Query psy17215
Match_columns 174
No_of_seqs 213 out of 666
Neff 6.0
Searched_HMMs 29240
Date Sat Aug 17 00:49:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17215.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17215hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbd_A Netrin-G2, laminet-2; l 99.9 2.2E-27 7.5E-32 206.1 7.0 81 2-84 103-186 (338)
2 4aqs_A Laminin subunit beta-1; 99.9 5E-27 1.7E-31 212.3 9.6 81 2-86 103-183 (525)
3 4aqt_A Laminin subunit gamma-1 99.9 4.5E-27 1.5E-31 206.8 6.2 93 69-174 12-110 (375)
4 3zyj_B Netrin-G1; cell adhesio 99.9 1.2E-26 4.1E-31 206.7 9.1 82 2-85 131-215 (426)
5 2y38_A Laminin subunit alpha-5 99.9 2.5E-26 8.7E-31 203.6 10.5 79 2-83 107-188 (403)
6 4aqt_A Laminin subunit gamma-1 99.9 5.3E-26 1.8E-30 200.0 10.2 81 2-84 101-182 (375)
7 3tbd_A Netrin-G2, laminet-2; l 99.9 1.1E-23 3.7E-28 182.9 6.1 90 71-174 17-112 (338)
8 3zyj_B Netrin-G1; cell adhesio 99.9 2.3E-23 7.8E-28 185.7 6.2 90 71-174 45-140 (426)
9 2y38_A Laminin subunit alpha-5 99.9 3.7E-23 1.3E-27 183.4 4.1 88 70-174 5-116 (403)
10 4aqs_A Laminin subunit beta-1; 99.9 2.4E-22 8.2E-27 181.7 5.0 90 69-174 11-112 (525)
11 2jda_A Yecbm32; hypothetical p 96.1 0.0084 2.9E-07 43.7 5.3 44 4-48 45-88 (145)
12 4a3z_A GH89_CBM32, alpha-N-ace 95.8 0.0052 1.8E-07 47.3 3.1 53 77-174 23-75 (161)
13 4a3z_A GH89_CBM32, alpha-N-ace 95.2 0.026 9.1E-07 43.3 5.2 44 3-48 67-110 (161)
14 3f2z_A Uncharacterized protein 95.0 0.057 2E-06 40.3 6.5 45 3-48 55-101 (159)
15 4a42_A GH89_CBM32-4, alpha-N-a 94.6 0.036 1.2E-06 41.6 4.4 40 5-47 65-104 (149)
16 3ggl_A Putative chitobiase; X- 94.2 0.11 3.6E-06 39.4 6.3 45 3-48 65-111 (169)
17 2w1s_A Hyaluronoglucosaminidas 94.0 0.088 3E-06 41.4 5.7 46 4-50 67-116 (192)
18 4a41_A GH89_CBM32-5, alpha-N-a 94.0 0.074 2.5E-06 40.2 5.1 45 3-48 71-117 (161)
19 2j1a_A Hyaluronidase, CBM32; p 94.0 0.053 1.8E-06 39.1 4.1 44 3-47 53-98 (150)
20 2wuh_A Discoidin domain recept 92.9 0.17 5.8E-06 39.3 5.5 43 5-48 75-121 (178)
21 1czt_A Protein (coagulation fa 92.6 0.082 2.8E-06 40.1 3.3 43 5-48 59-104 (160)
22 3bn6_A Lactadherin; anticoagul 92.4 0.091 3.1E-06 39.6 3.3 44 5-49 60-106 (158)
23 3hnm_A Putative chitobiase; PS 92.2 0.2 7E-06 38.8 5.2 48 2-50 64-117 (172)
24 3cqo_A FBP32; F-lectin, fucole 92.0 0.12 4.1E-06 42.6 3.8 36 5-40 53-92 (293)
25 3eyp_A Putative alpha-L-fucosi 91.9 0.098 3.3E-06 46.8 3.4 33 130-174 342-374 (469)
26 2yc2_A IFT25, intraflagellar t 91.5 0.11 3.8E-06 38.7 2.8 22 129-153 25-46 (139)
27 2yc2_A IFT25, intraflagellar t 91.2 0.29 9.8E-06 36.3 4.8 41 3-47 49-90 (139)
28 3lei_A Platelet aggregation fa 91.1 0.16 5.3E-06 38.0 3.3 55 80-174 9-63 (153)
29 2qqi_A Neuropilin-1; VEGF rece 91.0 0.36 1.2E-05 40.3 5.8 43 5-48 217-262 (318)
30 1tvg_A LOC51668 protein; cell 90.8 0.15 5.2E-06 38.9 3.0 22 129-153 33-54 (153)
31 1tvg_A LOC51668 protein; cell 90.2 0.38 1.3E-05 36.7 4.8 40 3-47 57-98 (153)
32 3hny_M Coagulation factor VIII 87.9 0.39 1.3E-05 36.3 3.4 43 5-48 61-106 (159)
33 4gwi_A Lectinolysin, platelet 87.8 0.41 1.4E-05 36.1 3.5 55 80-174 9-63 (153)
34 2qqi_A Neuropilin-1; VEGF rece 87.3 0.53 1.8E-05 39.3 4.1 43 5-48 58-105 (318)
35 2qqj_A Neuropilin-2; VEGF rece 87.2 0.48 1.6E-05 39.6 3.9 43 5-48 59-106 (325)
36 2vm9_A Discoidin-2, discoidin 86.9 0.74 2.5E-05 37.6 4.7 43 5-48 63-106 (257)
37 4deq_A Neuropilin-1, vascular 86.6 0.84 2.9E-05 36.6 4.8 43 5-48 57-104 (218)
38 1w8o_A Bacterial sialidase; 3D 85.3 1.4 4.6E-05 39.3 6.0 45 3-48 506-553 (601)
39 3lei_A Platelet aggregation fa 85.2 1.5 5E-05 32.5 5.3 42 4-46 56-101 (153)
40 4a41_A GH89_CBM32-5, alpha-N-a 84.8 0.55 1.9E-05 35.2 2.7 36 130-174 44-79 (161)
41 2qqj_A Neuropilin-2; VEGF rece 84.5 1.1 3.6E-05 37.5 4.6 45 5-50 218-271 (325)
42 4a4a_A Alpha-N-acetylglucosami 84.1 0.65 2.2E-05 44.9 3.5 50 78-174 22-71 (914)
43 4a4a_A Alpha-N-acetylglucosami 84.0 1.1 3.6E-05 43.4 4.9 44 3-49 63-106 (914)
44 2qqm_A Neuropilin-1; VEGF rece 83.4 1.2 4.1E-05 38.8 4.7 43 5-48 349-394 (450)
45 2qqo_A Neuropilin-2; VEGF rece 81.8 1.5 5.1E-05 38.3 4.7 45 5-50 347-400 (460)
46 3f2z_A Uncharacterized protein 81.5 1.2 4E-05 32.9 3.4 38 129-174 26-63 (159)
47 3hnm_A Putative chitobiase; PS 81.0 0.76 2.6E-05 35.5 2.2 37 129-174 37-73 (172)
48 1k12_A Lectin; beta barrel, pr 80.2 0.92 3.1E-05 34.0 2.4 59 80-174 8-67 (158)
49 1k3i_A Galactose oxidase precu 79.8 1.7 5.9E-05 39.0 4.5 44 3-47 70-117 (656)
50 2v72_A CBM32, EXO-alpha-sialid 79.1 1.9 6.5E-05 30.5 3.7 40 3-43 53-94 (143)
51 2qqk_A Neuropilin-2; VEGF rece 78.6 2 6.8E-05 38.6 4.5 44 5-49 466-518 (579)
52 2j1v_A Fucolectin-related prot 78.0 2.1 7.3E-05 31.9 3.9 19 78-105 13-31 (151)
53 3cqo_A FBP32; F-lectin, fucole 77.3 1.3 4.6E-05 36.2 2.7 56 80-174 3-59 (293)
54 2j1a_A Hyaluronidase, CBM32; p 75.5 1.5 5.2E-05 31.1 2.3 37 130-174 25-61 (150)
55 2v5d_A O-GLCNACASE NAGJ; famil 74.1 2.1 7.1E-05 40.2 3.4 45 3-48 640-686 (737)
56 2qqm_A Neuropilin-1; VEGF rece 73.8 2.6 8.9E-05 36.6 3.8 43 5-48 190-237 (450)
57 1sdd_B Coagulation factor V; c 72.9 2 6.9E-05 39.2 3.0 54 4-58 385-441 (647)
58 3ggl_A Putative chitobiase; X- 72.0 2.3 7.9E-05 31.8 2.7 37 130-174 37-73 (169)
59 4ag4_A Epithelial discoidin do 71.8 5.3 0.00018 34.3 5.2 43 5-48 62-108 (351)
60 4gwi_A Lectinolysin, platelet 71.3 4 0.00014 30.5 3.9 44 4-47 56-102 (153)
61 3eyp_A Putative alpha-L-fucosi 69.7 4.7 0.00016 35.8 4.6 44 3-47 366-410 (469)
62 2j22_A Fucolectin-related prot 69.3 4.7 0.00016 29.9 3.9 17 80-105 12-28 (148)
63 1jhj_A APC10; beta sandwich, j 69.0 2.3 7.8E-05 33.1 2.1 30 130-170 38-67 (171)
64 1sdd_B Coagulation factor V; c 68.7 2.5 8.5E-05 38.6 2.6 44 5-49 546-592 (647)
65 1gqp_A DOC1/APC10; cell cycle, 66.2 3.9 0.00013 33.2 3.0 31 130-171 69-99 (221)
66 2ydt_A EXO-1,5-alpha-L-arabino 65.1 6.4 0.00022 33.6 4.3 22 28-49 53-74 (367)
67 2qqo_A Neuropilin-2; VEGF rece 64.8 5.4 0.00018 34.7 3.9 43 5-48 188-235 (460)
68 2v72_A CBM32, EXO-alpha-sialid 64.5 3.7 0.00013 28.9 2.4 36 130-174 26-61 (143)
69 2qqk_A Neuropilin-2; VEGF rece 62.7 6 0.00021 35.4 3.9 43 5-48 307-354 (579)
70 3ues_A Alpha-1,3/4-fucosidase; 61.4 2.8 9.6E-05 37.5 1.4 32 131-174 368-399 (478)
71 4gz9_A Neuropilin-1, A5 protei 60.6 10 0.00036 34.0 5.1 44 5-49 467-513 (577)
72 2cho_A Glucosaminidase, hexosa 59.2 2.9 9.8E-05 39.3 1.1 43 4-48 630-672 (716)
73 3a72_A EXO-arabinanase; arabin 58.1 10 0.00034 32.2 4.3 22 29-50 49-70 (355)
74 4gz9_A Neuropilin-1, A5 protei 56.1 14 0.00047 33.3 5.1 43 5-48 308-355 (577)
75 2ydt_A EXO-1,5-alpha-L-arabino 55.9 6.6 0.00023 33.5 2.8 21 29-49 118-138 (367)
76 3a72_A EXO-arabinanase; arabin 53.8 7.7 0.00026 32.9 2.8 22 30-51 114-135 (355)
77 1k12_A Lectin; beta barrel, pr 51.8 19 0.00063 26.6 4.4 34 5-38 61-96 (158)
78 3ues_A Alpha-1,3/4-fucosidase; 49.9 19 0.00065 32.1 4.9 44 4-48 392-436 (478)
79 2r7e_B Coagulation factor VIII 49.0 5.6 0.00019 37.5 1.3 43 5-48 509-554 (770)
80 2r7e_B Coagulation factor VIII 48.0 6.5 0.00022 37.0 1.6 43 5-48 668-713 (770)
81 2wn3_A Discoidin-1 subunit A; 46.6 22 0.00074 28.8 4.4 40 8-48 63-105 (254)
82 2j1v_A Fucolectin-related prot 41.3 33 0.0011 25.2 4.3 35 5-39 63-99 (151)
83 2yfu_A Carbohydrate binding fa 38.2 39 0.0013 25.5 4.3 45 4-48 46-94 (155)
84 2e26_A Reelin, reeler protein; 34.5 42 0.0014 31.7 4.7 23 30-52 300-322 (725)
85 2sli_A Intramolecular trans-si 34.4 19 0.00064 33.3 2.4 21 29-49 242-262 (679)
86 2zxq_A Endo-alpha-N-acetylgala 34.3 8.4 0.00029 38.8 0.0 46 3-48 1272-1321(1376)
87 2ddu_A Reelin; beta-jelly-roll 34.2 28 0.00095 30.4 3.3 21 30-50 99-119 (387)
88 2jkb_A Sialidase B; intramolec 33.7 20 0.00067 33.2 2.4 24 28-51 262-285 (686)
89 2ddu_A Reelin; beta-jelly-roll 32.8 48 0.0016 28.9 4.5 22 30-51 311-332 (387)
90 2j22_A Fucolectin-related prot 32.5 27 0.00092 25.7 2.6 19 5-23 60-78 (148)
91 1w0p_A Sialidase; hydrolase, n 31.1 19 0.00064 34.0 1.8 22 31-52 259-280 (781)
92 1w8o_A Bacterial sialidase; 3D 30.8 31 0.001 30.4 3.1 22 31-52 52-73 (601)
93 3f6k_A Sortilin; protein sorti 30.1 48 0.0016 30.8 4.3 22 28-49 61-82 (685)
94 1k3i_A Galactose oxidase precu 29.7 27 0.00093 31.1 2.6 38 130-174 41-78 (656)
95 2bf6_A Sialidase, EXO-alpha-si 28.3 28 0.00095 29.9 2.3 22 31-52 56-77 (449)
96 2w20_A Sialidase A; secreted, 27.2 27 0.00094 30.3 2.1 21 32-52 58-78 (471)
97 2v5d_A O-GLCNACASE NAGJ; famil 23.4 37 0.0013 31.7 2.3 37 130-174 612-648 (737)
98 2xbg_A YCF48-like protein; pho 23.2 40 0.0014 27.1 2.2 16 33-48 100-115 (327)
99 1so7_A Sialidase 2; neuraminid 21.5 45 0.0015 27.5 2.2 22 30-51 124-145 (382)
100 2xu8_A PA1645; structural geno 21.1 31 0.0011 24.9 1.0 16 31-50 39-54 (116)
101 2xbg_A YCF48-like protein; pho 20.0 53 0.0018 26.4 2.3 17 33-49 57-73 (327)
No 1
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=99.94 E-value=2.2e-27 Score=206.07 Aligned_cols=81 Identities=30% Similarity=0.556 Sum_probs=74.7
Q ss_pred ceeEEeeCCCeEEEE-EEEEEeeeCCCCCCeEEEEEecCCCCCceeeecchhhhhhhcCCCCCCC--cccCCCccccccc
Q psy17215 2 HFCEGQSYGKKFELT-YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTD 78 (174)
Q Consensus 2 ~v~ltldL~~~f~v~-~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qyfa~~C~~~Fg~~~~~~--~~~~~~~~~~C~p 78 (174)
.|||||||+|+|||+ ||+|+|+ ||||++|+||||+|+|++|+||||||.||.+.|||+++.. +...++++++|++
T Consensus 103 ~VnlTL~L~k~felt~~iil~F~--spRP~sm~ierS~D~G~tW~P~QYfA~dC~~~Fg~~~~~~~~~~~~~~~eviCt~ 180 (338)
T 3tbd_A 103 EANITLSWNKTVELTDDVVMTFE--YGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMSSSSAHRVLCTE 180 (338)
T ss_dssp CEEEEEEEEEEEEECSCEEEEES--SCCCSEEEEEEESSTTSSCEEEEEEESSHHHHHSCCBCCGGGCCGGGTTCCCEEC
T ss_pred cceEEEcCCCeEEEEEEEEeecC--CCCCCeEEEEeccCCCCCceeehhhhhhhHHhcCCCCccccCccCCCCCccEECC
Confidence 599999999999999 7999999 9999999999999999999999999999999999998763 3346789999999
Q ss_pred cccccC
Q psy17215 79 RHKKQG 84 (174)
Q Consensus 79 ~~s~la 84 (174)
+|+++.
