Query psy17227
Match_columns 268
No_of_seqs 241 out of 2050
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 16:35:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uwp_A Histone-lysine N-methyl 100.0 1.4E-35 4.7E-40 269.8 19.4 189 2-190 120-309 (438)
2 1u2z_A Histone-lysine N-methyl 99.9 2.2E-24 7.4E-29 199.1 19.7 182 4-185 190-375 (433)
3 2o57_A Putative sarcosine dime 99.8 2.5E-19 8.5E-24 157.3 13.3 121 41-171 64-189 (297)
4 1nkv_A Hypothetical protein YJ 99.8 7.6E-19 2.6E-23 150.6 13.6 125 35-170 16-141 (256)
5 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.3E-18 4.6E-23 150.9 11.5 111 52-173 67-182 (261)
6 3bus_A REBM, methyltransferase 99.8 4E-18 1.4E-22 147.6 13.4 119 42-170 48-167 (273)
7 1pjz_A Thiopurine S-methyltran 99.8 2.3E-18 7.9E-23 143.6 10.9 115 42-166 9-137 (203)
8 1vl5_A Unknown conserved prote 99.8 3E-18 1E-22 147.5 11.8 119 43-173 25-144 (260)
9 4hg2_A Methyltransferase type 99.8 2E-18 6.8E-23 149.5 9.2 105 44-168 30-134 (257)
10 3ujc_A Phosphoethanolamine N-m 99.7 4.6E-18 1.6E-22 146.1 10.6 119 39-170 39-160 (266)
11 3f4k_A Putative methyltransfer 99.7 1.5E-17 5.2E-22 142.5 13.7 123 37-169 27-150 (257)
12 3dlc_A Putative S-adenosyl-L-m 99.7 8.1E-18 2.8E-22 140.2 11.3 123 39-172 28-151 (219)
13 3kkz_A Uncharacterized protein 99.7 1.9E-17 6.5E-22 143.2 12.9 122 39-170 29-151 (267)
14 1xxl_A YCGJ protein; structura 99.7 2.2E-17 7.5E-22 140.7 12.6 122 40-173 6-128 (239)
15 3hem_A Cyclopropane-fatty-acyl 99.7 4.7E-17 1.6E-21 143.4 14.0 116 43-171 60-185 (302)
16 1kpg_A CFA synthase;, cyclopro 99.7 1.1E-16 3.8E-21 139.6 16.1 116 43-171 52-170 (287)
17 3dh0_A SAM dependent methyltra 99.7 4.7E-17 1.6E-21 136.2 12.0 116 44-169 26-143 (219)
18 3vc1_A Geranyl diphosphate 2-C 99.7 5.6E-17 1.9E-21 143.7 13.1 114 46-169 107-221 (312)
19 3g5l_A Putative S-adenosylmeth 99.7 2.7E-17 9.3E-22 140.9 10.1 110 45-168 34-144 (253)
20 3hnr_A Probable methyltransfer 99.7 2.1E-17 7.3E-22 138.4 9.0 110 44-170 34-146 (220)
21 2p35_A Trans-aconitate 2-methy 99.7 3.9E-17 1.3E-21 140.0 10.5 114 40-169 18-132 (259)
22 3jwh_A HEN1; methyltransferase 99.7 9.3E-17 3.2E-21 134.5 12.4 120 41-168 15-140 (217)
23 3fpf_A Mtnas, putative unchara 99.7 6.9E-17 2.3E-21 141.8 11.8 121 33-168 100-221 (298)
24 3jwg_A HEN1, methyltransferase 99.7 9.6E-17 3.3E-21 134.5 12.1 122 39-168 13-140 (219)
25 3g5t_A Trans-aconitate 3-methy 99.7 1.2E-16 4.3E-21 140.4 13.3 121 42-168 23-148 (299)
26 3h2b_A SAM-dependent methyltra 99.7 9.3E-17 3.2E-21 132.9 11.5 133 11-169 5-141 (203)
27 3ege_A Putative methyltransfer 99.7 6.6E-17 2.3E-21 139.6 10.9 110 40-168 19-129 (261)
28 4df3_A Fibrillarin-like rRNA/T 99.7 4.9E-17 1.7E-21 138.4 9.9 109 49-168 71-181 (233)
29 2fk8_A Methoxy mycolic acid sy 99.7 2.6E-16 8.7E-21 139.5 13.7 117 43-172 78-197 (318)
30 3dtn_A Putative methyltransfer 99.7 2.4E-16 8.3E-21 133.3 12.2 116 44-172 32-151 (234)
31 3e05_A Precorrin-6Y C5,15-meth 99.7 1.1E-15 3.8E-20 126.8 15.7 116 41-168 26-141 (204)
32 4htf_A S-adenosylmethionine-de 99.7 2.6E-16 8.8E-21 137.3 12.2 113 44-168 58-172 (285)
33 2xvm_A Tellurite resistance pr 99.7 3.8E-16 1.3E-20 128.3 11.9 114 46-172 23-139 (199)
34 2gb4_A Thiopurine S-methyltran 99.7 3.1E-16 1.1E-20 135.3 11.7 111 52-167 65-189 (252)
35 3p9n_A Possible methyltransfer 99.7 3E-16 1E-20 128.9 10.9 122 38-168 24-152 (189)
36 3mq2_A 16S rRNA methyltransfer 99.7 4.2E-17 1.4E-21 136.8 5.8 116 46-168 18-139 (218)
37 3bkw_A MLL3908 protein, S-aden 99.7 2.5E-16 8.4E-21 133.6 10.6 109 46-168 34-143 (243)
38 3mgg_A Methyltransferase; NYSG 99.7 3E-16 1E-20 136.0 11.2 111 49-169 31-142 (276)
39 1nt2_A Fibrillarin-like PRE-rR 99.7 4.3E-16 1.5E-20 130.7 11.5 104 51-168 53-160 (210)
40 4fsd_A Arsenic methyltransfera 99.7 1.8E-16 6.1E-21 144.6 9.9 114 53-170 81-204 (383)
41 3mti_A RRNA methylase; SAM-dep 99.7 5.3E-16 1.8E-20 126.6 11.4 112 44-168 12-134 (185)
42 2yqz_A Hypothetical protein TT 99.7 4.7E-16 1.6E-20 133.4 11.4 104 52-168 36-140 (263)
43 3ccf_A Cyclopropane-fatty-acyl 99.7 2.6E-16 9E-21 136.9 9.7 106 45-168 47-153 (279)
44 3gu3_A Methyltransferase; alph 99.7 6E-16 2.1E-20 135.2 11.9 117 42-170 8-127 (284)
45 1xtp_A LMAJ004091AAA; SGPP, st 99.7 4.2E-16 1.4E-20 133.1 10.4 114 44-170 82-198 (254)
46 3ou2_A SAM-dependent methyltra 99.6 3.5E-16 1.2E-20 130.4 9.3 110 44-170 34-147 (218)
47 3njr_A Precorrin-6Y methylase; 99.6 2.6E-15 9E-20 125.2 14.6 112 42-168 42-153 (204)
48 2gs9_A Hypothetical protein TT 99.6 2.2E-16 7.4E-21 131.5 7.9 105 45-169 27-132 (211)
49 3l8d_A Methyltransferase; stru 99.6 5.6E-16 1.9E-20 131.5 10.4 102 53-169 51-153 (242)
50 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.5E-15 5.1E-20 122.7 12.1 118 39-168 8-126 (178)
51 3bkx_A SAM-dependent methyltra 99.6 4.8E-15 1.6E-19 128.2 16.0 121 42-171 30-161 (275)
52 3orh_A Guanidinoacetate N-meth 99.6 8.1E-17 2.8E-21 137.4 4.5 104 53-168 58-169 (236)
53 3dli_A Methyltransferase; PSI- 99.6 4.5E-16 1.5E-20 132.5 8.6 107 42-168 27-139 (240)
54 3i9f_A Putative type 11 methyl 99.6 1.4E-16 4.8E-21 128.2 3.8 105 45-169 7-112 (170)
55 3g07_A 7SK snRNA methylphospha 99.6 4.5E-16 1.5E-20 136.8 7.4 119 46-168 35-219 (292)
56 2p8j_A S-adenosylmethionine-de 99.6 7.2E-16 2.5E-20 127.9 8.2 104 53-168 21-127 (209)
57 3ofk_A Nodulation protein S; N 99.6 2E-15 6.7E-20 126.1 10.8 107 47-168 43-153 (216)
58 2p7i_A Hypothetical protein; p 99.6 7.3E-16 2.5E-20 130.7 8.3 108 45-169 31-141 (250)
59 3sm3_A SAM-dependent methyltra 99.6 1.8E-15 6.3E-20 127.3 10.2 107 53-169 28-141 (235)
60 3id6_C Fibrillarin-like rRNA/T 99.6 4.6E-15 1.6E-19 126.3 12.7 114 43-168 61-180 (232)
61 3thr_A Glycine N-methyltransfe 99.6 4.9E-16 1.7E-20 135.8 6.9 116 45-168 47-174 (293)
62 1zx0_A Guanidinoacetate N-meth 99.6 2.7E-16 9.1E-21 133.7 5.0 111 45-168 51-169 (236)
63 2esr_A Methyltransferase; stru 99.6 9.3E-16 3.2E-20 124.3 7.8 120 39-168 14-137 (177)
64 2ift_A Putative methylase HI07 99.6 6E-16 2.1E-20 128.7 6.8 119 43-168 40-162 (201)
65 2fhp_A Methylase, putative; al 99.6 4.6E-15 1.6E-19 120.8 11.9 126 35-168 23-153 (187)
66 2ex4_A Adrenal gland protein A 99.6 6.8E-16 2.3E-20 131.4 7.1 107 54-171 78-187 (241)
67 1ve3_A Hypothetical protein PH 99.6 2E-15 7E-20 126.6 9.9 103 53-168 36-141 (227)
68 1x19_A CRTF-related protein; m 99.6 1.3E-14 4.5E-19 130.8 15.6 119 43-173 178-299 (359)
69 1dus_A MJ0882; hypothetical pr 99.6 7E-15 2.4E-19 119.8 12.3 116 42-168 39-156 (194)
70 2r3s_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 133.0 11.3 120 43-173 151-275 (335)
71 3ocj_A Putative exported prote 99.6 9.1E-16 3.1E-20 135.4 7.5 110 51-170 114-228 (305)
72 3p2e_A 16S rRNA methylase; met 99.6 1E-15 3.5E-20 129.8 7.2 106 53-168 22-138 (225)
73 2aot_A HMT, histamine N-methyl 99.6 1E-15 3.5E-20 134.3 7.2 109 53-168 50-171 (292)
74 1ri5_A MRNA capping enzyme; me 99.6 2E-15 7E-20 131.7 8.9 107 52-168 61-173 (298)
75 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2.9E-15 1E-19 126.4 9.3 104 55-168 34-149 (218)
76 3ckk_A TRNA (guanine-N(7)-)-me 99.6 7.6E-15 2.6E-19 125.2 12.0 112 53-168 44-167 (235)
77 1fbn_A MJ fibrillarin homologu 99.6 3.3E-15 1.1E-19 126.6 9.6 108 44-168 60-177 (230)
78 3eey_A Putative rRNA methylase 99.6 5.8E-15 2E-19 121.6 10.9 114 46-168 13-138 (197)
79 3lcc_A Putative methyl chlorid 99.6 2.2E-15 7.5E-20 127.6 8.4 114 42-168 54-170 (235)
80 3ggd_A SAM-dependent methyltra 99.6 4E-15 1.4E-19 126.7 9.8 105 53-170 54-164 (245)
81 3g2m_A PCZA361.24; SAM-depende 99.6 3.2E-15 1.1E-19 131.4 9.4 116 41-168 69-189 (299)
82 2a14_A Indolethylamine N-methy 99.6 9.9E-16 3.4E-20 132.5 6.0 115 52-169 52-197 (263)
83 3lbf_A Protein-L-isoaspartate 99.6 9.8E-15 3.4E-19 121.4 11.9 111 40-168 62-173 (210)
84 3pfg_A N-methyltransferase; N, 99.6 2.7E-15 9.3E-20 129.2 8.6 104 53-174 48-156 (263)
85 2kw5_A SLR1183 protein; struct 99.6 1E-14 3.5E-19 120.5 11.6 111 42-168 19-130 (202)
86 3e23_A Uncharacterized protein 99.6 1.3E-15 4.6E-20 126.8 6.3 106 42-168 32-140 (211)
87 2fca_A TRNA (guanine-N(7)-)-me 99.6 8.5E-15 2.9E-19 122.9 11.0 105 54-168 37-152 (213)
88 2fyt_A Protein arginine N-meth 99.6 1.6E-14 5.4E-19 129.8 13.4 110 46-166 55-168 (340)
89 3m70_A Tellurite resistance pr 99.6 5.5E-15 1.9E-19 128.9 10.0 109 46-168 111-222 (286)
90 3e8s_A Putative SAM dependent 99.6 1.4E-15 4.8E-20 127.2 5.9 108 45-169 42-152 (227)
91 2g72_A Phenylethanolamine N-me 99.6 1.1E-15 3.7E-20 133.8 5.2 121 45-168 59-214 (289)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.7E-14 9.3E-19 119.4 13.6 105 54-168 40-155 (214)
93 2ipx_A RRNA 2'-O-methyltransfe 99.6 8.6E-15 2.9E-19 124.1 10.7 107 48-168 70-181 (233)
94 1xdz_A Methyltransferase GIDB; 99.6 4.6E-15 1.6E-19 126.5 8.7 106 52-168 67-173 (240)
95 3ntv_A MW1564 protein; rossman 99.6 2.2E-14 7.6E-19 121.7 12.7 117 42-169 58-176 (232)
96 2plw_A Ribosomal RNA methyltra 99.6 2.1E-14 7.2E-19 118.5 12.2 104 44-168 10-153 (201)
97 3q7e_A Protein arginine N-meth 99.6 1.4E-14 4.6E-19 130.6 11.9 106 51-167 62-171 (349)
98 1wzn_A SAM-dependent methyltra 99.6 9.5E-15 3.3E-19 124.8 10.3 112 43-168 29-144 (252)
99 3g89_A Ribosomal RNA small sub 99.6 9.4E-15 3.2E-19 125.7 9.9 105 53-168 78-183 (249)
100 3bxo_A N,N-dimethyltransferase 99.6 9.5E-15 3.3E-19 123.4 9.8 108 46-172 32-144 (239)
101 3lpm_A Putative methyltransfer 99.6 8.5E-15 2.9E-19 126.3 9.6 114 47-168 40-175 (259)
102 3bgv_A MRNA CAP guanine-N7 met 99.6 1.1E-14 3.6E-19 128.9 10.4 108 54-168 33-154 (313)
103 2pxx_A Uncharacterized protein 99.6 7.7E-15 2.6E-19 121.8 8.9 112 43-168 31-158 (215)
104 3gwz_A MMCR; methyltransferase 99.6 5.7E-14 2E-18 127.3 15.2 118 45-174 192-312 (369)
105 3i53_A O-methyltransferase; CO 99.6 1.8E-14 6.2E-19 128.5 11.6 116 47-174 161-279 (332)
106 3cc8_A Putative methyltransfer 99.6 1E-14 3.5E-19 122.1 9.3 104 46-169 24-130 (230)
107 2fpo_A Methylase YHHF; structu 99.6 6.9E-15 2.3E-19 122.4 8.1 120 38-168 36-159 (202)
108 2bm8_A Cephalosporin hydroxyla 99.6 2.1E-14 7.2E-19 122.5 11.3 110 44-169 70-187 (236)
109 3evz_A Methyltransferase; NYSG 99.6 4.3E-14 1.5E-18 119.1 13.1 112 45-168 45-178 (230)
110 2vdw_A Vaccinia virus capping 99.6 6.8E-15 2.3E-19 130.1 8.4 105 55-168 48-168 (302)
111 2qe6_A Uncharacterized protein 99.6 2.8E-14 9.6E-19 124.4 12.2 117 43-169 64-196 (274)
112 1g8a_A Fibrillarin-like PRE-rR 99.5 2.9E-14 9.8E-19 120.2 11.7 115 42-168 57-177 (227)
113 1ws6_A Methyltransferase; stru 99.5 5.8E-15 2E-19 118.3 7.1 121 36-168 20-146 (171)
114 3dp7_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 128.4 13.1 110 54-174 178-292 (363)
115 3dr5_A Putative O-methyltransf 99.5 1.9E-14 6.3E-19 121.7 10.5 120 42-169 43-163 (221)
116 2ip2_A Probable phenazine-spec 99.5 9.1E-14 3.1E-18 123.9 15.4 117 44-173 157-276 (334)
117 3mcz_A O-methyltransferase; ad 99.5 2.7E-14 9.1E-19 128.3 11.9 117 46-173 169-291 (352)
118 2avn_A Ubiquinone/menaquinone 99.5 7E-15 2.4E-19 126.7 7.7 106 44-168 44-151 (260)
119 1dl5_A Protein-L-isoaspartate 99.5 3.6E-14 1.2E-18 126.1 12.5 113 41-168 61-174 (317)
120 3r0q_C Probable protein argini 99.5 3.8E-14 1.3E-18 128.9 12.9 110 47-168 55-168 (376)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.5 3.8E-14 1.3E-18 121.3 12.1 116 39-168 80-197 (258)
122 3sso_A Methyltransferase; macr 99.5 2E-14 6.7E-19 130.6 10.6 111 41-171 203-326 (419)
123 3tfw_A Putative O-methyltransf 99.5 2E-14 7E-19 123.3 10.3 111 52-171 60-172 (248)
124 3iv6_A Putative Zn-dependent a 99.5 6.3E-15 2.1E-19 127.6 7.0 110 42-168 32-147 (261)
125 3mb5_A SAM-dependent methyltra 99.5 3.9E-14 1.3E-18 121.4 11.8 116 39-168 77-193 (255)
126 3cgg_A SAM-dependent methyltra 99.5 1.7E-14 5.7E-19 117.6 9.0 105 46-168 38-146 (195)
127 3grz_A L11 mtase, ribosomal pr 99.5 2.8E-14 9.5E-19 118.3 10.2 114 40-168 43-158 (205)
128 1y8c_A S-adenosylmethionine-de 99.5 1E-14 3.4E-19 123.6 7.6 100 55-168 37-141 (246)
129 1qzz_A RDMB, aclacinomycin-10- 99.5 3.6E-14 1.2E-18 128.4 11.7 114 45-170 172-288 (374)
130 3reo_A (ISO)eugenol O-methyltr 99.5 2.9E-14 9.9E-19 129.3 10.9 109 46-174 193-305 (368)
131 1jsx_A Glucose-inhibited divis 99.5 3.1E-14 1.1E-18 118.0 10.1 110 45-168 52-164 (207)
132 2y1w_A Histone-arginine methyl 99.5 9.2E-14 3.1E-18 125.1 13.9 112 45-168 40-154 (348)
133 3htx_A HEN1; HEN1, small RNA m 99.5 3.1E-14 1.1E-18 138.6 11.5 122 42-168 708-833 (950)
134 2yxd_A Probable cobalt-precorr 99.5 1.3E-13 4.4E-18 111.3 13.4 112 39-168 19-130 (183)
135 3m33_A Uncharacterized protein 99.5 9.8E-15 3.4E-19 123.2 6.9 104 41-167 35-140 (226)
136 3lst_A CALO1 methyltransferase 99.5 2.3E-14 7.7E-19 128.9 9.6 114 46-174 175-291 (348)
137 3tma_A Methyltransferase; thum 99.5 1E-13 3.6E-18 124.9 13.9 121 38-168 186-316 (354)
138 1l3i_A Precorrin-6Y methyltran 99.5 1.1E-13 3.8E-18 112.4 12.5 118 38-168 16-133 (192)
139 4e2x_A TCAB9; kijanose, tetron 99.5 3.4E-15 1.2E-19 137.2 3.8 112 43-168 95-207 (416)
140 2ozv_A Hypothetical protein AT 99.5 4.6E-14 1.6E-18 122.0 10.7 113 47-168 28-169 (260)
141 1tw3_A COMT, carminomycin 4-O- 99.5 9.7E-14 3.3E-18 125.0 13.1 115 45-171 173-290 (360)
142 4dcm_A Ribosomal RNA large sub 99.5 9.8E-14 3.4E-18 126.2 13.2 117 43-168 210-333 (375)
143 1i9g_A Hypothetical protein RV 99.5 6E-14 2.1E-18 121.8 11.1 119 39-169 83-203 (280)
144 1yb2_A Hypothetical protein TA 99.5 3.3E-14 1.1E-18 123.7 9.5 109 45-168 100-210 (275)
145 3p9c_A Caffeic acid O-methyltr 99.5 5.8E-14 2E-18 127.1 11.3 110 45-174 190-303 (364)
146 3duw_A OMT, O-methyltransferas 99.5 4.7E-14 1.6E-18 118.4 9.9 111 52-171 55-169 (223)
147 2gpy_A O-methyltransferase; st 99.5 8.3E-14 2.8E-18 117.9 11.5 121 41-170 40-161 (233)
148 1g6q_1 HnRNP arginine N-methyl 99.5 8.1E-14 2.8E-18 124.5 11.7 109 47-166 30-142 (328)
149 3hp7_A Hemolysin, putative; st 99.5 8E-14 2.8E-18 122.2 11.3 110 43-168 72-184 (291)
150 1fp1_D Isoliquiritigenin 2'-O- 99.5 3E-14 1E-18 129.2 8.7 108 45-172 198-309 (372)
151 3dou_A Ribosomal RNA large sub 99.5 8.1E-14 2.8E-18 115.1 10.4 104 44-168 13-138 (191)
152 3u81_A Catechol O-methyltransf 99.5 5.4E-14 1.9E-18 118.2 9.3 114 50-171 53-172 (221)
153 4dzr_A Protein-(glutamine-N5) 99.5 9.8E-15 3.4E-19 121.0 4.6 118 41-168 15-164 (215)
154 2frn_A Hypothetical protein PH 99.5 1.2E-13 4.2E-18 120.5 11.8 108 45-168 117-224 (278)
155 2yxe_A Protein-L-isoaspartate 99.5 1.6E-13 5.6E-18 114.3 12.0 113 41-168 63-176 (215)
156 3r3h_A O-methyltransferase, SA 99.5 4E-14 1.4E-18 121.2 8.3 111 52-171 57-172 (242)
157 2b3t_A Protein methyltransfera 99.5 2.4E-13 8.1E-18 118.3 13.2 118 39-168 94-237 (276)
158 1vbf_A 231AA long hypothetical 99.5 1.3E-13 4.4E-18 116.3 11.1 111 39-168 54-164 (231)
159 3d2l_A SAM-dependent methyltra 99.5 3.8E-14 1.3E-18 120.0 7.9 108 44-168 24-136 (243)
160 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.8E-13 6.1E-18 117.1 12.1 112 53-168 47-172 (246)
161 3tr6_A O-methyltransferase; ce 99.5 4.7E-14 1.6E-18 118.5 8.3 111 52-171 61-176 (225)
162 1ej0_A FTSJ; methyltransferase 99.5 2.6E-13 8.7E-18 108.6 12.2 104 44-168 10-135 (180)
163 2i62_A Nicotinamide N-methyltr 99.5 1.8E-14 6.1E-19 123.6 5.6 116 52-170 53-199 (265)
164 1jg1_A PIMT;, protein-L-isoasp 99.5 1.5E-13 5E-18 116.6 10.8 113 40-168 76-188 (235)
165 2zfu_A Nucleomethylin, cerebra 99.5 5.9E-14 2E-18 117.1 7.9 94 46-169 57-151 (215)
166 1nv8_A HEMK protein; class I a 99.5 3E-13 1E-17 118.5 12.8 118 41-168 109-248 (284)
167 3dmg_A Probable ribosomal RNA 99.5 1.6E-13 5.4E-18 125.1 11.3 103 53-168 231-339 (381)
168 2yvl_A TRMI protein, hypotheti 99.5 5.1E-13 1.8E-17 113.6 13.5 113 41-168 77-189 (248)
169 2nyu_A Putative ribosomal RNA 99.5 2.8E-13 9.6E-18 111.1 11.5 104 46-168 12-144 (196)
170 2b25_A Hypothetical protein; s 99.5 4.1E-13 1.4E-17 120.0 13.4 122 39-168 89-218 (336)
171 4hc4_A Protein arginine N-meth 99.5 2.6E-13 8.9E-18 123.1 11.9 103 52-166 80-186 (376)
172 3q87_B N6 adenine specific DNA 99.5 7.8E-14 2.7E-18 112.8 7.5 101 44-168 10-122 (170)
173 3c3p_A Methyltransferase; NP_9 99.5 1.4E-13 4.6E-18 114.7 9.0 106 53-170 54-161 (210)
174 1vlm_A SAM-dependent methyltra 99.5 7.9E-14 2.7E-18 116.9 7.6 92 55-169 47-139 (219)
175 4a6d_A Hydroxyindole O-methylt 99.5 1.6E-13 5.5E-18 123.7 9.8 117 45-174 169-288 (353)
176 1fp2_A Isoflavone O-methyltran 99.5 9.3E-14 3.2E-18 125.0 8.1 106 48-173 179-292 (352)
177 1p91_A Ribosomal RNA large sub 99.5 1.9E-13 6.6E-18 117.9 9.7 95 54-169 84-178 (269)
178 3a27_A TYW2, uncharacterized p 99.5 2.6E-13 8.9E-18 118.1 10.5 104 51-168 115-218 (272)
179 1o54_A SAM-dependent O-methylt 99.5 3.2E-13 1.1E-17 117.4 11.0 117 39-169 96-213 (277)
180 1i1n_A Protein-L-isoaspartate 99.4 5.8E-13 2E-17 111.9 12.0 115 41-168 61-181 (226)
181 3gdh_A Trimethylguanosine synt 99.4 9.9E-15 3.4E-19 124.1 1.1 112 45-168 67-180 (241)
182 2pjd_A Ribosomal RNA small sub 99.4 2.1E-13 7.1E-18 122.5 9.6 113 43-168 184-302 (343)
183 3b3j_A Histone-arginine methyl 99.4 3.2E-13 1.1E-17 126.6 10.7 110 46-167 149-261 (480)
184 1r18_A Protein-L-isoaspartate( 99.4 3.7E-13 1.3E-17 113.5 9.9 116 40-168 67-193 (227)
185 1ixk_A Methyltransferase; open 99.4 7.7E-13 2.6E-17 117.5 12.4 113 46-168 109-245 (315)
186 3ajd_A Putative methyltransfer 99.4 3.6E-13 1.2E-17 117.3 10.0 114 47-168 75-210 (274)
187 1sui_A Caffeoyl-COA O-methyltr 99.4 5E-13 1.7E-17 114.7 10.8 109 52-169 76-190 (247)
188 2pbf_A Protein-L-isoaspartate 99.4 7.8E-13 2.7E-17 111.2 11.3 115 41-168 64-192 (227)
189 2avd_A Catechol-O-methyltransf 99.4 6.1E-13 2.1E-17 112.0 10.5 110 51-169 65-179 (229)
190 1o9g_A RRNA methyltransferase; 99.4 4E-13 1.4E-17 115.0 8.9 123 43-168 39-213 (250)
191 3bwc_A Spermidine synthase; SA 99.4 3.7E-13 1.3E-17 119.0 8.6 112 53-168 93-209 (304)
192 2h00_A Methyltransferase 10 do 99.4 1.4E-13 4.9E-18 117.9 5.7 107 55-168 65-191 (254)
193 2igt_A SAM dependent methyltra 99.4 8.4E-13 2.9E-17 118.2 10.9 115 46-168 143-271 (332)
194 2hnk_A SAM-dependent O-methylt 99.4 5.1E-13 1.8E-17 113.6 9.0 120 41-169 46-181 (239)
195 3fzg_A 16S rRNA methylase; met 99.4 1.5E-13 5E-18 112.8 5.0 115 40-168 36-151 (200)
196 3cbg_A O-methyltransferase; cy 99.4 5.1E-13 1.7E-17 113.3 8.2 109 52-169 69-182 (232)
197 3opn_A Putative hemolysin; str 99.4 2.3E-12 7.9E-17 109.6 12.3 111 42-168 23-136 (232)
198 2nxc_A L11 mtase, ribosomal pr 99.4 7.3E-13 2.5E-17 114.1 9.3 105 47-168 113-217 (254)
199 3adn_A Spermidine synthase; am 99.4 9.7E-13 3.3E-17 115.8 10.0 110 54-168 82-197 (294)
200 1zg3_A Isoflavanone 4'-O-methy 99.4 4E-13 1.4E-17 121.1 7.1 108 46-173 182-297 (358)
201 2wa2_A Non-structural protein 99.4 3.3E-13 1.1E-17 117.8 6.2 115 44-173 71-196 (276)
202 3lec_A NADB-rossmann superfami 99.4 2E-12 6.9E-17 109.6 10.3 106 53-168 19-124 (230)
203 2oxt_A Nucleoside-2'-O-methylt 99.4 5.1E-13 1.7E-17 115.9 6.7 112 43-168 62-184 (265)
204 2qm3_A Predicted methyltransfe 99.4 9.8E-12 3.3E-16 112.8 15.5 103 52-165 169-273 (373)
205 1zq9_A Probable dimethyladenos 99.4 3.3E-12 1.1E-16 111.9 11.8 115 40-167 13-145 (285)
206 3gnl_A Uncharacterized protein 99.4 2.8E-12 9.6E-17 109.6 10.3 106 53-168 19-124 (244)
207 1xj5_A Spermidine synthase 1; 99.4 1.1E-12 3.6E-17 117.6 8.0 111 52-168 117-234 (334)
208 3bzb_A Uncharacterized protein 99.4 5.3E-12 1.8E-16 110.2 12.2 117 47-168 71-204 (281)
209 3c3y_A Pfomt, O-methyltransfer 99.4 2.1E-12 7.2E-17 110.0 9.3 108 52-168 67-180 (237)
210 2p41_A Type II methyltransfera 99.3 1.9E-12 6.5E-17 114.5 8.8 107 45-168 72-190 (305)
211 3giw_A Protein of unknown func 99.3 6.3E-12 2.2E-16 109.1 11.7 118 43-168 65-199 (277)
212 2yxl_A PH0851 protein, 450AA l 99.3 9.3E-12 3.2E-16 115.7 13.5 113 46-168 250-388 (450)
213 1ne2_A Hypothetical protein TA 99.3 5.3E-12 1.8E-16 104.1 10.4 96 52-168 48-146 (200)
214 1af7_A Chemotaxis receptor met 99.3 2.3E-12 7.7E-17 112.3 8.4 113 55-168 105-251 (274)
215 3kr9_A SAM-dependent methyltra 99.3 5.4E-12 1.8E-16 106.7 10.4 105 53-168 13-118 (225)
216 2okc_A Type I restriction enzy 99.3 5.4E-12 1.8E-16 117.2 11.4 120 40-168 156-306 (445)
217 3tm4_A TRNA (guanine N2-)-meth 99.3 1.1E-11 3.7E-16 112.6 12.9 111 39-159 202-321 (373)
218 2xyq_A Putative 2'-O-methyl tr 99.3 8.4E-12 2.9E-16 109.4 11.5 128 14-168 14-170 (290)
219 1sqg_A SUN protein, FMU protei 99.3 1.7E-11 5.8E-16 113.3 13.9 115 43-168 234-373 (429)
220 3k6r_A Putative transferase PH 99.3 7.9E-12 2.7E-16 109.0 10.8 108 45-168 117-224 (278)
221 2o07_A Spermidine synthase; st 99.3 2.7E-12 9.2E-17 113.5 7.4 110 53-168 93-208 (304)
222 1mjf_A Spermidine synthase; sp 99.3 2.3E-12 7.8E-17 112.7 6.7 108 53-168 73-192 (281)
223 2as0_A Hypothetical protein PH 99.3 6.1E-12 2.1E-16 115.0 9.7 115 45-168 208-334 (396)
224 1iy9_A Spermidine synthase; ro 99.3 3.5E-12 1.2E-16 111.2 7.7 109 54-168 74-188 (275)
225 1uir_A Polyamine aminopropyltr 99.3 2.6E-12 8.9E-17 114.1 6.9 109 54-168 76-194 (314)
226 2b78_A Hypothetical protein SM 99.3 9.4E-12 3.2E-16 113.5 10.7 116 45-168 203-330 (385)
227 1inl_A Spermidine synthase; be 99.3 4.2E-12 1.4E-16 111.8 8.0 109 54-168 89-204 (296)
228 1wy7_A Hypothetical protein PH 99.3 3.4E-11 1.2E-15 99.6 13.1 102 49-167 43-147 (207)
229 2f8l_A Hypothetical protein LM 99.3 1.8E-11 6.2E-16 109.8 11.5 110 47-168 121-255 (344)
230 3gjy_A Spermidine synthase; AP 99.3 4.9E-12 1.7E-16 112.1 7.6 104 57-168 91-199 (317)
231 2pt6_A Spermidine synthase; tr 99.3 4.1E-12 1.4E-16 113.2 6.8 109 54-168 115-229 (321)
232 1qam_A ERMC' methyltransferase 99.3 1.4E-11 4.7E-16 105.5 9.8 92 39-144 14-105 (244)
233 2frx_A Hypothetical protein YE 99.3 2.5E-11 8.7E-16 113.5 12.4 112 47-168 107-245 (479)
234 3c0k_A UPF0064 protein YCCW; P 99.3 1.2E-11 4.2E-16 113.0 10.0 115 45-168 212-338 (396)
235 3m6w_A RRNA methylase; rRNA me 99.3 9.4E-12 3.2E-16 115.8 9.2 111 47-168 93-228 (464)
236 2i7c_A Spermidine synthase; tr 99.3 6.4E-12 2.2E-16 109.9 7.6 111 52-168 75-191 (283)
237 2ld4_A Anamorsin; methyltransf 99.3 6E-13 2.1E-17 107.6 0.7 90 49-168 6-100 (176)
238 2h1r_A Dimethyladenosine trans 99.3 1.5E-11 5E-16 108.5 9.6 93 40-146 27-119 (299)
239 2b2c_A Spermidine synthase; be 99.3 3.7E-12 1.3E-16 113.1 5.5 109 54-168 107-221 (314)
240 3gru_A Dimethyladenosine trans 99.2 7E-11 2.4E-15 103.9 13.1 93 39-145 34-126 (295)
241 1wxx_A TT1595, hypothetical pr 99.2 1E-11 3.6E-16 113.0 7.9 104 55-168 209-324 (382)
242 2yx1_A Hypothetical protein MJ 99.2 1.3E-11 4.3E-16 110.6 8.3 98 53-168 193-290 (336)
243 4dmg_A Putative uncharacterize 99.2 2.2E-11 7.4E-16 111.3 9.8 111 45-168 205-325 (393)
244 1yub_A Ermam, rRNA methyltrans 99.2 2.4E-12 8.1E-17 110.2 3.0 114 41-168 15-144 (245)
245 3m4x_A NOL1/NOP2/SUN family pr 99.2 2E-11 6.8E-16 113.4 9.0 112 47-168 97-233 (456)
246 2ih2_A Modification methylase 99.2 3.1E-11 1.1E-15 110.6 10.0 109 40-168 24-163 (421)
247 3v97_A Ribosomal RNA large sub 99.2 2E-11 6.7E-16 119.3 9.1 113 45-168 531-656 (703)
248 2cmg_A Spermidine synthase; tr 99.2 5.1E-12 1.7E-16 109.4 4.3 100 54-168 71-170 (262)
249 3fut_A Dimethyladenosine trans 99.2 9.5E-11 3.2E-15 101.9 11.4 106 25-145 14-122 (271)
250 3ftd_A Dimethyladenosine trans 99.2 1.1E-10 3.7E-15 100.3 10.2 91 40-144 16-106 (249)
251 1uwv_A 23S rRNA (uracil-5-)-me 99.2 2.4E-10 8.2E-15 105.7 12.6 111 43-168 274-388 (433)
252 3ldu_A Putative methylase; str 99.1 2.4E-10 8.2E-15 104.1 12.1 120 39-168 179-343 (385)
253 3k0b_A Predicted N6-adenine-sp 99.1 2.9E-10 9.9E-15 103.9 12.7 121 38-168 184-349 (393)
254 4azs_A Methyltransferase WBDD; 99.1 1.2E-11 4.1E-16 118.3 3.2 102 54-167 65-171 (569)
255 2jjq_A Uncharacterized RNA met 99.1 2.8E-10 9.6E-15 105.0 12.2 99 53-168 288-386 (425)
256 3ldg_A Putative uncharacterize 99.1 4.3E-10 1.5E-14 102.4 12.9 120 39-168 178-342 (384)
257 3uzu_A Ribosomal RNA small sub 99.1 2.3E-10 8E-15 99.8 9.9 91 40-142 27-123 (279)
258 3tqs_A Ribosomal RNA small sub 99.1 2.2E-10 7.7E-15 98.6 9.5 90 40-142 14-105 (255)
259 2ar0_A M.ecoki, type I restric 99.1 1.3E-10 4.5E-15 110.3 8.6 121 41-168 155-311 (541)
260 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.2E-09 4.1E-14 96.7 13.1 88 47-142 94-183 (309)
261 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.8E-10 9.5E-15 103.1 8.0 109 44-168 203-325 (369)
262 1m6y_A S-adenosyl-methyltransf 99.1 3.7E-10 1.3E-14 99.5 8.6 90 43-141 14-106 (301)
263 2dul_A N(2),N(2)-dimethylguano 99.0 5E-10 1.7E-14 101.8 8.5 102 55-168 47-163 (378)
264 1qyr_A KSGA, high level kasuga 99.0 4.3E-10 1.5E-14 96.7 7.5 93 41-145 7-102 (252)
265 3lkd_A Type I restriction-modi 99.0 2.8E-09 9.4E-14 101.1 12.1 123 39-168 201-357 (542)
266 3frh_A 16S rRNA methylase; met 99.0 9.5E-10 3.3E-14 93.3 8.0 100 54-168 104-205 (253)
267 2oyr_A UPF0341 protein YHIQ; a 99.0 2E-10 6.9E-15 99.0 3.8 113 46-163 77-194 (258)
268 2r6z_A UPF0341 protein in RSP 99.0 1.6E-10 5.5E-15 99.7 3.1 94 47-143 75-171 (258)
269 3lcv_B Sisomicin-gentamicin re 99.0 5.5E-10 1.9E-14 95.8 5.9 103 54-168 131-235 (281)
270 3v97_A Ribosomal RNA large sub 99.0 6.7E-09 2.3E-13 101.4 13.9 124 38-168 173-346 (703)
271 4gqb_A Protein arginine N-meth 98.9 4.9E-09 1.7E-13 100.6 11.9 101 55-166 357-464 (637)
272 3axs_A Probable N(2),N(2)-dime 98.9 1.4E-09 4.9E-14 99.0 7.0 104 54-168 51-157 (392)
273 3khk_A Type I restriction-modi 98.9 6.9E-10 2.4E-14 105.3 5.0 121 39-168 229-394 (544)
274 3evf_A RNA-directed RNA polyme 98.8 4.1E-09 1.4E-13 90.8 7.0 118 43-173 62-187 (277)
275 2qfm_A Spermine synthase; sper 98.8 4.8E-09 1.6E-13 94.2 7.6 110 55-168 188-313 (364)
276 3s1s_A Restriction endonucleas 98.7 5.7E-08 2E-12 94.8 10.9 113 53-168 319-464 (878)
277 3ua3_A Protein arginine N-meth 98.7 3.4E-08 1.2E-12 95.0 7.8 103 56-166 410-531 (745)
278 3ufb_A Type I restriction-modi 98.7 3.2E-07 1.1E-11 86.8 14.1 146 8-168 175-361 (530)
279 2k4m_A TR8_protein, UPF0146 pr 98.6 9.6E-08 3.3E-12 74.6 6.9 86 53-168 33-120 (153)
280 3ll7_A Putative methyltransfer 98.6 5.2E-08 1.8E-12 89.1 6.2 78 53-142 91-172 (410)
281 3gcz_A Polyprotein; flavivirus 98.6 4E-08 1.4E-12 84.7 4.8 115 43-172 78-203 (282)
282 3cvo_A Methyltransferase-like 98.5 3.9E-07 1.3E-11 75.5 9.8 110 45-168 21-153 (202)
283 2qy6_A UPF0209 protein YFCK; s 98.5 2.1E-07 7E-12 80.1 8.1 115 54-168 59-212 (257)
284 3b5i_A S-adenosyl-L-methionine 98.5 6.6E-07 2.2E-11 80.9 11.7 122 43-168 35-224 (374)
285 4auk_A Ribosomal RNA large sub 98.5 5.1E-07 1.7E-11 81.1 9.8 96 53-167 209-304 (375)
286 4fzv_A Putative methyltransfer 98.5 5.2E-07 1.8E-11 81.2 9.4 121 47-174 140-290 (359)
287 1wg8_A Predicted S-adenosylmet 98.5 4.5E-07 1.6E-11 78.5 8.5 83 44-140 11-96 (285)
288 3p8z_A Mtase, non-structural p 98.5 1.3E-06 4.4E-11 73.3 10.8 117 43-174 66-190 (267)
289 3lkz_A Non-structural protein 98.4 1.2E-06 4.1E-11 75.8 10.3 113 43-173 82-207 (321)
290 3o4f_A Spermidine synthase; am 98.4 1.4E-06 4.8E-11 76.1 9.7 111 54-168 82-197 (294)
291 3eld_A Methyltransferase; flav 98.2 6.1E-06 2.1E-10 71.6 9.3 116 43-172 69-193 (300)
292 2wk1_A NOVP; transferase, O-me 98.2 9.3E-06 3.2E-10 70.6 10.0 119 44-168 94-243 (282)
293 2px2_A Genome polyprotein [con 98.1 1.2E-05 4.1E-10 68.4 9.5 116 44-173 62-186 (269)
294 2efj_A 3,7-dimethylxanthine me 98.0 7.9E-06 2.7E-10 74.0 6.9 110 56-168 53-224 (384)
295 2zig_A TTHA0409, putative modi 98.0 1.1E-05 3.8E-10 70.5 7.0 54 40-96 221-274 (297)
296 3tka_A Ribosomal RNA small sub 97.9 3.1E-05 1.1E-09 68.6 7.5 86 44-141 46-136 (347)
297 3c6k_A Spermine synthase; sper 97.8 2.5E-05 8.5E-10 70.4 5.8 112 54-168 204-330 (381)
298 1i4w_A Mitochondrial replicati 97.8 4.5E-05 1.5E-09 68.3 7.3 77 39-126 36-118 (353)
299 1m6e_X S-adenosyl-L-methionnin 97.7 2.4E-05 8.4E-10 70.2 4.7 104 56-168 52-208 (359)
300 3r24_A NSP16, 2'-O-methyl tran 97.5 0.0011 3.9E-08 57.3 11.8 122 21-168 69-216 (344)
301 1g60_A Adenine-specific methyl 97.4 0.00028 9.6E-09 60.3 7.2 53 41-96 199-251 (260)
302 1f8f_A Benzyl alcohol dehydrog 97.1 0.0013 4.4E-08 58.9 8.0 103 47-168 182-288 (371)
303 2dph_A Formaldehyde dismutase; 97.0 0.0031 1E-07 57.0 9.3 107 47-168 177-298 (398)
304 3tos_A CALS11; methyltransfera 96.9 0.0039 1.3E-07 53.2 8.9 153 7-168 23-216 (257)
305 1kol_A Formaldehyde dehydrogen 96.8 0.0015 5.1E-08 59.0 5.5 106 48-168 178-299 (398)
306 3vyw_A MNMC2; tRNA wobble urid 96.7 0.0058 2E-07 53.4 8.5 114 54-168 95-225 (308)
307 1pl8_A Human sorbitol dehydrog 96.6 0.0048 1.6E-07 54.8 7.9 102 48-168 164-272 (356)
308 1pqw_A Polyketide synthase; ro 96.6 0.0032 1.1E-07 50.9 6.0 97 49-168 32-136 (198)
309 4ej6_A Putative zinc-binding d 96.6 0.006 2.1E-07 54.6 8.3 101 47-168 174-283 (370)
310 3two_A Mannitol dehydrogenase; 96.6 0.0045 1.5E-07 54.8 7.4 97 46-168 167-264 (348)
311 3s2e_A Zinc-containing alcohol 96.6 0.0063 2.1E-07 53.6 8.2 101 46-168 157-262 (340)
312 3g7u_A Cytosine-specific methy 96.4 0.011 3.9E-07 53.1 9.0 73 57-143 3-81 (376)
313 1cdo_A Alcohol dehydrogenase; 96.4 0.013 4.4E-07 52.3 9.3 101 47-168 184-293 (374)
314 3iht_A S-adenosyl-L-methionine 96.4 0.0074 2.5E-07 47.2 6.3 112 45-172 31-150 (174)
315 3uko_A Alcohol dehydrogenase c 96.4 0.014 4.8E-07 52.2 9.2 101 47-168 185-294 (378)
316 3gms_A Putative NADPH:quinone 96.3 0.013 4.5E-07 51.6 8.8 100 46-168 135-242 (340)
317 1p0f_A NADP-dependent alcohol 96.3 0.017 5.9E-07 51.4 9.4 103 47-168 183-292 (373)
318 2fzw_A Alcohol dehydrogenase c 96.3 0.016 5.4E-07 51.7 8.9 103 47-168 182-291 (373)
319 2jhf_A Alcohol dehydrogenase E 96.2 0.017 5.9E-07 51.5 9.1 103 47-168 183-292 (374)
320 1e3i_A Alcohol dehydrogenase, 96.2 0.02 6.9E-07 51.1 9.1 101 47-168 187-296 (376)
321 4b7c_A Probable oxidoreductase 96.1 0.0098 3.4E-07 52.2 6.7 101 46-168 140-247 (336)
322 3fpc_A NADP-dependent alcohol 96.1 0.0059 2E-07 54.1 5.3 103 47-168 158-265 (352)
323 1e3j_A NADP(H)-dependent ketos 96.1 0.021 7.2E-07 50.5 8.8 102 47-168 160-270 (352)
324 1rjd_A PPM1P, carboxy methyl t 96.0 0.075 2.6E-06 47.0 12.0 116 54-173 96-236 (334)
325 1v3u_A Leukotriene B4 12- hydr 96.0 0.014 4.8E-07 51.1 7.1 99 47-168 137-243 (333)
326 1g55_A DNA cytosine methyltran 96.0 0.0046 1.6E-07 55.0 3.9 72 57-142 3-77 (343)
327 2hcy_A Alcohol dehydrogenase 1 96.0 0.018 6E-07 50.9 7.7 100 47-168 161-268 (347)
328 1uuf_A YAHK, zinc-type alcohol 95.9 0.0099 3.4E-07 53.2 5.7 100 47-168 186-287 (369)
329 3goh_A Alcohol dehydrogenase, 95.9 0.013 4.5E-07 50.9 6.3 94 47-168 134-228 (315)
330 2py6_A Methyltransferase FKBM; 95.9 0.023 7.9E-07 51.6 8.1 68 52-124 223-293 (409)
331 3m6i_A L-arabinitol 4-dehydrog 95.8 0.032 1.1E-06 49.5 8.9 105 47-168 171-282 (363)
332 1boo_A Protein (N-4 cytosine-s 95.7 0.016 5.6E-07 50.9 6.3 53 41-96 239-291 (323)
333 2b5w_A Glucose dehydrogenase; 95.7 0.023 8E-07 50.3 7.2 99 48-168 159-272 (357)
334 3uog_A Alcohol dehydrogenase; 95.6 0.016 5.6E-07 51.5 5.9 99 49-168 183-286 (363)
335 1rjw_A ADH-HT, alcohol dehydro 95.5 0.052 1.8E-06 47.7 8.9 100 47-168 156-260 (339)
336 1eg2_A Modification methylase 95.5 0.037 1.3E-06 48.6 7.8 56 38-96 226-284 (319)
337 2c7p_A Modification methylase 95.5 0.022 7.5E-07 50.2 6.3 70 56-142 11-80 (327)
338 3ubt_Y Modification methylase 95.4 0.037 1.3E-06 48.4 7.6 69 57-141 1-69 (331)
339 2j3h_A NADP-dependent oxidored 95.4 0.031 1.1E-06 49.1 7.0 100 47-168 147-254 (345)
340 4eye_A Probable oxidoreductase 95.3 0.029 9.9E-07 49.4 6.6 98 49-168 153-256 (342)
341 2vz8_A Fatty acid synthase; tr 95.2 0.012 4E-07 64.9 4.4 103 54-169 1239-1348(2512)
342 1yb5_A Quinone oxidoreductase; 95.1 0.042 1.4E-06 48.6 7.0 97 49-168 164-268 (351)
343 3jv7_A ADH-A; dehydrogenase, n 95.1 0.053 1.8E-06 47.6 7.6 97 52-168 168-269 (345)
344 2d8a_A PH0655, probable L-thre 95.1 0.043 1.5E-06 48.4 6.9 99 48-168 161-266 (348)
345 4a2c_A Galactitol-1-phosphate 95.0 0.18 6.3E-06 44.0 10.9 103 46-168 151-259 (346)
346 1iz0_A Quinone oxidoreductase; 95.0 0.036 1.2E-06 47.8 6.1 94 50-168 121-217 (302)
347 2oo3_A Protein involved in cat 95.0 0.0024 8.1E-08 55.2 -1.5 100 56-167 92-196 (283)
348 1vj0_A Alcohol dehydrogenase, 94.9 0.028 9.7E-07 50.3 5.4 103 47-168 186-297 (380)
349 3ip1_A Alcohol dehydrogenase, 94.9 0.086 2.9E-06 47.5 8.6 39 52-90 210-249 (404)
350 3fwz_A Inner membrane protein 94.9 0.11 3.6E-06 39.5 7.9 93 56-168 7-104 (140)
351 2c0c_A Zinc binding alcohol de 94.9 0.075 2.6E-06 47.1 8.0 101 47-168 155-260 (362)
352 3jyn_A Quinone oxidoreductase; 94.9 0.035 1.2E-06 48.4 5.7 97 49-168 134-238 (325)
353 4eez_A Alcohol dehydrogenase 1 94.8 0.12 4.2E-06 45.2 9.2 101 47-168 155-262 (348)
354 1jvb_A NAD(H)-dependent alcoho 94.7 0.065 2.2E-06 47.2 7.1 100 47-168 162-270 (347)
355 1qor_A Quinone oxidoreductase; 94.7 0.039 1.3E-06 48.1 5.5 96 50-168 135-238 (327)
356 2h6e_A ADH-4, D-arabinose 1-de 94.5 0.041 1.4E-06 48.4 5.2 93 52-168 168-268 (344)
357 2zb4_A Prostaglandin reductase 94.4 0.099 3.4E-06 46.1 7.6 101 47-168 150-259 (357)
358 4dup_A Quinone oxidoreductase; 94.4 0.04 1.4E-06 48.7 5.0 97 49-168 161-264 (353)
359 2eih_A Alcohol dehydrogenase; 94.4 0.038 1.3E-06 48.6 4.7 95 51-168 162-264 (343)
360 2cdc_A Glucose dehydrogenase g 94.4 0.07 2.4E-06 47.3 6.5 94 50-168 166-277 (366)
361 3qwb_A Probable quinone oxidor 94.1 0.097 3.3E-06 45.7 6.8 98 50-168 143-246 (334)
362 2j8z_A Quinone oxidoreductase; 94.1 0.05 1.7E-06 48.1 4.9 97 49-168 156-260 (354)
363 1wly_A CAAR, 2-haloacrylate re 94.1 0.096 3.3E-06 45.7 6.7 97 49-168 139-243 (333)
364 1xa0_A Putative NADPH dependen 94.0 0.058 2E-06 47.0 5.2 98 49-168 142-245 (328)
365 3tqh_A Quinone oxidoreductase; 94.0 0.19 6.4E-06 43.7 8.4 98 47-168 144-244 (321)
366 3nx4_A Putative oxidoreductase 93.8 0.13 4.6E-06 44.5 7.0 98 49-168 139-240 (324)
367 2dq4_A L-threonine 3-dehydroge 93.8 0.058 2E-06 47.4 4.7 96 50-168 160-261 (343)
368 2qrv_A DNA (cytosine-5)-methyl 93.7 0.1 3.4E-06 45.3 6.0 75 53-141 13-91 (295)
369 1tt7_A YHFP; alcohol dehydroge 93.7 0.085 2.9E-06 46.0 5.6 98 49-168 143-246 (330)
370 4h0n_A DNMT2; SAH binding, tra 93.5 0.07 2.4E-06 47.1 4.7 72 57-142 4-78 (333)
371 3c85_A Putative glutathione-re 93.4 0.24 8.3E-06 39.1 7.4 93 56-168 39-138 (183)
372 2g1u_A Hypothetical protein TM 93.3 0.33 1.1E-05 37.2 7.9 97 54-168 17-117 (155)
373 3qv2_A 5-cytosine DNA methyltr 93.2 0.089 3.1E-06 46.3 4.8 72 56-142 10-85 (327)
374 3fbg_A Putative arginate lyase 93.2 0.098 3.3E-06 46.0 5.1 100 47-168 136-247 (346)
375 4dvj_A Putative zinc-dependent 92.9 0.18 6.1E-06 44.7 6.5 100 48-168 159-269 (363)
376 1zsy_A Mitochondrial 2-enoyl t 92.6 0.86 3E-05 40.0 10.6 41 49-89 161-203 (357)
377 3pvc_A TRNA 5-methylaminomethy 92.5 0.29 9.9E-06 47.2 7.8 114 55-168 58-210 (689)
378 3krt_A Crotonyl COA reductase; 92.4 0.27 9.1E-06 45.0 7.1 39 51-90 224-264 (456)
379 3gaz_A Alcohol dehydrogenase s 92.4 0.08 2.7E-06 46.6 3.4 96 49-168 144-245 (343)
380 3llv_A Exopolyphosphatase-rela 91.5 0.48 1.6E-05 35.5 6.6 91 56-167 6-101 (141)
381 3l9w_A Glutathione-regulated p 91.2 0.33 1.1E-05 44.0 6.3 93 56-168 4-101 (413)
382 2uyo_A Hypothetical protein ML 91.2 1.1 3.7E-05 39.0 9.2 103 57-168 104-217 (310)
383 1piw_A Hypothetical zinc-type 91.0 0.41 1.4E-05 42.2 6.6 102 47-168 171-275 (360)
384 3ps9_A TRNA 5-methylaminomethy 90.8 0.67 2.3E-05 44.5 8.3 114 55-168 66-218 (676)
385 2zig_A TTHA0409, putative modi 90.6 0.14 4.8E-06 44.2 3.0 54 113-168 20-96 (297)
386 2vn8_A Reticulon-4-interacting 90.6 0.63 2.2E-05 41.2 7.4 94 53-168 181-279 (375)
387 4a27_A Synaptic vesicle membra 89.8 0.41 1.4E-05 42.0 5.4 99 47-168 134-237 (349)
388 1lss_A TRK system potassium up 89.8 1.8 6.2E-05 31.7 8.4 92 56-166 4-100 (140)
389 1boo_A Protein (N-4 cytosine-s 89.5 0.19 6.5E-06 44.0 2.9 54 113-168 13-83 (323)
390 4a0s_A Octenoyl-COA reductase/ 89.3 0.64 2.2E-05 42.2 6.5 39 51-90 216-256 (447)
391 3me5_A Cytosine-specific methy 88.8 0.28 9.6E-06 45.5 3.7 60 56-126 88-147 (482)
392 3gqv_A Enoyl reductase; medium 88.8 2.6 8.9E-05 37.2 9.9 94 54-168 163-262 (371)
393 1id1_A Putative potassium chan 88.4 2.5 8.4E-05 32.0 8.4 97 56-168 3-104 (153)
394 1zkd_A DUF185; NESG, RPR58, st 88.3 0.58 2E-05 42.1 5.3 43 48-90 73-122 (387)
395 3pi7_A NADH oxidoreductase; gr 87.8 1 3.5E-05 39.3 6.6 99 46-168 155-262 (349)
396 3ius_A Uncharacterized conserv 87.5 5 0.00017 33.3 10.6 89 57-167 6-100 (286)
397 4dio_A NAD(P) transhydrogenase 87.1 0.41 1.4E-05 43.3 3.6 35 55-90 189-224 (405)
398 1gu7_A Enoyl-[acyl-carrier-pro 86.8 2.9 9.9E-05 36.5 9.0 39 51-90 162-203 (364)
399 4f3n_A Uncharacterized ACR, CO 86.0 1.1 3.8E-05 40.8 5.8 38 56-93 138-180 (432)
400 3l4b_C TRKA K+ channel protien 86.0 2.1 7.3E-05 34.5 7.2 92 58-168 2-98 (218)
401 3ce6_A Adenosylhomocysteinase; 85.6 0.99 3.4E-05 41.9 5.4 88 53-168 271-360 (494)
402 2cf5_A Atccad5, CAD, cinnamyl 84.7 1.8 6.2E-05 37.9 6.6 101 47-168 171-274 (357)
403 1zcj_A Peroxisomal bifunctiona 84.4 3.3 0.00011 37.9 8.3 99 56-168 37-149 (463)
404 3iei_A Leucine carboxyl methyl 84.2 13 0.00046 32.4 11.9 116 55-174 90-234 (334)
405 2eez_A Alanine dehydrogenase; 84.2 0.55 1.9E-05 41.7 2.9 98 55-168 165-265 (369)
406 2aef_A Calcium-gated potassium 83.9 6.6 0.00023 31.8 9.4 95 54-168 7-104 (234)
407 1wma_A Carbonyl reductase [NAD 83.3 7.6 0.00026 31.8 9.6 77 55-142 3-91 (276)
408 3p2y_A Alanine dehydrogenase/p 82.9 0.57 1.9E-05 42.1 2.4 35 55-90 183-218 (381)
409 2vhw_A Alanine dehydrogenase; 82.3 0.46 1.6E-05 42.5 1.6 99 55-168 167-267 (377)
410 3r3s_A Oxidoreductase; structu 82.2 12 0.0004 31.6 10.6 105 55-168 48-184 (294)
411 4dcm_A Ribosomal RNA large sub 82.1 7.6 0.00026 34.4 9.6 105 46-168 28-135 (375)
412 1x13_A NAD(P) transhydrogenase 82.0 1 3.5E-05 40.6 3.8 35 55-90 171-206 (401)
413 1lnq_A MTHK channels, potassiu 81.9 3.2 0.00011 35.9 7.0 92 56-168 115-210 (336)
414 1yqd_A Sinapyl alcohol dehydro 81.9 2.6 8.8E-05 37.1 6.4 102 46-168 177-281 (366)
415 1l7d_A Nicotinamide nucleotide 81.8 1.5 5.1E-05 39.1 4.8 35 55-90 171-206 (384)
416 1g60_A Adenine-specific methyl 80.9 0.57 2E-05 39.4 1.6 52 115-168 5-73 (260)
417 3h2s_A Putative NADH-flavin re 80.6 5.2 0.00018 31.8 7.4 94 57-168 1-103 (224)
418 3ijr_A Oxidoreductase, short c 80.6 20 0.00068 30.1 11.4 104 55-168 46-181 (291)
419 2dpo_A L-gulonate 3-dehydrogen 79.6 14 0.00046 32.0 10.1 101 57-168 7-122 (319)
420 1eg2_A Modification methylase 79.3 0.88 3E-05 39.7 2.3 53 114-168 38-105 (319)
421 4e12_A Diketoreductase; oxidor 78.9 4.5 0.00016 34.1 6.7 103 57-168 5-120 (283)
422 4eso_A Putative oxidoreductase 78.3 12 0.0004 30.8 9.0 74 55-142 7-91 (255)
423 3gvp_A Adenosylhomocysteinase 78.0 1.1 3.9E-05 40.7 2.7 94 47-168 210-306 (435)
424 1h2b_A Alcohol dehydrogenase; 77.9 3.3 0.00011 36.3 5.7 39 51-90 182-222 (359)
425 3k6j_A Protein F01G10.3, confi 77.5 2.8 9.7E-05 38.5 5.2 101 56-168 54-165 (460)
426 1pjc_A Protein (L-alanine dehy 77.4 1.5 5.2E-05 38.7 3.4 34 56-90 167-201 (361)
427 1xhl_A Short-chain dehydrogena 77.4 12 0.00041 31.6 9.0 80 55-142 25-115 (297)
428 1xg5_A ARPG836; short chain de 77.2 28 0.00097 28.7 11.3 63 55-126 31-96 (279)
429 3k31_A Enoyl-(acyl-carrier-pro 76.9 14 0.00048 31.1 9.4 77 55-142 29-117 (296)
430 3gvx_A Glycerate dehydrogenase 76.6 2 6.9E-05 36.9 3.8 86 55-168 121-208 (290)
431 2hmt_A YUAA protein; RCK, KTN, 76.4 5.3 0.00018 29.2 5.8 92 56-167 6-102 (144)
432 3pp8_A Glyoxylate/hydroxypyruv 76.2 2.6 8.9E-05 36.6 4.4 89 55-168 138-228 (315)
433 3pxx_A Carveol dehydrogenase; 75.9 30 0.001 28.5 11.1 105 55-168 9-152 (287)
434 3is3_A 17BETA-hydroxysteroid d 75.5 33 0.0011 28.2 11.2 104 55-168 17-151 (270)
435 4a7p_A UDP-glucose dehydrogena 75.5 8.9 0.00031 34.9 8.0 26 148-173 108-133 (446)
436 3ic5_A Putative saccharopine d 75.4 5.3 0.00018 28.0 5.4 70 55-141 4-77 (118)
437 3oig_A Enoyl-[acyl-carrier-pro 75.0 24 0.00084 28.8 10.2 63 55-126 6-72 (266)
438 3mog_A Probable 3-hydroxybutyr 74.7 8.9 0.00031 35.3 7.9 97 57-167 6-118 (483)
439 2gn4_A FLAA1 protein, UDP-GLCN 74.2 9.9 0.00034 32.8 7.8 76 55-142 20-100 (344)
440 3ggo_A Prephenate dehydrogenas 74.0 8.9 0.0003 33.0 7.3 92 57-168 34-127 (314)
441 1xgk_A Nitrogen metabolite rep 74.0 15 0.00051 31.9 8.9 99 56-168 5-111 (352)
442 3ojo_A CAP5O; rossmann fold, c 73.5 14 0.00047 33.5 8.7 105 55-173 10-133 (431)
443 2rir_A Dipicolinate synthase, 73.3 12 0.00042 31.7 8.0 87 55-168 156-245 (300)
444 3d4o_A Dipicolinate synthase s 73.1 12 0.0004 31.8 7.8 95 47-168 145-243 (293)
445 2jl1_A Triphenylmethane reduct 73.1 8.9 0.00031 31.7 7.0 68 58-142 2-75 (287)
446 3n58_A Adenosylhomocysteinase; 72.3 6.5 0.00022 36.0 6.1 94 47-168 237-333 (464)
447 1f0y_A HCDH, L-3-hydroxyacyl-C 72.3 14 0.00048 31.2 8.1 32 57-90 16-49 (302)
448 1wwk_A Phosphoglycerate dehydr 72.2 4 0.00014 35.2 4.6 87 55-168 141-231 (307)
449 1zk4_A R-specific alcohol dehy 71.3 29 0.00098 27.9 9.6 60 55-126 5-67 (251)
450 2wyu_A Enoyl-[acyl carrier pro 70.8 18 0.00061 29.7 8.3 77 55-142 7-95 (261)
451 3jtm_A Formate dehydrogenase, 70.7 4.4 0.00015 35.8 4.6 89 55-168 163-255 (351)
452 2g76_A 3-PGDH, D-3-phosphoglyc 70.1 6.6 0.00023 34.3 5.6 87 55-168 164-254 (335)
453 1fmc_A 7 alpha-hydroxysteroid 69.3 13 0.00046 30.0 7.1 77 55-142 10-97 (255)
454 3awd_A GOX2181, putative polyo 68.3 18 0.00062 29.3 7.8 61 55-126 12-75 (260)
455 3afn_B Carbonyl reductase; alp 67.9 25 0.00085 28.3 8.6 77 55-142 6-94 (258)
456 2vz8_A Fatty acid synthase; tr 67.9 4.3 0.00015 45.1 4.6 100 49-168 1661-1769(2512)
457 4ft4_B DNA (cytosine-5)-methyl 67.9 4.6 0.00016 39.4 4.5 57 55-124 211-272 (784)
458 3slg_A PBGP3 protein; structur 67.8 20 0.00069 30.8 8.3 71 56-142 24-100 (372)
459 2zcu_A Uncharacterized oxidore 67.6 8.8 0.0003 31.6 5.7 66 59-141 2-73 (286)
460 3dqp_A Oxidoreductase YLBE; al 67.5 22 0.00076 28.0 8.0 67 57-142 1-72 (219)
461 2f1k_A Prephenate dehydrogenas 67.2 13 0.00046 30.8 6.8 88 58-168 2-90 (279)
462 3ew7_A LMO0794 protein; Q8Y8U8 67.2 20 0.00069 28.0 7.6 93 57-168 1-101 (221)
463 3gg2_A Sugar dehydrogenase, UD 66.8 27 0.00093 31.6 9.2 105 57-171 3-124 (450)
464 3e8x_A Putative NAD-dependent 66.8 19 0.00064 28.8 7.5 70 55-142 20-93 (236)
465 3ruf_A WBGU; rossmann fold, UD 66.3 21 0.00073 30.3 8.1 81 55-142 24-109 (351)
466 2y0c_A BCEC, UDP-glucose dehyd 66.2 17 0.00057 33.4 7.7 35 55-90 7-42 (478)
467 1gee_A Glucose 1-dehydrogenase 66.1 31 0.001 27.9 8.8 61 55-126 6-70 (261)
468 3swr_A DNA (cytosine-5)-methyl 66.1 6 0.0002 39.9 4.9 35 55-90 539-574 (1002)
469 1qsg_A Enoyl-[acyl-carrier-pro 65.9 28 0.00095 28.5 8.5 77 55-142 8-96 (265)
470 3evt_A Phosphoglycerate dehydr 65.6 6.2 0.00021 34.3 4.5 89 55-168 136-226 (324)
471 2p91_A Enoyl-[acyl-carrier-pro 65.5 34 0.0011 28.4 9.1 77 55-142 20-108 (285)
472 3ek2_A Enoyl-(acyl-carrier-pro 65.5 27 0.00091 28.5 8.3 79 53-142 11-101 (271)
473 3h9u_A Adenosylhomocysteinase; 65.4 2.7 9.1E-05 38.3 2.1 44 46-90 200-245 (436)
474 2h7i_A Enoyl-[acyl-carrier-pro 65.4 21 0.00071 29.4 7.6 60 55-126 6-69 (269)
475 4g65_A TRK system potassium up 65.2 8.7 0.0003 35.1 5.6 68 56-139 3-74 (461)
476 3edm_A Short chain dehydrogena 65.1 37 0.0013 27.7 9.1 76 55-141 7-94 (259)
477 3v2g_A 3-oxoacyl-[acyl-carrier 64.9 58 0.002 26.8 12.5 111 47-168 23-164 (271)
478 3ado_A Lambda-crystallin; L-gu 64.7 59 0.002 28.0 10.6 103 56-168 6-122 (319)
479 3sx2_A Putative 3-ketoacyl-(ac 64.5 57 0.0019 26.7 10.3 79 55-142 12-111 (278)
480 3d1l_A Putative NADP oxidoredu 64.2 21 0.00073 29.3 7.5 91 56-168 10-101 (266)
481 3mag_A VP39; methylated adenin 63.9 8.6 0.00029 33.1 4.8 99 52-166 57-174 (307)
482 2pd4_A Enoyl-[acyl-carrier-pro 63.3 28 0.00095 28.7 8.1 77 55-142 5-93 (275)
483 4id9_A Short-chain dehydrogena 63.2 30 0.001 29.3 8.4 66 54-142 17-86 (347)
484 2gdz_A NAD+-dependent 15-hydro 62.9 39 0.0013 27.6 8.9 80 55-143 6-96 (267)
