Query psy17211
Match_columns 72
No_of_seqs 108 out of 1255
Neff 10.3
Searched_HMMs 29240
Date Sat Aug 17 00:43:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.7 3.3E-17 1.1E-21 98.9 6.4 71 2-72 67-139 (510)
2 2rh1_A Beta-2-adrenergic recep 99.7 8.1E-17 2.8E-21 96.8 7.3 72 1-72 71-142 (500)
3 3rze_A Histamine H1 receptor, 99.7 1.3E-16 4.3E-21 94.1 7.4 72 1-72 39-110 (452)
4 2lnl_A C-X-C chemokine recepto 99.7 3.3E-16 1.1E-20 88.7 8.8 70 1-72 42-111 (296)
5 3uon_A Human M2 muscarinic ace 99.7 1.6E-16 5.4E-21 94.0 7.5 72 1-72 54-125 (467)
6 4dkl_A MU-type opioid receptor 99.7 3.4E-16 1.2E-20 92.4 8.3 71 1-72 48-118 (464)
7 2ks9_A Substance-P receptor; w 99.7 3.2E-16 1.1E-20 90.5 7.9 72 1-72 63-134 (364)
8 3vw7_A Proteinase-activated re 99.7 1.9E-16 6.6E-21 94.0 6.7 72 1-72 51-122 (484)
9 3v2y_A Sphingosine 1-phosphate 99.7 4E-16 1.4E-20 94.3 7.5 71 1-72 94-164 (520)
10 1u19_A Rhodopsin; G protein-co 99.7 5.2E-16 1.8E-20 88.9 7.6 72 1-72 69-140 (349)
11 3pbl_A D(3) dopamine receptor, 99.6 6.5E-16 2.2E-20 91.7 7.9 72 1-72 69-141 (481)
12 4amj_A Beta-1 adrenergic recep 99.6 1.2E-16 4.2E-21 90.3 4.2 72 1-72 42-113 (315)
13 3sn6_R Lysozyme, beta-2 adrene 99.6 8.8E-16 3E-20 92.5 5.5 72 1-72 213-284 (514)
14 3odu_A C-X-C chemokine recepto 99.6 2.6E-15 9E-20 89.5 6.8 70 1-72 79-148 (502)
15 4ea3_A Fusion protein of nocic 99.6 3E-15 1E-19 88.6 6.9 71 1-72 156-226 (434)
16 2z73_A Rhodopsin; visual pigme 99.6 7.1E-15 2.4E-19 87.1 7.8 72 1-72 65-137 (448)
17 3eml_A Human adenosine A2A rec 99.6 3.7E-15 1.3E-19 88.4 6.4 70 1-72 52-121 (488)
18 4eiy_A Adenosine receptor A2A/ 99.6 5.3E-15 1.8E-19 87.1 6.9 70 1-72 62-131 (447)
19 1hll_A Alpha-2A adrenergic rec 98.1 8.5E-07 2.9E-11 34.9 1.1 17 56-72 2-18 (32)
20 2ljb_A M2 protein, BM2 protein 36.9 23 0.00078 13.7 3.1 18 53-70 13-30 (35)
21 3lbw_A M2 protein; proton chan 33.1 22 0.00075 12.4 3.3 16 54-69 7-22 (23)
22 3bkd_A Transmembrane domain of 27.7 30 0.001 12.3 3.3 17 53-69 9-25 (26)
23 2kih_A Matrix protein 2; S31N, 24.0 47 0.0016 13.3 3.3 19 52-70 12-30 (43)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.70 E-value=3.3e-17 Score=98.88 Aligned_cols=71 Identities=21% Similarity=0.569 Sum_probs=64.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 2 RTVTNYYLVNLSLADLFMAVFNCVFNFIYMLY--SHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 2 ~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
|+++|+|+.|||++|++.++...|..+..... +.|.+++..|++..++...+..+|++++++|++|||+||
T Consensus 67 ~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai 139 (510)
T 4grv_A 67 QSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAI 139 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEE
Confidence 47899999999999999999999988876653 568999999999999999999999999999999999875
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.69 E-value=8.1e-17 Score=96.82 Aligned_cols=72 Identities=35% Similarity=0.619 Sum_probs=67.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+.....+.|..+...|++..++..+...+|++++++|++|||+||
T Consensus 71 l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI 142 (500)
T 2rh1_A 71 LQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 142 (500)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 478999999999999999999889988888888899999999999999999999999999999999999875
No 3
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=94.08 Aligned_cols=72 Identities=31% Similarity=0.627 Sum_probs=68.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+.....+.|..+...|++..++..++...|.+++++|++|||++|
T Consensus 39 ~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 110 (452)
T 3rze_A 39 LHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSV 110 (452)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 578999999999999999999899999988888899999999999999999999999999999999999875
No 4
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.68 E-value=3.3e-16 Score=88.66 Aligned_cols=70 Identities=33% Similarity=0.588 Sum_probs=61.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+|+|+++.|||++|++.++. .|....... ++|..++..|+...+....+..+|.+++++|++|||.+|
T Consensus 42 lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI 111 (296)
T 2lnl_A 42 GRSVTDVYLLNLALADLLFALT-LPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAI 111 (296)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH-SSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc-CCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence 6899999999999999998764 555554443 569999999999999999999999999999999999886
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.68 E-value=1.6e-16 Score=93.98 Aligned_cols=72 Identities=33% Similarity=0.664 Sum_probs=67.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+.....+.|..+...|++..++..+...+|.+++++|++|||++|
T Consensus 54 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai 125 (467)
T 3uon_A 54 LQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCV 125 (467)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999899998888888899999999999999999999999999999999999875
