BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17215
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 59/77 (76%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKK+ELTYISLSFCP+S +PDSLAI+KS DFG++WQP QFYSSQC+K YGR IS
Sbjct: 131 SLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKIS 190
Query: 68 RGNEQEALCTDRHKKQG 84
+ NEQEA C + G
Sbjct: 191 KFNEQEARCINSQHDTG 207
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCD-----TSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEA 152
V+ +SVCG + PERYC+ +G C C+ + R+ LTDLNNPSNVTCWRS A
Sbjct: 56 VQASSVCGAQQPERYCELLRDGNAGECRSCE----QQRYGPAALTDLNNPSNVTCWRSGA 111
Query: 153 -QTSVNSLSASPDNVTLTLSLEK 174
+ SA PDNVTLTLSL K
Sbjct: 112 VNVPHDPDSAPPDNVTLTLSLGK 134
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+TY+SL FC S +P+S+AIYKS D+GK+W P QFYS+QC+K+Y + + I+
Sbjct: 139 SLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAIT 196
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CTD H
Sbjct: 197 KQNEQEAICTDSH 209
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 14/86 (16%)
Query: 96 QEVKVNSVCGLESPERYC-------DTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCW 148
+EVKV+S CG + P RYC + +CH+C+A P+ P +LTDLNNP N+TCW
Sbjct: 64 KEVKVSSTCG-KPPSRYCVVTEKGEEQVRSCHLCNASDPKRAHPPSFLTDLNNPHNLTCW 122
Query: 149 RSEAQTSVNSLSASPDNVTLTLSLEK 174
+S+ S P NVTLTLSL K
Sbjct: 123 QSD------SYVQYPHNVTLTLSLGK 142
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I+
Sbjct: 137 SLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPIT 194
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CTD H
Sbjct: 195 KQNEQEAVCTDSH 207
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 14/86 (16%)
Query: 96 QEVKVNSVCGLESPERYCDTSG-------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCW 148
++V+V+S CG P RYC S +CH+C+A P+ P +LTDLNNP N+TCW
Sbjct: 62 KDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCW 120
Query: 149 RSEAQTSVNSLSASPDNVTLTLSLEK 174
+SE N L P NVTLTLSL K
Sbjct: 121 QSE-----NYLQF-PHNVTLTLSLGK 140
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I+
Sbjct: 137 SLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPIT 194
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CTD H
Sbjct: 195 KQNEQEAVCTDSH 207
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 14/86 (16%)
Query: 96 QEVKVNSVCGLESPERYCDTSG-------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCW 148
++V+V+S CG P RYC S +CH+C++ P+ P +LTDLNNP N+TCW
Sbjct: 62 KDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCW 120
Query: 149 RSEAQTSVNSLSASPDNVTLTLSLEK 174
+SE P NVTLTLSL K
Sbjct: 121 QSENYLQF------PHNVTLTLSLGK 140
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I+
Sbjct: 137 SLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPIT 194
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CTD H
Sbjct: 195 KQNEQEAVCTDSH 207
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 14/86 (16%)
Query: 96 QEVKVNSVCGLESPERYCDTSG-------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCW 148
++V+V+S CG P RYC S +CH+C++ P+ P +LTDLNNP N+TCW
Sbjct: 62 KDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCW 120
Query: 149 RSEAQTSVNSLSASPDNVTLTLSLEK 174
+SE N L P NVTLTLSL K
Sbjct: 121 QSE-----NYLQF-PHNVTLTLSLGK 140
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I+
Sbjct: 137 SLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPIT 194
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CTD H
Sbjct: 195 KQNEQEAVCTDSH 207
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 14/86 (16%)
Query: 96 QEVKVNSVCGLESPERYCDTSG-------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCW 148
++V+V+S CG P RYC S +CH+C+A P+ P +LTDLNNP N+TCW
Sbjct: 62 KDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCW 120
