145577774
No 237
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.36 E-value=6.8e-07 Score=60.42 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=43.6
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...|.|.+++.+|+|.|+|.|.|..|.....+ ...+.++.. ....+..+.|.|.+.+.+ ...+.|
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~l~V--~~~~~~~~~----~v~~g~~~~l~C~~~~~p-~~~v~W 131 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEEVQLLV--FGLTANSDT----HLLQGQSLTLTLESPPGS-SPSVQC 131 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEEEEEEE--EEEEESSCS----EEETTCCEEEEEECCTTC-CCEEEE
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCcEEEEE--EEecCCCCc----eeecCCCEEEEEEcCCCC-CCEEEE
Confidence 45699999999999999999999977554433 322211111 112467899999997764 334553
No 238
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.36 E-value=8.3e-07 Score=70.10 Aligned_cols=80 Identities=15% Similarity=0.124 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-EEEEEE--eccCCCceeecCCCC--CCCCeEEEEEEeCCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-RAYLEL--SGKPNPAIFRSHPQG--RLPNSYNITWMVSSY 80 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~i~l--~~~P~p~~~~~~~~~--~~~~~~~L~w~~~s~ 80 (123)
+.|+.+..+ ++|.|.+++.+|+|.|+|.+.|..|.. ...+.| ...|.+|.+...... .....+.|.|.+.+.
T Consensus 423 ~~r~~~~~~---~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~ 499 (581)
T 3o3u_N 423 DSVARVLPN---GSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGS 499 (581)
T ss_dssp GGTSEECTT---SCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEE
T ss_pred CCcEEEcCC---ceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCC
Confidence 346666433 379999999999999999999999988 554444 455666655432221 123445679998764
Q ss_pred CCCcceEE
Q psy17207 81 TPLEEFKI 88 (123)
Q Consensus 81 ~pi~~y~v 88 (123)
.|...+.|
T Consensus 500 ~P~~~i~W 507 (581)
T 3o3u_N 500 YPAGTLSW 507 (581)
T ss_dssp BSCCEEEE
T ss_pred CCCCeEEE
Confidence 23334443
No 239
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.36 E-value=2.4e-06 Score=61.38 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=49.2
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCcee----EEEEEEeccCCCceeecCCC--CCCCCeEEEEEEeCCCCCCcceEEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH----RAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFKIK 89 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~----~~~i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~~pi~~y~v~ 89 (123)
....|.|.+++.+|+|.|+|.+.|..|.. ...+.|.+.+.+|.+...+. ...++.+.|.|.+...++ .|. |
T Consensus 58 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~--~~~-w 134 (242)
T 1p6f_A 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MFL-L 134 (242)
T ss_dssp CEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCS--EEE-E
T ss_pred ceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCC--EEE-E
Confidence 46789999999999999999999876532 23455555433444432221 125789999999876543 444 4
Q ss_pred eEE
Q psy17207 90 YRK 92 (123)
Q Consensus 90 yr~ 92 (123)
|+.
T Consensus 135 ~k~ 137 (242)
T 1p6f_A 135 LKE 137 (242)
T ss_dssp EEC
T ss_pred EEC
Confidence 553
No 240
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.36 E-value=5.8e-07 Score=69.36 Aligned_cols=43 Identities=28% Similarity=0.378 Sum_probs=36.2
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.|+.+... ++|.|.+++.+|+|.|+|+|.|..|.+.+++.+..
T Consensus 389 ~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v 431 (440)
T 3zyj_A 389 VRIAVLSD---GTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431 (440)
T ss_dssp SSEEECTT---CCEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceEEEccC---CeEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 46665433 46999999999999999999999999999877764
No 241
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.36 E-value=7.5e-07 Score=66.61 Aligned_cols=69 Identities=25% Similarity=0.277 Sum_probs=48.8
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC---CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP---QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~---~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
+.|.|.++..+|+|.|+|.|.|..|.....+.|.... ||.+...+ ....+..+.|.|.+.+.++. .+.|
T Consensus 275 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~v~W 346 (403)
T 3laf_A 275 SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV-PPWFLNHPSNLYAYESMDIEFECAVSGKPVP-TVNW 346 (403)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECCCCEECCTTCCEEECCEEEEESCC-EEEE
T ss_pred cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC-CCcEeecCcceEEecCCeEEEEEEEeeccCC-EEEE
Confidence 4799999999999999999999999998876665421 12222111 11246789999998876554 3443
No 242
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.36 E-value=1.3e-06 Score=61.61 Aligned_cols=76 Identities=13% Similarity=0.187 Sum_probs=48.8
Q ss_pred CCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCcee------EEEEEEec---cCCCceee-cCCCC---CCCCeEE
Q psy17207 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKH------RAYLELSG---KPNPAIFR-SHPQG---RLPNSYN 72 (123)
Q Consensus 7 ~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~------~~~i~l~~---~P~p~~~~-~~~~~---~~~~~~~ 72 (123)
+|+.+.. .+....|.|.+++.+|+|.|+|.|.|..+.. ...+.|.. .+.+|.+. ..+.. ..+..+.
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~ 144 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 144 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEE
Confidence 6887764 3457799999999999999999999875421 12344443 22334332 21111 1257899
Q ss_pred EEEEeCCCCC
Q psy17207 73 ITWMVSSYTP 82 (123)
Q Consensus 73 L~w~~~s~~p 82 (123)
|.|.+.+.+|
T Consensus 145 L~C~~~g~~p 154 (246)
T 4dzb_B 145 LVCLATGFYP 154 (246)
T ss_dssp EEEEEEEEBS
T ss_pred EEEEEccCcC
Confidence 9999876544
No 243
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.35 E-value=1.8e-06 Score=59.95 Aligned_cols=71 Identities=11% Similarity=-0.059 Sum_probs=41.5
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEE-EEEecc-CCCcee-ecCCC---CCCCCeEEEEEEeCCCC-CCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELSGK-PNPAIF-RSHPQ---GRLPNSYNITWMVSSYT-PLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-i~l~~~-P~p~~~-~~~~~---~~~~~~~~L~w~~~s~~-pi~~y~v 88 (123)
..|.|.+++.+|+|.|+|.|.|..+..... +.|... +.++.+ ..... ...+..+.|.|.+.+.+ +...+.|
T Consensus 64 ~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W 141 (213)
T 2x1w_L 64 KGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNW 141 (213)
T ss_dssp TEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEE
T ss_pred ccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEE
Confidence 469999999999999999999965544332 444331 222222 22111 12578899999987643 2233454
No 244
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.35 E-value=9.3e-07 Score=63.31 Aligned_cols=81 Identities=17% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcC--CceeE--EEEEEec---cCCCceee-cCCCC---CCCCeEEEE
Q psy17207 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNP--MGKHR--AYLELSG---KPNPAIFR-SHPQG---RLPNSYNIT 74 (123)
Q Consensus 7 ~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~--~~i~l~~---~P~p~~~~-~~~~~---~~~~~~~L~ 74 (123)
+|+.+.. .+....|.|.+++.+|+|.|+|.+.|. .+... ..+.|.. .+.+|.+. ..+.. ..+..+.|.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~ 167 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLV 167 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEE
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEE
Confidence 7888874 244678999999999999999999984 22221 1344443 22233322 21111 125789999
Q ss_pred EEeCCCCCC-cceE
Q psy17207 75 WMVSSYTPL-EEFK 87 (123)
Q Consensus 75 w~~~s~~pi-~~y~ 87 (123)
|.+.+.+|. ..+.
T Consensus 168 C~~~g~~p~~~~v~ 181 (268)
T 3pl6_D 168 CLATGFYPDHVELS 181 (268)
T ss_dssp EEEEEEBSSCEEEE
T ss_pred EEECcccCCCeEEE
Confidence 998775443 2444
No 245
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.35 E-value=2.4e-06 Score=66.55 Aligned_cols=64 Identities=11% Similarity=0.205 Sum_probs=46.1
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC----CCCCCeEEEEEEeCCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ----GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~----~~~~~~~~L~w~~~s~~p 82 (123)
+.|.|.++...| |.|+|.|.|..|.......|.....|..+...+. ...+..+.|.|.+.+.+|
T Consensus 281 s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p 348 (523)
T 2rcj_C 281 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSH 348 (523)
T ss_pred EEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccC
Confidence 589999999999 9999999999999877666653222332222211 124778999999987654
No 246
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.35 E-value=1.6e-06 Score=61.86 Aligned_cols=78 Identities=12% Similarity=0.212 Sum_probs=47.6
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCcee---E--EEEEEeccCC--------------CceeecCCC---CCCCCeEEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH---R--AYLELSGKPN--------------PAIFRSHPQ---GRLPNSYNI 73 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~---~--~~i~l~~~P~--------------p~~~~~~~~---~~~~~~~~L 73 (123)
....|.|.+++.+|+|.|.|.|.|..|.. . ..+.|...+. ++.+...+. ...+..+.|
T Consensus 77 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 156 (259)
T 3omz_A 77 KNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTL 156 (259)
T ss_dssp CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEE
T ss_pred CeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEE
Confidence 45579999999999999999999987631 1 1234443211 122222221 125789999
Q ss_pred EEEeCCCCCCcceEEEeEEcC
Q psy17207 74 TWMVSSYTPLEEFKIKYRKIP 94 (123)
Q Consensus 74 ~w~~~s~~pi~~y~v~yr~~~ 94 (123)
.|.+.+..|.. ...|||...
T Consensus 157 ~C~~~~~~~~~-~v~W~k~~~ 176 (259)
T 3omz_A 157 NCLYETSWWSY-YIFWYKRLP 176 (259)
T ss_dssp CCEEECCCSSC-EEEEEEECT
T ss_pred EEECCCccCCc-eEEEeeeCC
Confidence 99876643432 345677653
No 247
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.34 E-value=3e-07 Score=58.21 Aligned_cols=51 Identities=25% Similarity=0.331 Sum_probs=38.2
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEeccCCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELSGKPNP 56 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~~~P~p 56 (123)
++|+.+.. .....+|+|.+++.+|+|.|.|.+.|..+.. ...+.|.+.|.+
T Consensus 59 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p~~ 113 (116)
T 2or8_A 59 SSRYNLKGHISEGDVSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFSLQVKPEL 113 (116)
T ss_dssp STTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCSSTTCCEEEEEEEEEECSC
T ss_pred CCeEEEecCCCCCeEEEEECCCCcccCEEEEEEEEcCCcccccEEEEEEEECCcc
Confidence 56777632 2345689999999999999999999976543 667777776543
No 248
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.34 E-value=7.2e-07 Score=62.03 Aligned_cols=36 Identities=28% Similarity=0.320 Sum_probs=32.6
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|+|.+++.+|+|.|+|.|.|..|....++.|..
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 205 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 205 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEE
Confidence 457999999999999999999999999998877765
No 249
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.34 E-value=1.5e-06 Score=62.94 Aligned_cols=77 Identities=13% Similarity=0.235 Sum_probs=49.4
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCc----e----eEEEEEEecc---CCCceeecC-CCC---CCCC
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG----K----HRAYLELSGK---PNPAIFRSH-PQG---RLPN 69 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G----~----~~~~i~l~~~---P~p~~~~~~-~~~---~~~~ 69 (123)
++|+.+.. .+....|.|.+++.+|+|.|+|.|.|..| . ....+.|... +.+|.+... +.. ..+.
T Consensus 87 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 166 (279)
T 2wbj_D 87 KDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQ 166 (279)
T ss_dssp SSSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHS
T ss_pred CCcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCC
Confidence 47898875 35577999999999999999999999432 0 1123444431 234443321 111 0256
Q ss_pred eEEEEEEeCCCCC
Q psy17207 70 SYNITWMVSSYTP 82 (123)
Q Consensus 70 ~~~L~w~~~s~~p 82 (123)
.+.|.|.+.+..|
T Consensus 167 ~v~L~C~~~g~~P 179 (279)
T 2wbj_D 167 KATLVCLATGFYP 179 (279)
T ss_dssp CCEEEEEEEEEBS
T ss_pred ceEEEEEEeeEcC
Confidence 7899999876544
No 250
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.33 E-value=4.3e-07 Score=65.26 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=40.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCce---eEEEEEEecc-CCCceeecCC-----CCCCCCeEEEEEEeCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGK---HRAYLELSGK-PNPAIFRSHP-----QGRLPNSYNITWMVSS 79 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~---~~~~i~l~~~-P~p~~~~~~~-----~~~~~~~~~L~w~~~s 79 (123)
.+.|.|.+++.+|+|.|+|.|.|..|. ...++.|... |..+...... ....+..+.|.|.+..
T Consensus 50 ~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~ 121 (289)
T 3mjg_X 50 SSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTD 121 (289)
T ss_dssp EEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSC
T ss_pred eEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCC
Confidence 478999999999999999999999987 4456666553 3332221110 1124678899998873
No 251
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.33 E-value=2e-06 Score=65.56 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=47.0
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE----------EEEEEecc-CCCceeecCCCCCCCCeEEEEEEeCCCCC
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR----------AYLELSGK-PNPAIFRSHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----------~~i~l~~~-P~p~~~~~~~~~~~~~~~~L~w~~~s~~p 82 (123)
..+.|.|.++...|.|.|+|.|.|.+|... ..+.+... +.+|.+........+..+.|.|.+.+..|
T Consensus 140 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P 217 (450)
T 1z7z_I 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFP 217 (450)
T ss_dssp EEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTT
T ss_pred cceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCC
Confidence 356899999999999999999999988633 22333333 34454432222235789999999988856
No 252
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.33 E-value=1.2e-06 Score=65.25 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=34.1
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..++|+|.+++.+|+|.|+|+|.|.+|.+..++.|..
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 343 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 343 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECS
T ss_pred cceEEEECCCCcccCceEEEEEecCCCceeeEEEEEe
Confidence 3678999999999999999999999999999988875
No 253
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.31 E-value=7e-07 Score=65.40 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=35.1
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCc
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~ 57 (123)
+.|.|.+++..|+|.|+|.|.|.+|....++.|...+.|+
T Consensus 291 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 291 EVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp CCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred cEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 4799999999999999999999999999988887654443
No 254
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.31 E-value=4.7e-07 Score=56.01 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=28.7
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE-EEEEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR-AYLEL 50 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~~i~l 50 (123)
.+.|.|.+++..|+|.|+|.|.|.+|... ..+.|
T Consensus 75 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l 109 (112)
T 3so5_A 75 TTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXL 109 (112)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred ceEEEEeccccccCCeEEEEEEeCCCcEEEeEEEE
Confidence 47899999999999999999999999843 44444
No 255
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.31 E-value=1.1e-06 Score=55.21 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+...+....|+|.+++.+|+|.|.|.|.|..
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 59 PSRFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEY 94 (108)
T ss_dssp CTTEEEEESSSEEEEEECSCCTTCCSEEEEEECSSS
T ss_pred CceEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 479988766677899999999999999999999963
No 256
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.30 E-value=7.8e-07 Score=56.67 Aligned_cols=51 Identities=20% Similarity=0.241 Sum_probs=33.7
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce--eEEEEEEeccCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK--HRAYLELSGKPNP 56 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--~~~~i~l~~~P~p 56 (123)
.+|+.+... ....+|+|.+++.+|+|.|+|.+.|..|. ....+.|.+.+.|
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 67 KERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp TTCEEECCBGGGTBCCEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred cCcEEEecCCcCCeEEEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 467776521 23568999999999999999999998875 3556666654433
No 257
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.30 E-value=4.4e-07 Score=62.05 Aligned_cols=48 Identities=31% Similarity=0.558 Sum_probs=38.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEEEe
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS 51 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~l~ 51 (123)
+|..++|+.+... .+.|.|.++...|+|.|+|.|.|.+|...+ .+.|.
T Consensus 149 ~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 149 SLQLTERMTLSQN--NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp ECCCCSSEEEETT--TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEEC
T ss_pred eCCCCCCeEEcCC--CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeee
Confidence 3456678877643 368999999999999999999999999886 34554
No 258
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.29 E-value=7.2e-07 Score=61.69 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=44.7
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEE--EEEeccCCCceeecCCC--CCCCCeEEEEEEe-CCCCCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSGKPNPAIFRSHPQ--GRLPNSYNITWMV-SSYTPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~-~s~~pi~~y~ 87 (123)
...|.|.+++.+|+|.|+|.+.|. |..... +.|...+.+|.+..... ...+..+.|.|.+ .+.++ ..+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~-~~v~ 144 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPE-AEVF 144 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSC-CEEE
T ss_pred eEEEEECCcccccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCC-CeEE
Confidence 567999999999999999999986 333333 34444444455443221 1246889999998 44443 3344
No 259
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.29 E-value=1.1e-06 Score=64.76 Aligned_cols=62 Identities=24% Similarity=0.343 Sum_probs=38.3
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCC-cee---EEEEEEec--cCC---CceeecCC-----CCCCCCeEEEEEEeCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPM-GKH---RAYLELSG--KPN---PAIFRSHP-----QGRLPNSYNITWMVSS 79 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~-G~~---~~~i~l~~--~P~---p~~~~~~~-----~~~~~~~~~L~w~~~s 79 (123)
..|.|.+++.+|+|.|+|.|.|.. |.. ...+.|.. .+. +|.+.... ....+..+.|.|.+.+
T Consensus 177 ~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~ 252 (349)
T 4dep_C 177 MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYF 252 (349)
T ss_dssp TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEE
T ss_pred CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEE
Confidence 579999999999999999999997 665 45555543 221 44443322 1124677889999874
No 260
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.29 E-value=1.1e-06 Score=65.53 Aligned_cols=73 Identities=19% Similarity=0.176 Sum_probs=50.6
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCCCcceEEEeE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEFKIKYR 91 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi~~y~v~yr 91 (123)
....|.|.+++..|+|.|+|.|.|..|.....+.|.... +|.+...+. ...+..+.|.|.+.+.++.. +. ||+
T Consensus 255 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-v~-W~~ 330 (382)
T 1cs6_A 255 SEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA-QPDWLDVITDTEADIGSDLRWSCVASGKPRPA-VR-WLR 330 (382)
T ss_dssp SSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECCCCEEEETTCCEEEECEEEEESCCE-EE-EEE
T ss_pred CCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec-CCCcccCCCccEEcCCCeEEEEEEeeeecCCE-EE-EEE
Confidence 346899999999999999999999999988876665421 122221111 12467899999987766553 44 344
No 261
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.28 E-value=1.4e-06 Score=57.03 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=32.9
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCCcee
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPMGKH 44 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~ 44 (123)
.+||.+. ..+....|+|.+++.+|+|.|.|.+.|..+..
T Consensus 61 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~ 101 (129)
T 3rrq_A 61 DCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKL 101 (129)
T ss_dssp -CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGGC
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCCc
Confidence 3699887 34567899999999999999999999988765
No 262
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.28 E-value=1.6e-06 Score=62.29 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=33.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..+.|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 250 ~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 286 (290)
T 2o26_X 250 RQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKV 286 (290)
T ss_dssp EEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEE
Confidence 3568999999999999999999999999999888765
No 263
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.28 E-value=1.3e-06 Score=55.12 Aligned_cols=49 Identities=20% Similarity=0.319 Sum_probs=36.4
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCC-c---eeEEEEEEeccC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM-G---KHRAYLELSGKP 54 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~-G---~~~~~i~l~~~P 54 (123)
++|+.+.. ......|+|++++.+|+|.|.|.+.+.. | .....+.|.+.|
T Consensus 54 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 54 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp ETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred cCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecCccCccCCccEEEEEEEec
Confidence 47888863 3446789999999999999999999986 5 233455665554
No 264
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.28 E-value=9.6e-07 Score=59.25 Aligned_cols=79 Identities=15% Similarity=0.142 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE--EE--EEeccCCCceeec--CCCCCCCCeEEEEEEeCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA--YL--ELSGKPNPAIFRS--HPQGRLPNSYNITWMVSS 79 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~i--~l~~~P~p~~~~~--~~~~~~~~~~~L~w~~~s 79 (123)
+.|+.+... +.|.|.+++..|+|.|+|.|.|..+.... .+ .+...|....... ......+..+.|.|.+.+
T Consensus 48 ~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g 124 (189)
T 2v5t_A 48 DNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASG 124 (189)
T ss_dssp CTTEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEE
T ss_pred CCeEEEecC---CCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEcc
Confidence 456666432 47999999999999999999999855432 23 3333322110000 001124778999999876
Q ss_pred CCCCcceEE
Q psy17207 80 YTPLEEFKI 88 (123)
Q Consensus 80 ~~pi~~y~v 88 (123)
.++. .+.|
T Consensus 125 ~p~~-~v~W 132 (189)
T 2v5t_A 125 SPEP-AISW 132 (189)
T ss_dssp ESCC-EEEE
T ss_pred CCCC-eEEE
Confidence 6444 4443
No 265
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.27 E-value=7.5e-07 Score=63.29 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=35.1
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCcee
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIF 59 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~ 59 (123)
..+.|.|.+++.+|+|.|+|.|.|..|....++.|.....+|.+
T Consensus 199 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~ 242 (268)
T 3mj6_A 199 NDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC----
T ss_pred CeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCee
Confidence 35689999999999999999999999999998888764444433
No 266
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.27 E-value=1.2e-06 Score=60.95 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=47.8
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccC------------CCceeecCCC---CCCCCeEEEEEEe
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKP------------NPAIFRSHPQ---GRLPNSYNITWMV 77 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P------------~p~~~~~~~~---~~~~~~~~L~w~~ 77 (123)
..+.|.|.+++..|+|.|+|.|.|..|... ..+.|...| .++.+...+. ...+..+.|.|.+
T Consensus 63 ~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~ 142 (218)
T 3k0w_A 63 NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA 142 (218)
T ss_dssp CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEE
T ss_pred CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEe
Confidence 356899999999999999999999998653 345554432 1123322211 1246789999999
Q ss_pred CCCCCCcceEE
Q psy17207 78 SSYTPLEEFKI 88 (123)
Q Consensus 78 ~s~~pi~~y~v 88 (123)
.+.++. .|.|
T Consensus 143 ~g~p~~-~v~W 152 (218)
T 3k0w_A 143 VGSPIP-HYQW 152 (218)
T ss_dssp EBSSCC-EEEE
T ss_pred cccCCC-eEEE
Confidence 776554 3443
No 267
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.26 E-value=2.5e-06 Score=67.83 Aligned_cols=65 Identities=9% Similarity=0.054 Sum_probs=45.8
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+.|.|.+++.+|+|.|+|+|.|.+|....++.|... .+|.+..... ...|.|.+.+.++. .+.|
T Consensus 377 ~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~-~~P~i~~~~~-----~~~l~C~a~g~P~p-~i~W 441 (527)
T 3qs9_E 377 GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-RKPQVLAEAS-----ASQASCFSDGYPLP-SWTW 441 (527)
T ss_dssp SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---CCCEEEECCC-----CE---EEEECSSCC-EEEE
T ss_pred CcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe-cCCeEEEeCC-----CCEEEEEEEEEcCC-eEEE
Confidence 4589999999999999999999999999998887754 3445543221 23579999887665 4443
No 268
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.26 E-value=3.5e-06 Score=59.24 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=46.8
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce--------eE--EEEEEe-ccCCCceee-cCC--CCCCCCe
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK--------HR--AYLELS-GKPNPAIFR-SHP--QGRLPNS 70 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~--------~~--~~i~l~-~~P~p~~~~-~~~--~~~~~~~ 70 (123)
+|+.+..+ .....|.|.+++.+|+|.|.|.+.|..|. .. ..+.|. ..+.+|.+. ..+ ....+..
