BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1721
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88940|MUSC_MOUSE Musculin OS=Mus musculus GN=Msc PE=1 SV=1
Length = 201
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHKEQ-- 58
MR+LSKAF RLKT+LPWVP DTKLSKLDTLRLA+SYI HL+ LL + + + S+ H
Sbjct: 115 MRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVNLT 174
Query: 59 WTQVLNVRFD 68
W V++ R D
Sbjct: 175 WPFVVSGRPD 184
>sp|O60682|MUSC_HUMAN Musculin OS=Homo sapiens GN=MSC PE=1 SV=2
Length = 206
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHKEQ-- 58
MR+LSKAF RLKT+LPWVP DTKLSKLDTLRLA+SYI HL+ LL + + + + H
Sbjct: 120 MRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVNLT 179
Query: 59 WTQVLNVRFD 68
W V++ R D
Sbjct: 180 WPFVVSGRPD 189
>sp|O35437|TCF21_MOUSE Transcription factor 21 OS=Mus musculus GN=Tcf21 PE=2 SV=1
Length = 179
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 92 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 146
>sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio GN=tcf21 PE=2 SV=1
Length = 176
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 89 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 143
>sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens GN=TCF21 PE=2 SV=2
Length = 179
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 92 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 146
>sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus GN=TCF21 PE=2 SV=1
Length = 179
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 92 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 146
>sp|A8E5T6|TCF21_XENTR Transcription factor 21 OS=Xenopus tropicalis GN=tcf21 PE=2 SV=1
Length = 179
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 92 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 146
>sp|Q6GNB7|TCF21_XENLA Transcription factor 21 OS=Xenopus laevis GN=tcf21 PE=2 SV=1
Length = 179
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
MR+LSKAF RLKTTLPWVP DTKLSKLDTLRLA+SYI HL+ +L+ + + + H
Sbjct: 92 MRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYENGYIH 146
>sp|Q2T9Q7|TCF23_BOVIN Transcription factor 23 OS=Bos taurus GN=TCF23 PE=2 SV=1
Length = 214
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 35/52 (67%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPS 52
+R L +AF L+ TLP VP DTKLSKLD L LATSYI HL L Q+ PS
Sbjct: 89 VRTLRQAFLALQATLPAVPPDTKLSKLDVLVLATSYIAHLTRTLGQEMPGPS 140
>sp|Q9JLR5|TCF23_MOUSE Transcription factor 23 OS=Mus musculus GN=Tcf23 PE=1 SV=1
Length = 209
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPS 52
++ L +AF L+ LP VP DTKLSKLD L LATSYI HL L + P+
Sbjct: 88 VKTLRQAFLALQAALPAVPPDTKLSKLDVLVLATSYIAHLTRTLGHELPGPA 139
>sp|Q7RTU1|TCF23_HUMAN Transcription factor 23 OS=Homo sapiens GN=TCF23 PE=2 SV=1
Length = 214
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPS 52
+R L +AF L+ LP VP DTKLSKLD L LA SYI HL L + P+
Sbjct: 89 VRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHELPGPA 140
>sp|Q7RTU0|TCF24_HUMAN Transcription factor 24 OS=Homo sapiens GN=TCF24 PE=3 SV=3
Length = 167
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPS 52
++ L AF L+ TLP VP DTKLSKLD L LAT+YI HL L + P+
Sbjct: 62 VQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPA 113
>sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-expressed protein 1 OS=Ovis
aries GN=HAND1 PE=2 SV=1
Length = 204
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDP 51
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP
Sbjct: 116 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDP 165
>sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-expressed protein 1 OS=Homo
sapiens GN=HAND1 PE=2 SV=1
Length = 215
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP E
Sbjct: 110 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQSGDPEAFKAE 165
>sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-expressed protein 1
OS=Oryctolagus cuniculus GN=HAND1 PE=2 SV=1
Length = 215
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP E
Sbjct: 110 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE 165
>sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-expressed protein 1 OS=Bos
taurus GN=HAND1 PE=2 SV=1
Length = 218
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP E
Sbjct: 113 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE 168
>sp|Q64279|HAND1_MOUSE Heart- and neural crest derivatives-expressed protein 1 OS=Mus
musculus GN=Hand1 PE=1 SV=1
Length = 216
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP E
Sbjct: 110 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE 165
>sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed protein 1 OS=Rattus
norvegicus GN=Hand1 PE=2 SV=2
Length = 216
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q DP E
Sbjct: 110 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE 165
>sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus GN=Tcf15 PE=1 SV=2
Length = 195
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLK--MLLSQQQDD 50
