BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17212
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1
Length = 604
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 67 GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 122
>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1
Length = 620
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79 GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134
>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2
Length = 620
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79 GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134
>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1
Length = 620
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79 GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134
>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1
Length = 729
Score = 112 bits (281), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 191 GHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 246
>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1
Length = 653
Score = 112 bits (280), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 116 GHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 171
>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1
Length = 597
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Query: 9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
LSQ ++ + GHGKT KDAASVRATHPIP +CG+YYFEVKI+SKGRDGYMGIGLSAQ V
Sbjct: 62 LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGV 121
Query: 68 NMNRLPG 74
NMNRLPG
Sbjct: 122 NMNRLPG 128
>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/56 (82%), Positives = 52/56 (92%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGKT KDAASVR+THPIP +CG++YFEVKI+SKGRDGYMGIGLS Q VN+NRLPG
Sbjct: 46 GHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPG 101
>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 52/56 (92%)
Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
GHGKT KDAASVR+THPIP +CG++YFEVKI+SKGRDGYMGIGLS Q VN++RLPG
Sbjct: 46 GHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPG 101
>sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster
GN=RanBPM PE=1 SV=1
Length = 962
Score = 99.4 bits (246), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 4 CYKRELSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGL 62
C LSQ ++ + G GK H DAASVR +PIP SCGLYYFEV+I+SKGR+GYMGIGL
Sbjct: 428 CLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGL 487
Query: 63 SAQDVNMNRLPG 74
+AQ MNRLPG
Sbjct: 488 TAQQFRMNRLPG 499
>sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1259.12c PE=4 SV=2
Length = 491
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 23 THKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
T DAASV+A H IP + +YY+E++I+S+G++G MG+G + + NRLPG
Sbjct: 102 TEHDAASVKADHAIPSNTSIYYYEIQILSRGKEGKMGVGFCRKSMQTNRLPG 153
>sp|Q5RBR6|SPRY3_PONAB SPRY domain-containing protein 3 OS=Pongo abelii GN=SPRYD3 PE=2
SV=1
Length = 442
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 18 LGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
LG GK+ D +A HP+ S +YFEV+IV G Y+ +GL+ +D NR PG
Sbjct: 236 LGKGKSIVDVGLAQARHPL--STRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPG 290
>sp|Q8NCJ5|SPRY3_HUMAN SPRY domain-containing protein 3 OS=Homo sapiens GN=SPRYD3 PE=1
SV=2
Length = 442
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 18 LGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
LG GK+ D +A HP+ S +YFEV+IV G Y+ +GL+ +D NR PG
Sbjct: 236 LGKGKSIVDVGLAQARHPL--STRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPG 290
>sp|A1D1S7|SSH4_NEOFI Protein ssh4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=ssh4 PE=3 SV=1
Length = 507
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 29 SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG------KYLSCG 80
SV+ P+P +YY+E KI K ++ IG++ + + RLPG YLS G
Sbjct: 209 SVQTNLPVPKQNDVYYWEAKIYEKPESTHISIGMTTKPYPLFRLPGFHKTSVAYLSTG 266
>sp|Q4WRW0|SSH4_ASPFU Protein ssh4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=ssh4 PE=3 SV=2
Length = 507
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 29 SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG------KYLSCG 80
SV+ P+P +YY+E KI K + IG++ + + RLPG YLS G
Sbjct: 209 SVQTNLPVPKQNDVYYWEAKIYEKPESTLISIGMTTKPYPLFRLPGFHKTSVAYLSTG 266
>sp|Q1E2D2|SSH4_COCIM Protein SSH4 OS=Coccidioides immitis (strain RS) GN=SSH4 PE=3 SV=1
Length = 494
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 29 SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