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.67 E-value=3.4e-16 Score=92.41 Aligned_cols=71 Identities=37% Similarity=0.691 Sum_probs=65.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.++. .|..+.....+.|..+...|++..++..++..+|.+++++|++|||++|
T Consensus 48 ~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 118 (464)
T 4dkl_A 48 MKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAV 118 (464)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999998876 8888888888899999999999999999999999999999999999875
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.67 E-value=3.2e-16 Score=90.49 Aligned_cols=72 Identities=44% Similarity=0.849 Sum_probs=66.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|........++|..++..|+...++......+|.+++++|++|||.+|
T Consensus 63 l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI 134 (364)
T 2ks9_A 63 MRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAI 134 (364)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999988888888877777889999999999999999999999999999999999875
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=94.04 Aligned_cols=72 Identities=24% Similarity=0.399 Sum_probs=61.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.++...+........+.|..+...|++..++..++..+|++++++|++|||+||
T Consensus 51 l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI 122 (484)
T 3vw7_A 51 VKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAV 122 (484)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEE
Confidence 478999999999999999976544444444444589999999999999999999999999999999999875
No 9
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.66 E-value=4e-16 Score=94.33 Aligned_cols=71 Identities=21% Similarity=0.310 Sum_probs=63.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.++...|..+.. ....|..+...|.+..++..+...+|++++++|++|||+||
T Consensus 94 lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI 164 (520)
T 3v2y_A 94 FHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITM 164 (520)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEE
Confidence 589999999999999999999887776655 55678888999999999999999999999999999999875
No 10
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.65 E-value=5.2e-16 Score=88.93 Aligned_cols=72 Identities=29% Similarity=0.519 Sum_probs=66.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|........+.|..++..|+...+....+..+|.+++++|++|||.+|
T Consensus 69 ~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI 140 (349)
T 1u19_A 69 LRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVV 140 (349)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 578999999999999999999888888877777889999999999999999999999999999999999875
No 11
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.65 E-value=6.5e-16 Score=91.72 Aligned_cols=72 Identities=31% Similarity=0.566 Sum_probs=65.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLY-SHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+..... +.|..+...|++..++..++..++.+++++|++|||++|
T Consensus 69 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 141 (481)
T 3pbl_A 69 LQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAV 141 (481)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999998888888776665 678999999999999999999999999999999999875
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.64 E-value=1.2e-16 Score=90.29 Aligned_cols=72 Identities=26% Similarity=0.544 Sum_probs=66.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+.....++|..++..|+...+....+..+|.++++++++|||.+|
T Consensus 42 ~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 113 (315)
T 4amj_A 42 LQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAI 113 (315)
T ss_dssp GCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 478999999999999999988788888888888899999999999999999999999999999999999875
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.61 E-value=8.8e-16 Score=92.52 Aligned_cols=72 Identities=35% Similarity=0.616 Sum_probs=67.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++...|..+.....+.|..+...|++..++..++..+|.+++++|++|||++|
T Consensus 213 lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI 284 (514)
T 3sn6_R 213 LQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 284 (514)
T ss_dssp GCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 478999999999999999998889988888888899999999999999999999999999999999999875
No 14
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.60 E-value=2.6e-15 Score=89.51 Aligned_cols=70 Identities=33% Similarity=0.611 Sum_probs=62.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.+ +..|..+.... .+|..+...|++..++..+...+|++++++|++|||++|
T Consensus 79 l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 148 (502)
T 3odu_A 79 LRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAI 148 (502)
T ss_dssp SCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 57899999999999999995 56777666554 479999999999999999999999999999999999875
No 15
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.60 E-value=3e-15 Score=88.62 Aligned_cols=71 Identities=39% Similarity=0.677 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++. ....|........+.|..+...|+...++..++..+|.+++++|++|||++|