T Consensus 181 ~yS~~~ 186 (338)
T 3tbd_A 181 EYSRWA 186 (338)
T ss_dssp TTTTTT
T ss_pred CCCCCC
Confidence 999864
No 2
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.94 E-value=5e-27 Score=212.29 Aligned_cols=81 Identities=20% Similarity=0.502 Sum_probs=75.5
Q ss_pred ceeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeeecchhhhhhhcCCCCCCCcccCCCcccccccccc
Q psy17215 2 HFCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHK 81 (174)
Q Consensus 2 ~v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qyfa~~C~~~Fg~~~~~~~~~~~~~~~~C~p~~s 81 (174)
+|||||||+|+|||+||+|+|. ||||++||||||+|+|++|+||||||.||.++|||+++.++ .+.++|+|+.+|+
T Consensus 103 ~v~itl~l~~~~~~~~v~~~f~--s~rP~~~~ieks~d~g~tw~p~qy~a~~C~~~f~~~~~~~~--~~~~~v~Ct~~~s 178 (525)
T 4aqs_A 103 NVTIQLDLEAEFHFTHLIMTFK--TFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTGPM--KKVDDIICDSRYS 178 (525)
T ss_dssp CCEEEEEEEEEEEEEEEEEEES--SCCCSEEEEEEESSTTSSCEEEEEEESSTTTTSSSSCCSCC--SSTTCCCEECTTC
T ss_pred CeEEEEcCCCeEEEEEEEEEEE--CCCCCeEEEEEecCCCCCCcceeeehhhhhhhcCCCCCCCC--CCCCcceecccCC
Confidence 6999999999999999999999 99999999999999999999999999999999999998776 5578999999999
Q ss_pred ccCCC
Q psy17215 82 KQGKG 86 (174)
Q Consensus 82 ~la~g 86 (174)
++...
T Consensus 179 ~~~p~ 183 (525)
T 4aqs_A 179 DIEPS 183 (525)
T ss_dssp CSCST
T ss_pred CCCCC
Confidence 87543
No 3
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.93 E-value=4.5e-27 Score=206.84 Aligned_cols=93 Identities=32% Similarity=0.629 Sum_probs=84.7
Q ss_pred CCCccccccccccccCCCcccccccccceeeEeccccCCCCceeeeccC------cccccCCCCCCCCCCCccccccCCC
Q psy17215 69 GNEQEALCTDRHKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRFPAEYLTDLNNP 142 (174)
Q Consensus 69 ~~~~~~~C~p~~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~------~C~~Cd~~~p~~~Hp~~~ltD~~~~ 142 (174)
.+.....|+|++.|||+|+ +|.|+|||| .+||+||++++ +|++||+++|+++||+++|||.++.
T Consensus 12 ~~~~p~~C~P~~~N~a~~~---------~i~assTCG-~~pe~yC~~~~~~~~~~~C~~Cda~~p~~~Hp~~~~~D~~~~ 81 (375)
T 4aqt_A 12 EGGRPQRCMPEFVNAAFNV---------TVVATNTCG-TPPEEYCVQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQ 81 (375)
T ss_dssp TTCCBCCCCCCCEETTTTC---------CCEESCCTT-SSCEEEECCC----CCCCEEEECSSSTTTCCCGGGGSSCCCS
T ss_pred CCCCcCccCCchhhhccCC---------eeeEecCCC-CCCcCeEEecCCcccCCcCCccCCCChhhhCCHhheeccCCC
Confidence 3456788999999999999 999999999 58999999863 6999999999999999999999999
Q ss_pred CCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 143 SNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 143 ~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
++.|||||+++. .+.++|++|||||||||
T Consensus 82 ~~~TwWQS~~~~---~~~~~~~~VtitLdL~~ 110 (375)
T 4aqt_A 82 ADTTWWQSQTML---AGVQYPNSINLTLHLGK 110 (375)
T ss_dssp SSCCCEECCCGG---GTCSSSCCEEEEEEEEE
T ss_pred CCCceEECCCcc---ccCCCCcceEEEEcCCC
Confidence 999999999987 46788899999999986
No 4
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=206.74 Aligned_cols=82 Identities=30% Similarity=0.573 Sum_probs=75.4
Q ss_pred ceeEEeeCCCeEEEE-EEEEEeeeCCCCCCeEEEEEecCCCCCceeeecchhhhhhhcCCCCCCC--cccCCCccccccc
Q psy17215 2 HFCEGQSYGKKFELT-YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTD 78 (174)
Q Consensus 2 ~v~ltldL~~~f~v~-~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qyfa~~C~~~Fg~~~~~~--~~~~~~~~~~C~p 78 (174)
+|||||||+++|||+ ||+|+|+ ||||++|+||||+|+|++|+||||||.||.++|||+++.. +...++++++|++
T Consensus 131 ~V~itLdL~~~f~~t~~i~l~F~--spRP~am~ierS~D~G~tW~p~qYfA~dC~~~Fg~~~~~~~~~~~~~~~~viCt~ 208 (426)
T 3zyj_B 131 QVNITLSWSKTIELTDNIVITFE--SGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTE 208 (426)
T ss_dssp CEEEEEEEEEEEEECSCEEEEES--SCCCSEEEEEEESSTTSSCEEEEEEESSHHHHTSCCCCCGGGCCSSCSSCCCEEC
T ss_pred ceeEEEcCCCcEEEEEEEEeecC--CCCCCeEEEEeccCCCCCceehHHHhhhhHHhcCCCcccccccCCCCCCcceeCC
Confidence 699999999999999 7999999 9999999999999999999999999999999999998753 4456789999999
Q ss_pred cccccCC
Q psy17215 79 RHKKQGK 85 (174)
Q Consensus 79 ~~s~la~ 85 (174)
+|+++..
T Consensus 209 ~yS~~~P 215 (426)
T 3zyj_B 209 EYSTGYT 215 (426)
T ss_dssp TTTCSSS
T ss_pred CCCCCCC
Confidence 9998754
No 5
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.93 E-value=2.5e-26 Score=203.61 Aligned_cols=79 Identities=27% Similarity=0.601 Sum_probs=73.7
Q ss_pred ceeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeeecchh---hhhhhcCCCCCCCcccCCCccccccc
Q psy17215 2 HFCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVISRGNEQEALCTD 78 (174)
Q Consensus 2 ~v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qyfa~---~C~~~Fg~~~~~~~~~~~~~~~~C~p 78 (174)
+|||||||+++|||+||+|+|+ +||||++|+||||+|+|++|+||||||. ||.++|||+++..+ .+.++++|++
T Consensus 107 ~V~itLdL~~~f~~t~v~l~F~-~spRP~~m~ierS~D~G~tW~p~qyfa~~~~dC~~~fg~~~~~~~--~~~~~viCt~ 183 (403)
T 2y38_A 107 EVNVTLDLGQVFHVAYVLIKFA-NSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERI--TQDDDVICTT 183 (403)
T ss_dssp CCEEEEEEEEEEEEEEEEEEEC-SSCCCSEEEEEEESSSSSSEEEEEEECSSHHHHHHHTCTTTTSCC--CSTTCCCEEC
T ss_pred cceeEEeCCCcEEEEEEEEEec-CCCCCCeEEEEeccCCCCCccceecccCCccchhhhcCCCCCCCC--CCCCceeeec
Confidence 6999999999999999999997 6999999999999999999999999997 99999999988776 4467999999
Q ss_pred ccccc
Q psy17215 79 RHKKQ 83 (174)
Q Consensus 79 ~~s~l 83 (174)
+|+++
T Consensus 184 ~ys~~ 188 (403)
T 2y38_A 184 EYSRI 188 (403)
T ss_dssp STTCS
T ss_pred cCCCC
Confidence 99976
No 6
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.93 E-value=5.3e-26 Score=200.02 Aligned_cols=81 Identities=37% Similarity=0.740 Sum_probs=76.2
Q ss_pred ceeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeeecchhhhhhhcCCCCCCCcc-cCCCccccccccc
Q psy17215 2 HFCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS-RGNEQEALCTDRH 80 (174)
Q Consensus 2 ~v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qyfa~~C~~~Fg~~~~~~~~-~~~~~~~~C~p~~ 80 (174)
+|||||||+++|||+||+|+|+ ++||++|+||||+|+|++|+||||||.+|.+.|+|++++.+. ..++++++|+.+|
T Consensus 101 ~VtitLdL~~~f~~t~v~i~F~--~~rP~~m~Iers~d~G~tw~p~qyfa~~C~~~f~~~~~~~~~~~~~~~~viCt~~y 178 (375)
T 4aqt_A 101 SINLTLHLGKAFDITYVRLKFH--TSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEF 178 (375)
T ss_dssp CEEEEEEEEEEEEEEEEEEEES--SSCCSEEEEEEESSSSSCCEEEEEEETTHHHHHSCCTTCCCCTTSCTTCCEEESTT
T ss_pred ceEEEEcCCCeEEEEEEEEEec--CCCCCcEEEEEecCCCCCccceeeeecchhHhcCCCCCCCcCCCCCCCeeEeCCcC
Confidence 6999999999999999999999 999999999999999999999999999999999999988764 4778999999999
Q ss_pred cccC
Q psy17215 81 KKQG 84 (174)
Q Consensus 81 s~la 84 (174)
+++.