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 149 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 149 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CE
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCc
Confidence 68888643 35678999999999999999999986311 11 134443 233344333 111 1124678
Q ss_pred EEEEEEeCCCCC
Q psy17207 71 YNITWMVSSYTP 82 (123)
Q Consensus 71 ~~L~w~~~s~~p 82 (123)
+.|.|.+.+..|
T Consensus 150 v~L~C~~~~~~P 161 (232)
T 3qhz_H 150 AALGCLVKDYFP 161 (232)
T ss_dssp EEEEEEEEEEBS
T ss_pred EEEEEEEeeEeC
Confidence 999999876444
No 269
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.26 E-value=7.4e-06 Score=63.38 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=53.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce------e--EEEEEEec-cCCCceee-cCC-CCCCCCeEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK------H--RAYLELSG-KPNPAIFR-SHP-QGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~------~--~~~i~l~~-~P~p~~~~-~~~-~~~~~~~~~ 72 (123)
.+|+.+..+ +....|.|.+++.+|+|.|.|.|.|..|. . ...+.|.. .+.+|.+. ... ....+..+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~ 145 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVV 145 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEE
Confidence 468887643 35678999999999999999999998762 1 12344442 23333322 211 113578899
Q ss_pred EEEEeCCCCCC--cceEE
Q psy17207 73 ITWMVSSYTPL--EEFKI 88 (123)
Q Consensus 73 L~w~~~s~~pi--~~y~v 88 (123)
|.|.+.+..|. ..+.|
T Consensus 146 L~C~~~g~~P~~p~~v~W 163 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTW 163 (475)
T ss_pred EEEEEeeecCCCceEEEE
Confidence 99999876443 24444
No 270
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.26 E-value=1e-06 Score=65.70 Aligned_cols=47 Identities=32% Similarity=0.363 Sum_probs=39.2
Q ss_pred ccccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+. .+.|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 334 ~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 334 PLASQNRIEVS----GGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380 (382)
T ss_dssp ECCCCSSEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCCceEEEE----CCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEE
Confidence 34556777764 248999999999999999999999999999887764
No 271
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.25 E-value=1.9e-06 Score=64.42 Aligned_cols=47 Identities=28% Similarity=0.288 Sum_probs=39.2
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+..++++.+.. .+.|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 353 ~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 399 (403)
T 3laf_A 353 VIPSDYFQIVG---GSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIV 399 (403)
T ss_dssp CCCSSSEEEET---TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCCCCcEEEec---CccEEEeccccccCEEEEEEEEcCCceEEEEEEEEE
Confidence 34556666653 357999999999999999999999999999988875
No 272
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.25 E-value=4.2e-06 Score=60.63 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=48.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEec-cCCCceee-cCC--CCCCCCeEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG-KPNPAIFR-SHP--QGRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~-~P~p~~~~-~~~--~~~~~~~~~L~ 74 (123)
++|+.+..+ .....|+|.+++.+|+|.|.|.+.|..+.. ...+.|.. .+.+|.+. ..+ ....+..+.|.
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~ 150 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 150 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEE
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEE
Confidence 478888643 356789999999999999999999964311 12344443 22333322 111 11246789999
Q ss_pred EEeCCC
Q psy17207 75 WMVSSY 80 (123)
Q Consensus 75 w~~~s~ 80 (123)
|.+.+.
T Consensus 151 C~~~g~ 156 (261)
T 2xqy_G 151 CLVKGY 156 (261)
T ss_dssp EEEEEE
T ss_pred EEEEeE
Confidence 998764
No 273
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.25 E-value=1.6e-06 Score=68.97 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=42.5
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi 83 (123)
..+|.|.+++.+|+|.|+|.|.|..|.....+.|...|.+......+ .......+.|.|.+.++|+.
T Consensus 102 ~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P 169 (527)
T 3qs9_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEP 169 (527)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCC
T ss_pred EEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecCC
Confidence 34699999999999999999999999988877776543221111000 00123445689998887654
No 274
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.24 E-value=3.2e-06 Score=62.29 Aligned_cols=60 Identities=22% Similarity=0.167 Sum_probs=42.1
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecC------CCCCCCCeEEEEEEe
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSH------PQGRLPNSYNITWMV 77 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~------~~~~~~~~~~L~w~~ 77 (123)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.....+..+... .....+..+.|.|.+
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 144 (349)
T 4dep_C 79 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPN 144 (349)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCS
T ss_pred CEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCC
Confidence 489999999999999999999999998877666543222111110 011246778999974
No 275
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.24 E-value=4e-06 Score=56.33 Aligned_cols=71 Identities=17% Similarity=0.303 Sum_probs=45.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCCcceEEEeE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v~yr 91 (123)
...|.|. +..|+|.|+|.|.|.. .....+.|...|.............+..+.|.|.+.+.++...+. ||+
T Consensus 50 ~~~l~i~--~~~d~G~Y~C~~~n~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~-W~~ 120 (184)
T 3b5h_A 50 KTEFKVD--SDDQWGEYSCVFLPEP-MGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWA-WYK 120 (184)
T ss_dssp EEEEEEC--GGGCCEEEEEEEESTT-SCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEE-EEE
T ss_pred cEEEEEe--chhhCeEEEEEEECCc-CcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEE-EEE
Confidence 4467777 6899999999999943 355566666555432211111122578899999998877444555 444
No 276
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.24 E-value=1.8e-06 Score=57.38 Aligned_cols=70 Identities=11% Similarity=0.082 Sum_probs=48.5
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...|.|.+++..|+|.|+|.|.|..+.....+.|...| ....... ....+..+.|.|.+.+..|...|.|
T Consensus 50 ~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~--~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 120 (170)
T 3ry4_A 50 TQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEW--LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTF 120 (170)
T ss_dssp CSSEEEEECCGGGCEEEEEEETTSBCCCCEEEEEECCS--EEEECSCSEECTTCCEEEEEEEGGGCCEEEEEE
T ss_pred ccceEEEecccccCeEEEEEEeCCCceEeEEEEEECCc--eEecCCCceeecCCeEEEEEECCCCCCCceEEE
Confidence 34578889999999999999999887777777666532 2222111 1125778999999976666555554
No 277
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.23 E-value=5.3e-07 Score=57.35 Aligned_cols=47 Identities=30% Similarity=0.403 Sum_probs=34.2
Q ss_pred ccccCCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 2 RLETTERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 2 ~l~~d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|..++|+.+. ..+..+.|.|.+++.+|+|.|+|.+ |.....+.|..
T Consensus 53 ~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V 100 (115)
T 2cr6_A 53 PLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRV 100 (115)
T ss_dssp EECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEE
T ss_pred ECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEE
Confidence 35566777775 3466778999999999999999994 45554444443
No 278
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.23 E-value=3.6e-06 Score=60.16 Aligned_cols=77 Identities=16% Similarity=0.233 Sum_probs=48.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC----ceeE--EEEEEe-ccCCCceee-cCC--CCCCCCeEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM----GKHR--AYLELS-GKPNPAIFR-SHP--QGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~----G~~~--~~i~l~-~~P~p~~~~-~~~--~~~~~~~~~L 73 (123)
.+|+.+..+ .....|+|++++.+|+|.|.|.+.|.. +... ..+.|. ..+.+|.+. ..+ ....+..+.|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (253)
T 3liz_H 65 KGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 144 (253)
T ss_dssp TTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEE
Confidence 478888643 356779999999999999999999862 2211 234444 233344332 111 1124788999
Q ss_pred EEEeCCCCC
Q psy17207 74 TWMVSSYTP 82 (123)
Q Consensus 74 ~w~~~s~~p 82 (123)
.|.+.+..|
T Consensus 145 ~C~~~g~~P 153 (253)
T 3liz_H 145 GCLVKGYFP 153 (253)
T ss_dssp EEEEEEEBS
T ss_pred EEEEeeEeC
Confidence 999977333
No 279
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.23 E-value=1.7e-06 Score=59.53 Aligned_cols=42 Identities=29% Similarity=0.422 Sum_probs=34.4
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEE
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLE 49 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~ 49 (123)
.++|+.+... +.|.|.+++.+|+|.|+|.|.|.+|....++.
T Consensus 160 ~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 201 (217)
T 2vr9_A 160 ASSRVRIVDG---GNLLISNVEPIDEGNYKCIAQNLVGTRESSYA 201 (217)
T ss_dssp CCCSEEEETT---TEEEESSCCSTTCEEEEEEEEETTEEEECCCE
T ss_pred cCCcEEecCC---CcEEEeeCCHHHCeEEEEEEEcccceeccccE
Confidence 4566666533 47999999999999999999999999987543
No 280
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.23 E-value=5.1e-06 Score=67.99 Aligned_cols=79 Identities=22% Similarity=0.206 Sum_probs=53.2
Q ss_pred cccCCCEEEEE----c-CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC--CCCCCCeEEEEE
Q psy17207 3 LETTERRIMET----R-GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP--QGRLPNSYNITW 75 (123)
Q Consensus 3 l~~d~R~~i~~----~-~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~--~~~~~~~~~L~w 75 (123)
|..++|+.+.. . ...+.|.|.++...|+|.|+|.|.|..|....++.|.....| .+.... ....+..+.|.|
T Consensus 470 l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-~~~~~~~~~v~~G~~v~l~C 548 (816)
T 3dmk_A 470 IANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLP-YIRQMEKKAIVAGETLIVTC 548 (816)
T ss_dssp CCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSC-EECCCCCEEEETTCCEEEEC
T ss_pred CCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCC-eeEccCCeEEecCCeEEEEE
Confidence 44556776531 1 223579999999999999999999999999887776643222 221111 112477889999
Q ss_pred EeCCCCC
Q psy17207 76 MVSSYTP 82 (123)
Q Consensus 76 ~~~s~~p 82 (123)
.+.+.++
T Consensus 549 ~~~g~p~ 555 (816)
T 3dmk_A 549 PVAGYPI 555 (816)
T ss_dssp CEECSSE
T ss_pred EecCCCC
Confidence 8877543
No 281
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.23 E-value=4.9e-06 Score=58.82 Aligned_cols=77 Identities=14% Similarity=0.263 Sum_probs=46.8
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEE--cCCce------eEEEEEEec-cCCCceee-cC-C-CCCCC-Ce
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEAT--NPMGK------HRAYLELSG-KPNPAIFR-SH-P-QGRLP-NS 70 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~--N~~G~------~~~~i~l~~-~P~p~~~~-~~-~-~~~~~-~~ 70 (123)
++|+.+..+ +....|+|++++.+|+|.|.|.+. |..|. ....+.|.. .+.+|.+. .. . ....+ ..
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~ 143 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSS 143 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCS
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCc
Confidence 479988643 456799999999999999999999 43121 112444544 23334322 11 1 11235 78
Q ss_pred EEEEEEeCCCCC
Q psy17207 71 YNITWMVSSYTP 82 (123)
Q Consensus 71 ~~L~w~~~s~~p 82 (123)
+.|.|.+.+..|
T Consensus 144 v~L~C~~~g~~P 155 (232)
T 1dn0_B 144 VAVGCLAQDFLP 155 (232)
T ss_dssp EEEEEEEEEEBS
T ss_pred EEEEEEEEEEeC
Confidence 999999876533
No 282
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.23 E-value=2.6e-06 Score=59.92 Aligned_cols=70 Identities=10% Similarity=0.039 Sum_probs=49.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCC-CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...|.|.+++..|+|.|+|.|.|..+.....+.+...| ....... ....+..+.|.|.+....|...+.|
T Consensus 47 ~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~--~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W 117 (262)
T 3rjd_A 47 TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGW--LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLY 117 (262)
T ss_dssp SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSS--EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEE
T ss_pred CCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccc--eEecCCCeEEecCCeEEEEEEccCCCCCceEEE
Confidence 46799999999999999999999998887777666432 2111111 1125778999999965555555553
No 283
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=98.23 E-value=5.1e-06 Score=58.49 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=51.2
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC-----ceeE-----EEEEEec-cCCCceee-cCC--CCCCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM-----GKHR-----AYLELSG-KPNPAIFR-SHP--QGRLPN 69 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~-----G~~~-----~~i~l~~-~P~p~~~~-~~~--~~~~~~ 69 (123)
.+|+.+..+ .....|+|.+++.+|+|.|.|.+.+.. +... ..+.|.. .+.+|.+. ..+ ....+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGG 144 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTC
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCC
Confidence 479988643 346679999999999999999999864 1111 1344432 22333332 111 122568
Q ss_pred eEEEEEEeCCCCC-CcceEE
Q psy17207 70 SYNITWMVSSYTP-LEEFKI 88 (123)
Q Consensus 70 ~~~L~w~~~s~~p-i~~y~v 88 (123)
.+.|.|.+.+..| ...+.|
T Consensus 145 ~v~L~C~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 145 TAALGCLVKDYFPEPVTVSW 164 (230)
T ss_dssp EEEEEEEEEEEBSSCCEEEE
T ss_pred CEEEEEEEEeEECCCEEEEE
Confidence 8999999876434 333443
No 284
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.22 E-value=3.3e-06 Score=59.45 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=47.3
Q ss_pred CCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcCC----ceeE--EEEEEec---cCCCceee-cCCCC---CCCCeEE
Q psy17207 7 ERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNPM----GKHR--AYLELSG---KPNPAIFR-SHPQG---RLPNSYN 72 (123)
Q Consensus 7 ~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~----G~~~--~~i~l~~---~P~p~~~~-~~~~~---~~~~~~~ 72 (123)
+|+.+... .....|.|.+++.+|+|.|.|.+.+.. +... ..+.|.. .+.+|.+. ..+.. ..+..+.
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~ 143 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceE
Confidence 78888753 446789999999999999999999632 1211 2344443 22333322 21111 1257899
Q ss_pred EEEEeCCCCC
Q psy17207 73 ITWMVSSYTP 82 (123)
Q Consensus 73 L~w~~~s~~p 82 (123)
|.|.+.+.+|
T Consensus 144 l~C~~~g~~p 153 (245)
T 4ei6_B 144 LVCLATGFYP 153 (245)
T ss_dssp EEEEEEEEBS
T ss_pred EEEEEeeEeC
Confidence 9999876444
No 285
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.22 E-value=1.7e-06 Score=61.98 Aligned_cols=43 Identities=30% Similarity=0.458 Sum_probs=36.2
Q ss_pred CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 8 R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
|+.+. ...+.|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 246 ~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 288 (291)
T 1qz1_A 246 KHIFS--DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 288 (291)
T ss_dssp SEEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceEEc--CCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEE
Confidence 55554 33468999999999999999999999999998887764
No 286
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.22 E-value=3.3e-06 Score=61.54 Aligned_cols=64 Identities=17% Similarity=0.093 Sum_probs=42.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEE-cCCceeEEEEEEeccCCC--ceeecCCCCCCCCeEEEEEEeCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEAT-NPMGKHRAYLELSGKPNP--AIFRSHPQGRLPNSYNITWMVSSY 80 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~-N~~G~~~~~i~l~~~P~p--~~~~~~~~~~~~~~~~L~w~~~s~ 80 (123)
..+|.|.+++.+|+|.|+|.|. +..|.....+.|.....| +...............+.|.+.+.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~ 144 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGG 144 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEE
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCc
Confidence 4579999999999999999875 567777777777643222 222222222245666777876543
No 287
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.22 E-value=5.5e-06 Score=63.32 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=49.9
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCcee-----EEEEEEec-cCCCc-eeecCC--CCCCCCeEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKH-----RAYLELSG-KPNPA-IFRSHP--QGRLPNSYNIT 74 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-----~~~i~l~~-~P~p~-~~~~~~--~~~~~~~~~L~ 74 (123)
.+|+.+..+ +....|.|.+++.+|+|.|.|.|.|..|.. ...+.|.. .+.+| .+...+ ....+..+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 144 (444)
T 1igt_B 65 KGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 144 (444)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEE
Confidence 468888643 456799999999999999999999986652 12344442 22233 332211 11357889999
Q ss_pred EEeCCC
Q psy17207 75 WMVSSY 80 (123)
Q Consensus 75 w~~~s~ 80 (123)
|.+.+.
T Consensus 145 C~~~g~ 150 (444)
T 1igt_B 145 CLVKGY 150 (444)
T ss_dssp EEEEEE
T ss_pred EEEcce
Confidence 998765
No 288
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.22 E-value=1.6e-06 Score=59.82 Aligned_cols=40 Identities=25% Similarity=0.405 Sum_probs=32.5
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCc
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPA 57 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~ 57 (123)
+.|.|.++...|+|.|+|.|.|.+|....++.|.. .|.+|
T Consensus 185 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 185 EVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226 (231)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred cEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCC
Confidence 57999999999999999999999999988776654 45443
No 289
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.21 E-value=1.5e-06 Score=54.47 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=36.0
Q ss_pred CCCEEEEEcC-----CEEEEEEcccCCCCCeeEEEEEEc-CCceeEEEEEEec
Q psy17207 6 TERRIMETRG-----SRHTLMIRKVVASDFGNYSCEATN-PMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~-----~~~~L~I~~v~~~D~G~YtC~A~N-~~G~~~~~i~l~~ 52 (123)
.+|+.+.... ...+|+|.+++.+|+|.|+|.+.| ..|.....+.|..
T Consensus 62 ~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V 114 (118)
T 3udw_C 62 SKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 (118)
T ss_dssp CSSEEETTCCTTSCCCBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCcEEEecccccCCCCCcEEEEeecChHHCeEEEEEEEECCCCCccceEEEEE
Confidence 4566664321 156899999999999999999999 7887777766654
No 290
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.21 E-value=5.6e-07 Score=62.06 Aligned_cols=68 Identities=13% Similarity=0.074 Sum_probs=43.0
Q ss_pred EEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceee-cCCCCCCCCeEEEEEEe-CCCCCCcceEE
Q psy17207 20 LMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFR-SHPQGRLPNSYNITWMV-SSYTPLEEFKI 88 (123)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~-~~~~~~~~~~~~L~w~~-~s~~pi~~y~v 88 (123)
|.|.+++..|+|.|+|.|.|..|... ..+.|...|...... .......+..+.|.|.+ .+.++. .|.|
T Consensus 71 l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~-~v~W 143 (217)
T 2vr9_A 71 RTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP-TLIW 143 (217)
T ss_dssp SCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC-EEEE
T ss_pred EEeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC-eEEE
Confidence 47899999999999999999999874 345554433221111 11111246788999988 555443 3443
No 291
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.21 E-value=2.9e-06 Score=61.51 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=44.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCce---------e--E----EEEEEec-cCCCceeec-CC--C
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGK---------H--R----AYLELSG-KPNPAIFRS-HP--Q 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~---------~--~----~~i~l~~-~P~p~~~~~-~~--~ 64 (123)
.+|+.+..+ .....|+|.+++.+|+|.|.|.+.|..|. . . ..+.|.. .+.+|.+.. .+ .
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~ 144 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSK 144 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC---
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCccc
Confidence 478988753 45678999999999999999999998751 1 1 1344443 223343321 11 1
Q ss_pred CCCCCeEEEEEEeCCC
Q psy17207 65 GRLPNSYNITWMVSSY 80 (123)
Q Consensus 65 ~~~~~~~~L~w~~~s~ 80 (123)
...+..+.|.|.+.+.
T Consensus 145 ~~~g~~v~L~C~~~g~ 160 (257)
T 3bn9_D 145 STSGGTAALGCLVKDY 160 (257)
T ss_dssp --------CCCEEEEE
T ss_pred ccCCCcEEEEEEEeeE
Confidence 1245678899998764
No 292
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.21 E-value=1.3e-06 Score=58.82 Aligned_cols=46 Identities=28% Similarity=0.460 Sum_probs=35.3
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEEEe
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS 51 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~l~ 51 (123)
+..+.|+.+... +.|.|.++..+|+|.|+|.|.|.+|.... .+.|.
T Consensus 141 ~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 187 (192)
T 2iep_A 141 LRENSRIAVLES---GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLE 187 (192)
T ss_dssp CCCCSSEEECTT---SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred ccCCCcEEEecC---CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 445567766433 37999999999999999999999998854 34443
No 293
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.21 E-value=6.5e-06 Score=58.34 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=48.8
Q ss_pred cCCCEEEEEcC--CEEEEEEcccCCCCCeeEEEEEEcCC---c--ee----EEEEEEeccC-------CCceeecCCCC-
Q psy17207 5 TTERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNPM---G--KH----RAYLELSGKP-------NPAIFRSHPQG- 65 (123)
Q Consensus 5 ~d~R~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~---G--~~----~~~i~l~~~P-------~p~~~~~~~~~- 65 (123)
.++|+.+.... ....|+|.+++.+|+|.|.|.+.|.. + .. ...+.|...| .+..+......
T Consensus 65 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~ 144 (242)
T 1hxm_B 65 PSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAET 144 (242)
T ss_dssp CTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGG
T ss_pred cCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhc
Confidence 45899886432 47799999999999999999999863 1 11 1234454432 22222110011
Q ss_pred CCCCeEEEEEEeCCCCC
Q psy17207 66 RLPNSYNITWMVSSYTP 82 (123)
Q Consensus 66 ~~~~~~~L~w~~~s~~p 82 (123)
..+..+.|.|.+.+..|
T Consensus 145 ~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp GSSSCEEEEEEEEEESS
T ss_pred ccCCCceEEEEEeeEEC
Confidence 13678999999876544
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.21 E-value=1.4e-06 Score=67.41 Aligned_cols=43 Identities=33% Similarity=0.349 Sum_probs=36.2
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.|+.+... ++|.|.+++.+|+|.|+|+|.|..|.+.+++.|.+
T Consensus 399 ~~~~~~~~---g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 441 (452)
T 3zyi_A 399 PRISVLND---GTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNV 441 (452)
T ss_dssp SSCEECTT---SCEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC
T ss_pred CCEEECCC---CeEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEE
Confidence 36655433 47999999999999999999999999999887764
No 295
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.20 E-value=2.6e-06 Score=61.09 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=32.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..+.|.|.+++.+|+|.|+|.|.|.+|....++.|..