Query: 149 RSEAQTSVNSLSASPDNVTLTLSLEK 174
+SE N L P NVTLTLSL K
Sbjct: 121 QSE-----NYLQF-PHNVTLTLSLGK 140
>sp|Q24567|NETA_DROME Netrin-A OS=Drosophila melanogaster GN=NetA PE=2 SV=2
Length = 726
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 51/71 (71%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFELTY+ L CP + +PDS+ IYKS D G SWQP QF+SSQC++L+GR A
Sbjct: 133 SLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTG 192
Query: 68 RGNEQEALCTD 78
R NE EA C+D
Sbjct: 193 RHNEHEARCSD 203
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 98 VKVNSVCGLESPERYC---DTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQT 154
V +S CG +RYC D +CH CD P FPA LTDLNN +NVTCWRSE
Sbjct: 63 VVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRSEP-- 120
Query: 155 SVNSLSASPDNVTLTLSLEK 174
++ S DNVTLTLSL K
Sbjct: 121 ----VTGSGDNVTLTLSLGK 136
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFELTY+S+ FC S PDS+A+YKS DFGK+W P QFYSS+C++++GR I+
Sbjct: 134 SLGKKFELTYVSMHFC--SRLPDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSIT 191
Query: 68 RGNEQEALCTDRH 80
+ NEQEA+CT H
Sbjct: 192 KSNEQEAVCTASH 204
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 98 VKVNSVCGLESPERYCDTSGA--------CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWR 149
V + CG P++YC C CDA + PA LTDLN+ N+TCW
Sbjct: 60 VIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHPASLLTDLNSIGNMTCW- 118
Query: 150 SEAQTSVNSLSASPDNVTLTLSLEK 174
V++ S SP NV+LTLSL K
Sbjct: 119 ------VSTPSLSPQNVSLTLSLGK 137
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GKKFE+ Y+SL FC S +P+S AI+KS D+GK+W P Q+YSSQC+K+YG+ + ++
Sbjct: 109 SLGKKFEVVYVSLQFC--SPRPESTAIFKSMDYGKTWVPYQYYSSQCRKIYGKPSKATVT 166
Query: 68 RGNEQEALCTD 78
+ NEQEALCTD
Sbjct: 167 KQNEQEALCTD 177
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 16/79 (20%)
Query: 96 QEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTS 155
+EV+ +S CG + P R+CD A PR P YLTDLN +N+TCWRSE
Sbjct: 50 KEVQASSTCG-KPPTRHCD---------ASDPRRAHPPAYLTDLNTAANMTCWRSE---- 95
Query: 156 VNSLSASPDNVTLTLSLEK 174
+L P NVTLTLSL K
Sbjct: 96 --TLHHLPHNVTLTLSLGK 112
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGR-TATGVISR 68
GK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C YGR A
Sbjct: 112 GKAFELVFVSLRFC--SAPPASVALLKSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPA 169
Query: 69 GNEQEALCTDRHKKQGKG 86
G EALC Q G
Sbjct: 170 GPGPEALCFPAPLAQPDG 187
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 96 QEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTS 155
+EV +S CG A CDA PR LT ++ CWRSE
Sbjct: 51 REVLASSTCGRP----------ATRACDASDPRRAHSPALLTSPGGTASPLCWRSE---- 96
Query: 156 VNSLSASPDNVTLTLSLEK 174
SL +P NVTLT+ L K
Sbjct: 97 --SLPRAPLNVTLTVPLGK 113
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGR-TATGVISR 68
GK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C YGR A
Sbjct: 112 GKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWVPLGFFSSSCTLDYGRLPAPADGPS 169
Query: 69 GNEQEALCTDRHKKQGKG 86
G EALC + Q G
Sbjct: 170 GPGPEALCFPAPQAQPDG 187
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 16/79 (20%)
Query: 96 QEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTS 155
+EV +S CG A VCD+ P+ A+ LT ++ CWRS+
Sbjct: 51 REVLASSTCGRS----------ANRVCDSSDPQRAHSADLLTSAPGTASPLCWRSDL--- 97
Query: 156 VNSLSASPDNVTLTLSLEK 174
L +P NVTLT+ L K
Sbjct: 98 ---LQQAPFNVTLTVPLGK 113
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG 69
GK F++TY+ L F + +P+S AIYK W P Q+YS C+K Y + G I G
Sbjct: 124 GKSFDITYVRLKF--HTSRPESFAIYKRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTG 181
Query: 70 -NEQEALCTD 78
+EQ+ALCTD
Sbjct: 182 EDEQQALCTD 191
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSE 151
V + CG PE +C +G +CH+C+A PR A YLTD N P T W+S