T Consensus 179 s~~~ 182 (375)
T 4aqt_A 179 SDIS 182 (375)
T ss_dssp CSCC
T ss_pred CCCc
Confidence 9874
No 7
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=99.88 E-value=1.1e-23 Score=182.91 Aligned_cols=90 Identities=29% Similarity=0.481 Sum_probs=80.8
Q ss_pred CccccccccccccCCCcccccccccceeeE---eccccCCCCceeeeccC--cc-cccCCCCCCCCCCCccccccCCCCC
Q psy17215 71 EQEALCTDRHKKQGKGKMSRRRTNCQEVKV---NSVCGLESPERYCDTSG--AC-HVCDAGSPRGRFPAEYLTDLNNPSN 144 (174)
Q Consensus 71 ~~~~~C~p~~s~la~g~~~~~~~~~~~v~a---ssTCG~~~pe~~C~~~~--~C-~~Cd~~~p~~~Hp~~~ltD~~~~~~ 144 (174)
.+...|.|++.|||.|+ .+.+ ++|||. +||+||.+.+ .| ++||+++|+++||+++|||.++.++
T Consensus 17 ~~~~~C~P~~~nla~~~---------~~~~~~~~sTCG~-~pe~yC~~~~~~~C~~~CDa~~p~~aHP~~~ltD~~~~~~ 86 (338)
T 3tbd_A 17 WEFYACQPKVMRLKDYV---------KVKVEPSGITCGD-PPERFCSHENPYLCSNECDASNPDLAHPPRLMFDKEEEGL 86 (338)
T ss_dssp EEECCBCCCCEEGGGGC---------EEEEESTTCBSCS-SCEEECCSSCCSSCCEEECTTSTTTCCCGGGGSSCCCTTC
T ss_pred ccccccCCCccchhcCe---------eEEeccCCCCcCc-ChhhheecCCcccccccccCCCccccCCHHHhccCCCCCC
Confidence 45678999999999999 8887 799995 8999999875 57 6999999999999999999999999
Q ss_pred ceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 145 VTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 145 ~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.|||||+++. +.+.|.+|||||||||
T Consensus 87 ~TwWQS~~~~----~~~~p~~VnlTL~L~k 112 (338)
T 3tbd_A 87 ATYWQSITWS----RYPSPLEANITLSWNK 112 (338)
T ss_dssp CCCEEBCCST----TTTSCCCEEEEEEEEE
T ss_pred CceeccCccc----CCCCCccceEEEcCCC
Confidence 9999999986 3456789999999986
No 8
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.88 E-value=2.3e-23 Score=185.65 Aligned_cols=90 Identities=29% Similarity=0.519 Sum_probs=76.7
Q ss_pred CccccccccccccCCCcccccccccceee---EeccccCCCCceeeeccC--cc-cccCCCCCCCCCCCccccccCCCCC
Q psy17215 71 EQEALCTDRHKKQGKGKMSRRRTNCQEVK---VNSVCGLESPERYCDTSG--AC-HVCDAGSPRGRFPAEYLTDLNNPSN 144 (174)
Q Consensus 71 ~~~~~C~p~~s~la~g~~~~~~~~~~~v~---assTCG~~~pe~~C~~~~--~C-~~Cd~~~p~~~Hp~~~ltD~~~~~~ 144 (174)
.+...|.|++.|+|+|+ +|. |+|||| ++||+||++.. +| ++||+++|+++||+++|||.++.++
T Consensus 45 ~~~~~C~P~~~n~a~~~---------~v~~~~assTCG-~~pe~yC~~~~~~~C~~~Cda~~p~~aHp~~~~tD~~~~~~ 114 (426)
T 3zyj_B 45 WDYMACQPESTDMTKYL---------KVKLDPPDITCG-DPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHP 114 (426)
T ss_dssp EEEBCCCCCCEEGGGTC---------EEEEESGGGBSC-SSCEECCCSSCTTCCCCEECSSSTTTCCCGGGGGSCC----
T ss_pred CcCccCCCcHHhHhcCC---------eeeeeccCcccC-CCccceeeccCCCcccCcccCCCccccCCHHHeecCCCCCC
Confidence 34588999999999999 777 599999 58999999864 89 9999999999999999999999999
Q ss_pred ceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 145 VTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 145 ~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.|||||+++. ..+.|++|||||||||
T Consensus 115 ~twWQS~~~~----~~~~p~~V~itLdL~~ 140 (426)
T 3zyj_B 115 STFWQSATWK----EYPKPLQVNITLSWSK 140 (426)
T ss_dssp CCCEEBCCCC----SCSSCCCEEEEEEEEE
T ss_pred CceecCCccc----CCCCccceeEEEcCCC
Confidence 9999999986 3456689999999986
No 9
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.87 E-value=3.7e-23 Score=183.36 Aligned_cols=88 Identities=20% Similarity=0.404 Sum_probs=52.3
Q ss_pred CCccccccccccccCCCcccccccccceeeEeccccCCCC---------ceeeecc---------------CcccccCCC
Q psy17215 70 NEQEALCTDRHKKQGKGKMSRRRTNCQEVKVNSVCGLESP---------ERYCDTS---------------GACHVCDAG 125 (174)
Q Consensus 70 ~~~~~~C~p~~s~la~g~~~~~~~~~~~v~assTCG~~~p---------e~~C~~~---------------~~C~~Cd~~ 125 (174)
......|+|.+.|+|+|+ +|.|+||||+++| |+||++. .+|++||++
T Consensus 5 ~~~~~~c~P~~~Nla~~~---------~i~assTCG~~~~~~~~~~p~~e~yC~~~~~~~~~~~~~~~~~~~~C~~Cda~ 75 (403)
T 2y38_A 5 GGDGFSLHPPYFNLAEGA---------RITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAA 75 (403)
T ss_dssp ---CCCBCCCCEETTTTC---------EEEESSCC---------------------------------------------
T ss_pred cccCCccCCcccccccCC---------eeEEEeCCCCCCCCccccCCcccccceeccCCcccccccccccCCccCccCCC
Confidence 356889999999999999 9999999999776 9999873 269999999
Q ss_pred CCCCCCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 126 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 126 ~p~~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
+|.++||+++||| ++.|||||+++.. +.+ +++|||||||||
T Consensus 76 ~p~~~Hp~~~~~D----~~~twWQS~~~~~---g~~-~~~V~itLdL~~ 116 (403)
T 2y38_A 76 NSNKAHPVSNAID----GTERWWQSPPLSR---GLE-YNEVNVTLDLGQ 116 (403)
T ss_dssp -----CCGGGTTS----SSSCCEECCCSTT---CSS-TTCCEEEEEEEE
T ss_pred CccccCcHHHhcc----CCceeeccCCccC---CCc-cccceeEEeCCC
Confidence 9999999999999 4579999999862 333 379999999986
No 10
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.85 E-value=2.4e-22 Score=181.66 Aligned_cols=90 Identities=31% Similarity=0.516 Sum_probs=75.8
Q ss_pred CCCccccccccccccCCCcccccccccceeeEeccccCCCCceeeeccC-----cccccCCCCC--CCCCCCccccccC-
Q psy17215 69 GNEQEALCTDRHKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSG-----ACHVCDAGSP--RGRFPAEYLTDLN- 140 (174)
Q Consensus 69 ~~~~~~~C~p~~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~-----~C~~Cd~~~p--~~~Hp~~~ltD~~- 140 (174)
....+..|+|++.|||+||.. +|.|+||||+++||+||+++. +|++||+++| .++||+++|+|..
T Consensus 11 ~~~~~~~c~p~~~n~~~~~~~-------~~~~~~tCG~~~~e~~c~~~~~~~~~~c~~Cd~~~p~~~~~hp~~~~~~~~~ 83 (525)
T 4aqs_A 11 YGCAEGSCYPATGDLLIGRAQ-------KLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSRDPYHETLNPDSHLIENVV 83 (525)
T ss_dssp -CGGGSCBCCCCEESSTTCGG-------GEECSCCTTSSSCEEEEEECSSSSCEEEEEECCSSCCBTTTBTTCCCGGGSS
T ss_pred cCCCCCCcCCCchhhhcCCCC-------cEEEecCCCCCCCcceeccCCCCCCCcCCcCcCCCCcccccCChhhcccccc
Confidence 446788999999999999933 799999999999999998763 7999999998 5789999998743
Q ss_pred ----CCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 141 ----NPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 141 ----~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
..+..|||||+++. ++|||||||+|
T Consensus 84 ~~~~~~~~~~wwqs~~~~---------~~v~itl~l~~ 112 (525)
T 4aqs_A 84 TTFAPNRLKIWWQSENGV---------ENVTIQLDLEA 112 (525)
T ss_dssp CC-----CCCCEECCTTC---------CCCEEEEEEEE
T ss_pred ccccCCCCcccccCCCCC---------cCeEEEEcCCC
Confidence 34567999999874 79999999986
No 11
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=96.13 E-value=0.0084 Score=43.66 Aligned_cols=44 Identities=25% Similarity=0.378 Sum_probs=37.8
Q ss_pred eEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeee
Q psy17215 4 CEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~q 48 (174)
-|+|||++.+.|..|.|++.....+|..+.|+-|.| |.+|.++.
T Consensus 45 ~l~vDLg~~~~v~~v~i~~~~~~~~~~~~~i~~S~D-g~~w~~~~ 88 (145)
T 2jda_A 45 WVQLELDKEQSIENILIVPFKPTERKLKFSIFYSND-GKNWQPLA 88 (145)
T ss_dssp EEEEEEEEEEEEEEEEEEESSTTTCCEEEEEEEESS-SSSCEEEE
T ss_pred eEEEECCCceEEEEEEEEeccCCCceEEEEEEEeCC-CCceEEee
Confidence 589999999999999999972234899999999988 88999875
No 12
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=95.80 E-value=0.0052 Score=47.31 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=37.8
Q ss_pred cccccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCCCCCccccccCCCCCceeecCCCCCCC
Q psy17215 77 TDRHKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSV 156 (174)
Q Consensus 77 ~p~~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~Hp~~~ltD~~~~~~~TwWQS~~~~~~ 156 (174)
.+.+.|||.|+ ++.|+|+-+ .+++++++|- +..|+|.|....
T Consensus 23 ~~~~~NLA~~k---------~ataSs~~~------------------------~~~a~~AvDG---n~~T~W~s~~~~-- 64 (161)
T 4a3z_A 23 SANYVNIAENK---------NVSGSNSQS------------------------GNPLSNITDG---DLSSLWISDNGA-- 64 (161)
T ss_dssp ---CCBTTTTC---------CEEESCBCT------------------------TCCGGGGSSS---CTTCCEEBGGGC--
T ss_pred CCCcccccCCC---------ceEEeCCcC------------------------CCChhhcCcC---CCCCeEEcCCCC--
Confidence 45678999999 888887654 2678899994 456999987542
Q ss_pred CCCCCCCCeeEEEEeCCC
Q psy17215 157 NSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 157 ~~~~~~p~~VtltLdLgk 174 (174)
..--|+||||+
T Consensus 65 -------~~~Wi~VDLg~ 75 (161)
T 4a3z_A 65 -------MPANATIDLEG 75 (161)
T ss_dssp -------SSEEEEEEEEE
T ss_pred -------CCeEEEEECCC
Confidence 35678888874
No 13
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=95.21 E-value=0.026 Score=43.30 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=36.7
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~q 48 (174)
--|+||||+.+.|..|.|.|. ...+.....||-|.| |.+|+..-
T Consensus 67 ~Wi~VDLg~~~~v~~v~i~~~-~~~~~~~y~IevS~D-g~~W~~v~ 110 (161)
T 4a3z_A 67 ANATIDLEGNNFVDFLELHFE-KEGFRFQFKVEVEDE-SGNRETVL 110 (161)
T ss_dssp EEEEEEEEEEEEEEEEEEECS-STTCCEEEEEEEECT-TCCEEEEE
T ss_pred eEEEEECCCcEEEeEEEEEEC-CCCceEEEEEEEEcC-CCCEEEEE
Confidence 358999999999999999998 233567899999977 88998763
No 14
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=95.02 E-value=0.057 Score=40.33 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=37.9
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~p~q 48 (174)
.-|+|||++.+.|..|.+..... ..+|..+.|+-|.| |.+|+.+.
T Consensus 55 ~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~S~D-g~~W~~v~ 101 (159)
T 3f2z_A 55 YEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEASED-GTNWESIG 101 (159)
T ss_dssp EEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESS-SSSCEEEE
T ss_pred EEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEEEcC-CCCeEEeE
Confidence 46999999999999999987621 35899999999988 89999865
No 15
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=94.62 E-value=0.036 Score=41.62 Aligned_cols=40 Identities=20% Similarity=0.289 Sum_probs=35.5
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPL 47 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~ 47 (174)
++|||++.+.|..|.+++. ...+....|+-|.| |.+|+.+
T Consensus 65 ~~VDLg~~~~V~~v~i~~~--r~~v~~y~I~~S~D-G~~W~~~ 104 (149)
T 4a42_A 65 VTFDLSKEKDISAIDIVSK--GNSPLKYSIEISND-GTEWTKI 104 (149)
T ss_dssp EEEEEEEEEECCEEEEEEC--SSSCCCEEEEEESS-SSSCEEE
T ss_pred EEEECCCcEEEEEEEEEcC--CCCcEEEEEEEEcC-CCeEeEe
Confidence 5899999999999999877 56688999999988 8999885
No 16
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=94.22 E-value=0.11 Score=39.43 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=37.9
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~p~q 48 (174)
.-|+|||++.+.|..|.+..... ..+|..+-|+-|.| |.+|+.+.
T Consensus 65 ~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~S~D-g~~W~~v~ 111 (169)
T 3ggl_A 65 YDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASED-NVNWTPIG 111 (169)
T ss_dssp EEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESS-SSCCEEEE
T ss_pred EEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEEeCC-CCCcEEeE
Confidence 46999999999999999877621 36899999999988 89999865
No 17
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=94.04 E-value=0.088 Score=41.40 Aligned_cols=46 Identities=26% Similarity=0.266 Sum_probs=37.3
Q ss_pred eEEeeCCCeEEEEEE-EEEeeeC---CCCCCeEEEEEecCCCCCceeeecc
Q psy17215 4 CEGQSYGKKFELTYI-SLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 4 ~ltldL~~~f~v~~v-~l~f~~~---sprP~s~~iekS~d~G~~W~p~qyf 50 (174)
-|+|||++...|+.| +++..+. .....+..|+-|.| |.+|.+|.-.
T Consensus 67 wLQVDLg~~~~VtgV~~tQG~~~~~~~~~vt~Y~l~yS~D-G~~W~~~~~~ 116 (192)
T 2w1s_A 67 FIGLDLGKEIKLDGIRFVIGKNGGGSSDKWNKFKLEYSLD-NESWTTIKEY 116 (192)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSSTTTTCCCSEEEEEEESS-SSSCEEEEEE
T ss_pred eEEEECCCeEEEEEEEEEcCCCCCCCCCeEEEEEEEEEcC-CCCeEEEecC
Confidence 389999999999999 7776533 24667899999998 8999998754
No 18
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=94.01 E-value=0.074 Score=40.17 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=36.9
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~p~q 48 (174)
.-|+|||++.+.|..|.++.... ..+|..+-|+-|.| |.+|+.+.