485 3hg7_A D-isomer specific 2-hyd 62.9 1.4 4.9E-05 38.5 -0.2 35 55-90 139-174 (324)
486 2ekl_A D-3-phosphoglycerate de 62.7 7.1 0.00024 33.7 4.3 87 55-168 141-231 (313)
487 2gcg_A Glyoxylate reductase/hy 62.2 5.4 0.00019 34.7 3.4 88 55-168 154-245 (330)
488 2wtb_A MFP2, fatty acid multif 62.1 30 0.001 33.5 8.9 100 57-168 313-426 (725)
489 3ksu_A 3-oxoacyl-acyl carrier 62.0 64 0.0022 26.3 10.6 79 55-142 10-100 (262)
490 2yq5_A D-isomer specific 2-hyd 61.9 6 0.00021 34.8 3.7 87 55-168 147-235 (343)
491 4dgs_A Dehydrogenase; structur 61.7 13 0.00046 32.5 5.9 86 55-168 170-257 (340)
492 4e5n_A Thermostable phosphite 61.5 5.1 0.00018 34.9 3.1 88 55-168 144-235 (330)
493 4dkj_A Cytosine-specific methy 61.0 7.1 0.00024 35.1 4.1 33 57-90 11-49 (403)
494 3grk_A Enoyl-(acyl-carrier-pro 60.7 41 0.0014 28.1 8.7 79 53-142 28-118 (293)
495 2ew2_A 2-dehydropantoate 2-red 60.7 33 0.0011 28.6 8.1 34 133-168 74-107 (316)
496 4hy3_A Phosphoglycerate oxidor 60.7 8.5 0.00029 34.1 4.4 87 55-168 175-265 (365)
497 2g5c_A Prephenate dehydrogenas 60.6 20 0.00069 29.7 6.7 89 58-167 3-94 (281)
498 2pi1_A D-lactate dehydrogenase 60.6 6 0.0002 34.6 3.4 88 55-168 140-229 (334)
499 2nac_A NAD-dependent formate d 60.4 9.7 0.00033 34.1 4.8 89 55-168 190-282 (393)
500 2hwk_A Helicase NSP2; rossman 60.2 5.6 0.00019 34.2 3.0 47 119-168 195-253 (320)
No 1
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=100.00 E-value=1.4e-35 Score=269.79 Aligned_cols=189 Identities=70% Similarity=1.182 Sum_probs=166.7
Q ss_pred CchHHHHHHHHHHHHhhcCCccccccCCCCCCCCcccCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcE
Q psy17227 2 PSRGLLRHIIQQTYNQSVTEPEKLNVYQPFSPFVYGETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKI 81 (268)
Q Consensus 2 ~~~~~~~~~~~~~y~~~~~~~~~~~~y~~~~~~~~g~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~ 81 (268)
||++++++|+.++|.+.+++++.|++|.+|++.+||++.+..+..+++.+++.++++|||||||+|.+++.+|...++.+
T Consensus 120 ~~~~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~k 199 (438)
T 3uwp_A 120 PSTGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKH 199 (438)
T ss_dssp CCHHHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSE
T ss_pred CCHHHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998888878
Q ss_pred EEEEeCCCChhHHHH-HHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCC
Q psy17227 82 CWGVEKADLPAKYAE-MHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLK 160 (268)
Q Consensus 82 v~GiD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~Lk 160 (268)
|+|||+|+.++.+|+ +.+.++++++..|....+++|++||+.++|+.+....+|+|++|+++|++++...|.+++|+||
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK 279 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK 279 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCC
Confidence 999999999888887 3344444455566544689999999999998654346789999999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCcccccccccCCCCCC
Q psy17227 161 DGARIVSSKSFCPLNFRITDRNLTDGGKKV 190 (268)
Q Consensus 161 pGG~~i~~~~~~~~~~~~~~~~~~~i~~~l 190 (268)
|||+||+++.++|.++.++..++.++...+
T Consensus 280 PGGrIVssE~f~p~d~~i~~rnl~di~~il 309 (438)
T 3uwp_A 280 EGGRIVSSKPFAPLNFRINSRNLSDIGTIM 309 (438)
T ss_dssp TTCEEEESSCSSCTTCCCCSSSTTSGGGSE
T ss_pred CCcEEEEeecccCCCCCCCcccccChhhhh
Confidence 999999999999998888777776665444
No 2
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.92 E-value=2.2e-24 Score=199.13 Aligned_cols=182 Identities=29% Similarity=0.518 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHhhc-CCccccccCCCCCCCCcccCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEE
Q psy17227 4 RGLLRHIIQQTYNQSV-TEPEKLNVYQPFSPFVYGETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKIC 82 (268)
Q Consensus 4 ~~~~~~~~~~~y~~~~-~~~~~~~~y~~~~~~~~g~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v 82 (268)
|.+++.++.++|...+ ++++.+++|..|++..||++.+..+..+++.+++.++++|||||||+|.+++.+|+..|+.+|
T Consensus 190 r~~~e~il~~aY~~~l~P~~~~l~~Y~~~s~~~yGet~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V 269 (433)
T 1u2z_A 190 RSFIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALS 269 (433)
T ss_dssp HHHHHHHHHHHHHHHTGGGGGGGCSCCSSGGGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHhhhccccccccccHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEE
Confidence 5668999999999876 578999999999999999999999999999999999999999999999999999998888779
Q ss_pred EEEeCCCChhHHHH-HHHHHHHHHHHhccccccEEEEEcCCCCC--cccccccceEEEEEeccccCcCHHHHHHHHHhcC
Q psy17227 83 WGVEKADLPAKYAE-MHTVFKRWMQWYGKRHGEFRLVKGDFLTE--EHREKITQASIVFVNNFAFGPTVDHALKERFQDL 159 (268)
Q Consensus 83 ~GiD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~i~~~~gD~~~l--~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~L 159 (268)
+|||+|+.++..|+ |.+.+++.+...|....+++++++|.... ++......+|+|+++++++.+++...+.+++++|
T Consensus 270 ~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~L 349 (433)
T 1u2z_A 270 FGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTA 349 (433)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred EEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhC
Confidence 99999998877774 56666665656664335899999865432 2311113467888887777788999999999999
Q ss_pred CCCcEEEEeCCCCCCCcccccccccC
Q psy17227 160 KDGARIVSSKSFCPLNFRITDRNLTD 185 (268)
Q Consensus 160 kpGG~~i~~~~~~~~~~~~~~~~~~~ 185 (268)
||||++++.++++|.++.++...+..
T Consensus 350 KpGG~lVi~d~f~p~~~~i~~~~l~~ 375 (433)
T 1u2z_A 350 KVGCKIISLKSLRSLTYQINFYNVEN 375 (433)
T ss_dssp CTTCEEEESSCSSCTTCCCCSSSTTC
T ss_pred CCCeEEEEeeccCCcccccccccccc
Confidence 99999999999988876655444433
No 3
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.80 E-value=2.5e-19 Score=157.30 Aligned_cols=121 Identities=15% Similarity=0.159 Sum_probs=95.5
Q ss_pred HHHHHHHHHHc----CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEE
Q psy17227 41 FDLISRMIDQI----NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFR 116 (268)
Q Consensus 41 ~~~~~~ll~~l----~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 116 (268)
...+..++..+ ++.++.+|||||||+|.++..+++.+++. |+|+|+|+.++..++ +++. ..+. ..+++
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~~~ 135 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVS-IDCLNIAPVQNKRNE--EYNN----QAGL-ADNIT 135 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCE-EEEEESCHHHHHHHH--HHHH----HHTC-TTTEE
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCE-EEEEeCCHHHHHHHH--HHHH----hcCC-CcceE
Confidence 34556788888 88999999999999999999999887775 999999997554443 3222 2343 25799
Q ss_pred EEEcCCCCCcccccccceEEEEEe-ccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 117 LVKGDFLTEEHREKITQASIVFVN-NFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 117 ~~~gD~~~l~~~~~~~d~dvv~~~-~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
++++|+.++|++++.+ |+|++. .+.|.+++...++++.++|||||++++.++.
T Consensus 136 ~~~~d~~~~~~~~~~f--D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 136 VKYGSFLEIPCEDNSY--DFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEECCTTSCSSCTTCE--EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEcCcccCCCCCCCE--eEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 9999999999876544 566655 4578899999999999999999999987543
No 4
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.79 E-value=7.6e-19 Score=150.60 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=99.0
Q ss_pred CcccCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccccc
Q psy17227 35 VYGETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGE 114 (268)
Q Consensus 35 ~~g~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 114 (268)
..++.....+..+++.+++.++.+|||||||+|.++..+++..+.. |+|+|+|+.++..++ +++. ..+. ..+
T Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~-v~gvD~s~~~l~~a~--~~~~----~~~~-~~~ 87 (256)
T 1nkv_A 16 IHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGIT-GTGIDMSSLFTAQAK--RRAE----ELGV-SER 87 (256)
T ss_dssp SSSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCE-EEEEESCHHHHHHHH--HHHH----HTTC-TTT
T ss_pred ccCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCe-EEEEeCCHHHHHHHH--HHHH----hcCC-Ccc
Confidence 3445667788899999999999999999999999999999887765 999999997554443 3332 2343 248
Q ss_pred EEEEEcCCCCCcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 115 FRLVKGDFLTEEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 115 i~~~~gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
++++++|+.++++ ++. +|+|++... .|.+++...++++.++|||||++++.++
T Consensus 88 v~~~~~d~~~~~~-~~~--fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 88 VHFIHNDAAGYVA-NEK--CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEEESCCTTCCC-SSC--EEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred eEEEECChHhCCc-CCC--CCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 9999999999887 443 566766544 5778899999999999999999998754
No 5
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.77 E-value=1.3e-18 Score=150.91 Aligned_cols=111 Identities=20% Similarity=0.234 Sum_probs=83.2
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCC--cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGC--KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE 129 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~--~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~ 129 (268)
.+++|.+|||||||+|..+..+++..+. .+|+|||+|+.|+..|+ +++. ..+. ..+++|+++|+.++|++
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~--~~~~----~~~~-~~~v~~~~~D~~~~~~~- 138 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCR--RHID----AYKA-PTPVDVIEGDIRDIAIE- 138 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHH--HHHH----TSCC-SSCEEEEESCTTTCCCC-
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH--HHHH----hhcc-CceEEEeeccccccccc-
Confidence 3789999999999999999999987532 25999999998555443 3332 2332 35899999999998864
Q ss_pred cccceEEEEEeccc-cCc--CHHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 130 KITQASIVFVNNFA-FGP--TVDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 130 ~~~d~dvv~~~~~~-~~~--~~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
++|+|+++.++ |.+ +....+++++|+|||||+|++++...+
T Consensus 139 ---~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 139 ---NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp ---SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred ---ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 35677776554 433 345679999999999999999865544
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.76 E-value=4e-18 Score=147.58 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=93.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.....+++.+++.++.+|||||||+|.++..+++..++. |+|+|+|+.++..++ +++. ..+. ..+++++++|
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~~~~~~~d 119 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVR-VTGISISRPQVNQAN--ARAT----AAGL-ANRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCE-EEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEECC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCE-EEEEeCCHHHHHHHH--HHHH----hcCC-CcceEEEECc
Confidence 345568888899999999999999999999999877665 999999997544443 3322 2333 2479999999
Q ss_pred CCCCcccccccceEEEEEe-ccccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 122 FLTEEHREKITQASIVFVN-NFAFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~-~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+.++|++++. +|+|++. .+.|.++....++++.++|||||++++.+.
T Consensus 120 ~~~~~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 120 AMDLPFEDAS--FDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp TTSCCSCTTC--EEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCCCCCC--ccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999887654 4566655 456778999999999999999999998743
No 7
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.76 E-value=2.3e-18 Score=143.64 Aligned_cols=115 Identities=12% Similarity=0.069 Sum_probs=84.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHh------c----cc
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWY------G----KR 111 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~------~----~~ 111 (268)
+.+.+++..+++.++.+|||+|||+|..+..+|+. |.. |+|||+|+.|+..|+ ++.. .. + ..
T Consensus 9 ~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~-V~gvD~S~~~l~~a~--~~~~----~~~~~~~~~~~~~~~ 80 (203)
T 1pjz_A 9 KDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYH-VVGAELSEAAVERYF--TERG----EQPHITSQGDFKVYA 80 (203)
T ss_dssp HHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCE-EEEEEECHHHHHHHH--HHHC----SCSEEEEETTEEEEE
T ss_pred HHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCe-EEEEeCCHHHHHHHH--HHcc----CCccccccccccccc
Confidence 45667788888889999999999999999999886 765 999999998655543 2111 00 0 01
Q ss_pred cccEEEEEcCCCCCcccc-cccceEEEEEecc-ccCc--CHHHHHHHHHhcCCCCcEEE
Q psy17227 112 HGEFRLVKGDFLTEEHRE-KITQASIVFVNNF-AFGP--TVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 112 ~~~i~~~~gD~~~l~~~~-~~~d~dvv~~~~~-~~~~--~~~~~l~e~~r~LkpGG~~i 166 (268)
..+++|+++|+.++++.+ +. +|+|++... +|.+ +....+++++|+|||||+++
T Consensus 81 ~~~v~~~~~d~~~l~~~~~~~--fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 81 APGIEIWCGDFFALTARDIGH--CAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp CSSSEEEEECCSSSTHHHHHS--EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCccEEEECccccCCcccCCC--EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 247999999999999764 43 566776544 3433 34567899999999999833
No 8
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.76 E-value=3e-18 Score=147.53 Aligned_cols=119 Identities=17% Similarity=0.210 Sum_probs=92.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||||||+|.++..++... . +|+|+|+|+.++..++ +++. ..+ ..+++++++|+
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~--~~~~----~~~--~~~v~~~~~d~ 94 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV-K-KVVAFDLTEDILKVAR--AFIE----GNG--HQQVEYVQGDA 94 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-S-EEEEEESCHHHHHHHH--HHHH----HTT--CCSEEEEECCC
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-C-EEEEEeCCHHHHHHHH--HHHH----hcC--CCceEEEEecH
Confidence 35678888888999999999999999999888764 3 5999999997555443 3322 233 24799999999
Q ss_pred CCCcccccccceEEEEEe-ccccCcCHHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 123 LTEEHREKITQASIVFVN-NFAFGPTVDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~-~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
.++|++++. +|+|+++ .+.|.+++...+.++.|+|||||++++.++..+
T Consensus 95 ~~l~~~~~~--fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 95 EQMPFTDER--FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp -CCCSCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred HhCCCCCCC--EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 999987654 4666665 457889999999999999999999998755443
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.75 E-value=2e-18 Score=149.49 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=82.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+..+.+.. ..+.+|||||||+|.++..++.. +.. |+|||+|+.|+..|+ +..+++++++|++
T Consensus 30 ~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~-~~~-v~gvD~s~~ml~~a~--------------~~~~v~~~~~~~e 91 (257)
T 4hg2_A 30 FRWLGEVA--PARGDALDCGCGSGQASLGLAEF-FER-VHAVDPGEAQIRQAL--------------RHPRVTYAVAPAE 91 (257)
T ss_dssp HHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT-CSE-EEEEESCHHHHHTCC--------------CCTTEEEEECCTT
T ss_pred HHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh-CCE-EEEEeCcHHhhhhhh--------------hcCCceeehhhhh
Confidence 34444443 34568999999999999998864 444 999999986333221 2468999999999
Q ss_pred CCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+++++ +|+|++...+|+.++...+.++.|+|||||+|++.
T Consensus 92 ~~~~~~~s--fD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 92 DTGLPPAS--VDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CCCCCSSC--EEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccCCc--ccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 99988764 56788777778889999999999999999999875
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.75 E-value=4.6e-18 Score=146.13 Aligned_cols=119 Identities=13% Similarity=0.260 Sum_probs=94.1
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
.....+..+++.+++.++.+|||||||+|.++..+++.++.. |+|+|+|+.++..++ +++ ....+++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~-v~~vD~s~~~~~~a~--~~~--------~~~~~~~~~ 107 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAH-THGIDICSNIVNMAN--ERV--------SGNNKIIFE 107 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCE-EEEEESCHHHHHHHH--HTC--------CSCTTEEEE
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCE-EEEEeCCHHHHHHHH--HHh--------hcCCCeEEE
Confidence 445567788899999999999999999999999999877665 999999997444433 211 112589999
Q ss_pred EcCCCCCcccccccceEEEEEecc-ccC--cCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNF-AFG--PTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~-~~~--~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
++|+.++|++++. +|+|++... .|. +++...++++.++|||||++++.++
T Consensus 108 ~~d~~~~~~~~~~--fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 108 ANDILTKEFPENN--FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp ECCTTTCCCCTTC--EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECccccCCCCCCc--EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999876654 566666544 566 7888999999999999999998744
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=1.5e-17 Score=142.52 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=96.4
Q ss_pred ccCcHHHHHHHHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccE
Q psy17227 37 GETSFDLISRMIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEF 115 (268)
Q Consensus 37 g~~~~~~~~~ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i 115 (268)
++........++..+ ++.++.+|||||||+|..+..+++..+. +|+|+|+|+.++..++ +++. ..+. ..++
T Consensus 27 ~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~--~~~~----~~~~-~~~~ 98 (257)
T 3f4k_A 27 GPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFN--ENAV----KANC-ADRV 98 (257)
T ss_dssp SSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHH--HHHH----HTTC-TTTE
T ss_pred CCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHH--HHHH----HcCC-CCce
Confidence 345567777788887 6788999999999999999999998766 5999999997544443 3332 3343 2469
Q ss_pred EEEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 116 RLVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 116 ~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+++++|+.++|+++. .+|+|+++..++..++...++++.++|||||++++.+
T Consensus 99 ~~~~~d~~~~~~~~~--~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 99 KGITGSMDNLPFQNE--ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEEECCTTSCSSCTT--CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEECChhhCCCCCC--CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999999987654 4577877766555589999999999999999999874
No 12
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.74 E-value=8.1e-18 Score=140.17 Aligned_cols=123 Identities=17% Similarity=0.215 Sum_probs=94.5
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
........+++.++..++ +|||||||+|.++..+++. +..+++|+|+|+.++..++ +++. ..+. ..+++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~--~~~~----~~~~-~~~~~~~ 98 (219)
T 3dlc_A 28 IYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIAL--KNIA----DANL-NDRIQIV 98 (219)
T ss_dssp HHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEE
T ss_pred ccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHH--HHHH----hccc-cCceEEE
Confidence 444566778888888887 9999999999999999887 3345999999997554443 3332 2333 2489999
Q ss_pred EcCCCCCcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
++|+.+++++++. +|+|+++.. .|.+++...+++++++|||||++++.+.+.
T Consensus 99 ~~d~~~~~~~~~~--~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 99 QGDVHNIPIEDNY--ADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp ECBTTBCSSCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred EcCHHHCCCCccc--ccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 9999998876654 566766654 677899999999999999999999874443
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.73 E-value=1.9e-17 Score=143.19 Aligned_cols=122 Identities=15% Similarity=0.188 Sum_probs=94.1
Q ss_pred CcHHHHHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 39 TSFDLISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 39 ~~~~~~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
.......+++..+. +.++.+|||||||+|.++..+++. +..+|+|+|+|+.++..++ ++++ ..+. .+++++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~ 100 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFN--RNAR----QSGL-QNRVTG 100 (267)
T ss_dssp CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHH--HHHH----HTTC-TTTEEE
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHH--HHHH----HcCC-CcCcEE
Confidence 44566777888876 788999999999999999999887 5545999999997544443 3322 3343 247999
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+++|+.++|++++ .+|+|+++..++..++...++++.++|||||++++.++
T Consensus 101 ~~~d~~~~~~~~~--~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 101 IVGSMDDLPFRNE--ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp EECCTTSCCCCTT--CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEcChhhCCCCCC--CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999987654 45777776664434899999999999999999998743
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.73 E-value=2.2e-17 Score=140.71 Aligned_cols=122 Identities=18% Similarity=0.265 Sum_probs=95.3
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
++.....+++.+++.++.+|||||||+|.++..++... . +++|+|+|+.++..++ +++. ..+. .++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~--~~~~----~~~~--~~v~~~~ 75 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-Q-ECIGVDATKEMVEVAS--SFAQ----EKGV--ENVRFQQ 75 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-S-EEEEEESCHHHHHHHH--HHHH----HHTC--CSEEEEE
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-C-EEEEEECCHHHHHHHH--HHHH----HcCC--CCeEEEe
Confidence 45566778899999999999999999999999888753 4 4999999997554443 3332 2232 4799999
Q ss_pred cCCCCCcccccccceEEEEEe-ccccCcCHHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 120 GDFLTEEHREKITQASIVFVN-NFAFGPTVDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~-~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
+|+.++|++++. +|+|++. .+.|.+++...+.++.++|||||++++.+...+
T Consensus 76 ~d~~~~~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 76 GTAESLPFPDDS--FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp CBTTBCCSCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred cccccCCCCCCc--EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 999998876654 5667666 456888999999999999999999998755443
No 15
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.72 E-value=4.7e-17 Score=143.37 Aligned_cols=116 Identities=13% Similarity=0.139 Sum_probs=88.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.++++++.+|||||||+|.++..+++.+|.. |+|+|+|+.++..++ +++. ..+. ..+++++++|+
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~ 131 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVN-VIGLTLSENQYAHDK--AMFD----EVDS-PRRKEVRIQGW 131 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCE-EEEEECCHHHHHHHH--HHHH----HSCC-SSCEEEEECCG
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCE-EEEEECCHHHHHHHH--HHHH----hcCC-CCceEEEECCH
Confidence 45568888899999999999999999999999987865 999999997554443 3332 3343 24899999999
Q ss_pred CCCcccccccceEEEEEe-ccccCcCH---------HHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 123 LTEEHREKITQASIVFVN-NFAFGPTV---------DHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~-~~~~~~~~---------~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
.++ +..+ |+|++. .+.|.+++ ...++++.++|||||++++.+..
T Consensus 132 ~~~---~~~f--D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 132 EEF---DEPV--DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp GGC---CCCC--SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred HHc---CCCc--cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 876 3444 455554 44566554 78899999999999999987443
No 16
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.72 E-value=1.1e-16 Score=139.64 Aligned_cols=116 Identities=10% Similarity=0.109 Sum_probs=88.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||||||+|.++..+++..|+. |+|+|+|+.++..++ +++. ..+. ..+++++++|+
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~-v~gvd~s~~~~~~a~--~~~~----~~~~-~~~~~~~~~d~ 123 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVN-VVGLTLSKNQANHVQ--QLVA----NSEN-LRSKRVLLAGW 123 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCE-EEEEESCHHHHHHHH--HHHH----TCCC-CSCEEEEESCG
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCE-EEEEECCHHHHHHHH--HHHH----hcCC-CCCeEEEECCh
Confidence 44567888889999999999999999999999778885 999999997544443 3222 2332 24899999999
Q ss_pred CCCcccccccceEEEEEe-ccccC--cCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 123 LTEEHREKITQASIVFVN-NFAFG--PTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~-~~~~~--~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
.++| +.+ |+|++. .+.|. ++....++++.++|||||++++.++.
T Consensus 124 ~~~~---~~f--D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 124 EQFD---EPV--DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp GGCC---CCC--SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred hhCC---CCe--eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 8766 334 455554 45566 57889999999999999999987443
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.71 E-value=4.7e-17 Score=136.19 Aligned_cols=116 Identities=11% Similarity=0.076 Sum_probs=91.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
...+++.+++.++.+|||||||+|.++..+++.. +..+++|+|+|+.++..++ +++. ..+. .+++++++|+
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~--~~~~~~~~d~ 97 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAW--EKVN----KLGL--KNVEVLKSEE 97 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHH--HHHH----HHTC--TTEEEEECBT
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH--HHHH----HcCC--CcEEEEeccc
Confidence 4678888899999999999999999999999886 3446999999997555443 3332 2232 3799999999
Q ss_pred CCCcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 123 LTEEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
.++++++.. +|+|+++.. .|.++....++++.++|||||++++.+
T Consensus 98 ~~~~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 98 NKIPLPDNT--VDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp TBCSSCSSC--EEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCCCC--eeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 998876654 566666554 677889999999999999999999874
No 18
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=5.6e-17 Score=143.68 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=89.0
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+++.++ +.++.+|||||||+|.++..+++..+.. |+|+|+|+.++..++ +++. ..+. ..+++++++|+.+
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~ 178 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSR-VEGVTLSAAQADFGN--RRAR----ELRI-DDHVRSRVCNMLD 178 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCE-EEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEECCTTS
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCE-EEEEeCCHHHHHHHH--HHHH----HcCC-CCceEEEECChhc
Confidence 4777777 8899999999999999999999877765 999999997544443 3332 3343 2479999999999
Q ss_pred CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|++++. +|+|++...++..+....+.++.++|||||++++.+
T Consensus 179 ~~~~~~~--fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 179 TPFDKGA--VTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp CCCCTTC--EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCC--EeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9876654 566776655433368999999999999999999874
No 19
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.71 E-value=2.7e-17 Score=140.87 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=86.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.++..++.+|||||||+|.++..+++. +..+|+|+|+|+.++..++ +++ ...+++++++|+.+
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~--~~~---------~~~~~~~~~~d~~~ 101 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAK--RKT---------TSPVVCYEQKAIED 101 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHH--HHC---------CCTTEEEEECCGGG
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH--Hhh---------ccCCeEEEEcchhh
Confidence 34667777778999999999999999998876 4435999999997444433 111 13589999999999
Q ss_pred CcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+++.. +|+|++... .|.+++...+++++++|||||+++++
T Consensus 102 ~~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 102 IAIEPDA--YNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CCCCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCC--eEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 8876554 566666554 57789999999999999999999986
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.71 E-value=2.1e-17 Score=138.39 Aligned_cols=110 Identities=19% Similarity=0.281 Sum_probs=84.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
...+++.+...++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ ++ .. .+++++++|+.
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~~---------~~-~~~~~~~~d~~ 99 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRT-VYGIEPSREMRMIAK--EK---------LP-KEFSITEGDFL 99 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCE-EEEECSCHHHHHHHH--HH---------SC-TTCCEESCCSS
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCe-EEEEeCCHHHHHHHH--Hh---------CC-CceEEEeCChh
Confidence 456667776778999999999999999998876 554 999999997444433 11 11 47999999999
Q ss_pred CCcccccccceEEEEEecc-ccCcCHHH--HHHHHHhcCCCCcEEEEeCC
Q psy17227 124 TEEHREKITQASIVFVNNF-AFGPTVDH--ALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~-~~~~~~~~--~l~e~~r~LkpGG~~i~~~~ 170 (268)
+++++ +. +|+|+++.. .|.++... .++++.++|||||.+++.++
T Consensus 100 ~~~~~-~~--fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 100 SFEVP-TS--IDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp SCCCC-SC--CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hcCCC-CC--eEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 98876 44 456666554 56677665 89999999999999998744
No 21
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=3.9e-17 Score=140.00 Aligned_cols=114 Identities=17% Similarity=0.187 Sum_probs=90.9
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.......+++.+++.++.+|||||||+|.++..++...+..+++|+|+|+.++..++ ++ ..++++++
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~--~~-----------~~~~~~~~ 84 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAA--DR-----------LPNTNFGK 84 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHH--HH-----------STTSEEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH--Hh-----------CCCcEEEE
Confidence 345566788888888999999999999999999998875445999999997444433 11 24799999
Q ss_pred cCCCCCcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 120 GDFLTEEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|+.+++ ++. .+|+|+++.. .|.+++...+.+++++|||||++++..
T Consensus 85 ~d~~~~~-~~~--~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 85 ADLATWK-PAQ--KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp CCTTTCC-CSS--CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CChhhcC-ccC--CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999987 444 4567777655 566889999999999999999999863
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.70 E-value=9.3e-17 Score=134.53 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=87.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc---cccEEE
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR---HGEFRL 117 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~---~~~i~~ 117 (268)
......+++.+...++.+|||||||+|.++..+++..+..+++|+|+|+.++..++ +++. ..+.. ..++++
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~~~~~~~~~~v~~ 88 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQ--ERLD----RLRLPRNQWERLQL 88 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHH--HHHT----TCCCCHHHHTTEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHH--HHHH----HhcCCcccCcceEE
Confidence 34556677777777889999999999999999988766556999999997555443 3221 11211 127999
Q ss_pred EEcCCCCCcccccccceEEEEEecc-ccCcCH--HHHHHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNF-AFGPTV--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++|+..++..+..+ |+|++... .|.++. ...++++.++|||||.++++
T Consensus 89 ~~~d~~~~~~~~~~f--D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 89 IQGALTYQDKRFHGY--DAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EECCTTSCCGGGCSC--SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EeCCcccccccCCCc--CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 999998777655544 55666554 555543 78899999999999988876
No 23
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.70 E-value=6.9e-17 Score=141.77 Aligned_cols=121 Identities=13% Similarity=0.148 Sum_probs=89.0
Q ss_pred CCCcccCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHH-HHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc
Q psy17227 33 PFVYGETSFDLISRMIDQINATPDDVFVDLGSGVGQVV-LQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR 111 (268)
Q Consensus 33 ~~~~g~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~-~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~ 111 (268)
...|.+.....+..-...++++++++|||||||+|.++ +.+|+..++. |+|||+|+.++..|+ ++++ ..|.
T Consensus 100 ~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~-V~gIDis~~~l~~Ar--~~~~----~~gl- 171 (298)
T 3fpf_A 100 SFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMR-VNVVEIEPDIAELSR--KVIE----GLGV- 171 (298)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCE-EEEEESSHHHHHHHH--HHHH----HHTC-
T ss_pred cCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCE-EEEEECCHHHHHHHH--HHHH----hcCC-
Confidence 33444444444444456789999999999999999876 4455545665 999999998555544 4333 3444
Q ss_pred cccEEEEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 112 HGEFRLVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 112 ~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+++|+++|+.++| +.. +|+|++.+. .++....+.+++|+|||||++++.
T Consensus 172 -~~v~~v~gDa~~l~--d~~--FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 172 -DGVNVITGDETVID--GLE--FDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp -CSEEEEESCGGGGG--GCC--CSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred -CCeEEEECchhhCC--CCC--cCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 58999999999876 443 567777544 578899999999999999999986
No 24
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=9.6e-17 Score=134.52 Aligned_cols=122 Identities=14% Similarity=0.104 Sum_probs=88.5
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc---cccE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR---HGEF 115 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~---~~~i 115 (268)
..+.....+++.+...++.+|||||||+|.++..+++..+..+++|+|+|+.++..++ +++. ..+.. ..++
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~~~~~~~~~~v 86 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAK--DRLK----IDRLPEMQRKRI 86 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHH--HHHT----GGGSCHHHHTTE
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHH--HHHH----hhccccccCcce
Confidence 4445566677777667889999999999999999888666556999999997555443 3222 11211 1289
Q ss_pred EEEEcCCCCCcccccccceEEEEEecc-ccCcCH--HHHHHHHHhcCCCCcEEEEe
Q psy17227 116 RLVKGDFLTEEHREKITQASIVFVNNF-AFGPTV--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 116 ~~~~gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++++|+..+++.+..+ |+|++..+ .|.++. ...++++.++|||||.++++
T Consensus 87 ~~~~~d~~~~~~~~~~f--D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 87 SLFQSSLVYRDKRFSGY--DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEECCSSSCCGGGTTC--SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEeCcccccccccCCC--CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 99999998887665555 45655544 566643 68899999999999988775
No 25
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.2e-16 Score=140.42 Aligned_cols=121 Identities=15% Similarity=0.125 Sum_probs=88.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
..+...+..+...++.+|||||||+|..+..+++.+ +..+|+|+|+|+.++..++ ++++ ..+....+++|+++
T Consensus 23 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 23 SDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAE--VIKE----GSPDTYKNVSFKIS 96 (299)
T ss_dssp HHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHH--HHHH----HCC-CCTTEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH--HHHH----hccCCCCceEEEEc
Confidence 344455555545789999999999999999999865 5566999999997555443 3332 22011358999999
Q ss_pred CCCCCccccc----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREK----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.++++.+. ...+|+|++...+|+-++...+.++.++|||||.+++.
T Consensus 97 d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 97 SSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 9999987650 12467777766543339999999999999999999873
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=9.3e-17 Score=132.94 Aligned_cols=133 Identities=20% Similarity=0.216 Sum_probs=94.2
Q ss_pred HHHHHHhhcCCcccc-ccCCCCCCCCcccCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCC
Q psy17227 11 IQQTYNQSVTEPEKL-NVYQPFSPFVYGETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKAD 89 (268)
Q Consensus 11 ~~~~y~~~~~~~~~~-~~y~~~~~~~~g~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~ 89 (268)
+.+.|+.....++.. ...... .+.....+..++... +.+|||||||+|.++..++.. +.. ++|+|+|+
T Consensus 5 ~~~~y~~~a~~y~~~~~~~~~~-----~~~~~~~l~~~~~~~----~~~vLDiGcG~G~~~~~l~~~-~~~-v~gvD~s~ 73 (203)
T 3h2b_A 5 VSKAYSSPTFDAEALLGTVISA-----EDPDRVLIEPWATGV----DGVILDVGSGTGRWTGHLASL-GHQ-IEGLEPAT 73 (203)
T ss_dssp HHHHHHCTTTCHHHHTCSSCCT-----TCTTHHHHHHHHHHC----CSCEEEETCTTCHHHHHHHHT-TCC-EEEECCCH
T ss_pred HHHHHhhHHHHHHHHhhhhccc-----cHHHHHHHHHHhccC----CCeEEEecCCCCHHHHHHHhc-CCe-EEEEeCCH
Confidence 567788877655333 222211 123344455554442 778999999999999998876 665 99999998
Q ss_pred ChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEecc-ccCc--CHHHHHHHHHhcCCCCcEEE
Q psy17227 90 LPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNF-AFGP--TVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~-~~~~--~~~~~l~e~~r~LkpGG~~i 166 (268)
.++..++ + ...+++++++|+.++++++.. +|+|++... .|.+ ++...++++.++|||||+++
T Consensus 74 ~~~~~a~------~-------~~~~~~~~~~d~~~~~~~~~~--fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 74 RLVELAR------Q-------THPSVTFHHGTITDLSDSPKR--WAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLL 138 (203)
T ss_dssp HHHHHHH------H-------HCTTSEEECCCGGGGGGSCCC--EEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHH------H-------hCCCCeEEeCcccccccCCCC--eEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 7444433 1 124799999999998876554 566766554 4554 78999999999999999999
Q ss_pred EeC
Q psy17227 167 SSK 169 (268)
Q Consensus 167 ~~~ 169 (268)
+..
T Consensus 139 i~~ 141 (203)
T 3h2b_A 139 MSF 141 (203)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 27
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=6.6e-17 Score=139.57 Aligned_cols=110 Identities=17% Similarity=0.230 Sum_probs=87.2
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.......+++.++..++.+|||||||+|..+..++. .+. +|+|+|+|+.++..++ ...+++|++
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~--------------~~~~~~~~~ 82 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGL-FVYAVEPSIVMRQQAV--------------VHPQVEWFT 82 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTC-EEEEECSCHHHHHSSC--------------CCTTEEEEC
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCC-EEEEEeCCHHHHHHHH--------------hccCCEEEE
Confidence 345667788888889999999999999999999887 454 4999999986332221 123899999
Q ss_pred cCCCCCcccccccceEEEEEec-cccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNN-FAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~-~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+.++|++++.+| +|++.. +.|.+++...+++++++|| ||++++.
T Consensus 83 ~d~~~~~~~~~~fD--~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 83 GYAENLALPDKSVD--GVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp CCTTSCCSCTTCBS--EEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEE
T ss_pred CchhhCCCCCCCEe--EEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEE
Confidence 99999998766554 555554 5688999999999999999 9987765
No 28
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.70 E-value=4.9e-17 Score=138.40 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=83.6
Q ss_pred HHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc
Q psy17227 49 DQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH 127 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~ 127 (268)
+.++++||++|||||||+|.++..+|+..|. .+|+|+|+|+.|+..++ ++++ +.+|+..+.+|..+...
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~--~~a~--------~~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL--TVVR--------DRRNIFPILGDARFPEK 140 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH--HHST--------TCTTEEEEESCTTCGGG
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--HhhH--------hhcCeeEEEEeccCccc
Confidence 4568999999999999999999999998764 47999999997444332 2221 23589999999987542
Q ss_pred -cccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 128 -REKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 128 -~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.....+|+|++. +.+.++....+.++.+.|||||++++.
T Consensus 141 ~~~~~~~vDvVf~d-~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 141 YRHLVEGVDGLYAD-VAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp GTTTCCCEEEEEEC-CCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccceEEEEEEe-ccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 2223457888864 445567788899999999999999875
No 29
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.69 E-value=2.6e-16 Score=139.52 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=88.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||||||+|.++..+++..++. |+|+|+|+.++..++ +++. ..+. ..+++++++|+
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~ 149 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVN-VIGLTLSKNQHARCE--QVLA----SIDT-NRSRQVLLQGW 149 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCE-EEEEESCHHHHHHHH--HHHH----TSCC-SSCEEEEESCG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCE-EEEEECCHHHHHHHH--HHHH----hcCC-CCceEEEECCh
Confidence 44567888889999999999999999999999877775 999999997554443 3222 2333 24799999999
Q ss_pred CCCcccccccceEEEEEe-ccccC--cCHHHHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 123 LTEEHREKITQASIVFVN-NFAFG--PTVDHALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~-~~~~~--~~~~~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
.++| +.+ |+|++. .+.|. +++...++++.++|||||++++.++..