Sbjct: 47 VVATNTCG-SPPEEFCVQTGVTGVTKSCHICNAADPRLHHGAVYLTDYNQPVQPTWWQS- 104
Query: 152 AQTSVNSLSASPDNVTLTLSLEK 174
QT + + P+++ LTL L K
Sbjct: 105 -QTMLAGIQY-PNSINLTLHLGK 125
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SR 68
GK F++TY+ L F + +P+S AIYK W P Q+YS C+ Y + G I +
Sbjct: 140 GKAFDITYVRLKF--HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTG 197
Query: 69 GNEQEALCTD 78
G+EQ+ALCTD
Sbjct: 198 GDEQQALCTD 207
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSE 151
V + CG PE YC +G +CH+CDAG P + A +LTD NN ++ T W+S
Sbjct: 63 VVATNTCGT-PPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQS- 120
Query: 152 AQTSVNSLSASPDNVTLTLSLEK 174
QT + + P ++ LTL L K
Sbjct: 121 -QTMLAGVQ-YPSSINLTLHLGK 141
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SR 68
GK F++TY+ L F + +P+S AIYK W P Q+YS C+ Y + G I +
Sbjct: 138 GKAFDITYVRLKF--HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTG 195
Query: 69 GNEQEALCTD 78
G+EQ+ALCTD
Sbjct: 196 GDEQQALCTD 205
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSE 151
V + CG PE YC +G +CH+CDAG + A +LTD NN ++ T W+S
Sbjct: 61 VVATNTCGT-PPEEYCVQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQS- 118
Query: 152 AQTSVNSLSASPDNVTLTLSLEK 174
QT + + P+++ LTL L K
Sbjct: 119 -QTMLAGVQ-YPNSINLTLHLGK 139
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG 69
GK F++TY+ L F + +P+S A+YK W P Q+YS C+K Y + G I G
Sbjct: 123 GKAFDITYVRLKF--HTSRPESFALYKRTHEDGPWIPYQYYSGSCEKTYQKFNRGFIRTG 180
Query: 70 -NEQEALCTD 78
+EQ+ALCTD
Sbjct: 181 EDEQQALCTD 190
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSE 151
V + CG PE YC +G +CH+CD+G + AEYLTD NN + +T W+S
Sbjct: 46 VVATNTCGT-PPEEYCVQTGVTGVTKSCHICDSGQFHLQHGAEYLTDYNNQAEITWWQS- 103
Query: 152 AQTSVNSLSASPDNVTLTLSLEK 174
QT + + P + LTL L K
Sbjct: 104 -QTMLAGIQ-YPSTINLTLHLGK 124
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 5 EGQSY----------GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 54
EGQ Y GK F++TY+ L F S +P+S IYK W+P QFYS C
Sbjct: 127 EGQQYPTTTNLTLVLGKSFDITYVRLKFI--SPRPESFTIYKKTHTDSEWEPWQFYSGSC 184
Query: 55 KKLYGRTATGVISRGNEQEALCT 77
+ YG + I GNE A CT
Sbjct: 185 RATYGLSDRAPILPGNEATAQCT 207
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 97 EVKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRS 150
EV+V + CG + P ++C SG C CD PA+YLTD N +N T W+S
Sbjct: 63 EVQVTNTCGTKRPTKFCVQSGHTGQRSVCETCDDRHEGFSHPAKYLTDFNVGNNETWWQS 122
Query: 151 EAQTSVNSLSASPDNVTLTLSLEK 174
+ ++ P LTL L K
Sbjct: 123 D---TMQEGQQYPTTTNLTLVLGK 143
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG 69
GK +E+TY+ L F + +P+S AIYK W+P QFYS+ C+K YGR + G
Sbjct: 125 GKAYEITYVRLKF--HTSRPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPG 182
Query: 70 -NEQEALCT 77
+E+ A CT
Sbjct: 183 EDERVAFCT 191
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 98 VKVNSVCGLESPERYCDTSGA------CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSE 151
+ + CG PE +C GA C CDA P+ A YLTD ++ T W+S
Sbjct: 48 AQASHTCG-SPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHSQDESTWWQS- 105
Query: 152 AQTSVNSLSASPDNVTLTLSLEK 174
S+ P +V +TL L K
Sbjct: 106 --PSMAFGVQYPTSVNITLRLGK 126
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 67
S GK +E+TY+ L F + +P+S AIYK W+P Q+YS+ C+K YGR +
Sbjct: 132 SLGKAYEITYVRLKF--HTSRPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLR 189
Query: 68 RG-NEQEALCT 77
G +E+ A CT
Sbjct: 190 PGEDERVAFCT 200
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 96 QEVKVNSVCGLESPERYCDTSGA------CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWR 149
+ + + CG PE +C GA C CD P R A YLTD ++P + T W+
Sbjct: 55 RRAEASHTCG-RPPEDFCPHVGAPGAGLQCQRCDDADPGRRHDASYLTDFHSPDDSTWWQ 113
Query: 150 SEAQTSVNSLSASPDNVTLTLSLEK 174
S S+ P +V LTLSL K
Sbjct: 114 S---PSMAFGVQYPTSVNLTLSLGK 135