T Consensus 240 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 276 (289)
T 3mjg_X 240 IRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINI 276 (289)
T ss_dssp EEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEE
Confidence 3578999999999999999999999999998766653
No 296
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.20 E-value=3.2e-06 Score=62.68 Aligned_cols=72 Identities=21% Similarity=0.273 Sum_probs=50.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEE--EEeccCCCceeecCCCCCCCCeEEEEEEeCC-CCCCcceEEEeEEc
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYL--ELSGKPNPAIFRSHPQGRLPNSYNITWMVSS-YTPLEEFKIKYRKI 93 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i--~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s-~~pi~~y~v~yr~~ 93 (123)
+.|.|.+++..|+|.|+|.+ .|...+.+ .|..+|.+|.+.... ......+.+.|..+. ..+...|.++|++.
T Consensus 60 ~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V~~pP~~P~l~c~~-~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~ 134 (325)
T 1n26_A 60 RRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVDVPPEEPQLSCFR-KSPLSNVVCEWGPRSTPSLTTKAVLLVRKF 134 (325)
T ss_dssp SEEEECSCCGGGCEEEEEES---SSSCSCEEEEEECCCCCCCCCEEEB-SSTTSCEEEEECCSSCCCTTCEEEEEEEEE
T ss_pred ceEEecccchhhCeEeEEEe---CCEEeeeEEEEeccCCCCCceeEEe-ecCCCcEEEEECCCCCCCCCceEEEEEEEc
Confidence 58999999999999999993 66665554 444577776633211 123568999999743 22447899999875
No 297
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.18 E-value=2.5e-06 Score=59.52 Aligned_cols=37 Identities=32% Similarity=0.367 Sum_probs=33.5
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
..+.|.|.++..+|+|.|+|.|.|.+|....++.|..
T Consensus 180 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 216 (241)
T 3grw_A 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSV 216 (241)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC
T ss_pred CceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEe
Confidence 3568999999999999999999999999999887764
No 298
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.18 E-value=1.2e-06 Score=63.56 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=31.6
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
...|.|.+++.+|+|.|+|.|+|.+|.+..++.|..
T Consensus 263 ~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V 298 (308)
T 4fom_A 263 NTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYI 298 (308)
T ss_dssp TEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCE
T ss_pred CeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEE
Confidence 456789999999999999999999999998877654
No 299
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.17 E-value=1.3e-05 Score=58.53 Aligned_cols=73 Identities=14% Similarity=0.286 Sum_probs=46.7
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCc-----e--eEEEEEEeccCCCceeecCCC--CCCCCeEEEEEEeCCCCCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMG-----K--HRAYLELSGKPNPAIFRSHPQ--GRLPNSYNITWMVSSYTPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G-----~--~~~~i~l~~~P~p~~~~~~~~--~~~~~~~~L~w~~~s~~pi~~y~ 87 (123)
.+.|.|.+++.+|+|.|+|.|.|..+ . ....+.|.+.+.+|.+...+. ...+..+.|.|.+...++ .|.
T Consensus 73 ~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~--~~~ 150 (316)
T 3vh8_G 73 QESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFE--HFF 150 (316)
T ss_dssp SSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCS--EEE
T ss_pred eEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCc--EEE
Confidence 46799999999999999999997432 2 223455555444454442211 125788999999854333 444
Q ss_pred EEeEE
Q psy17207 88 IKYRK 92 (123)
Q Consensus 88 v~yr~ 92 (123)
||+.
T Consensus 151 -w~k~ 154 (316)
T 3vh8_G 151 -LHKE 154 (316)
T ss_dssp -EEET
T ss_pred -EEEC
Confidence 4443
No 300
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.17 E-value=2.8e-06 Score=58.14 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=29.8
Q ss_pred EEEEEEcc-cCCCCCeeEEEEEEcCCceeEEEEEEe
Q psy17207 17 RHTLMIRK-VVASDFGNYSCEATNPMGKHRAYLELS 51 (123)
Q Consensus 17 ~~~L~I~~-v~~~D~G~YtC~A~N~~G~~~~~i~l~ 51 (123)
..+|.|.+ ++.+|+|.|+|+|.|..|.....+.+.
T Consensus 43 ~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 43 DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 45899999 999999999999999999966655443
No 301
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.17 E-value=5.5e-06 Score=60.38 Aligned_cols=82 Identities=23% Similarity=0.257 Sum_probs=50.6
Q ss_pred cCCCEEEE-EcCCEEEEEEcccCCCCCeeEEEE-EEcCCceeEEEEEEec--cCCCceeecCCC--CCCC---CeEEEEE
Q psy17207 5 TTERRIME-TRGSRHTLMIRKVVASDFGNYSCE-ATNPMGKHRAYLELSG--KPNPAIFRSHPQ--GRLP---NSYNITW 75 (123)
Q Consensus 5 ~d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~-A~N~~G~~~~~i~l~~--~P~p~~~~~~~~--~~~~---~~~~L~w 75 (123)
.++|+.+. .....+.|.|.+++.+|+|.|+|. +.|..|.....+.|.. .|.......... ...+ +.+.|.|
T Consensus 78 ~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C 157 (331)
T 3u83_A 78 YRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATC 157 (331)
T ss_dssp CTTTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEE
T ss_pred cCCceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEE
Confidence 34677664 223456799999999999999997 7787888877666654 332211111110 0122 6799999
Q ss_pred E-eCCCCCCcceE
Q psy17207 76 M-VSSYTPLEEFK 87 (123)
Q Consensus 76 ~-~~s~~pi~~y~ 87 (123)
. ..+.++ ..+.
T Consensus 158 ~~~~~~p~-~~i~ 169 (331)
T 3u83_A 158 TSANGKPP-SVVS 169 (331)
T ss_dssp EEEEEBSC-CEEE
T ss_pred EecCCcCC-ceEE
Confidence 8 555443 3444
No 302
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.17 E-value=7.8e-06 Score=57.43 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=47.1
Q ss_pred CCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCc---eeE--EEEEEec---cCCCceeec-CCCC---CCCCeEEE
Q psy17207 7 ERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMG---KHR--AYLELSG---KPNPAIFRS-HPQG---RLPNSYNI 73 (123)
Q Consensus 7 ~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~~~--~~i~l~~---~P~p~~~~~-~~~~---~~~~~~~L 73 (123)
+|+.+.. ......|.|.+++.+|+|.|+|.+.+..+ ... ..+.|.. .+.+|.+.. .+.. ..+..+.|
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L 142 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATL 142 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEE
Confidence 6888765 34567899999999999999999983211 111 2344443 233443332 1111 12578999
Q ss_pred EEEeCCCCC
Q psy17207 74 TWMVSSYTP 82 (123)
Q Consensus 74 ~w~~~s~~p 82 (123)
.|.+.+..|
T Consensus 143 ~C~~~g~~P 151 (240)
T 3q5y_A 143 VCLARGFFP 151 (240)
T ss_dssp EEEEEEEBS
T ss_pred EEEEeeEEC
Confidence 999877433
No 303
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.14 E-value=1.3e-06 Score=60.66 Aligned_cols=70 Identities=11% Similarity=0.170 Sum_probs=45.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEe-ccCCCceeecCCC---CCCCCeEEEEEEeCCC-CCCcceE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELS-GKPNPAIFRSHPQ---GRLPNSYNITWMVSSY-TPLEEFK 87 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~-~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~-~pi~~y~ 87 (123)
+.|.|.+++.+|.|.|+|.|.|..|.. +..+.+. ....+|.+..... ...+..+.|.|.+.+. ++...+.
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 144 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVE 144 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEE
Confidence 579999999999999999999999864 3455431 2233443321111 1136789999998774 4423444
No 304
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.13 E-value=3.3e-06 Score=58.94 Aligned_cols=37 Identities=27% Similarity=0.245 Sum_probs=31.5
Q ss_pred cCCCEEEEEc---CCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 5 TTERRIMETR---GSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 5 ~d~R~~i~~~---~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.++|+.+..+ .....|+|.+++.+|+|.|.|.+.|..
T Consensus 55 ~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (207)
T 1ypz_E 55 ENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWH 94 (207)
T ss_dssp EETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBC
T ss_pred cCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 3578988754 567799999999999999999999874
No 305
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.13 E-value=2.1e-06 Score=54.54 Aligned_cols=51 Identities=25% Similarity=0.301 Sum_probs=38.1
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p 56 (123)
++||.+.. .....+|+|++++.+|+|.|.|.+.+........+.|...|.+
T Consensus 60 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~~ 112 (115)
T 2or7_A 60 NSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPEL 112 (115)
T ss_dssp STTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCTTSCEEEEEEEEEESCC
T ss_pred CccEEEecCccCCeEEEEEccCCHHHCEEEEEEEECCCceeEEEEEEEEcCCC
Confidence 46777642 2235579999999999999999999876555777777765543
No 306
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.13 E-value=1.4e-06 Score=54.08 Aligned_cols=45 Identities=27% Similarity=0.419 Sum_probs=33.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l 50 (123)
++|+.+... ....+|+|.+++.+|+|.|.|.+.|..|.....+.|
T Consensus 58 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l 104 (109)
T 2oyp_A 58 SSRYQLKGDLNKGDVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLEL 104 (109)
T ss_dssp CTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEECCSSTTCCEEEEE
T ss_pred cceEEEccCccCCcEeEEEccCCChhCeEEEEEEEcCCcccceEEEE
Confidence 467766421 234689999999999999999999987665555444
No 307
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.13 E-value=1.3e-06 Score=61.20 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=45.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEE-eccCCCceeec-CCC--CCCCCeEEEEEEeCC-CCCCcceE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKH--RAYLEL-SGKPNPAIFRS-HPQ--GRLPNSYNITWMVSS-YTPLEEFK 87 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l-~~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s-~~pi~~y~ 87 (123)
+.|.|.+++.+|.|.|+|.|.|..|.. ...+.+ .....+|.+.. ... ...+..+.|.|.+.+ +++...+.
T Consensus 76 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 152 (218)
T 2rgs_A 76 STLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVE 152 (218)
T ss_dssp EEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEE
Confidence 579999999999999999999998764 344432 12233443321 111 123678999999987 44433444
No 308
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.13 E-value=2.3e-06 Score=51.99 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=26.6
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (123)
.+.|.|.+++.+|+|.|+|.|.|..|...
T Consensus 49 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 49 KKLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 45899999999999999999999999765
No 309
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.12 E-value=8e-06 Score=57.94 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=47.7
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-----------eeE----EEEEEe-ccCCCceee-cCC--C
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----------KHR----AYLELS-GKPNPAIFR-SHP--Q 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----------~~~----~~i~l~-~~P~p~~~~-~~~--~ 64 (123)
.+|+.+..+ .....|+|.+++.+|+|.|.|.+.+..| ... ..+.|. ..+.+|.+. ..+ .
T Consensus 72 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~ 151 (239)
T 3tv3_H 72 KSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSK 151 (239)
T ss_dssp GGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCC
T ss_pred cCCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChh
Confidence 368887643 4567899999999999999999987632 111 123343 223334333 111 1
Q ss_pred CCCCCeEEEEEEeCCCCC
Q psy17207 65 GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 65 ~~~~~~~~L~w~~~s~~p 82 (123)
...+..+.|.|.+.+..|
T Consensus 152 ~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFP 169 (239)
T ss_dssp C--TTEEEEEEEEEEEBS
T ss_pred hccCCcEEEEEEEeeEeC
Confidence 124688999999876433
No 310
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.12 E-value=1.7e-06 Score=56.42 Aligned_cols=30 Identities=30% Similarity=0.579 Sum_probs=27.5
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (123)
..+.|.|.+++.+|+|.|+|.|.|.+|.+.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 88 AASTISIDTLVEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECCTTSSS
T ss_pred cceEEEECCCCcccCEEEEEEEEecCCccc
Confidence 357899999999999999999999999874
No 311
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.12 E-value=2.8e-06 Score=57.95 Aligned_cols=68 Identities=16% Similarity=0.088 Sum_probs=41.3
Q ss_pred EEEcccCCCCCeeEEEEEEcCCceeE---EEEEEeccCCCceee-cCCCCCCCCeEEEEEEe-CCCCCCcceEE
Q psy17207 20 LMIRKVVASDFGNYSCEATNPMGKHR---AYLELSGKPNPAIFR-SHPQGRLPNSYNITWMV-SSYTPLEEFKI 88 (123)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~---~~i~l~~~P~p~~~~-~~~~~~~~~~~~L~w~~-~s~~pi~~y~v 88 (123)
|.|.+++..|+|.|+|.|.|..|... ..+.|...|...... .......+..+.|.|.+ .+.++. .|.|
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~v~W 146 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP-TISW 146 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCC-EEEE
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCC-EEEE
Confidence 45567899999999999999999773 234444433221111 10111246788999987 454443 4443
No 312
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.12 E-value=3.2e-06 Score=53.27 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+++...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 61 PSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEeccCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 57998876666789999999999999999999984
No 313
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.12 E-value=1e-05 Score=58.61 Aligned_cols=83 Identities=14% Similarity=0.183 Sum_probs=48.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc------eeE----EEEEEec-cCCCceee-cCC--CCCCCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG------KHR----AYLELSG-KPNPAIFR-SHP--QGRLPN 69 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G------~~~----~~i~l~~-~P~p~~~~-~~~--~~~~~~ 69 (123)
.+|+++..+ .....|+|++++.+|+|.|.|.+.+..+ ... ..+.|.. .+.+|.+. ..+ ....+.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~ 143 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSG 143 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCC
Confidence 479988643 3567899999999999999999998641 111 1334432 23333332 111 112467
Q ss_pred eEEEEEEeCCCCCC-cceEE
Q psy17207 70 SYNITWMVSSYTPL-EEFKI 88 (123)
Q Consensus 70 ~~~L~w~~~s~~pi-~~y~v 88 (123)
.+.|.|.+.+..|- ..+.|
T Consensus 144 ~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 144 TAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEEEEEEEEBSSCCEEEE
T ss_pred cEEEEEEEEeEeCCceEEEE
Confidence 88999998765442 34444
No 314
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.11 E-value=9.7e-06 Score=58.16 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=29.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+++..+ .....|+|.+++.+|+|.|.|.+.|.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 100 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAG 100 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCC
Confidence 478988643 45778999999999999999999984
No 315
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.11 E-value=7.4e-06 Score=58.39 Aligned_cols=76 Identities=12% Similarity=0.230 Sum_probs=48.5
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCC------ceeEEEEEEec---cCCCceeecC-CCC---CCCCeE
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPM------GKHRAYLELSG---KPNPAIFRSH-PQG---RLPNSY 71 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~------G~~~~~i~l~~---~P~p~~~~~~-~~~---~~~~~~ 71 (123)
.+|+.+.. ......|.|.+++.+|+|.|.|.+.|.. |.. ..+.|.. .+.+|.+... +.. ..+..+
T Consensus 63 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~-~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~ 141 (252)
T 1oga_E 63 AEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPG-TRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKA 141 (252)
T ss_dssp CTTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCC-EEEEEESCGGGCBCCEEEEECCCHHHHHHHSEE
T ss_pred CCcEEEEecCCCEEEEEECcCChhhCEEEEEEEecCCccceeECCC-EEEEEecccCCCCCCeEEEECCChhhhccCCce
Confidence 46888753 2345689999999999999999999961 222 2344443 2345544321 111 025789
Q ss_pred EEEEEeCCCCC
Q psy17207 72 NITWMVSSYTP 82 (123)
Q Consensus 72 ~L~w~~~s~~p 82 (123)
.|.|.+.+..|
T Consensus 142 ~L~C~~~g~~P 152 (252)
T 1oga_E 142 TLVCLATGFYP 152 (252)
T ss_dssp EEEEEEEEEBS
T ss_pred EEEEEEeeEcC
Confidence 99999876533
No 316
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.11 E-value=5.5e-06 Score=61.68 Aligned_cols=66 Identities=18% Similarity=0.132 Sum_probs=43.3
Q ss_pred EEEEEEcccCCCC------CeeEEEEEEcCCceeE-EEEEE--eccCCCceeecCCCCCCCCeEEEEEEeCCCCC
Q psy17207 17 RHTLMIRKVVASD------FGNYSCEATNPMGKHR-AYLEL--SGKPNPAIFRSHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 17 ~~~L~I~~v~~~D------~G~YtC~A~N~~G~~~-~~i~l--~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~p 82 (123)
.+.|.|.+++..| +|.|+|.|.|..|... ..+.| ...|.............+..+.|.|.+.+.++
T Consensus 58 ~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 132 (388)
T 2v5m_A 58 DGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVA 132 (388)
T ss_dssp TTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTT
T ss_pred CceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCC
Confidence 3579999999997 9999999999999854 23433 33332221111111125678899999876543
No 317
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.11 E-value=3.6e-06 Score=62.62 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=47.4
Q ss_pred CCEEEEE---cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCCCCC
Q psy17207 7 ERRIMET---RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 7 ~R~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~~pi 83 (123)
+|+.+.. .+....|.|.+++.+|+|.|+|.|.|..+... +.|...+.+|. .....+..+.|.|.+.+.+ .
T Consensus 53 ~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~--l~V~~~~~~~~----~~v~~G~~v~l~C~~~~~p-~ 125 (363)
T 1wio_A 53 DRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQ--LLVFGLTANSD----THLLQGQSLTLTLESPPGS-S 125 (363)
T ss_dssp GGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETTEEEEEE--EEEEEEEESSC----SSEESBSCEEEEEECCTTC-C
T ss_pred cceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEECCCcEE--EEEEeCCCCCc----eEEecCCCEEEEEEcCCCC-C
Confidence 4555432 23456799999999999999999999866433 33333221111 0112577899999987743 3
Q ss_pred cceEE
Q psy17207 84 EEFKI 88 (123)
Q Consensus 84 ~~y~v 88 (123)
..+.|
T Consensus 126 ~~v~W 130 (363)
T 1wio_A 126 PSVQC 130 (363)
T ss_dssp CCEEE
T ss_pred CeEEE
Confidence 34553
No 318
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.10 E-value=3.4e-06 Score=53.45 Aligned_cols=37 Identities=32% Similarity=0.403 Sum_probs=31.2
Q ss_pred CCCEEEEE---cCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMET---RGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+.+.. ......|+|.+++.+|+|.|.|.+.|..|
T Consensus 56 ~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 56 NGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEASSG 95 (113)
T ss_dssp ETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECSSS
T ss_pred CCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 57887754 34567899999999999999999999876
No 319
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.09 E-value=3.8e-06 Score=52.76 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 59 PSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCEEEEccCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 47998876667789999999999999999999985
No 320
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.09 E-value=5.5e-06 Score=55.88 Aligned_cols=67 Identities=24% Similarity=0.298 Sum_probs=44.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEE---EEEecc------CCCceeecCCC---CCCCCeEEEEEEeCCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAY---LELSGK------PNPAIFRSHPQ---GRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~---i~l~~~------P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi 83 (123)
.+.|.|.+++.+|+|.|+|.|.|..|..... +.+... +.+|.+..... ...+..+.|.|.+.+.++.
T Consensus 65 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 143 (201)
T 3s97_C 65 NGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVP 143 (201)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCC
T ss_pred CCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCC
Confidence 4679999999999999999999988777652 222211 12232221111 1246788999998776544
No 321
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.09 E-value=4e-06 Score=59.56 Aligned_cols=40 Identities=25% Similarity=0.256 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (123)
.+|+.+...+....|+|.+++.+|+|.|+|.|.|..+...
T Consensus 195 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~f 234 (253)
T 3uzq_A 195 PARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTF 234 (253)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCB
T ss_pred CCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEE
Confidence 3688877667788999999999999999999999654433
No 322
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.09 E-value=1.8e-05 Score=52.40 Aligned_cols=55 Identities=22% Similarity=0.178 Sum_probs=36.8
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee-E----EEEEEeccCCCcee
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH-R----AYLELSGKPNPAIF 59 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~-~----~~i~l~~~P~p~~~ 59 (123)
..+||.....+....|+|.+++.+|+|.|.|.+.+..+.. . ..+.|.+.|.++.+
T Consensus 67 ~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~fg~GT~L~V~~~p~~~~~ 126 (134)
T 3kg5_A 67 EKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLAQL 126 (134)
T ss_dssp CTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECTTTCCEEECCCEEEEEECC------
T ss_pred ECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcCCCCceEECCCEEEEEecCCCHHHh
Confidence 3579988766778899999999999999999999874311 1 13445555555543
No 323
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.09 E-value=1.4e-05 Score=57.08 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=49.2
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc---------eeE----EEEEEec-cCCCceee-cCC--CCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG---------KHR----AYLELSG-KPNPAIFR-SHP--QGR 66 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G---------~~~----~~i~l~~-~P~p~~~~-~~~--~~~ 66 (123)
.+|+.+..+ .....|+|.+++.+|+|.|.|.+.+..| ... ..+.|.. .+.+|.+. ..+ ...
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~ 167 (256)
T 3sob_H 88 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKST 167 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC----
T ss_pred CCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccc
Confidence 378887643 3466799999999999999999998531 111 1344432 22333322 111 112
Q ss_pred CCCeEEEEEEeCCCCC-CcceEE
Q psy17207 67 LPNSYNITWMVSSYTP-LEEFKI 88 (123)
Q Consensus 67 ~~~~~~L~w~~~s~~p-i~~y~v 88 (123)
.+..+.|.|.+.+..| ...+.|
T Consensus 168 ~g~~v~L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 168 SGGTAALGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp -TTEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCcEEEEEEEEEEECCCeEEEE
Confidence 5688999999876433 333444
No 324
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.09 E-value=3.5e-06 Score=57.44 Aligned_cols=34 Identities=38% Similarity=0.548 Sum_probs=29.1
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEE-EEEe
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS 51 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-i~l~ 51 (123)
+.|.|.+++.+|+|.|+|.|.|.+|..... +.|.