T Consensus 150 ~~~~---~~f--D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 150 EDFA---EPV--DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp GGCC---CCC--SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred HHCC---CCc--CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 8875 334 556555 44555 578899999999999999999874443
No 30
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.68 E-value=2.4e-16 Score=133.26 Aligned_cols=116 Identities=13% Similarity=0.149 Sum_probs=86.4
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
...++..+. ..++.+|||||||+|.++..++...+..+++|+|+|+.++..++ +++. ..++++++++|+
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~--~~~~--------~~~~~~~~~~d~ 101 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAK--NRFR--------GNLKVKYIEADY 101 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHTC--------SCTTEEEEESCT
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH--Hhhc--------cCCCEEEEeCch
Confidence 345556654 56789999999999999999998875556999999997444433 2211 123899999999
Q ss_pred CCCcccccccceEEEEEecc-ccCcCHH--HHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 123 LTEEHREKITQASIVFVNNF-AFGPTVD--HALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~-~~~~~~~--~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
.+++++ + .+|+|++... .|.++.. ..+++++++|||||++++.+...
T Consensus 102 ~~~~~~-~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 102 SKYDFE-E--KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp TTCCCC-S--CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hccCCC-C--CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 998875 3 4677777655 4555444 58999999999999999875443
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.68 E-value=1.1e-15 Score=126.83 Aligned_cols=116 Identities=14% Similarity=0.141 Sum_probs=89.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
......++..+++.++.+|||||||+|.++..+++..+..+|+|+|+|+.++..++ ++++ ..+. .+++++++
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~--~~v~~~~~ 97 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIR--DNLK----KFVA--RNVTLVEA 97 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHH--HHHH----HHTC--TTEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--HHHH----HhCC--CcEEEEeC
Confidence 33446688889999999999999999999999998865567999999997555543 3333 2333 58999999
Q ss_pred CCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.+...... .+|+|+++...+ +....+.++.++|||||++++.
T Consensus 98 d~~~~~~~~~--~~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 98 FAPEGLDDLP--DPDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CTTTTCTTSC--CCSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEE
T ss_pred ChhhhhhcCC--CCCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEE
Confidence 9976442222 457788765543 7889999999999999999986
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.68 E-value=2.6e-16 Score=137.28 Aligned_cols=113 Identities=13% Similarity=0.219 Sum_probs=85.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+..++..+... +.+|||||||+|.++..++.. +.. |+|+|+|+.++..++ +++. ..+. ..+++++++|+.
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~-v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~ 127 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQ-VILCDLSAQMIDRAK--QAAE----AKGV-SDNMQFIHCAAQ 127 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----C-CC-GGGEEEEESCGG
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCE-EEEEECCHHHHHHHH--HHHH----hcCC-CcceEEEEcCHH
Confidence 34566666554 679999999999999998886 665 999999997554443 3222 2232 258999999999
Q ss_pred CCc-ccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE-HREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~-~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++ +.+. .+|+|++... .|.+++...++++.++|||||++++.
T Consensus 128 ~~~~~~~~--~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 128 DVASHLET--PVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GTGGGCSS--CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred HhhhhcCC--CceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEE
Confidence 987 5554 4566766655 57889999999999999999999986
No 33
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.67 E-value=3.8e-16 Score=128.32 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=85.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+++.++..++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ +++. ..+. .+++++++|+.++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~~~~----~~~~--~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYD-VDAWDKNAMSIANVE--RIKS----IENL--DNLHTRVVDLNNL 92 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----HHTC--TTEEEEECCGGGC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCe-EEEEECCHHHHHHHH--HHHH----hCCC--CCcEEEEcchhhC
Confidence 4666677778889999999999999998876 654 999999997544443 3332 2232 3799999999988
Q ss_pred cccccccceEEEEEecc-ccCc--CHHHHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 126 EHREKITQASIVFVNNF-AFGP--TVDHALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~~~--~~~~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
++ +. .+|+|+++.. .|.+ +....++++.++|||||++++..++.
T Consensus 93 ~~-~~--~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 93 TF-DR--QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp CC-CC--CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CC-CC--CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 86 43 4677777665 4444 68889999999999999988764443
No 34
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.67 E-value=3.1e-16 Score=135.30 Aligned_cols=111 Identities=10% Similarity=-0.033 Sum_probs=77.6
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHH-----H-HHhc-----cccccEEEEEc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRW-----M-QWYG-----KRHGEFRLVKG 120 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~-----~-~~~~-----~~~~~i~~~~g 120 (268)
...++.+|||+|||+|..+..+|+. |.. |+|||+|+.|+..|+ +..... . ...+ ....+++|+++
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~-V~gvD~S~~~i~~a~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHT-VVGVEISEIGIREFF--AEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCE-EEEECSCHHHHHHHH--HHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCe-EEEEECCHHHHHHHH--HhcccccccccccccccccccccCCCceEEEEC
Confidence 4568889999999999999999875 775 999999998555443 211000 0 0000 01258999999
Q ss_pred CCCCCcccccccceEEEEEeccc-cC--cCHHHHHHHHHhcCCCCcEEEE
Q psy17227 121 DFLTEEHREKITQASIVFVNNFA-FG--PTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~-~~--~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
|+.++++.+. ..+|+|++..++ +. ++....++++.++|||||++++
T Consensus 141 D~~~l~~~~~-~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 141 SIFDLPRANI-GKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp CTTTGGGGCC-CCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ccccCCcccC-CCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9999987531 246778766543 33 3456789999999999999863
No 35
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=3e-16 Score=128.88 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=86.8
Q ss_pred cCcHHHHHHHHHHcC---CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccccc
Q psy17227 38 ETSFDLISRMIDQIN---ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGE 114 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~---~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 114 (268)
++.......+++.+. ..++.+|||+|||+|.+++.++. .+..+|+|+|+|+.++..++ ++++ ..+. .+
T Consensus 24 p~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~--~~ 94 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIA--RNIE----ALGL--SG 94 (189)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHH--HHHH----HHTC--SC
T ss_pred cCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHH--HHHH----HcCC--Cc
Confidence 344444455555543 25788999999999999998776 46666999999998555544 3333 2332 58
Q ss_pred EEEEEcCCCCCcccccccceEEEEEeccccC--cCHHHHHHHHHh--cCCCCcEEEEe
Q psy17227 115 FRLVKGDFLTEEHREKITQASIVFVNNFAFG--PTVDHALKERFQ--DLKDGARIVSS 168 (268)
Q Consensus 115 i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~--~~~~~~l~e~~r--~LkpGG~~i~~ 168 (268)
++++++|+.+++.......+|+|+++..++. ++....+.++.+ +|||||++++.
T Consensus 95 v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 95 ATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp EEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred eEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 9999999988652111134678888876554 567888999988 99999999985
No 36
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.67 E-value=4.2e-17 Score=136.76 Aligned_cols=116 Identities=13% Similarity=0.088 Sum_probs=83.4
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
..+..+.+.++.+|||||||+|.++..+++..+..+|+|+|+|+.|+..+. +.+++.....+ ..+++++++|+.++
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~--~~a~~~~~~~~--~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS--AKAAAKPAKGG--LPNLLYLWATAERL 93 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH--HHHTSCGGGTC--CTTEEEEECCSTTC
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH--HHHHHhhhhcC--CCceEEEecchhhC
Confidence 455566688999999999999999999999875666999999998665321 11111111122 34899999999999
Q ss_pred cccccccceEEEEEec-c--c---cCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNN-F--A---FGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~-~--~---~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.++. |.+++.. + . |.++....+++++++|||||++++.
T Consensus 94 ~~~~~~---d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 94 PPLSGV---GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CSCCCE---EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCC---CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 976543 3443221 1 1 4456688999999999999999985
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.67 E-value=2.5e-16 Score=133.60 Aligned_cols=109 Identities=16% Similarity=0.183 Sum_probs=84.9
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++..++.+|||||||+|.++..+++. +..+++|+|+|+.++..++ ++ . ...+++++++|+.++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~--~~--------~-~~~~~~~~~~d~~~~ 101 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARAR--AA--------G-PDTGITYERADLDKL 101 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHH--HT--------S-CSSSEEEEECCGGGC
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHH--Hh--------c-ccCCceEEEcChhhc
Confidence 4666677778999999999999999988875 6635999999987444433 11 1 124799999999988
Q ss_pred cccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++++.. +|+|++... .|.+++...++++.++|||||++++.
T Consensus 102 ~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 102 HLPQDS--FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp CCCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCC--ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 865543 566666554 57788999999999999999999986
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.66 E-value=3e-16 Score=136.04 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=87.3
Q ss_pred HHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 49 DQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
....+.++.+|||||||+|.++..+++..+..+++|+|+|+.++..++ +++. ..+ ..+++++++|+.+++++
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~--~~~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAR--ENTE----KNG--IKNVKFLQANIFSLPFE 102 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH--HHHH----HTT--CCSEEEEECCGGGCCSC
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcC--CCCcEEEEcccccCCCC
Confidence 344568899999999999999999998865556999999997544443 3332 223 24799999999998876
Q ss_pred ccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 129 EKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 129 ~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+. .+|+|+++.. .|.+++...+.++.++|||||++++.+
T Consensus 103 ~~--~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 103 DS--SFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp TT--CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 65 4566776655 578899999999999999999999874
No 39
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.66 E-value=4.3e-16 Score=130.74 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=77.0
Q ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC----c
Q psy17227 51 INATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE----E 126 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l----~ 126 (268)
+++++|++|||||||+|..+..+++..+..+|+|+|+|+.|+ +.+.+.+++ ..++.++++|+.+. +
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l--~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~ 122 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF--EKLLELVRE--------RNNIIPLLFDASKPWKYSG 122 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH--HHHHHHHHH--------CSSEEEECSCTTCGGGTTT
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH--HHHHHHHhc--------CCCeEEEEcCCCCchhhcc
Confidence 567899999999999999999999887644699999998743 333333332 24799999999874 3
Q ss_pred ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. ..+|+|+++.. +..+....+.+++++|||||+|++.
T Consensus 123 ~~---~~fD~V~~~~~-~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 123 IV---EKVDLIYQDIA-QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp TC---CCEEEEEECCC-STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cc---cceeEEEEecc-ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 32 35688888732 2222334589999999999999986
No 40
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.66 E-value=1.8e-16 Score=144.61 Aligned_cols=114 Identities=21% Similarity=0.258 Sum_probs=86.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHh-c-cccccEEEEEcCCCCC----
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWY-G-KRHGEFRLVKGDFLTE---- 125 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~-~-~~~~~i~~~~gD~~~l---- 125 (268)
+.++.+|||||||+|..+..+++..+ ..+|+|+|+|+.++..++ +++++..... | ....+++|+++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~--~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVAR--KYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHH--HTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 56889999999999999999998863 446999999998555544 3333211111 2 2235899999999997
Q ss_pred --cccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 126 --EHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 126 --~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+++++. +|+|+++.. .|.+++...+++++++|||||++++.+.
T Consensus 159 ~~~~~~~~--fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 159 PEGVPDSS--VDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp SCCCCTTC--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCCCC--EEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 766554 567777655 5778999999999999999999998743
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=5.3e-16 Score=126.64 Aligned_cols=112 Identities=12% Similarity=0.104 Sum_probs=78.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
...++. ..++++++|||||||+|.++..+|+. +. +|+|+|+|+.++..++ ++++ ..+. .+++++++|+.
T Consensus 12 ~~~~l~-~~~~~~~~vLDiGcG~G~~~~~la~~-~~-~v~~vD~s~~~l~~a~--~~~~----~~~~--~~v~~~~~~~~ 80 (185)
T 3mti_A 12 SHDFLA-EVLDDESIVVDATMGNGNDTAFLAGL-SK-KVYAFDVQEQALGKTS--QRLS----DLGI--ENTELILDGHE 80 (185)
T ss_dssp HHHHHH-TTCCTTCEEEESCCTTSHHHHHHHTT-SS-EEEEEESCHHHHHHHH--HHHH----HHTC--CCEEEEESCGG
T ss_pred HHHHHH-HhCCCCCEEEEEcCCCCHHHHHHHHh-CC-EEEEEECCHHHHHHHH--HHHH----HcCC--CcEEEEeCcHH
Confidence 334443 35788999999999999999999886 44 4999999998555543 3333 2333 58999998888
Q ss_pred CCc-ccccccceEEEEEe-ccccC---------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE-HREKITQASIVFVN-NFAFG---------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~-~~~~~~d~dvv~~~-~~~~~---------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++ +.+. .+|+|+++ .+++. .+....+.+++++|||||++++.
T Consensus 81 ~l~~~~~~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 81 NLDHYVRE--PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp GGGGTCCS--CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhhccC--CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 754 3233 46777766 33222 33456789999999999999876
No 42
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.66 E-value=4.7e-16 Score=133.38 Aligned_cols=104 Identities=19% Similarity=0.301 Sum_probs=81.8
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.+.++.+|||||||+|.++..+++. +.. ++|+|+|+.++..++ +++. + ...+++++++|+.++|++++.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~~~~------~-~~~~~~~~~~d~~~~~~~~~~ 104 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYR-YIALDADAAMLEVFR--QKIA------G-VDRKVQVVQADARAIPLPDES 104 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCE-EEEEESCHHHHHHHH--HHTT------T-SCTTEEEEESCTTSCCSCTTC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCE-EEEEECCHHHHHHHH--HHhh------c-cCCceEEEEcccccCCCCCCC
Confidence 6788999999999999999988875 554 999999997544443 2210 1 235899999999998876554
Q ss_pred cceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|++... .|.++....+.++.++|||||++++.
T Consensus 105 --fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 105 --VHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --EEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred --eeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 566766554 56778999999999999999999986
No 43
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=2.6e-16 Score=136.93 Aligned_cols=106 Identities=24% Similarity=0.365 Sum_probs=85.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+.+.++.+|||||||+|.++..++. .+. .|+|+|+|+.++..++ + ...+++++++|+.+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~------~-------~~~~~~~~~~d~~~ 111 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGA-EVLGTDNAATMIEKAR------Q-------NYPHLHFDVADARN 111 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHH------H-------HCTTSCEEECCTTT
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCC-eEEEEECCHHHHHHHH------h-------hCCCCEEEECChhh
Confidence 4577788888999999999999999999887 454 4999999997444433 1 01478999999999
Q ss_pred CcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|++ + .+|+|++... .|.+++...++++.++|||||++++.
T Consensus 112 ~~~~-~--~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 112 FRVD-K--PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CCCS-S--CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcC-C--CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEE
Confidence 8863 3 4567777655 56689999999999999999999986
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=6e-16 Score=135.22 Aligned_cols=117 Identities=19% Similarity=0.275 Sum_probs=90.1
Q ss_pred HHHHHHHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 42 DLISRMIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 42 ~~~~~ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
..+..+++.+ .+.++.+|||||||+|..+..++..++. .+|+|+|+|+.++..++ +++. . ...++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~---~~~~v~~~~ 78 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAR--ELFR----L---LPYDSEFLE 78 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHH--HHHH----S---SSSEEEEEE
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----h---cCCceEEEE
Confidence 4455566555 6778999999999999999999887653 56999999997544443 3322 1 123899999
Q ss_pred cCCCCCcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 120 GDFLTEEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+|+.+++++ + .+|+|++... .|.+++...+++++++|||||++++.++
T Consensus 79 ~d~~~~~~~-~--~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 79 GDATEIELN-D--KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp SCTTTCCCS-S--CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cchhhcCcC-C--CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 999998874 3 4677777655 6778999999999999999999998744
No 45
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.65 E-value=4.2e-16 Score=133.13 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=87.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
...+++.+...++.+|||||||+|.++..++... ..+|+|+|+|+.++..++ +++. ...+++++++|+.
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~--~~~~--------~~~~~~~~~~d~~ 150 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAK--RELA--------GMPVGKFILASME 150 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHH--HHTT--------TSSEEEEEESCGG
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHH--HHhc--------cCCceEEEEccHH
Confidence 3567778888889999999999999999988865 445999999997544443 2221 1257999999999
Q ss_pred CCcccccccceEEEEEecc-ccC--cCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 124 TEEHREKITQASIVFVNNF-AFG--PTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~-~~~--~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+++++++ .+|+|++... .|. .++...++++.++|||||++++.++
T Consensus 151 ~~~~~~~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 151 TATLPPN--TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GCCCCSS--CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HCCCCCC--CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9887654 3566766655 455 4578889999999999999998744
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.65 E-value=3.5e-16 Score=130.36 Aligned_cols=110 Identities=12% Similarity=0.144 Sum_probs=83.0
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
...+++.+. +.++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ + .+ ..+++++++|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~-v~~~D~s~~~~~~a~--~--------~~--~~~~~~~~~d~ 99 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADR-VTALDGSAEMIAEAG--R--------HG--LDNVEFRQQDL 99 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSE-EEEEESCHHHHHHHG--G--------GC--CTTEEEEECCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCe-EEEEeCCHHHHHHHH--h--------cC--CCCeEEEeccc
Confidence 345556654 778889999999999999998886 554 999999987444433 1 22 25899999999
Q ss_pred CCCcccccccceEEEEEecc-ccCcCH--HHHHHHHHhcCCCCcEEEEeCC
Q psy17227 123 LTEEHREKITQASIVFVNNF-AFGPTV--DHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~-~~~~~~--~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
.++ +++. .+|+|+++.. .|.++. ...++++.++|||||++++.+.
T Consensus 100 ~~~-~~~~--~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 100 FDW-TPDR--QWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp TSC-CCSS--CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccC-CCCC--ceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 987 4444 4567777655 455653 7889999999999999998743
No 47
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=2.6e-15 Score=125.23 Aligned_cols=112 Identities=18% Similarity=0.255 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.....++..+++.++++|||||||+|.++..+|+. +.. |+|+|+|+.++..++ ++++ ..+. ..+++++++|
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~-v~~vD~s~~~~~~a~--~~~~----~~g~-~~~v~~~~~d 112 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGR-AITIEPRADRIENIQ--KNID----TYGL-SPRMRAVQGT 112 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEESC
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCE-EEEEeCCHHHHHHHH--HHHH----HcCC-CCCEEEEeCc
Confidence 33456788889999999999999999999999887 554 999999998555544 3333 2343 2389999999
Q ss_pred CCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+..... ..+|+|+++... +.. .+.+++++|||||++++.
T Consensus 113 ~~~~~~~~--~~~D~v~~~~~~---~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 113 APAALADL--PLPEAVFIGGGG---SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp TTGGGTTS--CCCSEEEECSCC---CHH-HHHHHHHHSCTTCEEEEE
T ss_pred hhhhcccC--CCCCEEEECCcc---cHH-HHHHHHHhcCCCcEEEEE
Confidence 98832222 245778776532 555 899999999999999985
No 48
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.65 E-value=2.2e-16 Score=131.50 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=80.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+++..+.. ++.+|||||||+|.++..+ +..+++|+|+|+.++..++ ++ ..+++++++|+.+
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~--~~-----------~~~~~~~~~d~~~ 88 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGR--RR-----------APEATWVRAWGEA 88 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHH--HH-----------CTTSEEECCCTTS
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHH--Hh-----------CCCcEEEEccccc
Confidence 445555543 8889999999999998765 6635999999987444433 11 1478999999999
Q ss_pred CcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 EEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|++++. +|+|++... .|.+++...++++.++|||||+++++.
T Consensus 89 ~~~~~~~--fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 89 LPFPGES--FDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp CCSCSSC--EEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCc--EEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 9876654 566666555 577889999999999999999999863
No 49
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.64 E-value=5.6e-16 Score=131.45 Aligned_cols=102 Identities=18% Similarity=0.245 Sum_probs=80.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ + .. ...+++++++|+.++|+++..
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~--------~~-~~~~~~~~~~d~~~~~~~~~~- 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-GYK-AVGVDISEVMIQKGK--E--------RG-EGPDLSFIKGDLSSLPFENEQ- 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-TCE-EEEEESCHHHHHHHH--T--------TT-CBTTEEEEECBTTBCSSCTTC-
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-CCe-EEEEECCHHHHHHHH--h--------hc-ccCCceEEEcchhcCCCCCCC-
Confidence 458889999999999999998886 665 999999987444433 1 11 235899999999999876654
Q ss_pred ceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 133 QASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 133 d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|+|++... .|.+++...+.+++++|||||++++..
T Consensus 117 -fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 117 -FEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp -EEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 556666544 678899999999999999999999863
No 50
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.64 E-value=1.5e-15 Score=122.69 Aligned_cols=118 Identities=13% Similarity=0.170 Sum_probs=85.2
Q ss_pred CcHHH-HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 39 TSFDL-ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 39 ~~~~~-~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
.+.+. ...+++.+.+.++.+|||||||+|.++..+++..+..+|+|+|+|+.++..++ ++++ ..+. ..++ +
T Consensus 8 ~t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~~-~ 79 (178)
T 3hm2_A 8 LTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL--SNAI----NLGV-SDRI-A 79 (178)
T ss_dssp SHHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH--HHHH----TTTC-TTSE-E
T ss_pred ccHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH--HHHH----HhCC-CCCE-E
Confidence 33343 35677888999999999999999999999988776667999999997555443 3332 2332 2378 8
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++|+.+ ++++....+|+|+++...+. ...++++.++|||||++++.
T Consensus 80 ~~~d~~~-~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 80 VQQGAPR-AFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EECCTTG-GGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEE
T ss_pred EecchHh-hhhccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEE
Confidence 8999865 33331124567877665544 67889999999999999986
No 51
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.64 E-value=4.8e-15 Score=128.24 Aligned_cols=121 Identities=8% Similarity=-0.028 Sum_probs=85.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCC------hhHHHHHHHHHHHHHHHhcccccc
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADL------PAKYAEMHTVFKRWMQWYGKRHGE 114 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~ 114 (268)
....++++.+++.++.+|||||||+|.++..+++..|. .+|+|+|+|+. ++..++ +++. ..+. ..+
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~--~~~~----~~~~-~~~ 102 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAW--NHLL----AGPL-GDR 102 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHH--HHHH----TSTT-GGG
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHH--HHHH----hcCC-CCc
Confidence 34456888889999999999999999999999988742 45999999986 444443 3332 2222 248
Q ss_pred EEEEEcC---CCCCcccccccceEEEEEe-ccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 115 FRLVKGD---FLTEEHREKITQASIVFVN-NFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 115 i~~~~gD---~~~l~~~~~~~d~dvv~~~-~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
++++++| ...+|++++.+| +|++. .+.|.++....++.+.++++|||++++.+..
T Consensus 103 v~~~~~d~~~~~~~~~~~~~fD--~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPIADQHFD--RVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp EEEECSCCTTTCCGGGTTCCCS--EEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred eEEEECChhhhccCCCCCCCEE--EEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 9999998 445666655554 55554 4467777776444444566679999987443
No 52
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=8.1e-17 Score=137.42 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--cccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HREK 130 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~~~ 130 (268)
..+|.+|||||||+|..+..+++..+. +++|||+|+.++..|+ +++. . ...+++++.+|+.++. +++.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~--~~~~----~---~~~~~~~~~~~a~~~~~~~~~~ 127 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLR--DWAP----R---QTHKVIPLKGLWEDVAPTLPDG 127 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHH--HHGG----G---CSSEEEEEESCHHHHGGGSCTT
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHH--HHHh----h---CCCceEEEeehHHhhccccccc
Confidence 468899999999999999988875554 4999999997444433 3322 1 2347999999987643 4444
Q ss_pred ccceEEEEEe------ccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVN------NFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~------~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. +|.|+.. ..+|.++....+.+++|+|||||+|++.
T Consensus 128 ~--FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 128 H--FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp C--EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred C--CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 3 4566543 2356778889999999999999999875
No 53
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.63 E-value=4.5e-16 Score=132.45 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=79.7
Q ss_pred HHHHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 42 DLISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 42 ~~~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
....++...+. ++++.+|||||||+|.++..+++. +.. |+|+|+|+.++..++ .+++++++
T Consensus 27 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~gvD~s~~~~~~a~----------------~~~~~~~~ 88 (240)
T 3dli_A 27 LVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE-GIE-SIGVDINEDMIKFCE----------------GKFNVVKS 88 (240)
T ss_dssp HHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH-TCC-EEEECSCHHHHHHHH----------------TTSEEECS
T ss_pred HHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC-CCc-EEEEECCHHHHHHHH----------------hhcceeec
Confidence 33344544443 567899999999999999988875 666 999999987443332 13889999
Q ss_pred CCCCC--cccccccceEEEEEe-ccccCc--CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTE--EHREKITQASIVFVN-NFAFGP--TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l--~~~~~~~d~dvv~~~-~~~~~~--~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.++ |++++.+| +|++. .+.|.+ +....++++.++|||||++++.
T Consensus 89 d~~~~~~~~~~~~fD--~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 89 DAIEYLKSLPDKYLD--GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp CHHHHHHTSCTTCBS--EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred cHHHHhhhcCCCCee--EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99875 66565554 55554 445666 5589999999999999999986
No 54
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=1.4e-16 Score=128.23 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=82.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+++.++.+|||||||+|.++..+++... +++|+|+|+.++..++ + . .++++++++|
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~------~----~---~~~v~~~~~d--- 68 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVK------E----K---FDSVITLSDP--- 68 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHH------H----H---CTTSEEESSG---
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHH------H----h---CCCcEEEeCC---
Confidence 4566777888999999999999999999887653 5999999987444433 1 1 3489999999
Q ss_pred CcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 EEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
++++++ .+|+|+++.. .|.+++...++++.++|||||++++.+
T Consensus 69 ~~~~~~--~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 69 KEIPDN--SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp GGSCTT--CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCC--ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEE
Confidence 565554 4567776655 577889999999999999999999873
No 55
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.62 E-value=4.5e-16 Score=136.80 Aligned_cols=119 Identities=14% Similarity=0.259 Sum_probs=83.4
Q ss_pred HHHHHcCC--CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHH----------------
Q psy17227 46 RMIDQINA--TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQW---------------- 107 (268)
Q Consensus 46 ~ll~~l~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~---------------- 107 (268)
.++..+.. .++.+|||||||+|.+++.+|..++..+|+|||+|+.++..|+ ++++.....
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~--~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSAR--QNIRHYLSEELRLPPQTLEGDPGAE 112 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHH--HTC----------------------
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HHHHhhhhhhccccccccccccccc
Confidence 34444433 3788999999999999999999887767999999998666554 222210000
Q ss_pred ---------------------hc--------------c-ccccEEEEEcCCCCCc-----ccccccceEEEEEeccccC-
Q psy17227 108 ---------------------YG--------------K-RHGEFRLVKGDFLTEE-----HREKITQASIVFVNNFAFG- 145 (268)
Q Consensus 108 ---------------------~~--------------~-~~~~i~~~~gD~~~l~-----~~~~~~d~dvv~~~~~~~~- 145 (268)
.| . -..+++|+++|+.+.+ +.+ ..+|+|++..++++
T Consensus 113 ~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~--~~fD~I~~~~vl~~i 190 (292)
T 3g07_A 113 GEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQT--PEYDVVLCLSLTKWV 190 (292)
T ss_dssp -----------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCC--CCEEEEEEESCHHHH
T ss_pred cccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccC--CCcCEEEEChHHHHh
Confidence 00 0 0048999999998654 223 35688888776422
Q ss_pred ------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 146 ------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 146 ------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++...+++++++|||||+|++.
T Consensus 191 hl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 191 HLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 26778899999999999999985
No 56
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.62 E-value=7.2e-16 Score=127.90 Aligned_cols=104 Identities=24% Similarity=0.294 Sum_probs=77.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
..++.+|||+|||+|..+..++...+.. ++|+|+|+.++..++ +++.+ .+ .+++++++|+.++|++++.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~-v~~vD~s~~~~~~a~--~~~~~----~~---~~~~~~~~d~~~~~~~~~~- 89 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYK-TYGIEISDLQLKKAE--NFSRE----NN---FKLNISKGDIRKLPFKDES- 89 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCE-EEEEECCHHHHHHHH--HHHHH----HT---CCCCEEECCTTSCCSCTTC-
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCE-EEEEECCHHHHHHHH--HHHHh----cC---CceEEEECchhhCCCCCCc-
Confidence 4678899999999999855455555664 999999997555443 33321 22 4789999999998876543
Q ss_pred ceEEEEEecc-ccC--cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNF-AFG--PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~-~~~--~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|++... .|. ++....+++++++|||||++++.
T Consensus 90 -fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 90 -MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp -EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 567776544 555 56788899999999999999986
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=2e-15 Score=126.12 Aligned_cols=107 Identities=12% Similarity=0.090 Sum_probs=80.8
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+...+...++.+|||||||+|.++..+++. +. +++|+|+|+.++..++ +++. ..++++++++|+.+++
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~--~~~~--------~~~~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CK-RLTVIDVMPRAIGRAC--QRTK--------RWSHISWAATDILQFS 110 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EE-EEEEEESCHHHHHHHH--HHTT--------TCSSEEEEECCTTTCC
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CC-EEEEEECCHHHHHHHH--Hhcc--------cCCCeEEEEcchhhCC
Confidence 333567778899999999999999988875 33 5999999997544443 2221 2348999999999987
Q ss_pred ccccccceEEEEEecc-ccCcCH---HHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREKITQASIVFVNNF-AFGPTV---DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~-~~~~~~---~~~l~e~~r~LkpGG~~i~~ 168 (268)
++. .+|+|+++.. .|.+++ ...+.++.++|||||.++++
T Consensus 111 -~~~--~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 111 -TAE--LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp -CSC--CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -CCC--CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 333 4677777655 566665 56699999999999999985
No 58
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.62 E-value=7.3e-16 Score=130.66 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=80.5
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 45 SRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..+++.+. ..++.+|||||||+|.++..+++. +.. |+|+|+|+.++..++ +++ .. +++++++|+.
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~gvD~s~~~~~~a~--~~~---------~~-~v~~~~~d~~ 96 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH-FND-ITCVEASEEAISHAQ--GRL---------KD-GITYIHSRFE 96 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT-CSC-EEEEESCHHHHHHHH--HHS---------CS-CEEEEESCGG
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh-CCc-EEEEeCCHHHHHHHH--Hhh---------hC-CeEEEEccHH
Confidence 33444442 457788999999999999988875 444 999999987444433 111 11 8999999998
Q ss_pred CCcccccccceEEEEEecc-ccCcCHHHHHHHHH-hcCCCCcEEEEeC
Q psy17227 124 TEEHREKITQASIVFVNNF-AFGPTVDHALKERF-QDLKDGARIVSSK 169 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~-r~LkpGG~~i~~~ 169 (268)
+++ +++ .+|+|++... .|.+++...++++. |+|||||+++++.
T Consensus 97 ~~~-~~~--~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 97 DAQ-LPR--RYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp GCC-CSS--CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HcC-cCC--cccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 873 344 3566766555 67889999999999 9999999999874
No 59
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.61 E-value=1.8e-15 Score=127.29 Aligned_cols=107 Identities=22% Similarity=0.330 Sum_probs=80.2
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc---cccEEEEEcCCCCCcccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR---HGEFRLVKGDFLTEEHRE 129 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~---~~~i~~~~gD~~~l~~~~ 129 (268)
+.++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ +++. ..+.. ..+++++++|+.++++++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYS-VTGIDINSEAIRLAE--TAAR----SPGLNQKTGGKAEFKVENASSLSFHD 99 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHTT----CCSCCSSSSCEEEEEECCTTSCCSCT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCe-EEEEECCHHHHHHHH--HHHH----hcCCccccCcceEEEEecccccCCCC
Confidence 458899999999999999998886 554 999999997544443 2221 11211 126899999999988765
Q ss_pred cccceEEEEEecc-ccCcCHH---HHHHHHHhcCCCCcEEEEeC
Q psy17227 130 KITQASIVFVNNF-AFGPTVD---HALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 130 ~~~d~dvv~~~~~-~~~~~~~---~~l~e~~r~LkpGG~~i~~~ 169 (268)
.. +|+|+++.. .|.++.. ..++++.++|||||++++.+
T Consensus 100 ~~--~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 100 SS--FDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp TC--EEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Cc--eeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 54 566666554 5677776 88999999999999999863
No 60
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.61 E-value=4.6e-15 Score=126.28 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=80.7
Q ss_pred HHHHHHHHc---CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 43 LISRMIDQI---NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 43 ~~~~ll~~l---~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
....++..+ ++++|++|||||||+|..+..+|...+ ..+|+|+|+|+.|+ ..+.+.+++ ..++.++
T Consensus 61 la~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l--~~l~~~a~~--------r~nv~~i 130 (232)
T 3id6_C 61 LAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVV--RELLLVAQR--------RPNIFPL 130 (232)
T ss_dssp HHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHH--HHHHHHHHH--------CTTEEEE
T ss_pred HHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHH--HHHHHHhhh--------cCCeEEE
Confidence 344555554 489999999999999999999998765 44699999999742 222222221 2489999
Q ss_pred EcCCCCCcccc-cccceEEEEEeccccCcCHHHHHHH-HHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHRE-KITQASIVFVNNFAFGPTVDHALKE-RFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~-~~~d~dvv~~~~~~~~~~~~~~l~e-~~r~LkpGG~~i~~ 168 (268)
++|+.+.+... ....+|+|+++... ++....+.+ +.+.|||||+|++.
T Consensus 131 ~~Da~~~~~~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 131 LADARFPQSYKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp ECCTTCGGGTTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccccchhhhccccceEEEEecCCC--hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99998754211 12357899987543 566666554 45599999999976
No 61
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=4.9e-16 Score=135.84 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=86.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+...++.+|||||||+|..+..++.. +. +|+|+|+|+.++..++ +++.+.. ......++.+.++|+.+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~--~~~~~~~--~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GF-SVTSVDASDKMLKYAL--KERWNRR--KEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TC-EEEEEESCHHHHHHHH--HHHHHTT--TSHHHHTCEEEECCGGG
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CC-eEEEEECCHHHHHHHH--Hhhhhcc--cccccceeeEeecChhh
Confidence 44555666678899999999999999998876 55 4999999998655554 2221100 00012478999999998
Q ss_pred Cc---ccccccceEEEEEe--ccccCcC-------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE---HREKITQASIVFVN--NFAFGPT-------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~---~~~~~~d~dvv~~~--~~~~~~~-------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ ++++ .+|+|++. .+.|.++ ....+++++++|||||++++.
T Consensus 121 ~~~~~~~~~--~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 121 LDKDVPAGD--GFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp HHHHSCCTT--CEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CccccccCC--CeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 87 5554 45677774 4567788 899999999999999999976
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=2.7e-16 Score=133.70 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=78.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+...+ ..++.+|||||||+|.++..+++ .+..+|+|+|+|+.|+..++ ++++ .. ..+++++++|+.+
T Consensus 51 ~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~-~~~~~v~gvD~s~~~l~~a~--~~~~----~~---~~~v~~~~~d~~~ 119 (236)
T 1zx0_A 51 HALAAAA-SSKGGRVLEVGFGMAIAASKVQE-APIDEHWIIECNDGVFQRLR--DWAP----RQ---THKVIPLKGLWED 119 (236)
T ss_dssp HHHHHHH-TTTCEEEEEECCTTSHHHHHHHT-SCEEEEEEEECCHHHHHHHH--HHGG----GC---SSEEEEEESCHHH
T ss_pred HHHHhhc-CCCCCeEEEEeccCCHHHHHHHh-cCCCeEEEEcCCHHHHHHHH--HHHH----hc---CCCeEEEecCHHH
Confidence 3344433 57889999999999999998865 34446999999997555443 2221 11 2479999999998
Q ss_pred C--cccccccceEEEEEecc------ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 E--EHREKITQASIVFVNNF------AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l--~~~~~~~d~dvv~~~~~------~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ |++++. +|+|+++.+ .+..+....+++++|+|||||++++.
T Consensus 120 ~~~~~~~~~--fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 120 VAPTLPDGH--FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HGGGSCTTC--EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred hhcccCCCc--eEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 7 776654 566766211 12333456789999999999999976
No 63
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.61 E-value=9.3e-16 Score=124.28 Aligned_cols=120 Identities=16% Similarity=0.132 Sum_probs=84.2
Q ss_pred CcHHHHHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 39 TSFDLISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 39 ~~~~~~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
+.......+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.++..++ ++++ ..+. ..++++
T Consensus 14 ~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~~~~ 85 (177)
T 2esr_A 14 TSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQ--DNII----MTKA-ENRFTL 85 (177)
T ss_dssp ----CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHH--HHHH----TTTC-GGGEEE
T ss_pred CHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCceEE
Confidence 33344556777776 678899999999999999998876 6556999999997555543 3332 2232 247999
Q ss_pred EEcCCCC-CcccccccceEEEEEeccccCcCHHHHHHHHH--hcCCCCcEEEEe
Q psy17227 118 VKGDFLT-EEHREKITQASIVFVNNFAFGPTVDHALKERF--QDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~-l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~--r~LkpGG~~i~~ 168 (268)
+++|+.+ ++..+. .+|+|+++..++.......+..+. ++|||||++++.
T Consensus 86 ~~~d~~~~~~~~~~--~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~ 137 (177)
T 2esr_A 86 LKMEAERAIDCLTG--RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCE 137 (177)
T ss_dssp ECSCHHHHHHHBCS--CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred EECcHHHhHHhhcC--CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEE
Confidence 9999987 343222 478898876654444556666776 999999999985
No 64
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.61 E-value=6e-16 Score=128.72 Aligned_cols=119 Identities=12% Similarity=0.020 Sum_probs=83.2
Q ss_pred HHHHHHHHcCC-CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 43 LISRMIDQINA-TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 43 ~~~~ll~~l~~-~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
....+++.+.. .++.+|||+|||+|.+++.++.. +...|+|+|+|+.++..++ ++++ ..+....+++++++|
T Consensus 40 ~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~--~~~~----~~~~~~~~v~~~~~d 112 (201)
T 2ift_A 40 VKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLK--KNLQ----TLKCSSEQAEVINQS 112 (201)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHH--HHHH----HTTCCTTTEEEECSC
T ss_pred HHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHH--HHHH----HhCCCccceEEEECC
Confidence 33445555443 26789999999999999987665 5556999999998555544 3333 233211489999999
Q ss_pred CCCCcccccccc-eEEEEEeccccCcCHHHHHHHH--HhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQ-ASIVFVNNFAFGPTVDHALKER--FQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d-~dvv~~~~~~~~~~~~~~l~e~--~r~LkpGG~~i~~ 168 (268)
+.++........ +|+|+++..++..+....+..+ .++|||||++++.
T Consensus 113 ~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 113 SLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp HHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEE
Confidence 977532111135 7889888776656677778888 6789999999875
No 65
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=4.6e-15 Score=120.75 Aligned_cols=126 Identities=18% Similarity=0.116 Sum_probs=90.7
Q ss_pred CcccCcHHHHHHHHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccc
Q psy17227 35 VYGETSFDLISRMIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHG 113 (268)
Q Consensus 35 ~~g~~~~~~~~~ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 113 (268)
.+.+........+++.+ ...++.+|||+|||+|.++..++. .+..+|+|+|+|+.++..++ ++++ ..+. ..
T Consensus 23 ~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~ 94 (187)
T 2fhp_A 23 NTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIK--ENIA----ITKE-PE 94 (187)
T ss_dssp SSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHH--HHHH----HHTC-GG
T ss_pred CcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHH--HHHH----HhCC-Cc
Confidence 44556666777778777 456889999999999999998877 45556999999997555544 3333 2232 24
Q ss_pred cEEEEEcCCCCCcc--cccccceEEEEEeccccCcCHHHHHHHH--HhcCCCCcEEEEe
Q psy17227 114 EFRLVKGDFLTEEH--REKITQASIVFVNNFAFGPTVDHALKER--FQDLKDGARIVSS 168 (268)
Q Consensus 114 ~i~~~~gD~~~l~~--~~~~~d~dvv~~~~~~~~~~~~~~l~e~--~r~LkpGG~~i~~ 168 (268)
+++++++|+.+... +.....+|+|+++..++.......+..+ .++|||||++++.
T Consensus 95 ~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 95 KFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp GEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEE
Confidence 79999999987321 1112357889888665555667777777 8899999999975
No 66
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=6.8e-16 Score=131.37 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.++.+|||||||+|.++..+++.. ...++|+|+|+.++..++ +++. ..+ ..+++++++|+.+++++++ .
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~--~~~~----~~~--~~~~~~~~~d~~~~~~~~~--~ 146 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAK--TYLG----EEG--KRVRNYFCCGLQDFTPEPD--S 146 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHH--HHTG----GGG--GGEEEEEECCGGGCCCCSS--C
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHH--HHhh----hcC--CceEEEEEcChhhcCCCCC--C
Confidence 368899999999999999887765 445999999997544443 2221 111 2479999999998886544 4
Q ss_pred eEEEEEecc-ccCcC--HHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 134 ASIVFVNNF-AFGPT--VDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 134 ~dvv~~~~~-~~~~~--~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
+|+|++... .|.++ ....++++.++|||||++++.++.
T Consensus 147 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 147 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 567777655 45555 458899999999999999987443
No 67
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=2e-15 Score=126.60 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=78.3
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.++.+|||||||+|.++..+++.. . +++|+|+|+.++..++ +++.. .+ .+++++++|+.++++++.
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~--~~~~~----~~---~~~~~~~~d~~~~~~~~~-- 102 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG-F-EVVGVDISEDMIRKAR--EYAKS----RE---SNVEFIVGDARKLSFEDK-- 102 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHH--HHHHH----TT---CCCEEEECCTTSCCSCTT--
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC-C-EEEEEECCHHHHHHHH--HHHHh----cC---CCceEEECchhcCCCCCC--
Confidence 3458899999999999999888764 4 5999999987555443 33321 12 579999999999876544
Q ss_pred ceEEEEEecc--cc-CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNF--AF-GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~--~~-~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++.. ++ .++....++++.++|||||++++.
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4577777665 33 346778899999999999999986
No 68
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.60 E-value=1.3e-14 Score=130.83 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=90.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
....+++.+++.++.+|||||||+|.++..+++.++..+++|+|+ +.++..++ +++. ..+. ..+++++++|+
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~ 249 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVN--ENAA----EKGV-ADRMRGIAVDI 249 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHH--HHHH----HTTC-TTTEEEEECCT
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHH--HHHH----hcCC-CCCEEEEeCcc
Confidence 345677888888999999999999999999999876656999999 87555443 3333 2333 24699999999
Q ss_pred CCCcccccccceEEEEEeccc-cCcC--HHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 123 LTEEHREKITQASIVFVNNFA-FGPT--VDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~-~~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
.+.|+++ .|+|++..++ ++++ ....++++.++|||||++++.+...+
T Consensus 250 ~~~~~~~----~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 250 YKESYPE----ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp TTSCCCC----CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred ccCCCCC----CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 9887643 2677766664 5655 67889999999999999988754443
No 69
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=7e-15 Score=119.82 Aligned_cols=116 Identities=17% Similarity=0.193 Sum_probs=87.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.....+++.+...++.+|||+|||+|.++..+++. +. +++|+|+|+.++..++ +++. ..+....+++++++|
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~--~~~~----~~~~~~~~~~~~~~d 110 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VK-STTMADINRRAIKLAK--ENIK----LNNLDNYDIRVVHSD 110 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SS-EEEEEESCHHHHHHHH--HHHH----HTTCTTSCEEEEECS
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CC-eEEEEECCHHHHHHHH--HHHH----HcCCCccceEEEECc
Confidence 45677888888889999999999999999988876 55 4999999997555443 3332 223221139999999
Q ss_pred CCCCcccccccceEEEEEeccccC--cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFG--PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~--~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+.. .+ ..+|+|+++..++. .+....+.++.++|||||++++.
T Consensus 111 ~~~~~-~~--~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 111 LYENV-KD--RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp TTTTC-TT--SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccc-cc--CCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 98733 22 24688888776554 45677899999999999999986
No 70
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.60 E-value=3.4e-15 Score=132.96 Aligned_cols=120 Identities=14% Similarity=0.144 Sum_probs=90.2
Q ss_pred HHHHHHHHcCC--CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 43 LISRMIDQINA--TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 43 ~~~~ll~~l~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
....+++.+++ .++.+|||||||+|.++..+++.++..+++|+|+| .++..++ +++. ..+. ..+++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~--~~~~----~~~~-~~~v~~~~~ 222 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAK--ENAR----IQGV-ASRYHTIAG 222 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHH--HHHH----HHTC-GGGEEEEES
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHH--HHHH----hcCC-CcceEEEec
Confidence 34567777887 88899999999999999999988766569999999 7555443 3332 2333 247999999
Q ss_pred CCCCCcccccccceEEEEEeccc-cCc--CHHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 121 DFLTEEHREKITQASIVFVNNFA-FGP--TVDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~-~~~--~~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
|+.+.++++. +|+|++...+ +++ +....++++.++|||||++++.+...+
T Consensus 223 d~~~~~~~~~---~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 223 SAFEVDYGND---YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CTTTSCCCSC---EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ccccCCCCCC---CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 9998776432 6788876664 453 346889999999999999998755443
No 71
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.60 E-value=9.1e-16 Score=135.41 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=82.5
Q ss_pred cCCCCCCEEEEEcCCCCHHHHHHH-HHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc
Q psy17227 51 INATPDDVFVDLGSGVGQVVLQVA-AATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE 129 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~G~~~~~la-~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~ 129 (268)
..+.++.+|||||||+|..+..+| ...+..+|+|+|+|+.++..++ +++. ..+. ..+++++++|+.++|++
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~- 185 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGAT--RLAA----GHAL-AGQITLHRQDAWKLDTR- 185 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHH--HHHT----TSTT-GGGEEEEECCGGGCCCC-
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHH--HHHH----hcCC-CCceEEEECchhcCCcc-
Confidence 357889999999999999999885 3344446999999997544443 3322 2232 24699999999998875
Q ss_pred cccceEEEEEecc-ccCcCHHH---HHHHHHhcCCCCcEEEEeCC
Q psy17227 130 KITQASIVFVNNF-AFGPTVDH---ALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 130 ~~~d~dvv~~~~~-~~~~~~~~---~l~e~~r~LkpGG~~i~~~~ 170 (268)
+ .+|+|+++.. +|.++... .++++.++|||||++++.+.
T Consensus 186 ~--~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 186 E--GYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp S--CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred C--CeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 3 4677887654 56677665 58999999999999998743
No 72
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=1e-15 Score=129.78 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=73.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCC-CChhHHH-HHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKA-DLPAKYA-EMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s-~~~~~~a-~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
..++.+|||||||+|.++..+|+..+...|+|||+| +.|+..| .+++++. ..+ ..+++|+++|+.++|. .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~----~~~--~~~v~~~~~d~~~l~~--~ 93 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPS----KGG--LSNVVFVIAAAESLPF--E 93 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGG----GTC--CSSEEEECCBTTBCCG--G
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHH----HcC--CCCeEEEEcCHHHhhh--h
Confidence 468889999999999999999876665569999999 4433443 1222211 222 2489999999999873 2
Q ss_pred ccc-eEEEEEeccccCc--------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQ-ASIVFVNNFAFGP--------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d-~dvv~~~~~~~~~--------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++ +|.+.++. .++ +....+.+++|+|||||++++.
T Consensus 94 ~~d~v~~i~~~~--~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 94 LKNIADSISILF--PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp GTTCEEEEEEES--CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCeEEEEEEeC--CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 223 34444432 222 2345789999999999999884
No 73
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.60 E-value=1e-15 Score=134.30 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=71.6
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----HHhCCcEE--EEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVA----AATGCKIC--WGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la----~~~~~~~v--~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
..++.+|||||||+|.++..++ ...+...+ +|+|+|+.|+..++ +++.+ ..+....++.+.++++.+++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~--~~~~~---~~~~~~v~~~~~~~~~~~~~ 124 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYK--ELVAK---TSNLENVKFAWHKETSSEYQ 124 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHH--HHHHT---CSSCTTEEEEEECSCHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHH--HHHHh---ccCCCcceEEEEecchhhhh
Confidence 4677899999999998765433 33333323 99999998555543 32221 01211113455666665543
Q ss_pred ------ccccccceEEEEEec-cccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 ------HREKITQASIVFVNN-FAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ------~~~~~~d~dvv~~~~-~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++++. +|+|++.. ++|.+++...+++++|+|||||++++.
T Consensus 125 ~~~~~~~~~~~--fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 125 SRMLEKKELQK--WDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp HHHHTTTCCCC--EEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhccccCCCc--eeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 23443 56666654 468899999999999999999999986
No 74
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.59 E-value=2e-15 Score=131.71 Aligned_cols=107 Identities=18% Similarity=0.203 Sum_probs=80.3
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc-ccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH-REK 130 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~-~~~ 130 (268)
.+.++.+|||||||+|.++..+++. +...++|+|+|+.++..++ +++. ..+. ..+++++++|+.++|+ .++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~~~~ 132 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDAR--VRAR----NMKR-RFKVFFRAQDSYGRHMDLGK 132 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHH--HHHH----TSCC-SSEEEEEESCTTTSCCCCSS
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHH--HHHH----hcCC-CccEEEEECCccccccCCCC
Confidence 3678899999999999999987765 6546999999997554443 3322 1222 1479999999999887 343
Q ss_pred ccceEEEEEecccc-----CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAF-----GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~-----~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|++...+| .++....++++.++|||||++++.
T Consensus 133 --~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 133 --EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp --CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --CcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 467777765543 355778899999999999999986
No 75
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=2.9e-15 Score=126.37 Aligned_cols=104 Identities=13% Similarity=0.023 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c--ccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E--HREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~--~~~~~ 131 (268)
++.+|||||||+|.++..+|+..+...|+|||+|+.++..++ ++++ ..+. .+++++++|+.++ + ++++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~--~~~~----~~~l--~nv~~~~~Da~~~l~~~~~~~- 104 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACL--ASAH----EEGL--SNLRVMCHDAVEVLHKMIPDN- 104 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHH--HHHH----HTTC--SSEEEECSCHHHHHHHHSCTT-
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHH--HHHH----HhCC--CcEEEEECCHHHHHHHHcCCC-
Confidence 678999999999999999999877667999999997444433 3333 2332 4799999999874 3 4444
Q ss_pred cceEEEEEeccccCcCH---------HHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTV---------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~---------~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|.|+++....++.. ...+.++.++|||||.|++.
T Consensus 105 -~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 105 -SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp -CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred -ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 4566776532222221 14889999999999999875
No 76
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.59 E-value=7.6e-15 Score=125.23 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Cc--ccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EE--HRE 129 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~--~~~ 129 (268)
..++.+|||||||+|.+++.+|+..+...++|||+|+.|+..|+ +++++..........+++++++|+.+ ++ +++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~--~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQ--DRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHH--HHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHH--HHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC
Confidence 45677899999999999999998876666999999998666554 32221100000123589999999987 66 544
Q ss_pred cccceEEEEEeccccCcC---------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFAFGPT---------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~~~~---------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ .+|.|+++....++. ....+.++.++|||||.|++.
T Consensus 122 ~--~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 122 G--QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp T--CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred c--CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 4 356676642211111 136789999999999999875
No 77
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.59 E-value=3.3e-15 Score=126.62 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=81.4
Q ss_pred HHHH---HHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 44 ISRM---IDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 44 ~~~l---l~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
+..+ ++.+++.++.+|||||||+|.++..+++..|..+|+|+|+|+.++..++ ++++ ...++.++++
T Consensus 60 ~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~--~~~~--------~~~~v~~~~~ 129 (230)
T 1fbn_A 60 AAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELL--DACA--------ERENIIPILG 129 (230)
T ss_dssp HHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHH--HHTT--------TCTTEEEEEC
T ss_pred HHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHH--HHhh--------cCCCeEEEEC
Confidence 3556 5666788999999999999999999999877556999999997444433 2222 1258999999
Q ss_pred CCCC----CcccccccceEEEEEeccccCcCH---HHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLT----EEHREKITQASIVFVNNFAFGPTV---DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~----l~~~~~~~d~dvv~~~~~~~~~~~---~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.+ +++. . .+|+|+.+ .+++ ...+.++.++|||||++++.
T Consensus 130 d~~~~~~~~~~~-~--~~D~v~~~----~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 130 DANKPQEYANIV-E--KVDVIYED----VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CTTCGGGGTTTS-C--CEEEEEEC----CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcccccccC-c--cEEEEEEe----cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 9998 5543 2 46777732 2333 66699999999999999985
No 78
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.59 E-value=5.8e-15 Score=121.57 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=83.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+....++++++|||+|||+|.++..+++..+ ..+++|+|+|+.++..++ ++++ ..+. ..+++++++|+.+
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~ 85 (197)
T 3eey_A 13 HDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTT--KKLT----DLNL-IDRVTLIKDGHQN 85 (197)
T ss_dssp HHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHH--HHHH----HTTC-GGGEEEECSCGGG
T ss_pred HHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCCeEEEECCHHH
Confidence 344455678999999999999999999998864 346999999997555443 3333 2333 2589999999988
Q ss_pred Cc-ccccccceEEEEEeccccC----------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE-HREKITQASIVFVNNFAFG----------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~-~~~~~~d~dvv~~~~~~~~----------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ +.+ ..+|+|+++..++. .+....++++.++|||||++++.