++ AF L+T +P P D KLSK++TLRLA+SYI HL +LL DD
Sbjct: 86 VNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDAADD 134
>sp|Q90691|HAND1_CHICK Heart- and neural crest derivatives-expressed protein 1 OS=Gallus
gallus GN=HAND1 PE=2 SV=1
Length = 202
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ--QQDDPSHTHKE 57
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L++ Q +P E
Sbjct: 99 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMEVLARDSQPGEPEGFKAE 154
>sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed protein 2 OS=Rattus
norvegicus GN=Hand2 PE=2 SV=1
Length = 217
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ 46
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L LL++
Sbjct: 115 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
>sp|Q61039|HAND2_MOUSE Heart- and neural crest derivatives-expressed protein 2 OS=Mus
musculus GN=Hand2 PE=1 SV=3
Length = 217
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ 46
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L LL++
Sbjct: 115 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
>sp|P61296|HAND2_HUMAN Heart- and neural crest derivatives-expressed protein 2 OS=Homo
sapiens GN=HAND2 PE=1 SV=1
Length = 217
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ 46
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L LL++
Sbjct: 115 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
>sp|P57101|HAND2_XENLA Heart- and neural crest derivatives-expressed protein 2 OS=Xenopus
laevis GN=hand2 PE=2 SV=1
Length = 210
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ 46
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L LL++
Sbjct: 108 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 150
>sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus auratus GN=TCF15 PE=2 SV=1
Length = 195
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLK--MLLSQQQDD 50
++ AF L+T +P P D KLSK++TLRLA+SYI HL ++L DD
Sbjct: 86 VNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLMLGDAADD 134
>sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-expressed protein 1 OS=Xenopus
laevis GN=hand1 PE=2 SV=1
Length = 197
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTH 55
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L+ + +P T
Sbjct: 96 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIGYLMDVLA-KDSEPGGTE 146
>sp|Q12870|TCF15_HUMAN Transcription factor 15 OS=Homo sapiens GN=TCF15 PE=2 SV=3
Length = 199
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLK--MLLSQQQDD 50
++ AF L+T +P P D KLSK++T+RLA+SYI HL +LL DD
Sbjct: 88 VNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGDSADD 136
>sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-expressed protein 2 OS=Danio
rerio GN=hand2 PE=2 SV=1
Length = 208
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDD 50
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L +L + + +
Sbjct: 106 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDILDKDEQN 152
>sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-expressed protein 2 OS=Gallus
gallus GN=HAND2 PE=2 SV=1
Length = 216
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQ 46
++ AF L+ +P VP DTKLSK+ TLRLATSYI +L LL +
Sbjct: 114 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLPK 156
>sp|Q64124|SCX_MOUSE Basic helix-loop-helix transcription factor scleraxis OS=Mus
musculus GN=Scx PE=1 SV=1
Length = 207
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
++ AF L+T +P P D KLSK++TLRLA+SYI HL +L
Sbjct: 94 VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 134
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus GN=TCF15 PE=2 SV=2
Length = 183
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLK--MLLSQQQDD 50
++ AF L+T +P P D KLSK++TLRLA+SYI HL +LL + +D
Sbjct: 77 VNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGEGCED 125
>sp|Q7RTU7|SCX_HUMAN Basic helix-loop-helix transcription factor scleraxis OS=Homo
sapiens GN=SCXA PE=2 SV=1
Length = 201
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
++ AF L+T +P P D KLSK++TLRLA+SYI HL +L
Sbjct: 91 VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 131
>sp|P59101|SCX_CHICK Basic helix-loop-helix transcription factor scleraxis OS=Gallus
gallus GN=SCX PE=2 SV=1
Length = 187
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 4 LSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
++ AF L+T +P P D KLSK++TLRLA+SYI HL +L
Sbjct: 83 VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 123
>sp|O13125|ATO7A_XENLA Protein atonal homolog 7-A OS=Xenopus laevis GN=atoh7-a PE=1 SV=1
Length = 138
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHKEQWT 60
M+ L+ AF L+ +P +D +LSK +TL++A SYI+ L +LS+ + S T E+WT
Sbjct: 46 MQGLNTAFDSLRKVVPQWGEDKQLSKYETLQMALSYIMALSRILSEAERY-SRTDPEEWT 104
Query: 61 QVLNVRFD 68
N+++D
Sbjct: 105 ---NIQYD 109
>sp|Q8AW52|ATOH7_DANRE Protein atonal homolog 7 OS=Danio rerio GN=atoh7 PE=1 SV=1
Length = 134
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHKEQWT 60