T Consensus 165 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 199 (212)
T 2v9r_A 165 GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELT 199 (212)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred CeEEEeeCCHhhCeeEEEEEecccCceecceEEEE
Confidence 489999999999999999999999997653 4444
No 325
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.08 E-value=4e-06 Score=52.91 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 63 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEccCCEEEEEECCCCcccCEEEEEEEecC
Confidence 47998876667789999999999999999999985
No 326
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.08 E-value=4.7e-06 Score=52.30 Aligned_cols=44 Identities=16% Similarity=0.222 Sum_probs=35.0
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.|..+.. ...+|.|++++.+|+|.|.|.+.|..|.....+.+.+
T Consensus 60 ~r~~~~~--~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~~~ 103 (110)
T 1ncn_A 60 GRTSFDS--DSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMN 103 (110)
T ss_dssp TSEEEET--TTTEEEECSCCGGGCEEEEEEEEEECSSSEEEEEEEE
T ss_pred CcEEEEC--CCEEEEEcCCChHHCEEEEEEEEcCCCCceEEEEEEE
Confidence 4666642 2468999999999999999999999888877665543
No 327
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.08 E-value=1.2e-06 Score=66.91 Aligned_cols=77 Identities=12% Similarity=0.289 Sum_probs=49.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCceeE--EEEEEec-cCCCc-eeecC--CCCCCCCeEEEEEEe
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELSG-KPNPA-IFRSH--PQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~~i~l~~-~P~p~-~~~~~--~~~~~~~~~~L~w~~ 77 (123)
++|+.+..+ +....|.|.+++.+|+|.|+|.|.|..+... ..+.|.. .+.+| .+... .....+..+.|.|.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 468887643 3456899999999999999999999644332 2344442 22233 33211 111357899999998
Q ss_pred CCCCC
Q psy17207 78 SSYTP 82 (123)
Q Consensus 78 ~s~~p 82 (123)
.+..|
T Consensus 144 ~g~~P 148 (434)
T 1igy_B 144 KGYFP 148 (434)
T ss_dssp EEEBS
T ss_pred eeecC
Confidence 76533
No 328
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.08 E-value=2.7e-06 Score=63.51 Aligned_cols=72 Identities=18% Similarity=0.105 Sum_probs=45.4
Q ss_pred EEEEEEc----ccCCCCCeeEEEEEEcCCceeE-EEEEEe--ccCCCceeecCC-CCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 17 RHTLMIR----KVVASDFGNYSCEATNPMGKHR-AYLELS--GKPNPAIFRSHP-QGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 17 ~~~L~I~----~v~~~D~G~YtC~A~N~~G~~~-~~i~l~--~~P~p~~~~~~~-~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
.+.|.|. +++.+|+|.|+|.|.|..|... ..+.|. ..|..+...... ....+..+.|.|.+....|...+.|
T Consensus 72 ~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W 151 (404)
T 3p3y_A 72 SGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 151 (404)
T ss_dssp SCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEE
T ss_pred CceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEE
Confidence 4566665 8889999999999999999985 444444 334322211111 1125778899999854444444443
No 329
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.08 E-value=4.5e-06 Score=56.31 Aligned_cols=36 Identities=31% Similarity=0.369 Sum_probs=32.5
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
...|.|.++...|+|.|+|.|.|.+|....++.|..
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 199 (201)
T 3s97_C 164 GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEE
Confidence 458999999999999999999999999998877754
No 330
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.08 E-value=3.8e-06 Score=60.95 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=33.5
Q ss_pred EEEEEEcccCCCC-CeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASD-FGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D-~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|.|.+++.+| +|.|+|.|.|.+|.+..++.|..
T Consensus 276 ~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 276 ITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp EEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEEC
T ss_pred EEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEe
Confidence 4589999999999 99999999999999999998875
No 331
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.08 E-value=1.2e-05 Score=62.16 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=47.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCCceeecC-CC---CCCCCeEEEEEEeCCCCC-CcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNPAIFRSH-PQ---GRLPNSYNITWMVSSYTP-LEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p~~~~~~-~~---~~~~~~~~L~w~~~s~~p-i~~y~ 87 (123)
.+.|.|.+++..|.|.|+|.|.|..|.......|. ....+|.+... .. ...+..+.|.|.+.+..| ...+.
T Consensus 308 ~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~ 385 (475)
T 1iga_A 308 SSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVR 385 (475)
T ss_pred EEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEE
Confidence 45799999999999999999999999865443342 22334433221 11 124667999999987543 33444
No 332
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.08 E-value=2.9e-06 Score=54.79 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=34.7
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC-----CceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP-----MGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~-----~G~~~~~i~l~~ 52 (123)
+|+.+.. .....|+|.+++.+|+|.|.|.+.|. +|.+...+.|.+
T Consensus 82 ~R~~~~~-~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V 131 (135)
T 1xt5_A 82 GRASVAN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKV 131 (135)
T ss_dssp TTEEESC-TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEE
T ss_pred CcEEEec-CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEE
Confidence 6777643 23468999999999999999999994 566667666654
No 333
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.07 E-value=1.6e-05 Score=53.75 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=43.0
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEE-EEec-cCCCceeecC--CCCCCCCeEEEEEEeCCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYL-ELSG-KPNPAIFRSH--PQGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i-~l~~-~P~p~~~~~~--~~~~~~~~~~L~w~~~s~~pi 83 (123)
.++|.|.+++.+|+|.|.|.+.|..+...... .+.. .+.++..... ........+.+.|.+.+.++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p 148 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP 148 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc
Confidence 46799999999999999999999777665532 2222 2222222211 112246678888888776654
No 334
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.07 E-value=3.7e-06 Score=65.13 Aligned_cols=44 Identities=27% Similarity=0.283 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+.|+.+... ++|.|.+++.+|+|.|+|+|.|..|.+..++.|.+
T Consensus 432 ~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 475 (477)
T 2id5_A 432 NGRLTVFPD---GTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475 (477)
T ss_dssp ---CEECTT---SCEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CceEEeCCC---CEEEEeeCChHHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 345555432 47999999999999999999999999988877654
No 335
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.07 E-value=4.5e-06 Score=53.77 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+++...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 61 SSRFSGSGSGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred CCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 57998876667789999999999999999999985
No 336
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.06 E-value=5.4e-06 Score=56.17 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=30.8
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE-EEEEEeccC
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR-AYLELSGKP 54 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~~i~l~~~P 54 (123)
..+.|.|.+++ |+|.|+|.|.|.+|... ..+.|...|
T Consensus 156 ~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V~P 193 (195)
T 2c5d_C 156 PQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITVLP 193 (195)
T ss_dssp CCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEEec
Confidence 46789999997 89999999999999997 577776643
No 337
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.06 E-value=3.6e-06 Score=52.97 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 59 PDRFTGSGSATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp CTTEECCBCSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 46888765556778999999999999999999985
No 338
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.06 E-value=7.1e-06 Score=56.11 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=24.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 155 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred ceeEEEecccCcccCeEEEEEEEeCCC
Confidence 357999999999999999999999866
No 339
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.06 E-value=4.7e-06 Score=53.72 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+++...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 59 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 59 PSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CceEEEeccCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 57998876666789999999999999999999985
No 340
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.05 E-value=5e-06 Score=55.99 Aligned_cols=40 Identities=25% Similarity=0.338 Sum_probs=32.4
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEE
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY 47 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~ 47 (123)
.+.|+.+... +.|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 141 ~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~ 180 (189)
T 2v44_A 141 SDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDF 180 (189)
T ss_dssp CCTTEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred CCCCEEEecC---CcEEEEEcCcccCeEEEEEEEccccCceee
Confidence 3567776533 389999999999999999999999776643
No 341
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.04 E-value=1.1e-05 Score=59.39 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=47.5
Q ss_pred EEEEEEcccCCCCCe-eEEEEEEcCCceeEEEEE--EeccCCCceeec--CCCCCCCCeEEEEEEeCCCCCCcceEEEeE
Q psy17207 17 RHTLMIRKVVASDFG-NYSCEATNPMGKHRAYLE--LSGKPNPAIFRS--HPQGRLPNSYNITWMVSSYTPLEEFKIKYR 91 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~~i~--l~~~P~p~~~~~--~~~~~~~~~~~L~w~~~s~~pi~~y~v~yr 91 (123)
.+.|.|.+++.+|+| .|+|.|.|..|....... +...| |..+.. ......+..+.|.|.+.+.++...+. ||+
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~-p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~-W~k 165 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKP-PSCIPETYELGTHDKYGIDLYCGILYAKHYNNIT-WYK 165 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCC-CSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEE-EEE
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCC-CcEeccccceEEeCCCcEEEEeccCCCCCCceEE-EEE
Confidence 358999999999999 999999999987665442 22222 212211 11223477899999887766233444 344
No 342
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.04 E-value=7.4e-06 Score=57.79 Aligned_cols=75 Identities=19% Similarity=0.270 Sum_probs=47.3
Q ss_pred cCCCEEEEEcC--CEEEEEEcccCCCCCeeEEEEEEcC-------CceeEEEEEEec---------cCCCceeecCCCC-
Q psy17207 5 TTERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNP-------MGKHRAYLELSG---------KPNPAIFRSHPQG- 65 (123)
Q Consensus 5 ~d~R~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~-------~G~~~~~i~l~~---------~P~p~~~~~~~~~- 65 (123)
..+|+++..+. ....|+|.+++.+|+|.|.|.+.|. +|.. ..+.|.. .|.+.++. +..
T Consensus 64 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~-~~L~V~~~~~~l~~~~~p~~~v~~--p~~~ 140 (230)
T 1ypz_F 64 EYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEG-TKLIVIPSDKRLDADISPKPTIFL--PSVA 140 (230)
T ss_dssp SSSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSC-EEEEEECCCTTCCSCCSCCCCEEC--CCHH
T ss_pred cCCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCC-EEEEEecccccCcccCCCCceEEC--CCch
Confidence 35788876432 5678999999999999999999985 1222 2344441 13333322 111
Q ss_pred --CCCCeEEEEEEeCCCCC
Q psy17207 66 --RLPNSYNITWMVSSYTP 82 (123)
Q Consensus 66 --~~~~~~~L~w~~~s~~p 82 (123)
..+..+.|.|.+.+..|
T Consensus 141 ~v~~g~~~~L~C~~~g~~P 159 (230)
T 1ypz_F 141 ETNLHKTGTYLCLLEAFFP 159 (230)
T ss_dssp HHHHHSCEEEEEEEEEESS
T ss_pred hhccCCcceEEEEEeeecC
Confidence 02467899999876533
No 343
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.03 E-value=5.2e-06 Score=57.20 Aligned_cols=42 Identities=29% Similarity=0.421 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEE-EEEe
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAY-LELS 51 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~-i~l~ 51 (123)
+.|+.+. .+.|.|.+++.+|+|.|+|.|.|.+|..... +.|.
T Consensus 155 ~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~ 197 (212)
T 2yd1_A 155 NPRYSLK----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLY 197 (212)
T ss_dssp STTEEEE----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCeEEcc----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEE
Confidence 3566543 2389999999999999999999999999753 4444
No 344
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.03 E-value=7.6e-06 Score=57.59 Aligned_cols=82 Identities=16% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-------eeE----EEEEEec-cCCCceee--c-CCCCCCCC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-------KHR----AYLELSG-KPNPAIFR--S-HPQGRLPN 69 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-------~~~----~~i~l~~-~P~p~~~~--~-~~~~~~~~ 69 (123)
+|+.+..+ .....|+|.+++.+|+|.|.|.+.+..+ ... ..+.|.. .+.+|.+. . ......+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~ 145 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGG 145 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSS
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCC
Confidence 68887643 3567899999999999999999987531 011 1233332 22233322 1 11122567
Q ss_pred eEEEEEEeCCCCC-CcceEE
Q psy17207 70 SYNITWMVSSYTP-LEEFKI 88 (123)
Q Consensus 70 ~~~L~w~~~s~~p-i~~y~v 88 (123)
.+.|.|.+.+..| ...+.|
T Consensus 146 ~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 146 TAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEEEEEEEBSSCCEEEE
T ss_pred CEEEEEEEEEEECCCeEEEE
Confidence 8999999876434 334444
No 345
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.03 E-value=4.9e-06 Score=61.15 Aligned_cols=66 Identities=11% Similarity=0.113 Sum_probs=43.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec---cCCCceee---cCCCCCCCCeEEEEEEeCCCCC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG---KPNPAIFR---SHPQGRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~---~P~p~~~~---~~~~~~~~~~~~L~w~~~s~~p 82 (123)
.+.|.|.+++.+|.|.|+|.|.|..+.......|.. ...+|.+. .......+..+.|.|.+.+..|
T Consensus 177 ~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p 248 (323)
T 2wqr_A 177 TSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMP 248 (323)
T ss_dssp EEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBS
T ss_pred EEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeC
Confidence 458999999999999999999999755433443321 22233322 1111123789999999977433
No 346
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.03 E-value=6.7e-06 Score=55.41 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=32.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+.|.|.+++.+|+|.|+|.|.|..|....++.|..
T Consensus 142 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V 177 (184)
T 2ny1_B 142 GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 177 (184)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEE
Confidence 458999999999999999999999999998776654
No 347
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.02 E-value=4.8e-06 Score=56.43 Aligned_cols=35 Identities=6% Similarity=0.018 Sum_probs=30.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~ 51 (123)
.+.|.|.++...|.|.|+|+|+|..|.....+.+.
T Consensus 174 ~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 174 TSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp EEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 45799999999999999999999999887665443
No 348
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.02 E-value=2.2e-05 Score=61.12 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=51.4
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceee-cC--CC-CCCCC-eEEEEEEeCCCCCC--cceEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFR-SH--PQ-GRLPN-SYNITWMVSSYTPL--EEFKI 88 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~-~~--~~-~~~~~-~~~L~w~~~s~~pi--~~y~v 88 (123)
...+|+|.+++.+|.|.|+|.+.|..|..+..+.|...- +|.+. .. .. ...+. .+.|.|.+.+..|. ..+.|
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~-pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW 330 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK-PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEW 330 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB-CCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc-CCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEEE
Confidence 367899999999999999999999999888777665432 22222 11 11 11233 68899998876554 45555
Q ss_pred EeEE
Q psy17207 89 KYRK 92 (123)
Q Consensus 89 ~yr~ 92 (123)
.+|.
T Consensus 331 ~~rd 334 (401)
T 3f8u_B 331 ELRG 334 (401)
T ss_dssp EEES
T ss_pred EecC
Confidence 4453
No 349
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.02 E-value=3.7e-06 Score=61.74 Aligned_cols=60 Identities=18% Similarity=0.127 Sum_probs=42.7
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCce----eecCCCCCCCCeEEEEEEe
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAI----FRSHPQGRLPNSYNITWMV 77 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~----~~~~~~~~~~~~~~L~w~~ 77 (123)
+.|.|.+++..|+|.|+|.|.|..|.....+.|.....++. .........+..+.|.|.+
T Consensus 81 ~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 144 (339)
T 3o4o_C 81 GALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPD 144 (339)
T ss_dssp TEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCS
T ss_pred CeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecC
Confidence 48999999999999999999999998888777664322211 1000111247789999983
No 350
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.02 E-value=2.1e-06 Score=58.44 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=31.1
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeE--EEEEEec
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELSG 52 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~~i~l~~ 52 (123)
...+.|.|.++..+|+|.|+|.|.|.+|... ..+.|..
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEE
T ss_pred CCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEE
Confidence 3456899999999999999999999999983 3455543
No 351
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.02 E-value=4.6e-05 Score=57.96 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=46.4
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCC---CCCCCeEEEEEEeCCCCCCcce
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQ---GRLPNSYNITWMVSSYTPLEEF 86 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi~~y 86 (123)
....|.|.+++. |.| |+|.|.|..|.....+.|...-.|..+...+. ...+..+.|.|.+.+.+|...+
T Consensus 48 ~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~ 119 (450)
T 1z7z_I 48 NRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANL 119 (450)
T ss_dssp TEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGE
T ss_pred CceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCc
Confidence 455899999987 999 99999988777776555443212222211111 2357899999999887776544
No 352
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.02 E-value=2.4e-05 Score=50.62 Aligned_cols=64 Identities=14% Similarity=0.356 Sum_probs=43.3
Q ss_pred ccCCCceeecCCCCCCCCeEEEEEEe--CCCCCCcceEEEeEEcCCCCCCc-eeeeeccccccccceeeeeeec
Q psy17207 52 GKPNPAIFRSHPQGRLPNSYNITWMV--SSYTPLEEFKIKYRKIPGNEPSP-MSNQLTGTNQYQNRRLVRKITE 122 (123)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~w~~--~s~~pi~~y~v~yr~~~~~~~~w-~~~~~~~~~~~~~~~~~~~~~~ 122 (123)
..|+||.+.... ...+++.|.|.+ ++++||+.|.|+||.... ..| ...... +..+.+.|.+|.+
T Consensus 7 ~~P~pP~~~~~~--~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~--~~w~~~~~~~---~~~~~~~l~~L~p 73 (114)
T 2kbg_A 7 REPSPPSIHGQP--SSGKSFKLSITKQDDGGAPILEYIVKYRSKDK--EDQWLEKKVQ---GNKDHIILEHLQW 73 (114)
T ss_dssp CCCCSCCEECCB--CSTTCEEEEECCCCCSSSCCSEEEEEEEESSC--CSCCEEEEEE---TTTCCEEECCCCT
T ss_pred CCccCCcccccc--cCCCEEEEEEECCCCCCCcccEEEEEEEeCCC--CCcEEeEEcC---CCcCEEEEcCCCC
Confidence 468888776533 468999999997 378999999999999732 344 333322 2345556665544
No 353
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.01 E-value=3.1e-06 Score=63.09 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=51.3
Q ss_pred CCEEEEEEcccCCCCCe-eEEEEEEcCCceeEEEEEEeccCCCce-eecCCCCCCCCeEEEEEEeCCCCCCcceEE
Q psy17207 15 GSRHTLMIRKVVASDFG-NYSCEATNPMGKHRAYLELSGKPNPAI-FRSHPQGRLPNSYNITWMVSSYTPLEEFKI 88 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G-~YtC~A~N~~G~~~~~i~l~~~P~p~~-~~~~~~~~~~~~~~L~w~~~s~~pi~~y~v 88 (123)
...+.|.|.+++..|+| .|+|.|.|..|.....+.|.... +|. +...+ ..+..+.|.|.+.+.++. .+.|
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~-~P~i~~~~~--~~g~~v~l~C~~~g~P~p-~i~W 280 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF-PASVQLHTA--VEMHHWCIPFSVDGQPAP-SLRW 280 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE-EEEEEECCC--EESSSEEEEEEEEEESCC-EEEE
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC-CCeeeeccC--ccCceEEEEEEeeecCCC-cEEE
Confidence 35778999999999999 99999999999998887766422 222 22211 246789999999877444 4554
No 354
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.00 E-value=3.2e-06 Score=64.62 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=46.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEe-ccCCCceeecCCC---CCCCCeEEEEEEeCCC-CCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKH--RAYLELS-GKPNPAIFRSHPQ---GRLPNSYNITWMVSSY-TPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~-~~P~p~~~~~~~~---~~~~~~~~L~w~~~s~-~pi~~y~ 87 (123)
.+.|.|.+++.+|.|.|+|.|.|..|.. ...+.+. ..+.+|.+..... ......+.|.|.+.+. ++...+.
T Consensus 304 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~ 381 (444)
T 1igt_B 304 VSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVE 381 (444)
T ss_dssp EEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEE
Confidence 4589999999999999999999999987 4444331 2334444332111 1234459999999774 4333444
No 355
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.00 E-value=5.3e-06 Score=57.77 Aligned_cols=39 Identities=13% Similarity=-0.039 Sum_probs=28.0
Q ss_pred cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+....+.+.+++.+|.|.|+|+|+|.+|..+.++.|..
T Consensus 173 ~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 173 VGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp TSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 344455667778899999999999999999999887764
No 356
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.99 E-value=5.8e-06 Score=58.89 Aligned_cols=72 Identities=7% Similarity=0.053 Sum_probs=44.7
Q ss_pred CEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc---eeE-----EEEEEec---cCCCceeecCCCCC----CCCeEE
Q psy17207 8 RRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG---KHR-----AYLELSG---KPNPAIFRSHPQGR----LPNSYN 72 (123)
Q Consensus 8 R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G---~~~-----~~i~l~~---~P~p~~~~~~~~~~----~~~~~~ 72 (123)
|+.+...+... |.|.+++.+|+|.|+|.+.|..| ... ..+.|.. .+.+|.+....... .+..+.
T Consensus 65 R~~~~~~~~~~-L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~ 143 (253)
T 3to4_D 65 DYLATRVTDTE-LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (253)
T ss_dssp EEEEECCSSSC-CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEE
T ss_pred cEEEEeCCCCe-EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceE
Confidence 88776544444 99999999999999999997754 111 1334432 12333332111110 236899
Q ss_pred EEEEeCCC
Q psy17207 73 ITWMVSSY 80 (123)
Q Consensus 73 L~w~~~s~ 80 (123)
|.|.+.+.
T Consensus 144 L~C~~~g~ 151 (253)
T 3to4_D 144 LVCLATGF 151 (253)
T ss_dssp EEEEEEEE
T ss_pred EEEEEceE
Confidence 99998774
No 357
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.99 E-value=7.6e-06 Score=51.91 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 65 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 65 PDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCEEEeecCCEEEEEECCCCcccCEEEEEEEeeC
Confidence 47998876666789999999999999999999985
No 358
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.99 E-value=6.3e-06 Score=57.65 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=28.9
Q ss_pred EEEEEcccCCCCCeeEEEEEEc---CCceeEEEEEEe
Q psy17207 18 HTLMIRKVVASDFGNYSCEATN---PMGKHRAYLELS 51 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N---~~G~~~~~i~l~ 51 (123)
+.|.|.+++.+|+|.|+|.|.| .+|....++.|.
T Consensus 213 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 213 RNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp TEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred cEEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 5899999999999999999999 666666666654
No 359
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=97.99 E-value=3.1e-06 Score=53.56 Aligned_cols=23 Identities=30% Similarity=0.482 Sum_probs=21.3
Q ss_pred ccCCCCCeeEEEEEEcCCceeEE
Q psy17207 24 KVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
+++.+|+|.|+|.|.|.+|.+.+
T Consensus 78 ~v~~~D~G~Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 78 RKSRPDEGVYVCVARNYLGEAVS 100 (117)
T ss_dssp TTBCSSCEEEEEEEEETTEEEEC
T ss_pred CCCcCcCEEEEEEEEeCccceEe
Confidence 66899999999999999999986
No 360
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=97.99 E-value=1.8e-05 Score=55.67 Aligned_cols=74 Identities=15% Similarity=0.301 Sum_probs=47.8
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC---------CceeEEEEEEecc---CCCceeecCCCCCCCCeE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP---------MGKHRAYLELSGK---PNPAIFRSHPQGRLPNSY 71 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~---------~G~~~~~i~l~~~---P~p~~~~~~~~~~~~~~~ 71 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|... .+.|... +.|.++.... ....+
T Consensus 56 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~~g~gt-~L~V~~~~~~~~P~V~~~~~---~~~~v 131 (206)
T 1kgc_D 56 NRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAGGTSYGKLTFGQGT-ILTVHPNIQNPDPAVYQLRD---SKSSD 131 (206)
T ss_dssp CSSEEEEECTTSSEEEEEESSCCGGGCEEEEEECCCCSTTCCCCCCCCCCE-EEEEECCCSSCCCEEEECCC---CTTCC
T ss_pred CCCEEEEEcCCCCEEEEEECCCCcccCccEEEEEecccCCCcccceECCCE-EEEEeCCCCCCCCeEEeecC---CCCCe
Confidence 57888863 345678999999999999999999873 33322 4445432 2233333211 12377
Q ss_pred EEEEEeCCCCCC
Q psy17207 72 NITWMVSSYTPL 83 (123)
Q Consensus 72 ~L~w~~~s~~pi 83 (123)
.|.|.+.+..|-
T Consensus 132 ~L~C~~~g~~P~ 143 (206)
T 1kgc_D 132 KSVCLFTDFDSQ 143 (206)
T ss_dssp CEEEEEESCCTT
T ss_pred EEEEEeeceecc
Confidence 899998765443
No 361
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=97.99 E-value=1.1e-05 Score=51.66 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEE-EcCCceeEEEEEEec
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEA-TNPMGKHRAYLELSG 52 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A-~N~~G~~~~~i~l~~ 52 (123)
.+|+.+.. ...|+|++++.+|+|.|+|.+ .+..|.....+.|.+
T Consensus 62 ~~R~~~~~---~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 106 (117)
T 3q0h_A 62 KDRVAPGP---GLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEV 106 (117)
T ss_dssp TTTEEECS---TTCEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEE
T ss_pred cCcEEeCC---ceEEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEE
Confidence 46777632 458999999999999999985 456788877666654
No 362
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=97.98 E-value=1e-05 Score=55.76 Aligned_cols=38 Identities=26% Similarity=0.318 Sum_probs=33.2
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+....|.|.+++.+|.|.|+|.|.|.+|....++.|..