T Consensus 86 ~~~~~~--~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 86 MDKYID--CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp GGGTCC--SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Hhhhcc--CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 76 333 35678887754321 13456899999999999999976
No 79
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=2.2e-15 Score=127.64 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
..+..++..+.+.++ +|||||||+|.++..++. .+. +|+|+|+|+.++..++ +++. ..+. ..+++|+++|
T Consensus 54 ~~l~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d 123 (235)
T 3lcc_A 54 PLIVHLVDTSSLPLG-RALVPGCGGGHDVVAMAS-PER-FVVGLDISESALAKAN--ETYG----SSPK-AEYFSFVKED 123 (235)
T ss_dssp HHHHHHHHTTCSCCE-EEEEETCTTCHHHHHHCB-TTE-EEEEECSCHHHHHHHH--HHHT----TSGG-GGGEEEECCC
T ss_pred HHHHHHHHhcCCCCC-CEEEeCCCCCHHHHHHHh-CCC-eEEEEECCHHHHHHHH--HHhh----ccCC-CcceEEEECc
Confidence 455667777766665 999999999999998865 344 4999999997555443 3222 1111 2479999999
Q ss_pred CCCCcccccccceEEEEEecc-ccCc--CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNF-AFGP--TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~-~~~~--~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+++.. . .+|+|++..+ .|.+ +....++++.++|||||++++.
T Consensus 124 ~~~~~~~-~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 124 VFTWRPT-E--LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp TTTCCCS-S--CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCCC-C--CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEE
Confidence 9997743 2 4677877665 4455 7888899999999999999975
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=4e-15 Score=126.68 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=79.5
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc-
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI- 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~- 131 (268)
+.++.+|||||||+|..+..+++... . |+|+|+|+.++..++ +++ ...+++++++|+.++++....
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~-v~gvD~s~~~~~~a~--~~~---------~~~~~~~~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-R-VIGLDVSKSALEIAA--KEN---------TAANISYRLLDGLVPEQAAQIH 120 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-C-EEEEESCHHHHHHHH--HHS---------CCTTEEEEECCTTCHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-C-EEEEECCHHHHHHHH--HhC---------cccCceEEECcccccccccccc
Confidence 57888999999999999999988654 4 999999997544443 211 134899999999997754321
Q ss_pred --cceEEEEEeccc-cCc--CHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 132 --TQASIVFVNNFA-FGP--TVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 132 --~d~dvv~~~~~~-~~~--~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
..+|+|+++.++ |.+ +....++++.++|||||++++.+.
T Consensus 121 ~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 125678777664 555 678899999999999999887643
No 81
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.59 E-value=3.2e-15 Score=131.40 Aligned_cols=116 Identities=12% Similarity=0.116 Sum_probs=83.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc-cccEEEEE
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR-HGEFRLVK 119 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~i~~~~ 119 (268)
...+..+++.+...++ +|||||||+|.++..+++. +.. |+|+|+|+.++..++ +++. ..+.. ..++++++
T Consensus 69 ~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~-v~gvD~s~~~~~~a~--~~~~----~~~~~~~~~v~~~~ 139 (299)
T 3g2m_A 69 TSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWE-VTALELSTSVLAAFR--KRLA----EAPADVRDRCTLVQ 139 (299)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCC-EEEEESCHHHHHHHH--HHHH----TSCHHHHTTEEEEE
T ss_pred cHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCe-EEEEECCHHHHHHHH--HHHh----hcccccccceEEEe
Confidence 4456677888776555 8999999999999998876 665 999999997555543 3322 11100 14799999
Q ss_pred cCCCCCcccccccceEEEEE-eccccCc---CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFV-NNFAFGP---TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~-~~~~~~~---~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+.++|+ +. .+|+|++ ..+++.. +....++++.++|||||++++.
T Consensus 140 ~d~~~~~~-~~--~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 140 GDMSAFAL-DK--RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp CBTTBCCC-SC--CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CchhcCCc-CC--CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99999887 33 4565654 3444433 3578899999999999999986
No 82
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=9.9e-16 Score=132.53 Aligned_cols=115 Identities=17% Similarity=0.104 Sum_probs=77.4
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHH-------------HHHHhcc--------
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKR-------------WMQWYGK-------- 110 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~-------------~~~~~~~-------- 110 (268)
+..++.+|||||||+|.++..++. .+..+|+|+|+|+.|+..++ +++++ .+...+.
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~-~~~~~v~g~D~s~~~l~~a~--~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAAC-DSFQDITLSDFTDRNREELE--KWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHH--HHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHH-hhhcceeeccccHHHHHHHH--HHHhcCCCcccchHHHHHHHhcCCCCcchhhHH
Confidence 567889999999999988775544 46656999999998666654 22211 0000000
Q ss_pred --ccccEE-EEEcCCCCC-cccc-cccceEEEEEeccccC-----cCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 111 --RHGEFR-LVKGDFLTE-EHRE-KITQASIVFVNNFAFG-----PTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 111 --~~~~i~-~~~gD~~~l-~~~~-~~~d~dvv~~~~~~~~-----~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
...+++ ++++|+.+. |+.. ....+|+|+++..+|. +++...+++++++|||||+|+++.
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 012455 999999984 4321 1125678887765432 456788999999999999999873
No 83
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.58 E-value=9.8e-15 Score=121.41 Aligned_cols=111 Identities=18% Similarity=0.164 Sum_probs=84.2
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.+..+..+++.+++.++.+|||||||+|.++..+++. +. +|+|+|+|+.++..++ +++. ..+ ..++++++
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~--~~~~----~~~--~~~v~~~~ 131 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQ-HVCSVERIKGLQWQAR--RRLK----NLD--LHNVSTRH 131 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SS-EEEEEESCHHHHHHHH--HHHH----HTT--CCSEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CC-EEEEEecCHHHHHHHH--HHHH----HcC--CCceEEEE
Confidence 4556778889999999999999999999999999887 44 4999999997544443 3333 233 24799999
Q ss_pred cCCCCCcccccccceEEEEEeccc-cCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFA-FGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~-~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+.+.+..+. .+|+|+++..+ +.++ ++.+.|||||++++.
T Consensus 132 ~d~~~~~~~~~--~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 132 GDGWQGWQARA--PFDAIIVTAAPPEIPT------ALMTQLDEGGILVLP 173 (210)
T ss_dssp SCGGGCCGGGC--CEEEEEESSBCSSCCT------HHHHTEEEEEEEEEE
T ss_pred CCcccCCccCC--CccEEEEccchhhhhH------HHHHhcccCcEEEEE
Confidence 99988654433 46778876553 4443 678999999999986
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.58 E-value=2.7e-15 Score=129.17 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=78.3
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.++.+|||||||+|.++..+++. +. +|+|+|+|+.++..++ ++ ..+++++++|+.++++ +.
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~--~~-----------~~~~~~~~~d~~~~~~-~~-- 109 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADS-FG-TVEGLELSADMLAIAR--RR-----------NPDAVLHHGDMRDFSL-GR-- 109 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTT-SS-EEEEEESCHHHHHHHH--HH-----------CTTSEEEECCTTTCCC-SC--
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHc-CC-eEEEEECCHHHHHHHH--hh-----------CCCCEEEECChHHCCc-cC--
Confidence 356789999999999999988775 44 4999999987444433 11 2379999999999887 33
Q ss_pred ceEEEEEec-c-ccCc---CHHHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 133 QASIVFVNN-F-AFGP---TVDHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 133 d~dvv~~~~-~-~~~~---~~~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
.+|+|++.. . .|.+ +....++++.++|||||++++.....|.
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 467777764 4 4553 5667899999999999999996443343
No 85
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.58 E-value=1e-14 Score=120.47 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=80.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
..+..++..+ .++ +|||||||+|.++..+++. +. +++|+|+|+.++..++ +++.. .+ .+++++++|
T Consensus 19 ~~l~~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~--~~~~~----~~---~~~~~~~~d 84 (202)
T 2kw5_A 19 DFLVSVANQI--PQG-KILCLAEGEGRNACFLASL-GY-EVTAVDQSSVGLAKAK--QLAQE----KG---VKITTVQSN 84 (202)
T ss_dssp SSHHHHHHHS--CSS-EEEECCCSCTHHHHHHHTT-TC-EEEEECSSHHHHHHHH--HHHHH----HT---CCEEEECCB
T ss_pred HHHHHHHHhC--CCC-CEEEECCCCCHhHHHHHhC-CC-eEEEEECCHHHHHHHH--HHHHh----cC---CceEEEEcC
Confidence 3455566654 466 9999999999999988775 66 4999999987554443 33321 22 279999999
Q ss_pred CCCCcccccccceEEEEEeccccC-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFG-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.++++++..+ |+|++...++. .+....+.++.++|||||++++.
T Consensus 85 ~~~~~~~~~~f--D~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 85 LADFDIVADAW--EGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp TTTBSCCTTTC--SEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred hhhcCCCcCCc--cEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99988765544 55665433222 45778899999999999999986
No 86
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.58 E-value=1.3e-15 Score=126.78 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
..+..++.. +.++.+|||||||+|.++..+++. +.. ++|+|+|+.++..++ ++ .+++++++|
T Consensus 32 ~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~--~~------------~~~~~~~~d 93 (211)
T 3e23_A 32 ATLTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFD-VDATDGSPELAAEAS--RR------------LGRPVRTML 93 (211)
T ss_dssp HHHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HH------------HTSCCEECC
T ss_pred HHHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCe-EEEECCCHHHHHHHH--Hh------------cCCceEEee
Confidence 344555554 457889999999999999998876 554 999999987444433 11 156789999
Q ss_pred CCCCcccccccceEEEEEecc-ccCc--CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNF-AFGP--TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~-~~~~--~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+++ .+. .+|+|+++.. .|.+ +....++++.++|||||++++.
T Consensus 94 ~~~~~-~~~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 94 FHQLD-AID--AYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp GGGCC-CCS--CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccCC-CCC--cEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99888 333 4677777655 4555 6788999999999999999986
No 87
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.58 E-value=8.5e-15 Score=122.88 Aligned_cols=105 Identities=19% Similarity=0.124 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--ccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HREKI 131 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~~~~ 131 (268)
.++.+|||||||+|.+++.+|+..+...++|||+|+.++..++ +++. ..+. .+++++++|+.+++ ++++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~--~~~~----~~~~--~nv~~~~~d~~~l~~~~~~~~ 108 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAV--QKVK----DSEA--QNVKLLNIDADTLTDVFEPGE 108 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHH--HHHH----HSCC--SSEEEECCCGGGHHHHCCTTS
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHH--HHHH----HcCC--CCEEEEeCCHHHHHhhcCcCC
Confidence 4678999999999999999999876666999999998555543 3333 2332 48999999999876 44443
Q ss_pred cceEEEEEeccccCcC---------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPT---------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~---------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|.|+++....++. ....+.++.++|||||.|++.
T Consensus 109 --~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 109 --VKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp --CCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred --cCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 45666643222221 256789999999999999875
No 88
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.58 E-value=1.6e-14 Score=129.76 Aligned_cols=110 Identities=19% Similarity=0.301 Sum_probs=82.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+.+.+.+.++.+|||||||+|.++..+++. |..+|+|+|+|+ ++..++ ++++ ..+. ..+++++++|+.++
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~--~~~~----~~~~-~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAM--DIIR----LNKL-EDTITLIKGKIEEV 125 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHH--HHHH----HTTC-TTTEEEEESCTTTS
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHH--HHHH----HcCC-CCcEEEEEeeHHHh
Confidence 3555566788999999999999999988875 665699999996 554443 3333 2333 25899999999998
Q ss_pred cccccccceEEEEEecc----ccCcCHHHHHHHHHhcCCCCcEEE
Q psy17227 126 EHREKITQASIVFVNNF----AFGPTVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~----~~~~~~~~~l~e~~r~LkpGG~~i 166 (268)
++++. .+|+|+++.. .+..++...+.++.++|||||+++
T Consensus 126 ~~~~~--~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPVE--KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSCS--CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCC--cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 87643 4678887652 234456778899999999999998
No 89
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.58 E-value=5.5e-15 Score=128.88 Aligned_cols=109 Identities=12% Similarity=0.097 Sum_probs=81.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+++.+...++.+|||||||+|.++..+++. +.. |+|+|+|+.++..++ +++. ..+ .+++++++|+.++
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~~-v~~vD~s~~~~~~a~--~~~~----~~~---~~~~~~~~d~~~~ 179 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGRNSLYLSLL-GYD-VTSWDHNENSIAFLN--ETKE----KEN---LNISTALYDINAA 179 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----HTT---CCEEEEECCGGGC
T ss_pred HHHHHhhccCCCcEEEECCCCCHHHHHHHHC-CCe-EEEEECCHHHHHHHH--HHHH----HcC---CceEEEEeccccc
Confidence 3444554458899999999999999998886 664 999999997554443 3332 222 2899999999987
Q ss_pred cccccccceEEEEEeccc-cC--cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNFA-FG--PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~~-~~--~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ +. .+|+|+++..+ |. ++....++++.++|||||++++.
T Consensus 180 ~~-~~--~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 180 NI-QE--NYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp CC-CS--CEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cc-cC--CccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76 33 46778877654 33 44668899999999999997765
No 90
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.58 E-value=1.4e-15 Score=127.18 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=84.1
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+...++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ + ..++.++++|+.+
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~------~--------~~~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GIE-AVGVDGDRTLVDAAR------A--------AGAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCE-EEEEESCHHHHHHHH------H--------TCSSCEEECCHHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCE-EEEEcCCHHHHHHHH------H--------hcccccchhhHHh
Confidence 34666666677799999999999999988876 665 999999987444433 1 1467889999887
Q ss_pred C---cccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 E---EHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 l---~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+ ++..+ ..+|+|+++..++.+++...++++.++|||||++++..
T Consensus 106 ~~~~~~~~~-~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 106 LAEAKVPVG-KDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp HHTTCSCCC-CCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred hcccccccC-CCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 6 43322 23788888877678889999999999999999999873
No 91
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.57 E-value=1.1e-15 Score=133.80 Aligned_cols=121 Identities=13% Similarity=0.034 Sum_probs=78.8
Q ss_pred HHHHHHcCC--CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHH-------------HHHHhc
Q psy17227 45 SRMIDQINA--TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKR-------------WMQWYG 109 (268)
Q Consensus 45 ~~ll~~l~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~-------------~~~~~~ 109 (268)
..+.+.+.. .++.+|||||||+|..+..++...+. .|+|+|+|+.|+..++ +++++ .+...+
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~-~v~gvD~s~~~l~~a~--~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFE-DITMTDFLEVNRQELG--RWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCS-EEEEECSCHHHHHHHH--HHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCC-eEEEeCCCHHHHHHHH--HHHhhCcccccchhhhhHHHHhcC
Confidence 445555432 37889999999999965444433344 5999999998655544 22110 000011
Q ss_pred c-----------ccccEEEEEcCCCC-Ccccccc---cceEEEEEeccc-c----CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 110 K-----------RHGEFRLVKGDFLT-EEHREKI---TQASIVFVNNFA-F----GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 110 ~-----------~~~~i~~~~gD~~~-l~~~~~~---~d~dvv~~~~~~-~----~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ....++++++|+.+ +|+.+.. ..+|+|+++..+ | .+++...+++++|+|||||+|++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0 01137889999998 7754321 237888877664 4 346889999999999999999986
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.57 E-value=2.7e-14 Score=119.43 Aligned_cols=105 Identities=17% Similarity=0.103 Sum_probs=78.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--ccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HREKI 131 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~~~~ 131 (268)
.++.+|||||||+|.+++.+|+..+...++|||+|+.++..++ +++. ..+. .+++++++|+.+++ +++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~--~~~~----~~~~--~~v~~~~~d~~~~~~~~~~~~ 111 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYAL--DKVL----EVGV--PNIKLLWVDGSDLTDYFEDGE 111 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH--HHHH----HHCC--SSEEEEECCSSCGGGTSCTTC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHH--HHHH----HcCC--CCEEEEeCCHHHHHhhcCCCC
Confidence 4678999999999999999999876656999999997555543 3333 2333 58999999999876 54443
Q ss_pred cceEEEEEeccccCcC---------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPT---------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~---------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|+++....++. ....+.++.++|||||.+++.
T Consensus 112 --~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 112 --IDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp --CSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred --CCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 56677763322221 256889999999999999875
No 93
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.57 E-value=8.6e-15 Score=124.08 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=79.2
Q ss_pred HHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-
Q psy17227 48 IDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE- 125 (268)
Q Consensus 48 l~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l- 125 (268)
++.+++.++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+ +..+.+.+++ ..+++++++|+.+.
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~--i~~~~~~a~~--------~~~v~~~~~d~~~~~ 139 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS--GRDLINLAKK--------RTNIIPVIEDARHPH 139 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHH--HHHHHHHHHH--------CTTEEEECSCTTCGG
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHH--HHHHHHHhhc--------cCCeEEEEcccCChh
Confidence 3456788999999999999999999999873 3469999999863 3334444432 25899999999984
Q ss_pred --cccccccceEEEEEeccccCcCH-HHHHHHHHhcCCCCcEEEEe
Q psy17227 126 --EHREKITQASIVFVNNFAFGPTV-DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 --~~~~~~~d~dvv~~~~~~~~~~~-~~~l~e~~r~LkpGG~~i~~ 168 (268)
++.+ ..+|+|+++.. .++. ...+.++.++|||||++++.
T Consensus 140 ~~~~~~--~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 140 KYRMLI--AMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp GGGGGC--CCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccC--CcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 3333 34688888644 3333 34478899999999999985
No 94
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=4.6e-15 Score=126.51 Aligned_cols=106 Identities=12% Similarity=0.047 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-c
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-K 130 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-~ 130 (268)
.+.++.+|||||||+|.+++.+|...+..+|+|||+|+.++..++ ++++ ..+. .+++++++|+.++++.. .
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~--~~v~~~~~d~~~~~~~~~~ 138 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLE--KLSE----ALQL--ENTTFCHDRAETFGQRKDV 138 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHH----HHTC--SSEEEEESCHHHHTTCTTT
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH--HHHH----HcCC--CCEEEEeccHHHhcccccc
Confidence 446788999999999999999987655556999999998555544 3332 2343 37999999998876531 1
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+|+|++..+ .+....+.++.++|||||++++.
T Consensus 139 ~~~fD~V~~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 139 RESYDIVTARAV---ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TTCEEEEEEECC---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCccEEEEecc---CCHHHHHHHHHHhcCCCCEEEEE
Confidence 124688888653 67888999999999999999986
No 95
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.57 E-value=2.2e-14 Score=121.73 Aligned_cols=117 Identities=14% Similarity=0.231 Sum_probs=84.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.....+...+...++.+|||||||+|..++.+|+..+..+|+|+|+|+.++..++ ++++ ..+. ..+++++++|
T Consensus 58 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~~d 130 (232)
T 3ntv_A 58 LTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAK--QNLA----TYHF-ENQVRIIEGN 130 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHH--HHHH----HTTC-TTTEEEEESC
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEECC
Confidence 3334444445566888999999999999999988655556999999997555443 3333 3343 2489999999
Q ss_pred CCCC-c-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 122 FLTE-E-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 122 ~~~l-~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+.+. + ..+ ..+|+|+++.. .......+.++.+.|||||++++.+
T Consensus 131 ~~~~~~~~~~--~~fD~V~~~~~--~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 131 ALEQFENVND--KVYDMIFIDAA--KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp GGGCHHHHTT--SCEEEEEEETT--SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHhhcc--CCccEEEEcCc--HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 9874 3 222 34678887643 4567788999999999999999853
No 96
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.57 E-value=2.1e-14 Score=118.47 Aligned_cols=104 Identities=10% Similarity=0.106 Sum_probs=78.5
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhC--CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATG--CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~--~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
+..+++.++ ++++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+ ...+++++++
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-------------------~~~~v~~~~~ 70 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-------------------PIPNVYFIQG 70 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-------------------CCTTCEEEEC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-------------------CCCCceEEEc
Confidence 445666665 57889999999999999999998876 4569999999830 1247899999
Q ss_pred CCCCCc-------------------------ccccccceEEEEEeccccC-----cCHH-------HHHHHHHhcCCCCc
Q psy17227 121 DFLTEE-------------------------HREKITQASIVFVNNFAFG-----PTVD-------HALKERFQDLKDGA 163 (268)
Q Consensus 121 D~~~l~-------------------------~~~~~~d~dvv~~~~~~~~-----~~~~-------~~l~e~~r~LkpGG 163 (268)
|+.+.+ +++ ..+|+|+++...++ .+.. ..+.+++++|||||
T Consensus 71 d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG 148 (201)
T 2plw_A 71 EIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQD--KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGG 148 (201)
T ss_dssp CTTTTSSCCC-----------CHHHHHHHHHHTT--CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred cccchhhhhhccccccccccchhhHHHHHhhcCC--CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCC
Confidence 998876 332 24688888765443 2222 36788999999999
Q ss_pred EEEEe
Q psy17227 164 RIVSS 168 (268)
Q Consensus 164 ~~i~~ 168 (268)
+|++.
T Consensus 149 ~lv~~ 153 (201)
T 2plw_A 149 TYIVK 153 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 97
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=1.4e-14 Score=130.63 Aligned_cols=106 Identities=22% Similarity=0.288 Sum_probs=80.9
Q ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 51 INATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
..+.++.+|||||||+|.++..+++. |..+|+|+|+|+ ++..|+ ++++ ..+. ..+++++++|+.++++++.
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~~~ 132 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAV--KIVK----ANKL-DHVVTIIKGKVEEVELPVE 132 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHH--HHHH----HTTC-TTTEEEEESCTTTCCCSSS
T ss_pred cccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHH--HHHH----HcCC-CCcEEEEECcHHHccCCCC
Confidence 34568899999999999999988876 776799999995 555543 3332 2343 2469999999999987654
Q ss_pred ccceEEEEEecc----ccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 131 ITQASIVFVNNF----AFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 131 ~~d~dvv~~~~~----~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
.+|+|+++.. .+...+...+.++.|+|||||+++.
T Consensus 133 --~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 133 --KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp --CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred --ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 4677887543 3446788889999999999999974
No 98
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.57 E-value=9.5e-15 Score=124.76 Aligned_cols=112 Identities=15% Similarity=0.243 Sum_probs=82.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..++..+...++.+|||||||+|.++..+++. +.. |+|+|+|+.++..++ +++. ..+ .+++++++|+
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~-v~gvD~s~~~l~~a~--~~~~----~~~---~~v~~~~~d~ 97 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYE-VVGLDLHEEMLRVAR--RKAK----ERN---LKIEFLQGDV 97 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----HTT---CCCEEEESCG
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCe-EEEEECCHHHHHHHH--HHHH----hcC---CceEEEECCh
Confidence 3455667766778899999999999999998875 665 999999997555543 3332 122 3799999999
Q ss_pred CCCcccccccceEEEEEe-c-ccc-C-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVN-N-FAF-G-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~-~-~~~-~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+++++ . .+|+|++. + ..+ . ++....++++.++|||||++++.
T Consensus 98 ~~~~~~-~--~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 98 LEIAFK-N--EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGCCCC-S--CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccC-C--CccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 988764 2 45777753 2 222 2 35678899999999999999874
No 99
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=9.4e-15 Score=125.73 Aligned_cols=105 Identities=13% Similarity=0.017 Sum_probs=81.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-cc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-KI 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-~~ 131 (268)
..++.+|||||||+|.+++.+|...+..+|+|||+|+.++..++ ++++ ..+. .+++++++|+++++..+ ..
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~l--~~v~~~~~d~~~~~~~~~~~ 149 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVE--RAIE----VLGL--KGARALWGRAEVLAREAGHR 149 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHH----HHTC--SSEEEEECCHHHHTTSTTTT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH--HHHH----HhCC--CceEEEECcHHHhhcccccC
Confidence 46788999999999999999998877667999999998555544 3333 2343 36999999998876421 11
Q ss_pred cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++.++ .++...+..+.++|||||++++.
T Consensus 150 ~~fD~I~s~a~---~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 150 EAYARAVARAV---APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp TCEEEEEEESS---CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCceEEEECCc---CCHHHHHHHHHHHcCCCeEEEEE
Confidence 35788888765 45678889999999999999975
No 100
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.56 E-value=9.5e-15 Score=123.43 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=79.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.++.... .++.+|||||||+|.++..+++..+ +++|+|+|+.++..++ ++ ..+++++++|+.++
T Consensus 32 ~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~--~~-----------~~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 32 DLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHAR--KR-----------LPDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHH--HH-----------CTTCEEEECCTTTC
T ss_pred HHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHH--Hh-----------CCCCEEEECCHHHc
Confidence 3444332 6788999999999999999988754 4999999997544433 11 24799999999998
Q ss_pred cccccccceEEEEE-e-ccccC---cCHHHHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 126 EHREKITQASIVFV-N-NFAFG---PTVDHALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 126 ~~~~~~~d~dvv~~-~-~~~~~---~~~~~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
++ +. .+|+|++ . .+.|. .+....++++.++|||||++++..+..
T Consensus 96 ~~-~~--~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 96 RL-GR--KFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp CC-SS--CEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred cc-CC--CCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 76 33 4677774 4 33455 446778999999999999999974433
No 101
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.56 E-value=8.5e-15 Score=126.27 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=82.5
Q ss_pred HHHHcCCC-CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINAT-PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+...+.+. ++.+|||+|||+|.++..+|+..+. +|+|+|+++.++..++ +++. ..+. ..+++++++|+.++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~--~n~~----~~~~-~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAK--RSVA----YNQL-EDQIEIIEYDLKKI 111 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHH--HHHH----HTTC-TTTEEEECSCGGGG
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHH--HHHH----HCCC-cccEEEEECcHHHh
Confidence 44556788 8999999999999999998887554 5999999997555543 3333 2333 24799999999987
Q ss_pred cccccccceEEEEEeccccCc---------------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNFAFGP---------------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~~~~~---------------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.......+|+|++|..++.. +....+..+.++|||||++++.
T Consensus 112 ~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 112 TDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 631112357889987654332 2356788999999999999975
No 102
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.56 E-value=1.1e-14 Score=128.93 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc-----ccccEEEEEcCCCCCc--
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK-----RHGEFRLVKGDFLTEE-- 126 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~-----~~~~i~~~~gD~~~l~-- 126 (268)
.++.+|||||||+|.++..+++. +...++|+|+|+.++..++ +++.. .+. ...+++++++|+.+++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~--~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQ--QRYED----MKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHH--HHHHH----HHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHH--HHHHH----hhhcccccccceEEEEEecccccchh
Confidence 47889999999999999988874 4446999999997555443 33321 110 1237999999999986
Q ss_pred --ccccccceEEEEEeccccC-----cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 --HREKITQASIVFVNNFAFG-----PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 --~~~~~~d~dvv~~~~~~~~-----~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++....+|+|+++..+|+ ++....+.++.++|||||.++++
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 4332235788888766544 23568899999999999999986
No 103
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.56 E-value=7.7e-15 Score=121.79 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..++... +.++.+|||||||+|.++..+++. +..+++|+|+|+.++..++ +++. ...+++++++|+
T Consensus 31 ~~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~--~~~~--------~~~~i~~~~~d~ 98 (215)
T 2pxx_A 31 SFRALLEPE-LRPEDRILVLGCGNSALSYELFLG-GFPNVTSVDYSSVVVAAMQ--ACYA--------HVPQLRWETMDV 98 (215)
T ss_dssp HHHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHT-TCCCEEEEESCHHHHHHHH--HHTT--------TCTTCEEEECCT
T ss_pred HHHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHc-CCCcEEEEeCCHHHHHHHH--Hhcc--------cCCCcEEEEcch
Confidence 345555443 478889999999999999998876 4425999999987444433 2211 125899999999
Q ss_pred CCCcccccccceEEEEEecccc----------------CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAF----------------GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~----------------~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++++++. .+|+|+++..++ ..+....+.++.++|||||++++.
T Consensus 99 ~~~~~~~~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 99 RKLDFPSA--SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp TSCCSCSS--CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCCCCC--cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 99887654 467777765431 234577899999999999999986
No 104
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.56 E-value=5.7e-14 Score=127.32 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=88.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+++.++.+|||||||+|.++..+++.++..+++++|+ +.++..++ +++. ..+. ..+++|+.+|+.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~----~~~l-~~~v~~~~~d~~- 262 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEAR--ELLT----GRGL-ADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHH--HHHH----HTTC-TTTEEEEECCTT-
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHH--Hhhh----hcCc-CCceEEeccCCC-
Confidence 4567777888899999999999999999999887667999999 76444433 3332 2333 258999999998
Q ss_pred CcccccccceEEEEEeccc-cCcCHH--HHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 125 EEHREKITQASIVFVNNFA-FGPTVD--HALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~-~~~~~~--~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
.+++. .+|+|++.+++ ++++.. ..+++++++|||||++++.+...+.
T Consensus 263 ~~~p~---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 263 ETIPD---GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp TCCCS---SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred CCCCC---CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 44443 35677776664 455543 6899999999999999988655443
No 105
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.55 E-value=1.8e-14 Score=128.51 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=85.0
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+++.+++.++.+|||||||+|..+..+++.++..+++++|+ +.++..++ +++. ..+. ..+++|+.+|+. .+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~-~~ 231 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAH--RRFL----DTGL-SGRAQVVVGSFF-DP 231 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHH--HHHH----HTTC-TTTEEEEECCTT-SC
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHH--Hhhh----hcCc-CcCeEEecCCCC-CC
Confidence 44455667788999999999999999999887767999999 76444333 3332 2333 258999999997 34
Q ss_pred ccccccceEEEEEeccc-cCcC--HHHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 127 HREKITQASIVFVNNFA-FGPT--VDHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~~-~~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
++. .+|+|++.+++ ++++ ....+++++++|||||++++.+...+.
T Consensus 232 ~p~---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 232 LPA---GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp CCC---SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred CCC---CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 433 45677776664 5665 377899999999999999998665543
No 106
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.55 E-value=1e-14 Score=122.11 Aligned_cols=104 Identities=18% Similarity=0.159 Sum_probs=79.6
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT- 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~- 124 (268)
.+++.+. .++.+|||||||+|.++..+++. +. +++|+|+|+.++..++ + ...+++++|+.+
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~-~~~~~D~~~~~~~~~~------~---------~~~~~~~~d~~~~ 85 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GT-RVSGIEAFPEAAEQAK------E---------KLDHVVLGDIETM 85 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TC-EEEEEESSHHHHHHHH------T---------TSSEEEESCTTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CC-eEEEEeCCHHHHHHHH------H---------hCCcEEEcchhhc
Confidence 4555655 78899999999999999998876 64 5999999986433332 1 124789999987
Q ss_pred -CcccccccceEEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 -EEHREKITQASIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 -l~~~~~~~d~dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
.+++++ .+|+|+++.. .|.+++...+.++.++|||||.+++..
T Consensus 86 ~~~~~~~--~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 86 DMPYEEE--QFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp CCCSCTT--CEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CCCCCCC--ccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 455444 4567776655 577889999999999999999999863
No 107
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=6.9e-15 Score=122.38 Aligned_cols=120 Identities=16% Similarity=0.094 Sum_probs=84.9
Q ss_pred cCcHHHHHHHHHHcCCC-CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEE
Q psy17227 38 ETSFDLISRMIDQINAT-PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFR 116 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 116 (268)
++.......+++.+... ++.+|||+|||+|.+++.++.. +..+|+|+|+|+.++..++ ++++ ..+. .+++
T Consensus 36 p~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~-~~~~V~~vD~s~~~l~~a~--~~~~----~~~~--~~v~ 106 (202)
T 2fpo_A 36 PTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSR-YAAGATLIEMDRAVSQQLI--KNLA----TLKA--GNAR 106 (202)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHH--HHHH----HTTC--CSEE
T ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhc-CCCEEEEEECCHHHHHHHH--HHHH----HcCC--CcEE
Confidence 34444455566655443 7889999999999999987765 5546999999998655544 3333 2332 4899
Q ss_pred EEEcCCCC-CcccccccceEEEEEeccccCcCHHHHHHHHHh--cCCCCcEEEEe
Q psy17227 117 LVKGDFLT-EEHREKITQASIVFVNNFAFGPTVDHALKERFQ--DLKDGARIVSS 168 (268)
Q Consensus 117 ~~~gD~~~-l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r--~LkpGG~~i~~ 168 (268)
++++|+.+ ++..+ ..+|+|+++..++.......+..+.+ +|||||++++.
T Consensus 107 ~~~~D~~~~~~~~~--~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 107 VVNSNAMSFLAQKG--TPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp EECSCHHHHHSSCC--CCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred EEECCHHHHHhhcC--CCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEE
Confidence 99999977 34322 24688988877666667778888864 69999999875
No 108
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.55 E-value=2.1e-14 Score=122.48 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=81.0
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHH----hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAA----TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~----~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
...+...+...++.+|||||||+|..+..+|+. .+..+|+|||+|+.++..++ +. ..++++++
T Consensus 70 ~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------------~~-~~~v~~~~ 136 (236)
T 2bm8_A 70 QAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------------SD-MENITLHQ 136 (236)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------------GG-CTTEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------------cc-CCceEEEE
Confidence 333444444456789999999999999999886 34456999999998655543 11 25899999
Q ss_pred cCCCCC---cccccccceEEEEEeccccCcCHHHHHHHHHh-cCCCCcEEEEeC
Q psy17227 120 GDFLTE---EHREKITQASIVFVNNFAFGPTVDHALKERFQ-DLKDGARIVSSK 169 (268)
Q Consensus 120 gD~~~l---~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r-~LkpGG~~i~~~ 169 (268)
+|+.++ +..+. ..+|+|+++.. | .+....+.++.| +|||||++++.+
T Consensus 137 gD~~~~~~l~~~~~-~~fD~I~~d~~-~-~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 137 GDCSDLTTFEHLRE-MAHPLIFIDNA-H-ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CCSSCSGGGGGGSS-SCSSEEEEESS-C-SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CcchhHHHHHhhcc-CCCCEEEECCc-h-HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999985 54332 13567777665 4 377888999997 999999999963
No 109
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=4.3e-14 Score=119.14 Aligned_cols=112 Identities=17% Similarity=0.197 Sum_probs=80.1
Q ss_pred HHHHHHcCCCCCCEEEEEcCC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..++....++++.+||||||| +|.++..+++..+. +|+|+|+|+.++..++ ++++ ..+. +++++++|+.
T Consensus 45 ~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~--~~~~----~~~~---~v~~~~~d~~ 114 (230)
T 3evz_A 45 RYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYAR--RNIE----RNNS---NVRLVKSNGG 114 (230)
T ss_dssp HHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHH--HHHH----HTTC---CCEEEECSSC
T ss_pred hhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHH--HHHH----HhCC---CcEEEeCCch
Confidence 334344457889999999999 99999999887644 4999999998555544 3333 2232 7999999975
Q ss_pred CC-cccccccceEEEEEeccccCcC--------------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TE-EHREKITQASIVFVNNFAFGPT--------------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l-~~~~~~~d~dvv~~~~~~~~~~--------------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ ++++ ..+|+|+++..++... ....+.++.++|||||++++.
T Consensus 115 ~~~~~~~--~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 115 IIKGVVE--GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp SSTTTCC--SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhccc--CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 43 2333 3578888886644322 366789999999999999975
No 110
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.55 E-value=6.8e-15 Score=130.10 Aligned_cols=105 Identities=5% Similarity=0.001 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc----cccEEEEEcCCC------C
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR----HGEFRLVKGDFL------T 124 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~----~~~i~~~~gD~~------~ 124 (268)
++.+|||||||+|..+..+++. +...|+|||+|+.|+..|+ +++.. .+.. .-+++|.++|+. +
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~--~~~~~----~~~~~~~~~~~~~f~~~d~~~d~~~~~ 120 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGN--ERYNK----LNSGIKTKYYKFDYIQETIRSDTFVSS 120 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHH--HHHHH----HCC----CCCEEEEEECCTTSSSHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHH--HHHHh----ccccccccccccchhhhhcccchhhhh
Confidence 5789999999999877666654 3345999999998666654 33321 1211 013778899883 2
Q ss_pred Cc--ccccccceEEEEEecccc----CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE--HREKITQASIVFVNNFAF----GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~--~~~~~~d~dvv~~~~~~~----~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ ++++ .+|+|++...+| ..+....+++++++|||||+|+++
T Consensus 121 l~~~~~~~--~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 121 VREVFYFG--KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp HHTTCCSS--CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccccCC--CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 22 2233 467777654433 246778899999999999999976
No 111
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.55 E-value=2.8e-14 Score=124.42 Aligned_cols=117 Identities=12% Similarity=0.159 Sum_probs=81.8
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCC---CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 43 LISRMIDQIN-ATPDDVFVDLGSGV---GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 43 ~~~~ll~~l~-~~~~~~vLDiGCG~---G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
.+.+++..+. .....+|||||||+ |.++..+++..+..+|+|+|+|+.|+..++ +++. ...+++++
T Consensus 64 ~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar--~~~~--------~~~~v~~~ 133 (274)
T 2qe6_A 64 VLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGR--ALLA--------KDPNTAVF 133 (274)
T ss_dssp HHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHH--HHHT--------TCTTEEEE
T ss_pred HHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHH--HhcC--------CCCCeEEE
Confidence 3445555554 33457999999999 998876666555556999999997555544 2221 13589999
Q ss_pred EcCCCCCccc-------c--cccceEEEEEecc-ccCcC--HHHHHHHHHhcCCCCcEEEEeC
Q psy17227 119 KGDFLTEEHR-------E--KITQASIVFVNNF-AFGPT--VDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 119 ~gD~~~l~~~-------~--~~~d~dvv~~~~~-~~~~~--~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
++|+.+.+.. + +...+|+|+++.+ +|.++ ....+++++++|||||+|++++
T Consensus 134 ~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 134 TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999875310 0 1113567777665 45555 8889999999999999999873
No 112
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.55 E-value=2.9e-14 Score=120.17 Aligned_cols=115 Identities=16% Similarity=0.219 Sum_probs=81.4
Q ss_pred HHHHHH---HHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 42 DLISRM---IDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 42 ~~~~~l---l~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
.....+ ++.+++.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.++.. ++++++ ...++++
T Consensus 57 ~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~--~~~~~~--------~~~~v~~ 126 (227)
T 1g8a_A 57 KLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRE--LVPIVE--------ERRNIVP 126 (227)
T ss_dssp HHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHH--HHHHHS--------SCTTEEE
T ss_pred hHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHH--HHHHHh--------ccCCCEE
Confidence 334555 3445588999999999999999999998864 3469999999874333 323322 1258999
Q ss_pred EEcCCCCCccc-ccccceEEEEEeccccCcCHHHH-HHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHR-EKITQASIVFVNNFAFGPTVDHA-LKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~-~~~~d~dvv~~~~~~~~~~~~~~-l~e~~r~LkpGG~~i~~ 168 (268)
+++|+.+.+.. .....+|+|+++.. .++.... +.+++++|||||++++.
T Consensus 127 ~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 127 ILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999884311 11124788887644 3444444 89999999999999986
No 113
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.55 E-value=5.8e-15 Score=118.28 Aligned_cols=121 Identities=17% Similarity=0.145 Sum_probs=85.1
Q ss_pred cccCcHHHHHHHHHHcC--CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccc
Q psy17227 36 YGETSFDLISRMIDQIN--ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHG 113 (268)
Q Consensus 36 ~g~~~~~~~~~ll~~l~--~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 113 (268)
+.+........+++.+. +.++.+|||+|||+|.++..+++. +.. |+|+|+|+.++..++ ++++. .+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~~-v~~vD~~~~~~~~a~--~~~~~----~~~--- 88 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE-GWE-AVLVEKDPEAVRLLK--ENVRR----TGL--- 88 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT-TCE-EEEECCCHHHHHHHH--HHHHH----HTC---
T ss_pred CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC-CCe-EEEEeCCHHHHHHHH--HHHHH----cCC---
Confidence 44455555556666654 337889999999999999998875 555 999999997555544 33332 222
Q ss_pred cEEEEEcCCCCC-cc-cccccceEEEEEeccccCcCHHHHHHHHH--hcCCCCcEEEEe
Q psy17227 114 EFRLVKGDFLTE-EH-REKITQASIVFVNNFAFGPTVDHALKERF--QDLKDGARIVSS 168 (268)
Q Consensus 114 ~i~~~~gD~~~l-~~-~~~~~d~dvv~~~~~~~~~~~~~~l~e~~--r~LkpGG~~i~~ 168 (268)
+++++++|+.+. +. ......+|+|+++..++ ......+..+. ++|||||++++.
T Consensus 89 ~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 89 GARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred ceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 799999999873 32 11112478899887655 55666666666 999999999975
No 114
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.55 E-value=3.5e-14 Score=128.44 Aligned_cols=110 Identities=10% Similarity=0.027 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC--cccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE--EHREKI 131 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l--~~~~~~ 131 (268)
.+..+|||||||+|..+..+++.++..+++|+|+ +.++..+ ++++. ..+. ..+++|+.+|+.+. |++ .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a--~~~~~----~~~~-~~~v~~~~~d~~~~~~~~p-~- 247 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMM--RKQTA----GLSG-SERIHGHGANLLDRDVPFP-T- 247 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHH--HHHHT----TCTT-GGGEEEEECCCCSSSCCCC-C-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHH--HHHHH----hcCc-ccceEEEEccccccCCCCC-C-
Confidence 4668999999999999999999887767999999 7643333 23322 2232 24899999999985 454 2
Q ss_pred cceEEEEEecccc-CcC--HHHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 132 TQASIVFVNNFAF-GPT--VDHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 132 ~d~dvv~~~~~~~-~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
.+|+|++..++| +++ ....+++++++|||||++++.+.+.+.
T Consensus 248 -~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 248 -GFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp -CCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred -CcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 356777766654 444 356799999999999999988665543
No 115
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=1.9e-14 Score=121.68 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
..+..++...+.+++.+|||||||+|..++.+|+..+ ..+|+|||+|+.++..++ ++++ ..|....+++++++
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAK--ALFR----EAGYSPSRVRFLLS 116 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHH--HHHH----HTTCCGGGEEEECS
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCCCcCcEEEEEc
Confidence 3445555555656667999999999999999998764 446999999997555443 4333 34543258999999
Q ss_pred CCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
|+.+.........+|+|++... ..+....+.++++.|||||++++.+
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVS--PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCC--TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CHHHHHHHhcCCCcCeEEEcCc--HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 9876421110135788888643 3456778999999999999999963
No 116
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.55 E-value=9.1e-14 Score=123.91 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=87.6
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
...+++.+++.+ .+|||||||+|..+..+++.++..+++|+|+ +.++..++ +++. ..+. ..+++++++|+.
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~ 227 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVAR--DNLS----SLLA-GERVSLVGGDML 227 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHH--HHTH----HHHH-TTSEEEEESCTT
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHH--HHHh----hcCC-CCcEEEecCCCC
Confidence 455777777777 8999999999999999998876667999999 88666654 3222 1222 247999999998
Q ss_pred CCcccccccceEEEEEeccc-cCcCHH--HHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 124 TEEHREKITQASIVFVNNFA-FGPTVD--HALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~-~~~~~~--~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
+ +++ . .+|+|++..++ ++++.. ..+++++++|||||++++.+...+
T Consensus 228 ~-~~~-~--~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 228 Q-EVP-S--NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp T-CCC-S--SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred C-CCC-C--CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 7 544 2 35677777665 455544 789999999999999998855543
No 117
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.55 E-value=2.7e-14 Score=128.30 Aligned_cols=117 Identities=12% Similarity=0.120 Sum_probs=88.3
Q ss_pred HHHHHcCCCC-CCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATP-DDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~-~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+++.+++.+ +.+|||||||+|.++..+++.++..+++++|+ +.++..++ +++. ..+. ..+++++.+|+.+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAAR--KTIH----AHDL-GGRVEFFEKNLLD 240 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHH--HHHH----HTTC-GGGEEEEECCTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHH--HHHH----hcCC-CCceEEEeCCccc
Confidence 5677777777 89999999999999999999887767999999 65444433 3332 2333 2479999999998
Q ss_pred Cc--ccccccceEEEEEeccc-cCcC--HHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 125 EE--HREKITQASIVFVNNFA-FGPT--VDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 125 l~--~~~~~~d~dvv~~~~~~-~~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
.+ .+. .+|+|++..++ ++++ ....++++.++|||||++++.+...+
T Consensus 241 ~~~~~~~---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 241 ARNFEGG---AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp GGGGTTC---CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CcccCCC---CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 76 332 36788877665 4554 37789999999999999998765544
No 118
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=7e-15 Score=126.67 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=78.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+..++..+- .++.+|||||||+|.++..+++. +.. ++|+|+|+.++..++ ++ . . .+ ++++|+.
T Consensus 44 ~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~gvD~s~~~l~~a~--~~--------~-~-~~--~~~~d~~ 106 (260)
T 2avn_A 44 IGSFLEEYL-KNPCRVLDLGGGTGKWSLFLQER-GFE-VVLVDPSKEMLEVAR--EK--------G-V-KN--VVEAKAE 106 (260)
T ss_dssp HHHHHHHHC-CSCCEEEEETCTTCHHHHHHHTT-TCE-EEEEESCHHHHHHHH--HH--------T-C-SC--EEECCTT
T ss_pred HHHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHc-CCe-EEEEeCCHHHHHHHH--hh--------c-C-CC--EEECcHH
Confidence 344444432 37889999999999999988875 554 999999997544443 11 1 1 12 8999999
Q ss_pred CCcccccccceEEEEEec-ccc-CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVNN-FAF-GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~-~~~-~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|++++. +|+|++.. +.| .+++...++++.++|||||++++.
T Consensus 107 ~~~~~~~~--fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 107 DLPFPSGA--FEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp SCCSCTTC--EEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HCCCCCCC--EEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEE
Confidence 98876554 56677654 444 477899999999999999999975
No 119
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=3.6e-14 Score=126.08 Aligned_cols=113 Identities=17% Similarity=0.208 Sum_probs=85.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
+.....+++.++++++++|||||||+|.++..+++..+. .+|+|+|+|+.++..++ ++++ ..+. .++++++
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~g~--~~v~~~~ 132 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK--RNVE----RLGI--ENVIFVC 132 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHH----HTTC--CSEEEEE
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHH--HHHH----HcCC--CCeEEEE
Confidence 456778889999999999999999999999999987663 46999999997554443 3332 2333 3699999
Q ss_pred cCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+.+.+..+. .+|+|++...++.-. .++.+.|||||++++.
T Consensus 133 ~d~~~~~~~~~--~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 133 GDGYYGVPEFS--PYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp SCGGGCCGGGC--CEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEE
T ss_pred CChhhccccCC--CeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEE
Confidence 99988554333 467788776543222 5778899999999986
No 120
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.54 E-value=3.8e-14 Score=128.95 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=83.4
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+...+.+.++.+|||||||+|.+++.+++. |..+|+|||+| .++..++ ++++ ..+. ..+++++++|+.+++
T Consensus 55 i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 55 VFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHAR--ALVK----ANNL-DHIVEVIEGSVEDIS 125 (376)
T ss_dssp HHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHH--HHHH----HTTC-TTTEEEEESCGGGCC
T ss_pred HHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHH--HHHH----HcCC-CCeEEEEECchhhcC
Confidence 444556788999999999999999988875 66569999999 7655544 3332 3343 246999999999988
Q ss_pred ccccccceEEEEEecccc----CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREKITQASIVFVNNFAF----GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~~~----~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ ..+|+|+++.+.+ ...+...+.++.+.|||||+++..
T Consensus 126 ~~---~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 LP---EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CS---SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cC---CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 65 3578888865422 245777889999999999999864
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.54 E-value=3.8e-14 Score=121.32 Aligned_cols=116 Identities=20% Similarity=0.144 Sum_probs=90.5
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHh-ccccccEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWY-GKRHGEFR 116 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~i~ 116 (268)
..+.....++..+++.++.+|||+|||+|.++..+++..+ ..+++|+|+|+.++..++ ++++ .. | ..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~--~~~~----~~~g--~~~v~ 151 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAE--RNVR----AFWQ--VENVR 151 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH--HHHH----HHCC--CCCEE
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH--HHHH----HhcC--CCCEE
Confidence 4455667788889999999999999999999999998753 456999999997544443 3333 22 3 35899
Q ss_pred EEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 117 LVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 117 ~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++++|+.+.++++. .+|+|+++ .++....+.++.++|||||++++.
T Consensus 152 ~~~~d~~~~~~~~~--~~D~v~~~----~~~~~~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 152 FHLGKLEEAELEEA--AYDGVALD----LMEPWKVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp EEESCGGGCCCCTT--CEEEEEEE----SSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEECchhhcCCCCC--CcCEEEEC----CcCHHHHHHHHHHhCCCCCEEEEE
Confidence 99999998766543 46778763 466778899999999999999986
No 122
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.54 E-value=2e-14 Score=130.63 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=86.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCC------CCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSG------VGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHG 113 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG------~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 113 (268)
.....+++..+. .++.+||||||| +|+.++.+++.+ +..+|+|||+|+.|. . ...
T Consensus 203 ~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~--------------~~~ 264 (419)
T 3sso_A 203 TPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---V--------------DEL 264 (419)
T ss_dssp HHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---G--------------CBT
T ss_pred HHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---h--------------cCC
Confidence 455667777765 345799999999 777777777764 555699999999741 0 135
Q ss_pred cEEEEEcCCCCCccc------ccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 114 EFRLVKGDFLTEEHR------EKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 114 ~i~~~~gD~~~l~~~------~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
+++|+++|+.++|+. ++ .+|+|+++..+++.+....|++++++|||||+|++.+..
T Consensus 265 rI~fv~GDa~dlpf~~~l~~~d~--sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 265 RIRTIQGDQNDAEFLDRIARRYG--PFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHC--CEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CcEEEEecccccchhhhhhcccC--CccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 899999999999876 33 467888887766678889999999999999999997543
No 123
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=2e-14 Score=123.28 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=81.1
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Ccccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEHRE 129 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~~~ 129 (268)
.+.++.+|||||||+|..+..+|+..+ ..+|+|+|+|+.++..++ ++++ ..+.. .+++++++|+.+ ++...
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~g~~-~~v~~~~~d~~~~l~~~~ 132 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVAR--ENLQ----LAGVD-QRVTLREGPALQSLESLG 132 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHH--HHHH----HTTCT-TTEEEEESCHHHHHHTCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCCC-CcEEEEEcCHHHHHHhcC
Confidence 556789999999999999999998765 456999999997544443 3333 34432 489999999976 34222
Q ss_pred cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 130 KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
....+|+|++.. ..++....+.++.+.|||||++++.+.+
T Consensus 133 ~~~~fD~V~~d~--~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 133 ECPAFDLIFIDA--DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SCCCCSEEEECS--CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCCCeEEEEECC--chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 212467788764 3445677899999999999999986443
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.54 E-value=6.3e-15 Score=127.61 Aligned_cols=110 Identities=11% Similarity=0.028 Sum_probs=77.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
..+..+++.+++.++.+|||||||+|.+++.+|+. +.. |+|||+|+.|+..++ +++. . + ++++|
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~-V~gvD~S~~ml~~Ar--~~~~---------~-~--~v~~~ 95 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GAS-VTVFDFSQRMCDDLA--EALA---------D-R--CVTID 95 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHTS---------S-S--CCEEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCE-EEEEECCHHHHHHHH--HHHH---------h-c--cceee
Confidence 34567888899999999999999999999999875 554 999999998555543 2211 1 1 34445
Q ss_pred CCCCcc---cccccceEEEEEeccc-cC--cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEH---REKITQASIVFVNNFA-FG--PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~---~~~~~d~dvv~~~~~~-~~--~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+++. .+....+|+|+++..+ |. ++....+.++.++| |||+++++
T Consensus 96 ~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 96 LLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp ECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred eeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 544433 1111245677777654 33 34667899999999 99999976
No 125
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=3.9e-14 Score=121.36 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=89.5
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
..+.....++..+++.++.+|||+|||+|.++..+++.. +..+++|+|+|+.++..++ ++++ ..+. ..++++
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~--~~~~----~~~~-~~~v~~ 149 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAW--ENIK----WAGF-DDRVTI 149 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH--HHHH----HHTC-TTTEEE
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHH--HHHH----HcCC-CCceEE
Confidence 445666788889999999999999999999999999884 3556999999997555443 3333 2343 235999
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++|+.+. +++. .+|+|++ +.++....+.++.++|||||++++.