T Consensus 71 ~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~S~D-G~~W~~v~ 117 (161)
T 4a41_A 71 QSITLELGGSYEINKFTYLPRSGAKNGNITKYELHVSED-GNNFRKIS 117 (161)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEESS-SSCEEEEE
T ss_pred EEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEEECC-CCceEEee
Confidence 56999999999999999876511 35788899999987 89999864
No 19
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=94.00 E-value=0.053 Score=39.13 Aligned_cols=44 Identities=9% Similarity=0.123 Sum_probs=36.4
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCceee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQPL 47 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~p~ 47 (174)
.-|+|||++.+.|..|.+++... ..+|..+.|+-|.| |.+|...
T Consensus 53 ~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~D-g~~w~~v 98 (150)
T 2j1a_A 53 HHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLD-GENFTEV 98 (150)
T ss_dssp CEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESS-SSSEEEE
T ss_pred eEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEEEEcC-CCceEEE
Confidence 46999999999999999987621 34678999999987 8899974
No 20
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=92.86 E-value=0.17 Score=39.25 Aligned_cols=43 Identities=14% Similarity=0.042 Sum_probs=35.7
Q ss_pred EEeeCCCeEEEEEEEEEeeeC----CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK----SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~----sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+-|.++..+. ..-..+..|+-|.| |.+|.+|.
T Consensus 75 LQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y~l~yS~D-g~~W~~y~ 121 (178)
T 2wuh_A 75 LQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRD-GTRWISWR 121 (178)
T ss_dssp EEEEEEEEEEEEEEEEECCCGGGTCCCCCSEEEEEEESS-SSSCEECC
T ss_pred EEEecCCceEEeEEEEecccCCCCccceeEEEEEEEEcC-CCcEEEEe
Confidence 899999999999999998622 13457789999999 79999876
No 21
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=92.58 E-value=0.082 Score=40.08 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=34.1
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+. .....+..|+-|.| |.+|.+|.
T Consensus 59 LqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y~l~yS~D-g~~W~~~~ 104 (160)
T 1czt_A 59 LEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQ-GVEWKPYR 104 (160)
T ss_dssp EEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECC
T ss_pred EEEeCCCcEEEEEEEEeCcCCCCcccEEEEEEEEEECC-CCcEEEEE
Confidence 899999999999999998621 12335677899988 89999875
No 22
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=92.36 E-value=0.091 Score=39.61 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=34.5
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC---CCCCeEEEEEecCCCCCceeeec
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS---IKPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s---prP~s~~iekS~d~G~~W~p~qy 49 (174)
|+|||++...|+.|.++..+.. ....+..|+-|.| |.+|.+|.-
T Consensus 60 lqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~~S~D-g~~W~~~~~ 106 (158)
T 3bn6_A 60 LQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDD-GVTWTEYKD 106 (158)
T ss_dssp EEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECCC
T ss_pred EEEeCCCceEEEEEEeeCCCCCCCCceEEEEEEEEECC-CCceEEEEc
Confidence 8999999999999999876211 1345677899988 899998753
No 23
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=92.22 E-value=0.2 Score=38.78 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=39.0
Q ss_pred ceeEEeeCCCeEEEEEEEEEeeeCC------CCCCeEEEEEecCCCCCceeeecc
Q psy17215 2 HFCEGQSYGKKFELTYISLSFCPKS------IKPDSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 2 ~v~ltldL~~~f~v~~v~l~f~~~s------prP~s~~iekS~d~G~~W~p~qyf 50 (174)
.-.|+|||++...|..+.+...... ..|..+-||-|.| |.+|+..--+
T Consensus 64 P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S~D-g~~W~~v~~~ 117 (172)
T 3hnm_A 64 PYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEASID-NENWVKLKDW 117 (172)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEESS-SSCEEEEECC
T ss_pred CEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEEeC-CCCeEEeEEE
Confidence 3469999999999999988776332 4788999999999 7899987644
No 24
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=91.97 E-value=0.12 Score=42.59 Aligned_cols=36 Identities=11% Similarity=-0.020 Sum_probs=25.8
Q ss_pred EEeeCCCeEEEEEEEEEeeeC----CCCCCeEEEEEecCC
Q psy17215 5 EGQSYGKKFELTYISLSFCPK----SIKPDSLAIYKSQDF 40 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~----sprP~s~~iekS~d~ 40 (174)
++||||+.+.|..|+|.+... ...+..+-|+-|.|.
T Consensus 53 ~~VDLg~~~~v~~V~i~~r~d~~~~~~~~~~i~v~~s~d~ 92 (293)
T 3cqo_A 53 WRVDLLEPYIVTSITITNRGDCCPERLNGVEIHIGNSLQE 92 (293)
T ss_dssp EEEEEEEEEEEEEEEEECCSSSCGGGGTTEEEEEESCCGG
T ss_pred EEEECCCceEEEEEEEEeCCCCccccccCeEEEEecCCcc
Confidence 789999999999999996410 224455666667663
No 25
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=91.93 E-value=0.098 Score=46.82 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=25.0
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.+.+++++|. +..|+|.++... ..-.|+||||+
T Consensus 342 ~~~~~~a~Dg---d~~TyW~a~~~~---------~~~wl~vDLg~ 374 (469)
T 3eyp_A 342 KYSPEKMLDN---EKNTYFAGKDGE---------VKADIIFTLPK 374 (469)
T ss_dssp GGCGGGGGSC---CSSCCEECCTTC---------CCEEEEEEEEE
T ss_pred CCChhhcccC---CCCceEeCCCCC---------CCcEEEEECCC
Confidence 3788999994 557999998653 34688898874
No 26
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=91.47 E-value=0.11 Score=38.67 Aligned_cols=22 Identities=32% Similarity=0.572 Sum_probs=17.5
Q ss_pred CCCCCccccccCCCCCceeecCCCC
Q psy17215 129 GRFPAEYLTDLNNPSNVTCWRSEAQ 153 (174)
Q Consensus 129 ~~Hp~~~ltD~~~~~~~TwWQS~~~ 153 (174)
..|++++|.|. +..|||.|..+
T Consensus 25 ~~~~~~~~iDg---~~~T~W~s~g~ 46 (139)
T 2yc2_A 25 ERFPPENMLDG---KDNTFWVTTGM 46 (139)
T ss_dssp TTSCGGGGGSS---CTTCCEECCSS
T ss_pred CCCChhheECC---CCCCEEeCCCC
Confidence 47999999994 46799999643
No 27
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=91.18 E-value=0.29 Score=36.33 Aligned_cols=41 Identities=10% Similarity=-0.045 Sum_probs=35.8
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCC-CCCceee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDF-GKSWQPL 47 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~-G~~W~p~ 47 (174)
-.|+|+|++...|.-|.|++. ++....||.|.|. .+.|+.+
T Consensus 49 q~i~I~~~~~~~is~~~i~~~----~~k~~~ie~s~~~~p~~w~~i 90 (139)
T 2yc2_A 49 QEFVLRLESCIRVSKITTLSL----NVRKLAVEKCDQDKPDQFEKV 90 (139)
T ss_dssp EEEEEEEEEEEEEEEEEEEEE----SEEEEEEEEECSSSCCCCEEE
T ss_pred eEEEEECCCceEEEEEEEEec----CCcEEEEEEecCCCCCceEEE
Confidence 358999999999999999998 5999999999883 1789886
No 28
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=91.12 E-value=0.16 Score=38.03 Aligned_cols=55 Identities=18% Similarity=0.073 Sum_probs=35.3
Q ss_pred ccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCCCCCccccccCCCCCceeecCCCCCCCCCC
Q psy17215 80 HKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 159 (174)
Q Consensus 80 ~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~ 159 (174)
..|||.|+ ++.+||+.+. +++++++|- +..|.|.+..-. .
T Consensus 9 ~~NlA~~k---------~ataSS~~~~------------------------~~a~~AvDG---~~~t~W~~~~ct----~ 48 (153)
T 3lei_A 9 TENIARGK---------QASQSSTAYG------------------------GAATRAVDG---NVDSDYGHHSVT----H 48 (153)
T ss_dssp SCCTTTTC---------EEEESCCCTT------------------------CCGGGGGSS---CCCCCGGGTCSC----C
T ss_pred CcccCCCC---------CeeECCCcCC------------------------CCccccccC---CCCCccccCccc----c
Confidence 46999999 8999988751 567788884 345788763211 0
Q ss_pred CCCCCeeEEEEeCCC
Q psy17215 160 SASPDNVTLTLSLEK 174 (174)
Q Consensus 160 ~~~p~~VtltLdLgk 174 (174)
.....+--|+||||+
T Consensus 49 t~~~~~~W~~VDLg~ 63 (153)
T 3lei_A 49 TNFEDNAWWQVDLGK 63 (153)
T ss_dssp CCSBTTCEEEEEEEE
T ss_pred CCCCCCCeEEEECCC
Confidence 001135668888874
No 29
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=91.00 E-value=0.36 Score=40.28 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=35.7
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+. .....+..|+-|.| |.+|.+|.
T Consensus 217 LqVDLg~~~~Vt~V~tqg~~~~~~~~~v~~Y~l~~S~d-g~~W~~~~ 262 (318)
T 2qqi_A 217 LQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNN-GSDWKMIM 262 (318)
T ss_dssp EEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEEEEESS-SSSCEECB
T ss_pred EEEeCCCceEEEEEEEcCccCCCCCeEEEEEEEEEECC-CCCEEEEE
Confidence 899999999999999998732 13457888999988 89999865
No 30
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=90.79 E-value=0.15 Score=38.88 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=17.5
Q ss_pred CCCCCccccccCCCCCceeecCCCC
Q psy17215 129 GRFPAEYLTDLNNPSNVTCWRSEAQ 153 (174)
Q Consensus 129 ~~Hp~~~ltD~~~~~~~TwWQS~~~ 153 (174)
..|++++|+|. +..|+|.|..+
T Consensus 33 ~~~~~~~~iDg---n~~T~W~t~g~ 54 (153)
T 1tvg_A 33 EKHPPENIIDG---NPETFWTTTGM 54 (153)
T ss_dssp TTSCGGGGGSS---CTTCCEECCSC
T ss_pred cccCHHHcCcC---CCCceEECCCC
Confidence 57999999994 55799999643
No 31
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=90.21 E-value=0.38 Score=36.66 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=35.5
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCC--Cceee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGK--SWQPL 47 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~--~W~p~ 47 (174)
-.|+|+|++...|.-|.|++. ++....||.|.| |+ .|+..
T Consensus 57 q~i~Idf~k~~~is~~~i~~~----~vk~~~ie~s~d-~~p~~w~~i 98 (153)
T 1tvg_A 57 QEFIICFHKHVRIERLVIQSY----FVQTLKIEKSTS-KEPVDFEQW 98 (153)
T ss_dssp EEEEEEEEEEEEEEEEEEEEE----SEEEEEEEEECS-SSSCCCEEE
T ss_pred cEEEEECCCceEEEEEEEEec----CCEEEEEEEECC-CCCcceEEe
Confidence 358999999999999999999 589999999987 65 89886
No 32
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=87.91 E-value=0.39 Score=36.33 Aligned_cols=43 Identities=19% Similarity=0.250 Sum_probs=32.3
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC---CCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS---IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s---prP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++-.... .--.+..|+-|.| |.+|..|.
T Consensus 61 LqVDLg~~~~VtgV~tqG~~~~~~~~~v~~y~l~yS~D-g~~W~~~~ 106 (159)
T 3hny_M 61 LQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQD-GHQWTLFF 106 (159)
T ss_dssp EEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECE
T ss_pred EEcccCCcEEEEEEEeecCCCCCccceEEEEEEEEEEC-CCcEEEEe
Confidence 8999999999999999865111 1124566888887 89999875
No 33
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=87.78 E-value=0.41 Score=36.12 Aligned_cols=55 Identities=18% Similarity=0.110 Sum_probs=34.6
Q ss_pred ccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCCCCCccccccCCCCCceeecCCCCCCCCCC
Q psy17215 80 HKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 159 (174)
Q Consensus 80 ~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~ 159 (174)
..|||.|+ ++.+||+.+ .+++++++|. +..|.|.+..-. .
T Consensus 9 ~~NlA~~k---------~ataSS~~~------------------------~~~a~~AvDG---~~~t~w~~~sct----~ 48 (153)
T 4gwi_A 9 TENIARGK---------QASQSSTAH------------------------GGAATRAVDG---NVDSDYGHHSVT----H 48 (153)
T ss_dssp SCCTTTTC---------EEEESCCCT------------------------TCCGGGGGSS---CCCCCGGGTCCC----C
T ss_pred ccccCCCC---------ceEEcCCCC------------------------CCCcceeEcC---CCCCcccccccc----c
Confidence 35999999 888888754 2577788884 345788763210 0
Q ss_pred CCCCCeeEEEEeCCC
Q psy17215 160 SASPDNVTLTLSLEK 174 (174)
Q Consensus 160 ~~~p~~VtltLdLgk 174 (174)
.....+.-|+||||+
T Consensus 49 t~~~~~~W~~VDLg~ 63 (153)
T 4gwi_A 49 TNFEDNAWWQVDLGK 63 (153)
T ss_dssp CCSBTTCEEEEEEEE
T ss_pred CCCCCCCEEEEECCC
Confidence 001134568888874
No 34
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=87.31 E-value=0.53 Score=39.27 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=34.0
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC-----CCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS-----IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s-----prP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..... ..-.+..|+-|.| |.+|..|.