T Consensus 167 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 204 (222)
T 4i0k_A 167 GLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTI 204 (222)
T ss_dssp SCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred CeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEE
Confidence 34456899999999999999999999999999877765
No 363
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.98 E-value=7.1e-06 Score=58.28 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|....
T Consensus 200 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 237 (257)
T 3gkz_A 200 PARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPF 237 (257)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred CCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCce
Confidence 47888877777889999999999999999999986543
No 364
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=97.97 E-value=3.4e-05 Score=50.03 Aligned_cols=51 Identities=14% Similarity=0.328 Sum_probs=38.0
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNP 56 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p 56 (123)
.+|+.+.. ......|+|.+++.+|+|.|.|............++|.+.|.|
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~~~~~~~~v~L~V~~~~ 113 (124)
T 2nms_A 61 RDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPAP 113 (124)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCccEEEEEEEeCCC
Confidence 46888763 2456789999999999999999998775444556677665443
No 365
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=97.97 E-value=8.4e-06 Score=51.29 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=30.1
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+++. ..+....|+|++++.+|+|.|.|.+.|.
T Consensus 58 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 58 PDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA 94 (109)
T ss_dssp CTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 4799886 4456778999999999999999999985
No 366
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=97.97 E-value=9.9e-06 Score=51.19 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+++...+....|+|++++.+|+|.|.|.+.|.
T Consensus 64 ~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 64 DSRFSMTVNDQKFDLNIIGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp CTTEEEEESSSBEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEcCCeEEEEECCCChhHCEEEEEEEccC
Confidence 57998876666779999999999999999999985
No 367
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.97 E-value=1.5e-05 Score=56.05 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+.+...+...+|+|.+++.+|+|.|+|.|.|..+
T Consensus 193 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 229 (247)
T 2ghw_B 193 PDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWP 229 (247)
T ss_dssp CTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSS
T ss_pred CCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCC
Confidence 5788887667788999999999999999999999643
No 368
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=97.96 E-value=2.3e-06 Score=55.78 Aligned_cols=50 Identities=14% Similarity=0.050 Sum_probs=35.4
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCC
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPN 55 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~ 55 (123)
.+|+.+. ..+....|+|.+++.+|+|.|.|.+.+..+.....+.|...|.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~~~~~~~~t~l~v~~~ 116 (126)
T 2h32_A 65 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGARSSEKEEREREWEEEM 116 (126)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSCCCCCCTTCC-----
T ss_pred CCCEEEEEeCCCCeEEEEECCCChhHCEEEEEEEEcCCCCcceeEEEeeccC
Confidence 4699886 3455778999999999999999999998776554334444333
No 369
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.96 E-value=1.2e-05 Score=56.27 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=30.3
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+. ..+....|+|.+++.+|+|.|+|.|.|..
T Consensus 185 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 185 DGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp ETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 5788775 34557899999999999999999999984
No 370
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.96 E-value=8.4e-06 Score=51.53 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 62 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 62 PDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSS 96 (111)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCcEEEEcCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 47898876666788999999999999999999885
No 371
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.95 E-value=1.3e-05 Score=57.48 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=45.3
Q ss_pred CEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCce----e--EEEEEEec---cCCCceee-cCCCC---CCCCeEEE
Q psy17207 8 RRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGK----H--RAYLELSG---KPNPAIFR-SHPQG---RLPNSYNI 73 (123)
Q Consensus 8 R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~----~--~~~i~l~~---~P~p~~~~-~~~~~---~~~~~~~L 73 (123)
|+.+.. ......|.|.+++.+|+|.|.|.+.|..+. . ...+.|.. .+.+|.+. ..+.. ..+..+.|
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 169 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 169 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEE
Confidence 777653 345678999999999999999999974321 1 12344443 22233322 11111 12678999
Q ss_pred EEEeCCC
Q psy17207 74 TWMVSSY 80 (123)
Q Consensus 74 ~w~~~s~ 80 (123)
.|.+.+.
T Consensus 170 ~C~~~g~ 176 (270)
T 3qib_D 170 VCLATGF 176 (270)
T ss_dssp EEEEEEE
T ss_pred EEEecce
Confidence 9998763
No 372
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.94 E-value=2.7e-06 Score=58.23 Aligned_cols=29 Identities=14% Similarity=0.357 Sum_probs=26.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCcee
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKH 44 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~ 44 (123)
..+.|.|.++..+|+|.|+|+|.|.+|..
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 45679999999999999999999999987
No 373
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.93 E-value=1.2e-05 Score=57.06 Aligned_cols=39 Identities=23% Similarity=0.283 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCcee
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKH 44 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~ 44 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|..+..
T Consensus 196 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 234 (256)
T 3umt_A 196 PKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPT 234 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCE
T ss_pred CCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcE
Confidence 478888777778899999999999999999999965443
No 374
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.92 E-value=1.6e-05 Score=54.07 Aligned_cols=31 Identities=13% Similarity=0.070 Sum_probs=27.2
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYL 48 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i 48 (123)
+.|.|.++..+|.|.|+|+|.|..|....+.
T Consensus 181 s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~ 211 (225)
T 4fmk_A 181 SRYSLVPVGRADGVKVTCRVEHESFEEPILL 211 (225)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred EEEEEeeCCHHHCCEEEEEEEcCCCCeEEEE
Confidence 5799999999999999999999988775543
No 375
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.92 E-value=1.2e-05 Score=50.84 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+...+....|+|.+++.+|+|.|.|.+.|.
T Consensus 64 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 64 PDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTH 98 (113)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCCEEEEccCCEEEEEECCCChHHCEEEEEEEecC
Confidence 47888876666788999999999999999999875
No 376
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=5.4e-06 Score=50.76 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=26.0
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
....|.|.+++.+|+|.|+|.|.|..|....
T Consensus 55 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~ 85 (96)
T 2ens_A 55 PSPVLILPEIGPQDQGTYSCVATHSSHGPQE 85 (96)
T ss_dssp CCSEEEEESCCTTTCEEEECEECCSSCCCEE
T ss_pred CCCEEEECCCCcccCEEEEEEEEeCCCCcEE
Confidence 3468999999999999999999997665443
No 377
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.92 E-value=0.00019 Score=53.04 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=61.7
Q ss_pred EEEEEEcccC-CCCCeeEEEEEEcCCceeEE---EEEEe--ccCCCceeecCCC-CCCCCeEEEEEEeCC----CCCCcc
Q psy17207 17 RHTLMIRKVV-ASDFGNYSCEATNPMGKHRA---YLELS--GKPNPAIFRSHPQ-GRLPNSYNITWMVSS----YTPLEE 85 (123)
Q Consensus 17 ~~~L~I~~v~-~~D~G~YtC~A~N~~G~~~~---~i~l~--~~P~p~~~~~~~~-~~~~~~~~L~w~~~s----~~pi~~ 85 (123)
...+.|.... ....-.+.|.|.|.+|.... .+.+. ..|.||....... .....++.|+|.++. ..++..
T Consensus 154 ~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~ 233 (325)
T 1n26_A 154 KFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233 (325)
T ss_dssp EEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEE
T ss_pred CEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEE
Confidence 3456777654 23445568999999998753 22222 3577775443211 113468999999753 356799
Q ss_pred eEEEeEEcCCCCCCceeeeeccccccccceeeeeee
Q psy17207 86 FKIKYRKIPGNEPSPMSNQLTGTNQYQNRRLVRKIT 121 (123)
Q Consensus 86 y~v~yr~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 121 (123)
|.|+||... ...|..+... ...+.+.+..|.
T Consensus 234 Y~V~yr~~~--~~~W~~~~~~---~~~~~~~l~~L~ 264 (325)
T 1n26_A 234 FELRYRAER--SKTFTTWMVK---DLQHHCVIHDAW 264 (325)
T ss_dssp EEEEEEETT--CSCCEEEECG---GGCSEEEESSCC
T ss_pred EEEEEEeCC--CCCCEEEccc---CCceEEEEeCCC
Confidence 999999874 3678876542 223445555443
No 378
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=97.90 E-value=2.2e-05 Score=54.91 Aligned_cols=73 Identities=19% Similarity=0.336 Sum_probs=46.9
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC--------CceeEEEEEEecc---CCCceeecCCCCCCCCeEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP--------MGKHRAYLELSGK---PNPAIFRSHPQGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~--------~G~~~~~i~l~~~---P~p~~~~~~~~~~~~~~~~ 72 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|.. ..+.|... +.|.++..... ...+.
T Consensus 58 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~g~g-t~L~V~~~~~~~~P~V~~~~~~---~~~~~ 133 (203)
T 2bnu_A 58 SGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSYIPTFGRG-TSLIVHPYIQNPDPAVYQLRRS---KSSDK 133 (203)
T ss_dssp ETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEECSSSTTCCEECCC-EEEEEECCCSSCCCEEEEECCS---SSSSC
T ss_pred CCCeEEEEcCCCCEEEEEEeeCCcccCeEEEEEEEcCcCcceeeeeCCC-EEEEEeCCCCCCCCeEEecCCC---CCCcE
Confidence 47888763 345678999999999999999999874 1221 24444432 22333332221 23678
Q ss_pred EEEEeCCCCC
Q psy17207 73 ITWMVSSYTP 82 (123)
Q Consensus 73 L~w~~~s~~p 82 (123)
|.|.+.+..|
T Consensus 134 L~C~~~g~~P 143 (203)
T 2bnu_A 134 SVCLFTDFDS 143 (203)
T ss_dssp EEEEEESCCT
T ss_pred EEEEcccccc
Confidence 9999877433
No 379
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.90 E-value=1.4e-05 Score=51.75 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
.+|+.+........|+|++++.+|+|.|.|.+.|...
T Consensus 63 ~~r~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 99 (126)
T 4ffy_L 63 PARFSGSGSETDFTLTIDSVETDDAATYYCQQNNEDP 99 (126)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCC
Confidence 4788887666788999999999999999999998643
No 380
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.89 E-value=1.6e-06 Score=70.06 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=0.0
Q ss_pred cccCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--ccCCC
Q psy17207 3 LETTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GKPNP 56 (123)
Q Consensus 3 l~~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~P~p 56 (123)
|..+.|+.+.. ..+.|.|.++..+|+|.|+|.|.|.+|.+..++.|. ++|+.
T Consensus 707 l~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 707 LVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 760 (772)
T ss_dssp --------------------------------------------------------
T ss_pred CcCCCCeEEcC--CCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCc
Confidence 44455655542 357899999999999999999999999999876665 45543
No 381
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.89 E-value=1.6e-05 Score=54.18 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=33.7
Q ss_pred cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 14 RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 14 ~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
.+....|.|.++...|.|.|+|.|.|.+|.....+.|..
T Consensus 153 ~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 153 EGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp TSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 344567889999999999999999999999999887764
No 382
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.89 E-value=2.4e-05 Score=57.98 Aligned_cols=28 Identities=7% Similarity=0.250 Sum_probs=24.4
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
+.|+|.+++..| |.|+|.|.|..|....
T Consensus 182 s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 209 (344)
T 1za6_B 182 SVVTVPSSSLGT-QTYICNVNHKPSNTKV 209 (344)
T ss_dssp EEEEEETTHHHH-BCEEEEEEEGGGTEEE
T ss_pred EEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 489999998888 9999999999997543
No 383
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.89 E-value=1.2e-05 Score=57.29 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|..
T Consensus 197 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 197 PSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 478887665667899999999999999999999975
No 384
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=97.88 E-value=1.8e-05 Score=50.97 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=34.6
Q ss_pred CCEEEEE---cCCEEEEEEcccCCCCCeeEEEEEEc-CCceeEEEEEEec
Q psy17207 7 ERRIMET---RGSRHTLMIRKVVASDFGNYSCEATN-PMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~---~~~~~~L~I~~v~~~D~G~YtC~A~N-~~G~~~~~i~l~~ 52 (123)
+|+.+.. .....+|+|.+++.+|+|.|.|.+.+ ..|...+.+.|.+
T Consensus 66 ~R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 66 GRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp TTEECCCSSCCTTBCCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC
T ss_pred eEEEEecCCCcCCEEEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEE
Confidence 4666532 22346799999999999999997665 6788887777764
No 385
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.88 E-value=8.1e-06 Score=56.74 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=27.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCC-ceeEEE--EEEeccCCCc
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPM-GKHRAY--LELSGKPNPA 57 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~-G~~~~~--i~l~~~P~p~ 57 (123)
...|.|.+++.+|+|.|+|.|.|.. |..... +.|.+.|.+|
T Consensus 136 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 136 NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVS 179 (204)
T ss_dssp CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred CceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCC
Confidence 4579999999999999999999954 443333 4455555444
No 386
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.88 E-value=1.6e-05 Score=53.37 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=28.8
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE-E--EEEEeccC
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR-A--YLELSGKP 54 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~--~i~l~~~P 54 (123)
...|.|.+++.+|+|.|+|.|.|..|... . .+.|.+.|
T Consensus 133 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 133 NHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred CCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 56899999999999999999999755433 2 34444444
No 387
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=97.87 E-value=1.4e-05 Score=53.74 Aligned_cols=39 Identities=26% Similarity=0.321 Sum_probs=30.8
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
.+.|+.+... +.|.|.+++.+|+|.|+|.|.|..|....
T Consensus 145 ~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 183 (191)
T 1epf_A 145 KDVRFIVLSN---NYLQIRGIKKTDEGTYRCEGRILARGEIN 183 (191)
T ss_dssp CCTTEEECTT---SCEEETTCCGGGCEEEEEEEEEGGGTEEE
T ss_pred CCceEEEecC---CeEEECCCChhhCEEEEEEEEEecceeEE
Confidence 3456666533 37999999999999999999999965544
No 388
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.87 E-value=2.2e-05 Score=56.22 Aligned_cols=37 Identities=30% Similarity=0.401 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|..+
T Consensus 184 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 220 (256)
T 1nqb_A 184 PDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVP 220 (256)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCc
Confidence 4688877666788999999999999999999999643
No 389
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.87 E-value=2.2e-05 Score=49.90 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+++...+....|+|++++.+|+|.|.|.+.+..
T Consensus 64 ~~R~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 99 (115)
T 2otu_A 64 PDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTI 99 (115)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEECC
T ss_pred CCCEEEEccCCEEEEEECCCChhHCEEEEEEEecCC
Confidence 368988766667899999999999999999998753
No 390
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=97.86 E-value=2.1e-05 Score=50.28 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+.+...+....|+|++++.+|+|.|.|.+.+..
T Consensus 61 ~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~ 96 (120)
T 1oaq_L 61 PARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSN 96 (120)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETT
T ss_pred CCceEEecCCCeEEEEECCCChhhCeEEEEEEccCC
Confidence 479988766667899999999999999999999864
No 391
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=97.86 E-value=2.2e-05 Score=49.66 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=29.4
Q ss_pred cCCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 5 TTERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 5 ~d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.++|+.+.. ......|+|.+++.+|+|.|.|.+.|.
T Consensus 51 ~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 88 (111)
T 2ywz_A 51 IGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADYS 88 (111)
T ss_dssp SBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred eCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 457887642 245778999999999999999999983
No 392
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.86 E-value=1.3e-05 Score=57.13 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=33.0
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
.+|+.+.. ......|+|.+++.+|+|.|+|.|.|..|....
T Consensus 197 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~f 238 (256)
T 3tf7_C 197 PDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYF 238 (256)
T ss_dssp CTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEE
T ss_pred CCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEE
Confidence 46776653 345668999999999999999999999886654
No 393
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.85 E-value=2.1e-05 Score=49.88 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=29.9
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+.. ......|+|.+++.+|+|.|.|.+.+.
T Consensus 62 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 62 QGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTLP 98 (116)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECT
T ss_pred CCCEEEEEecCCCEEEEEEccCChHHCEEEEEEEeCC
Confidence 58998864 455678999999999999999999984
No 394
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=97.85 E-value=1e-05 Score=52.22 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCce-eEEEEEEe
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGK-HRAYLELS 51 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~-~~~~i~l~ 51 (123)
+|+.+. ...++|+|.+++.+|+|.|+|...|..+. ....+.|.
T Consensus 64 ~R~~l~--~~~~sL~I~nv~~~DsG~Y~c~v~~~~~~~~~~~~~L~ 107 (121)
T 2edo_A 64 GRVRLD--PQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQ 107 (121)
T ss_dssp TTCEEC--TTTCCEEESSCCGGGCSEEEEEEEETTTEEEECCEECE
T ss_pred CcEEEe--CCCceEEEeCCCHHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 466553 23458999999999999999999987653 33444443
No 395
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.84 E-value=2.5e-05 Score=56.34 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=30.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+..+ .....|.|.+++.+|+|.|+|.|.|..
T Consensus 199 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 199 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 468887653 456689999999999999999999983
No 396
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.84 E-value=0.00011 Score=57.86 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=49.2
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCCc-----------e----eEEEEEEec-cCCCceee-cCCC--
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPMG-----------K----HRAYLELSG-KPNPAIFR-SHPQ-- 64 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~G-----------~----~~~~i~l~~-~P~p~~~~-~~~~-- 64 (123)
++|+.+..+ +....|.|++++.+|+|.|.|.+.+..| . ....+.|.. .+.+|.+. ..+.
T Consensus 66 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~ 145 (512)
T 1zvo_C 66 RGRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCR 145 (512)
T ss_pred CCceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcc
Confidence 478888643 3467999999999999999999998753 1 112344443 22334322 1111
Q ss_pred -CCCCCeEEEEEEeCCCCC
Q psy17207 65 -GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 65 -~~~~~~~~L~w~~~s~~p 82 (123)
......+.|.|.+.+..|
T Consensus 146 ~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 146 HPKDNSPVVLACLITGYHP 164 (512)
T ss_pred cccCCCeEEEEEEEEeeec
Confidence 123478999999977644
No 397
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.84 E-value=1.5e-05 Score=54.42 Aligned_cols=27 Identities=15% Similarity=0.333 Sum_probs=24.7
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 153 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 153 HQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred cceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 457899999999999999999999876
No 398
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.83 E-value=1.1e-05 Score=50.62 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG 52 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~ 52 (123)
+|+.+.. ....|+|.+++.+|+|.|.|.+.+.. .....+.|..
T Consensus 64 ~R~~~~~--~~~sL~I~~v~~~DsG~Y~C~v~~~~-~~~~~~~L~V 106 (110)
T 2ptt_A 64 GRVYLEE--NNGALHISNVRKEDKGTYYMRVLRET-ENELKITLEV 106 (110)
T ss_dssp TTEEECT--TTCCEEESSCCGGGCEEEEEEEESSS-BCCEEEEEEE
T ss_pred CcEEEeC--CCccEEECCCCcccCeEEEEEEEcCC-CcEEEEEEEE
Confidence 5777742 45689999999999999999998875 3334555543
No 399
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.83 E-value=2.6e-05 Score=48.95 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=28.9
Q ss_pred cCCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEc
Q psy17207 5 TTERRIMET--RGSRHTLMIRKVVASDFGNYSCEATN 39 (123)
Q Consensus 5 ~d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N 39 (123)
.++|+.+.. ......|+|.+++.+|+|.|.|.+.|
T Consensus 51 ~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 51 IGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp CBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred eCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 457887642 24577899999999999999999998
No 400
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.82 E-value=1.9e-05 Score=55.80 Aligned_cols=65 Identities=8% Similarity=0.114 Sum_probs=42.9
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc---CCCceee-cCCC--CCCCCeEEEEEEeCCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK---PNPAIFR-SHPQ--GRLPNSYNITWMVSSYTP 82 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~---P~p~~~~-~~~~--~~~~~~~~L~w~~~s~~p 82 (123)
+.|.|.+++.+|.|.|+|.|.|..+.......|... ..+|.+. ..+. ......+.|.|.+.+..|
T Consensus 77 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P 147 (231)
T 2w59_A 77 SAVPVSTQDWLSGERFTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRP 147 (231)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred EEEEecchhccCCCEEEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccC
Confidence 579999999999999999999998765555545321 1233322 1111 112356899999987543
No 401
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.82 E-value=1.4e-05 Score=52.90 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=26.6
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (123)
....|.|.+++.+|+|.|+|.|.|..|...
T Consensus 132 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 161 (170)
T 3ry4_A 132 LDPTFSIPQANHSHSGDYHCTGNIGYTLFS 161 (170)
T ss_dssp SCCEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCCeEEEEeccccCCEEEEEEEEeCcCccc
Confidence 356899999999999999999999999743
No 402
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.82 E-value=0.00018 Score=52.35 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=64.6
Q ss_pred EEEEEccc-CCCCCeeEEEEEEcCCceeEE-EEEEe----ccCCCceeecCC-CCCCCCeEEEEEEeCC--CCCCcceEE
Q psy17207 18 HTLMIRKV-VASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSHP-QGRLPNSYNITWMVSS--YTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~-~i~l~----~~P~p~~~~~~~-~~~~~~~~~L~w~~~s--~~pi~~y~v 88 (123)
..++|.++ .....=.+.|.|.|.+|.... .+.+. .+|.||...... .....+++.|.|.++. +.++..|.|
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 237 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 237 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEE
T ss_pred eEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEE
Confidence 45677777 444433456999999999763 23332 367777654322 2235689999999753 457999999
Q ss_pred EeEEcCCCCCCceeeeeccccccccceeeeeee
Q psy17207 89 KYRKIPGNEPSPMSNQLTGTNQYQNRRLVRKIT 121 (123)
Q Consensus 89 ~yr~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 121 (123)
+||... ...|..+...-.....+.+.+..|.