SV++ P+P +YY+E KI K + IG++ + + RLPG
Sbjct: 203 SVQSNLPVPKQNEVYYWEAKIYDKPETSLISIGMTTKPYPLFRLPG 248
>sp|A1CNW8|SSH4_ASPCL Protein ssh4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65
/ DSM 816 / NCTC 3887 / NRRL 1) GN=ssh4 PE=3 SV=1
Length = 511
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
SV+ P+P +YY+E KI K + + +G++ + + RLPG
Sbjct: 209 SVQTNLPVPKQNDVYYWEAKIYDKPENTLVSVGMTTKPYPLFRLPG 254
>sp|Q96UB6|SSH4_NEUCR Protein ssh-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ssh-4 PE=3 SV=1
Length = 500
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 29 SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG------KYLSCG 80
+V + P+P +YY+E KI K + + IG++ + + RLPG YLS G
Sbjct: 141 TVMSNLPVPKQNEVYYWEAKIYDKPENTLISIGMATKPYPLFRLPGFHKYSVAYLSNG 198
>sp|A6S3E0|SSH4_BOTFB Protein ssh4 OS=Botryotinia fuckeliana (strain B05.10) GN=ssh4 PE=3
SV=1
Length = 537
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 35 PIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
P+P +YY+E KI K + + IG++ + + RLPG
Sbjct: 210 PVPKQNEVYYWESKIYDKPENTLISIGVATKPYPLFRLPG 249
>sp|A7EQ00|SSH4_SCLS1 Protein ssh4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980
/ Ss-1) GN=ssh4 PE=3 SV=1
Length = 523
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 35 PIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
P+P +YY+E KI K + + IG++ + + RLPG
Sbjct: 196 PVPKQNEVYYWESKIYDKPENTLISIGVATKPYPLFRLPG 235
>sp|Q5M7T2|SPRY7_RAT SPRY domain-containing protein 7 OS=Rattus norvegicus GN=Spryd7
PE=2 SV=1
Length = 196
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 44 YFEVKIVSKGRDGYMGIGLSAQDVNMNRLP 73
YFE KI S G GIG++ Q VN+N++P
Sbjct: 66 YFEFKIQSTG---IWGIGVATQKVNLNQIP 92
>sp|Q3TFQ1|SPRY7_MOUSE SPRY domain-containing protein 7 OS=Mus musculus GN=Spryd7 PE=2
SV=2
Length = 196
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 44 YFEVKIVSKGRDGYMGIGLSAQDVNMNRLP 73
YFE KI S G GIG++ Q VN+N++P
Sbjct: 66 YFEFKIQSTG---IWGIGVATQKVNLNQIP 92
>sp|Q5W111|SPRY7_HUMAN SPRY domain-containing protein 7 OS=Homo sapiens GN=SPRYD7 PE=1
SV=2
Length = 196
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 44 YFEVKIVSKGRDGYMGIGLSAQDVNMNRLP 73
YFE KI S G GIG++ Q VN+N++P
Sbjct: 66 YFEFKIQSTG---IWGIGVATQKVNLNQIP 92
>sp|Q2T9X3|SPRY7_BOVIN SPRY domain-containing protein 7 OS=Bos taurus GN=SPRYD7 PE=2
SV=1
Length = 196
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 44 YFEVKIVSKGRDGYMGIGLSAQDVNMNRLP 73
YFE KI S G GIG++ Q VN+N++P
Sbjct: 66 YFEFKIQSTG---IWGIGVATQKVNLNQIP 92
>sp|O74497|YCRA_SCHPO SPRY domain-containing protein C285.10c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC285.10c PE=4 SV=1
Length = 382
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 3 NCYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGL 62
NCY + ++ S LG+ + ++ P+ +YYFEVK++ D + IGL
Sbjct: 135 NCYVKNKTELSF---LGN-----EECCMQTNLPLQRINEVYYFEVKLLDVPIDTLVSIGL 186
Query: 63 SAQDVNMNRLPG 74
+ + RLPG
Sbjct: 187 ATKPYPPFRLPG 198
>sp|Q217T7|Y1790_RHOPB UPF0260 protein RPC_1790 OS=Rhodopseudomonas palustris (strain
BisB18) GN=RPC_1790 PE=3 SV=1
Length = 170
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 26 DAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVN 68
D A+VR + +PPSC K+V++GRD Y L + D N
Sbjct: 86 DPANVRTLNWLPPSCA-----YKLVAEGRDLYWWHPLISGDPN 123
>sp|Q89QM1|Y3103_BRAJA UPF0260 protein blr3103 OS=Bradyrhizobium japonicum (strain USDA
110) GN=blr3103 PE=3 SV=1
Length = 171
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 28 ASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVN 68
A+VR + +PPSCG K+V++GRD Y L + D N
Sbjct: 88 ANVRTLNWLPPSCGY-----KLVAEGRDLYWWHPLVSGDPN 123
>sp|D3ZAP3|K1383_RAT Uncharacterized protein KIAA1383 homolog OS=Rattus norvegicus PE=4
SV=1
Length = 888
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 48 KIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDG 94
K V +G DG SA D N NR P + SC E++ WDG
Sbjct: 644 KAVGEGIDGKQVKAASAADTNENRPPSRKSSCESTSELQC----WDG 686
>sp|Q5ZHV7|SPRY7_CHICK SPRY domain-containing protein 7 OS=Gallus gallus GN=SPRYD7 PE=2
SV=1
Length = 196
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 44 YFEVKIVSKGRDGYMGIGLSAQDVNMNRLP 73
YFE KI S G GIG++ Q N+N++P
Sbjct: 66 YFEFKIQSTG---IWGIGVATQKANLNQIP 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,767,137
Number of Sequences: 539616
Number of extensions: 1354243
Number of successful extensions: 2360
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 47
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)