T Consensus 58 lqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i~~S~D-g~~W~~~~ 105 (318)
T 2qqi_A 58 IQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 105 (318)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred EEEccCCcEEEEeeeeeccccCCCCccEeEEEEEEEEecC-CCeEEEEe
Confidence 8999999999999999976222 1235577888988 89999874
No 35
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=87.23 E-value=0.48 Score=39.57 Aligned_cols=43 Identities=16% Similarity=0.058 Sum_probs=33.8
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC-----CCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS-----IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s-----prP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++....+ ..-.+..|+-|.| |.+|..|.
T Consensus 59 lqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 106 (325)
T 2qqj_A 59 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTN-GEDWMVYR 106 (325)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred EEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEEEEcC-CcEeEEee
Confidence 8999999999999999986211 1224577888988 89999875
No 36
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=86.88 E-value=0.74 Score=37.62 Aligned_cols=43 Identities=12% Similarity=-0.033 Sum_probs=34.2
Q ss_pred EEeeCCCeEEEEEEEEEeeeC-CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK-SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~-sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+. ..--.+..|+-|.| |.+|.+|.
T Consensus 63 LqVDLg~~~~Vt~V~tQG~~~~~~~vt~Y~l~yS~D-g~~W~~y~ 106 (257)
T 2vm9_A 63 IVAGSDSVKHFVAISTQGRGDHDQWVTSYKLRYTLD-NVNWVEYN 106 (257)
T ss_dssp EEEEEEEEEEEEEEEEECCSSSSCEEEEEEEEEESS-SSCEEEGG
T ss_pred EeecCCCcEEEEEEEEeCCccCCceEEEEEEEEEcC-CCcEEEEc
Confidence 899999999999999998721 12235677888988 88999865
No 37
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=86.61 E-value=0.84 Score=36.65 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=32.7
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCCC-----CCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSIK-----PDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~spr-----P~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|+++-...+.. -.+..|+-|.| |.+|..|.
T Consensus 57 LQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~yS~D-G~~W~~y~ 104 (218)
T 4deq_A 57 IQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 104 (218)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred EEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEEEEeC-CCceEEee
Confidence 899999999999999987622211 13456788887 89999875
No 38
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=85.32 E-value=1.4 Score=39.26 Aligned_cols=45 Identities=16% Similarity=0.335 Sum_probs=36.8
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCce-eee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQ-PLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~-p~q 48 (174)
..|+|||++.+.|..|.+..... ..++..+-||-|.| |.+|+ |+.
T Consensus 506 ~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~S~D-g~~w~~~v~ 553 (601)
T 1w8o_A 506 HRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSLN-GTTWDGPVA 553 (601)
T ss_dssp EEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEESS-SSSCEEEEE
T ss_pred eEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEEECC-CCccceeee
Confidence 46999999999999999976411 34889999999988 88999 454
No 39
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=85.21 E-value=1.5 Score=32.55 Aligned_cols=42 Identities=7% Similarity=0.032 Sum_probs=31.7
Q ss_pred eEEeeCCCeEEEEEEEEEeeeCC----CCCCeEEEEEecCCCCCcee
Q psy17215 4 CEGQSYGKKFELTYISLSFCPKS----IKPDSLAIYKSQDFGKSWQP 46 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~~s----prP~s~~iekS~d~G~~W~p 46 (174)
-|+||||+.+.|..|.| +.+.. .|-..+-|+-+.++|.+|..
T Consensus 56 W~~VDLg~~~~v~~V~i-~~~~d~~~~~r~~~~~I~vs~~dg~~w~~ 101 (153)
T 3lei_A 56 WWQVDLGKTENVGKVKL-YNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp EEEEEEEEEEEEEEEEE-EECCSTTCGGGSCSEEEEEECTTCCEEEE
T ss_pred eEEEECCCceEEeEEEE-EeCCCCcccccceeEEEEEECCCCCcccc
Confidence 48999999999999999 65111 24456888888766888875
No 40
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=84.77 E-value=0.55 Score=35.25 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=25.3
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.+++++++|. +..|+|.|.... .......|+||||+
T Consensus 44 ~~~~~~a~DG---~~~T~W~s~~~~------~~~~p~~i~iDLg~ 79 (161)
T 4a41_A 44 EGLAKFAIDG---KENTIWHTKYNP------VEELPQSITLELGG 79 (161)
T ss_dssp CCCGGGGGSS---CTTCCEECCTTT------TCCSCEEEEEEEEE
T ss_pred CCcHHHcCcC---CCCCeEEeCCCC------CCCCCEEEEEEcCC
Confidence 4899999995 346899996431 11245789999875
No 41
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=84.55 E-value=1.1 Score=37.47 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=35.2
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---------CCCCCeEEEEEecCCCCCceeeecc
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---------SIKPDSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---------sprP~s~~iekS~d~G~~W~p~qyf 50 (174)
|+|||++...|+.|+++..+. ..--.+..|+-|.| |.+|..|.--
T Consensus 218 LqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~vt~Y~l~yS~d-g~~W~~~~~~ 271 (325)
T 2qqj_A 218 LQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-GKDWEYIQDP 271 (325)
T ss_dssp EEEEEEEEEEEEEEEEECBCCC----CCCCCBCEEEEEEEEESS-SSSCEECEET
T ss_pred eEeccCCceeEEEEEecCCCCCCCccccCcceeEEEEEEEEEeC-CCCeEEEecC
Confidence 899999999999999998721 12235678888888 8999987643
No 42
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=84.14 E-value=0.65 Score=44.90 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=36.9
Q ss_pred ccccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCCCCCccccccCCCCCceeecCCCCCCCC
Q psy17215 78 DRHKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVN 157 (174)
Q Consensus 78 p~~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~ 157 (174)
+.-.|||.|+ ++.|||+-+ .|++++++|. +..|+|.|. .
T Consensus 22 ~~~~NLA~gk---------~vTASS~~~------------------------g~~p~nAvDG---n~~T~WsS~-~---- 60 (914)
T 4a4a_A 22 ASGVEITEGV---------TVTAKGNTE------------------------GNTADLAIDG---DLSTYWESS-N---- 60 (914)
T ss_dssp --CCBCCSSC---------EEEESCCCT------------------------TCCGGGGSSS---CTTCCEECC-S----
T ss_pred CccccccCCC---------ceEEeccCC------------------------CCcHHHeECC---CCCCeEecC-C----
Confidence 3456899999 999988753 2888999984 456999997 2
Q ss_pred CCCCCCCeeEEEEeCCC
Q psy17215 158 SLSASPDNVTLTLSLEK 174 (174)
Q Consensus 158 ~~~~~p~~VtltLdLgk 174 (174)
....||||||+
T Consensus 61 ------~~qWLqVDLG~ 71 (914)
T 4a4a_A 61 ------DYKWIEVDLGG 71 (914)
T ss_dssp ------SCCEEEEEEEE
T ss_pred ------CCceEEEECCC
Confidence 23579999974
No 43
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=84.02 E-value=1.1 Score=43.44 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=37.3
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeeec
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~qy 49 (174)
.-|+||||+.+.|+.|.|+-. ..+..+..|+-|.| |.+|+++.-
T Consensus 63 qWLqVDLG~~~~V~~V~l~~~--~~~v~~Y~Ie~S~D-G~~Wt~v~~ 106 (914)
T 4a4a_A 63 KWIEVDLGGIYELSKIEIFNK--DEAVYKYNIYASED-GENFNKIAY 106 (914)
T ss_dssp CEEEEEEEEEEEEEEEEEECS--SSSCEEEEEEEESS-SSCCEEEEE
T ss_pred ceEEEECCCeEEEEEEEEEec--CCceEEEEEEEEcC-CCCeEEEEE
Confidence 358999999999999999754 56678899999998 999998753
No 44
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=83.43 E-value=1.2 Score=38.75 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=34.3
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC---CCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS---IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s---prP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+.. ..-.+..|+-|.| |.+|.+|.
T Consensus 349 LqVDLg~~~~vt~v~tqg~~~~~~~~~v~~Y~i~~S~d-g~~W~~~~ 394 (450)
T 2qqm_A 349 LQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNN-GSDWKMIM 394 (450)
T ss_dssp EEEEEEEEEEEEEEEEECCSCTTTCCCEEEEEEEEESS-SSSCEECB
T ss_pred EEEeCCCcEEEEEEEecCccCCCCcEEEEEEEEEEECC-CCcEEEEE
Confidence 8999999999999999976221 2335678999988 89998865
No 45
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=81.77 E-value=1.5 Score=38.25 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=34.8
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---------CCCCCeEEEEEecCCCCCceeeecc
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---------SIKPDSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---------sprP~s~~iekS~d~G~~W~p~qyf 50 (174)
|+|||++...|+.|+++.... ..--.+..|+-|.| |.+|+.|.--
T Consensus 347 LqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~yS~d-g~~W~~~~~~ 400 (460)
T 2qqo_A 347 LQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-GKDWEYIQDP 400 (460)
T ss_dssp EEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEEEEEEEEESS-SSSCEECEET
T ss_pred EEEcCCCceEEEEEEecCCCCCCCccccccceeEEEEEEEEEeC-CCceEEEECC
Confidence 899999999999999997720 12234677888888 8999997643
No 46
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=81.54 E-value=1.2 Score=32.94 Aligned_cols=38 Identities=21% Similarity=0.231 Sum_probs=25.6
Q ss_pred CCCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 129 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 129 ~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
..+++++|+|. +..|+|.|.... ...+....|+||||+
T Consensus 26 ~~g~~~~a~DG---~~~T~W~s~~~~-----~~~~~p~~i~vDLg~ 63 (159)
T 3f2z_A 26 NNGHAKHLIDG---NIETFWHSRWQG-----GSDPLPYEIIIDMNH 63 (159)
T ss_dssp TSBSGGGGSSS---CTTCCEECCCTT-----CCCCSCEEEEEEEEE
T ss_pred CCCcHHhcCCC---CCCCeEEcCCcC-----CCCCCCEEEEEECCC
Confidence 35789999995 345899986431 112245789999874
No 47
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=81.04 E-value=0.76 Score=35.47 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=24.0
Q ss_pred CCCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 129 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 129 ~~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
..|++++|+|.+ ..|+|.+.... +... .-.|+|||||
T Consensus 37 ~G~~~~~liDgn---~~T~Wht~w~~----~~~~--P~~itIDLg~ 73 (172)
T 3hnm_A 37 MGWGVESLIDNN---PGTQWLCRWDV----KEPL--PYYFVFDMGK 73 (172)
T ss_dssp TSCSGGGGSSSC---TTSCEECCCSS----CCCS--CEEEEEEEEE
T ss_pred cCccHHHcCCCC---CCCeEEecCCC----CCCC--CEEEEEECCC
Confidence 358999999953 35999984211 1122 3568888875
No 48
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=80.21 E-value=0.92 Score=34.04 Aligned_cols=59 Identities=12% Similarity=-0.023 Sum_probs=35.0
Q ss_pred ccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCC-CCCccccccCCCCCceeecCCCCCCCCC
Q psy17215 80 HKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGR-FPAEYLTDLNNPSNVTCWRSEAQTSVNS 158 (174)
Q Consensus 80 ~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~-Hp~~~ltD~~~~~~~TwWQS~~~~~~~~ 158 (174)
..|||.|+ +..+||+.+... .. .++++.+|- +..|.|.|..-.
T Consensus 8 ~~NlA~gk---------~a~aSS~~~~~~--------------------~~~~~a~~AvDG---n~~t~w~s~sc~---- 51 (158)
T 1k12_A 8 QENVAVRG---------KATQSAQLRGEH--------------------AANSEASNAIDG---NRDSNFYHGSCT---- 51 (158)
T ss_dssp EEEGGGGS---------EEEESCBCCSTT--------------------GGGCCGGGGGSS---CCCCCGGGSCSC----
T ss_pred cccccCCC---------eeEECcccCCCC--------------------cccCCccccCcC---CCCCccccccEe----
Confidence 46999999 999999987310 01 257778883 345678764211
Q ss_pred CCCCCCeeEEEEeCCC
Q psy17215 159 LSASPDNVTLTLSLEK 174 (174)
Q Consensus 159 ~~~~p~~VtltLdLgk 174 (174)
-.....+--|++|||+
T Consensus 52 ~T~~~~~~W~~VDLg~ 67 (158)
T 1k12_A 52 HSSGQANPWWRVDLLQ 67 (158)
T ss_dssp CBCSCSSCEEEEEEEE
T ss_pred cCCCCCCCEEEEECCC
Confidence 0001134567777764
No 49
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=79.85 E-value=1.7 Score=38.99 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=36.2
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCc-eee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSW-QPL 47 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W-~p~ 47 (174)
..|+|||++.+.|..|.++.... ..++...-|+-|.| |.+| +..