T Consensus 238 ~y~~~~--~~~w~~~~~~~~~~~~~~~~l~~L~ 268 (303)
T 1i1r_A 238 QYRTKD--ASTWSQIPPEDTASTRSSFTVQDLK 268 (303)
T ss_dssp EEEETT--CSSCEECCGGGGCSCCSEEEECSCC
T ss_pred EEEeCC--CCCceEEccccCCCceeEEEeCCCC
Confidence 999975 3678766543223334455555554
No 403
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=97.82 E-value=9.7e-05 Score=46.69 Aligned_cols=49 Identities=18% Similarity=0.313 Sum_probs=36.7
Q ss_pred CCCEEEE-EcCCEEEEEEcccCCCCCeeEEEEEEcCCceeE-EEEEEeccC
Q psy17207 6 TERRIME-TRGSRHTLMIRKVVASDFGNYSCEATNPMGKHR-AYLELSGKP 54 (123)
Q Consensus 6 d~R~~i~-~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~-~~i~l~~~P 54 (123)
.+|+++. .....-.|+|.+++.+|+|.|.|......+.+. ..+.|.+.|
T Consensus 55 ~~R~s~~~~~~~~~~L~I~~l~~~Dsg~Y~C~~~~~~~~d~~~~v~L~V~p 105 (106)
T 2frg_P 55 GRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILP 105 (106)
T ss_dssp TTTEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCEEEEcCCCCEEEEEEccCCHHHCEEEEEEeecCCCCCEeEEEEEEEeC
Confidence 4788874 234457899999999999999999887765543 456776654
No 404
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=97.82 E-value=3.7e-05 Score=54.21 Aligned_cols=74 Identities=16% Similarity=0.265 Sum_probs=47.1
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC-------CceeEEEEEEecc---CCCceeecCCCCCCCCeEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP-------MGKHRAYLELSGK---PNPAIFRSHPQGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~-------~G~~~~~i~l~~~---P~p~~~~~~~~~~~~~~~~L 73 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|... .+.|... +.|.++..... ...+.|
T Consensus 63 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~g~gt-~L~V~~~~~~~~P~V~~~~~~---~~~vtL 138 (211)
T 2ak4_D 63 SGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGFYNTDKLIFGTGT-RLQVFPNIQNPDPAVYQLRDS---KSSDKS 138 (211)
T ss_dssp ETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEECSBTTSCCEECCCE-EEEEECCCSSCCCEEEEEBCC---SSSCCE
T ss_pred CCCEEEEEcCCCCEEEEEECccccccCceEEEEEEcCCCcceeeECCCE-EEEEeCcCCCCCCEEEEccCC---CCceEE
Confidence 47888763 355678999999999999999999874 22221 3444432 33333332221 236789
Q ss_pred EEEeCCCCCC
Q psy17207 74 TWMVSSYTPL 83 (123)
Q Consensus 74 ~w~~~s~~pi 83 (123)
.|.+.+..|.
T Consensus 139 ~Cl~~gf~P~ 148 (211)
T 2ak4_D 139 VCLFTDFDSQ 148 (211)
T ss_dssp EEEEESCCTT
T ss_pred EEEeeeecCC
Confidence 9998765443
No 405
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.82 E-value=3.5e-05 Score=62.19 Aligned_cols=70 Identities=27% Similarity=0.269 Sum_probs=32.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec--cCCCceee---cCCCCCCCCeEEEEEEeCCCCCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG--KPNPAIFR---SHPQGRLPNSYNITWMVSSYTPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~--~P~p~~~~---~~~~~~~~~~~~L~w~~~s~~pi~~y~ 87 (123)
.+.|.|.+++.+|.|.|+|.|.|..|.....+.|.. .|...... .......+..+.|.|.+.++++. .+.
T Consensus 289 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-~v~ 363 (772)
T 3v2a_R 289 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPP-EIK 363 (772)
T ss_dssp EEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------------------
T ss_pred EEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCC-eEE
Confidence 468999999999999999999999998877665553 33322111 01112246788899998775443 344
No 406
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=97.81 E-value=3.1e-05 Score=49.33 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+++...+....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 65 TQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSN 99 (114)
T ss_dssp TTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred cccEEEEecCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 47888766566778999999999999999999875
No 407
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=97.81 E-value=5.8e-05 Score=53.28 Aligned_cols=75 Identities=17% Similarity=0.291 Sum_probs=47.3
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCC---ceeE----EEEEEec--c-CCCceeecCCCCCCCCeEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM---GKHR----AYLELSG--K-PNPAIFRSHPQGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~---G~~~----~~i~l~~--~-P~p~~~~~~~~~~~~~~~~L 73 (123)
.+||++.. .+....|+|++++.+|+|.|.|.+.+.. +... ..+.|.. . +.|..+...+. ...+.|
T Consensus 61 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~---~~~~tl 137 (210)
T 2eys_A 61 NGRYTATLDADTKQSSLHITASQLSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS---KSSDKS 137 (210)
T ss_dssp ETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCC---SSSSCE
T ss_pred CCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCCC---CCCceE
Confidence 57888763 3556799999999999999999998842 1111 1344443 2 22333332222 226789
Q ss_pred EEEeCCCCCC
Q psy17207 74 TWMVSSYTPL 83 (123)
Q Consensus 74 ~w~~~s~~pi 83 (123)
.|.+.++.|.
T Consensus 138 ~Cl~~gf~P~ 147 (210)
T 2eys_A 138 VCLFTDFDSQ 147 (210)
T ss_dssp EEEEESCCTT
T ss_pred EEEcccccCC
Confidence 9998765443
No 408
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=97.81 E-value=1.7e-05 Score=51.44 Aligned_cols=35 Identities=26% Similarity=0.236 Sum_probs=28.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ ....+|+|++++.+|+|.|.|.+.+.
T Consensus 74 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~ 110 (132)
T 1nko_A 74 RDRFHLLGDPQTKNCTLSIRDARMSDAGRYFFRMEKG 110 (132)
T ss_dssp TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEET
T ss_pred CccEEEeCCCCCCceEEEEcccCcccCeeEEEEEEcC
Confidence 478887532 34568999999999999999999875
No 409
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.81 E-value=3e-05 Score=50.48 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=23.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
...|+|.+++.+|+|.|.|.+.|..+
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~~~~~ 103 (136)
T 2d9c_A 78 DFSISISNITPADAGTYYCVKFRKGS 103 (136)
T ss_dssp BCCEEESSCCTTTCEEEEEEEEECCS
T ss_pred EEEEEECCCCHHHCEEEEEEEEeCCC
Confidence 56899999999999999999998653
No 410
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.80 E-value=2.1e-05 Score=55.86 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=32.6
Q ss_pred cCCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 5 TTERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 5 ~d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
.++|+.+...+....|+|.+++.+|+|.|+|.|.|..+
T Consensus 207 ~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 207 ISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp CCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred cCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 35788887777788999999999999999999999543
No 411
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.79 E-value=2.8e-05 Score=56.36 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+.+...+....|+|.+++.+|+|.|+|.+.|..
T Consensus 199 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 199 SERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 478888777778889999999999999999999986
No 412
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=97.79 E-value=4.2e-05 Score=50.41 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+++...+....|+|++++.+|+|.|.|.+.+..
T Consensus 64 ~~Rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 99 (137)
T 3bdb_A 64 DSRFSMTVNDQKFDLNIIGAREDDGGEYFCGEVEGI 99 (137)
T ss_dssp CTTEEEEESSSBEEEEEESCCSTTCEEEEEEEECSS
T ss_pred CCcEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 579988766677799999999999999999999864
No 413
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=97.79 E-value=2.6e-05 Score=54.69 Aligned_cols=74 Identities=15% Similarity=0.281 Sum_probs=44.8
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC-------CceeEEEEEEecc---CCCceeecCCCCCCCCeEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP-------MGKHRAYLELSGK---PNPAIFRSHPQGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~-------~G~~~~~i~l~~~---P~p~~~~~~~~~~~~~~~~L 73 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|... .+.|.+. +.|..+...+. ...+.|
T Consensus 56 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~~fg~gt-~L~V~~~~~~~~P~V~~~~~~---~~~~tl 131 (200)
T 2nw2_A 56 KGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRGT-SLIVHPYIQNPDPAVYQLRDS---KSSDKS 131 (200)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC---CCCCCEECCCE-EEEEECCCSSCCCEEEEEEEC---C--CCE
T ss_pred CCceEEEecCCCCEEEEEECccCcccCCcEEEEEEcCCcceeeeeCCCE-EEEEecCcccCCCeEEEcCCC---CCCceE
Confidence 57888753 355678999999999999999998761 22222 3444432 22333332111 226789
Q ss_pred EEEeCCCCCC
Q psy17207 74 TWMVSSYTPL 83 (123)
Q Consensus 74 ~w~~~s~~pi 83 (123)
.|.+.++.|.
T Consensus 132 ~Cl~~gf~P~ 141 (200)
T 2nw2_A 132 VCLFTDFDSQ 141 (200)
T ss_dssp EEEEESCCTT
T ss_pred EEEeecccCC
Confidence 9998766554
No 414
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.78 E-value=2.4e-05 Score=55.86 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=45.1
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeE--EEEEEe-ccCCCceeecCCCC---CCCCeEEEEEEeCC-CCCCcceE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELS-GKPNPAIFRSHPQG---RLPNSYNITWMVSS-YTPLEEFK 87 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~~i~l~-~~P~p~~~~~~~~~---~~~~~~~L~w~~~s-~~pi~~y~ 87 (123)
+.|.|.+++.+|.|.|+|.|.|..|... .++.+. ....+|.+...... ..+..+.|.|.+.+ +++...+.
T Consensus 82 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 158 (239)
T 1i1c_A 82 SELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTE 158 (239)
T ss_dssp EEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEE
Confidence 5899999999999999999999998643 344321 23334433321111 13567999999976 44433444
No 415
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=97.78 E-value=3.1e-05 Score=56.65 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=45.4
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCcee---EEEEEEec-cCCCceeecC-CCCCCCCeEEEEEEeCCC-CCCcceEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKH---RAYLELSG-KPNPAIFRSH-PQGRLPNSYNITWMVSSY-TPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~---~~~i~l~~-~P~p~~~~~~-~~~~~~~~~~L~w~~~s~-~pi~~y~v 88 (123)
+.|.|......|.|.|+|.|.|..|.. ..+..+.. ...||.+... .....+..+.|.|.+.+. +|...+.|
T Consensus 180 s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W 256 (327)
T 2wng_A 180 STAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTW 256 (327)
T ss_dssp EEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEE
T ss_pred EEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEE
Confidence 468898888888999999999998873 33444432 2333433321 112357889999999874 44334553
No 416
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.77 E-value=2.2e-05 Score=57.65 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=44.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEe--cc-CCCceeecCCC---CCCCCeEEEEEEeCCCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELS--GK-PNPAIFRSHPQ---GRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~--~~-P~p~~~~~~~~---~~~~~~~~L~w~~~s~~pi 83 (123)
+.|.|......|.|.|+|.|.|..|.....+.+. .. ..|..+...+. ...+..+.|.|.+.+.+|.
T Consensus 72 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~ 143 (323)
T 2wqr_A 72 SELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPS 143 (323)
T ss_dssp EEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCC
T ss_pred EEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCC
Confidence 4688998888899999999999998877765431 11 12223232221 1247789999998776543
No 417
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.77 E-value=3.7e-06 Score=58.57 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=28.8
Q ss_pred EEEEEEccc-CCCCCeeEEEEEEcCCcee-EEEEEEe
Q psy17207 17 RHTLMIRKV-VASDFGNYSCEATNPMGKH-RAYLELS 51 (123)
Q Consensus 17 ~~~L~I~~v-~~~D~G~YtC~A~N~~G~~-~~~i~l~ 51 (123)
.+.|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.
T Consensus 165 ~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 165 EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 358999999 9999999999999999973 3445443
No 418
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.76 E-value=3.8e-05 Score=54.26 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=31.9
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC--CceeE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP--MGKHR 45 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~ 45 (123)
++|+.+.. .+....|+|.+++.+|+|.|+|.|.|. +|...
T Consensus 186 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~gt 229 (242)
T 2znx_A 186 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQGT 229 (242)
T ss_dssp TTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCCE
T ss_pred cCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCCe
Confidence 57888764 345679999999999999999999994 44443
No 419
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=97.76 E-value=7.1e-05 Score=54.02 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=27.5
Q ss_pred CCCEEEEEcC--CEEEEEEcccCCCCCeeEEEEEE
Q psy17207 6 TERRIMETRG--SRHTLMIRKVVASDFGNYSCEAT 38 (123)
Q Consensus 6 d~R~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~ 38 (123)
.+|+++..+. ....|+|++++.+|+|.|.|.+.
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 88 QGRVTITRDSGASTVYMELRGLTADDTAIYYCLTG 122 (267)
T ss_dssp TTTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEEC
Confidence 4789886433 45679999999999999999997
No 420
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=97.76 E-value=2.6e-05 Score=49.95 Aligned_cols=35 Identities=34% Similarity=0.515 Sum_probs=28.8
Q ss_pred EEEEEEcccCCCCCeeEEEEEE-cCCceeEEEEEEe
Q psy17207 17 RHTLMIRKVVASDFGNYSCEAT-NPMGKHRAYLELS 51 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~-N~~G~~~~~i~l~ 51 (123)
...|.|.+++.+|+|.|+|.+. +..|.....+.|.
T Consensus 92 ~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~ 127 (128)
T 3r0n_A 92 DATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLR 127 (128)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEE
Confidence 4589999999999999999654 4678888777664
No 421
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=97.75 E-value=0.0003 Score=48.45 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=64.1
Q ss_pred EEEEEccc-CCCCCeeEEEEEEcCCceeEE-EEEEe----ccCCCceeecCC-CCCCCCeEEEEEEeCC--CCCCcceEE
Q psy17207 18 HTLMIRKV-VASDFGNYSCEATNPMGKHRA-YLELS----GKPNPAIFRSHP-QGRLPNSYNITWMVSS--YTPLEEFKI 88 (123)
Q Consensus 18 ~~L~I~~v-~~~D~G~YtC~A~N~~G~~~~-~i~l~----~~P~p~~~~~~~-~~~~~~~~~L~w~~~s--~~pi~~y~v 88 (123)
..+.|.++ .....=.+.+.|.|..|.... .+.+. ..|.||...... .....+++.|.|..+. +.++..|.|
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 141 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 141 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEE
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEE
Confidence 45677777 555555667899999999763 22232 357777544321 2225689999999653 457899999
Q ss_pred EeEEcCCCCCCceeeeeccccccccceeeeeee
Q psy17207 89 KYRKIPGNEPSPMSNQLTGTNQYQNRRLVRKIT 121 (123)
Q Consensus 89 ~yr~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 121 (123)
+|+... ...|..+.........+.+.+..|.
T Consensus 142 ~y~~~~--~~~~~~~~~~~~~~~~~~~~i~~L~ 172 (215)
T 1bqu_A 142 QYRTKD--ASTWSQIPPEDTASTRSSFTVQDLK 172 (215)
T ss_dssp EEEETT--CSSCEECCGGGGCSCCSEEEECSCC
T ss_pred EEccCC--CCCceEeccccccCccceEEeCCCC
Confidence 999875 3568766542223334455555544
No 422
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=97.75 E-value=5.8e-05 Score=47.84 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=30.5
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+.+.. .+....|+|.+++.+|+|.|.|.+.+..|
T Consensus 62 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~ 100 (114)
T 1u9k_A 62 MGKFTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHPPN 100 (114)
T ss_dssp ETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred CCcEEEEecCcCCEEEEEECCCChHHCEEEEEEEecCCC
Confidence 47888764 34567899999999999999999998654
No 423
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.94 E-value=3.9e-06 Score=53.02 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=29.9
Q ss_pred cCCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 5 TTERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 5 ~d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.++|+.+.. .+....|+|.+++.+|+|.|.|.+.|..
T Consensus 56 ~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 94 (110)
T 1u3h_A 56 EDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAASANS 94 (110)
Confidence 457887754 3445689999999999999999999853
No 424
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=97.74 E-value=1.6e-05 Score=55.37 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=46.6
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC--------CceeEEEEEEec--c-CCCceeecCCCCCCCCeEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP--------MGKHRAYLELSG--K-PNPAIFRSHPQGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~--------~G~~~~~i~l~~--~-P~p~~~~~~~~~~~~~~~~ 72 (123)
.+|+++.. .+....|+|.+++.+|+|.|.|.+.+. +|.. ..+.|.. . |.|.++...+. ...+.
T Consensus 59 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~g~g-t~L~V~~~~~~~~P~V~~~~~~---~~~~t 134 (194)
T 1lp9_E 59 HQGFHATLHKSSSSFHLQKSSAQLSDSALYYCALFLASSSFSKLVFGQG-TSLSVVPNIQNPEPAVYQLKDP---RSQDS 134 (194)
T ss_dssp CSSCEECCBGGGTBCCEEESSCCGGGCEEEEEEEEECSSSSCEEEECCC-EEEEEECCCSSCCCEEEEEECT---TSSSC
T ss_pred CCCeEEEecCCCCEEEEEEcccCcccCeeEEEEEecccCCcceeeeccC-ceEEecCcCCCCCCeeEecCCC---CCCcE
Confidence 57888752 234568999999999999999999873 1211 2344443 2 33333332221 23678
Q ss_pred EEEEeCCCCCCc
Q psy17207 73 ITWMVSSYTPLE 84 (123)
Q Consensus 73 L~w~~~s~~pi~ 84 (123)
|.|.+.++.|..
T Consensus 135 L~Cl~~gf~P~~ 146 (194)
T 1lp9_E 135 TLCLFTDFDSQI 146 (194)
T ss_dssp EEEEEESCCTTS
T ss_pred EEEEeecccCCc
Confidence 999987754443
No 425
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.74 E-value=0.00012 Score=52.00 Aligned_cols=35 Identities=17% Similarity=0.175 Sum_probs=30.1
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+++.. .+....|+|.+++.+|+|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 61 KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTL 97 (229)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECC
T ss_pred CCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecC
Confidence 57998864 355678999999999999999999986
No 426
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.74 E-value=3e-05 Score=52.04 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+++........|+|.+++.+|+|.|.|.+.|..
T Consensus 74 ~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 109 (146)
T 2yc1_B 74 PARFTGSGSGTDFTLTISSLEPEDFAIYYCQQYRYS 109 (146)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSS
T ss_pred CCCeEEecCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 479988766667889999999999999999999863
No 427
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.73 E-value=1.9e-05 Score=50.03 Aligned_cols=33 Identities=9% Similarity=0.071 Sum_probs=27.0
Q ss_pred CCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+++...... .|+|++++.+|+|.|.|.+.+.
T Consensus 64 ~Rf~~~~~~~~-~L~I~~~~~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 64 ADYLATRVTDT-ELRLQVANMSQGRTLYCTCSAD 96 (112)
T ss_dssp EEEEEEEEETT-EEEEEEESCCSCEEEEEEEESS
T ss_pred CCEEEEcCCCC-eEEEcCCCHhHCEEEEEEEEcC
Confidence 68877643333 8999999999999999999864
No 428
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=97.73 E-value=2.7e-05 Score=53.84 Aligned_cols=41 Identities=10% Similarity=0.016 Sum_probs=35.8
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCc
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPA 57 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~ 57 (123)
.+.|.|.++...|.|.|+|.|.|..+.....+.|...|..+
T Consensus 175 ~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~~~~~ 215 (221)
T 3eow_R 175 TSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTVYYP 215 (221)
T ss_dssp EEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCCCCC-
T ss_pred EEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEEEEcc
Confidence 46899999999999999999999999999998888766544
No 429
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=97.73 E-value=0.00012 Score=46.54 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+++.. .+....|+|.+++.+|+|.|.|.+.+..+
T Consensus 59 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~ 97 (117)
T 3bp6_A 59 DARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHP 97 (117)
T ss_dssp CTTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECSS
T ss_pred cCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEecCC
Confidence 57998864 45677899999999999999999987654
No 430
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.72 E-value=4.1e-05 Score=55.79 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+...+....|+|.+++.+|+|.|+|.|.|..
T Consensus 223 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 223 PDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 578887766677899999999999999999999964
No 431
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=97.72 E-value=0.0001 Score=58.56 Aligned_cols=78 Identities=9% Similarity=-0.043 Sum_probs=53.9
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEeccCCCceeecCCCCCCCCeEEEEEEeCCC-----CCCcceEEE
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGKPNPAIFRSHPQGRLPNSYNITWMVSSY-----TPLEEFKIK 89 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~s~-----~pi~~y~v~ 89 (123)
+..+.|+|.++...|.|.|.|++.+........+.+..+|.+|....-. ......+.++|.++.. .++..|.|.
T Consensus 248 ~~~~~L~I~nl~~sd~g~y~~~C~~~~~i~~~~l~v~~pP~~P~nl~C~-~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~ 326 (488)
T 2q7n_A 248 GQTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCE-THDLKEIICSWNPGRITGLVGPRNTEYTLF 326 (488)
T ss_dssp SSCEEEECCSCCCCCSSCEEEEEEESSCEEEEEEEEECCCCCCCSCEEE-BSSSSEEEEEECCCSCCCCCTTSSCEEEEE
T ss_pred ceEEEEEEeCCCcccCCcEEEEEEcCCeEEEEEEEeeCCCCCCcccEEE-EcCCCEEEEEEeCCCcCCCCCCCceeEEEE
Confidence 4567899999999999999998885333333445555677766533211 1246789999997532 478899999
Q ss_pred eEEc
Q psy17207 90 YRKI 93 (123)
Q Consensus 90 yr~~ 93 (123)
|+..
T Consensus 327 y~~~ 330 (488)
T 2q7n_A 327 ESIS 330 (488)
T ss_dssp ETTT
T ss_pred EEEC
Confidence 9754
No 432
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=97.72 E-value=4.7e-05 Score=49.43 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+++...+....|+|.+++.+|+|.|.|.+.+..
T Consensus 60 ~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 60 PDRFSGSKSGTSASLAISGLRSEDEADYYCLSWDDS 95 (123)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cCCEEEEccCCEEEEEECCCCHHHCEEEEEEEEcCC
Confidence 479988766678899999999999999999998864
No 433
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=97.72 E-value=1.7e-05 Score=55.19 Aligned_cols=71 Identities=17% Similarity=0.111 Sum_probs=45.2
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE--EEEEEeccCCCceee-cCCC---CCCCCeEEEEEEeCCC-CCCcceE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR--AYLELSGKPNPAIFR-SHPQ---GRLPNSYNITWMVSSY-TPLEEFK 87 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~--~~i~l~~~P~p~~~~-~~~~---~~~~~~~~L~w~~~s~-~pi~~y~ 87 (123)
...|.|.+++..|.|.|+|.|.|..+... ..+.+.....+|.+. ..+. ...+..+.|.|.+.+. ++...+.