T Consensus 150 ~~~d~~~~-~~~~--~~D~v~~----~~~~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 150 KLKDIYEG-IEEE--NVDHVIL----DLPQPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp ECSCGGGC-CCCC--SEEEEEE----CSSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred EECchhhc-cCCC--CcCEEEE----CCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999864 3333 4678886 3567778899999999999999976
No 126
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=1.7e-14 Score=117.65 Aligned_cols=105 Identities=24% Similarity=0.334 Sum_probs=79.9
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.++..+ +.++.+|||||||+|.++..++.. +.. ++|+|+|+.++..++ ++ ..+++++++|+.++
T Consensus 38 ~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~-v~~~D~~~~~~~~a~--~~-----------~~~~~~~~~d~~~~ 101 (195)
T 3cgg_A 38 RLIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHD-VLGTDLDPILIDYAK--QD-----------FPEARWVVGDLSVD 101 (195)
T ss_dssp HHHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HH-----------CTTSEEEECCTTTS
T ss_pred HHHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCc-EEEEcCCHHHHHHHH--Hh-----------CCCCcEEEcccccC
Confidence 455555 678899999999999999998876 554 999999987444332 11 23689999999998
Q ss_pred cccccccceEEEEEe-ccc-cC--cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVN-NFA-FG--PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~-~~~-~~--~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++++. .+|+|+++ .++ |. ++....+.++.++|||||++++.
T Consensus 102 ~~~~~--~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 102 QISET--DFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp CCCCC--CEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCC--ceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 76544 46778876 443 33 34577899999999999999985
No 127
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=2.8e-14 Score=118.32 Aligned_cols=114 Identities=16% Similarity=0.188 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHcC--CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 40 SFDLISRMIDQIN--ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 40 ~~~~~~~ll~~l~--~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
.......+++.+. +.++.+|||||||+|.++..+++ .+..+++|+|+|+.++..++ +++. ..+. .++++
T Consensus 43 ~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~--~~v~~ 113 (205)
T 3grz_A 43 NHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAE--ENAA----LNGI--YDIAL 113 (205)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHH--HHHH----HTTC--CCCEE
T ss_pred CCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHH--HHHH----HcCC--CceEE
Confidence 3444444554443 67889999999999999998876 56656999999997555443 3332 2332 24999
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++|+.+.+ + ..+|+|+++...+ .....++++.++|||||++++.
T Consensus 114 ~~~d~~~~~--~--~~fD~i~~~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 114 QKTSLLADV--D--GKFDLIVANILAE--ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp EESSTTTTC--C--SCEEEEEEESCHH--HHHHHGGGSGGGEEEEEEEEEE
T ss_pred EeccccccC--C--CCceEEEECCcHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 999998754 2 3567888875533 2466788889999999999985
No 128
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=1e-14 Score=123.57 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccce
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQA 134 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~ 134 (268)
++.+|||||||+|.++..+++. +.. ++|+|+|+.++..++ +++. ..+ .+++++++|+.+++++ + .+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~-~~~~D~s~~~~~~a~--~~~~----~~~---~~~~~~~~d~~~~~~~-~--~f 102 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKN-TWAVDLSQEMLSEAE--NKFR----SQG---LKPRLACQDISNLNIN-R--KF 102 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSE-EEEECSCHHHHHHHH--HHHH----HTT---CCCEEECCCGGGCCCS-C--CE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCc-EEEEECCHHHHHHHH--HHHh----hcC---CCeEEEecccccCCcc-C--Cc
Confidence 7789999999999999988775 554 999999997555443 3322 112 2799999999988765 3 46
Q ss_pred EEEEEec-c-ccC---cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 135 SIVFVNN-F-AFG---PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 135 dvv~~~~-~-~~~---~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+|++.. . .|. ++....++++.++|||||++++.
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 7777764 4 566 56788899999999999999974
No 129
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.53 E-value=3.6e-14 Score=128.37 Aligned_cols=114 Identities=19% Similarity=0.180 Sum_probs=85.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+++.++.+|||||||+|.++..+++.++..+++|+|+ +.++..++ +++. ..+. ..+++|+++|+.+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERAR--RRFA----DAGL-ADRVTVAEGDFFK 243 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHH--HHHH----HTTC-TTTEEEEECCTTS
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHH--HHHH----hcCC-CCceEEEeCCCCC
Confidence 4567777888899999999999999999999876556999999 76444433 3332 2333 2489999999976
Q ss_pred CcccccccceEEEEEeccc-cCcCH--HHHHHHHHhcCCCCcEEEEeCC
Q psy17227 125 EEHREKITQASIVFVNNFA-FGPTV--DHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~-~~~~~--~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
+++. .+|+|++..++ ++++. ...++++.++|||||++++.+.
T Consensus 244 -~~~~---~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 244 -PLPV---TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -CCSC---CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCCC---CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3332 26788887765 45554 4789999999999999998765
No 130
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.53 E-value=2.9e-14 Score=129.32 Aligned_cols=109 Identities=16% Similarity=0.226 Sum_probs=82.3
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.++..++ +.++.+|||||||+|..+..+++.++..+++++|+ +.++..++ ...+++|+.+|+.+
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------~~~~v~~~~~d~~~ 257 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP--------------AFSGVEHLGGDMFD 257 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------CCTTEEEEECCTTT
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh--------------hcCCCEEEecCCCC
Confidence 4555665 77789999999999999999999887777999999 54222211 23589999999987
Q ss_pred CcccccccceEEEEEecccc-CcC--HHHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 125 EEHREKITQASIVFVNNFAF-GPT--VDHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~-~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
|+++ .|+|++..++| +++ ....+++++++|||||++++.+...+.
T Consensus 258 -~~p~----~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 258 -GVPK----GDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp -CCCC----CSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred -CCCC----CCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 6543 26777776654 444 346799999999999999998665543
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.53 E-value=3.1e-14 Score=117.97 Aligned_cols=110 Identities=12% Similarity=0.118 Sum_probs=81.7
Q ss_pred HHHHHHcCCC---CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 45 SRMIDQINAT---PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 45 ~~ll~~l~~~---~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
..+++.+... ++.+|||||||+|.++..++...+..+++|+|+|+.++..++ +++. ..+. .+++++++|
T Consensus 52 ~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~--~~v~~~~~d 123 (207)
T 1jsx_A 52 RHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLR--QVQH----ELKL--ENIEPVQSR 123 (207)
T ss_dssp HHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHH--HHHH----HTTC--SSEEEEECC
T ss_pred HHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--HHHH----HcCC--CCeEEEecc
Confidence 3444444322 478999999999999999998776667999999997554443 3332 2332 359999999
Q ss_pred CCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+++. . ..+|+|+++.+ .+....+.++.+.|||||++++.
T Consensus 124 ~~~~~~-~--~~~D~i~~~~~---~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 124 VEEFPS-E--PPFDGVISRAF---ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp TTTSCC-C--SCEEEEECSCS---SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred hhhCCc-c--CCcCEEEEecc---CCHHHHHHHHHHhcCCCcEEEEE
Confidence 998762 2 24678887644 56778899999999999999986
No 132
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=9.2e-14 Score=125.11 Aligned_cols=112 Identities=17% Similarity=0.246 Sum_probs=84.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+.+.++.+|||||||+|.++..+++. |..+|+|+|+|+ +...+ +++++ ..+. ..+++++++|+.+
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a--~~~~~----~~~l-~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHA--EVLVK----SNNL-TDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHH--HHHHH----HTTC-TTTEEEEESCTTT
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHH--HHHHH----HcCC-CCcEEEEEcchhh
Confidence 45677777789999999999999999988774 665699999996 44433 33332 2343 2589999999999
Q ss_pred CcccccccceEEEEEecc-cc--CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNF-AF--GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~-~~--~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++++ .+|+|+++.. .| .++....+.++.+.|||||+++..
T Consensus 111 ~~~~~---~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 111 VSLPE---QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCSS---CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCCC---ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 87642 4688888754 33 345678888999999999999853
No 133
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.53 E-value=3.1e-14 Score=138.63 Aligned_cols=122 Identities=12% Similarity=0.091 Sum_probs=85.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 42 DLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 42 ~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
..+..+++.+...++.+|||||||+|.+++.+++..+ ..+|+|||+|+.|+..|+ +++............+++|+++
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AR--eRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAA--KMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHH--HHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHH--HHhhhccchhhcCCCceEEEEC
Confidence 3455567777667899999999999999999887653 245999999998665554 3222110000012348999999
Q ss_pred CCCCCcccccccceEEEEEec-cccCcCHH--HHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNN-FAFGPTVD--HALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~-~~~~~~~~--~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.++++.+..| |+|++.. +.|.++.. ..+.+++++|||| .++++
T Consensus 786 Da~dLp~~d~sF--DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 786 SILEFDSRLHDV--DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp CTTSCCTTSCSC--CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred chHhCCcccCCe--eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEE
Confidence 999999876655 4565554 45666544 5789999999999 66654
No 134
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=1.3e-13 Score=111.30 Aligned_cols=112 Identities=18% Similarity=0.313 Sum_probs=85.7
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
........+++.+++.++.+|||+|||+|.++..+++ +..+++|+|+|+.++..++ ++++ ..+. .+++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~--~~~~----~~~~--~~~~~~ 88 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTK--QNLA----KFNI--KNCQII 88 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHH--HHHH----HTTC--CSEEEE
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHH--HHHH----HcCC--CcEEEE
Confidence 4455667788888889999999999999999998887 4445999999997554443 3332 2332 479999
Q ss_pred EcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+.+ ++++. .+|+|+++.. .+....+.++.+. |||++++.
T Consensus 89 ~~d~~~-~~~~~--~~D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 89 KGRAED-VLDKL--EFNKAFIGGT---KNIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp ESCHHH-HGGGC--CCSEEEECSC---SCHHHHHHHHHHT--TCCEEEEE
T ss_pred ECCccc-cccCC--CCcEEEECCc---ccHHHHHHHHhhC--CCCEEEEE
Confidence 999987 65543 4567887655 6778888898888 99999986
No 135
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.53 E-value=9.8e-15 Score=123.24 Aligned_cols=104 Identities=8% Similarity=-0.036 Sum_probs=78.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
...+..++..+ +.++.+|||||||+|.++..+++. +. +|+|+|+|+.++..++ + . ..+++++++
T Consensus 35 ~~l~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~------~----~---~~~~~~~~~ 98 (226)
T 3m33_A 35 ELTFDLWLSRL-LTPQTRVLEAGCGHGPDAARFGPQ-AA-RWAAYDFSPELLKLAR------A----N---APHADVYEW 98 (226)
T ss_dssp THHHHHHHHHH-CCTTCEEEEESCTTSHHHHHHGGG-SS-EEEEEESCHHHHHHHH------H----H---CTTSEEEEC
T ss_pred HHHHHHHHHhc-CCCCCeEEEeCCCCCHHHHHHHHc-CC-EEEEEECCHHHHHHHH------H----h---CCCceEEEc
Confidence 34445555443 367899999999999999998876 55 4999999997444433 1 1 247999999
Q ss_pred CC-CCCccc-ccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 121 DF-LTEEHR-EKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 121 D~-~~l~~~-~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
|+ ..+|++ +. .+|+|+++ .++...++++.++|||||+++.
T Consensus 99 d~~~~~~~~~~~--~fD~v~~~-----~~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 99 NGKGELPAGLGA--PFGLIVSR-----RGPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp CSCSSCCTTCCC--CEEEEEEE-----SCCSGGGGGHHHHEEEEEEEEE
T ss_pred chhhccCCcCCC--CEEEEEeC-----CCHHHHHHHHHHHcCCCcEEEE
Confidence 99 467765 44 46778776 4677889999999999999993
No 136
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.52 E-value=2.3e-14 Score=128.90 Aligned_cols=114 Identities=17% Similarity=0.200 Sum_probs=83.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+++.+++.++.+|||||||+|..+..+++.++..+++++|+++. +.+ ++ ....+. ..+++|+++|+. .
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~---~~~--~~----~~~~~~-~~~v~~~~~d~~-~ 243 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEV---VAR--HR----LDAPDV-AGRWKVVEGDFL-R 243 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHH---HTT--CC----CCCGGG-TTSEEEEECCTT-T
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHH---hhc--cc----ccccCC-CCCeEEEecCCC-C
Confidence 577788888999999999999999999999887767999999542 111 10 011122 247999999997 3
Q ss_pred cccccccceEEEEEecc-ccCcCH--HHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 126 EHREKITQASIVFVNNF-AFGPTV--DHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~~~~~--~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
+++ .+|+|++..+ +++++. ...+++++++|||||++++.+...+.
T Consensus 244 ~~p----~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 244 EVP----HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp CCC----CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CCC----CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 333 3566766655 456665 68899999999999999988655443
No 137
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.52 E-value=1e-13 Score=124.87 Aligned_cols=121 Identities=14% Similarity=0.049 Sum_probs=90.4
Q ss_pred cCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEE
Q psy17227 38 ETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFR 116 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 116 (268)
++.+.....++..+++.++.+|||+|||+|.+++.+|... +...++|+|+|+.++..|+ ++++ ..|. .+++
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~--~n~~----~~g~--~~i~ 257 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAR--EAAL----ASGL--SWIR 257 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHH--HHHH----HTTC--TTCE
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHH--HHHH----HcCC--CceE
Confidence 3445556678888899999999999999999999999877 3445999999998666554 4433 2343 2899
Q ss_pred EEEcCCCCCcccccccceEEEEEeccccCc-----C----HHHHHHHHHhcCCCCcEEEEe
Q psy17227 117 LVKGDFLTEEHREKITQASIVFVNNFAFGP-----T----VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 117 ~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~-----~----~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+++|+.+++.+... +|+|++|..+... + ....+.++.++|||||++++.
T Consensus 258 ~~~~D~~~~~~~~~~--~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 258 FLRADARHLPRFFPE--VDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp EEECCGGGGGGTCCC--CSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred EEeCChhhCccccCC--CCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999998865443 4788887654321 1 145677888999999999875
No 138
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=1.1e-13 Score=112.41 Aligned_cols=118 Identities=21% Similarity=0.322 Sum_probs=87.9
Q ss_pred cCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 38 ETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
.........+++.+++.++.+|||+|||+|.++..+++.. .+++|+|+|+.++..++ +++. ..+. ..++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~--~~~~----~~~~-~~~~~~ 86 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTE--MNLQ----RHGL-GDNVTL 86 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHH--HHHH----HTTC-CTTEEE
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHH--HHHH----HcCC-CcceEE
Confidence 4555666678888899999999999999999999888754 45999999997544443 3332 2332 258999
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++|+.+ ++++ ...+|+|+++... .+....+.++.++|||||++++.
T Consensus 87 ~~~d~~~-~~~~-~~~~D~v~~~~~~--~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 87 MEGDAPE-ALCK-IPDIDIAVVGGSG--GELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp EESCHHH-HHTT-SCCEEEEEESCCT--TCHHHHHHHHHHTEEEEEEEEEE
T ss_pred EecCHHH-hccc-CCCCCEEEECCch--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999876 3322 1256888876543 35688899999999999999986
No 139
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.52 E-value=3.4e-15 Score=137.22 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=81.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||||||+|.++..+++. +.. |+|+|+|+.++..++ + .+.......|..++.
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~-v~gvD~s~~~~~~a~------~----~~~~~~~~~~~~~~~ 162 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVR-HLGFEPSSGVAAKAR------E----KGIRVRTDFFEKATA 162 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCE-EEEECCCHHHHHHHH------T----TTCCEECSCCSHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCc-EEEECCCHHHHHHHH------H----cCCCcceeeechhhH
Confidence 3455778888889999999999999999998874 554 999999987444433 1 121111122334555
Q ss_pred CCCcccccccceEEEEEec-cccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNN-FAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~-~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++|++++. +|+|++.. +.|.+++...+++++++|||||++++.
T Consensus 163 ~~l~~~~~~--fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 163 DDVRRTEGP--ANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHHHHHHCC--EEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccCCCC--EEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 556665554 45666554 468899999999999999999999986
No 140
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=4.6e-14 Score=121.99 Aligned_cols=113 Identities=13% Similarity=0.118 Sum_probs=82.8
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHH---hccccccEEEEEcCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQW---YGKRHGEFRLVKGDFL 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~---~~~~~~~i~~~~gD~~ 123 (268)
+...+...++.+|||||||+|.+++.++...+..+|+|||+++.++..++ +++. . .+. ..+++++++|+.
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~--~n~~----~~~~~~l-~~~v~~~~~D~~ 100 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFAR--RSLE----LPDNAAF-SARIEVLEADVT 100 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHH--HHTT----SGGGTTT-GGGEEEEECCTT
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH--HHHH----hhhhCCC-cceEEEEeCCHH
Confidence 44566778889999999999999999998876556999999997555544 2221 2 222 236999999999
Q ss_pred CCc-------ccccccceEEEEEeccccCc-------------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE-------HREKITQASIVFVNNFAFGP-------------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~-------~~~~~~d~dvv~~~~~~~~~-------------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++. +++ ..+|+|++|..++.. .....+..+.+.|||||+|++.
T Consensus 101 ~~~~~~~~~~~~~--~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 101 LRAKARVEAGLPD--EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp CCHHHHHHTTCCT--TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhhhhhhhccCC--CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 872 222 247889988554432 2567788999999999999875
No 141
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.52 E-value=9.7e-14 Score=124.98 Aligned_cols=115 Identities=18% Similarity=0.158 Sum_probs=86.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+++.+++.++.+|||||||+|.++..+++..+..+++++|+ +.++..++ +++. ..+. ..+++|+++|+.+
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTAR--SYLK----DEGL-SDRVDVVEGDFFE 244 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHH--HHHH----HTTC-TTTEEEEECCTTS
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHH--HHHH----hcCC-CCceEEEeCCCCC
Confidence 3467777888899999999999999999998876556999999 77544443 3332 2333 2489999999976
Q ss_pred CcccccccceEEEEEeccc-cCcCH--HHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 125 EEHREKITQASIVFVNNFA-FGPTV--DHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~-~~~~~--~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
+++. .+|+|++..++ ++++. ...++++.++|||||++++.+..
T Consensus 245 -~~~~---~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 245 -PLPR---KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -CCSS---CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCCC---CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 3332 36788877664 45554 47899999999999999987555
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=9.8e-14 Score=126.21 Aligned_cols=117 Identities=11% Similarity=0.041 Sum_probs=86.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc-cccEEEEEcC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR-HGEFRLVKGD 121 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~i~~~~gD 121 (268)
....+++.+...++.+|||+|||+|.+++.+++..+..+|+|+|+|+.++..++ +++. ..+.. ..+++|+++|
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar--~n~~----~ngl~~~~~v~~~~~D 283 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR--LNVE----TNMPEALDRCEFMINN 283 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHH----HHCGGGGGGEEEEECS
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHH--HHHH----HcCCCcCceEEEEech
Confidence 345578888888889999999999999999999875566999999997555544 3333 22322 1369999999
Q ss_pred CCCCcccccccceEEEEEeccccC-----cC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFG-----PT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~-----~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+ ++++ ..+|+|+++..+|. .. ....+.++.++|||||++++.
T Consensus 284 ~~~-~~~~--~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 284 ALS-GVEP--FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TTT-TCCT--TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhc-cCCC--CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 987 3333 25788998877653 11 235689999999999999975
No 143
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.51 E-value=6e-14 Score=121.80 Aligned_cols=119 Identities=16% Similarity=0.154 Sum_probs=90.8
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHh-ccccccEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWY-GKRHGEFR 116 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~i~ 116 (268)
..+.....++..+++.++.+|||+|||+|.++..+++..+ ..+++|+|+|+.++..++ +++. .. |....+++
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~g~~~~~v~ 156 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHAR--RNVS----GCYGQPPDNWR 156 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH--HHHH----HHHTSCCTTEE
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH--HHHH----HhcCCCCCcEE
Confidence 4456677888899999999999999999999999998653 456999999997554443 3333 22 21124899
Q ss_pred EEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 117 LVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 117 ~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
++++|+.+.++++. .+|+|+++ .+++...+.++.++|||||++++..
T Consensus 157 ~~~~d~~~~~~~~~--~~D~v~~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 157 LVVSDLADSELPDG--SVDRAVLD----MLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EECSCGGGCCCCTT--CEEEEEEE----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEECchHhcCCCCC--ceeEEEEC----CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 99999998776543 46778774 3566788999999999999999863
No 144
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=3.3e-14 Score=123.66 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=80.3
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHH-hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHh-ccccccEEEEEcCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAA-TGCKICWGVEKADLPAKYAEMHTVFKRWMQWY-GKRHGEFRLVKGDF 122 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~i~~~~gD~ 122 (268)
..++..+++.++.+|||+|||+|.++..+++. .+..+|+|+|+|+.++..++ ++++ .. | ..+++++++|+
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~g--~~~v~~~~~d~ 171 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAM--DNLS----EFYD--IGNVRTSRSDI 171 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHH--HHHH----TTSC--CTTEEEECSCT
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHHH----hcCC--CCcEEEEECch
Confidence 35677788999999999999999999999987 34456999999997444433 3332 22 3 24899999999
Q ss_pred CCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ ++++. .+|+|++ +.+++...+.++.++|||||++++.
T Consensus 172 ~~-~~~~~--~fD~Vi~----~~~~~~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 172 AD-FISDQ--MYDAVIA----DIPDPWNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp TT-CCCSC--CEEEEEE----CCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred hc-cCcCC--CccEEEE----cCcCHHHHHHHHHHHcCCCCEEEEE
Confidence 87 44333 4677876 4567788999999999999999986
No 145
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.51 E-value=5.8e-14 Score=127.15 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=83.7
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 45 SRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..++..++ +.++.+|||||||+|..+..+++.++..+++++|+ +.++..++ ...+++|+.+|+.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------~~~~v~~~~~D~~ 254 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP--------------QFPGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------CCTTEEEEECCTT
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh--------------hcCCeEEEeCCcC
Confidence 34666666 77889999999999999999999887777999999 54222111 2358999999998
Q ss_pred CCcccccccceEEEEEecccc-CcC--HHHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 124 TEEHREKITQASIVFVNNFAF-GPT--VDHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~-~~~--~~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
+ |++.. |+|++..++| +++ ....+++++++|||||++++.+...+.
T Consensus 255 ~-~~p~~----D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 255 K-EVPSG----DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp T-CCCCC----SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred C-CCCCC----CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 8 66532 6777776654 543 457799999999999999998665543
No 146
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=4.7e-14 Score=118.44 Aligned_cols=111 Identities=10% Similarity=0.076 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--cc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HR 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~ 128 (268)
...++.+|||||||+|..+..+|+..+ ..+|+|+|+++.++..++ +++. ..+. ..+++++++|+.+.. +.
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIAR--SNIE----RANL-NDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEESCHHHHHHHHH
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEEcCHHHHHHHHH
Confidence 456788999999999999999998765 446999999997544443 3333 3343 246999999997632 22
Q ss_pred ccc-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 129 EKI-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 129 ~~~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
+.. ..+|+|++... .+.....+.++.++|||||++++.+.+
T Consensus 128 ~~~~~~fD~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 128 NEKYEPFDFIFIDAD--KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HTTCCCCSEEEECSC--GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred hcCCCCcCEEEEcCC--cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 111 23677887644 345678899999999999999986443
No 147
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=8.3e-14 Score=117.90 Aligned_cols=121 Identities=15% Similarity=0.194 Sum_probs=87.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
+.....+...+...++.+|||||||+|..+..+++..+..+|+|+|+|+.++..++ ++++ ..+. ..+++++++
T Consensus 40 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~~ 112 (233)
T 2gpy_A 40 LLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAH--KHVK----ALGL-ESRIELLFG 112 (233)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHH--HHHH----HTTC-TTTEEEECS
T ss_pred HHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEEC
Confidence 34444455555667889999999999999999998875556999999997544443 3333 2343 247999999
Q ss_pred CCCCC-cccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 121 DFLTE-EHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 121 D~~~l-~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
|+.+. +.......+|+|+++... .+....+.++.+.|||||++++.+.
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAK--GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGG--SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CHHHHHHhcccCCCccEEEECCCH--HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 99874 432101246888887553 3678889999999999999998743
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.51 E-value=8.1e-14 Score=124.50 Aligned_cols=109 Identities=20% Similarity=0.323 Sum_probs=81.0
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+.+.+.+.++.+|||||||+|.++..+++. |..+|+|+|+|+ ++..++ ++++ ..+. ..+++++++|+.+++
T Consensus 30 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~-~~~~a~--~~~~----~~~~-~~~i~~~~~d~~~~~ 100 (328)
T 1g6q_1 30 IIQNKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSS-IIEMAK--ELVE----LNGF-SDKITLLRGKLEDVH 100 (328)
T ss_dssp HHHHHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESST-HHHHHH--HHHH----HTTC-TTTEEEEESCTTTSC
T ss_pred HHhhHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHH-HHHHHH--HHHH----HcCC-CCCEEEEECchhhcc
Confidence 444555678899999999999999988775 766799999994 444433 3332 2343 247999999999988
Q ss_pred ccccccceEEEEEecc----ccCcCHHHHHHHHHhcCCCCcEEE
Q psy17227 127 HREKITQASIVFVNNF----AFGPTVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~----~~~~~~~~~l~e~~r~LkpGG~~i 166 (268)
+++. .+|+|+++.. .+...+...+.++.+.|||||+++
T Consensus 101 ~~~~--~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 LPFP--KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CSSS--CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CCCC--cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 6543 4678887643 234557788899999999999997
No 149
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.51 E-value=8e-14 Score=122.23 Aligned_cols=110 Identities=15% Similarity=0.241 Sum_probs=77.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEE-EEEc
Q psy17227 43 LISRMIDQINAT-PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFR-LVKG 120 (268)
Q Consensus 43 ~~~~ll~~l~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~-~~~g 120 (268)
.+..+++.+++. ++.+|||||||||.++..+++. |..+|+|||+|+.|+..+. + ...++. +...
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~-----r--------~~~rv~~~~~~ 137 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKL-----R--------QDDRVRSMEQY 137 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHH-----H--------TCTTEEEECSC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHH-----H--------hCcccceeccc
Confidence 566788888876 5779999999999999988775 7767999999999766532 1 123443 3344
Q ss_pred CCCCCcccc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHRE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+..++..+ +...+|+++++..++ .+...+.+++|+|||||++++.
T Consensus 138 ni~~l~~~~l~~~~fD~v~~d~sf~--sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 138 NFRYAEPVDFTEGLPSFASIDVSFI--SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CGGGCCGGGCTTCCCSEEEECCSSS--CGGGTHHHHHHHSCTTCEEEEE
T ss_pred CceecchhhCCCCCCCEEEEEeeHh--hHHHHHHHHHHHcCcCCEEEEE
Confidence 555544211 111256777765544 4578899999999999999875
No 150
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.50 E-value=3e-14 Score=129.20 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=82.9
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 45 SRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..+++.++ +.++.+|||||||+|..+..+++.++..+++++|+ +.++..++ ...+++++++|+.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~--------------~~~~v~~~~~d~~ 262 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP--------------PLSGIEHVGGDMF 262 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------CCTTEEEEECCTT
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh--------------hcCCCEEEeCCcc
Confidence 34666665 77889999999999999999999886666899999 65322221 1257999999998
Q ss_pred CCcccccccceEEEEEeccc-cCcCHH--HHHHHHHhcCCCCcEEEEeCCCC
Q psy17227 124 TEEHREKITQASIVFVNNFA-FGPTVD--HALKERFQDLKDGARIVSSKSFC 172 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~-~~~~~~--~~l~e~~r~LkpGG~~i~~~~~~ 172 (268)
+ ++++ +|+|++..++ |+++.. ..+++++++|||||++++.+...
T Consensus 263 ~-~~~~----~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 263 A-SVPQ----GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp T-CCCC----EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred c-CCCC----CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 7 5542 5778777664 566665 88999999999999999875443
No 151
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.50 E-value=8.1e-14 Score=115.13 Aligned_cols=104 Identities=12% Similarity=0.231 Sum_probs=75.4
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
+..+.++.+ ++++.+|||||||+|..+..+++. +. +|+|||+++.. ...+++++++|+
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~-~V~gvD~~~~~-------------------~~~~v~~~~~D~ 71 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-AR-KIISIDLQEME-------------------EIAGVRFIRCDI 71 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CS-EEEEEESSCCC-------------------CCTTCEEEECCT
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CC-cEEEEeccccc-------------------cCCCeEEEEccc
Confidence 345666665 578999999999999999998876 44 49999999840 124899999999
Q ss_pred CCCccccc----c-----cceEEEEEeccccC-----cC-------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREK----I-----TQASIVFVNNFAFG-----PT-------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~----~-----~d~dvv~~~~~~~~-----~~-------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+..+. . ..+|+|+++..... .+ ....+..+.++|||||+|++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 72 FKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp TSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 98653210 0 15789998754221 11 234577888999999999974
No 152
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=5.4e-14 Score=118.24 Aligned_cols=114 Identities=13% Similarity=0.177 Sum_probs=78.0
Q ss_pred HcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Ccc
Q psy17227 50 QINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEH 127 (268)
Q Consensus 50 ~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~ 127 (268)
.+...++.+|||||||+|..++.+|+..+ ..+|+|||+|+.++..++ ++++ ..+. ..+++++++|+.+ ++.
T Consensus 53 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~l~~ 125 (221)
T 3u81_A 53 VIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQ--QMLN----FAGL-QDKVTILNGASQDLIPQ 125 (221)
T ss_dssp HHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH--HHHH----HHTC-GGGEEEEESCHHHHGGG
T ss_pred HHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHH--HHHH----HcCC-CCceEEEECCHHHHHHH
Confidence 33456778999999999999999988653 346999999997555543 3333 2343 2479999999866 332
Q ss_pred ccc---ccceEEEEEeccc-cCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 128 REK---ITQASIVFVNNFA-FGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 128 ~~~---~~d~dvv~~~~~~-~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
... ...+|+|+++... +..+....+..+ +.|||||++++.+..
T Consensus 126 ~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 126 LKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 110 0246788887653 333344556666 999999999986443
No 153
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=9.8e-15 Score=120.99 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=72.7
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 41 FDLISRMIDQINA-TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 41 ~~~~~~ll~~l~~-~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
...+..+++.+.. .++.+|||+|||+|.++..+++..+..+++|+|+|+.++..++ +++.. .+ . ++++++
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~--~~~~~----~~--~-~~~~~~ 85 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVAR--RNAER----FG--A-VVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------------CCH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH--HHHHH----hC--C-ceEEEE
Confidence 3445667777765 7889999999999999999998765556999999998665554 33221 12 1 789999
Q ss_pred cCCCCCcccc---cccceEEEEEeccccCcC-H--------------------------HHHHHHHHhcCCCCcE-EEEe
Q psy17227 120 GDFLTEEHRE---KITQASIVFVNNFAFGPT-V--------------------------DHALKERFQDLKDGAR-IVSS 168 (268)
Q Consensus 120 gD~~~l~~~~---~~~d~dvv~~~~~~~~~~-~--------------------------~~~l~e~~r~LkpGG~-~i~~ 168 (268)
+|+.+ ++++ ....+|+|+++..++... . ...+.++.++|||||+ +++.
T Consensus 86 ~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 86 ADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred cchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99987 5543 112467788865443211 1 5566778899999999 5553
No 154
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.50 E-value=1.2e-13 Score=120.50 Aligned_cols=108 Identities=20% Similarity=0.216 Sum_probs=80.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.++... ++++.+|||+|||+|.+++.+|+.... +|+|+|+|+.++..++ ++++ ..+.. .+++++++|+.+
T Consensus 117 ~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~--~n~~----~n~~~-~~v~~~~~D~~~ 186 (278)
T 2frn_A 117 VRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLV--ENIH----LNKVE-DRMSAYNMDNRD 186 (278)
T ss_dssp HHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHH--HHHH----HTTCT-TTEEEECSCTTT
T ss_pred HHHHHh--CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHH--HHHH----HcCCC-ceEEEEECCHHH
Confidence 344444 567999999999999999998886444 6999999998555544 3333 23432 369999999999
Q ss_pred CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++. + ..+|+|+++.. ......+.+++++|||||++++.
T Consensus 187 ~~~-~--~~fD~Vi~~~p---~~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 187 FPG-E--NIADRILMGYV---VRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CCC-C--SCEEEEEECCC---SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred hcc-c--CCccEEEECCc---hhHHHHHHHHHHHCCCCeEEEEE
Confidence 875 2 35678888633 44567788999999999999986
No 155
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.6e-13 Score=114.35 Aligned_cols=113 Identities=16% Similarity=0.242 Sum_probs=82.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
+.....+++.+.+.++.+|||||||+|.++..+++..+. .+|+|+|+|+.++..++ +++. ..+. .++++++
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~--~~v~~~~ 134 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAE--RTLR----KLGY--DNVIVIV 134 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH--HHHH----HHTC--TTEEEEE
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH--HHHH----HcCC--CCeEEEE
Confidence 556677888889999999999999999999999988742 45999999997544443 3332 2232 4799999
Q ss_pred cCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+......+ ..+|+|+++..++... .++.+.|||||++++.
T Consensus 135 ~d~~~~~~~~--~~fD~v~~~~~~~~~~-----~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 135 GDGTLGYEPL--APYDRIYTTAAGPKIP-----EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp SCGGGCCGGG--CCEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEE
T ss_pred CCcccCCCCC--CCeeEEEECCchHHHH-----HHHHHHcCCCcEEEEE
Confidence 9985432212 2467888776643222 4888999999999986
No 156
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=4e-14 Score=121.22 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=81.9
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE- 129 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~- 129 (268)
...++.+|||||||+|..++.+|+..+ ..+|+|||+++.++..++ ++++ ..|. ..+++++++|+.+.....
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~--~~~~----~~g~-~~~i~~~~gda~~~l~~~~ 129 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAH--PYWR----EAKQ-EHKIKLRLGPALDTLHSLL 129 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSH--HHHH----HTTC-TTTEEEEESCHHHHHHHHH
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEEcCHHHHHHHHh
Confidence 455678999999999999999998764 446999999998766654 3333 2343 258999999997643110
Q ss_pred -c--ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 130 -K--ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 130 -~--~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
. ...+|+|+++.. ..+....+.+++++|||||++++.+..
T Consensus 130 ~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 130 NEGGEHQFDFIFIDAD--KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHCSSCEEEEEEESC--GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hccCCCCEeEEEEcCC--hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 0 135788888754 345677899999999999999986443
No 157
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=2.4e-13 Score=118.27 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=86.4
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
.....+..+++.+. .++.+|||||||+|.+++.++...+..+|+|+|+|+.++..++ ++++ ..+. .+++++
T Consensus 94 ~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~--~n~~----~~~~--~~v~~~ 164 (276)
T 2b3t_A 94 DTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQ--RNAQ----HLAI--KNIHIL 164 (276)
T ss_dssp THHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHH--HHHH----HHTC--CSEEEE
T ss_pred hHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCC--CceEEE
Confidence 34445566777776 6788999999999999999998777667999999998555554 3333 2333 379999
Q ss_pred EcCCCCCcccccccceEEEEEeccccCc--------------------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFGP--------------------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~~--------------------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+.+. +++ ..+|+|+++..++.. .....+.++.+.|||||++++.
T Consensus 165 ~~d~~~~-~~~--~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 165 QSDWFSA-LAG--QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CCSTTGG-GTT--CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred Ecchhhh-ccc--CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999873 222 247888887543321 2356678889999999999986
No 158
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.49 E-value=1.3e-13 Score=116.29 Aligned_cols=111 Identities=21% Similarity=0.258 Sum_probs=81.6
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
..+..+..+++.+++.++.+|||||||+|.++..++.. + .+|+|+|+|+.++..++ +++. ..++++++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~~~~~~~~a~--~~~~--------~~~~v~~~ 121 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-V-DKVVSVEINEKMYNYAS--KLLS--------YYNNIKLI 121 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-S-SEEEEEESCHHHHHHHH--HHHT--------TCSSEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-c-CEEEEEeCCHHHHHHHH--HHHh--------hcCCeEEE
Confidence 34566778888999999999999999999999998886 4 45999999987444433 3222 12289999
Q ss_pred EcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+.+....+. .+|+|+++..++.-. .++.++|||||++++.
T Consensus 122 ~~d~~~~~~~~~--~fD~v~~~~~~~~~~-----~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 122 LGDGTLGYEEEK--PYDRVVVWATAPTLL-----CKPYEQLKEGGIMILP 164 (231)
T ss_dssp ESCGGGCCGGGC--CEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEE
T ss_pred ECCcccccccCC--CccEEEECCcHHHHH-----HHHHHHcCCCcEEEEE
Confidence 999987322222 467888776543221 3688999999999986
No 159
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.49 E-value=3.8e-14 Score=119.98 Aligned_cols=108 Identities=16% Similarity=0.244 Sum_probs=79.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
...++.. +.++.+|||||||+|.++..+++. .+++|+|+|+.++..++ +++.. . ..+++++++|+.
T Consensus 24 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~--~~~~~----~---~~~~~~~~~d~~ 89 (243)
T 3d2l_A 24 VAWVLEQ--VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQ--EKAME----T---NRHVDFWVQDMR 89 (243)
T ss_dssp HHHHHHH--SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHH--HHHHH----T---TCCCEEEECCGG
T ss_pred HHHHHHH--cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHH--Hhhhh----c---CCceEEEEcChh
Confidence 3445555 456789999999999999988775 45999999997555543 33221 1 247999999999
Q ss_pred CCcccccccceEEEEEe--ccccC---cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVN--NFAFG---PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~--~~~~~---~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++++ . .+|+|++. .+.|. .+....++++.++|||||++++.
T Consensus 90 ~~~~~-~--~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 90 ELELP-E--PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCCS-S--CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCC-C--CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 88764 2 46778775 34455 45677899999999999999974
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.49 E-value=1.8e-13 Score=117.07 Aligned_cols=112 Identities=17% Similarity=0.183 Sum_probs=75.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc--ccccEEEEEcCCCC-Cc--c
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK--RHGEFRLVKGDFLT-EE--H 127 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~i~~~~gD~~~-l~--~ 127 (268)
+.++.+|||||||+|.+++.+|+..+...|+|||+|+.++..++ ++++........ ...+++++++|+.+ ++ +
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~--~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVE--DRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHH--HHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHH--HHHHHHhhccccccCCCcEEEEeccHHHHHHHhc
Confidence 45788999999999999999998876546999999998555544 333321100000 12489999999987 55 4
Q ss_pred cccccceEEEEEeccccCcC---------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 128 REKITQASIVFVNNFAFGPT---------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 128 ~~~~~d~dvv~~~~~~~~~~---------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++. .+|.|+++..--+.+ ....+.++.++|||||++++.
T Consensus 125 ~~~--~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 EKG--QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CTT--CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccc--ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 333 345565431111110 047889999999999999874
No 161
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=4.7e-14 Score=118.51 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c-cc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E-HR 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~-~~ 128 (268)
...++.+|||||||+|..+..++...+ ..+|+|+|+|+.++..++ ++++ ..+.. .+++++++|+.+. + +.
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~~-~~v~~~~~d~~~~~~~~~ 133 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAK--EYWE----KAGLS-DKIGLRLSPAKDTLAELI 133 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHH--HHHH----HTTCT-TTEEEEESCHHHHHHHHH
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH--HHHH----HCCCC-CceEEEeCCHHHHHHHhh
Confidence 445778999999999999999998765 456999999997544443 3332 33432 4699999999653 2 11
Q ss_pred ccc--cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 129 EKI--TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 129 ~~~--~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
... ..+|+|+++.. ..+....+.++++.|||||++++.+.+
T Consensus 134 ~~~~~~~fD~v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 134 HAGQAWQYDLIYIDAD--KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TTTCTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hccCCCCccEEEECCC--HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 100 35788887543 345777899999999999999987443
No 162
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=2.6e-13 Score=108.56 Aligned_cols=104 Identities=18% Similarity=0.152 Sum_probs=80.6
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
+..+++.+. +.++.+|||+|||+|.++..+++..+. .+++|+|+|+ +.. ..+++++++|
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~------------------~~~~~~~~~d 70 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP------------------IVGVDFLQGD 70 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC------------------CTTEEEEESC
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc------------------cCcEEEEEcc
Confidence 455666665 678999999999999999999988642 4699999998 432 1479999999
Q ss_pred CCCCc--------ccccccceEEEEEeccccC-cCH-----------HHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEE--------HREKITQASIVFVNNFAFG-PTV-----------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~--------~~~~~~d~dvv~~~~~~~~-~~~-----------~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+.+ +++. .+|+|+++..+++ ... ...+.++.++|||||.+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~--~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 71 FRDELVMKALLERVGDS--KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp TTSHHHHHHHHHHHTTC--CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccchhhhhhhccCCCC--ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99876 4433 4678888766543 333 57789999999999999986
No 163
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.49 E-value=1.8e-14 Score=123.61 Aligned_cols=116 Identities=17% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHH-------------HHHhcc--------
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRW-------------MQWYGK-------- 110 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~-------------~~~~~~-------- 110 (268)
+..++.+|||||||+|.++..++.. +...|+|+|+|+.++..++ +++... +...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQ--KWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHH--HHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHH--HHHhcCCccccchhhhhhhhcccccccchHHHH
Confidence 5567889999999999999887764 4445999999997555543 222100 000000
Q ss_pred --ccccE-EEEEcCCCCCcc-cc-cccceEEEEEecccc-----CcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 111 --RHGEF-RLVKGDFLTEEH-RE-KITQASIVFVNNFAF-----GPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 111 --~~~~i-~~~~gD~~~l~~-~~-~~~d~dvv~~~~~~~-----~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
...++ +++++|+.+.+. ++ ....+|+|++...++ .+++...+.++.++|||||++++...
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 00138 999999998643 33 112467787766543 34678889999999999999998743
No 164
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.48 E-value=1.5e-13 Score=116.65 Aligned_cols=113 Identities=15% Similarity=0.235 Sum_probs=82.7
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.+.....+++.+++.++.+|||||||+|.++..+++..+ .+|+|+|+|+.++..++ +++. ..+. .++++++
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~--~~~~----~~~~--~~v~~~~ 146 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAK--RNLE----RAGV--KNVHVIL 146 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHH--HHHH----HTTC--CSEEEEE
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHH--HHHH----HcCC--CCcEEEE
Confidence 455667788888999999999999999999999999877 45999999997544443 3332 2332 4699999
Q ss_pred cCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+ ..++++.. .+|+|+++...+.. ..++.+.|||||++++.
T Consensus 147 ~d~-~~~~~~~~-~fD~Ii~~~~~~~~-----~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 147 GDG-SKGFPPKA-PYDVIIVTAGAPKI-----PEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp SCG-GGCCGGGC-CEEEEEECSBBSSC-----CHHHHHTEEEEEEEEEE
T ss_pred CCc-ccCCCCCC-CccEEEECCcHHHH-----HHHHHHhcCCCcEEEEE
Confidence 998 34443332 36788876554321 13788999999999986
No 165
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.48 E-value=5.9e-14 Score=117.08 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=75.2
Q ss_pred HHHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+++.+ ...++.+|||||||+|.++..+ +.. ++|+|+|+. +++++++|+.+
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l----~~~-v~~~D~s~~-----------------------~~~~~~~d~~~ 108 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSI----RNP-VHCFDLASL-----------------------DPRVTVCDMAQ 108 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHC----CSC-EEEEESSCS-----------------------STTEEESCTTS
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHh----hcc-EEEEeCCCC-----------------------CceEEEecccc
Confidence 344444 2467789999999999998765 234 999999983 45689999999
Q ss_pred CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|+++. .+|+|++...+|.+++...+.++.++|||||++++.+
T Consensus 109 ~~~~~~--~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 109 VPLEDE--SVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp CSCCTT--CEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCC--CEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEE
Confidence 887654 4577887777677899999999999999999999873
No 166
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=3e-13 Score=118.50 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=83.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
...+..+++.+...++.+|||||||+|.+++.++.. +..+|+|+|+|+.++.+++ ++++ ..+.. .+++|+++
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~--~n~~----~~~l~-~~v~~~~~ 180 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIAR--KNAE----RHGVS-DRFFVRKG 180 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHH--HHHH----HTTCT-TSEEEEES
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHH--HHHH----HcCCC-CceEEEEC
Confidence 445556666665557789999999999999999988 6667999999998655554 3333 23432 35999999
Q ss_pred CCCCCccccccc-ceEEEEEecccc------------CcC--------HHHHHHHHH-hcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKIT-QASIVFVNNFAF------------GPT--------VDHALKERF-QDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~-d~dvv~~~~~~~------------~~~--------~~~~l~e~~-r~LkpGG~~i~~ 168 (268)
|+.+. ++. .| .+|+|++|..+. .|. ....++++. +.|||||++++.
T Consensus 181 D~~~~-~~~-~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 181 EFLEP-FKE-KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp STTGG-GGG-GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cchhh-ccc-ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99873 222 22 127888874332 211 226789999 999999999985
No 167
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.48 E-value=1.6e-13 Score=125.08 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
..++.+|||+|||+|.+++.+++. +. +|+|+|+|+.++..++ +++.. .+ .+++++++|+.+.+.++ .
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~-g~-~V~gvDis~~al~~A~--~n~~~----~~---~~v~~~~~D~~~~~~~~--~ 297 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARM-GA-EVVGVEDDLASVLSLQ--KGLEA----NA---LKAQALHSDVDEALTEE--A 297 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHT-TC-EEEEEESBHHHHHHHH--HHHHH----TT---CCCEEEECSTTTTSCTT--C
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHc-CC-EEEEEECCHHHHHHHH--HHHHH----cC---CCeEEEEcchhhccccC--C
Confidence 347889999999999999998876 55 5999999997555544 33332 22 25899999999877543 3
Q ss_pred ceEEEEEeccccC------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFG------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++..+|. .+....+.++.++|||||++++.
T Consensus 298 ~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 298 RFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 5688888876554 44667889999999999999975
No 168
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.47 E-value=5.1e-13 Score=113.56 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=86.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
+..+..++..+++.++++|||+|||+|.++..+++. +. +++|+|+|+.+...++ +++. ..+. ..+++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~~~~~~~ 147 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AG-EVWTFEAVEEFYKTAQ--KNLK----KFNL-GKNVKFFNV 147 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SS-EEEEECSCHHHHHHHH--HHHH----HTTC-CTTEEEECS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CC-EEEEEecCHHHHHHHH--HHHH----HcCC-CCcEEEEEc
Confidence 455667888889999999999999999999999887 44 5999999997544443 3332 2332 258999999
Q ss_pred CCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.+..+++. .+|+|++ +.+++...+.++.+.|||||++++.
T Consensus 148 d~~~~~~~~~--~~D~v~~----~~~~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 148 DFKDAEVPEG--IFHAAFV----DVREPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp CTTTSCCCTT--CBSEEEE----CSSCGGGGHHHHHHHBCTTCEEEEE
T ss_pred ChhhcccCCC--cccEEEE----CCcCHHHHHHHHHHHcCCCCEEEEE
Confidence 9988542333 3567776 3456778899999999999999986
No 169
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.47 E-value=2.8e-13 Score=111.12 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=75.7
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCC---------cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccE
Q psy17227 46 RMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGC---------KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEF 115 (268)
Q Consensus 46 ~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~---------~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i 115 (268)
.+...+. ++++.+|||||||+|.++..+++..+. .+|+|+|+|+.+ ...++
T Consensus 12 ~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-------------------~~~~~ 72 (196)
T 2nyu_A 12 EVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-------------------PLEGA 72 (196)
T ss_dssp HHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-------------------CCTTC
T ss_pred HHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-------------------cCCCC
Confidence 4444444 678999999999999999999998764 569999999841 12468
Q ss_pred EEE-EcCCCCCcccc------cccceEEEEEeccccC-----cCH-------HHHHHHHHhcCCCCcEEEEe
Q psy17227 116 RLV-KGDFLTEEHRE------KITQASIVFVNNFAFG-----PTV-------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 116 ~~~-~gD~~~l~~~~------~~~d~dvv~~~~~~~~-----~~~-------~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++ ++|+.+.+... ....+|+|+++...+. .+. ...+.+++++|||||+|++.
T Consensus 73 ~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 73 TFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp EEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 899 99998764210 1124688887643221 222 36788999999999999986
No 170
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.47 E-value=4.1e-13 Score=120.04 Aligned_cols=122 Identities=17% Similarity=0.216 Sum_probs=85.7
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHH---Hhcc--cc
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQ---WYGK--RH 112 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~---~~~~--~~ 112 (268)
..+.....++..+++.++.+|||+|||+|.++..+++..|. .+|+|+|+++.++..++ +++.+.-. ..+. ..
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~--~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK--KNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH--HHHHHHHHHHTTTCSSCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--HHHHHhhcccccccccccC
Confidence 33445677888889999999999999999999999987653 56999999997555544 43332100 0010 02
Q ss_pred ccEEEEEcCCCCC--cccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 113 GEFRLVKGDFLTE--EHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 113 ~~i~~~~gD~~~l--~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+++++++|+.+. ++++. .+|+|+++. +++...+.++.++|||||++++.
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~--~fD~V~~~~----~~~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSL--TFDAVALDM----LNPHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp CCEEEEESCTTCCC---------EEEEEECS----SSTTTTHHHHGGGEEEEEEEEEE
T ss_pred CceEEEECChHHcccccCCC--CeeEEEECC----CCHHHHHHHHHHhcCCCcEEEEE
Confidence 4899999999986 34333 467888753 33344789999999999999976
No 171
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.47 E-value=2.6e-13 Score=123.15 Aligned_cols=103 Identities=21% Similarity=0.303 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
...+|++|||||||+|.+++.+| +.|+.+|+|||.|+ ++..|+ +.++ ..|.. .+|+++++|++++.+++
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa-~aGA~~V~ave~s~-~~~~a~--~~~~----~n~~~-~~i~~i~~~~~~~~lpe-- 148 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCA-QAGARRVYAVEASA-IWQQAR--EVVR----FNGLE-DRVHVLPGPVETVELPE-- 148 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-THHHHH--HHHH----HTTCT-TTEEEEESCTTTCCCSS--
T ss_pred HhcCCCEEEEeCCCccHHHHHHH-HhCCCEEEEEeChH-HHHHHH--HHHH----HcCCC-ceEEEEeeeeeeecCCc--
Confidence 34578999999999999998655 47888899999997 444433 3332 34543 58999999999987764
Q ss_pred cceEEEEEec---cccCc-CHHHHHHHHHhcCCCCcEEE
Q psy17227 132 TQASIVFVNN---FAFGP-TVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 132 ~d~dvv~~~~---~~~~~-~~~~~l~e~~r~LkpGG~~i 166 (268)
.+|+|+++. .++.. .+...+....|.|||||+++
T Consensus 149 -~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 -QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred -cccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 578888743 23334 45666777779999999987
No 172
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.47 E-value=7.8e-14 Score=112.82 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=74.0
Q ss_pred HHHHHHHcCC--CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 44 ISRMIDQINA--TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 44 ~~~ll~~l~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
...+++.+.. .++.+|||||||+|.++..+++.. +|+|+|+|+.|+.. ..+++++++|
T Consensus 10 ~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-----------------~~~~~~~~~d 69 (170)
T 3q87_B 10 TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-----------------HRGGNLVRAD 69 (170)
T ss_dssp HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-----------------CSSSCEEECS
T ss_pred HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-----------------ccCCeEEECC
Confidence 3444444444 567799999999999999888754 59999999862221 2478999999
Q ss_pred CCCCcccccccceEEEEEeccccC-c---------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFG-P---------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~-~---------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+ ++++. .+|+|+++..+++ + +....+.++.+.| |||++++.
T Consensus 70 ~~~-~~~~~--~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~ 122 (170)
T 3q87_B 70 LLC-SINQE--SVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLL 122 (170)
T ss_dssp TTT-TBCGG--GCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEE
T ss_pred hhh-hcccC--CCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEE
Confidence 988 54444 4567888766543 2 2357788999988 99999875
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.46 E-value=1.4e-13 Score=114.73 Aligned_cols=106 Identities=16% Similarity=0.109 Sum_probs=78.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREK 130 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~ 130 (268)
..++.+|||||||+|..++.+++..+ ..+|+|+|+|+.++..++ ++++ ..+. ..+++++++|+.+. +..+
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~~~- 125 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHAR--RMLH----DNGL-IDRVELQVGDPLGIAAGQR- 125 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHH--HHHH----HHSG-GGGEEEEESCHHHHHTTCC-
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HCCC-CceEEEEEecHHHHhccCC-
Confidence 34678999999999999999988764 446999999997555543 3333 2333 24799999999763 3322
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeCC
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSKS 170 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~~ 170 (268)
. +|+|+++. ...+....+.++.++|||||++++.+.