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2
SV=2
Length = 1639
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG 69
GK +++TY+ + F +S +P+S IYK W P QFYS+ C+ Y + I +G
Sbjct: 153 GKSYDITYVRILF--RSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKG 210
Query: 70 N-EQEALCT 77
E ALCT
Sbjct: 211 EGEAHALCT 219
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ + F KS +P ++ + +SQDFGK+W+P +++++ C +G V+ +G
Sbjct: 124 EFYFTHLIMVF--KSPRPAAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG-- 178
Query: 72 QEALCTDRH 80
A+CT R+
Sbjct: 179 --AICTSRY 185
>sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3
Length = 539
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SYGKKFELT-YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV- 65
S+ K ELT I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V
Sbjct: 137 SWSKTIELTDNIVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVK 194
Query: 66 -ISRGNEQEALCTDRH 80
+S+ E +CT+ +
Sbjct: 195 DLSQHTVLEIICTEEY 210
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ + F KS +P ++ + +SQDFGK+W+P +++++ C +G V+ +G
Sbjct: 124 EFYFTHLIMMF--KSPRPAAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG-- 178
Query: 72 QEALCTDRH 80
A+CT ++
Sbjct: 179 --AICTSKY 185
>sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2
Length = 539
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SYGKKFELT-YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV- 65
S+ K ELT I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V
Sbjct: 137 SWSKTIELTDNIVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVK 194
Query: 66 -ISRGNEQEALCTDRH 80
+S+ E +CT+ +
Sbjct: 195 DLSQHTVLEIICTEEY 210
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ + F KS +P ++ + +SQDFGK+W+P +++++ C +G V+ +G
Sbjct: 124 EFYFTHLIVMF--KSPRPAAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG-- 178
Query: 72 QEALCTDRH 80
A+CT ++
Sbjct: 179 --AICTSKY 185
>sp|Q96CW9|NTNG2_HUMAN Netrin-G2 OS=Homo sapiens GN=NTNG2 PE=1 SV=2
Length = 530
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 8 SYGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV- 65
S+ K ELT + ++F + +P + + KS D G++WQP QFY+ C + +G +A
Sbjct: 126 SWNKTVELTDDVVMTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRAR 183
Query: 66 -ISRGNEQEALCTDRHKKQGKGK 87
+S + LCT+ + + K
Sbjct: 184 DMSSSSAHRVLCTEEYSRWAGSK 206
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVI 66
G+ F + Y+ + F S +PD + +S DFG+++QP QF++S C + +G I
Sbjct: 149 GQVFHVAYVLIKFA-NSPRPDLWVLERSMDFGRTYQPWQFFASSKRDCLERFGPQTLERI 207
Query: 67 SRGNEQEALCTDRHKK 82
+R + A+CT + +
Sbjct: 208 TR--DDAAICTTEYSR 221
>sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus GN=Ntng2 PE=1 SV=2
Length = 589
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 8 SYGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV- 65
S+ K ELT + ++F + +P + + KS D G++WQP QFY+ C + +G +A
Sbjct: 126 SWNKSVELTDDVVVTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRAR 183
Query: 66 -ISRGNEQEALCTDRHKKQGKGK 87
+S + LCT+ + + K
Sbjct: 184 DMSPSSAHRVLCTEEYSRWAGSK 206
>sp|Q01635|LAMB1_CHICK Laminin subunit beta-1 (Fragment) OS=Gallus gallus GN=LAMB1 PE=2
SV=1
Length = 303
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ ++F K+ +P ++ I +S DFGK+WQ ++++ C+ + +TG + + +
Sbjct: 62 EFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVD- 118
Query: 72 QEALCTDRH 80
+ +C R+
Sbjct: 119 -DIICDSRY 126
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVI 66
G+ F + YI + F S +PD + +S DFG ++ P Q+++ C K +GR A +
Sbjct: 148 GQLFHVAYILIKFA-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGREANMAV 206
Query: 67 SRGNEQEALCTDRHKK 82
+R + + LC + +
Sbjct: 207 TR--DDDVLCVTEYSR 220
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISR- 68