T Consensus 70 ~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i~~S~D-g~~w~~~v 117 (656)
T 1k3i_A 70 HTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSD-GTNWGSPV 117 (656)
T ss_dssp EEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEEESS-SSCCCSCS
T ss_pred ceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEEEEECC-CCCcceee
Confidence 46999999999999999987621 23789999999998 8899 654
No 50
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=79.07 E-value=1.9 Score=30.52 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=32.7
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCC
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKS 43 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~ 43 (174)
.-|+|||++.+.|+.|.++.... ..++..+.|+-|.| |.+
T Consensus 53 ~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~D-g~~ 94 (143)
T 2v72_A 53 QSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHAINN-GVE 94 (143)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEEET-TEE
T ss_pred EEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEEEcC-CCc
Confidence 46999999999999999998632 35778899999988 554
No 51
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=78.60 E-value=2 Score=38.57 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=34.3
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---------CCCCCeEEEEEecCCCCCceeeec
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---------SIKPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---------sprP~s~~iekS~d~G~~W~p~qy 49 (174)
|+|||++...|+.|+++.... ..--.+..|+-|.| |.+|+.|.-
T Consensus 466 LqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~~S~d-g~~W~~~~~ 518 (579)
T 2qqk_A 466 LQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-GKDWEYIQD 518 (579)
T ss_dssp EEEEEEEEEEEEEEEEECBC---------CCBCEEEEEEEEESS-SSCCEECBC
T ss_pred EEEecCCceEEEEEEeCCCCCCCCccccccceeeEEEEEEEEcC-CCceeEEEc
Confidence 899999999999999997720 12235577888887 899998864
No 52
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=77.99 E-value=2.1 Score=31.88 Aligned_cols=19 Identities=21% Similarity=0.024 Sum_probs=15.4
Q ss_pred ccccccCCCcccccccccceeeEecccc
Q psy17215 78 DRHKKQGKGKMSRRRTNCQEVKVNSVCG 105 (174)
Q Consensus 78 p~~s~la~g~~~~~~~~~~~v~assTCG 105 (174)
+...|||.|+ +..+||+.+
T Consensus 13 ~~~~NlAlgk---------~at~SS~~~ 31 (151)
T 2j1v_A 13 DGNLNIAYAK---------PTTQSSVDY 31 (151)
T ss_dssp TTEECTTTTC---------CEEESCCCT
T ss_pred CCCccccCCC---------CeeECCCCC
Confidence 3456999999 889998875
No 53
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=77.33 E-value=1.3 Score=36.17 Aligned_cols=56 Identities=11% Similarity=-0.061 Sum_probs=35.7
Q ss_pred ccccCCCcccccccccceeeEeccccCCCCceeeeccCcccccCCCCCCCCCC-CccccccCCCCCceeecCCCCCCCCC
Q psy17215 80 HKKQGKGKMSRRRTNCQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFP-AEYLTDLNNPSNVTCWRSEAQTSVNS 158 (174)
Q Consensus 80 ~s~la~g~~~~~~~~~~~v~assTCG~~~pe~~C~~~~~C~~Cd~~~p~~~Hp-~~~ltD~~~~~~~TwWQS~~~~~~~~ 158 (174)
..|||.|+ +..+||+.+. .++ +++++|- +..|+|.+..-. +
T Consensus 3 ~~NlA~~k---------~a~aSS~~~~-----------------------~~~~a~~AvDG---~~~t~W~s~~c~-~-- 44 (293)
T 3cqo_A 3 YKNVALRG---------KATQSARYLH-----------------------THGAAYNAIDG---NRNSDFEAGSCT-H-- 44 (293)
T ss_dssp CEEGGGGS---------EEEESSBCSS-----------------------TTCCGGGGGSS---CCCCCGGGSCSC-C--
T ss_pred CcccCCCC---------ceeECcCCCC-----------------------CCCCcCccccC---CCCCccCCCcee-c--
Confidence 35899999 9999998772 245 7788884 345788876421 0
Q ss_pred CCCCCCeeEEEEeCCC
Q psy17215 159 LSASPDNVTLTLSLEK 174 (174)
Q Consensus 159 ~~~~p~~VtltLdLgk 174 (174)
.....+--|+||||+
T Consensus 45 -t~~~~~~W~~VDLg~ 59 (293)
T 3cqo_A 45 -TVEQTNPWWRVDLLE 59 (293)
T ss_dssp -BCSBSSCEEEEEEEE
T ss_pred -CCCCCCCEEEEECCC
Confidence 000134567888864
No 54
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=75.50 E-value=1.5 Score=31.14 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=24.7
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.|++++++|.+ ..|+|.|.... ........|+|||++
T Consensus 25 ~~~~~~~~DG~---~~t~w~s~~~~-----~~~~~~~~l~iDLg~ 61 (150)
T 2j1a_A 25 NAPASFASDGD---MNTFWHSKWSS-----PAHEGPHHLTLELDN 61 (150)
T ss_dssp CBCGGGGSSSC---TTCCEECCCSS-----SCCCSCCEEEEEEEE
T ss_pred CCcHHhcCcCC---CCCcEEccccC-----CCCCCCeEEEEECCC
Confidence 48899999953 35899986431 011245788888874
No 55
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=74.09 E-value=2.1 Score=40.16 Aligned_cols=45 Identities=9% Similarity=0.131 Sum_probs=35.7
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d~G~~W~p~q 48 (174)
.-|+|||++.+.|..|.++.... ..++...-|+-|.| |.+|.++.
T Consensus 640 ~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~S~D-G~~W~~v~ 686 (737)
T 2v5d_A 640 HHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLD-GENFTEVK 686 (737)
T ss_dssp CEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESS-SSCCCCSE
T ss_pred eEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEEEcC-CCceEEEE
Confidence 35899999999999999986511 23567889999988 88998764
No 56
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=73.76 E-value=2.6 Score=36.56 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=33.6
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCC-----CCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSI-----KPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sp-----rP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+... .-.+..|+-|.| |.+|..+.
T Consensus 190 lqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 237 (450)
T 2qqm_A 190 IQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 237 (450)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSEEECB
T ss_pred EEEcccceEEEEEEeccCCCCCCCCcceeEEEEEEEEeCC-CCceeEEe
Confidence 89999999999999999772211 224567888988 89999864
No 57
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=72.91 E-value=2 Score=39.18 Aligned_cols=54 Identities=17% Similarity=0.117 Sum_probs=38.3
Q ss_pred eEEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeeecchhhhhhhc
Q psy17215 4 CEGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLY 58 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~qyfa~~C~~~F 58 (174)
-|+|||++...|+.|.++.... ...-.+..|+-|.| |.+|..|.=-+....+.|
T Consensus 385 wlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~yS~D-g~~W~~~~~~~~~~~~~f 441 (647)
T 1sdd_B 385 WIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAYSLD-RKNWRIFKGNSTRNVMYF 441 (647)
T ss_dssp CEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEEEEESS-SSSCEECCSSCSSSSCCE
T ss_pred eEEeccCCeEEEEEEEEcCCCCCCCccEEEEEEEEEEcC-CCceEEecccCCCcceEe
Confidence 4899999999999999998621 12335678999998 889988753322223445
No 58
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=71.99 E-value=2.3 Score=31.80 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=24.8
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
..++++|+|. +..|+|.|.... ...+....|+||||+
T Consensus 37 ~g~~~~a~DG---~~~T~W~s~~~~-----~~~~~p~wi~vDLg~ 73 (169)
T 3ggl_A 37 NGLAKCLIDG---DTETFWHAKWQG-----GSDPLPYDIVIDMKQ 73 (169)
T ss_dssp CBSGGGGGSS---CSSCCEECCCSS-----CCCCSCEEEEEEEEE
T ss_pred CCcHHhcCCC---CCCCceEccCcC-----CCCCCCEEEEEECCC
Confidence 4689999995 346899886421 111245789999875
No 59
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=71.83 E-value=5.3 Score=34.35 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=33.4
Q ss_pred EEeeCCCeEEEEEEEEEeeeCC----CCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKS----IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~s----prP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++-.+.+ .--.+..|+=|.| |.+|..|+
T Consensus 62 LQVDLg~~~~VtgV~TQGr~~~g~~~~wVtsY~l~yS~D-G~~W~~y~ 108 (351)
T 4ag4_A 62 LQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRD-GRRWMGWK 108 (351)
T ss_dssp EEEEEEEEEEEEEEEEECBCGGGTCCBCCSEEEEEEESS-SSCEEECC
T ss_pred EEecCCCeEEEEEEEEecccCCCCccceEEEEEEEEEeC-CCcEEEEE
Confidence 8999999999999999865211 1235677888888 89999875
No 60
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=71.33 E-value=4 Score=30.53 Aligned_cols=44 Identities=7% Similarity=-0.047 Sum_probs=30.6
Q ss_pred eEEeeCCCeEEEEEEEEEeee--C-CCCCCeEEEEEecCCCCCceee
Q psy17215 4 CEGQSYGKKFELTYISLSFCP--K-SIKPDSLAIYKSQDFGKSWQPL 47 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~--~-sprP~s~~iekS~d~G~~W~p~ 47 (174)
-++||||+.+.|..|+|.-.. . ..|-..+-|+-+.++|.+|...
T Consensus 56 W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~~~~I~v~s~dg~~w~~~ 102 (153)
T 4gwi_A 56 WWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVARQ 102 (153)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCEEEEEEEEEcccCCchhhcccceEEEEECCCCCeeeee
Confidence 489999999999999996330 0 2355556676554458888763
No 61
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=69.69 E-value=4.7 Score=35.84 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=35.9
Q ss_pred eeEEeeCCCeEEEEEEEEEeee-CCCCCCeEEEEEecCCCCCceee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCP-KSIKPDSLAIYKSQDFGKSWQPL 47 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~-~sprP~s~~iekS~d~G~~W~p~ 47 (174)
-.|+|||++...|..|.|+-.. ...|=.+..||-|.| |++|++.
T Consensus 366 ~wl~vDLg~~~~vn~V~lqe~i~~gqrv~~y~Ve~s~D-G~~W~~v 410 (469)
T 3eyp_A 366 ADIIFTLPKTIEFDCLMIEEVIELGHRTTKWSVEYTVD-GKNWITI 410 (469)
T ss_dssp EEEEEEEEEEEEEEEEEEEECGGGCSCEEEEEEEEESS-SSCCEEC
T ss_pred cEEEEECCCCcEEeEEEEeecccCCCCeEEEEEEEEcC-CCceEEE
Confidence 3599999999999999998541 145678899999987 8899884
No 62
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=69.26 E-value=4.7 Score=29.93 Aligned_cols=17 Identities=18% Similarity=-0.031 Sum_probs=14.4
Q ss_pred ccccCCCcccccccccceeeEecccc
Q psy17215 80 HKKQGKGKMSRRRTNCQEVKVNSVCG 105 (174)
Q Consensus 80 ~s~la~g~~~~~~~~~~~v~assTCG 105 (174)
..|||.|+ +..+||+..
T Consensus 12 ~~NlAlgk---------~a~~SS~~~ 28 (148)
T 2j22_A 12 LSNIALTK---------ETRQSSTDY 28 (148)
T ss_dssp CEETTTTC---------EEEESCCCT
T ss_pred CccccCCC---------ceeECCCCC
Confidence 56999999 889988875
No 63
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=68.97 E-value=2.3 Score=33.13 Aligned_cols=30 Identities=27% Similarity=0.479 Sum_probs=20.9
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEE
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTL 170 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltL 170 (174)
.+.+..|+|. +..|+|||.... |.-++|++
T Consensus 38 g~gv~~L~D~---~~~TyWqSdg~q--------pH~I~i~f 67 (171)
T 1jhj_A 38 GFGVDQLRDD---NLETYWQSDGSQ--------PHLVNIQF 67 (171)
T ss_dssp TBSTHHHHSS---CTTCCEECCSSS--------SEEEEEEE
T ss_pred CCChHHcCCC---CCCeeEccCCCC--------CeEEEEEE
Confidence 3678899993 456999998542 56666654
No 64
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=68.72 E-value=2.5 Score=38.57 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=33.6
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeeec
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~qy 49 (174)
|+|||++...|+.|+++..+. ..--.+..|+-|.| |.+|..|.=
T Consensus 546 LqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~l~~S~d-g~~W~~~~~ 592 (647)
T 1sdd_B 546 LQIDLLKIKKITAIVTQGCKSLSSEMYVKSYTIHYSDQ-GTDWKPYRE 592 (647)
T ss_dssp EEEEEEEEEEEEEEEEECEEETTEEEEEEEECEEEESS-SSCCEECCC
T ss_pred EEEeCCCceEEEEEEeecCCCCCCCcceEEEEEEEECC-CCcEEEEEc
Confidence 899999999999999987621 11224567888888 899998763
No 65
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=66.20 E-value=3.9 Score=33.17 Aligned_cols=31 Identities=23% Similarity=0.482 Sum_probs=21.4
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEe
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLS 171 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLd 171 (174)
-+.+..|+|. +..|+|||... + |.-++|++.
T Consensus 69 g~gV~~L~D~---s~~TyWQSDG~-------q-PH~ItI~f~ 99 (221)
T 1gqp_A 69 GNPVDFALDD---NYDTFWQSDGG-------Q-PHQLDIMFS 99 (221)
T ss_dssp TCCGGGGSSS---CTTCCEECCSS-------S-SEEEEEEEE
T ss_pred cCCHHHhcCC---CccceeccCCC-------C-CeEEEEEEc
Confidence 3578888883 44699999643 2 577777764
No 66
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=65.07 E-value=6.4 Score=33.63 Aligned_cols=22 Identities=32% Similarity=0.457 Sum_probs=18.5
Q ss_pred CCCeEEEEEecCCCCCceeeec
Q psy17215 28 KPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 28 rP~s~~iekS~d~G~~W~p~qy 49 (174)
....+.|+||.|.|++|+..+.