T Consensus 126 -~-fD~v~~~~--~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 126 -D-IDILFMDC--DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp -S-EEEEEEET--TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred -C-CCEEEEcC--ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 68888873 345678889999999999999998643
No 174
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.46 E-value=7.9e-14 Score=116.93 Aligned_cols=92 Identities=22% Similarity=0.336 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccce
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQA 134 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~ 134 (268)
++.+|||||||+|.++..++.. +|+|+|+.++..++ + .+++++++|+.+++++++. +
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~------~---------~~~~~~~~d~~~~~~~~~~--f 103 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIAR------K---------RGVFVLKGTAENLPLKDES--F 103 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHH------H---------TTCEEEECBTTBCCSCTTC--E
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHH------h---------cCCEEEEcccccCCCCCCC--e
Confidence 3789999999999999876543 99999987444332 1 1688999999998876543 5
Q ss_pred EEEEEecc-ccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 135 SIVFVNNF-AFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 135 dvv~~~~~-~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
|+|++... .|.+++...+.++.++|||||++++..
T Consensus 104 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 104 DFALMVTTICFVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp EEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 66666554 577889999999999999999999863
No 175
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.46 E-value=1.6e-13 Score=123.75 Aligned_cols=117 Identities=14% Similarity=0.178 Sum_probs=86.4
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+++.+..+|||||||+|.++..++++++..+++..|+. .++.. +++... ..+ .++|+|+.+|+.+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp-~v~~~--a~~~~~----~~~--~~rv~~~~gD~~~ 239 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIP-EVVWT--AKQHFS----FQE--EEQIDFQEGDFFK 239 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECH-HHHHH--HHHHSC----C----CCSEEEEESCTTT
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCH-HHHHH--HHHhhh----hcc--cCceeeecCcccc
Confidence 34666778888899999999999999999999988778999984 33332 222221 111 3589999999987
Q ss_pred CcccccccceEEEEEecccc-CcCH--HHHHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 125 EEHREKITQASIVFVNNFAF-GPTV--DHALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~-~~~~--~~~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
.|.+ ++|+|++..++| |++. ...|++++++|||||++++.+.+.++
T Consensus 240 ~~~~----~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 240 DPLP----EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp SCCC----CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred CCCC----CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 6543 457777776654 5553 45689999999999999998776554
No 176
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.46 E-value=9.3e-14 Score=125.01 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=79.8
Q ss_pred HHHc--CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 48 IDQI--NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 48 l~~l--~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+..+ ++.++.+|||||||+|.++..+++.++..+++|+|+ +.++..++ ...+++|+++|+.+
T Consensus 179 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------~~~~v~~~~~d~~~- 242 (352)
T 1fp2_A 179 LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS--------------GSNNLTYVGGDMFT- 242 (352)
T ss_dssp HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------CBTTEEEEECCTTT-
T ss_pred HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc--------------cCCCcEEEeccccC-
Confidence 4444 466788999999999999999998876656999999 75332221 12469999999976
Q ss_pred cccccccceEEEEEecc-ccCcCHH--HHHHHHHhcCCC---CcEEEEeCCCCC
Q psy17227 126 EHREKITQASIVFVNNF-AFGPTVD--HALKERFQDLKD---GARIVSSKSFCP 173 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~~~~~~--~~l~e~~r~Lkp---GG~~i~~~~~~~ 173 (268)
+++. +|+|++..+ +|+++.. ..+++++++||| ||++++.+...+
T Consensus 243 ~~p~----~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 243 SIPN----ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp CCCC----CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred CCCC----ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 5432 566776665 4577666 889999999999 999998755443
No 177
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.45 E-value=1.9e-13 Score=117.91 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.++.+|||||||+|.++..+++..+...++|+|+|+.++..++ + . ..++.++++|+.++|+.+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~------~----~---~~~~~~~~~d~~~~~~~~~~-- 148 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA------K----R---YPQVTFCVASSHRLPFSDTS-- 148 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH------H----H---CTTSEEEECCTTSCSBCTTC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHH------H----h---CCCcEEEEcchhhCCCCCCc--
Confidence 6788999999999999999988764445999999987444432 1 1 24789999999998876654
Q ss_pred eEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 134 ASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|+|++... ...+.++.++|||||++++..
T Consensus 149 fD~v~~~~~------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 149 MDAIIRIYA------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEEEEEESC------CCCHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCC------hhhHHHHHHhcCCCcEEEEEE
Confidence 566776433 124899999999999999863
No 178
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=2.6e-13 Score=118.09 Aligned_cols=104 Identities=20% Similarity=0.217 Sum_probs=80.5
Q ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 51 INATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
..+.++++|||+|||+|.+++.+|+..+..+|+|+|+|+.++..++ ++++ ..+. .+++++++|+.+++. .
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~--~n~~----~n~l--~~~~~~~~d~~~~~~-~- 184 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLC--ENIK----LNKL--NNVIPILADNRDVEL-K- 184 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHH--HHHH----HTTC--SSEEEEESCGGGCCC-T-
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH--HHHH----HcCC--CCEEEEECChHHcCc-c-
Confidence 3478899999999999999999998866556999999998555544 4333 2333 478999999988743 2
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++.. .+....+.++.+.|||||+++++
T Consensus 185 -~~~D~Vi~d~p---~~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 185 -DVADRVIMGYV---HKTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp -TCEEEEEECCC---SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred -CCceEEEECCc---ccHHHHHHHHHHHcCCCCEEEEE
Confidence 35788888744 26677889999999999999976
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=3.2e-13 Score=117.39 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=89.3
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
..+.....++..+++.++.+|||+|||+|.++..+++..+ ..+++|+|+|+.++..++ ++++ ..+. ..++++
T Consensus 96 ~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~--~~~~----~~~~-~~~v~~ 168 (277)
T 1o54_A 96 VYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAE--SNLT----KWGL-IERVTI 168 (277)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHH--HHHH----HTTC-GGGEEE
T ss_pred cCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH--HHHH----HcCC-CCCEEE
Confidence 4455667788889999999999999999999999998743 456999999997555443 3333 2332 247999
Q ss_pred EEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 118 VKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+++|+.+. +++. .+|+|+++ .+++...+.++.++|||||++++..
T Consensus 169 ~~~d~~~~-~~~~--~~D~V~~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 169 KVRDISEG-FDEK--DVDALFLD----VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ECCCGGGC-CSCC--SEEEEEEC----CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHc-ccCC--ccCEEEEC----CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999875 3333 46788873 4677788999999999999999863
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.45 E-value=5.8e-13 Score=111.95 Aligned_cols=115 Identities=18% Similarity=0.220 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcC--CCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhcc---cccc
Q psy17227 41 FDLISRMIDQIN--ATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGK---RHGE 114 (268)
Q Consensus 41 ~~~~~~ll~~l~--~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~---~~~~ 114 (268)
+.....+++.+. +.++.+|||||||+|..+..+++..+. .+|+|+|+|+.++..++ +++.+ .+. ...+
T Consensus 61 p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~--~~~~~----~~~~~~~~~~ 134 (226)
T 1i1n_A 61 PHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSV--NNVRK----DDPTLLSSGR 134 (226)
T ss_dssp HHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHHH----HCTHHHHTSS
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH--HHHHh----hcccccCCCc
Confidence 344556777775 789999999999999999999987653 36999999997555443 33321 221 1248
Q ss_pred EEEEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 115 FRLVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 115 i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++++++|+.+.+..+. .+|+|+++..++ ..+.++.+.|||||+++++
T Consensus 135 v~~~~~d~~~~~~~~~--~fD~i~~~~~~~-----~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 135 VQLVVGDGRMGYAEEA--PYDAIHVGAAAP-----VVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp EEEEESCGGGCCGGGC--CEEEEEECSBBS-----SCCHHHHHTEEEEEEEEEE
T ss_pred EEEEECCcccCcccCC--CcCEEEECCchH-----HHHHHHHHhcCCCcEEEEE
Confidence 9999999986554333 467888765542 1246888999999999986
No 181
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.45 E-value=9.9e-15 Score=124.05 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=79.4
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 45 SRMIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..++..+ ...++.+|||+|||+|.++..++.. +. +|+|+|+|+.++..++ ++++ ..+. ..+++++++|+.
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~-~~-~v~~vD~s~~~~~~a~--~~~~----~~~~-~~~~~~~~~d~~ 137 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT-GM-RVIAIDIDPVKIALAR--NNAE----VYGI-ADKIEFICGDFL 137 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT-TC-EEEEEESCHHHHHHHH--HHHH----HTTC-GGGEEEEESCHH
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHH--HHHH----HcCC-CcCeEEEECChH
Confidence 3444433 2347899999999999999999875 54 4999999997555543 3333 2332 148999999998
Q ss_pred CCcccccccceEEEEEeccccC-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVNNFAFG-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++ ++. .+|+|+++..++. .+....+.++.++|||||.+++.
T Consensus 138 ~~~-~~~--~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 138 LLA-SFL--KADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp HHG-GGC--CCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Hhc-ccC--CCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 876 233 4567888766544 44444677888999999997764
No 182
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.45 E-value=2.1e-13 Score=122.49 Aligned_cols=113 Identities=10% Similarity=0.124 Sum_probs=84.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
....+++.+...++.+|||||||+|.++..+++..+..+|+|+|+|+.++..++ +++. ..+ .+++++++|+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~--~~~~----~~~---~~~~~~~~d~ 254 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASR--ATLA----ANG---VEGEVFASNV 254 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHH--HHHH----HTT---CCCEEEECST
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHH--HHHH----HhC---CCCEEEEccc
Confidence 456677888777788999999999999999988765445999999997555443 3332 222 2467899999
Q ss_pred CCCcccccccceEEEEEeccccC------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFG------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+ +. .+|+|+++..+|. .+....+++++++|||||.+++.
T Consensus 255 ~~~~--~~--~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 255 FSEV--KG--RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp TTTC--CS--CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccc--cC--CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 7754 32 5788988877653 33567799999999999999975
No 183
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.44 E-value=3.2e-13 Score=126.57 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=82.5
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+++.+...++.+|||||||+|.+++.+|+ .+..+|+|+|+|+ ++..|+ ++++ ..+. ..+++++++|+.++
T Consensus 149 ~il~~l~~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~--~~~~----~~gl-~~~v~~~~~d~~~~ 219 (480)
T 3b3j_A 149 AILQNHTDFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAE--VLVK----SNNL-TDRIVVIPGKVEEV 219 (480)
T ss_dssp HHHHTGGGTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHH--HHHH----HTTC-TTTEEEEESCTTTC
T ss_pred HHHHhhhhcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHH--HHHH----HcCC-CCcEEEEECchhhC
Confidence 466666677889999999999999998877 5665699999997 554443 3333 2343 25899999999987
Q ss_pred cccccccceEEEEEecc-ccC--cCHHHHHHHHHhcCCCCcEEEE
Q psy17227 126 EHREKITQASIVFVNNF-AFG--PTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~~--~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
++++ .+|+|+++.. .|. ++....+.++.+.|||||+++.
T Consensus 220 ~~~~---~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 220 SLPE---QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCSS---CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred ccCC---CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 7543 4788888765 332 4456678888899999999984
No 184
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=3.7e-13 Score=113.51 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=82.9
Q ss_pred cHHHHHHHHHHc--CCCCCCEEEEEcCCCCHHHHHHHHHhCC------cEEEEEeCCCChhHHHHHHHHHHHHHHHhc--
Q psy17227 40 SFDLISRMIDQI--NATPDDVFVDLGSGVGQVVLQVAAATGC------KICWGVEKADLPAKYAEMHTVFKRWMQWYG-- 109 (268)
Q Consensus 40 ~~~~~~~ll~~l--~~~~~~~vLDiGCG~G~~~~~la~~~~~------~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~-- 109 (268)
.+.....+++.+ .+.++.+|||||||+|.++..+++..+. .+|+|+|+++.++..++ +++.+ .+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~--~~~~~----~~~~ 140 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSK--ANLNT----DDRS 140 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHH--HHHHH----HHHH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHH--HHHHh----cCcc
Confidence 344566778877 5889999999999999999999987663 35999999997555544 33322 11
Q ss_pred -cccccEEEEEcCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 110 -KRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 110 -~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
....+++++++|+.+ ++++. ..+|+|++...++. .+.++.+.|||||++++.
T Consensus 141 ~~~~~~v~~~~~d~~~-~~~~~-~~fD~I~~~~~~~~-----~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 141 MLDSGQLLIVEGDGRK-GYPPN-APYNAIHVGAAAPD-----TPTELINQLASGGRLIVP 193 (227)
T ss_dssp HHHHTSEEEEESCGGG-CCGGG-CSEEEEEECSCBSS-----CCHHHHHTEEEEEEEEEE
T ss_pred ccCCCceEEEECCccc-CCCcC-CCccEEEECCchHH-----HHHHHHHHhcCCCEEEEE
Confidence 002489999999987 33331 24678887765432 226888999999999985
No 185
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.44 E-value=7.7e-13 Score=117.54 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=82.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+...+++.++.+|||+|||+|..+..+|...+ ..+|+|+|+|+.++..+ +++++ ..|. .+++++++|+.+
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a--~~~~~----~~g~--~~v~~~~~D~~~ 180 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRET--RLNLS----RLGV--LNVILFHSSSLH 180 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHH--HHHHH----HHTC--CSEEEESSCGGG
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHH--HHHHH----HhCC--CeEEEEECChhh
Confidence 345667899999999999999999999998764 34699999999744443 34443 2343 379999999998
Q ss_pred CcccccccceEEEEEecccc-------CcCH----------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAF-------GPTV----------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~-------~~~~----------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
++..+. .+|+|+++..|. .++. ...+.++++.|||||+++.+
T Consensus 181 ~~~~~~--~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 181 IGELNV--EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp GGGGCC--CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccc--cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 764332 468888864431 1221 46688899999999999875
No 186
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.43 E-value=3.6e-13 Score=117.26 Aligned_cols=114 Identities=14% Similarity=0.094 Sum_probs=82.9
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+...+++.+|.+|||+|||+|+.+..+|...+. .+|+|+|+|+.++.. ++++++ ..|. .+++++++|+.++
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~--~~~~~~----~~g~--~~v~~~~~D~~~~ 146 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKA--LKSNIN----RMGV--LNTIIINADMRKY 146 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHH--HHHHHH----HTTC--CSEEEEESCHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHH--HHHHHH----HhCC--CcEEEEeCChHhc
Confidence 445568899999999999999999999987543 569999999874443 334443 2343 3899999999887
Q ss_pred cccc--cccceEEEEEeccccC-------------------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHRE--KITQASIVFVNNFAFG-------------------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~--~~~d~dvv~~~~~~~~-------------------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+... ....+|+|+++..+.. ......+.++++.|||||+++.+
T Consensus 147 ~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp HHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 6410 1124688888754432 23467788999999999999865
No 187
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=5e-13 Score=114.68 Aligned_cols=109 Identities=15% Similarity=0.075 Sum_probs=79.5
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccc-
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHR- 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~- 128 (268)
...++.+|||||||+|..++.+|+..+ ..+++|+|+|+.++..++ ++++ ..|. ..+++++++|+.+. +..
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~--~~~~----~~g~-~~~i~~~~gda~~~l~~l~ 148 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL--PVIK----KAGV-DHKIDFREGPALPVLDEMI 148 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH--HHHH----HTTC-GGGEEEEESCHHHHHHHHH
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCCeEEEECCHHHHHHHHH
Confidence 345678999999999999999998764 346999999998555543 3333 3443 35899999999763 321
Q ss_pred c---cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 129 E---KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 129 ~---~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
. ....+|+|++... ..+....+.++++.|||||++++.+
T Consensus 149 ~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 149 KDEKNHGSYDFIFVDAD--KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HSGGGTTCBSEEEECSC--STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred hccCCCCCEEEEEEcCc--hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 0 0124677888643 3457788999999999999999863
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=7.8e-13 Score=111.22 Aligned_cols=115 Identities=13% Similarity=0.191 Sum_probs=82.9
Q ss_pred HHHHHHHHHHc--CCCCCCEEEEEcCCCCHHHHHHHHHhC-----CcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc---
Q psy17227 41 FDLISRMIDQI--NATPDDVFVDLGSGVGQVVLQVAAATG-----CKICWGVEKADLPAKYAEMHTVFKRWMQWYGK--- 110 (268)
Q Consensus 41 ~~~~~~ll~~l--~~~~~~~vLDiGCG~G~~~~~la~~~~-----~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~--- 110 (268)
+.....+++.+ .+.++.+|||||||+|.++..+++..+ ..+|+|+|+++.++..++ +++.+ .+.
T Consensus 64 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~--~~~~~----~~~~~~ 137 (227)
T 2pbf_A 64 PHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSL--ENIKR----DKPELL 137 (227)
T ss_dssp HHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHH--HHHHH----HCGGGG
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHH--HHHHH----cCcccc
Confidence 44455677777 588999999999999999999988764 235999999997555443 33332 221
Q ss_pred ccccEEEEEcCCCCCc----ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 111 RHGEFRLVKGDFLTEE----HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 111 ~~~~i~~~~gD~~~l~----~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+++++++|+.+.+ .... .+|+|+++..++. .+.++.+.|||||++++.
T Consensus 138 ~~~~v~~~~~d~~~~~~~~~~~~~--~fD~I~~~~~~~~-----~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 138 KIDNFKIIHKNIYQVNEEEKKELG--LFDAIHVGASASE-----LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp SSTTEEEEECCGGGCCHHHHHHHC--CEEEEEECSBBSS-----CCHHHHHHEEEEEEEEEE
T ss_pred ccCCEEEEECChHhcccccCccCC--CcCEEEECCchHH-----HHHHHHHhcCCCcEEEEE
Confidence 1248999999998754 3333 4678887766442 347888999999999986
No 189
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=6.1e-13 Score=111.95 Aligned_cols=110 Identities=14% Similarity=0.075 Sum_probs=79.8
Q ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c-c
Q psy17227 51 INATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E-H 127 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~-~ 127 (268)
+...++.+|||||||+|..++.+++..+ ..+++|+|+|+.++..++ ++++ ..+. ..+++++++|+.+. + +
T Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~g~-~~~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 65 ARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGR--PLWR----QAEA-EHKIDLRLKPALETLDEL 137 (229)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHH--HHHH----HTTC-TTTEEEEESCHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HCCC-CCeEEEEEcCHHHHHHHH
Confidence 3456788999999999999999988754 456999999997555443 3333 2343 25899999998653 2 2
Q ss_pred cccc--cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 128 REKI--TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 128 ~~~~--~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
.+.. ..+|+|+++.. .......+.++.+.|||||++++.+
T Consensus 138 ~~~~~~~~~D~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDAD--KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHTTCTTCEEEEEECSC--STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhcCCCCCccEEEECCC--HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 1110 35788888643 3456778999999999999999863
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.42 E-value=4e-13 Score=114.99 Aligned_cols=123 Identities=12% Similarity=0.076 Sum_probs=79.7
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHH--hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccc--------
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAA--TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRH-------- 112 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~--~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~-------- 112 (268)
.+..+++.+...++.+|||+|||+|.+++.++.. .+..+|+|+|+|+.++..|+. ++.... ..+...
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~--~~~~~~-~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAK--NLALLS-PAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHH--HHHTTS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHH--HHHHhh-hccccccchhhhhh
Confidence 3444555555456789999999999999999887 444469999999987766652 221100 000000
Q ss_pred ----------------ccEE-------------EEEcCCCCCccc---ccccceEEEEEecccc-Cc---------CHHH
Q psy17227 113 ----------------GEFR-------------LVKGDFLTEEHR---EKITQASIVFVNNFAF-GP---------TVDH 150 (268)
Q Consensus 113 ----------------~~i~-------------~~~gD~~~l~~~---~~~~d~dvv~~~~~~~-~~---------~~~~ 150 (268)
.+++ |+++|+.+.... .....+|+|+++..++ .. ....
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 0155 999999874310 0112467888876432 11 2346
Q ss_pred HHHHHHhcCCCCcEEEEe
Q psy17227 151 ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 151 ~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+++++|||||+++++
T Consensus 196 ~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHhcCCCcEEEEe
Confidence 789999999999999975
No 191
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=3.7e-13 Score=119.00 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
..++.+|||||||+|.+++.+++..+..+|+|+|+|+.++..++ +++.... .+...++++++++|+.+++......
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~--~~~~~~~--~~~~~~~v~~~~~D~~~~~~~~~~~ 168 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSK--QHFPQIS--RSLADPRATVRVGDGLAFVRQTPDN 168 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHH--HHCHHHH--GGGGCTTEEEEESCHHHHHHSSCTT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHhHHhh--cccCCCcEEEEECcHHHHHHhccCC
Confidence 45678999999999999999987656667999999998666554 3332111 1122458999999998765420123
Q ss_pred ceEEEEEecccc-CcCH----HHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAF-GPTV----DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~-~~~~----~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...+ .+.. ...++++.++|||||++++.
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 578888876532 2221 57789999999999999975
No 192
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.41 E-value=1.4e-13 Score=117.89 Aligned_cols=107 Identities=14% Similarity=0.060 Sum_probs=70.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC---ccccc-
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE---EHREK- 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l---~~~~~- 130 (268)
++.+|||||||+|.++..++...+..+|+|+|+|+.++..|+ ++++ ..+. ..+++++++|+.+. +++..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~--~~~~----~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAK--KNVE----QNNL-SDLIKVVKVPQKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEECCTTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHH--HHHH----HcCC-CccEEEEEcchhhhhhhhhhccc
Confidence 578999999999999999888764445999999998655554 3333 2333 23699999998762 33321
Q ss_pred ccceEEEEEeccccCcC----------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPT----------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~----------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+|+|+++..++... ....+.+++++|||||.+.+.
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 02467888886544321 112356788999999998765
No 193
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.41 E-value=8.4e-13 Score=118.15 Aligned_cols=115 Identities=18% Similarity=0.118 Sum_probs=78.6
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+.+.+. ..++.+|||+|||+|.+++.+|+. +. +|+|||+|+.++..++ ++++ ..+....+++++++|+.+
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~-ga-~V~~VD~s~~al~~a~--~n~~----~~gl~~~~v~~i~~D~~~ 214 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAA-GA-EVTHVDASKKAIGWAK--ENQV----LAGLEQAPIRWICEDAMK 214 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT-TC-EEEEECSCHHHHHHHH--HHHH----HHTCTTSCEEEECSCHHH
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHH--HHHH----HcCCCccceEEEECcHHH
Confidence 3444443 457789999999999999998874 66 5999999998555544 4333 234322259999999987
Q ss_pred Ccccc--cccceEEEEEeccccC-----------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHRE--KITQASIVFVNNFAFG-----------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~--~~~d~dvv~~~~~~~~-----------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.... ....+|+|+++...+. .+....+.++.++|||||.|+++
T Consensus 215 ~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 215 FIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp HHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred HHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 53210 0124677887654321 23566788889999999997764
No 194
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.41 E-value=5.1e-13 Score=113.57 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
+.....+...+...++.+|||||||+|..+..+++..+ ..+|+|+|+++.++..++ ++++ ..+. ..++++++
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~--~~~~----~~g~-~~~v~~~~ 118 (239)
T 2hnk_A 46 PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVAR--KYWK----ENGL-ENKIFLKL 118 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHH--HHHH----HTTC-GGGEEEEE
T ss_pred HHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCCEEEEE
Confidence 33333444444566788999999999999999998865 446999999997544443 3332 2333 23699999
Q ss_pred cCCCCC-c-cccc------------c-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 120 GDFLTE-E-HREK------------I-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 120 gD~~~l-~-~~~~------------~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
+|+.+. + +... . ..+|+|+++.. .++....+.++.+.|||||++++.+
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD--KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC--HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 998762 2 1110 0 24688887632 3456788999999999999999863
No 195
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.40 E-value=1.5e-13 Score=112.82 Aligned_cols=115 Identities=11% Similarity=0.100 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
...+...+...+ .+.++|||||||+|-++..++...+..+++|+|+|+.|+.+++ +++. ..|.. .++++
T Consensus 36 ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar--~~~~----~~g~~-~~v~~-- 104 (200)
T 3fzg_A 36 LNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLS--SIIG----KLKTT-IKYRF-- 104 (200)
T ss_dssp HHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHH--HHHH----HSCCS-SEEEE--
T ss_pred HHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHH--HHHH----hcCCC-ccEEE--
Confidence 334445555555 5678999999999999999888776668999999998777765 3332 33432 25666
Q ss_pred cCCCCCcccccccceEEEEEecccc-CcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAF-GPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~-~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|....+.+ ..+|+|++..++| .++....+.++++.|||||.||+.
T Consensus 105 ~d~~~~~~~---~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 105 LNKESDVYK---GTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp ECCHHHHTT---SEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred ecccccCCC---CCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 565443222 3468888877743 355666788999999999999986
No 196
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.40 E-value=5.1e-13 Score=113.35 Aligned_cols=109 Identities=14% Similarity=0.127 Sum_probs=78.6
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c-cc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E-HR 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~-~~ 128 (268)
...++.+|||||||+|..++.+|+..+ ..+++|+|+|+.++..++ ++++ ..|. ..+++++++|+.+. + ++
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~--~~~~----~~g~-~~~i~~~~~d~~~~l~~l~ 141 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAK--KYWQ----KAGV-AEKISLRLGPALATLEQLT 141 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH--HHHH----HHTC-GGGEEEEESCHHHHHHHHH
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEEcCHHHHHHHHH
Confidence 345678999999999999999998764 346999999997555543 3332 2343 24799999998652 2 11
Q ss_pred ccc--cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 129 EKI--TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 129 ~~~--~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
... ..+|+|+++.. .++....+.++.+.|||||++++.+
T Consensus 142 ~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 142 QGKPLPEFDLIFIDAD--KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp TSSSCCCEEEEEECSC--GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred hcCCCCCcCEEEECCC--HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 111 34688887643 3556788999999999999999863
No 197
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.40 E-value=2.3e-12 Score=109.62 Aligned_cols=111 Identities=14% Similarity=0.197 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCC-CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhc-cccccEEEEE
Q psy17227 42 DLISRMIDQINAT-PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYG-KRHGEFRLVK 119 (268)
Q Consensus 42 ~~~~~ll~~l~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~i~~~~ 119 (268)
..+.++++.+++. ++.+|||||||+|.++..+++. |..+|+|||+|+.|+..++ ++..+ .. ....++++..
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~--~~~~~----~~~~~~~~~~~~~ 95 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKI--RSDER----VVVMEQFNFRNAV 95 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHH--HTCTT----EEEECSCCGGGCC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHH--HhCcc----ccccccceEEEeC
Confidence 3567788888765 4679999999999999998876 7656999999999766643 11000 00 0001222222
Q ss_pred -cCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 -GDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 -gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+...+ + |.+.+...+. .+...+.+++|+|||||++++.
T Consensus 96 ~~~~~~~~-----~--d~~~~D~v~~--~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 96 LADFEQGR-----P--SFTSIDVSFI--SLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGGCCSCC-----C--SEEEECCSSS--CGGGTHHHHHHHSCTTCEEEEE
T ss_pred HhHcCcCC-----C--CEEEEEEEhh--hHHHHHHHHHHhccCCCEEEEE
Confidence 2222111 1 2222222211 1367899999999999999875
No 198
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.40 E-value=7.3e-13 Score=114.06 Aligned_cols=105 Identities=21% Similarity=0.260 Sum_probs=76.5
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.+... +.++.+|||+|||+|.+++.+++ .+. +|+|+|+|+.++..++ +++.. .+. .++++++|+.+.
T Consensus 113 ~l~~~-~~~~~~VLDiGcG~G~l~~~la~-~g~-~v~gvDi~~~~v~~a~--~n~~~----~~~---~v~~~~~d~~~~- 179 (254)
T 2nxc_A 113 ALARH-LRPGDKVLDLGTGSGVLAIAAEK-LGG-KALGVDIDPMVLPQAE--ANAKR----NGV---RPRFLEGSLEAA- 179 (254)
T ss_dssp HHHHH-CCTTCEEEEETCTTSHHHHHHHH-TTC-EEEEEESCGGGHHHHH--HHHHH----TTC---CCEEEESCHHHH-
T ss_pred HHHHh-cCCCCEEEEecCCCcHHHHHHHH-hCC-eEEEEECCHHHHHHHH--HHHHH----cCC---cEEEEECChhhc-
Confidence 34443 67889999999999999998776 466 6999999998665554 33331 222 289999998762
Q ss_pred ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++. .+|+|+++...+ .....+.++.+.|||||+++++
T Consensus 180 ~~~~--~fD~Vv~n~~~~--~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 180 LPFG--PFDLLVANLYAE--LHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp GGGC--CEEEEEEECCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCC--CCCEEEECCcHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 3232 468888874432 2567789999999999999986
No 199
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.39 E-value=9.7e-13 Score=115.83 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhc-cccccEEEEEcCCCCCccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYG-KRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
.++.+|||||||+|.+++.+++..+..+|++||+|+.++.+++ +++.... .+ ...++++++++|+.+..- ....
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar--~~~~~~~--~~~~~~~rv~~~~~D~~~~l~-~~~~ 156 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCR--QYLPNHN--AGSYDDPRFKLVIDDGVNFVN-QTSQ 156 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHH--HHCHHHH--SSCTTCTTCCEECSCSCC----CCCC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHH--Hhhhhcc--cccccCCceEEEEChHHHHHh-hcCC
Confidence 4567999999999999999988766677999999998766665 3332210 00 123589999999987431 1123
Q ss_pred ceEEEEEecccc-CcC--H--HHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAF-GPT--V--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~-~~~--~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++.... .+. + ...++++.++|||||++++.
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 578898875522 121 1 56789999999999999975
No 200
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.38 E-value=4e-13 Score=121.13 Aligned_cols=108 Identities=13% Similarity=0.130 Sum_probs=80.6
Q ss_pred HHHHHc--CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 46 RMIDQI--NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 46 ~ll~~l--~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
.+++.+ ++.++.+|||||||+|.++..+++.++..+++++|+ +.++..++ ...+++++.+|+.
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------~~~~v~~~~~d~~ 246 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT--------------GNENLNFVGGDMF 246 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC--------------CCSSEEEEECCTT
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc--------------cCCCcEEEeCccC
Confidence 355555 456778999999999999999999887667999999 44222111 1246999999998
Q ss_pred CCcccccccceEEEEEecc-ccCcCHH--HHHHHHHhcCCC---CcEEEEeCCCCC
Q psy17227 124 TEEHREKITQASIVFVNNF-AFGPTVD--HALKERFQDLKD---GARIVSSKSFCP 173 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~-~~~~~~~--~~l~e~~r~Lkp---GG~~i~~~~~~~ 173 (268)
+ +++ ++|+|++..+ +++++.. ..+++++++||| ||++++.+...+
T Consensus 247 ~-~~~----~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 247 K-SIP----SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp T-CCC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred C-CCC----CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 8 654 2567777666 4566655 889999999999 999998755443
No 201
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.38 E-value=3.3e-13 Score=117.78 Aligned_cols=115 Identities=17% Similarity=0.057 Sum_probs=75.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE--EcC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV--KGD 121 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~--~gD 121 (268)
+..+++...++++.+|||||||+|.++..+++. .. |+|||+|+ |...++ +... .... ...++.|+ ++|
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~-V~gVD~s~-m~~~a~--~~~~---~~~~-~~~~v~~~~~~~D 140 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PN-VREVKAYT-LGTSGH--EKPR---LVET-FGWNLITFKSKVD 140 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TT-EEEEEEEC-CCCTTS--CCCC---CCCC-TTGGGEEEECSCC
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CC-EEEEECch-hhhhhh--hchh---hhhh-cCCCeEEEeccCc
Confidence 345666656778999999999999999988876 33 99999998 421111 0000 0000 01178999 999
Q ss_pred CCCCcccccccceEEEEEeccccCcCH----H---HHHHHHHhcCCCCc--EEEEeCCCCC
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFGPTV----D---HALKERFQDLKDGA--RIVSSKSFCP 173 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~~~~----~---~~l~e~~r~LkpGG--~~i~~~~~~~ 173 (268)
+.++| +. .+|+|+++...+.... . .++.++.++||||| .|++. .+.|
T Consensus 141 ~~~l~--~~--~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~-~~~~ 196 (276)
T 2wa2_A 141 VTKME--PF--QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK-VLNP 196 (276)
T ss_dssp GGGCC--CC--CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE-ESCC
T ss_pred HhhCC--CC--CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE-eCCC
Confidence 99876 33 3567777644222221 1 36888899999999 88874 3443
No 202
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.37 E-value=2e-12 Score=109.56 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+++|.+|||||||+|.+++.+|+..+..+|+|+|+++.+...|+ ++++ ..|. ..+++++++|..+...+++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~--~N~~----~~gl-~~~I~~~~gD~l~~~~~~~-- 89 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSAL--KNVS----EHGL-TSKIDVRLANGLSAFEEAD-- 89 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHH--HHHH----HTTC-TTTEEEEECSGGGGCCGGG--
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEECchhhcccccc--
Confidence 56789999999999999999988755667999999998555544 4443 3454 2479999999987654332
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|++.+. -..-....+.+..+.|+++|+||+.
T Consensus 90 ~~D~IviaGm-Gg~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 90 NIDTITICGM-GGRLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp CCCEEEEEEE-CHHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ccCEEEEeCC-chHHHHHHHHHHHHHhCcCCEEEEE
Confidence 2455554322 1122455567777899999999986
No 203
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.37 E-value=5.1e-13 Score=115.94 Aligned_cols=112 Identities=13% Similarity=0.012 Sum_probs=75.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE--Ec
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV--KG 120 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~--~g 120 (268)
.+..+++...++++++|||||||+|.++..+++. .. |+|||+++ |...+. +. . ..... ...++.++ ++
T Consensus 62 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~-V~gvD~s~-m~~~a~--~~-~--~~~~~-~~~~v~~~~~~~ 131 (265)
T 2oxt_A 62 KLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PH-VMDVRAYT-LGVGGH--EV-P--RITES-YGWNIVKFKSRV 131 (265)
T ss_dssp HHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TT-EEEEEEEC-CCCSSC--CC-C--CCCCB-TTGGGEEEECSC
T ss_pred HHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--Cc-EEEEECch-hhhhhh--hh-h--hhhhc-cCCCeEEEeccc
Confidence 3456666666788999999999999999988876 33 99999998 321111 00 0 00000 01178999 99
Q ss_pred CCCCCcccccccceEEEEEeccccCcCH----H---HHHHHHHhcCCCCc--EEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGPTV----D---HALKERFQDLKDGA--RIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~~~----~---~~l~e~~r~LkpGG--~~i~~ 168 (268)
|+.++| +. .+|+|+++...+.... . .++.++.++||||| .|++.
T Consensus 132 D~~~l~--~~--~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 132 DIHTLP--VE--RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp CTTTSC--CC--CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CHhHCC--CC--CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 999977 33 3567877644222221 1 36888899999999 88874
No 204
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.37 E-value=9.8e-12 Score=112.83 Aligned_cols=103 Identities=9% Similarity=-0.018 Sum_probs=76.3
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Ccc-cc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEH-RE 129 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~-~~ 129 (268)
+..++.+||||| |+|.+++.++...+..+|+|+|+|+.++..++ ++++ ..|. .+++++++|+.+ +|. .+
T Consensus 169 ~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~--~~~~----~~g~--~~v~~~~~D~~~~l~~~~~ 239 (373)
T 2qm3_A 169 GDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIE--KAAN----EIGY--EDIEIFTFDLRKPLPDYAL 239 (373)
T ss_dssp TCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHH--HHHH----HHTC--CCEEEECCCTTSCCCTTTS
T ss_pred CCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCC--CCEEEEEChhhhhchhhcc
Confidence 345788999999 99999999887644356999999998655544 4433 2343 289999999998 663 22
Q ss_pred cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEE
Q psy17227 130 KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARI 165 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~ 165 (268)
+ .+|+|+++..++.......+.+++++|||||++
T Consensus 240 ~--~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 240 H--KFDTFITDPPETLEAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp S--CBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCE
T ss_pred C--CccEEEECCCCchHHHHHHHHHHHHHcccCCeE
Confidence 2 467888887654444567789999999999954
No 205
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.37 E-value=3.3e-12 Score=111.90 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=81.6
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.+..+.++++.+++.++++|||||||+|.++..++.. +. +|+|+|+|+.++..++ +++. ..+. ..++++++
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~-~v~~vD~~~~~~~~a~--~~~~----~~~~-~~~v~~~~ 83 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AK-KVVACELDPRLVAELH--KRVQ----GTPV-ASKLQVLV 83 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SS-EEEEEESCHHHHHHHH--HHHT----TSTT-GGGEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CC-EEEEEECCHHHHHHHH--HHHH----hcCC-CCceEEEE
Confidence 4567788999999999999999999999999999886 44 4999999997554443 2221 1121 24899999
Q ss_pred cCCCCCcccccccceEEEEEeccccCcC--HHHHH--------------HHHH--hcCCCCcEEEE
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGPT--VDHAL--------------KERF--QDLKDGARIVS 167 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~~--~~~~l--------------~e~~--r~LkpGG~~i~ 167 (268)
+|+.+++++ .+|+|++|..+++.. ....+ +|+. ++|||||.++.
T Consensus 84 ~D~~~~~~~----~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 84 GDVLKTDLP----FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp SCTTTSCCC----CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred cceecccch----hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 999987754 346788876554432 12222 3443 58999998754
No 206
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.36 E-value=2.8e-12 Score=109.57 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.+|.+|||||||+|.+++.+|+..+..+|+|+|+++.++..|+ ++++ ..|.. .+++++++|..+...++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~--~N~~----~~gl~-~~I~v~~gD~l~~~~~~~~- 90 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ--KQVR----SSGLT-EQIDVRKGNGLAVIEKKDA- 90 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH--HHHH----HTTCT-TTEEEEECSGGGGCCGGGC-
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCCC-ceEEEEecchhhccCcccc-
Confidence 56789999999999999999988755667999999998555544 4443 34442 4799999999875543322
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|++... -..-....+.+..+.|+++++||+.
T Consensus 91 -~D~Iviagm-Gg~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 91 -IDTIVIAGM-GGTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp -CCEEEEEEE-CHHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred -ccEEEEeCC-chHHHHHHHHHHHHHhCCCCEEEEE
Confidence 455554322 1122455567778899999999986
No 207
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.36 E-value=1.1e-12 Score=117.55 Aligned_cols=111 Identities=16% Similarity=0.138 Sum_probs=79.2
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c-ccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E-HRE 129 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~-~~~ 129 (268)
...++.+|||||||+|.+++.+++..+..+|++||+|+.++.+|+ +++.+. ..+....+++++++|+.+. + +.+
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar--~~~~~~--~~gl~~~rv~~~~~D~~~~l~~~~~ 192 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSK--QFFPDV--AIGYEDPRVNLVIGDGVAFLKNAAE 192 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH--HHCHHH--HGGGGSTTEEEEESCHHHHHHTSCT
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHHHhh--ccccCCCcEEEEECCHHHHHHhccC
Confidence 345678999999999999999988666667999999998666654 333221 0133335899999998764 2 122
Q ss_pred cccceEEEEEeccc--cCcC---HHHHHHHHHhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFA--FGPT---VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~--~~~~---~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++... +..+ ....++++.++|||||++++.
T Consensus 193 --~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 193 --GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp --TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 247888887552 2122 367889999999999999984
No 208
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.36 E-value=5.3e-12 Score=110.23 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=76.2
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeC-CCChhHHHHHHHHHHHHH-HHhccc---cccEEEEEcC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEK-ADLPAKYAEMHTVFKRWM-QWYGKR---HGEFRLVKGD 121 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~-s~~~~~~a~~~~~~~~~~-~~~~~~---~~~i~~~~gD 121 (268)
+.......++.+|||||||+|.+++.+++ .+..+|+|+|+ |+.++..++ +++.... +..+.. ..+++++..|
T Consensus 71 l~~~~~~~~~~~vLDlG~G~G~~~~~~a~-~~~~~v~~~D~s~~~~~~~a~--~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 71 LCWQPELIAGKTVCELGAGAGLVSIVAFL-AGADQVVATDYPDPEILNSLE--SNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp HHHCGGGTTTCEEEETTCTTSHHHHHHHH-TTCSEEEEEECSCHHHHHHHH--HHHHTTCC----------CCCEEEECC
T ss_pred HHhcchhcCCCeEEEecccccHHHHHHHH-cCCCEEEEEeCCCHHHHHHHH--HHHHHhhhhhcccccCCCCCeEEEEec
Confidence 44444556888999999999999998776 46656999999 887555544 3331000 111211 1368888777
Q ss_pred CCCCc--c----cccccceEEEEE-eccccCcCHHHHHHHHHhcCC---C--CcEEEEe
Q psy17227 122 FLTEE--H----REKITQASIVFV-NNFAFGPTVDHALKERFQDLK---D--GARIVSS 168 (268)
Q Consensus 122 ~~~l~--~----~~~~~d~dvv~~-~~~~~~~~~~~~l~e~~r~Lk---p--GG~~i~~ 168 (268)
..+.. + .+. .+|+|++ +.++|.++....+..+.++|| | ||++++.
T Consensus 148 ~~~~~~~~~~~~~~~--~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 148 WGDSPDSLQRCTGLQ--RFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp TTSCTHHHHHHHSCS--SBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCCccHHHHhhccCC--CCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 65421 1 123 3566666 444566778889999999999 9 9987653
No 209
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.35 E-value=2.1e-12 Score=109.99 Aligned_cols=108 Identities=10% Similarity=0.053 Sum_probs=78.9
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-c-cc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-E-HR 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~-~~ 128 (268)
...++.+|||||||+|..++.+|+..+ ..+++++|+|+.+...++ ++++ ..|. ..+++++++|+.+. + +.
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~--~~~~----~~g~-~~~i~~~~gda~~~l~~l~ 139 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL--PFIR----KAGV-EHKINFIESDAMLALDNLL 139 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH--HHHH----HTTC-GGGEEEEESCHHHHHHHHH
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEEcCHHHHHHHHH
Confidence 345678999999999999999998765 456999999997555443 4333 3444 34799999999763 3 21
Q ss_pred cc---ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 129 EK---ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 129 ~~---~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.. ...+|+|++... ..+....+.++.+.|||||++++.
T Consensus 140 ~~~~~~~~fD~I~~d~~--~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDAD--KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HSTTCTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCCcCEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 00 135788988643 345677889999999999999985
No 210
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.35 E-value=1.9e-12 Score=114.54 Aligned_cols=107 Identities=15% Similarity=0.109 Sum_probs=72.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeC----CCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEK----ADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~----s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
..++++..++++.+|||||||+|.++..+|+. + . |+|||+ ++.++..+.+ .....++++|+++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~-~-V~gvD~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~ 138 (305)
T 2p41_A 72 RWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL-K-N-VREVKGLTKGGPGHEEPIPM----------STYGWNLVRLQSG 138 (305)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS-T-T-EEEEEEECCCSTTSCCCCCC----------CSTTGGGEEEECS
T ss_pred HHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-C-C-EEEEeccccCchhHHHHHHh----------hhcCCCCeEEEec
Confidence 34555544678999999999999999988876 3 3 999999 5532211100 0011247999999
Q ss_pred -CCCCCcccccccceEEEEEecccc----CcCHH---HHHHHHHhcCCCCcEEEEe
Q psy17227 121 -DFLTEEHREKITQASIVFVNNFAF----GPTVD---HALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 -D~~~l~~~~~~~d~dvv~~~~~~~----~~~~~---~~l~e~~r~LkpGG~~i~~ 168 (268)
|+.++|. . .+|+|+++..++ ..+.. .++.++.++|||||.|++.
T Consensus 139 ~D~~~l~~--~--~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 139 VDVFFIPP--E--RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCTTTSCC--C--CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cccccCCc--C--CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 9988762 2 457788865432 12222 4688888999999999874
No 211
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.34 E-value=6.3e-12 Score=109.07 Aligned_cols=118 Identities=14% Similarity=0.214 Sum_probs=75.9
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCC--CHHHHHHHHH-hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 43 LISRMIDQINAT-PDDVFVDLGSGV--GQVVLQVAAA-TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 43 ~~~~ll~~l~~~-~~~~vLDiGCG~--G~~~~~la~~-~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
++.+.+..+... ...+|||||||+ ++.+..+++. .+..+|+|||.|+.|+..++ +.+. +....+++|+
T Consensus 65 fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar--~~l~------~~~~~~~~~v 136 (277)
T 3giw_A 65 WMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQ--GLLA------STPEGRTAYV 136 (277)
T ss_dssp HHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTH--HHHC------CCSSSEEEEE
T ss_pred HHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHH--HHhc------cCCCCcEEEE
Confidence 344555555422 336899999997 3344445543 45557999999997544443 2221 1112479999
Q ss_pred EcCCCCCcc----c--ccccce---EEEEEeccc-cCcC---HHHHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEH----R--EKITQA---SIVFVNNFA-FGPT---VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~----~--~~~~d~---dvv~~~~~~-~~~~---~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+.+++. + ...+|+ .+|++++++ |.++ +...+.++++.|+|||.|+++
T Consensus 137 ~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 137 EADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp ECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred EecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 999998631 1 222331 145666664 5555 567899999999999999986
No 212
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.34 E-value=9.3e-12 Score=115.75 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=82.5
Q ss_pred HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+...+++.++++|||+|||+|+.+..++...+. ..|+|+|+|+.++.. ++++++ ..|. .+++++++|+.+
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~--~~~~~~----~~g~--~~v~~~~~D~~~ 321 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKR--LKDFVK----RMGI--KIVKPLVKDARK 321 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHH--HHHHHH----HTTC--CSEEEECSCTTC
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHH--HHHHHH----HcCC--CcEEEEEcChhh
Confidence 3455678999999999999999999999987654 569999999874433 334443 2343 479999999998
Q ss_pred Cc--ccccccceEEEEEeccc-------cCcCH----------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE--HREKITQASIVFVNNFA-------FGPTV----------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~--~~~~~~d~dvv~~~~~~-------~~~~~----------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
++ +++. .+|+|+++..| +.|+. ...+.++.+.|||||+++.+
T Consensus 322 ~~~~~~~~--~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~ 388 (450)
T 2yxl_A 322 APEIIGEE--VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYT 388 (450)
T ss_dssp CSSSSCSS--CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cchhhccC--CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76 3322 46788875433 12332 45688899999999999865
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=5.3e-12 Score=104.14 Aligned_cols=96 Identities=10% Similarity=0.006 Sum_probs=69.3
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
+..++.+|||+|||+|.++..++.. +..+|+|+|+|+.++..++ ++ ..+++++++|+.++|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~--~~-----------~~~~~~~~~d~~~~~----- 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAK--RN-----------CGGVNFMVADVSEIS----- 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHH--HH-----------CTTSEEEECCGGGCC-----
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHH--Hh-----------cCCCEEEECcHHHCC-----
Confidence 5668899999999999999988876 6656999999997544443 11 127899999998875
Q ss_pred cceEEEEEeccccCc-C--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGP-T--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~-~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++..+|.. + ....+.++.+++ |+.+++.
T Consensus 109 ~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 246888888765432 2 346788888888 5544443
No 214
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.33 E-value=2.3e-12 Score=112.32 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=74.8
Q ss_pred CCCEEEEEcCCCCH----HHHHHHHHhC----CcEEEEEeCCCChhHHHHHHH------------HHHHHH---HH--hc
Q psy17227 55 PDDVFVDLGSGVGQ----VVLQVAAATG----CKICWGVEKADLPAKYAEMHT------------VFKRWM---QW--YG 109 (268)
Q Consensus 55 ~~~~vLDiGCG~G~----~~~~la~~~~----~~~v~GiD~s~~~~~~a~~~~------------~~~~~~---~~--~~ 109 (268)
++.+|+|+|||||. +++.++...+ ..+|+|+|+|+.|+..|+... ..+++. .. .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45789999999998 6666666544 236999999998666655210 000000 00 00
Q ss_pred ---cc---cccEEEEEcCCCCCcccccccceEEEEEeccc-cCcC--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 110 ---KR---HGEFRLVKGDFLTEEHREKITQASIVFVNNFA-FGPT--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 110 ---~~---~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~-~~~~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.. ..+|+|.++|+.+.|++. ...+|+|+|.+++ |.++ ..+.+.++++.|||||.+++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~-~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNV-PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCC-CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCc-CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00 036999999999866541 1257889987663 3333 367789999999999999984
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.33 E-value=5.4e-12 Score=106.68 Aligned_cols=105 Identities=16% Similarity=0.218 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Ccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEHREKI 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~~~~~ 131 (268)
+.+|.+|||||||+|.+++.+|+..+..+|+|+|+++.++..|+ ++++ ..|.. .+++++++|..+ ++..+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~--~N~~----~~gl~-~~i~~~~~d~l~~l~~~~-- 83 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV--KNVE----AHGLK-EKIQVRLANGLAAFEETD-- 83 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH--HHHH----HTTCT-TTEEEEECSGGGGCCGGG--
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHH----HcCCC-ceEEEEECchhhhcccCc--
Confidence 46788999999999999999998766667999999998555544 4443 34542 479999999864 33211
Q ss_pred cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|++... -..-....+.+..+.|+|||++|+.
T Consensus 84 -~~D~IviaG~-Gg~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 84 -QVSVITIAGM-GGRLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp -CCCEEEEEEE-CHHHHHHHHHHTGGGCTTCCEEEEE
T ss_pred -CCCEEEEcCC-ChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 2555655432 1122456677778899999999986
No 216
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.33 E-value=5.4e-12 Score=117.16 Aligned_cols=120 Identities=23% Similarity=0.207 Sum_probs=86.4
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-------------CCcEEEEEeCCCChhHHHHHHHHHHHHHH
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-------------GCKICWGVEKADLPAKYAEMHTVFKRWMQ 106 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-------------~~~~v~GiD~s~~~~~~a~~~~~~~~~~~ 106 (268)
....+..+++.+...++.+|||.|||+|+++..+++.. ....++|+|+++.+..+|+++-.
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~------ 229 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY------ 229 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH------
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH------
Confidence 34556667777888889999999999999999888753 12239999999987777764332
Q ss_pred HhccccccEEEEEcCCCCCcccccccceEEEEEeccccCc---C---------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 107 WYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFGP---T---------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 107 ~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~---~---------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..|....++.+.++|....+... .+|+|++|..+... + ....+.++++.|||||++++.
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~~---~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPST---LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVV 306 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCSS---CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCcccC---CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEE
Confidence 23332126789999998766432 57889988654221 1 135688999999999998765
No 217
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.33 E-value=1.1e-11 Score=112.61 Aligned_cols=111 Identities=15% Similarity=0.072 Sum_probs=79.3
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
..+.....++..+ +.++.+|||+|||+|.+++.+|......+|+|+|+|+.++..|+ ++++ ..|. ..+++++
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~--~n~~----~~gl-~~~i~~~ 273 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE--MNAL----AAGV-LDKIKFI 273 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH--HHHH----HTTC-GGGCEEE
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH--HHHH----HcCC-CCceEEE
Confidence 4455566677777 88999999999999999999888654335999999998666554 3333 2343 2489999
Q ss_pred EcCCCCCcccccccceEEEEEeccccC-----cCH----HHHHHHHHhcC
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFG-----PTV----DHALKERFQDL 159 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~-----~~~----~~~l~e~~r~L 159 (268)
++|+.++++++. .+|+|++|..+.. ... ...+.++.++|
T Consensus 274 ~~D~~~~~~~~~--~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 274 QGDATQLSQYVD--SVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp ECCGGGGGGTCS--CEEEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred ECChhhCCcccC--CcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 999999886543 4678888765321 112 34556777888
No 218
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=8.4e-12 Score=109.44 Aligned_cols=128 Identities=11% Similarity=0.072 Sum_probs=83.5
Q ss_pred HHHhhcC--CccccccCCCCCCCCcccCcHH--HHHHHHHH-----cCCCCCCEEEEEcC------CCCHHHHHHHHHhC
Q psy17227 14 TYNQSVT--EPEKLNVYQPFSPFVYGETSFD--LISRMIDQ-----INATPDDVFVDLGS------GVGQVVLQVAAATG 78 (268)
Q Consensus 14 ~y~~~~~--~~~~~~~y~~~~~~~~g~~~~~--~~~~ll~~-----l~~~~~~~vLDiGC------G~G~~~~~la~~~~ 78 (268)
+|..... ++-.|..|..+.. .|...... ....++.. +.++++++|||||| |+|. ..+++..+
T Consensus 14 ~~~~~~~~~e~~~~~~Y~~~~~-~p~g~~~n~~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~ 90 (290)
T 2xyq_A 14 LYKMQRMLLEKCDLQNYGENAV-IPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP 90 (290)
T ss_dssp HHHTCCCCCCCCCCCSCCCCTT-SCTTCCHHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC
T ss_pred HHhhcccCccHhHHHhhhcCCc-CCCcccccHHHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC
Confidence 5555544 3434556665553 33333222 12234333 46889999999999 4476 44566666
Q ss_pred -CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE-EEcCCCCCcccccccceEEEEEeccccC-----------
Q psy17227 79 -CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL-VKGDFLTEEHREKITQASIVFVNNFAFG----------- 145 (268)
Q Consensus 79 -~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~-~~gD~~~l~~~~~~~d~dvv~~~~~~~~----------- 145 (268)
..+|+|+|+|+. ..+++| +++|+.++++. ..+|+|+++...+.