G+ F + Y+ + F S +PD + +S DFG ++QP QF++S + R + R
Sbjct: 154 GQVFHVAYVLIKFA-NSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERI 212
Query: 69 GNEQEALCTDRHKK 82
+ + +CT + +
Sbjct: 213 TQDDDVICTTEYSR 226
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+ + +TG + + +
Sbjct: 130 EFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFPGISTGPMKKVD- 186
Query: 72 QEALCTDRH 80
+ +C R+
Sbjct: 187 -DIICDSRY 194
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+ + +TG + + +
Sbjct: 130 EFHFTHLIMTF--KTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTGPMKKVD- 186
Query: 72 QEALCTDRH 80
+ +C R+
Sbjct: 187 -DIICDSRY 194
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 96 QEVKVNSVCGLESPERYCDTSGA-----CHVCDAGSP 127
Q++ V S CGL PE YC S C +CD+ P
Sbjct: 48 QKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSRDP 84
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 13 FELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 64
F+ +++ L+F KS +P S+ + +S+DFG++W+ ++++ C + + G
Sbjct: 126 FQFSHLILTF--KSFRPASMLVERSKDFGRTWKVFRYFAEDCANSFPGISEG 175
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 10 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVI 66
G+ F + YI + F S +PD + +S DFG ++ P Q+++ C + +G+ A I
Sbjct: 145 GQLFHVAYILIKFA-NSPRPDLWILERSVDFGSTYSPWQYFAHSRRDCVEQFGQEANMAI 203
Query: 67 SRGNEQEALCTDRHKK 82
++ + + LC + +
Sbjct: 204 TQ--DDQMLCVTEYSR 217
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 11 KKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 64
K+ +L I + F K + P + I +S DFGK+W+ Q+ ++ C + + G
Sbjct: 112 KRMQLQDIMMDF--KGLTPAGMLIERSSDFGKTWRVYQYLATDCASTFPQVHQG 163
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 8 SYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTATG 64
++ ++F + Y+ + S +P + KS D+GK+W P Q +S + C+ +G+
Sbjct: 120 NFEQEFHVAYLFIRM-GNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYK 178
Query: 65 VISRGNEQEALCTDRHKK 82
I+R + + +CT + K
Sbjct: 179 PITR--DDDVICTTEYSK 194
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 38.1 bits (87), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 11 KKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 64
++F+L + + F + P + I +S DFGK+W+ Q+ ++ C + R G
Sbjct: 112 RRFQLQEVMMEF--QGPMPAGMLIERSSDFGKTWRVYQYLAADCTSTFPRVRQG 163
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 54
+F T++ ++F K+ +P ++ + +S DFG++W+ +++S C
Sbjct: 145 EFHFTHLIMTF--KTFRPAAMLVERSADFGRTWRVYRYFSYDC 185
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1
SV=4
Length = 1788
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNE 71
+F T++ ++F + +P ++ I +S DFG++W ++++ CK+ + T + N
Sbjct: 148 EFHFTHLIITF--TTFRPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVPTVL---ENI 202
Query: 72 QEALCTDRH 80
+ +CT R+
Sbjct: 203 TDVMCTSRY 211
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 54
+F T++ ++F K+ +P ++ + +S DFG++W +++S C
Sbjct: 142 EFHFTHLIMTF--KTFRPAAMLVERSADFGRTWHVYRYFSYDC 182
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 12 KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 54
+F T++ ++F K+ +P ++ + +S DFG++W +++S C
Sbjct: 145 EFHFTHLIMTF--KTFRPAAMLVERSADFGRTWHVYRYFSYDC 185
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/52 (21%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 13 FELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 64
F +++ L+F K+ +P ++ + +S D+G +W+ ++++ C + +G
Sbjct: 124 FRFSHLILTF--KTFRPAAMLVERSTDYGHNWKVFKYFAKDCATSFPNITSG 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,915,397
Number of Sequences: 539616
Number of extensions: 2573323
Number of successful extensions: 5029
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4929
Number of HSP's gapped (non-prelim): 79
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)