M+ L+ AF RL+ +P +D KLSK +TL++A SYI+ L +LS + H +
Sbjct: 41 MQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALNRILSD-----AGRHVDPQK 95
Query: 61 QVLNVRFD 68
LN++FD
Sbjct: 96 DWLNLQFD 103
>sp|Q9Z2E5|ATOH7_MOUSE Protein atonal homolog 7 OS=Mus musculus GN=Atoh7 PE=2 SV=1
Length = 149
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDD 50
M+ L+ AF RL+ +P +D KLSK +TL++A SYI+ L +L++ + D
Sbjct: 54 MQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIIALTRILAEAERD 103
>sp|Q6QHK4|FIGLA_HUMAN Factor in the germline alpha OS=Homo sapiens GN=FIGLA PE=1 SV=2
Length = 219
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHKEQ 58
++ L++ F RLK +P++P+ K SK+D L+ AT YI L LL +D EQ
Sbjct: 78 IKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEGAKDSKKQDPDEQ 135
>sp|O16867|TAP_DROME Basic helix-loop-helix neural transcription factor TAP
OS=Drosophila melanogaster GN=tap PE=2 SV=2
Length = 398
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
M L+ A +L+ TLP +P++TKL+K++ LR A +YI L+ +L
Sbjct: 167 MHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVL 210
>sp|O57598|ATOH7_CHICK Protein atonal homolog 7 OS=Gallus gallus GN=ATOH7 PE=1 SV=2
Length = 151
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQ 48
M+ L+ AF RL+ +P +D KLSK +TL++A SYI+ L +L++ +
Sbjct: 52 MQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 99
>sp|O13126|ATO7B_XENLA Protein atonal homolog 7-B OS=Xenopus laevis GN=atoh7-b PE=1 SV=1
Length = 138
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQ----DDPS---- 52
M+ L+ AF L+ +P +D KLSK +TL++A SYI+ L +L++ + DP
Sbjct: 46 MQGLNTAFDSLRKVVPQWGEDKKLSKYETLQMALSYIMALSRILTEAERYSRTDPGEWTK 105
Query: 53 ----HTHKEQWTQVLNVRFDR 69
H +EQ + VR R
Sbjct: 106 MHFDHIQEEQCLSYMGVRCPR 126
>sp|Q6XD76|ASCL4_HUMAN Achaete-scute homolog 4 OS=Homo sapiens GN=ASCL4 PE=2 SV=1
Length = 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQ 47
+R +++ + RL+ LP D +LSK++TLR A YI HL+ LL +Q
Sbjct: 85 VRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLERQ 131
>sp|Q8N100|ATOH7_HUMAN Protein atonal homolog 7 OS=Homo sapiens GN=ATOH7 PE=2 SV=1
Length = 152
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQ 48
M+ L+ AF RL+ +P +D KLSK +TL++A SYI+ L +L++ +
Sbjct: 53 MQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alpha OS=Danio rerio
GN=ptf1a PE=2 SV=1
Length = 265
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
M+ ++ AF L++ +P +P + +LSK+DTLRLA YI L L+
Sbjct: 128 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELV 171
>sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha OS=Rattus norvegicus
GN=Ptf1a PE=1 SV=1
Length = 326
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDP 51
M+ ++ AF L++ +P +P + +LSK+DTLRLA YI L L+ Q D P
Sbjct: 175 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV--QADLP 223
>sp|Q7RTS3|PTF1A_HUMAN Pancreas transcription factor 1 subunit alpha OS=Homo sapiens
GN=PTF1A PE=1 SV=1
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDP 51
M+ ++ AF L++ +P +P + +LSK+DTLRLA YI L L+ Q D P
Sbjct: 176 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV--QADLP 224
>sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit alpha OS=Mus musculus
GN=Ptf1a PE=1 SV=1
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDP 51
M+ ++ AF L++ +P +P + +LSK+DTLRLA YI L L+ Q D P
Sbjct: 173 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV--QADLP 221
>sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis
GN=ptf1a PE=2 SV=1
Length = 270
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 1 MRILSKAFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLL 44
M+ ++ AF L++ +P +P + +LSK+DTLRLA YI L ++
Sbjct: 132 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSEMV 175
>sp|P24899|TAL1_CHICK T-cell acute lymphocytic leukemia protein 1 homolog OS=Gallus
gallus GN=TAL1 PE=2 SV=1
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 AFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHK 56
AF L+ +P P D KLSK + LRLA YI L LL+ Q+++ + K
Sbjct: 198 AFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGNQRGK 247
>sp|P22091|TAL1_MOUSE T-cell acute lymphocytic leukemia protein 1 homolog OS=Mus musculus
GN=Tal1 PE=1 SV=1
Length = 329
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 AFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHK 56
AF L+ +P P D KLSK + LRLA YI L LL+ Q+++ + K
Sbjct: 206 AFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAK 255
>sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 OS=Homo sapiens GN=TAL1
PE=1 SV=2
Length = 331
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 AFFRLKTTLPWVPKDTKLSKLDTLRLATSYILHLKMLLSQQQDDPSHTHK 56
AF L+ +P P D KLSK + LRLA YI L LL+ Q+++ + K
Sbjct: 206 AFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAK 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,290,851
Number of Sequences: 539616
Number of extensions: 660084
Number of successful extensions: 2400
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2224
Number of HSP's gapped (non-prelim): 207
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)