T Consensus 53 ~~~~~~v~rS~DgG~TW~~~~~ 74 (367)
T 2ydt_A 53 PNVWFPIVKSKDGGKTWKEISK 74 (367)
T ss_dssp SCCCEEEEEESSTTSSCEEEEE
T ss_pred CCeEEEEEEECCCCcCcCcCcc
Confidence 3356799999999999999865
No 67
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=64.80 E-value=5.4 Score=34.68 Aligned_cols=43 Identities=16% Similarity=0.043 Sum_probs=32.9
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCC-----CCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSI-----KPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sp-----rP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++...... --.+..|+-|.| |.+|..|+
T Consensus 188 lqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 235 (460)
T 2qqo_A 188 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTN-GEDWMVYR 235 (460)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred EeccCCceEEEEEEEeecCCCCCCCccceEEEEEEEEEcC-CCCeeEec
Confidence 88999999999999999762111 113467888988 89999875
No 68
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=64.54 E-value=3.7 Score=28.91 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=24.4
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.+++..++|.+ ..|+|.+.... .. .....|+||||+
T Consensus 26 ~~~~~~~~Dg~---~~t~w~~~w~~----~~--~~~~~l~vDLg~ 61 (143)
T 2v72_A 26 QDPASSAIDGN---INTMWHTKWNG----SD--ALPQSLSVNLGK 61 (143)
T ss_dssp TBCGGGGSSSC---TTCCEECCTTS----CS--CSCEEEEEEEEE
T ss_pred CChHHhccCCC---CCCceecCCCC----CC--CCCEEEEEECCC
Confidence 57889999953 34889876432 11 146789999874
No 69
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=62.70 E-value=6 Score=35.39 Aligned_cols=43 Identities=16% Similarity=0.043 Sum_probs=33.3
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCC-----CCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSI-----KPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sp-----rP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++...... --.+..|+-|.| |.+|..|.
T Consensus 307 lqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 354 (579)
T 2qqk_A 307 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTN-GEDWMVYR 354 (579)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred EEeecceeEEEEEEEccCCccCCCCcccceEEEEEEEECC-CCceeeee
Confidence 89999999999999999762211 113567888988 89999875
No 70
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=61.36 E-value=2.8 Score=37.48 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=24.1
Q ss_pred CCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 131 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 131 Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
|.+++++|. +..|+|.++... ....|+|||++
T Consensus 368 ~~~~~a~Dg---n~~TyW~a~~~~---------~~~~l~idLg~ 399 (478)
T 3ues_A 368 AAAAHLVDG---NRDTFWRPDADD---------AAPAITLTLPQ 399 (478)
T ss_dssp GGGGGGSSS---CTTCCBCCCTTC---------SSCEEEEEEEE
T ss_pred cChhhcccC---CCCceEeCCCCC---------CCeeEEEECCC
Confidence 889999994 567999998653 34578888764
No 71
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=60.58 E-value=10 Score=34.05 Aligned_cols=44 Identities=11% Similarity=0.079 Sum_probs=33.4
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCC---CCCeEEEEEecCCCCCceeeec
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSI---KPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sp---rP~s~~iekS~d~G~~W~p~qy 49 (174)
|+|||++...|+.|+++=.++.. --.+..|.=|.| |.+|.+|+-
T Consensus 467 LqVDLg~~~~VtgV~tQG~~~~~~~~~vtsY~l~yS~D-g~~W~~~~~ 513 (577)
T 4gz9_A 467 LQVDLGDEKIVRGVIIQGGKHRENKVFMRKFKIAYSNN-GSDWKTIMD 513 (577)
T ss_dssp EEEEEEEEEEEEEEEEECEESSSCEECEEEEEEEEESS-SSSCEECBC
T ss_pred EEEECCCcEEEEEEEEeCCCCCCcceeEEEEEEEEECC-CCCeEEEEc
Confidence 89999999999999998652222 124567777887 899998863
No 72
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=59.23 E-value=2.9 Score=39.27 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=17.1
Q ss_pred eEEeeCCCeEEEEEEEEEeeeCCCCCCeEEEEEecCCCCCceeee
Q psy17215 4 CEGQSYGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~~sprP~s~~iekS~d~G~~W~p~q 48 (174)
.|+|||++...|..|.+.+..++. ...-.||=|.| |++|++.-
T Consensus 630 wi~VdL~~~~~V~~I~i~~~~~~~-~~~~~ve~S~D-Gk~W~~v~ 672 (716)
T 2cho_A 630 SVEIELDAIYPGENIQINFGKDAP-CTWGRLEISTD-AKEWKTVD 672 (716)
T ss_dssp -CEEEEEEEEEEEEEEECC--------------------------
T ss_pred EEEEEcCCcEEEEEEEEecCCCCC-CceEEEEEECC-CCCccCCC
Confidence 478999999999999999884442 23478899999 89999984
No 73
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=58.13 E-value=10 Score=32.16 Aligned_cols=22 Identities=32% Similarity=0.682 Sum_probs=18.4
Q ss_pred CCeEEEEEecCCCCCceeeecc
Q psy17215 29 PDSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 29 P~s~~iekS~d~G~~W~p~qyf 50 (174)
...+.|+||.|.|++|+..+.-
T Consensus 49 ~~~~~v~rS~DgG~TW~~~~~v 70 (355)
T 3a72_A 49 AVYFPIYRSKDHGKTWNEISRV 70 (355)
T ss_dssp CCCEEEEEESSTTSCCEEEEEE
T ss_pred CceEEEEEEcCCCcCcCCCccc
Confidence 3557899999999999998653
No 74
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=56.13 E-value=14 Score=33.27 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=30.5
Q ss_pred EEeeCCCeEEEEEEEEEeeeCCCCC-----CeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPKSIKP-----DSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~sprP-----~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|..+=.+....- .+..|+-|.| |.+|..|+
T Consensus 308 lqVDl~~~~~it~v~tQG~~~~~~~~~~~v~~y~v~~s~d-g~~w~~y~ 355 (577)
T 4gz9_A 308 IQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDISSN-GEDWISLK 355 (577)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECB
T ss_pred EEEcCCCEEEEEEEEccCCCCCCCCcceeEEEEEEEEEcC-CCcEEEEe
Confidence 8999999999999998632112211 2355777877 88999875
No 75
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=55.85 E-value=6.6 Score=33.54 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=17.9
Q ss_pred CCeEEEEEecCCCCCceeeec
Q psy17215 29 PDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 29 P~s~~iekS~d~G~~W~p~qy 49 (174)
...+.++||.|.|+||++..-
T Consensus 118 ~~~i~v~~S~D~G~TW~~~~~ 138 (367)
T 2ydt_A 118 ETLIEVYASRDKGYTWEFVSH 138 (367)
T ss_dssp CEEEEEEEESSSSSCCEEEEE
T ss_pred CCeEEEEEECCCCCCCcCCee
Confidence 346889999999999998764
No 76
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=53.77 E-value=7.7 Score=32.90 Aligned_cols=22 Identities=27% Similarity=0.591 Sum_probs=18.2
Q ss_pred CeEEEEEecCCCCCceeeecch
Q psy17215 30 DSLAIYKSQDFGKSWQPLQFYS 51 (174)
Q Consensus 30 ~s~~iekS~d~G~~W~p~qyfa 51 (174)
..+.|+||.|.|+||++..-.+
T Consensus 114 ~~~~v~~S~D~G~TW~~~~~i~ 135 (355)
T 3a72_A 114 TDIVLYASQDDGMTWDFVSHIA 135 (355)
T ss_dssp EEEEEEEESSTTSCCEEEEEEE
T ss_pred ceEEEEEECCCCccCccCcccc
Confidence 4678999999999999987533
No 77
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=51.83 E-value=19 Score=26.64 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=23.5
Q ss_pred EEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEec
Q psy17215 5 EGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQ 38 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~ 38 (174)
++||||+.|.|..|.|..... ..|-..+-|+-+.
T Consensus 61 ~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~i~v~~ 96 (158)
T 1k12_A 61 WRVDLLQVYTITSVTITNRGDCCGERISGAEINIGQ 96 (158)
T ss_dssp EEEEEEEEEEEEEEEEEECSSSCTTTTTTCEEEEES
T ss_pred EEEECCCceEEeEEEEEeCCCcCccccCCEEEEEEc
Confidence 889999999999999987411 2344444454443
No 78
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=49.95 E-value=19 Score=32.05 Aligned_cols=44 Identities=7% Similarity=-0.015 Sum_probs=35.8
Q ss_pred eEEeeCCCeEEEEEEEEEeee-CCCCCCeEEEEEecCCCCCceeee
Q psy17215 4 CEGQSYGKKFELTYISLSFCP-KSIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~-~sprP~s~~iekS~d~G~~W~p~q 48 (174)
.|+|||++...|..|.|+..- ..-|=.+..||-|.| |.+|+++.
T Consensus 392 ~l~idLg~~~~~n~v~IqE~i~~gqRV~~y~Ve~~~d-gg~W~~va 436 (478)
T 3ues_A 392 AITLTLPQPTTINAIVIEEAIEHGQRIEHLRVTGALP-DGTERVLG 436 (478)
T ss_dssp EEEEEEEEEEEEEEEEEEECGGGCCCEEEEEEEEECT-TSCEEEEE
T ss_pred eEEEECCCCcEEEEEEEeecccCCCceEEEEEEEEeC-CCCEEEEE
Confidence 599999999999999998541 255778899999887 67898865
No 79
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=48.98 E-value=5.6 Score=37.48 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=34.3
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|.++..+. ...-.+..|+-|.| |.+|..|.
T Consensus 509 LQVDLg~~~~Vt~V~tQG~~~~~~~~~v~sY~I~yS~D-G~~W~~y~ 554 (770)
T 2r7e_B 509 IKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLD-GKKWQTYR 554 (770)
T ss_dssp EEEEEEEEEEECBCCCCCEECSSSEECCSEEEEEEESS-SSSCBCCC
T ss_pred EEecCCceEEEEEEEEcccCcCCcccceEEEEEEEecC-CCccEEee
Confidence 899999999999999986621 12456788999998 78998865
No 80
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=47.96 E-value=6.5 Score=37.02 Aligned_cols=43 Identities=21% Similarity=0.283 Sum_probs=33.7
Q ss_pred EEeeCCCeEEEEEEEEEeeeC---CCCCCeEEEEEecCCCCCceeee
Q psy17215 5 EGQSYGKKFELTYISLSFCPK---SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~---sprP~s~~iekS~d~G~~W~p~q 48 (174)
|+|||++...|+.|+++-.+. ..--.+..|+-|.| |.+|..|.
T Consensus 668 LQVDLg~~~~VtgV~tQG~~~~~~~~~VtsY~l~yS~D-G~~W~~y~ 713 (770)
T 2r7e_B 668 LQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQD-GHQWTLFF 713 (770)
T ss_dssp EEECCSSCCCBCCEEECCCCCTTCCCCCCEEEECCBSS-TTCBCCCB
T ss_pred EEEccccceEEEEEEEeCCcCcCcccceEEEEEEEEcC-CCcEEEEe
Confidence 899999999999999986621 12346788888877 89999865
No 81
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=46.62 E-value=22 Score=28.79 Aligned_cols=40 Identities=20% Similarity=0.103 Sum_probs=29.9
Q ss_pred eCCC--eEEEEEEEEEeeeCC-CCCCeEEEEEecCCCCCceeee
Q psy17215 8 SYGK--KFELTYISLSFCPKS-IKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 8 dL~~--~f~v~~v~l~f~~~s-prP~s~~iekS~d~G~~W~p~q 48 (174)
||++ ...|+.|..+..+.. .--.+..|+-|.| |.+|..|+
T Consensus 63 DLg~~~~~~VtgV~tQG~~~~~~~VtsY~l~yS~d-g~~W~~y~ 105 (254)
T 2wn3_A 63 VAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLD-NVSWFEYR 105 (254)
T ss_dssp EEEEEEEEEEEEEEEECCSSSSCEEEEEEEEEESS-SSSCEEGG
T ss_pred EcCCCeEEEEEEEEEeCCCCCCCceEEEEEEEECC-CCcEEEec
Confidence 9999 999999999977211 1124567888888 88999864
No 82
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=41.34 E-value=33 Score=25.18 Aligned_cols=35 Identities=3% Similarity=-0.035 Sum_probs=26.8
Q ss_pred EEeeCCCeEEEEEEEEEeeeC--CCCCCeEEEEEecC
Q psy17215 5 EGQSYGKKFELTYISLSFCPK--SIKPDSLAIYKSQD 39 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~~~--sprP~s~~iekS~d 39 (174)
++||||+.|.|..|+|..... ..|-..+-|+=+.|
T Consensus 63 ~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~I~v~~~ 99 (151)
T 2j1v_A 63 WEVDLKKMDKVGLVKIYNRTDAETQRLSNFDVILYDN 99 (151)
T ss_dssp EEEEEEEEEEEEEEEEEECCSSCGGGSCSEEEEEECT
T ss_pred EEEECCCCeEcCEEEEEcCCCccccccCCEEEEEECC
Confidence 789999999999999986511 23556677877766
No 83
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=38.23 E-value=39 Score=25.45 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=29.7
Q ss_pred eEEeeCCCeEEEEEEEEEeeeCC---CCCCeEEEEEecC-CCCCceeee
Q psy17215 4 CEGQSYGKKFELTYISLSFCPKS---IKPDSLAIYKSQD-FGKSWQPLQ 48 (174)
Q Consensus 4 ~ltldL~~~f~v~~v~l~f~~~s---prP~s~~iekS~d-~G~~W~p~q 48 (174)
-|+||||+.....--.++|.|.. .|+....||=|.| ++++|..+.
T Consensus 46 ~i~iDLG~~~~~~l~~f~Y~Pr~~~~~~miGg~fegSnd~Df~~~~tL~ 94 (155)
T 2yfu_A 46 WLGLDFGEGVRNVITQIKFCPRSGYEQRMIGGIFQGANKEDFSDAVTLF 94 (155)
T ss_dssp EEEEECCTTCCEEEEEEEEECCTTCGGGGTTCEEEEESSTTCTTCEEEE
T ss_pred eEEEECCCCcceEEeeEEEecCcccccCCcEEEEEEECCCCCCCeEEEE
Confidence 48999999763233334555544 3566788999985 268888654
No 84
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=34.46 E-value=42 Score=31.66 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=20.8
Q ss_pred CeEEEEEecCCCCCceeeecchh
Q psy17215 30 DSLAIYKSQDFGKSWQPLQFYSS 52 (174)
Q Consensus 30 ~s~~iekS~d~G~~W~p~qyfa~ 52 (174)
+.++|+-|.|.|.+|.+++.|..