T Consensus 65 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 142 (214)
T 1ow0_A 65 SSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVR 142 (214)
T ss_dssp EEECTTTHHHHHHTCEEEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEE
T ss_pred EEEEEEeHHHcCCCCeEEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEE
Confidence 45799999999999999999999987543 333221233444432 2111 1245679999999774 4333444
No 434
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.72 E-value=4.1e-06 Score=56.87 Aligned_cols=31 Identities=39% Similarity=0.589 Sum_probs=27.9
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
..+.|.|.+++.+|.|.|+|.|.|.+|....
T Consensus 169 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 199 (209)
T 1nbq_A 169 TTGELVFDPLSASDTGEYSCEARNGYGTPMT 199 (209)
T ss_dssp TTCCEEESSCCGGGCCCEEEEEECSSSCCEE
T ss_pred CcceEEEEeccccCCeEEEEEEeCCcCcccc
Confidence 3468999999999999999999999999844
No 435
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.72 E-value=3.6e-05 Score=54.15 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=30.0
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+.+.. .+....|+|.+++.+|+|.|+|.|.|.
T Consensus 192 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 192 KGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred cCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 57888764 355789999999999999999999995
No 436
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=97.72 E-value=3.7e-05 Score=51.30 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=27.9
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEEEe
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS 51 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~l~ 51 (123)
....|.|.++ +|+|.|+|.|.|.+|.... ++.|.
T Consensus 146 ~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~ 180 (182)
T 1rhf_A 146 SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVH 180 (182)
T ss_dssp SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEE
T ss_pred CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEE
Confidence 4578999998 5999999999999999864 55543
No 437
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.71 E-value=1.3e-05 Score=57.01 Aligned_cols=69 Identities=13% Similarity=0.034 Sum_probs=44.5
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcC-CceeE---EEE--EEeccCCCceeecCC--CCCCCCeEEEEEEeCCCCCC
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNP-MGKHR---AYL--ELSGKPNPAIFRSHP--QGRLPNSYNITWMVSSYTPL 83 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~-~G~~~---~~i--~l~~~P~p~~~~~~~--~~~~~~~~~L~w~~~s~~pi 83 (123)
+..+.|.|..+...|.|.|+|.|.|. .|... ..+ .|...|......... ....+..+.|.|.+.+.++.
T Consensus 139 ~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p 215 (265)
T 2oz4_A 139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLP 215 (265)
T ss_dssp SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCC
T ss_pred CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCC
Confidence 34678999999999999999999854 47765 444 444444332111100 11247788899988776554
No 438
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.71 E-value=4.5e-05 Score=48.43 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=29.4
Q ss_pred cCCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 5 TTERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 5 ~d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.++|+.+.. ......|+|.+++.+|+|.|.|.+.|.
T Consensus 51 ~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 88 (113)
T 1sq2_N 51 KGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGVA 88 (113)
T ss_dssp CBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECBT
T ss_pred eCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 357887653 245678999999999999999999984
No 439
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=97.71 E-value=4.3e-05 Score=51.06 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+++........|+|.+++.+|+|.|.|.+.+..
T Consensus 58 ~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~~~~ 93 (143)
T 3u6r_L 58 PARFSGSGSGTDFTLTISNLEPEDFAVYYCQQRSDW 93 (143)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECSSB
T ss_pred cCcEeEEccCCEEEEEEccCcccCCEEEEEEEecCC
Confidence 579988766678899999999999999999998864
No 440
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=97.70 E-value=0.00011 Score=47.23 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=29.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|.+++.+|+|.|.|.+.+.
T Consensus 67 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 103 (124)
T 1dlf_H 67 KGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCTGIYY 103 (124)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEBT
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 479988753 45778999999999999999999874
No 441
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.69 E-value=4.5e-05 Score=53.93 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=30.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
++|+.+... +....|+|.+++.+|+|.|+|.|.|..
T Consensus 199 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 199 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 358887654 456789999999999999999999964
No 442
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.69 E-value=3.9e-05 Score=48.72 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=29.3
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
++|+.+. ..+....|+|++++.+|+|.|.|.+.+.
T Consensus 60 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 96 (116)
T 1fo0_A 60 VGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRGD 96 (116)
T ss_dssp ETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 4788874 3455778999999999999999999873
No 443
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.69 E-value=3.2e-05 Score=48.95 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=29.1
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEc
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATN 39 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N 39 (123)
.+|+.+.. .+....|+|.+++.+|+|.|.|.+.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 100 (115)
T 2atp_B 65 KKRNIILESSDSRRPFLSIMNVKPEDSDFYFCATVG 100 (115)
T ss_dssp TTCCEEEESTTSSSCEEEECSCCGGGCEEEEEEEEC
T ss_pred cCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEcc
Confidence 57998876 45567899999999999999999876
No 444
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.69 E-value=3e-05 Score=51.98 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=25.1
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHR 45 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~ 45 (123)
...|.|.+++.+|+|.|+|.|.|..|...
T Consensus 136 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 164 (175)
T 1fnl_A 136 NSDFHIPKATLKDSGSYFCRGLVGSKNVS 164 (175)
T ss_dssp CCCEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCEEEEcccChhhCeEEEEEEEcCCCCcc
Confidence 45799999999999999999999766533
No 445
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=97.68 E-value=0.00011 Score=51.97 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=47.4
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC----CceeEEEEEEec---cCCCceeecCCCCCCCCeEEEEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP----MGKHRAYLELSG---KPNPAIFRSHPQGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~----~G~~~~~i~l~~---~P~p~~~~~~~~~~~~~~~~L~w~ 76 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+... +|... .+.|.. .|.|.++...+. ..++.|.|.
T Consensus 58 ~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~~~~fG~GT-~L~V~~~~~~~~P~V~~~~~~---~~~~tl~Cl 133 (200)
T 3rgv_A 58 SRGFEATYDKGTTSFHLQKTSVQEIDSAVYYCAANSGTYQRFGTGT-KLQVVPNIQNPDPAVYQLRDS---KSSDKSVCL 133 (200)
T ss_dssp ETTEEEECBTTTTBCCEEESSCCSTTCEEEEEEEESSSCCCCCCCE-EEEEECCCSSCCCEEEEEEES---SSSSCEEEE
T ss_pred CCceEEEECCCCCEEEEEEcCCcCccCCCEEEEeccCcccccCcCE-EEEEeCCCCCCCCeEEEccCC---CCCceEEEE
Confidence 47888763 345678999999999999999998742 33332 334443 233444332111 233679999
Q ss_pred eCCCCCCc
Q psy17207 77 VSSYTPLE 84 (123)
Q Consensus 77 ~~s~~pi~ 84 (123)
+.+..|..
T Consensus 134 ~~gf~P~i 141 (200)
T 3rgv_A 134 FTDFDSQT 141 (200)
T ss_dssp EESCCTTC
T ss_pred cccccCCe
Confidence 87766633
No 446
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.68 E-value=4.1e-05 Score=50.11 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=32.0
Q ss_pred ccCCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 4 ETTERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 4 ~~d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
..++||.+.. ......|+|.+++.+|+|.|.|.+.|..+.
T Consensus 50 ~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~ 91 (126)
T 3moq_A 50 SIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYVFFA 91 (126)
T ss_dssp CCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEEET
T ss_pred EeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEcCCC
Confidence 3457887753 245788999999999999999999987654
No 447
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=97.68 E-value=0.00012 Score=51.84 Aligned_cols=75 Identities=17% Similarity=0.315 Sum_probs=46.8
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCceeE----EEEEEecc---CCCceeecCCCCCCCCeEEEEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMGKHR----AYLELSGK---PNPAIFRSHPQGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~----~~i~l~~~---P~p~~~~~~~~~~~~~~~~L~w~ 76 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+..+... ..+.|... +.|.++...+ ....+.|.|.
T Consensus 58 ~~Rfs~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~---~~~~vtL~C~ 134 (215)
T 1oga_D 58 LKRLTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQGNLIFGKGTKLSVKPNIQNPDPAVYQLRD---SKSSDKSVCL 134 (215)
T ss_dssp ETTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEECTTSSEEECCCEEEEEECCCSSCCCEEEEEEB---SSSSSCEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEecccccceeCCCEEEEEeccCCCcCCEEEEcCC---CCCCeEEEEE
Confidence 47888763 34567899999999999999999986422111 23444432 2233332111 1236789999
Q ss_pred eCCCCCC
Q psy17207 77 VSSYTPL 83 (123)
Q Consensus 77 ~~s~~pi 83 (123)
+.+..|.
T Consensus 135 ~~gf~P~ 141 (215)
T 1oga_D 135 FTDFDSQ 141 (215)
T ss_dssp EESCCTT
T ss_pred ccccccC
Confidence 8765443
No 448
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.68 E-value=4.6e-05 Score=55.17 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++||.+...+....|+|.+++.+|+|.|+|.|.|..+
T Consensus 219 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 255 (282)
T 1qok_A 219 PARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYP 255 (282)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred cCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCC
Confidence 5788887666788999999999999999999998643
No 449
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=97.68 E-value=5.8e-05 Score=49.80 Aligned_cols=36 Identities=19% Similarity=0.141 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+.+........|+|++++.+|+|.|.|.+.+..
T Consensus 66 ~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 101 (135)
T 1p4b_L 66 PARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSN 101 (135)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred CCCEEEEcCCCEEEEEECCCChhHCEEEEEEEecCC
Confidence 479988765667899999999999999999998753
No 450
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=97.66 E-value=0.00012 Score=52.72 Aligned_cols=75 Identities=19% Similarity=0.327 Sum_probs=47.7
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCC-------ceeEEEEEEec---cCCCceeecCCCCCCCCeEEE
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPM-------GKHRAYLELSG---KPNPAIFRSHPQGRLPNSYNI 73 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~-------G~~~~~i~l~~---~P~p~~~~~~~~~~~~~~~~L 73 (123)
.+|+++. ..+....|+|++++.+|+|.|.|.+.... |.. ..+.|.. .|.|..+...+. ...+.|
T Consensus 56 ~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y~Ca~~~~~~~~~~~fG~G-T~L~V~~~~~~p~P~Vf~~~~~---~~~vtl 131 (229)
T 3mbe_C 56 NGRLKSTFNSKERYSTLHIKDAQLEDSGTYFCAAEDGGSGNKLIFGTG-TLLSVKPNIQNPEPAVYQLKDP---RSQDST 131 (229)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCSTTCBEEEEEEECSSSTTCEEECCC-CEEEEECCCSSCCCEEEEEECT---TCTTCE
T ss_pred CCCEEEEECCCCCEEEEEEECCcccCCCCEEEEEEeCCCcccceeCCC-EEEEEecccCCCCCEEEEccCC---CCCEEE
Confidence 4788876 34567899999999999999999998532 111 1344443 233333332111 234789
Q ss_pred EEEeCCCCCCc
Q psy17207 74 TWMVSSYTPLE 84 (123)
Q Consensus 74 ~w~~~s~~pi~ 84 (123)
.|.+.++.|..
T Consensus 132 ~Cl~~gf~P~i 142 (229)
T 3mbe_C 132 LCLFTDFDSQI 142 (229)
T ss_dssp EEEEESCCSSS
T ss_pred EEEccccCCce
Confidence 99988766643
No 451
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.65 E-value=2.5e-05 Score=49.43 Aligned_cols=36 Identities=19% Similarity=0.144 Sum_probs=29.0
Q ss_pred CCCEEEEEcC--CEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 6 TERRIMETRG--SRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 6 d~R~~i~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
.+|+.+.... ....|+|++++.+|+|.|.|.+.+..
T Consensus 63 ~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~~ 100 (116)
T 3bj9_1 63 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGARS 100 (116)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSS
T ss_pred CCcEEEEecCCCceEEEEECCCChhHCEEEEEEEeCCC
Confidence 4788876433 34589999999999999999998753
No 452
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=97.64 E-value=7.3e-05 Score=47.71 Aligned_cols=35 Identities=9% Similarity=0.199 Sum_probs=29.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 1mfa_H 65 RAKTKLTAVTSTTTAYMELSSLTSEDSAVYYCTRGGH 101 (120)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 369988743 55678999999999999999999876
No 453
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=97.64 E-value=7e-05 Score=47.41 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=33.8
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC--CceeEEEEEEeccC
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP--MGKHRAYLELSGKP 54 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~--~G~~~~~i~l~~~P 54 (123)
+.|+.+.. ......|+|.+++.+|+|.|.|..... +......+.|.+.|
T Consensus 59 ~~r~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~v~~~~~~~~~~~~v~L~V~~ 111 (116)
T 3bia_X 59 STKYTLLGKVQFGEVSLTISNTNRGDSGVYCCRIEVPGWFNDVKKNVRLELRR 111 (116)
T ss_dssp STTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEECSSSSCCEEEEEEEEEEC
T ss_pred CceEEEeccCCCCEEEEEEccCChhHCEEEEEEEEcCCcccceEEEEEEEEec
Confidence 35777642 234557999999999999999998853 22334556666544
No 454
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=97.64 E-value=0.00027 Score=48.53 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=56.6
Q ss_pred EEEEcccCCCCCeeEEEEEEcCCceeEEE--EEEec----cCCCceeecCCCCCCCCeEEEEEEeC--CCCCCcceEEEe
Q psy17207 19 TLMIRKVVASDFGNYSCEATNPMGKHRAY--LELSG----KPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKY 90 (123)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~~~~--i~l~~----~P~p~~~~~~~~~~~~~~~~L~w~~~--s~~pi~~y~v~y 90 (123)
.++|.++.....-.|.+.|.|..|....+ +.+.- .|.+|.... ......+++.|.|.++ .+.+|..|.|+|
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~-~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~ 147 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEG-QMGEDGNSIKVNLIKQDDGGSPIRHYLVRY 147 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEE-EECTTSSCEEEEEECCCCTTSCCCEEEEEE
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccc-cccccCCeEEEEEECcccCCCCCceEEEEE
Confidence 67889998888888899999999976542 22321 355554432 1223578999999986 567999999999
Q ss_pred EEcCCCCCCcee
Q psy17207 91 RKIPGNEPSPMS 102 (123)
Q Consensus 91 r~~~~~~~~w~~ 102 (123)
+. ....|..
T Consensus 148 ~~---~~~~~~~ 156 (209)
T 2vkw_A 148 RA---LSSEWKP 156 (209)
T ss_dssp EE---TTSCCCC
T ss_pred EC---CCCCCce
Confidence 98 2345654
No 455
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=97.64 E-value=4.8e-05 Score=48.10 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=28.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEc
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATN 39 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N 39 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.|
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 64 KGRFTISRDNAKKTVYLEMNSLEPEDTAVYYCYTHY 99 (114)
T ss_dssp TTCEEEEECTTTCCEEEEECSCCGGGCSEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEEc
Confidence 478988753 4467899999999999999999987
No 456
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=97.64 E-value=7.6e-05 Score=47.30 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=29.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (117)
T 2yc1_A 65 KGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV 101 (117)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 469988643 55778999999999999999999875
No 457
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=97.64 E-value=6.8e-05 Score=47.80 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=29.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 65 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGG 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCeEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 368988643 45678999999999999999999875
No 458
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.63 E-value=6.2e-05 Score=51.66 Aligned_cols=33 Identities=9% Similarity=0.000 Sum_probs=27.2
Q ss_pred EEcccCCCCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 21 MIRKVVASDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 21 ~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
.+..+...|.|.|+|.|.|.+|....++.|...
T Consensus 178 ~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 178 STLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred EEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 333556799999999999999999998887754
No 459
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.63 E-value=0.00016 Score=46.17 Aligned_cols=52 Identities=12% Similarity=0.104 Sum_probs=37.8
Q ss_pred CCCeEEEEEEeC--CCCCCcceEEEeEEcCCCCCCceeeeeccccccccceeeeeeec
Q psy17207 67 LPNSYNITWMVS--SYTPLEEFKIKYRKIPGNEPSPMSNQLTGTNQYQNRRLVRKITE 122 (123)
Q Consensus 67 ~~~~~~L~w~~~--s~~pi~~y~v~yr~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (123)
..+++.|.|.++ ++.+|..|.|+||.. ...|..+... .....+.+.|++|.+
T Consensus 19 ~~~sv~L~W~pP~~~~~~I~gY~vey~~~---~~~W~~~~~~-~~~~~t~~~v~~L~p 72 (108)
T 1v5j_A 19 TPRGVLLHWDPPELVPKRLDGYVLEGRQG---SQGWEVLDPA-VAGTETELLVPGLIK 72 (108)
T ss_dssp CSSSEEEEEECCSCCSSCCCBEEEEEEET---TCCCEEEEEE-ECSSCCEEECCCCCT
T ss_pred eCCEEEEEECCCCCCCCCCcEEEEEEEeC---CCCcEEeeee-cCCCcCEEEeCCCCC
Confidence 357899999975 568999999999983 3679876644 234556677777654
No 460
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.63 E-value=2.3e-05 Score=53.16 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=27.6
Q ss_pred EEEcccCCCCCeeEEEEEEcCCceeEEEEEEe
Q psy17207 20 LMIRKVVASDFGNYSCEATNPMGKHRAYLELS 51 (123)
Q Consensus 20 L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~ 51 (123)
+.|.++..+|+|.|+|.|.|.+|...+...|.
T Consensus 142 ~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 142 KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 56778889999999999999999998876553
No 461
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.63 E-value=8.1e-05 Score=47.65 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=29.6
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (121)
T 1kxv_C 64 AGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSLR 100 (121)
T ss_dssp BTTEEEEECSSTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEec
Confidence 368988753 45678999999999999999999875
No 462
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.62 E-value=0.0001 Score=56.56 Aligned_cols=64 Identities=9% Similarity=0.120 Sum_probs=42.9
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEecc--C--------------CCcee-ecCCC----CCCCCeEEEEEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSGK--P--------------NPAIF-RSHPQ----GRLPNSYNITWM 76 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~~--P--------------~p~~~-~~~~~----~~~~~~~~L~w~ 76 (123)
+.|.|.++...| |.|+|.|.|..|.......|... + .+|.+ ...+. ...+..+.|.|.
T Consensus 194 s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~ 272 (457)
T 1hzh_H 194 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCV 272 (457)
T ss_dssp EEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEE
T ss_pred EEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEE
Confidence 479999999999 99999999998886654443311 1 12322 22211 123778999999
Q ss_pred eCCCCC
Q psy17207 77 VSSYTP 82 (123)
Q Consensus 77 ~~s~~p 82 (123)
+.+.+|
T Consensus 273 ~~g~~p 278 (457)
T 1hzh_H 273 VVDVSH 278 (457)
T ss_dssp EECCCT
T ss_pred EEcccC
Confidence 987654
No 463
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=97.62 E-value=0.00026 Score=46.37 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=30.8
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcCCc
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNPMG 42 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~G 42 (123)
++|+.+.. .+....|+|++++.+|+|.|.|.+.+..+
T Consensus 69 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~ 107 (134)
T 3bik_B 69 DARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHP 107 (134)
T ss_dssp CTTEEEEECTTSSEEEEEECSCCGGGCEEEEEEEEECSS
T ss_pred CCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 57998863 45577899999999999999999987643
No 464
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.61 E-value=3.6e-05 Score=52.48 Aligned_cols=27 Identities=11% Similarity=-0.004 Sum_probs=24.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCce
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGK 43 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~ 43 (123)
.+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 155 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 155 QALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred eeEEEeeecCcccCeeEEEEEEccCCC
Confidence 478999999999999999999998653
No 465
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.61 E-value=0.00033 Score=55.03 Aligned_cols=70 Identities=13% Similarity=0.125 Sum_probs=45.2
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCcee-EEEEEEe-cc--CCCceeecCCCCCCCCeEE-EEEEeCCC-CCCcceE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKH-RAYLELS-GK--PNPAIFRSHPQGRLPNSYN-ITWMVSSY-TPLEEFK 87 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~-~~~i~l~-~~--P~p~~~~~~~~~~~~~~~~-L~w~~~s~-~pi~~y~ 87 (123)
+.|.|..+...|.|.|+|.|.|..+.. ...+.+. +. +.+|.+...+.......+. |.|.+.+. +|...+.
T Consensus 361 s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~ 436 (512)
T 1zvo_C 361 SRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLM 436 (512)
T ss_pred EEEEEchHHhcCCCeEEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEE
Confidence 579999999999999999999998865 3444332 22 3344333211111466788 99999874 4433334
No 466
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=97.60 E-value=4.6e-05 Score=52.55 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=39.0
Q ss_pred EEEEcccCCCCCeeEEEEEEcCCcee--EEEEEEe-ccCCCceeec-CCC--CCCCCeEEEEEEeCCC-CCCcceE
Q psy17207 19 TLMIRKVVASDFGNYSCEATNPMGKH--RAYLELS-GKPNPAIFRS-HPQ--GRLPNSYNITWMVSSY-TPLEEFK 87 (123)
Q Consensus 19 ~L~I~~v~~~D~G~YtC~A~N~~G~~--~~~i~l~-~~P~p~~~~~-~~~--~~~~~~~~L~w~~~s~-~pi~~y~ 87 (123)
.|.|......|.|.|+|.|.|..|.. ..++.+. ....+|.+.. ... ......+.|.|.+.+. ++...+.
T Consensus 69 ~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~ 144 (207)
T 1l6x_A 69 VLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVE 144 (207)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEE
Confidence 34444444455999999999999875 3344331 2233343321 111 1134569999999774 4323444
No 467
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=96.76 E-value=8.8e-06 Score=56.76 Aligned_cols=75 Identities=16% Similarity=0.260 Sum_probs=45.4
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC---CceeEEEEEEec--cCC-CceeecCCCCCCCCeEEEEEEe
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP---MGKHRAYLELSG--KPN-PAIFRSHPQGRLPNSYNITWMV 77 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~---~G~~~~~i~l~~--~P~-p~~~~~~~~~~~~~~~~L~w~~ 77 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|... .+.|.. .|. |.++...+ ....+.|.|.+
T Consensus 58 ~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~fg~gT-~L~V~~~~~~~~P~V~~~~~---~~~~vtL~C~~ 133 (185)
T 3c6l_A 58 DGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGT-QLVVKPNIQNPEPAVYQLKD---PRSQDSTLCLF 133 (185)
Confidence 46887753 234568999999999999999999862 33221 333332 222 22222111 12378899998
Q ss_pred CCCCCCc
Q psy17207 78 SSYTPLE 84 (123)
Q Consensus 78 ~s~~pi~ 84 (123)
.+..|..