T Consensus 156 l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 226 (434)
T 4ea3_A 156 MKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAI 226 (434)
T ss_dssp CCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEE
Confidence 5899999999999999988 5567888888888889999999999999999999999999999999999875
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.59 E-value=7.1e-15 Score=87.10 Aligned_cols=72 Identities=31% Similarity=0.515 Sum_probs=65.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFN-CVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|++.|+++.|||++|++.++.. .|..+.....++|..+...|++..++..++..+|++++++|++|||++|
T Consensus 65 ~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI 137 (448)
T 2z73_A 65 LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVI 137 (448)
T ss_dssp TCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999998864 7777777777889899999999999999999999999999999999886
No 17
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.58 E-value=3.7e-15 Score=88.43 Aligned_cols=70 Identities=26% Similarity=0.458 Sum_probs=62.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.++...|..+... ..|..+...|++..++..++..+|.+++++|++|||++|
T Consensus 52 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI 121 (488)
T 3eml_A 52 LQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 121 (488)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeE
Confidence 4789999999999999999988888766533 367788899999999999999999999999999999875
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.58 E-value=5.3e-15 Score=87.08 Aligned_cols=70 Identities=26% Similarity=0.458 Sum_probs=62.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhHHHhHHHHHHHHHHHHHHHHHHhhcC
Q psy17211 1 MRTVTNYYLVNLSLADLFMAVFNCVFNFIYMLYSHWPFGEMYCKVNYFITNITVAASVFTLVAISLDRFVEA 72 (72)
Q Consensus 1 l~~~~~~~~~~la~~dl~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai 72 (72)
+|+++|+++.|||++|++.++...|..+... ..|..+...|++..++..++..+|.+++++|++|||++|
T Consensus 62 l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI 131 (447)
T 4eiy_A 62 LQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 131 (447)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEE
Confidence 4789999999999999999988888766533 467778899999999999999999999999999999875
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.11 E-value=8.5e-07 Score=34.89 Aligned_cols=17 Identities=47% Similarity=0.669 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhhcC
Q psy17211 56 ASVFTLVAISLDRFVEA 72 (72)
Q Consensus 56 ~s~~~l~~is~dRy~ai 72 (72)
+|++++++|++|||.+|
T Consensus 2 ~Si~~L~~is~dRy~aI 18 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSI 18 (32)
T ss_dssp HHHHHHHHHHTHHHHHH
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 68899999999999875
No 20
>2ljb_A M2 protein, BM2 protein chimera; M2 channel, transport protein; NMR {Influenza a virus} PDB: 2ljc_A*
Probab=36.86 E-value=23 Score=13.71 Aligned_cols=18 Identities=6% Similarity=0.255 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy17211 53 TVAASVFTLVAISLDRFV 70 (72)
Q Consensus 53 ~~~~s~~~l~~is~dRy~ 70 (72)
....+++++.+..+||..
T Consensus 13 A~IigiLHlilWildrLf 30 (35)
T 2ljb_A 13 ASIIGILHFIAWTIGHLN 30 (35)
T ss_dssp HHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHhhhhH
Confidence 456788899999999864
No 21
>3lbw_A M2 protein; proton channel, M2TM, HOST CEL membrane, hydrogen ION transport, ionic channel, transmembr virion, transport protein; HET: XYL; 1.65A {Influenza a virus}
Probab=33.07 E-value=22 Score=12.38 Aligned_cols=16 Identities=25% Similarity=0.438 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHh
Q psy17211 54 VAASVFTLVAISLDRF 69 (72)
Q Consensus 54 ~~~s~~~l~~is~dRy 69 (72)
...+++++...-+||.
T Consensus 7 ~iigIlHLiLwIlDrL 22 (23)
T 3lbw_A 7 SIIAILHLILWILDRL 22 (26)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhc
Confidence 4567788888888884
No 22
>3bkd_A Transmembrane domain of matrix protein M2; proton channel, M2TM, influenza A virus M2 protein, viral PR membrane protein; HET: MSE BOG; 2.05A {Synthetic} SCOP: j.35.1.1 PDB: 1mp6_A 1nyj_A 2kqt_A* 2kad_A* 3c9j_A*
Probab=27.71 E-value=30 Score=12.35 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy17211 53 TVAASVFTLVAISLDRF 69 (72)
Q Consensus 53 ~~~~s~~~l~~is~dRy 69 (72)
....+++++....+||.
T Consensus 9 a~iiGilHLiLwIldrl 25 (26)
T 3bkd_A 9 ASIMGILHLILWILDRL 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 34567788888888884
No 23
>2kih_A Matrix protein 2; S31N, proton channel, cell membrane, disulfide bond, hydrogen ION transport, ION transport, ionic channel, membrane; NMR {Influenza a virus} PDB: 2rlf_A* 2l0j_A 2kwx_A
Probab=23.96 E-value=47 Score=13.29 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy17211 52 ITVAASVFTLVAISLDRFV 70 (72)
Q Consensus 52 ~~~~~s~~~l~~is~dRy~ 70 (72)
.....+++++....+||..
T Consensus 12 aa~iiGIlHLiLwildRlf 30 (43)
T 2kih_A 12 AANIIGILHLILWILDRLF 30 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999863
Done!