T Consensus 300 e~V~LqYS~dgGltW~~l~~~~~ 322 (725)
T 2e26_A 300 QPVLLQYSLNGGLSWSLLQEFLF 322 (725)
T ss_dssp CCEEEEEESSTTSSCEEEEEECC
T ss_pred ccEEEEEEcCCCcceEeeeEeec
Confidence 68999999999999999998654
No 85
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=34.42 E-value=19 Score=33.33 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=17.9
Q ss_pred CCeEEEEEecCCCCCceeeec
Q psy17215 29 PDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 29 P~s~~iekS~d~G~~W~p~qy 49 (174)
+..+++.||.|.|+||++-+.
T Consensus 242 ~~~i~~~rS~D~G~TW~~~~~ 262 (679)
T 2sli_A 242 KINIAFAKSTDGGNTWSEPTL 262 (679)
T ss_dssp CEEEEEEEESSTTSSCCCCEE
T ss_pred CeEEEEEEECCCCcCCCCCEE
Confidence 445899999999999998764
No 86
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=34.29 E-value=8.4 Score=38.78 Aligned_cols=46 Identities=7% Similarity=-0.133 Sum_probs=0.0
Q ss_pred eeEEeeCCCeEEEEEEEEEeeeC----CCCCCeEEEEEecCCCCCceeee
Q psy17215 3 FCEGQSYGKKFELTYISLSFCPK----SIKPDSLAIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 3 v~ltldL~~~f~v~~v~l~f~~~----sprP~s~~iekS~d~G~~W~p~q 48 (174)
.-|+|||++...|+.|.++-... ...+...-|+=|.|+|.+|+++.
T Consensus 1272 qWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nWttVa 1321 (1376)
T 2zxq_A 1272 AWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTKDVVT 1321 (1376)
T ss_dssp --------------------------------------------------
T ss_pred eEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeEEEEE
Confidence 34899999999999988654311 23567888999995699998864
No 87
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=34.18 E-value=28 Score=30.40 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=18.3
Q ss_pred CeEEEEEecCCCCCceeeecc
Q psy17215 30 DSLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 30 ~s~~iekS~d~G~~W~p~qyf 50 (174)
+.+.||.|.|+|.+|..++..
T Consensus 99 ~~V~LeYStd~G~sW~~v~~~ 119 (387)
T 2ddu_A 99 APVLLQYSHDAGMSWFLVKEG 119 (387)
T ss_dssp CCEEEEEESSTTSCCEESCCC
T ss_pred CcEEEEEEeCCCcceEeeecc
Confidence 578999999999999988753
No 88
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=33.67 E-value=20 Score=33.24 Aligned_cols=24 Identities=29% Similarity=0.367 Sum_probs=20.5
Q ss_pred CCCeEEEEEecCCCCCceeeecch
Q psy17215 28 KPDSLAIYKSQDFGKSWQPLQFYS 51 (174)
Q Consensus 28 rP~s~~iekS~d~G~~W~p~qyfa 51 (174)
-...+++-||.|.|+||.+-+.-+
T Consensus 262 ~~i~iv~rRS~DgG~TWs~~~~i~ 285 (686)
T 2jkb_A 262 SKINIATSYSDDNGKTWSEPIFAM 285 (686)
T ss_dssp SCEEEEEEEESSTTSSCCCCEEEE
T ss_pred CCeEEEEEEcCCCCCcCCCCEEcc
Confidence 356799999999999999998653
No 89
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=32.81 E-value=48 Score=28.90 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=19.7
Q ss_pred CeEEEEEecCCCCCceeeecch
Q psy17215 30 DSLAIYKSQDFGKSWQPLQFYS 51 (174)
Q Consensus 30 ~s~~iekS~d~G~~W~p~qyfa 51 (174)
+.++|+-|.|.|.+|..+.+|.
T Consensus 311 egV~LqYS~dgGitW~~l~~~~ 332 (387)
T 2ddu_A 311 EGLVVQYSNDNGILWHLLRELD 332 (387)
T ss_dssp GSEEEEEESSTTSSCEEEEEEC
T ss_pred CcEEEEEEeCCCceEEEeEEec
Confidence 5699999999999999999774
No 90
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=32.51 E-value=27 Score=25.67 Aligned_cols=19 Identities=11% Similarity=-0.107 Sum_probs=17.4
Q ss_pred EEeeCCCeEEEEEEEEEee
Q psy17215 5 EGQSYGKKFELTYISLSFC 23 (174)
Q Consensus 5 ltldL~~~f~v~~v~l~f~ 23 (174)
++||||+.|.|..|+|...
T Consensus 60 w~VDLg~~~~V~~V~i~~r 78 (148)
T 2j22_A 60 WEIDLAQTEELEKLIIYNR 78 (148)
T ss_dssp EEEEEEEEEEEEEEEEEEC
T ss_pred EEEECCCCEEeeEEEEEec
Confidence 7899999999999999865
No 91
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=31.13 E-value=19 Score=34.05 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=19.6
Q ss_pred eEEEEEecCCCCCceeeecchh
Q psy17215 31 SLAIYKSQDFGKSWQPLQFYSS 52 (174)
Q Consensus 31 s~~iekS~d~G~~W~p~qyfa~ 52 (174)
.+++.||.|.|++|.+-+....
T Consensus 259 ~Iv~rRS~DgG~TWs~~~~v~~ 280 (781)
T 1w0p_A 259 DIITRTSRDGGITWDTELNLTE 280 (781)
T ss_dssp EEEEEEESSSSSSCCCCEESSG
T ss_pred eEEEEEcCCCCcccCCcEEEec
Confidence 4899999999999999998754
No 92
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=30.79 E-value=31 Score=30.37 Aligned_cols=22 Identities=32% Similarity=0.477 Sum_probs=18.9
Q ss_pred eEEEEEecCCCCCceeeecchh
Q psy17215 31 SLAIYKSQDFGKSWQPLQFYSS 52 (174)
Q Consensus 31 s~~iekS~d~G~~W~p~qyfa~ 52 (174)
.++|.||.|.|++|++-+....
T Consensus 52 ~i~~~rS~DgG~TW~~~~~l~~ 73 (601)
T 1w8o_A 52 SILQRRSTDGGRTWGEQQVVSA 73 (601)
T ss_dssp EEEEEEESSTTSSCCCCEEEEC
T ss_pred eEEEEEeCCCCCCCCCCEEEec
Confidence 5889999999999999886554
No 93
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=30.10 E-value=48 Score=30.80 Aligned_cols=22 Identities=23% Similarity=0.523 Sum_probs=17.6
Q ss_pred CCCeEEEEEecCCCCCceeeec
Q psy17215 28 KPDSLAIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 28 rP~s~~iekS~d~G~~W~p~qy 49 (174)
|...=.|+||.|.|++|+++.-
T Consensus 61 ~t~~ggvyrS~DgG~TW~~v~~ 82 (685)
T 3f6k_A 61 TFGQSKLYRSEDYGKNFKDITD 82 (685)
T ss_dssp --CEEEEEEESSTTSSCEECGG
T ss_pred eecCCeEEEEeCCCCCceECcC
Confidence 5566789999999999999863
No 94
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=29.70 E-value=27 Score=31.08 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=24.8
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.+++++++|. +..|.|.|.... ....+....|+|||||
T Consensus 41 ~~~~~~~~Dg---~~~T~W~s~~~~----~~~~~~~~~l~vDLg~ 78 (656)
T 1k3i_A 41 GNECNKAIDG---NKDTFWHTFYGA----NGDPKPPHTYTIDMKT 78 (656)
T ss_dssp TSCGGGGSSS---CTTCCEECCCGG----GCCCCSCEEEEEEEEE
T ss_pred CCcHHhcCCC---CCCCEEEeCCCC----CCCCCCCceEEecCCC
Confidence 5889999994 346889887431 0001245789999875
No 95
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=28.31 E-value=28 Score=29.93 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.5
Q ss_pred eEEEEEecCCCCCceeeecchh
Q psy17215 31 SLAIYKSQDFGKSWQPLQFYSS 52 (174)
Q Consensus 31 s~~iekS~d~G~~W~p~qyfa~ 52 (174)
.+++.||.|.|++|++-+....
T Consensus 56 ~i~~~rS~DgG~TWs~~~~v~~ 77 (449)
T 2bf6_A 56 DTAVRRSEDGGKTWDEGQIIMD 77 (449)
T ss_dssp EEEEEEESSTTSSCCCCEEEEC
T ss_pred eEEEEEcCCCCCCCCCCEEeec
Confidence 5899999999999999887765
No 96
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=27.20 E-value=27 Score=30.35 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=18.7
Q ss_pred EEEEEecCCCCCceeeecchh
Q psy17215 32 LAIYKSQDFGKSWQPLQFYSS 52 (174)
Q Consensus 32 ~~iekS~d~G~~W~p~qyfa~ 52 (174)
+++-||.|.|++|.+-+..+.
T Consensus 58 i~~rrs~d~G~tW~~~~~i~~ 78 (471)
T 2w20_A 58 MVIRRSEDNGKTWGDRVTITN 78 (471)
T ss_dssp EEEEEESSTTSSCCCCEEEEC
T ss_pred EEEEECCCCCCcCCCCEEeec
Confidence 689999999999999987764
No 97
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=23.40 E-value=37 Score=31.67 Aligned_cols=37 Identities=30% Similarity=0.408 Sum_probs=24.4
Q ss_pred CCCCccccccCCCCCceeecCCCCCCCCCCCCCCCeeEEEEeCCC
Q psy17215 130 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLEK 174 (174)
Q Consensus 130 ~Hp~~~ltD~~~~~~~TwWQS~~~~~~~~~~~~p~~VtltLdLgk 174 (174)
.+++++++|. +..|+|.|.... ........|++|||+
T Consensus 612 ~~~a~~aiDG---n~~T~W~S~w~~-----~~~~~p~wl~VDLg~ 648 (737)
T 2v5d_A 612 NAPASFASDG---DMNTFWHSKWSS-----PAHEGPHHLTLELDN 648 (737)
T ss_dssp SBCGGGGGSS---CSSCCEECCCSS-----SCCCCCCEEEEEEEE
T ss_pred CCCHHHccCC---CCCCceeccccC-----CCCCCCeEEEEECCC
Confidence 5889999994 446899986421 011135678888874
No 98
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=23.21 E-value=40 Score=27.11 Aligned_cols=16 Identities=25% Similarity=0.634 Sum_probs=14.0
Q ss_pred EEEEecCCCCCceeee
Q psy17215 33 AIYKSQDFGKSWQPLQ 48 (174)
Q Consensus 33 ~iekS~d~G~~W~p~q 48 (174)
.|+||.|.|++|+...
T Consensus 100 ~i~~S~DgG~tW~~~~ 115 (327)
T 2xbg_A 100 IMLHTTDGGQSWSQIP 115 (327)
T ss_dssp EEEEESSTTSSCEECC
T ss_pred eEEEECCCCCCceECc
Confidence 5899999999999754
No 99
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=21.54 E-value=45 Score=27.52 Aligned_cols=22 Identities=23% Similarity=0.455 Sum_probs=17.6
Q ss_pred CeEEEEEecCCCCCceeeecch
Q psy17215 30 DSLAIYKSQDFGKSWQPLQFYS 51 (174)
Q Consensus 30 ~s~~iekS~d~G~~W~p~qyfa 51 (174)
..+.+.||.|.|++|..-+...
T Consensus 124 ~~~~~~~S~DgG~TW~~~~~l~ 145 (382)
T 1so7_A 124 TRLCQVTSTDHGRTWSSPRDLT 145 (382)
T ss_dssp CEEEEEEESSTTSSCCCCEECH
T ss_pred cEEEEEEEcCCCCcCCCCccCC
Confidence 3478999999999999866543
No 100
>2xu8_A PA1645; structural genomics, bacterial virulence; 1.98A {Pseudomonas aeruginosa}
Probab=21.12 E-value=31 Score=24.94 Aligned_cols=16 Identities=31% Similarity=0.347 Sum_probs=12.2
Q ss_pred eEEEEEecCCCCCceeeecc
Q psy17215 31 SLAIYKSQDFGKSWQPLQFY 50 (174)
Q Consensus 31 s~~iekS~d~G~~W~p~qyf 50 (174)
.=+|||..+ |+||||=
T Consensus 39 VeVIeR~~g----~~vWQf~ 54 (116)
T 2xu8_A 39 VEVLERRQG----QQPWQFQ 54 (116)
T ss_dssp EEEEEEETT----CCTTCCE
T ss_pred EEEeeeccC----CCchhHH
Confidence 357899765 8999973
No 101
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=20.03 E-value=53 Score=26.37 Aligned_cols=17 Identities=24% Similarity=0.780 Sum_probs=14.4
Q ss_pred EEEEecCCCCCceeeec
Q psy17215 33 AIYKSQDFGKSWQPLQF 49 (174)
Q Consensus 33 ~iekS~d~G~~W~p~qy 49 (174)
.|+||.|.|++|++...
T Consensus 57 ~i~~s~DgG~tW~~~~~ 73 (327)
T 2xbg_A 57 TLMETRDGGQTWEPRTL 73 (327)
T ss_dssp EEEEESSTTSSCEECCC
T ss_pred eEEEeCCCCCCCeECCC
Confidence 37999999999998754
Done!