T Consensus 134 ~gf~P~p 140 (185)
T 3c6l_A 134 TDFDSQI 140 (185)
Confidence 7765543
No 468
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=97.59 E-value=8.7e-05 Score=47.30 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=29.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ .....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 65 KGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcc
Confidence 368988643 45678999999999999999999875
No 469
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=97.58 E-value=6.8e-05 Score=47.59 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=29.0
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (116)
T 1a2y_B 65 SRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD 100 (116)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 68887642 55778999999999999999999976
No 470
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=97.58 E-value=8.9e-05 Score=47.38 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+.+..+ .....|+|++++.+|+|.|.|.+.+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 66 GKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 101 (121)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEBT
T ss_pred CcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 68887642 45678999999999999999999875
No 471
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=97.57 E-value=4.3e-05 Score=52.95 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=29.1
Q ss_pred CEEEEEEcccCCCCCeeEEEEEEcCCceeEE-EEEEe
Q psy17207 16 SRHTLMIRKVVASDFGNYSCEATNPMGKHRA-YLELS 51 (123)
Q Consensus 16 ~~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~-~i~l~ 51 (123)
....|.|.+++.+|+|.|+|.|.|..|.... .+.|.
T Consensus 163 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 199 (218)
T 3k0w_A 163 TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 199 (218)
T ss_dssp CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEE
T ss_pred CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEE
Confidence 3458999999999999999999999998543 34443
No 472
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.57 E-value=7.3e-05 Score=52.58 Aligned_cols=34 Identities=12% Similarity=0.275 Sum_probs=29.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEc
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATN 39 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N 39 (123)
.+|+.+... +...+|+|.+++.+|+|.|+|.|.|
T Consensus 196 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 196 KGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 378888643 5567899999999999999999998
No 473
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.57 E-value=0.00031 Score=49.82 Aligned_cols=60 Identities=12% Similarity=0.191 Sum_probs=40.4
Q ss_pred EEEEccc---CCCCCee--EEEEEEcCCceeEEEEEEec--cCCCceeecCCCCCCCCeEEEEEEeC
Q psy17207 19 TLMIRKV---VASDFGN--YSCEATNPMGKHRAYLELSG--KPNPAIFRSHPQGRLPNSYNITWMVS 78 (123)
Q Consensus 19 ~L~I~~v---~~~D~G~--YtC~A~N~~G~~~~~i~l~~--~P~p~~~~~~~~~~~~~~~~L~w~~~ 78 (123)
.|.|..+ +..|.|. |+|.|.|..|.....+.|.. .|.|...........+..+.|.|.+.
T Consensus 57 ~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~ 123 (265)
T 2oz4_A 57 SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH 123 (265)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC
T ss_pred eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc
Confidence 4555555 7788885 99999999999887666554 44433222222222578899999987
No 474
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=97.53 E-value=0.0003 Score=45.37 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=30.3
Q ss_pred cCCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 5 TTERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 5 ~d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
..+|+.+. .......|+|.+++.+|+|.|.|......
T Consensus 69 ~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 69 WTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPS 107 (122)
T ss_dssp CSTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred ecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCC
Confidence 34799884 34567789999999999999999988764
No 475
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.53 E-value=3.7e-05 Score=52.69 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=29.4
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEE
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLEL 50 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l 50 (123)
+.|+|.++..+|.|.|+|+|.|..|....++.+
T Consensus 177 s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 209 (213)
T 3mj8_L 177 SYLTMTADAWKSRNTFICKVTHGGNTVEKSLSP 209 (213)
T ss_dssp EEEEEESHHHHSCSCEEEEEEETTEEEEEEECC
T ss_pred EEEEEeHHHcCCCCEEEEEEEECCccEEeeecc
Confidence 569999999999999999999999888877644
No 476
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=97.53 E-value=9.3e-05 Score=47.43 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=29.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 65 KGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG 101 (123)
T ss_dssp TTTEEEEEETTEEEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 469988743 34568999999999999999999875
No 477
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.52 E-value=0.00028 Score=53.68 Aligned_cols=63 Identities=11% Similarity=0.253 Sum_probs=42.6
Q ss_pred EEEEEcccCCCCCeeEEEEEEcCCceeEEEEEEec-----------cCC-CceeecCCC----CCCCCeEEEEEEeCCCC
Q psy17207 18 HTLMIRKVVASDFGNYSCEATNPMGKHRAYLELSG-----------KPN-PAIFRSHPQ----GRLPNSYNITWMVSSYT 81 (123)
Q Consensus 18 ~~L~I~~v~~~D~G~YtC~A~N~~G~~~~~i~l~~-----------~P~-p~~~~~~~~----~~~~~~~~L~w~~~s~~ 81 (123)
+.|+|.+++..| |.|+|.|.|..|.......+.. .+. |..+...+. ...+..+.|.|.+.+.+
T Consensus 180 s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~ 258 (434)
T 1igy_B 180 SSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDIS 258 (434)
T ss_dssp EEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCC
T ss_pred EEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccc
Confidence 579999999999 9999999999998544333321 111 333222221 23578899999998764
No 478
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=97.51 E-value=9.5e-05 Score=52.91 Aligned_cols=70 Identities=16% Similarity=0.220 Sum_probs=43.7
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC----CceeEEEEEEecc--CC-CceeecCCCCCCCCeEEEEEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP----MGKHRAYLELSGK--PN-PAIFRSHPQGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~----~G~~~~~i~l~~~--P~-p~~~~~~~~~~~~~~~~L~w~ 76 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+.+. +|... .+.|.+. |. |.++...+. ...+.|.|.
T Consensus 59 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~g~gt-~L~V~~~~~~~~P~V~~~~~~---~~~~tL~Cl 134 (229)
T 2q86_A 59 NGRYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRGSALFGSGT-QLIVIPYIQNPEPAVYQLKDP---RSQDSTLCL 134 (229)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGGGCEECCCE-EEEEECCCSSCCCEEEEEECT---TSTTCEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEcccCcccCccEEEEEEecCcccccCCE-EEEEECcCCCCCCEEEEccCC---CCCeEEEEE
Confidence 47888753 345678999999999999999999763 22222 3444432 22 333322111 226778888
Q ss_pred eCC
Q psy17207 77 VSS 79 (123)
Q Consensus 77 ~~s 79 (123)
+.+
T Consensus 135 ~~g 137 (229)
T 2q86_A 135 FTD 137 (229)
T ss_dssp EEE
T ss_pred ECC
Confidence 765
No 479
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=97.51 E-value=0.00012 Score=46.85 Aligned_cols=35 Identities=11% Similarity=0.257 Sum_probs=29.1
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (122)
T 1xiw_D 65 KDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGY 101 (122)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCcEEEEEecCCCEEEEEECCCCHHHCEEEEEEEecc
Confidence 369988643 45678999999999999999999873
No 480
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=97.51 E-value=9.4e-05 Score=52.18 Aligned_cols=74 Identities=18% Similarity=0.308 Sum_probs=46.0
Q ss_pred CCCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcC----CceeEEEEEEec---cCCCceeecCCCCCCCCeEEEEEE
Q psy17207 6 TERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP----MGKHRAYLELSG---KPNPAIFRSHPQGRLPNSYNITWM 76 (123)
Q Consensus 6 d~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~----~G~~~~~i~l~~---~P~p~~~~~~~~~~~~~~~~L~w~ 76 (123)
.+|+++. ..+....|+|++++.+|+|.|.|.+... +|... .+.|.. .|.|.++...+. ..++.|.|.
T Consensus 58 ~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~~~~fG~GT-~L~V~~~~~~~~P~V~~~~~~---~~~~tl~Cl 133 (199)
T 3gsn_A 58 KGRISATLNTKEGYSYLYIKGSQPEDSATYLCARNTGNQFYFGTGT-SLTVIPNIQNPDPAVYQLRDS---KSSDKSVCL 133 (199)
T ss_dssp ETTEECCCBTTTTEEEEEBSSCCGGGCEEEEEEEESSSCEEECSCE-EEEEECCCSSCCCEEEECCCS---SSSSSCCEE
T ss_pred cCceEEEECCCCCEEEEEEccCcccCCccEEEEEcccccccCCCCE-EEEEecccCCCCCEEEEcccC---CCCceEEEE
Confidence 3688775 3455788999999999999999998653 12211 344443 233444332222 234678899
Q ss_pred eCCCCCC
Q psy17207 77 VSSYTPL 83 (123)
Q Consensus 77 ~~s~~pi 83 (123)
+.+..|.
T Consensus 134 ~~gf~P~ 140 (199)
T 3gsn_A 134 FTDFDSQ 140 (199)
T ss_dssp EETCCTT
T ss_pred eecccCC
Confidence 8776663
No 481
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.51 E-value=0.00013 Score=47.35 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=29.8
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 64 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 100 (127)
T 1kxt_B 64 KGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAGPG 100 (127)
T ss_dssp TTTEEEEECSSSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 469988753 45678999999999999999999875
No 482
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=97.51 E-value=2.6e-05 Score=62.72 Aligned_cols=98 Identities=8% Similarity=0.082 Sum_probs=0.0
Q ss_pred ccCCCCCeeEEEEEEcCCceeEE---EEEEeccCCCceeecCCCCCCCCeEEEEEEeC---CCCCCcceEEEeEEcCCCC
Q psy17207 24 KVVASDFGNYSCEATNPMGKHRA---YLELSGKPNPAIFRSHPQGRLPNSYNITWMVS---SYTPLEEFKIKYRKIPGNE 97 (123)
Q Consensus 24 ~v~~~D~G~YtC~A~N~~G~~~~---~i~l~~~P~p~~~~~~~~~~~~~~~~L~w~~~---s~~pi~~y~v~yr~~~~~~ 97 (123)
+....|.|.|.|.+.|.+|.+.. ......+|.+|..... .....++.|+|.++ ++.++..|.|+|+......
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~~--~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTA--VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEEE--ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccceEE--EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Q ss_pred CCc------eeeeeccccccccceeeeeeecC
Q psy17207 98 PSP------MSNQLTGTNQYQNRRLVRKITEN 123 (123)
Q Consensus 98 ~~w------~~~~~~~~~~~~~~~~~~~~~~~ 123 (123)
..| ..+.........+...+.+|.++
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTT
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCC
No 483
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=97.51 E-value=0.00022 Score=51.38 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=44.8
Q ss_pred CCEEEE--EcCCEEEEEEcccCCCCCeeEEEEEEcC-------CceeEEEEEEec---cCCCceeecCCCCCCCCeEEEE
Q psy17207 7 ERRIME--TRGSRHTLMIRKVVASDFGNYSCEATNP-------MGKHRAYLELSG---KPNPAIFRSHPQGRLPNSYNIT 74 (123)
Q Consensus 7 ~R~~i~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~-------~G~~~~~i~l~~---~P~p~~~~~~~~~~~~~~~~L~ 74 (123)
+|+++. ..+....|+|++++.+|+|.|.|.+... +|... .+.|.. .|.|..+...+. ..++.|.
T Consensus 69 ~Rfs~s~~~~~~~~sLtI~~lq~~DSG~YyCa~~~~~~~~~~~fG~GT-~LtV~~~~~~~~P~V~~~~~~---~~~~tl~ 144 (226)
T 3tjh_C 69 NGFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKGTGSKLSFGKGA-KLTVSPNIQNPDPAVYQLRDS---KSSDKSV 144 (226)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEESSCSSSEEECCCE-EEEEECCCSSCCCEEEEEEEC---C---CEE
T ss_pred CcEEEEEcCCCCEEEEEEecCCcccCCCEEEEEEecCCccccccCCCe-EEEEeCCCCCCCCEEEEcccC---CCCeEEE
Confidence 788876 3456788999999999999999998742 22221 233333 233433322111 2346799
Q ss_pred EEeCCCCCCc
Q psy17207 75 WMVSSYTPLE 84 (123)
Q Consensus 75 w~~~s~~pi~ 84 (123)
|.+.+..|..
T Consensus 145 Cl~~~f~P~i 154 (226)
T 3tjh_C 145 CLFTDFDSQT 154 (226)
T ss_dssp EEEESCCTTC
T ss_pred EEcccccCCc
Confidence 9987765533
No 484
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=97.50 E-value=0.0001 Score=47.28 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=28.9
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+.+..+ +....|+|.+++.+|+|.|.|.+.+.
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 103 (123)
T 2p45_B 68 GRMTISRDKGKNTVYLQMDSLKPEDTATYYCAAGGY 103 (123)
T ss_dssp TTEEEECCTTSSEEEEEESSCCGGGCEEEEEEESSC
T ss_pred CeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEec
Confidence 68988743 45678999999999999999999874
No 485
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=97.50 E-value=0.00016 Score=46.77 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=29.3
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ .....|+|.+++.+|+|.|.|.+.+.
T Consensus 64 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (124)
T 1yc7_A 64 KGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCG 100 (124)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 369988753 35678999999999999999999875
No 486
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.49 E-value=0.00015 Score=47.18 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=27.4
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEE
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA 46 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~ 46 (123)
...|.|..|..+|+|.|.|.|.|..|..++
T Consensus 78 ~fiL~f~~V~~sDsG~YrCsAn~~~g~ieS 107 (122)
T 1xau_A 78 VFVLHFKPIHLSDNGSYSCSTNFNSQVINS 107 (122)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEEEC
T ss_pred eEEEEEeeEEEcCCccEEEEeeCCCCceee
Confidence 458999999999999999999999988876
No 487
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=97.49 E-value=0.00015 Score=46.66 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=28.8
Q ss_pred CCCEEEEEc-CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR-GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+++... .....|+|.+++.+|+|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 61 PDGYKASRPSQENFSLTLESATPSQTSVYFCASGGG 96 (121)
T ss_dssp CTTEEEECCSSSEEEEEESSCCGGGCEEEEEEEESS
T ss_pred CCCeEEEcCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 478887642 33678999999999999999999875
No 488
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.49 E-value=9.7e-05 Score=50.14 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=24.1
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
...+.|.|.+++.+|+|.|+|.|.|..
T Consensus 146 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 146 KVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 456799999999999999999999864
No 489
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=97.48 E-value=0.00014 Score=47.00 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=29.5
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 2x1q_A 65 KGRFTFSRDNAKNLLYLEMLSLEPEDTAVYYCAASSR 101 (127)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEEcCCCHHHCEEEEEEEEec
Confidence 369988643 45678999999999999999999875
No 490
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.48 E-value=9.7e-05 Score=52.87 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=29.4
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCC-----ceeEEEEEEeccCCCceee
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPM-----GKHRAYLELSGKPNPAIFR 60 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~-----G~~~~~i~l~~~P~p~~~~ 60 (123)
.....|.|.+++.+|+|.|+|.|.|.. -++...+.|.+.+..|.+.
T Consensus 149 ~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~l~ 199 (242)
T 1p6f_A 149 KVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTSLA 199 (242)
T ss_dssp SSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--------
T ss_pred CceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCccc
Confidence 456789999999999999999999864 1223456666655554443
No 491
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=97.47 E-value=0.00014 Score=46.30 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=26.9
Q ss_pred CCCEEEEE-cCCEEEEEEcccCCCCCeeEEEEEEc
Q psy17207 6 TERRIMET-RGSRHTLMIRKVVASDFGNYSCEATN 39 (123)
Q Consensus 6 d~R~~i~~-~~~~~~L~I~~v~~~D~G~YtC~A~N 39 (123)
.+|+.+.. .....+|+|++++.+|+|.|.|...+
T Consensus 65 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~ 99 (119)
T 2pnd_A 65 RGRLKVSHKVPGDVSLQINTLQMDDRNHYTCEVTW 99 (119)
T ss_dssp TTTEEECCSSTTBCCEEESSCCGGGCEEEEEEEEE
T ss_pred cCcEEEccCCCCCEEEEEccCCcccCEEEEEEEEE
Confidence 36776642 23456799999999999999999887
No 492
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=97.47 E-value=0.00013 Score=51.83 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=45.6
Q ss_pred CCCEEEEE--cCCEEEEEEcccCCCCCeeEEEEEEcC--------CceeEEEEEEec---cCCCceeecCCCCCCCCeEE
Q psy17207 6 TERRIMET--RGSRHTLMIRKVVASDFGNYSCEATNP--------MGKHRAYLELSG---KPNPAIFRSHPQGRLPNSYN 72 (123)
Q Consensus 6 d~R~~i~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~--------~G~~~~~i~l~~---~P~p~~~~~~~~~~~~~~~~ 72 (123)
.+|+++.. .+....|+|++++.+|+|.|.|.+... +|... .+.|.. .|.|..+...+. ..++.
T Consensus 59 ~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~~~~~~~~~fG~GT-~L~V~~~~~~~~PsVf~l~~~---~~~~t 134 (208)
T 4ei6_A 59 EGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQGLTFGLGT-RVSVFPYIQNPDPAVYQLRDS---KSSDK 134 (208)
T ss_dssp ETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEECCSSCCCCEECCCE-EEEEECCCSSCCCEEEEEEBS---SCTTC
T ss_pred CCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecCCCccccccCCCCE-EEEEeCcccCCCCEEEEcccC---CCCce
Confidence 47888763 345678999999999999999998742 12221 334443 233444332121 12357
Q ss_pred EEEEeCCCCCCc
Q psy17207 73 ITWMVSSYTPLE 84 (123)
Q Consensus 73 L~w~~~s~~pi~ 84 (123)
|.|.+.+..|..
T Consensus 135 l~Cl~~~f~P~i 146 (208)
T 4ei6_A 135 SVCLFTDFDSQT 146 (208)
T ss_dssp EEEEEESCCTTC
T ss_pred EEEEeeccCCce
Confidence 889987766633
No 493
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=97.46 E-value=0.00015 Score=46.84 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=29.2
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+.+..+ +....|+|.+++.+|+|.|.|.+.+.
T Consensus 71 ~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 106 (127)
T 1i3u_A 71 GRFAVSRDNAKNTVNLQMNSLKPEDTAVYYCAAKTT 106 (127)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred CeEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 69988743 45778999999999999999999875
No 494
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.46 E-value=9.1e-05 Score=46.41 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=23.8
Q ss_pred CCEEEEEEcccCCCCCeeEEEEEEcCC
Q psy17207 15 GSRHTLMIRKVVASDFGNYSCEATNPM 41 (123)
Q Consensus 15 ~~~~~L~I~~v~~~D~G~YtC~A~N~~ 41 (123)
+....|.|.+++.+|+|.|.|.+.|..
T Consensus 53 ~~~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 53 QDAAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp CSEEEEEEECCSGGGCEEEEEEEEEET
T ss_pred CCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 456789999999999999999999853
No 495
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=97.45 E-value=0.0033 Score=44.14 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=52.3
Q ss_pred EEEEEEcccCCCCCeeEEEEEEcCCceeEE--EEEEeccCCCceeec-CCCCCCCCeEEEEEEeCCCCCCcceEEEe
Q psy17207 17 RHTLMIRKVVASDFGNYSCEATNPMGKHRA--YLELSGKPNPAIFRS-HPQGRLPNSYNITWMVSSYTPLEEFKIKY 90 (123)
Q Consensus 17 ~~~L~I~~v~~~D~G~YtC~A~N~~G~~~~--~i~l~~~P~p~~~~~-~~~~~~~~~~~L~w~~~s~~pi~~y~v~y 90 (123)
-..|.|++++ |.|.|.|.+.-.-...++ .|.|+..|.-+.+.. +.....+..++|.|.+.+..|.....|.+
T Consensus 51 w~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~l 125 (192)
T 1zxq_A 51 WKHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFL 125 (192)
T ss_dssp EEEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEE
T ss_pred eEEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEE
Confidence 3579999998 789999999976555444 566667777665552 22334688999999999988887764443
No 496
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=97.44 E-value=9.6e-05 Score=47.81 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=29.0
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 3cx5_J 65 KDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEY 101 (127)
T ss_dssp TTTBCCEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 368877643 56778999999999999999999874
No 497
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=97.44 E-value=9e-05 Score=49.04 Aligned_cols=36 Identities=33% Similarity=0.476 Sum_probs=31.8
Q ss_pred EEEEEcccCC-CCCeeEEEEEEcCCceeEEEEEEecc
Q psy17207 18 HTLMIRKVVA-SDFGNYSCEATNPMGKHRAYLELSGK 53 (123)
Q Consensus 18 ~~L~I~~v~~-~D~G~YtC~A~N~~G~~~~~i~l~~~ 53 (123)
.+|+|.+++. +|+|+|+|.+.+.....+..++|...
T Consensus 78 aSL~i~~v~~~sD~G~YtC~v~~~~~~~~~~i~Lkv~ 114 (127)
T 2jjs_C 78 ASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYR 114 (127)
T ss_dssp CCEEEEHHHHHTSCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEcccccccCCcEEEEEEEeCCceEEEEEEEEEE
Confidence 6899999998 79999999999998888888887753
No 498
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.43 E-value=0.0005 Score=43.97 Aligned_cols=70 Identities=10% Similarity=0.056 Sum_probs=44.2
Q ss_pred ccCCCceeecCCCCCCCCeEEEEEEeC--CCCCCcceEEEeEEcC-CCCCCceeeeeccccccccceeeeeeec
Q psy17207 52 GKPNPAIFRSHPQGRLPNSYNITWMVS--SYTPLEEFKIKYRKIP-GNEPSPMSNQLTGTNQYQNRRLVRKITE 122 (123)
Q Consensus 52 ~~P~p~~~~~~~~~~~~~~~~L~w~~~--s~~pi~~y~v~yr~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (123)
+.|.+|..... .....+++.|.|.+. ++.+|..|.|+|+... .....|..+...........+.|.+|.+
T Consensus 16 ~~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p 88 (124)
T 1wis_A 16 ELPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 88 (124)
T ss_dssp CCCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCT
T ss_pred CCCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCC
Confidence 35666654422 223578999999863 5689999999999742 2346797765432233445566666544
No 499
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=97.43 E-value=0.00017 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=29.2
Q ss_pred CCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 7 ERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 7 ~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
+|+++..+ +....|+|.+++.+|+|.|.|.+.+.
T Consensus 66 ~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 101 (134)
T 1zvh_A 66 GRFTVSLDNAENTVYLQMNSLKPEDTALYYCAAARQ 101 (134)
T ss_dssp TTBEEEEETTTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 68988743 55778999999999999999999875
No 500
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=97.42 E-value=0.00017 Score=46.58 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=29.4
Q ss_pred CCCEEEEEc--CCEEEEEEcccCCCCCeeEEEEEEcC
Q psy17207 6 TERRIMETR--GSRHTLMIRKVVASDFGNYSCEATNP 40 (123)
Q Consensus 6 d~R~~i~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~ 40 (123)
.+|+.+..+ +....|+|++++.+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 1mqk_H 65 KGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHEY 101 (127)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 368988643 45678999999999999999999875
Done!