T Consensus 91 ~~~~V~gvDis~~---------------------v~~v~~~i~gD~~~~~~~---~~fD~Vvsn~~~~~~g~~~~d~~~~ 146 (290)
T 2xyq_A 91 TGTLLVDSDLNDF---------------------VSDADSTLIGDCATVHTA---NKWDLIISDMYDPRTKHVTKENDSK 146 (290)
T ss_dssp TTCEEEEEESSCC---------------------BCSSSEEEESCGGGCCCS---SCEEEEEECCCCCC---CCSCCCCC
T ss_pred CCCEEEEEECCCC---------------------CCCCEEEEECccccCCcc---CcccEEEEcCCccccccccccccch
Confidence 346999999984 026778 99999987754 24788888743221
Q ss_pred cC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 146 PT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 146 ~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ ....++++.++|||||+|++.
T Consensus 147 ~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 147 EGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp CTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 346789999999999999985
No 219
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.32 E-value=1.7e-11 Score=113.30 Aligned_cols=115 Identities=15% Similarity=0.166 Sum_probs=84.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
....+...++..++.+|||+|||+|+.+..++...+...|+|+|+|+.++..++ +++++ .|. +++++++|+
T Consensus 234 ~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~--~~~~~----~g~---~~~~~~~D~ 304 (429)
T 1sqg_A 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY--DNLKR----LGM---KATVKQGDG 304 (429)
T ss_dssp HHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH--HHHHH----TTC---CCEEEECCT
T ss_pred HHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HHHHH----cCC---CeEEEeCch
Confidence 344466677889999999999999999999998765456999999998555443 44432 332 579999999
Q ss_pred CCCc--ccccccceEEEEEecccc-------CcCH----------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEE--HREKITQASIVFVNNFAF-------GPTV----------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~--~~~~~~d~dvv~~~~~~~-------~~~~----------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+++ +++. .+|+|+++..|. .++. ...+.++.+.|||||+++.+
T Consensus 305 ~~~~~~~~~~--~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvys 373 (429)
T 1sqg_A 305 RYPSQWCGEQ--QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 (429)
T ss_dssp TCTHHHHTTC--CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhchhhcccC--CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9876 3322 467888765432 2332 35678889999999999865
No 220
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.31 E-value=7.9e-12 Score=108.97 Aligned_cols=108 Identities=20% Similarity=0.222 Sum_probs=79.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.++.+. +++|.+|||+|||+|.+++.+|+. |..+|+++|+||.++..++ ++++ .++. .++++++++|+.+
T Consensus 117 ~ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~--~N~~----~N~v-~~~v~~~~~D~~~ 186 (278)
T 3k6r_A 117 VRMAKV--AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLV--ENIH----LNKV-EDRMSAYNMDNRD 186 (278)
T ss_dssp HHHHHH--CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHH--HHHH----HTTC-TTTEEEECSCTTT
T ss_pred HHHHHh--cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEeCcHHH
Confidence 345555 578999999999999999998875 5556999999997555443 4443 3444 3579999999998
Q ss_pred CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++.. ..+|.|+++.. +.....+....+.|||||.+.++
T Consensus 187 ~~~~---~~~D~Vi~~~p---~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 187 FPGE---NIADRILMGYV---VRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CCCC---SCEEEEEECCC---SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred hccc---cCCCEEEECCC---CcHHHHHHHHHHHcCCCCEEEEE
Confidence 7642 24678887744 33445677788999999998765
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.30 E-value=2.7e-12 Score=113.52 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Ccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEHREKI 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~~~~~ 131 (268)
..++.+|||||||+|.+++.+++..+..+|++||+|+.++.+++ +++.... .+...++++++++|+.+ ++..+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar--~~~~~~~--~~~~~~rv~v~~~Da~~~l~~~~-- 166 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSK--KFLPGMA--IGYSSSKLTLHVGDGFEFMKQNQ-- 166 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH--HHCHHHH--GGGGCTTEEEEESCHHHHHHTCS--
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHhHHhh--cccCCCcEEEEECcHHHHHhhCC--
Confidence 45678999999999999999987656667999999998666554 3332210 12224689999999876 33222
Q ss_pred cceEEEEEeccccC-c----CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFG-P----TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~-~----~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++...+. + .....++++.+.|||||++++.
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 35788998765322 1 1245689999999999999975
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.30 E-value=2.3e-12 Score=112.66 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc-------ccccEEEEEcCCCCC
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK-------RHGEFRLVKGDFLTE 125 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~-------~~~~i~~~~gD~~~l 125 (268)
..++.+|||||||+|.+++.+++. +..+|++||+++.++.+++ +++ +. ..+. ..++++++++|+.+.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar--~~~-~~--~~~l~~~~~~~~~~~v~~~~~D~~~~ 146 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSK--DLI-KI--DNGLLEAMLNGKHEKAKLTIGDGFEF 146 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHH--HHT-CT--TTTHHHHHHTTCCSSEEEEESCHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHH--HHH-hh--ccccccccccCCCCcEEEEECchHHH
Confidence 346689999999999999998887 7767999999998665554 322 10 0011 235899999998653
Q ss_pred cccccccceEEEEEeccccC-c--C--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNFAFG-P--T--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~~~~-~--~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+ ..+|+|+++...+. + . ....++++.+.|||||++++.
T Consensus 147 l~~~--~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 147 IKNN--RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp HHHC--CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred hccc--CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 2112 35788988766322 1 1 256789999999999999975
No 223
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.30 E-value=6.1e-12 Score=115.02 Aligned_cols=115 Identities=20% Similarity=0.261 Sum_probs=81.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+ .+++.+|||+|||+|.+++.+|.. |+.+|+|+|+|+.++..++ ++++ ..+.. .+++|+++|+.+
T Consensus 208 ~~~~~~~-~~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~--~n~~----~n~~~-~~v~~~~~d~~~ 278 (396)
T 2as0_A 208 RLALEKW-VQPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAK--ENAK----LNGVE-DRMKFIVGSAFE 278 (396)
T ss_dssp HHHHGGG-CCTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHH--HHHH----HTTCG-GGEEEEESCHHH
T ss_pred HHHHHHH-hhCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHH--HHHH----HcCCC-ccceEEECCHHH
Confidence 4445444 348899999999999999998875 6767999999997555543 4433 23432 389999999987
Q ss_pred Cccc--ccccceEEEEEeccccC----------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHR--EKITQASIVFVNNFAFG----------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~--~~~~d~dvv~~~~~~~~----------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+... .....+|+|+++...+. .+....+.++.+.|||||.++++
T Consensus 279 ~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 279 EMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp HHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5321 11235788988765443 23456678889999999998865
No 224
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.30 E-value=3.5e-12 Score=111.18 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREKIT 132 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~~~ 132 (268)
.++.+|||||||+|.+++.+++..+..+|++||+++.++.+++ +++.... .+...++++++++|+.+. +..+ .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar--~~~~~~~--~~~~~~rv~v~~~D~~~~l~~~~--~ 147 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSK--KFLPSIA--GKLDDPRVDVQVDDGFMHIAKSE--N 147 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHH--HHCHHHH--TTTTSTTEEEEESCSHHHHHTCC--S
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHH--HHhHhhc--cccCCCceEEEECcHHHHHhhCC--C
Confidence 3567999999999999999887657667999999998666654 3332210 122346899999998763 3222 3
Q ss_pred ceEEEEEeccccC-cC----HHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFG-PT----VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~-~~----~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...+. +. ....++++.+.|||||++++.
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5788998765322 11 257889999999999999985
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.30 E-value=2.6e-12 Score=114.07 Aligned_cols=109 Identities=15% Similarity=0.086 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhc-cccccEEEEEcCCCCC-cccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYG-KRHGEFRLVKGDFLTE-EHREKI 131 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~i~~~~gD~~~l-~~~~~~ 131 (268)
.++.+|||||||+|.+++.+++..+..+|++||+|+.++..++ +++.+. ..+ ...++++++++|+.+. +..+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar--~~~~~~--~~~~~~~~~v~~~~~D~~~~l~~~~-- 149 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAK--RHMPEW--HQGAFDDPRAVLVIDDARAYLERTE-- 149 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHH--HHCHHH--HTTGGGCTTEEEEESCHHHHHHHCC--
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHH--HHhHhh--ccccccCCceEEEEchHHHHHHhcC--
Confidence 4568999999999999999988656667999999998665554 333210 011 1235899999999773 3322
Q ss_pred cceEEEEEeccccC---c---C--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFG---P---T--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~---~---~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++...+. . . ....++++.+.|||||++++.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 35788988866433 1 1 367789999999999999975
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.30 E-value=9.4e-12 Score=113.48 Aligned_cols=116 Identities=15% Similarity=0.133 Sum_probs=78.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+- .++.+|||+|||+|.+++.+|+. ++.+|+|+|+|+.++..|+ ++++ ..+....+++|+++|+.+
T Consensus 203 ~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~--~N~~----~n~~~~~~v~~~~~D~~~ 274 (385)
T 2b78_A 203 RNELINGS-AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSL--AHFE----ANHLDMANHQLVVMDVFD 274 (385)
T ss_dssp HHHHHHTT-TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHH--HHHH----HTTCCCTTEEEEESCHHH
T ss_pred HHHHHHHh-cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHH--HHHH----HcCCCccceEEEECCHHH
Confidence 34444331 67889999999999999998874 6656999999998666554 4443 234321289999999977
Q ss_pred C-cc-cccccceEEEEEecccc------CcCHHH----HHHHHHhcCCCCcEEEEe
Q psy17227 125 E-EH-REKITQASIVFVNNFAF------GPTVDH----ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l-~~-~~~~~d~dvv~~~~~~~------~~~~~~----~l~e~~r~LkpGG~~i~~ 168 (268)
. +. ......+|+|+++...+ ..+... .+.++.+.|||||.++++
T Consensus 275 ~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~ 330 (385)
T 2b78_A 275 YFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAS 330 (385)
T ss_dssp HHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 31 11112578898875542 233333 456667999999999876
No 227
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.30 E-value=4.2e-12 Score=111.84 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREKIT 132 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~~~ 132 (268)
.++.+|||||||+|.+++.+++..+..+|+++|+|+.++.+++ +++.+.. .+...++++++++|+.+. +..+ .
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~--~~~~~~~--~~~~~~~v~~~~~D~~~~l~~~~--~ 162 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAAR--KYLKQTS--CGFDDPRAEIVIANGAEYVRKFK--N 162 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHH--HHCHHHH--GGGGCTTEEEEESCHHHHGGGCS--S
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHH--HHhHhhc--cccCCCceEEEECcHHHHHhhCC--C
Confidence 4557999999999999999888656667999999998665554 3332210 122235899999998763 3222 3
Q ss_pred ceEEEEEeccccCc------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGP------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...++. .....++++.+.|||||++++.
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 47888887543211 1267789999999999999985
No 228
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.29 E-value=3.4e-11 Score=99.62 Aligned_cols=102 Identities=18% Similarity=0.140 Sum_probs=72.1
Q ss_pred HHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 49 DQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
...+..++.+|||+|||+|.++..+++. +..+|+|+|+|+.++..++ ++++ ..+. +++++++|+.+++
T Consensus 43 ~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~--~~~~----~~~~---~~~~~~~d~~~~~-- 110 (207)
T 1wy7_A 43 YSLGDIEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLI--ENLG----EFKG---KFKVFIGDVSEFN-- 110 (207)
T ss_dssp HHTTSSTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHH--HHTG----GGTT---SEEEEESCGGGCC--
T ss_pred HHcCCCCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH--HHHH----HcCC---CEEEEECchHHcC--
Confidence 3335668899999999999999998875 5556999999997544443 3222 1221 7999999998865
Q ss_pred ccccceEEEEEeccccCc---CHHHHHHHHHhcCCCCcEEEE
Q psy17227 129 EKITQASIVFVNNFAFGP---TVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 129 ~~~~d~dvv~~~~~~~~~---~~~~~l~e~~r~LkpGG~~i~ 167 (268)
. .+|+|+++..++.. .....+.++.+.+ |+.+++
T Consensus 111 -~--~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 111 -S--RVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp -C--CCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred -C--CCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 2 45788888765432 2456678888888 665554
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.28 E-value=1.8e-11 Score=109.78 Aligned_cols=110 Identities=14% Similarity=0.152 Sum_probs=78.1
Q ss_pred HHHHc-CCCCCCEEEEEcCCCCHHHHHHHHHhCC-----cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 47 MIDQI-NATPDDVFVDLGSGVGQVVLQVAAATGC-----KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 47 ll~~l-~~~~~~~vLDiGCG~G~~~~~la~~~~~-----~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
++..+ +..++.+|||+|||+|.++..+++..+. ..++|+|+++.+..+|+++. . ..|. ++.++++
T Consensus 121 ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~--~----~~g~---~~~i~~~ 191 (344)
T 2f8l_A 121 LLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA--D----LQRQ---KMTLLHQ 191 (344)
T ss_dssp HHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH--H----HHTC---CCEEEES
T ss_pred HHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHH--H----hCCC---CceEEEC
Confidence 44443 4567889999999999999998887642 45999999998777766432 2 1232 6889999
Q ss_pred CCCCCcccccccceEEEEEeccc-cCcCH------------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNNFA-FGPTV------------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~-~~~~~------------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
|...... . ..+|+|++|..+ +.+.. ...+.++.+.|||||++++.
T Consensus 192 D~l~~~~-~--~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 192 DGLANLL-V--DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp CTTSCCC-C--CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCccc-c--CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 9876332 1 357889988653 22111 14578889999999998865
No 230
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=4.9e-12 Score=112.10 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=74.7
Q ss_pred CEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEE
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASI 136 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dv 136 (268)
.+|||||||+|.+++.+++.++..++++||+++.++.+++ +++. . ....+++++++|+.++.-......+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar--~~~~----~--~~~~rv~v~~~Da~~~l~~~~~~~fDv 162 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSR--EWFD----I--PRAPRVKIRVDDARMVAESFTPASRDV 162 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHH--HHSC----C--CCTTTEEEEESCHHHHHHTCCTTCEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHH--Hhcc----c--cCCCceEEEECcHHHHHhhccCCCCCE
Confidence 4899999999999999998765556999999998665554 2221 0 113589999999976421111135788
Q ss_pred EEEeccccC--cC---HHHHHHHHHhcCCCCcEEEEe
Q psy17227 137 VFVNNFAFG--PT---VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 137 v~~~~~~~~--~~---~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+++.+.+. +. ....++++.++|||||++++.
T Consensus 163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998765332 11 267789999999999999975
No 231
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.27 E-value=4.1e-12 Score=113.16 Aligned_cols=109 Identities=15% Similarity=0.171 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREKIT 132 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~~~ 132 (268)
.++.+|||||||+|.+++.+++..+..+|+++|+|+.++..++ +++... ..+...++++++++|+.+. +..+ .
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar--~~~~~~--~~~~~~~~v~~~~~D~~~~l~~~~--~ 188 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK--IYFKNI--SCGYEDKRVNVFIEDASKFLENVT--N 188 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHH--HHCTTT--SGGGGSTTEEEEESCHHHHHHHCC--S
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHHHhh--ccccCCCcEEEEEccHHHHHhhcC--C
Confidence 4568999999999999999887656667999999998655554 322210 0112235899999998763 2222 3
Q ss_pred ceEEEEEecccc-Cc--CH--HHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAF-GP--TV--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~-~~--~~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++.... .+ .. ...++++.+.|||||++++.
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 578898876421 11 12 67789999999999999984
No 232
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.27 E-value=1.4e-11 Score=105.48 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=67.8
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
.....+..+++.+++.++++|||||||+|.++..++.. +. +|+|+|+|+.++..++ +++. ..++++++
T Consensus 14 ~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~-~v~~vD~~~~~~~~a~--~~~~--------~~~~v~~~ 81 (244)
T 1qam_A 14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CN-FVTAIEIDHKLCKTTE--NKLV--------DHDNFQVL 81 (244)
T ss_dssp CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SS-EEEEECSCHHHHHHHH--HHTT--------TCCSEEEE
T ss_pred CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CC-eEEEEECCHHHHHHHH--Hhhc--------cCCCeEEE
Confidence 34567788999999999999999999999999999876 44 4999999997544433 2211 13589999
Q ss_pred EcCCCCCcccccccceEEEEEecccc
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAF 144 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~ 144 (268)
++|+.++++++. .++ .|++|..++
T Consensus 82 ~~D~~~~~~~~~-~~~-~vv~nlPy~ 105 (244)
T 1qam_A 82 NKDILQFKFPKN-QSY-KIFGNIPYN 105 (244)
T ss_dssp CCCGGGCCCCSS-CCC-EEEEECCGG
T ss_pred EChHHhCCcccC-CCe-EEEEeCCcc
Confidence 999999887532 244 455564443
No 233
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.27 E-value=2.5e-11 Score=113.55 Aligned_cols=112 Identities=16% Similarity=0.167 Sum_probs=80.9
Q ss_pred HHHHcCCC--CCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 47 MIDQINAT--PDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 47 ll~~l~~~--~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+...++.. +|.+|||+|||+|+.+..+|...+ ...|+|+|+|+.++.. +++++++ .|. .+++++++|+.
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~--~~~n~~r----~g~--~nv~~~~~D~~ 178 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKV--LHANISR----CGI--SNVALTHFDGR 178 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHH--HHHHHHH----HTC--CSEEEECCCST
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH--HHHHHHH----cCC--CcEEEEeCCHH
Confidence 33456777 999999999999999999998764 3469999999974444 3344432 343 47999999999
Q ss_pred CCcc-cccccceEEEEEecccc-------CcC----------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEH-REKITQASIVFVNNFAF-------GPT----------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~-~~~~~d~dvv~~~~~~~-------~~~----------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++. .+. .+|+|+++..|. .++ ....+.++++.|||||+++.+
T Consensus 179 ~~~~~~~~--~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 179 VFGAAVPE--MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp THHHHSTT--CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Hhhhhccc--cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 8764 222 467888864431 122 134578888999999999864
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.27 E-value=1.2e-11 Score=113.00 Aligned_cols=115 Identities=10% Similarity=0.104 Sum_probs=81.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+ .++.+|||+|||+|.+++.+|+. |+.+|+|+|+|+.++..++ ++++ ..+....+++|+++|+.+
T Consensus 212 ~~~l~~~--~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~--~n~~----~ngl~~~~v~~~~~D~~~ 282 (396)
T 3c0k_A 212 RLATRRY--VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIAR--QNVE----LNKLDLSKAEFVRDDVFK 282 (396)
T ss_dssp HHHHHHH--CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHH--HHHH----HTTCCGGGEEEEESCHHH
T ss_pred HHHHHHh--hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHH--HHHH----HcCCCccceEEEECCHHH
Confidence 3444444 57889999999999999998874 5656999999997555543 4443 233301389999999987
Q ss_pred Cccc--ccccceEEEEEeccccC----------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHR--EKITQASIVFVNNFAFG----------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~--~~~~d~dvv~~~~~~~~----------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+... .....+|+|+++...+. ......+.++.+.|||||.++++
T Consensus 283 ~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 338 (396)
T 3c0k_A 283 LLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTF 338 (396)
T ss_dssp HHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5321 11135788998754332 34567788899999999999875
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.27 E-value=9.4e-12 Score=115.77 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=81.2
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+...++..+|.+|||+|||+|+.+..+|...+. ..|+|+|+|+.++.. +++++++ .|. . +.++++|+.++
T Consensus 93 ~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~--a~~n~~r----~G~--~-v~~~~~Da~~l 163 (464)
T 3m6w_A 93 VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRG--LLENVER----WGA--P-LAVTQAPPRAL 163 (464)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHH--HHHHHHH----HCC--C-CEEECSCHHHH
T ss_pred HHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHH--HHHHHHH----cCC--e-EEEEECCHHHh
Confidence 455678899999999999999999999987653 469999999974444 3344442 343 3 99999999887
Q ss_pred c-ccccccceEEEEEecccc-------CcCH----------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 126 E-HREKITQASIVFVNNFAF-------GPTV----------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~-~~~~~~d~dvv~~~~~~~-------~~~~----------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ +... .+|+|+++..|- .++. ...+.++.+.|||||+++.+
T Consensus 164 ~~~~~~--~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys 228 (464)
T 3m6w_A 164 AEAFGT--YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS 228 (464)
T ss_dssp HHHHCS--CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhccc--cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6 2222 467888765441 1222 55678888999999999854
No 236
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.27 E-value=6.4e-12 Score=109.91 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=78.0
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccc
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREK 130 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~ 130 (268)
...++.+|||||||+|.+++.+++..+..+++++|+++.++.+++ +++... ..+...++++++++|+.+. +..+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~--~~~~~~--~~~~~~~~v~~~~~D~~~~l~~~~- 149 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK--IYFKNI--SCGYEDKRVNVFIEDASKFLENVT- 149 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH--HHCTTT--SGGGGSTTEEEEESCHHHHHHHCC-
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHhHHh--ccccCCCcEEEEECChHHHHHhCC-
Confidence 345678999999999999999887655667999999997555544 322110 0011235899999999763 2212
Q ss_pred ccceEEEEEeccccC-c--CH--HHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFG-P--TV--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~-~--~~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+++.+.+. + .+ ...++++.+.|||||++++.
T Consensus 150 -~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 150 -NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp -SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 35788888765321 2 22 57889999999999999976
No 237
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.26 E-value=6e-13 Score=107.64 Aligned_cols=90 Identities=11% Similarity=0.013 Sum_probs=68.3
Q ss_pred HHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc-
Q psy17227 49 DQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH- 127 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~- 127 (268)
..+++++|++|||||||. +++|+|+.|+..++ ++. ..+++++++|+.++++
T Consensus 6 ~~~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~--~~~----------~~~~~~~~~d~~~~~~~ 57 (176)
T 2ld4_A 6 ADFGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQ--ALT----------GNEGRVSVENIKQLLQS 57 (176)
T ss_dssp TTTTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHH--HHT----------TTTSEEEEEEGGGGGGG
T ss_pred hccCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHH--Hhc----------ccCcEEEEechhcCccc
Confidence 446789999999999996 23888887544433 211 1258999999999886
Q ss_pred --cccccceEEEEEecc-ccC-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 128 --REKITQASIVFVNNF-AFG-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 128 --~~~~~d~dvv~~~~~-~~~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+++ .+|+|+++.. +|. ++....+++++|+|||||+|++.
T Consensus 58 ~~~~~--~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 58 AHKES--SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp CCCSS--CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCC--CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 444 3567777554 555 78999999999999999999985
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=1.5e-11 Score=108.49 Aligned_cols=93 Identities=10% Similarity=0.160 Sum_probs=66.1
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
.+..+..+++.+++.++++|||||||+|.++..++.. +. +|+|+|+|+.++..++ +++. ..+ ..++++++
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~-~v~~vDi~~~~~~~a~--~~~~----~~~--~~~v~~~~ 96 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AK-KVITIDIDSRMISEVK--KRCL----YEG--YNNLEVYE 96 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SS-EEEEECSCHHHHHHHH--HHHH----HTT--CCCEEC--
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CC-EEEEEECCHHHHHHHH--HHHH----HcC--CCceEEEE
Confidence 3556778889999999999999999999999998875 44 4999999997555443 3322 122 25899999
Q ss_pred cCCCCCcccccccceEEEEEeccccCc
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGP 146 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~ 146 (268)
+|+.++++. .+|+|+++..+++.
T Consensus 97 ~D~~~~~~~----~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 97 GDAIKTVFP----KFDVCTANIPYKIS 119 (299)
T ss_dssp --CCSSCCC----CCSEEEEECCGGGH
T ss_pred CchhhCCcc----cCCEEEEcCCcccc
Confidence 999988753 35678888665543
No 239
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.26 E-value=3.7e-12 Score=113.10 Aligned_cols=109 Identities=14% Similarity=0.155 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-ccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EHREKIT 132 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~~~~~~ 132 (268)
.++.+|||||||+|.+++.+++..+..+|+++|+|+.++.+|+ +++... ..+...++++++++|+.+. +..+ .
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar--~~~~~~--~~~~~~~rv~~~~~D~~~~l~~~~--~ 180 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAK--KFLPGM--SCGFSHPKLDLFCGDGFEFLKNHK--N 180 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHH--HHCTTT--SGGGGCTTEEEECSCHHHHHHHCT--T
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHH--HHHHHh--ccccCCCCEEEEEChHHHHHHhcC--C
Confidence 4567999999999999999988666667999999997555554 332210 0022235899999999763 3222 3
Q ss_pred ceEEEEEeccccC-cC--H--HHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFG-PT--V--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~-~~--~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...+. +. + ...++++.+.|||||++++.
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp CEEEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 4788988765321 11 1 56788999999999999985
No 240
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.25 E-value=7e-11 Score=103.90 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=72.3
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
..+..+.++++.+++.++++|||||||+|.++..+++. +. +|+|||+++.++..++ +++. ..++++++
T Consensus 34 ~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~-~V~aVEid~~li~~a~--~~~~--------~~~~v~vi 101 (295)
T 3gru_A 34 IDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AK-KVYVIEIDKSLEPYAN--KLKE--------LYNNIEII 101 (295)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SS-EEEEEESCGGGHHHHH--HHHH--------HCSSEEEE
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CC-EEEEEECCHHHHHHHH--HHhc--------cCCCeEEE
Confidence 34567788999999999999999999999999999886 44 4999999998665554 3222 13589999
Q ss_pred EcCCCCCcccccccceEEEEEeccccC
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFG 145 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~ 145 (268)
++|+.++++++.. +|+|++|..++.
T Consensus 102 ~gD~l~~~~~~~~--fD~Iv~NlPy~i 126 (295)
T 3gru_A 102 WGDALKVDLNKLD--FNKVVANLPYQI 126 (295)
T ss_dssp ESCTTTSCGGGSC--CSEEEEECCGGG
T ss_pred ECchhhCCcccCC--ccEEEEeCcccc
Confidence 9999998876543 467777755543
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.24 E-value=1e-11 Score=112.99 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=75.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EKIT 132 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~~~ 132 (268)
++.+|||+|||+|.+++.+|.. ..+|+|+|+|+.++..++ ++++ ..+. .+++|+++|+.++... ....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~--~n~~----~n~~--~~~~~~~~d~~~~~~~~~~~~~ 278 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAE--ENAR----LNGL--GNVRVLEANAFDLLRRLEKEGE 278 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHH--HHHH----HTTC--TTEEEEESCHHHHHHHHHHTTC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHH--HHHH----HcCC--CCceEEECCHHHHHHHHHhcCC
Confidence 7889999999999999999886 445999999997555543 4433 2333 3599999999875321 0123
Q ss_pred ceEEEEEeccccC----------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFG----------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~----------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...+. ......+.++.+.|||||.++++
T Consensus 279 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 324 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATA 324 (382)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5788998765443 22455678888999999999876
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.24 E-value=1.3e-11 Score=110.60 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=73.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.++.+|||+|||+|.+++. |+ +..+|+|+|+|+.++..++ ++++ ..+. ..+++++++|+.++. .
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~--~n~~----~n~l-~~~v~~~~~D~~~~~-----~ 257 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLK--KNIK----LNKL-EHKIIPILSDVREVD-----V 257 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHH--HHHH----HTTC-TTTEEEEESCGGGCC-----C
T ss_pred cCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHH--HHHH----HcCC-CCcEEEEECChHHhc-----C
Confidence 36889999999999999998 76 4556999999997555544 4433 2333 247999999998765 3
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++...+ ....+..+.+.|+|||.+++.
T Consensus 258 ~fD~Vi~dpP~~---~~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 258 KGNRVIMNLPKF---AHKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp CEEEEEECCTTT---GGGGHHHHHHHEEEEEEEEEE
T ss_pred CCcEEEECCcHh---HHHHHHHHHHHcCCCCEEEEE
Confidence 568888874433 236778888999999999875
No 243
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=2.2e-11 Score=111.33 Aligned_cols=111 Identities=16% Similarity=0.176 Sum_probs=76.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+ .++|.+|||+|||+|.+++.+|+. |.. |+|+|+|+.++..++ ++++ ..+. ..++.++|+.+
T Consensus 205 r~~l~~~-~~~g~~VLDlg~GtG~~sl~~a~~-ga~-V~avDis~~al~~a~--~n~~----~ng~---~~~~~~~D~~~ 272 (393)
T 4dmg_A 205 RRLFEAM-VRPGERVLDVYSYVGGFALRAARK-GAY-ALAVDKDLEALGVLD--QAAL----RLGL---RVDIRHGEALP 272 (393)
T ss_dssp HHHHHTT-CCTTCEEEEESCTTTHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----HHTC---CCEEEESCHHH
T ss_pred HHHHHHH-hcCCCeEEEcccchhHHHHHHHHc-CCe-EEEEECCHHHHHHHH--HHHH----HhCC---CCcEEEccHHH
Confidence 3444433 456999999999999999998874 776 999999998555544 4443 2333 23577999987
Q ss_pred CcccccccceEEEEEeccccCc----------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGP----------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~----------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.-... ..+|+|+++..++.. +....+..+.+.|||||++++.
T Consensus 273 ~l~~~~-~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 273 TLRGLE-GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp HHHTCC-CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHhc-CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 431111 127889988665442 2345677788999999999854
No 244
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.23 E-value=2.4e-12 Score=110.15 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=81.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
...+..+++.+++.++++|||||||+|.++..++.. +. +|+|+|+|+.++..++ +++. ...+++++++
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~-~v~~id~~~~~~~~a~--~~~~--------~~~~v~~~~~ 82 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SK-QVTSIELDSHLFNLSS--EKLK--------LNTRVTLIHQ 82 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SS-EEEESSSSCSSSSSSS--CTTT--------TCSEEEECCS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CC-eEEEEECCHHHHHHHH--HHhc--------cCCceEEEEC
Confidence 345678889999999999999999999999998886 44 4999999998766554 1110 1358999999
Q ss_pred CCCCCcccccccceEEEEEeccccCcC------------HHHHH----HHHHhcCCCCcEEEEe
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGPT------------VDHAL----KERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~~------------~~~~l----~e~~r~LkpGG~~i~~ 168 (268)
|+.+++++++ ..+ .|++|..++... ....+ +.+.|+|||||++++.
T Consensus 83 D~~~~~~~~~-~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 83 DILQFQFPNK-QRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CCTTTTCCCS-SEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ChhhcCcccC-CCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 9999886531 234 455664433221 11122 4578999999998765
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.23 E-value=2e-11 Score=113.41 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=81.3
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+...++..+|++|||+|||+|+.+..+|...+. ..|+|+|+|+.++.. +++++++ .|. .++.++++|+.++
T Consensus 97 ~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~--~~~n~~r----~g~--~nv~v~~~Da~~l 168 (456)
T 3m4x_A 97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKI--LSENIER----WGV--SNAIVTNHAPAEL 168 (456)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHH--HHHHHHH----HTC--SSEEEECCCHHHH
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHH--HHHHHHH----cCC--CceEEEeCCHHHh
Confidence 455678899999999999999999999987643 469999999874443 4454443 443 4799999999876
Q ss_pred cc-cccccceEEEEEeccccC-------cCH----------------HHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EH-REKITQASIVFVNNFAFG-------PTV----------------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~-~~~~~d~dvv~~~~~~~~-------~~~----------------~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. .+ ..+|+|+++..|.. ++. ...+.++.+.|||||+++.+
T Consensus 169 ~~~~~--~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 233 (456)
T 3m4x_A 169 VPHFS--GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS 233 (456)
T ss_dssp HHHHT--TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhcc--ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 52 22 24688988765321 111 14578888999999999854
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.22 E-value=3.1e-11 Score=110.57 Aligned_cols=109 Identities=17% Similarity=0.079 Sum_probs=80.2
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
....+..+++.+...++.+|||+|||+|.++..+++.. +...++|+|+++.++.+| .+++++
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------------~~~~~~ 86 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------------PWAEGI 86 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------------TTEEEE
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------------CCCcEE
Confidence 34556677888876677899999999999999988876 345699999999744332 378999
Q ss_pred EcCCCCCcccccccceEEEEEeccccC------------cCHH------------------HHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNFAFG------------PTVD------------------HALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~~~~------------~~~~------------------~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+.+.+.. ..+|+|++|..+.. .+.. ..+..+.+.|||||++++.
T Consensus 87 ~~D~~~~~~~---~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i 163 (421)
T 2ih2_A 87 LADFLLWEPG---EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFV 163 (421)
T ss_dssp ESCGGGCCCS---SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCChhhcCcc---CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999876532 25788998754321 1111 3367788999999998865
No 247
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.22 E-value=2e-11 Score=119.32 Aligned_cols=113 Identities=21% Similarity=0.294 Sum_probs=80.4
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..++..+ .+|.+|||+|||+|.+++.+|. .|..+|++||+|+.++..++ ++++ ..|....+++++++|+.+
T Consensus 531 r~~l~~~--~~g~~VLDlg~GtG~~sl~aa~-~ga~~V~aVD~s~~al~~a~--~N~~----~ngl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 531 RRMLGQM--SKGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAE--RNLR----LNGLTGRAHRLIQADCLA 601 (703)
T ss_dssp HHHHHHH--CTTCEEEEESCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHH--HHHH----HTTCCSTTEEEEESCHHH
T ss_pred HHHHHHh--cCCCcEEEeeechhHHHHHHHH-CCCCEEEEEeCCHHHHHHHH--HHHH----HcCCCccceEEEecCHHH
Confidence 3444442 4788999999999999998876 57767999999998555544 4443 344433479999999987
Q ss_pred C-cccccccceEEEEEeccccC------------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 E-EHREKITQASIVFVNNFAFG------------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l-~~~~~~~d~dvv~~~~~~~~------------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ +... ..+|+|+++...+. .+....+.++.++|||||++++.
T Consensus 602 ~l~~~~--~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s 656 (703)
T 3v97_A 602 WLREAN--EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 656 (703)
T ss_dssp HHHHCC--CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhcC--CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 3322 35788998765443 12344577788999999999975
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.22 E-value=5.1e-12 Score=109.44 Aligned_cols=100 Identities=11% Similarity=-0.024 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
..+.+|||||||+|.+++.+++. + .+|+++|+++.++..|+ +++.... .+...++++++.+|+.+.. ..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar--~~~~~~~--~~~~~~rv~~~~~D~~~~~-----~~ 139 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFI--SFFPHFH--EVKNNKNFTHAKQLLDLDI-----KK 139 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGT--TTSTTHH--HHHTCTTEEEESSGGGSCC-----CC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHH--HHHHhhc--cccCCCeEEEEechHHHHH-----hh
Confidence 45679999999999999998887 7 67999999998666654 2221100 0112358999999998754 24
Q ss_pred eEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|+++. .++...++++.+.|||||++++.
T Consensus 140 fD~Ii~d~----~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 140 YDLIFCLQ----EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEEEESS----CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEECC----CChHHHHHHHHHhcCCCcEEEEE
Confidence 68888863 34456899999999999999974
No 249
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.20 E-value=9.5e-11 Score=101.85 Aligned_cols=106 Identities=21% Similarity=0.200 Sum_probs=77.0
Q ss_pred cccCCCCCCCCccc---CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHH
Q psy17227 25 LNVYQPFSPFVYGE---TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVF 101 (268)
Q Consensus 25 ~~~y~~~~~~~~g~---~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~ 101 (268)
++.|.......+|. .....+.++++.+++.++ +|||||||+|.++..++.. +.. |+|||+|+.++..++ +++
T Consensus 14 ~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~-V~avEid~~~~~~l~--~~~ 88 (271)
T 3fut_A 14 LERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAE-VTAIEKDLRLRPVLE--ETL 88 (271)
T ss_dssp HHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCC-EEEEESCGGGHHHHH--HHT
T ss_pred HHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCE-EEEEECCHHHHHHHH--Hhc
Confidence 34444444445554 345677889999999999 9999999999999999886 444 999999998655543 221
Q ss_pred HHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccC
Q psy17227 102 KRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFG 145 (268)
Q Consensus 102 ~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~ 145 (268)
...+++++++|+.++++++. ..+|.|++|..++.
T Consensus 89 ---------~~~~v~vi~~D~l~~~~~~~-~~~~~iv~NlPy~i 122 (271)
T 3fut_A 89 ---------SGLPVRLVFQDALLYPWEEV-PQGSLLVANLPYHI 122 (271)
T ss_dssp ---------TTSSEEEEESCGGGSCGGGS-CTTEEEEEEECSSC
T ss_pred ---------CCCCEEEEECChhhCChhhc-cCccEEEecCcccc
Confidence 12589999999999887542 24567888766544
No 250
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.17 E-value=1.1e-10 Score=100.33 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=69.0
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
....+.++++.+++.++++|||||||+|.++..++.. +..+|+|||+|+.++..++ + . ...++++++
T Consensus 16 d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~------~----~--~~~~v~~i~ 82 (249)
T 3ftd_A 16 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLK------S----I--GDERLEVIN 82 (249)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHT------T----S--CCTTEEEEC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHH------h----c--cCCCeEEEE
Confidence 3567788999999999999999999999999998875 5556999999997444433 1 1 135899999
Q ss_pred cCCCCCcccccccceEEEEEecccc
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAF 144 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~ 144 (268)
+|+.++++++...++ +|+.|..++
T Consensus 83 ~D~~~~~~~~~~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 83 EDASKFPFCSLGKEL-KVVGNLPYN 106 (249)
T ss_dssp SCTTTCCGGGSCSSE-EEEEECCTT
T ss_pred cchhhCChhHccCCc-EEEEECchh
Confidence 999999886543233 566665544
No 251
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.16 E-value=2.4e-10 Score=105.71 Aligned_cols=111 Identities=15% Similarity=0.244 Sum_probs=77.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||+|||+|.+++.+|.. + .+|+|+|+|+.++..|+ ++++ ..+. .+++|+++|+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~-~~V~gvD~s~~al~~A~--~n~~----~~~~--~~v~f~~~d~ 343 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-A-ASVVGVEGVPALVEKGQ--QNAR----LNGL--QNVTFYHENL 343 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-S-SEEEEEESCHHHHHHHH--HHHH----HTTC--CSEEEEECCT
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-C-CEEEEEeCCHHHHHHHH--HHHH----HcCC--CceEEEECCH
Confidence 3455777778888999999999999999998876 3 45999999998555544 4333 2333 3899999999
Q ss_pred CC----CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LT----EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~----l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ +++.+. .+|+|+++...... ...+.. ...++|++.++++
T Consensus 344 ~~~l~~~~~~~~--~fD~Vv~dPPr~g~--~~~~~~-l~~~~p~~ivyvs 388 (433)
T 1uwv_A 344 EEDVTKQPWAKN--GFDKVLLDPARAGA--AGVMQQ-IIKLEPIRIVYVS 388 (433)
T ss_dssp TSCCSSSGGGTT--CCSEEEECCCTTCC--HHHHHH-HHHHCCSEEEEEE
T ss_pred HHHhhhhhhhcC--CCCEEEECCCCccH--HHHHHH-HHhcCCCeEEEEE
Confidence 87 334333 45778887543221 233333 3457899988775
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.15 E-value=2.4e-10 Score=104.15 Aligned_cols=120 Identities=14% Similarity=0.057 Sum_probs=84.4
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC--------------------------------------c
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC--------------------------------------K 80 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~--------------------------------------~ 80 (268)
+.+.....++...++.++.+|||+|||+|.+++.+|..... .
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 34455667888889999999999999999999998875321 2
Q ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccC-----cCHHHHHHHH
Q psy17227 81 ICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFG-----PTVDHALKER 155 (268)
Q Consensus 81 ~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~-----~~~~~~l~e~ 155 (268)
.|+|+|+|+.++.+|+ +++. ..|.. .+++|.++|+.+++.+. .+|+|++|..+.. .+....++++
T Consensus 259 ~V~GvDid~~ai~~Ar--~Na~----~~gl~-~~i~~~~~D~~~l~~~~---~~D~Iv~NPPyg~rl~~~~~l~~ly~~l 328 (385)
T 3ldu_A 259 KIYGYDIDEESIDIAR--ENAE----IAGVD-EYIEFNVGDATQFKSED---EFGFIITNPPYGERLEDKDSVKQLYKEL 328 (385)
T ss_dssp CEEEEESCHHHHHHHH--HHHH----HHTCG-GGEEEEECCGGGCCCSC---BSCEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHH--HHHH----HcCCC-CceEEEECChhhcCcCC---CCcEEEECCCCcCccCCHHHHHHHHHHH
Confidence 4999999998766665 3333 23432 47999999999887542 4678988866431 2334445555
Q ss_pred HhcCCC--CcEEEEe
Q psy17227 156 FQDLKD--GARIVSS 168 (268)
Q Consensus 156 ~r~Lkp--GG~~i~~ 168 (268)
.+.||+ |+.+++.
T Consensus 329 g~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 329 GYAFRKLKNWSYYLI 343 (385)
T ss_dssp HHHHHTSBSCEEEEE
T ss_pred HHHHhhCCCCEEEEE
Confidence 566666 7776653
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=2.9e-10 Score=103.86 Aligned_cols=121 Identities=12% Similarity=-0.005 Sum_probs=84.4
Q ss_pred cCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC--------------------------------------
Q psy17227 38 ETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC-------------------------------------- 79 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~-------------------------------------- 79 (268)
++.+.....++...++.++..|||++||+|.+++.+|.....
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 345556677888899999999999999999999998875432
Q ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccC-----cCHHHHHHH
Q psy17227 80 KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFG-----PTVDHALKE 154 (268)
Q Consensus 80 ~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~-----~~~~~~l~e 154 (268)
..|+|+|+|+.++..|+ +++. ..|.. .+++|+++|+.+++.++ .+|+|++|..+.. .+....+.+
T Consensus 264 ~~V~GvDid~~al~~Ar--~Na~----~~gl~-~~I~~~~~D~~~~~~~~---~fD~Iv~NPPYg~rl~~~~~l~~ly~~ 333 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAK--QNAV----EAGLG-DLITFRQLQVADFQTED---EYGVVVANPPYGERLEDEEAVRQLYRE 333 (393)
T ss_dssp CCEEEEESCHHHHHHHH--HHHH----HTTCT-TCSEEEECCGGGCCCCC---CSCEEEECCCCCCSHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHH--HHHH----HcCCC-CceEEEECChHhCCCCC---CCCEEEECCCCccccCCchhHHHHHHH
Confidence 24999999998666655 3333 34442 46999999999987543 4678888866432 223334444
Q ss_pred HHhcCCC--CcEEEEe
Q psy17227 155 RFQDLKD--GARIVSS 168 (268)
Q Consensus 155 ~~r~Lkp--GG~~i~~ 168 (268)
+.+.||+ ||.+++.
T Consensus 334 lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 334 MGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HHHHHHTCTTCEEEEE
T ss_pred HHHHHhcCCCCEEEEE
Confidence 4455554 8877654
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.14 E-value=1.2e-11 Score=118.25 Aligned_cols=102 Identities=15% Similarity=0.073 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--ccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HREKI 131 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~~~~ 131 (268)
.++.+|||||||.|.++..+|+. |+. |+|||+|+.++.+|+ .++. +.| ..+++|.++|++++. +.+..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-ga~-V~giD~~~~~i~~a~--~~a~----~~~--~~~~~~~~~~~~~~~~~~~~~~ 134 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-GAT-IVGIDFQQENINVCR--ALAE----ENP--DFAAEFRVGRIEEVIAALEEGE 134 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-TCE-EEEEESCHHHHHHHH--HHHH----TST--TSEEEEEECCHHHHHHHCCTTS
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-CCE-EEEECCCHHHHHHHH--HHHH----hcC--CCceEEEECCHHHHhhhccCCC
Confidence 45679999999999999999874 776 999999998766665 3332 122 137999999999873 33444
Q ss_pred cceEEEEEe-ccccCcCHH--HHHHHHHhcCCCCcEEEE
Q psy17227 132 TQASIVFVN-NFAFGPTVD--HALKERFQDLKDGARIVS 167 (268)
Q Consensus 132 ~d~dvv~~~-~~~~~~~~~--~~l~e~~r~LkpGG~~i~ 167 (268)
| |+|++. .+.|.+++. ..+..+++.|+++|..++
T Consensus 135 f--D~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 135 F--DLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp C--SEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred c--cEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 4 556654 445666553 234566777888776543
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.14 E-value=2.8e-10 Score=105.00 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+.++.+|||+|||+|.+++.+|+. +. +|+|+|+|+.++..|+ ++++ ..+. . ++|+++|+.++...
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~-~V~gvD~s~~ai~~A~--~n~~----~ngl--~-v~~~~~d~~~~~~~---- 352 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GF-NVKGFDSNEFAIEMAR--RNVE----INNV--D-AEFEVASDREVSVK---- 352 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHH--HHHH----HHTC--C-EEEEECCTTTCCCT----
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CC-EEEEEECCHHHHHHHH--HHHH----HcCC--c-EEEEECChHHcCcc----
Confidence 578889999999999999998875 44 5999999998555544 3333 2232 3 99999999986522
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+|+++.... .....+.+..+.|+|||.++++
T Consensus 353 ~fD~Vv~dPPr~--g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 GFDTVIVDPPRA--GLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp TCSEEEECCCTT--CSCHHHHHHHHHHCCSEEEEEE
T ss_pred CCCEEEEcCCcc--chHHHHHHHHHhcCCCcEEEEE
Confidence 457788764421 1222333344569999999886
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=4.3e-10 Score=102.39 Aligned_cols=120 Identities=15% Similarity=0.035 Sum_probs=85.8
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC--------------------------------------c
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC--------------------------------------K 80 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~--------------------------------------~ 80 (268)
+.+.....++...++.++..|||.+||+|.+++.+|..... .
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 44555667888889999999999999999999998865322 2
Q ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccC-----cCHHHHHHHH
Q psy17227 81 ICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFG-----PTVDHALKER 155 (268)
Q Consensus 81 ~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~-----~~~~~~l~e~ 155 (268)
+++|+|+|+.++..|+ ++++ ..|.. ..++|+++|+.+++.++ .+|+|++|..+.. .+....+.++
T Consensus 258 ~v~GvDid~~al~~Ar--~Na~----~~gl~-~~I~~~~~D~~~l~~~~---~fD~Iv~NPPYG~rl~~~~~l~~ly~~l 327 (384)
T 3ldg_A 258 DISGFDFDGRMVEIAR--KNAR----EVGLE-DVVKLKQMRLQDFKTNK---INGVLISNPPYGERLLDDKAVDILYNEM 327 (384)
T ss_dssp CEEEEESCHHHHHHHH--HHHH----HTTCT-TTEEEEECCGGGCCCCC---CSCEEEECCCCTTTTSCHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHH--HHHH----HcCCC-CceEEEECChHHCCccC---CcCEEEECCchhhccCCHHHHHHHHHHH
Confidence 4999999998666655 3333 34442 46999999999987543 4678998866431 2344555666
Q ss_pred HhcCCC--CcEEEEe
Q psy17227 156 FQDLKD--GARIVSS 168 (268)
Q Consensus 156 ~r~Lkp--GG~~i~~ 168 (268)
.+.||+ ||.+++.
T Consensus 328 g~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 328 GETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHHTTCTTSEEEEE
T ss_pred HHHHhhCCCcEEEEE
Confidence 666666 8887654
No 257
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.11 E-value=2.3e-10 Score=99.80 Aligned_cols=91 Identities=20% Similarity=0.182 Sum_probs=67.8
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCC--cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGC--KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL 117 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~--~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 117 (268)
....+.++++.+++.++++|||||||+|.++..+++..+. .+|+|||+|+.++..++ ++. ..++++
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~--~~~----------~~~v~~ 94 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLE--QRF----------GELLEL 94 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHH--HHH----------GGGEEE
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHH--Hhc----------CCCcEE
Confidence 3567788999999999999999999999999999987543 23999999997555443 211 248999
Q ss_pred EEcCCCCCccccccc----ceEEEEEecc
Q psy17227 118 VKGDFLTEEHREKIT----QASIVFVNNF 142 (268)
Q Consensus 118 ~~gD~~~l~~~~~~~----d~dvv~~~~~ 142 (268)
+++|+.++++++-.. ....|+.|..
T Consensus 95 i~~D~~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 95 HAGDALTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp EESCGGGCCGGGGSCSSSSCCEEEEEECC
T ss_pred EECChhcCChhHhcccccCCceEEEEccC
Confidence 999999998765321 1235666643
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=2.2e-10 Score=98.65 Aligned_cols=90 Identities=13% Similarity=0.151 Sum_probs=67.3
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK 119 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 119 (268)
....+.++++.+++.++++|||||||+|.++..++.. + .+|+|||+|+.++..++ +++. ..+++++++
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~avEid~~~~~~~~--~~~~--------~~~~v~~i~ 81 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-C-DNLALVEIDRDLVAFLQ--KKYN--------QQKNITIYQ 81 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-S-SEEEEEECCHHHHHHHH--HHHT--------TCTTEEEEE
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-C-CEEEEEECCHHHHHHHH--HHHh--------hCCCcEEEE
Confidence 3567788999999999999999999999999998875 4 45999999997554443 2221 135899999
Q ss_pred cCCCCCcccccc--cceEEEEEecc
Q psy17227 120 GDFLTEEHREKI--TQASIVFVNNF 142 (268)
Q Consensus 120 gD~~~l~~~~~~--~d~dvv~~~~~ 142 (268)
+|+.++++++-. ..+| |++|..
T Consensus 82 ~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 82 NDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp SCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred cchHhCCHHHhccCCCeE-EEecCC
Confidence 999999875421 2355 555544
No 259
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.11 E-value=1.3e-10 Score=110.34 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=84.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC------------------CcEEEEEeCCCChhHHHHHHHHHH
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG------------------CKICWGVEKADLPAKYAEMHTVFK 102 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~------------------~~~v~GiD~s~~~~~~a~~~~~~~ 102 (268)
...+..+++.+...++.+|||.|||+|+++..+++... ...++|+|+++.+..+|+++-.+
T Consensus 155 ~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l- 233 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL- 233 (541)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH-
Confidence 44455677778888899999999999999998876531 12499999999988887754322
Q ss_pred HHHHHhcccc---ccEEEEEcCCCCCcccccccceEEEEEeccccCc--------------C-HHHHHHHHHhcCCCCcE
Q psy17227 103 RWMQWYGKRH---GEFRLVKGDFLTEEHREKITQASIVFVNNFAFGP--------------T-VDHALKERFQDLKDGAR 164 (268)
Q Consensus 103 ~~~~~~~~~~---~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~--------------~-~~~~l~e~~r~LkpGG~ 164 (268)
.|... .++.+.++|....+.. ....+|+|++|..+... + ....+..+++.|||||+
T Consensus 234 -----~gi~~~~~~~~~I~~gDtL~~~~~-~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 234 -----HDIEGNLDHGGAIRLGNTLGSDGE-NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp -----TTCCCBGGGTBSEEESCTTSHHHH-TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred -----hCCCccccccCCeEeCCCcccccc-cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 23221 1278999998775421 12357889988653221 1 12467888999999999
Q ss_pred EEEe
Q psy17227 165 IVSS 168 (268)
Q Consensus 165 ~i~~ 168 (268)
+++.
T Consensus 308 ~a~V 311 (541)
T 2ar0_A 308 AAVV 311 (541)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=1.2e-09 Score=96.68 Aligned_cols=88 Identities=14% Similarity=0.158 Sum_probs=63.9
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
++..+++.+|++|||+|||+|+.+..+|... +..+|+++|+++.++.. ++++++ ..|. .+++++++|+.++
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~--~~~n~~----r~g~--~~v~~~~~D~~~~ 165 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLAS--MATLLA----RAGV--SCCELAEEDFLAV 165 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHH--HHHHHH----HTTC--CSEEEEECCGGGS
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHH--HHHHHH----HcCC--CeEEEEeCChHhc
Confidence 4456788999999999999999999999875 34569999999874333 344444 2343 4799999999887
Q ss_pred ccccc-ccceEEEEEecc
Q psy17227 126 EHREK-ITQASIVFVNNF 142 (268)
Q Consensus 126 ~~~~~-~~d~dvv~~~~~ 142 (268)
+.... ...+|.|+++..
T Consensus 166 ~~~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 166 SPSDPRYHEVHYILLDPS 183 (309)
T ss_dssp CTTCGGGTTEEEEEECCC
T ss_pred CccccccCCCCEEEEcCC
Confidence 53221 134788887543
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.05 E-value=2.8e-10 Score=103.11 Aligned_cols=109 Identities=14% Similarity=0.061 Sum_probs=73.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+..+++.++.. +.+|||+|||+|.+++.+|+. ..+|+|+|+|+.++..|+ ++++ ..|. .+++|+++|+.
T Consensus 203 ~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~--~n~~----~ng~--~~v~~~~~d~~ 271 (369)
T 3bt7_A 203 LEWALDVTKGS-KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQ--YNIA----ANHI--DNVQIIRMAAE 271 (369)
T ss_dssp HHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHH--HHHH----HTTC--CSEEEECCCSH
T ss_pred HHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHH--HHHH----HcCC--CceEEEECCHH
Confidence 34566666654 578999999999999988763 446999999998555544 4433 2343 48999999998
Q ss_pred CCc--cccc------------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE--HREK------------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~--~~~~------------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++. +... ...+|+|+++.... ....++.+.|+|+|+++..
T Consensus 272 ~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 272 EFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSETEKMVQAYPRILYI 325 (369)
T ss_dssp HHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEEE
T ss_pred HHHHHHhhccccccccccccccCCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEEE
Confidence 753 1110 01478888764322 2335667777888888754
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.05 E-value=3.7e-10 Score=99.53 Aligned_cols=90 Identities=12% Similarity=0.209 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+..+++.+++.++.+|||+|||+|+.+..+++..+..+|+|+|+|+.++..++ +++. ..+ .+++++++|+
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~--~~~~----~~g---~~v~~v~~d~ 84 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE--EKLK----EFS---DRVSLFKVSY 84 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHTG----GGT---TTEEEEECCG
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH--HHHH----hcC---CcEEEEECCH
Confidence 356778888899999999999999999999998875446999999998555543 3322 222 4899999999
Q ss_pred CCCcc--cc-cccceEEEEEec
Q psy17227 123 LTEEH--RE-KITQASIVFVNN 141 (268)
Q Consensus 123 ~~l~~--~~-~~~d~dvv~~~~ 141 (268)
.+++. .+ ....+|.|+++.
T Consensus 85 ~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 85 READFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp GGHHHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEcC
Confidence 98762 21 112467888764
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.02 E-value=5e-10 Score=101.78 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHh---------------ccccccEEEEE
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWY---------------GKRHGEFRLVK 119 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~---------------~~~~~~i~~~~ 119 (268)
++.+|||+|||+|..++.+|+..+..+|+++|+++.++..++ ++++. . +. .++++++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~--~N~~~----n~~~~~~~~~~~~~~~gl--~~i~v~~ 118 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMK--RNVML----NFDGELRESKGRAILKGE--KTIVINH 118 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHH--HHHHH----HCCSCCEECSSEEEEESS--SEEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHH--HHHHH----hcccccccccccccccCC--CceEEEc
Confidence 688999999999999999999877666999999998555543 44442 2 32 2499999
Q ss_pred cCCCCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 120 GDFLTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 120 gD~~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+.++.... ...+|+|+++.+. .....+..+.+.|||||+++++
T Consensus 119 ~Da~~~~~~~-~~~fD~I~lDP~~---~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 119 DDANRLMAER-HRYFHFIDLDPFG---SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp SCHHHHHHHS-TTCEEEEEECCSS---CCHHHHHHHHHHEEEEEEEEEE
T ss_pred CcHHHHHHhc-cCCCCEEEeCCCC---CHHHHHHHHHHhcCCCCEEEEE
Confidence 9997754211 1246888876532 2356778888999999998865
No 264
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.02 E-value=4.3e-10 Score=96.71 Aligned_cols=93 Identities=17% Similarity=0.049 Sum_probs=65.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
+..+.++++.+++.++++|||||||+|.++. +++ .+..+|+|+|+++.++..++ +++. ..++++++++
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~--~~~~--------~~~~v~~i~~ 74 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQ--THPF--------LGPKLTIYQQ 74 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHH--TCTT--------TGGGEEEECS
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHH--HHhc--------cCCceEEEEC
Confidence 4567789999999999999999999999999 653 32222999999997544433 2111 1248999999
Q ss_pred CCCCCcccccc---cceEEEEEeccccC
Q psy17227 121 DFLTEEHREKI---TQASIVFVNNFAFG 145 (268)
Q Consensus 121 D~~~l~~~~~~---~d~dvv~~~~~~~~ 145 (268)
|+.++++++.. ...++|++|..++.
T Consensus 75 D~~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 75 DAMTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp CGGGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred chhhCCHHHhhcccCCceEEEECCCCCc
Confidence 99998865421 12356777765543
No 265
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.98 E-value=2.8e-09 Score=101.11 Aligned_cols=123 Identities=18% Similarity=0.103 Sum_probs=84.1
Q ss_pred CcHHHHHHHHHHcC----CCCCCEEEEEcCCCCHHHHHHHHHh---CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc
Q psy17227 39 TSFDLISRMIDQIN----ATPDDVFVDLGSGVGQVVLQVAAAT---GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR 111 (268)
Q Consensus 39 ~~~~~~~~ll~~l~----~~~~~~vLDiGCG~G~~~~~la~~~---~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~ 111 (268)
+....+..+++.+. ..++.+|||.+||+|+++..+++.. +...++|+|+++.+..+|+|+-. ..|..
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~------l~gi~ 274 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI------LHGVP 274 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH------HTTCC
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH------HcCCC
Confidence 33444455555554 4578899999999999999888764 23469999999988888775432 23443
Q ss_pred cccEEEEEcCCCCC--cccccccceEEEEEecccc--C-cC---------------------HHHHHHHHHhcCC-CCcE
Q psy17227 112 HGEFRLVKGDFLTE--EHREKITQASIVFVNNFAF--G-PT---------------------VDHALKERFQDLK-DGAR 164 (268)
Q Consensus 112 ~~~i~~~~gD~~~l--~~~~~~~d~dvv~~~~~~~--~-~~---------------------~~~~l~e~~r~Lk-pGG~ 164 (268)
..++.+.++|.... |.. ....+|+|++|..+. + .+ -...+..+.+.|| |||+
T Consensus 275 ~~~~~I~~gDtL~~d~p~~-~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr 353 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQ-EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGV 353 (542)
T ss_dssp GGGEEEEESCTTTSCSCCS-SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCE
T ss_pred cCccceEecceeccccccc-ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCcee
Confidence 35789999999875 421 123567888885431 1 00 0125788889999 9999
Q ss_pred EEEe
Q psy17227 165 IVSS 168 (268)
Q Consensus 165 ~i~~ 168 (268)
+++.
T Consensus 354 ~a~V 357 (542)
T 3lkd_A 354 MAIV 357 (542)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.98 E-value=9.5e-10 Score=93.33 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.+..+|||||||+|-++..++ +...++|+|+|+.++.+++ +++. .. ..+.++..+|....+++. .
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar--~~~~----~~---g~~~~~~v~D~~~~~~~~---~ 168 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVIT--PFAR----EK---DWDFTFALQDVLCAPPAE---A 168 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHH--HHHH----HT---TCEEEEEECCTTTSCCCC---B
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHH--HHHH----hc---CCCceEEEeecccCCCCC---C
Confidence 567799999999999998765 6667999999998666654 3222 12 257899999999877654 4
Q ss_pred eEEEEEecccc-CcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAF-GPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~-~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+++++-++| .++ ......++++.|++++.+|..
T Consensus 169 ~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 169 GDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp CSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred cchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 57787765533 222 222345888999999999986
No 267
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.98 E-value=2e-10 Score=99.04 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=70.6
Q ss_pred HHHHHcCCCCC--CEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHH-HHHHHHHHHHHhc-cccccEEEEEcC
Q psy17227 46 RMIDQINATPD--DVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAE-MHTVFKRWMQWYG-KRHGEFRLVKGD 121 (268)
Q Consensus 46 ~ll~~l~~~~~--~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~-~~~~~~~~~~~~~-~~~~~i~~~~gD 121 (268)
.+++.++++++ .+|||+|||+|..++.+|.. |+. |+|||+++.+..+++ +.+.+++.....+ . ..+++++++|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l-~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCR-VRMLERNPVVAALLDDGLARGYADAEIGGWL-QERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCC-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHH-HHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCE-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhh-hcCEEEEECC
Confidence 36677788888 89999999999999999886 665 999999997555544 2222221000111 1 1479999999
Q ss_pred CCCC-cccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCc
Q psy17227 122 FLTE-EHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGA 163 (268)
Q Consensus 122 ~~~l-~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG 163 (268)
..++ +.... .+|+|+++..+........+++..++|++.+
T Consensus 154 ~~~~L~~~~~--~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 154 SLTALTDITP--RPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHHSTTCSS--CCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred HHHHHHhCcc--cCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 8763 31112 3678998876544433344555556665533
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.98 E-value=1.6e-10 Score=99.72 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=58.3
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHH-HHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYA-EMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a-~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+...++..++.+|||+|||+|..++.+|.. ++. |+|+|+|+.+..+. .+.+.+++.....+. ..+++++++|+.++
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~-V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLT-VTAFEQHPAVACLLSDGIRRALLNPETQDT-AARINLHFGNAAEQ 151 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCC-EEEEECCHHHHHHHHHHHHHHHHSHHHHHH-HTTEEEEESCHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCE-EEEEECChhhhHHHHHHHHHHHhHHHhhCC-ccCeEEEECCHHHH
Confidence 344446667889999999999999998885 665 99999999321111 122222221122222 13599999999874
Q ss_pred -c-ccccccceEEEEEeccc
Q psy17227 126 -E-HREKITQASIVFVNNFA 143 (268)
Q Consensus 126 -~-~~~~~~d~dvv~~~~~~ 143 (268)
+ +++....+|+|+++..+
T Consensus 152 l~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC
T ss_pred HHhhhccCCCccEEEECCCC
Confidence 3 33200235678877543
No 269
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.97 E-value=5.5e-10 Score=95.77 Aligned_cols=103 Identities=11% Similarity=0.064 Sum_probs=75.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.+..+|||||||+|-++..++...+..+++|+|+++.++.+++ +++. ..| .+.++.+.|...-+.+. .
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~--~~l~----~~g---~~~~~~v~D~~~~~p~~---~ 198 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD--EALT----RLN---VPHRTNVADLLEDRLDE---P 198 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH--HHHH----HTT---CCEEEEECCTTTSCCCS---C
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH--HHHH----hcC---CCceEEEeeecccCCCC---C
Confidence 4467999999999999998888777778999999998666554 3332 233 35899999998755432 4
Q ss_pred eEEEEEecccc-CcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAF-GPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~-~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+++++-+++ .++ ......++++.|+|||.||+.
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred cchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 67888776643 222 222444999999999999986
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.95 E-value=6.7e-09 Score=101.43 Aligned_cols=124 Identities=13% Similarity=0.057 Sum_probs=86.1
Q ss_pred cCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHh----------------------------------------
Q psy17227 38 ETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAAT---------------------------------------- 77 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~---------------------------------------- 77 (268)
++.+.....++...++.++.+|||.+||+|.+++.+|...
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3555666778888899999999999999999999988642
Q ss_pred --CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccC-----cCHH-
Q psy17227 78 --GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFG-----PTVD- 149 (268)
Q Consensus 78 --~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~-----~~~~- 149 (268)
....++|+|+++.++.+|+ .++. ..|.. ..++|.++|+.++..+.....+|+|++|..+-. .+..
T Consensus 253 ~~~~~~i~G~Did~~av~~A~--~N~~----~agv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ 325 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRAR--TNAR----LAGIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 325 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHH--HHHH----HTTCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHH--HHHH----HcCCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHH
Confidence 1124999999998777765 3333 34543 469999999988742221114678888866421 1222
Q ss_pred --HHHHHHHhcCCCCcEEEEe
Q psy17227 150 --HALKERFQDLKDGARIVSS 168 (268)
Q Consensus 150 --~~l~e~~r~LkpGG~~i~~ 168 (268)
..+.++++.+.|||++++.
T Consensus 326 ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 326 LHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHhhCCCCeEEEE
Confidence 3345566777899998764
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.94 E-value=4.9e-09 Score=100.61 Aligned_cols=101 Identities=22% Similarity=0.191 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCCCHH---HHHHHHHhCCc-EEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGVGQV---VLQVAAATGCK-ICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~---~~~la~~~~~~-~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.+..|||||||+|-+ ++.++++.+.+ +|++||.|+ ++..++ +. .+..+. .++|++++||++++..++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~--~~----v~~N~~-~dkVtVI~gd~eev~LPE- 427 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTL--EN----WQFEEW-GSQVTVVSSDMREWVAPE- 427 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHH--HH----HHHHTT-GGGEEEEESCTTTCCCSS-
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHH--HH----HHhccC-CCeEEEEeCcceeccCCc-
Confidence 345799999999988 66555554443 589999998 333433 22 123344 358999999999987664
Q ss_pred ccceEEEEEecc---ccCcCHHHHHHHHHhcCCCCcEEE
Q psy17227 131 ITQASIVFVNNF---AFGPTVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 131 ~~d~dvv~~~~~---~~~~~~~~~l~e~~r~LkpGG~~i 166 (268)
.+|+|+++-. +..+.....+...-|.|||||.++
T Consensus 428 --KVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 428 --KADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp --CEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred --ccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 5899987633 334445555555558999999986
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.91 E-value=1.4e-09 Score=99.05 Aligned_cols=104 Identities=11% Similarity=-0.015 Sum_probs=75.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccccc-EEEEEcCCCCCcc-ccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGE-FRLVKGDFLTEEH-REK 130 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-i~~~~gD~~~l~~-~~~ 130 (268)
++|.+|||++||+|.+++.+|.+. |+.+|+++|+++.++..++ ++++ ..+.. .+ ++++++|+.++-- ..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~--~N~~----~Ngl~-~~~v~v~~~Da~~~l~~~~- 122 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK--ENFK----LNNIP-EDRYEIHGMEANFFLRKEW- 122 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH--HHHH----HTTCC-GGGEEEECSCHHHHHHSCC-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HHHH----HhCCC-CceEEEEeCCHHHHHHHhh-
Confidence 568899999999999999998874 5567999999997555443 4443 34442 24 9999999876421 11
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+|+|+++.+ ......+..+.+.|||||+++++
T Consensus 123 ~~~fD~V~lDP~---g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 123 GFGFDYVDLDPF---GTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp SSCEEEEEECCS---SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcEEEECCC---cCHHHHHHHHHHHhCCCCEEEEE
Confidence 124789998863 12345777888999999998875
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.91 E-value=6.9e-10 Score=105.33 Aligned_cols=121 Identities=14% Similarity=0.090 Sum_probs=82.5
Q ss_pred CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC---------------CcEEEEEeCCCChhHHHHHHHHHHH
Q psy17227 39 TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG---------------CKICWGVEKADLPAKYAEMHTVFKR 103 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~---------------~~~v~GiD~s~~~~~~a~~~~~~~~ 103 (268)
+....+..+++.+...++ +|||.+||+|++++.+++... ...++|+|+++.+..+|+|+-.+
T Consensus 229 TP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-- 305 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-- 305 (544)
T ss_dssp CCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH--
T ss_pred CCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH--
Confidence 445556667777777776 999999999999988765321 23599999999888887754322
Q ss_pred HHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccccCcC------------------------------HHHHHH
Q psy17227 104 WMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFAFGPT------------------------------VDHALK 153 (268)
Q Consensus 104 ~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~~~------------------------------~~~~l~ 153 (268)
.|.. .++.+.++|....+... ...+|+|++|..+...+ -...+.
T Consensus 306 ----~gi~-~~i~i~~gDtL~~~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~ 379 (544)
T 3khk_A 306 ----RGID-FNFGKKNADSFLDDQHP-DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWML 379 (544)
T ss_dssp ----TTCC-CBCCSSSCCTTTSCSCT-TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHH
T ss_pred ----hCCC-cccceeccchhcCcccc-cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHH
Confidence 3432 34555899987654211 13578899886532110 114578
Q ss_pred HHHhcCCCCcEEEEe
Q psy17227 154 ERFQDLKDGARIVSS 168 (268)
Q Consensus 154 e~~r~LkpGG~~i~~ 168 (268)
.+.+.|||||++++.
T Consensus 380 ~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 380 HMLYHLAPTGSMALL 394 (544)
T ss_dssp HHHHTEEEEEEEEEE
T ss_pred HHHHHhccCceEEEE
Confidence 889999999998764
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.84 E-value=4.1e-09 Score=90.76 Aligned_cols=118 Identities=12% Similarity=-0.000 Sum_probs=75.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.+.++.++..++++.+|||||||+|+.+..++...+...++|+|++.++.....+. .. ...++..+++++
T Consensus 62 KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~---------~~-~g~~ii~~~~~~ 131 (277)
T 3evf_A 62 KLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV---------QS-LGWNIITFKDKT 131 (277)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC---------CB-TTGGGEEEECSC
T ss_pred HHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc---------Cc-CCCCeEEEeccc
Confidence 45567777778899999999999999999877766777788999885421000000 00 011455567766
Q ss_pred CCCcccccccceEEEEEecccc----CcCHHH---HHHHHHhcCCCC-cEEEEeCCCCC
Q psy17227 123 LTEEHREKITQASIVFVNNFAF----GPTVDH---ALKERFQDLKDG-ARIVSSKSFCP 173 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~----~~~~~~---~l~e~~r~LkpG-G~~i~~~~~~~ 173 (268)
...++... .+|+|+++...+ +.|... .+..+.++|||| |.|++ .-|+|
T Consensus 132 dv~~l~~~--~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~p 187 (277)
T 3evf_A 132 DIHRLEPV--KCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLAP 187 (277)
T ss_dssp CTTTSCCC--CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCT
T ss_pred eehhcCCC--CccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecCC
Confidence 54444443 467888875433 222222 246667899999 99998 45553
No 275
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.84 E-value=4.8e-09 Score=94.17 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccc---ccEEEEEcCCCCCccc--c
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRH---GEFRLVKGDFLTEEHR--E 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~i~~~~gD~~~l~~~--~ 129 (268)
++.+|||||||+|.+++.+++. +..+|++||+++.++.+++ +++..... ..... ++++++.+|+.+.--. .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~~~~Vt~VEID~~vie~Ar--~~~~~l~~-~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCK--KYMRKTCG-DVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHH--HHCCC-----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC-CCCEEEEEECCHHHHHHHH--HHHHHhcc-ccccccCCCcEEEEECcHHHHHHhhhc
Confidence 4679999999999999988775 4567999999998666654 33221000 00111 2799999999874321 0
Q ss_pred cccceEEEEEeccc--cCcCH-----HHHHHHH----HhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFA--FGPTV-----DHALKER----FQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~--~~~~~-----~~~l~e~----~r~LkpGG~~i~~ 168 (268)
....+|+|+++..- +.+.+ ...++.+ .++|+|||.+++.
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 12357899988653 11112 3445555 7999999999975
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.71 E-value=5.7e-08 Score=94.81 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=71.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhC---CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATG---CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE 129 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~---~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~ 129 (268)
..++.+|||.|||+|.+++.++...+ ...++|+|+++.++.+|+.+.++.......+ .....+..+|+.+....
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG--i~~~~I~~dD~L~~~~~- 395 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS--NNAPTITGEDVCSLNPE- 395 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT--TBCCEEECCCGGGCCGG-
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC--CCcceEEecchhccccc-
Confidence 35688999999999999999887764 2358999999987777732222110000011 12346667777653321
Q ss_pred cccceEEEEEeccccC--cC----------------------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFAFG--PT----------------------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~~--~~----------------------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
....+|+|++|..+.. .. ....+..+.+.|||||++++.
T Consensus 396 ~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfI 464 (878)
T 3s1s_A 396 DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAI 464 (878)
T ss_dssp GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEE
Confidence 1235789999876421 11 111245677899999998864
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.66 E-value=3.4e-08 Score=95.02 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCCHHHH---HHHHHhC----------CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 56 DDVFVDLGSGVGQVVL---QVAAATG----------CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~---~la~~~~----------~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
+..|||||||+|-++. .+++..+ ..+|++||.|+.+....+ ... ..+. .++|+++++|+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~-~~~------~Ng~-~d~VtVI~gd~ 481 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLK-YMN------VRTW-KRRVTIIESDM 481 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHH-HHH------HHTT-TTCSEEEESCG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHH-HHH------hcCC-CCeEEEEeCch
Confidence 4579999999999963 3333233 236999999985322211 111 1233 25799999999
Q ss_pred CCCccc---ccccceEEEEEecc-ccC--cCHHHHHHHHHhcCCCCcEEE
Q psy17227 123 LTEEHR---EKITQASIVFVNNF-AFG--PTVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 123 ~~l~~~---~~~~d~dvv~~~~~-~~~--~~~~~~l~e~~r~LkpGG~~i 166 (268)
+++.++ +....+|+|+++-. .+. +-....+..+-|.|||||.++
T Consensus 482 eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 482 RSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 998762 11246889988754 222 223345555568999999987
No 278
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.65 E-value=3.2e-07 Score=86.80 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=94.1
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCCCCccc--CcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-------
Q psy17227 8 RHIIQQTYNQSVTEPEKLNVYQPFSPFVYGE--TSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG------- 78 (268)
Q Consensus 8 ~~~~~~~y~~~~~~~~~~~~y~~~~~~~~g~--~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~------- 78 (268)
.|++.++|...+ +++..... ..|+ +....+.-+++.+...++.+|+|-.||+|+++..+.....
T Consensus 175 ~d~lG~~yE~ll------~~~~~~~g-~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~ 247 (530)
T 3ufb_A 175 MHTLSRLYETML------REMRDAAG-DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVE 247 (530)
T ss_dssp HHHHHHHHHHHH------HHHTTSSS-SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHH
T ss_pred hHHHHHHHHHHH------HHHHHhcC-cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchh
Confidence 367777777744 33322111 2232 4455566677888889999999999999999987665321
Q ss_pred ------CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc--ccceEEEEEeccccCc----
Q psy17227 79 ------CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK--ITQASIVFVNNFAFGP---- 146 (268)
Q Consensus 79 ------~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~--~~d~dvv~~~~~~~~~---- 146 (268)
...++|+|+++.+..+++|+-.+ +|. ....+.++|....|..+. ...+|+|++|..+-..
T Consensus 248 ~~~~~~~~~i~G~E~~~~~~~la~mNl~l------hg~--~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~ 319 (530)
T 3ufb_A 248 DREVLQESSIFGGEAKSLPYLLVQMNLLL------HGL--EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKG 319 (530)
T ss_dssp HHHHHHTCCEEEECCSHHHHHHHHHHHHH------HTC--SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHH
T ss_pred HHHHHhhhhhhhhhccHHHHHHHHHHHHh------cCC--ccccccccccccCchhhhcccccceEEEecCCCCcccccc
Confidence 12389999999988888865433 233 345678899887664332 1347889988654110
Q ss_pred ------------CH-HHHHHHHHhcCC-------CCcEEEEe
Q psy17227 147 ------------TV-DHALKERFQDLK-------DGARIVSS 168 (268)
Q Consensus 147 ------------~~-~~~l~e~~r~Lk-------pGG~~i~~ 168 (268)
+. ...+..+++.|| |||++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 320 ILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp HHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred ccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 11 112456667776 79998765
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.59 E-value=9.6e-08 Score=74.55 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCCCC-HHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 53 ATPDDVFVDLGSGVG-QVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G-~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
..++.+|||||||.| ..+..++...|+. |+++|+++. .+.++++|+++... +..
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~g~~-V~atDInp~-----------------------Av~~v~dDiF~P~~-~~Y 87 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHSKVD-LVLTDIKPS-----------------------HGGIVRDDITSPRM-EIY 87 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHSCCE-EEEECSSCS-----------------------STTEECCCSSSCCH-HHH
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhCCCe-EEEEECCcc-----------------------ccceEEccCCCCcc-ccc
Confidence 456679999999999 6999998878888 999999985 11199999998443 222
Q ss_pred cceEEEE-EeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVF-VNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~-~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++|+|. ++ -.+++...+.++.+.. |.-+++.
T Consensus 88 ~~~DLIYsir---PP~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 88 RGAALIYSIR---PPAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp TTEEEEEEES---CCTTTHHHHHHHHHHH--TCEEEEE
T ss_pred CCcCEEEEcC---CCHHHHHHHHHHHHHc--CCCEEEE
Confidence 3677874 44 3477888888887654 4667765
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.58 E-value=5.2e-08 Score=89.11 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=55.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHh--ccccccEEEEEcCCCCC-cc-c
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWY--GKRHGEFRLVKGDFLTE-EH-R 128 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~--~~~~~~i~~~~gD~~~l-~~-~ 128 (268)
+.+|.+|||+|||+|..++.+|+. +. +|+|||+|+.++.+++ ++++ .. |. .+++++++|+.+. +. .
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~-g~-~V~~VD~s~~~l~~Ar--~N~~----~~~~gl--~~i~~i~~Da~~~L~~~~ 160 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK-AS-QGIYIERNDETAVAAR--HNIP----LLLNEG--KDVNILTGDFKEYLPLIK 160 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT-CS-EEEEEESCHHHHHHHH--HHHH----HHSCTT--CEEEEEESCGGGSHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc-CC-EEEEEECCHHHHHHHH--HhHH----HhccCC--CcEEEEECcHHHhhhhcc
Confidence 345899999999999999988764 44 5999999998655554 4443 23 33 4899999999874 42 1
Q ss_pred ccccceEEEEEecc
Q psy17227 129 EKITQASIVFVNNF 142 (268)
Q Consensus 129 ~~~~d~dvv~~~~~ 142 (268)
+. .+|+|+++..
T Consensus 161 ~~--~fDvV~lDPP 172 (410)
T 3ll7_A 161 TF--HPDYIYVDPA 172 (410)
T ss_dssp HH--CCSEEEECCE
T ss_pred CC--CceEEEECCC
Confidence 22 4578888643
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.57 E-value=4e-08 Score=84.71 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=71.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc--
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG-- 120 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g-- 120 (268)
.+.++.++..++++++|||||||+|+.+..++...+...|+|+|++..+...+.. ++ .. ..++.....
T Consensus 78 KL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-------~~--~~-g~~ii~~~~~~ 147 (282)
T 3gcz_A 78 KLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-------RT--TL-GWNLIRFKDKT 147 (282)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-------CC--BT-TGGGEEEECSC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-------cc--cC-CCceEEeeCCc
Confidence 3456777778899999999999999999988877787789999998652111100 00 00 113333333
Q ss_pred CCCCCcccccccceEEEEEeccccCc----CHHH---HHHHHHhcCCCC--cEEEEeCCCC
Q psy17227 121 DFLTEEHREKITQASIVFVNNFAFGP----TVDH---ALKERFQDLKDG--ARIVSSKSFC 172 (268)
Q Consensus 121 D~~~l~~~~~~~d~dvv~~~~~~~~~----~~~~---~l~e~~r~LkpG--G~~i~~~~~~ 172 (268)
|+..++ . ..+|+|++....... |... .+.-+.++|||| |.|++- -|+
T Consensus 148 dv~~l~--~--~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K-vF~ 203 (282)
T 3gcz_A 148 DVFNME--V--IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK-VLC 203 (282)
T ss_dssp CGGGSC--C--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-ESC
T ss_pred chhhcC--C--CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE-Eec
Confidence 433332 2 357889887653321 2111 233445799999 999983 444
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.54 E-value=3.9e-07 Score=75.49 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=71.3
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc-cccEEEEEcCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR-HGEFRLVKGDFL 123 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~i~~~~gD~~ 123 (268)
.+++.. .+.+.++||++||| .-++.+|+.. ..+|+.||.++..... ++++++ ..|.. ..+++++.||+.
T Consensus 21 ~~~L~~-~l~~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~--ar~~l~----~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 21 AEALRM-AYEEAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARM--MKAWLA----ANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HHHHHH-HHHHCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHH--HHHHHH----HSCCCTTCEEEEEECCCS
T ss_pred HHHHHH-HhhCCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHH--HHHHHH----HcCCCCCCceEEEEeCch
Confidence 344433 34567899999995 6777777633 3459999999863333 344444 34431 258999999976
Q ss_pred CC---------------c-cc------ccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TE---------------E-HR------EKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l---------------~-~~------~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. + +. +....+|+||+.+- .....+..+.+.|+|||++++-
T Consensus 91 ~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 91 PTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp SBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS----SHHHHHHHHHHHCSSCEEEEET
T ss_pred hhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC----CchhHHHHHHHhcCCCeEEEEe
Confidence 42 2 11 11134788999753 3356677788999999999873
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.52 E-value=2.1e-07 Score=80.13 Aligned_cols=115 Identities=18% Similarity=0.140 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHh-------C-----CcEEEEEeCCCCh-hHHHHHH-------HHHHHHHHHh-----
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAAT-------G-----CKICWGVEKADLP-AKYAEMH-------TVFKRWMQWY----- 108 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~-------~-----~~~v~GiD~s~~~-~~~a~~~-------~~~~~~~~~~----- 108 (268)
+++.+|||||||+|..+..+++.. + ...++++|..|.. ..++++. ..+++.....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 456799999999999988766543 3 1368999998821 1222111 1122211110
Q ss_pred -----cc--ccccEEEEEcCCCC-Cccccc--ccceEEEEEeccc--cCcC--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 109 -----GK--RHGEFRLVKGDFLT-EEHREK--ITQASIVFVNNFA--FGPT--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 109 -----~~--~~~~i~~~~gD~~~-l~~~~~--~~d~dvv~~~~~~--~~~~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.. ...+++++.||+.+ +|..+. ...+|+|+...+. ..|+ -...|..+++.|||||++++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ty 212 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 212 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEES
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEE
Confidence 01 12478899999987 453211 1257899988653 2333 356789999999999999974
No 284
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.52 E-value=6.6e-07 Score=80.92 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCC-----CCEEEEEcCCCCHHHHHHH--------HHh-------CCcEEEEEeCCCChhHHHHHHHHHH
Q psy17227 43 LISRMIDQINATP-----DDVFVDLGSGVGQVVLQVA--------AAT-------GCKICWGVEKADLPAKYAEMHTVFK 102 (268)
Q Consensus 43 ~~~~ll~~l~~~~-----~~~vLDiGCG~G~~~~~la--------~~~-------~~~~v~GiD~s~~~~~~a~~~~~~~ 102 (268)
.+.+.++.+.+.+ ..+|+|+|||+|..++.++ +.. +.-.|..-|+... +....-+.+.
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N--DFn~lF~~L~ 112 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN--DFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS--CHHHHHHHSC
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc--chHHHHhhhh
Confidence 3444566665554 5789999999999998762 222 3335788888765 3221101100
Q ss_pred HHHH-------Hhccccc--cEEEEEcCCCCCcccccccceEEEEEeccccC-c--------------------------
Q psy17227 103 RWMQ-------WYGKRHG--EFRLVKGDFLTEEHREKITQASIVFVNNFAFG-P-------------------------- 146 (268)
Q Consensus 103 ~~~~-------~~~~~~~--~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~~~-~-------------------------- 146 (268)
...+ ..+...+ =+.-+-|.+..-.|++++ +|+|+++..+|| .
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S--~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~ 190 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPART--IDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGE 190 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTC--EEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcc--eEEEEecceeeeeccCchhhhccccccccCCceEeCCCCH
Confidence 0000 0000001 133445555555565654 567877777665 2
Q ss_pred ------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 147 ------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 147 ------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+...|+..++.|||||+++++
T Consensus 191 ~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 191 KTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 2334577888999999999986
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.49 E-value=5.1e-07 Score=81.11 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT 132 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~ 132 (268)
+++|++||||||++|+.+-.++++ |.. |+|||+.+- ...+. ..++|+++++|+..+..+. .
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~-V~aVD~~~l-------~~~l~--------~~~~V~~~~~d~~~~~~~~--~ 269 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMW-VYSVDNGPM-------AQSLM--------DTGQVTWLREDGFKFRPTR--S 269 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCE-EEEECSSCC-------CHHHH--------TTTCEEEECSCTTTCCCCS--S
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCE-EEEEEhhhc-------Chhhc--------cCCCeEEEeCccccccCCC--C
Confidence 678999999999999999988775 554 999999872 11111 2468999999998876543 3
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
.+|+|++.+...+......+......+..++.++.
T Consensus 270 ~~D~vvsDm~~~p~~~~~l~~~wl~~~~~~~aI~~ 304 (375)
T 4auk_A 270 NISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFN 304 (375)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred CcCEEEEcCCCChHHhHHHHHHHHhccccceEEEE
Confidence 57899998764333333333343334444444433
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.46 E-value=5.2e-07 Score=81.17 Aligned_cols=121 Identities=17% Similarity=0.175 Sum_probs=81.5
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc----cccEEEEEcCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR----HGEFRLVKGDF 122 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~----~~~i~~~~gD~ 122 (268)
....|+.+||++|||+.||.|+=+.++|...+...++++|+|+. ++..+++++++ .+.. ..++.+.+.|.
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~--R~~~l~~~l~r----~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPS--RIARLQKILHS----YVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHH--HHHHHHHHHHH----HSCTTTTTSSSEEEECCCG
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHH--HHHHHHHHHHH----hhhhhhccCCceEEEeCch
Confidence 44457899999999999999999999988655556999999985 55555555553 2221 24799999999
Q ss_pred CCCcccccccceEEEEEeccccC---------cC----------------HHHHHHHHHhcCCCCcEEE-EeCCCCCC
Q psy17227 123 LTEEHREKITQASIVFVNNFAFG---------PT----------------VDHALKERFQDLKDGARIV-SSKSFCPL 174 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~---------~~----------------~~~~l~e~~r~LkpGG~~i-~~~~~~~~ 174 (268)
.+++-.. ...+|.|++.+.|-. ++ ..+.|....+.|||||++| +|=++.|.
T Consensus 214 ~~~~~~~-~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 214 RKWGELE-GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp GGHHHHS-TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred hhcchhc-cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 8765211 124677887655422 11 0123456668899999988 44234443
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.46 E-value=4.5e-07 Score=78.46 Aligned_cols=83 Identities=14% Similarity=0.250 Sum_probs=62.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
+..+++.++++++..+||.+||.|+.+..+++. +. +|+|+|.++.++..++ + + ...+++++++|+.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g-~VigiD~Dp~Ai~~A~--~-L---------~~~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GG-RVIGLDQDPEAVARAK--G-L---------HLPGLTVVQGNFR 76 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TC-EEEEEESCHHHHHHHH--H-T---------CCTTEEEEESCGG
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CC-EEEEEeCCHHHHHHHH--h-h---------ccCCEEEEECCcc
Confidence 467888889999999999999999999999987 44 4999999997444433 2 2 1258999999999
Q ss_pred CCcc--cc-cccceEEEEEe
Q psy17227 124 TEEH--RE-KITQASIVFVN 140 (268)
Q Consensus 124 ~l~~--~~-~~~d~dvv~~~ 140 (268)
+++. .. +...+|.|+++
T Consensus 77 ~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 77 HLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GHHHHHHHTTCSCEEEEEEE
T ss_pred hHHHHHHHcCCCCcCEEEeC
Confidence 8762 11 12346777765
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.45 E-value=1.3e-06 Score=73.32 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=77.7
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc-C
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG-D 121 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g-D 121 (268)
.+.++.++..++++++||||||++|+.+.+++...+..+|+|+|+-..-...-.+ .+..| -..++|.++ |
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~-------~~s~g--wn~v~fk~gvD 136 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP-------MSTYG--WNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC-------CCCTT--TTSEEEECSCC
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch-------hhhcC--cCceEEEeccc
Confidence 4556777888999999999999999999988988888899999998730000000 00011 247999999 9
Q ss_pred CCCCcccccccceEEEEEeccccCcCHH----H---HHHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFGPTVD----H---ALKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~~~~~----~---~l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
+..++. ..+|+++|...--.+.+. . +|.-+.+.|++ |-|++ .-++|.
T Consensus 137 v~~~~~----~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~-KVl~py 190 (267)
T 3p8z_A 137 VFYLPP----EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI-KVLNPY 190 (267)
T ss_dssp GGGCCC----CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE-EESCCC
T ss_pred eeecCC----ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE-EEccCC
Confidence 766552 347888886543223321 2 33444578998 66665 446654
No 289
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.43 E-value=1.2e-06 Score=75.80 Aligned_cols=113 Identities=15% Similarity=0.193 Sum_probs=78.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCCh----hHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLP----AKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~----~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
.+..+.++..++++++||||||++|+.+.+++...|...|+|+|+-..- ..+. ......|.|+
T Consensus 82 KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~-------------ql~w~lV~~~ 148 (321)
T 3lkz_A 82 KLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQ-------------SYGWNIVTMK 148 (321)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCC-------------BTTGGGEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhh-------------hcCCcceEEE
Confidence 4556777888999999999999999999988888888899999998630 0000 0112359999
Q ss_pred Ec-CCCCCcccccccceEEEEEeccccCcCHH----H---HHHHHHhcCCCC-cEEEEeCCCCC
Q psy17227 119 KG-DFLTEEHREKITQASIVFVNNFAFGPTVD----H---ALKERFQDLKDG-ARIVSSKSFCP 173 (268)
Q Consensus 119 ~g-D~~~l~~~~~~~d~dvv~~~~~~~~~~~~----~---~l~e~~r~LkpG-G~~i~~~~~~~ 173 (268)
.+ |+..++. ..+|+++|...--.+.+. . +|.-+.+.|++| |-|++ .-++|
T Consensus 149 ~~~Dv~~l~~----~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl~p 207 (321)
T 3lkz_A 149 SGVDVFYRPS----ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVLCP 207 (321)
T ss_dssp CSCCTTSSCC----CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EESCT
T ss_pred eccCHhhCCC----CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEcCC
Confidence 99 9888764 246788876442223321 2 333445789998 77776 45665
No 290
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.38 E-value=1.4e-06 Score=76.13 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=78.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
....+||=||-|.|+.++.+++..+..+|+.|||++..+.+++ +.+..... .....++++++.+|..+.- ......
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~--~~lp~~~~-~~~~dpRv~v~~~Dg~~~l-~~~~~~ 157 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCR--QYLPNHNA-GSYDDPRFKLVIDDGVNFV-NQTSQT 157 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHH--HHCHHHHT-TGGGCTTEEEEESCTTTTT-SCSSCC
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHH--hcCccccc-cccCCCcEEEEechHHHHH-hhcccc
Confidence 3457899999999999999988767778999999998666654 33322110 1123568999999998743 122345
Q ss_pred eEEEEEeccc-cCc-C---HHHHHHHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFA-FGP-T---VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~-~~~-~---~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|++..+- ..+ . -...++.+.+.|+|||++++-
T Consensus 158 yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred CCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 7899987551 111 1 245678899999999999964
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.19 E-value=6.1e-06 Score=71.62 Aligned_cols=116 Identities=9% Similarity=-0.039 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc-C
Q psy17227 43 LISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG-D 121 (268)
Q Consensus 43 ~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g-D 121 (268)
.+.++.++--++++.+||||||++|+.+..+++..+...|+|+|+...+....... ......-+.+..+ |
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~---------~~~~~~iv~~~~~~d 139 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHM---------QTLGWNIVKFKDKSN 139 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---------CBTTGGGEEEECSCC
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccc---------cccCCceEEeecCce
Confidence 34556666335689999999999999999887766777799999985310000000 0000112334333 4
Q ss_pred CCCCcccccccceEEEEEeccccCcC----H---HHHHHHHHhcCCCC-cEEEEeCCCC
Q psy17227 122 FLTEEHREKITQASIVFVNNFAFGPT----V---DHALKERFQDLKDG-ARIVSSKSFC 172 (268)
Q Consensus 122 ~~~l~~~~~~~d~dvv~~~~~~~~~~----~---~~~l~e~~r~LkpG-G~~i~~~~~~ 172 (268)
+..++ . ..+|+|+++....... . ...+.-+.++|+|| |.|++- .|+
T Consensus 140 i~~l~--~--~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K-vF~ 193 (300)
T 3eld_A 140 VFTMP--T--EPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK-VLA 193 (300)
T ss_dssp TTTSC--C--CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE-ESS
T ss_pred eeecC--C--CCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE-ecc
Confidence 44433 2 2467888875533211 1 12233345799999 999974 344
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.16 E-value=9.3e-06 Score=70.61 Aligned_cols=119 Identities=12% Similarity=0.189 Sum_probs=76.0
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHh-----CCcEEEEEeCCCCh------------------------hH
Q psy17227 44 ISRMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAAT-----GCKICWGVEKADLP------------------------AK 93 (268)
Q Consensus 44 ~~~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~-----~~~~v~GiD~s~~~------------------------~~ 93 (268)
+..+++.+. ......||++||..|..++.+|... ...+++++|..+.+ ..
T Consensus 94 L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~ 173 (282)
T 2wk1_A 94 IRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVS 173 (282)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCC
T ss_pred HHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhH
Confidence 344555542 2334579999999999999887643 13459999975431 01
Q ss_pred HHHHHHHHHHHHHHhccccccEEEEEcCCCC-CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 94 YAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 94 ~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..+++++ ...|....+++++.||+.+ +|-. ....+|++++.+-.+ ......|..++..|+|||.+++-
T Consensus 174 ~~~ar~n~----~~~gl~~~~I~li~Gda~etL~~~-~~~~~d~vfIDaD~y-~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 174 EEEVRRNF----RNYDLLDEQVRFLPGWFKDTLPTA-PIDTLAVLRMDGDLY-ESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp HHHHHHHH----HHTTCCSTTEEEEESCHHHHSTTC-CCCCEEEEEECCCSH-HHHHHHHHHHGGGEEEEEEEEES
T ss_pred HHHHHHHH----HHcCCCcCceEEEEeCHHHHHhhC-CCCCEEEEEEcCCcc-ccHHHHHHHHHhhcCCCEEEEEc
Confidence 22233333 3455433689999999975 4421 113578888875311 22456788889999999999984
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.12 E-value=1.2e-05 Score=68.41 Aligned_cols=116 Identities=17% Similarity=0.202 Sum_probs=66.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc-CC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG-DF 122 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g-D~ 122 (268)
+.++-++.-++||++||||||+.|+-+..++...+...|.|.++..+. .+.-+. -....-.-+.|++| |+
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~--------~~~~Gv~~i~~~~G~Df 132 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPML--------MQSYGWNIVTMKSGVDV 132 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCC--------CCSTTGGGEEEECSCCG
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCc--------ccCCCceEEEeeccCCc
Confidence 345666656789999999999999999988776333223444443320 000000 00000012466668 99
Q ss_pred CCCcccccccceEEEEEeccccCc----CHHH---HHHHHHhcCCCCc-EEEEeCCCCC
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGP----TVDH---ALKERFQDLKDGA-RIVSSKSFCP 173 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~----~~~~---~l~e~~r~LkpGG-~~i~~~~~~~ 173 (268)
.+++ . ..+|+|+|...-... |... ++.-+.++||||| -|++ .-|++
T Consensus 133 ~~~~--~--~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv-KVFqg 186 (269)
T 2px2_A 133 FYKP--S--EISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI-KILCP 186 (269)
T ss_dssp GGSC--C--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCT
T ss_pred cCCC--C--CCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE-EECCC
Confidence 8754 1 246889887542222 2121 3433447999999 8877 45664
No 294
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.02 E-value=7.9e-06 Score=74.02 Aligned_cols=110 Identities=12% Similarity=0.034 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHH-----------------hCCcEEEEEeCCCC-hhHHHHHHHHHH-HHHHHhccccccEE
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA-----------------TGCKICWGVEKADL-PAKYAEMHTVFK-RWMQWYGKRHGEFR 116 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~-----------------~~~~~v~GiD~s~~-~~~~a~~~~~~~-~~~~~~~~~~~~i~ 116 (268)
..+|+|+|||+|..++.++.. .+.-.|+.-|+... --.+-+...... ...+..|.. .+--
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~-~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK-IGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC-TTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC-CCce
Confidence 578999999999999877765 12235788888643 111111111111 111122221 1234
Q ss_pred EEEc---CCCCCcccccccceEEEEEeccccC-cCH----HH--------------------H---------------HH
Q psy17227 117 LVKG---DFLTEEHREKITQASIVFVNNFAFG-PTV----DH--------------------A---------------LK 153 (268)
Q Consensus 117 ~~~g---D~~~l~~~~~~~d~dvv~~~~~~~~-~~~----~~--------------------~---------------l~ 153 (268)
|+.| .+..-.|++++ +|+|+++..+|| .+. .. + |+
T Consensus 132 f~~gvpgSFy~rlfp~~S--~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEES--MHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp EEEECCSCTTSCCSCTTC--EEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhhhccCCCCc--eEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5554 44445566654 577888877666 221 10 1 44
Q ss_pred HHHhcCCCCcEEEEe
Q psy17227 154 ERFQDLKDGARIVSS 168 (268)
Q Consensus 154 e~~r~LkpGG~~i~~ 168 (268)
..++.|||||+++++
T Consensus 210 ~Ra~eL~pGG~mvl~ 224 (384)
T 2efj_A 210 IHSEELISRGRMLLT 224 (384)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHhccCCeEEEE
Confidence 557999999999986
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.98 E-value=1.1e-05 Score=70.52 Aligned_cols=54 Identities=26% Similarity=0.372 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHH
Q psy17227 40 SFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAE 96 (268)
Q Consensus 40 ~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~ 96 (268)
....+.+++..+. .+|++|||++||+|.+++.++. .|.. ++|+|+++.++.+++
T Consensus 221 p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~-~g~~-~~g~e~~~~~~~~a~ 274 (297)
T 2zig_A 221 PLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAAR-WGRR-ALGVELVPRYAQLAK 274 (297)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHH-TTCE-EEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-cCCe-EEEEeCCHHHHHHHH
Confidence 3456677777766 7899999999999999987554 5765 999999998666654
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.85 E-value=3.1e-05 Score=68.57 Aligned_cols=86 Identities=14% Similarity=0.265 Sum_probs=63.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhC-CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 44 ISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATG-CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 44 ~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
+.++++.|.++||..++|..||.|+.+..+++..+ ..+|+|+|.++.++..++ + +...+++++++++
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~------r------L~~~Rv~lv~~nF 113 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK------T------IDDPRFSIIHGPF 113 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT------T------CCCTTEEEEESCG
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH------h------hcCCcEEEEeCCH
Confidence 46788899999999999999999999999988764 447999999997433321 1 1235899999999
Q ss_pred CCCc--ccc-ccc-ceEEEEEec
Q psy17227 123 LTEE--HRE-KIT-QASIVFVNN 141 (268)
Q Consensus 123 ~~l~--~~~-~~~-d~dvv~~~~ 141 (268)
.++. +.+ +.. .+|.|+.+.
T Consensus 114 ~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 114 SALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp GGHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCcccEEEECC
Confidence 9875 111 111 367777663
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.78 E-value=2.5e-05 Score=70.39 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=71.9
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHh--ccccccEEEEEcCCCCCc--ccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWY--GKRHGEFRLVKGDFLTEE--HRE 129 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~--~~~~~~i~~~~gD~~~l~--~~~ 129 (268)
.+..+||=||-|.|+.++.+.+ ++..+|+.|||++..+.+++ +.+....... ....++++++.+|..+.- ...
T Consensus 204 ~~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar--~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCK--KYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHH--HHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHH--hhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 3567999999999999999876 45577999999997666654 2221100000 012246999999987532 112
Q ss_pred cccceEEEEEecccc--CcCH---------HHHHHHHHhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFAF--GPTV---------DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~--~~~~---------~~~l~e~~r~LkpGG~~i~~ 168 (268)
....+|+|++..+-. .+++ ...++.+.+.|+|||.++.-
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 223578999875421 1111 23456777899999999863
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.77 E-value=4.5e-05 Score=68.32 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=58.5
Q ss_pred CcHHHHHHHHHHcCCCC------CCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcccc
Q psy17227 39 TSFDLISRMIDQINATP------DDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRH 112 (268)
Q Consensus 39 ~~~~~~~~ll~~l~~~~------~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~ 112 (268)
.....+.++++.+++.+ +++|||||.|.|.++..++......+|++||+++..+. .+++. . ..
T Consensus 36 ~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~------~L~~~---~--~~ 104 (353)
T 1i4w_A 36 WNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK------FLNAK---F--EG 104 (353)
T ss_dssp CCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH------HHHHH---T--TT
T ss_pred CCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH------HHHHh---c--cC
Confidence 34567788999998874 58999999999999999998665556999999985222 22221 1 13
Q ss_pred ccEEEEEcCCCCCc
Q psy17227 113 GEFRLVKGDFLTEE 126 (268)
Q Consensus 113 ~~i~~~~gD~~~l~ 126 (268)
++++++.+|+.++.
T Consensus 105 ~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 105 SPLQILKRDPYDWS 118 (353)
T ss_dssp SSCEEECSCTTCHH
T ss_pred CCEEEEECCccchh
Confidence 68999999998765
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.72 E-value=2.4e-05 Score=70.18 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCCHHHHHHHHH----------------hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEE--
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA----------------TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRL-- 117 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~----------------~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~-- 117 (268)
..+|+|+||++|..++.+... .+.-.|+.-|+... +....-+.+.. .. ...+..|
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~N--DFntlF~~L~~----~~-~~~~~~f~~ 124 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGN--DFNAIFRSLPI----EN-DVDGVCFIN 124 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTS--CHHHHHTTTTT----SC-SCTTCEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCch--HHHHHHHhcch----hc-ccCCCEEEE
Confidence 467999999999877654332 12236899999876 33321111110 00 0012234
Q ss_pred -EEcCCCCCcccccccceEEEEEeccccC-cC---------------------------------HHHHHHHHHhcCCCC
Q psy17227 118 -VKGDFLTEEHREKITQASIVFVNNFAFG-PT---------------------------------VDHALKERFQDLKDG 162 (268)
Q Consensus 118 -~~gD~~~l~~~~~~~d~dvv~~~~~~~~-~~---------------------------------~~~~l~e~~r~LkpG 162 (268)
+-|.+..-.|+++++ |+++++..+|| .+ +...|+..++.|+||
T Consensus 125 gvpgSFy~rlfp~~S~--d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTL--HFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp EEESCSSSCCSCTTCB--SCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred ecchhhhhccCCCCce--EEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 445666666777655 55777666555 22 122267778999999
Q ss_pred cEEEEe
Q psy17227 163 ARIVSS 168 (268)
Q Consensus 163 G~~i~~ 168 (268)
|+++++
T Consensus 203 G~mvl~ 208 (359)
T 1m6e_X 203 GRMVLT 208 (359)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 999986
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.50 E-value=0.0011 Score=57.34 Aligned_cols=122 Identities=14% Similarity=0.143 Sum_probs=71.9
Q ss_pred CccccccCCCCCCCCcccCcHHHH--HHHHHHcC-----CCCCCEEEEEcC------CCCHHHHHHHHHhCC-cEEEEEe
Q psy17227 21 EPEKLNVYQPFSPFVYGETSFDLI--SRMIDQIN-----ATPDDVFVDLGS------GVGQVVLQVAAATGC-KICWGVE 86 (268)
Q Consensus 21 ~~~~~~~y~~~~~~~~g~~~~~~~--~~ll~~l~-----~~~~~~vLDiGC------G~G~~~~~la~~~~~-~~v~GiD 86 (268)
+|=.+..|...-....|- ....+ .++++.++ ...|++|||+|+ -+|... +.+..+. ..++++|
T Consensus 69 e~c~l~nyg~~~~lp~g~-~~nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavD 145 (344)
T 3r24_A 69 EKCDLQNYGENAVIPKGI-MMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSD 145 (344)
T ss_dssp CCCCCCCCSCCTTSCTTC-CHHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEE
T ss_pred cccccccCCCCCCCCCCc-EeeHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEee
Confidence 455555665544434443 23322 34655553 456999999995 677742 2333333 2699999
Q ss_pred CCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEEEEEeccc----c-------CcCHHHHHHHH
Q psy17227 87 KADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASIVFVNNFA----F-------GPTVDHALKER 155 (268)
Q Consensus 87 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dvv~~~~~~----~-------~~~~~~~l~e~ 155 (268)
+.+- ....+ .+++||+..+... ..+|+|++.+.- + ...+.....++
T Consensus 146 L~~~-------------------~sda~-~~IqGD~~~~~~~---~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdf 202 (344)
T 3r24_A 146 LNDF-------------------VSDAD-STLIGDCATVHTA---NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF 202 (344)
T ss_dssp SSCC-------------------BCSSS-EEEESCGGGEEES---SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHH
T ss_pred Cccc-------------------ccCCC-eEEEccccccccC---CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHH
Confidence 9984 01123 4599998764432 357899986541 1 11233333344
Q ss_pred -HhcCCCCcEEEEe
Q psy17227 156 -FQDLKDGARIVSS 168 (268)
Q Consensus 156 -~r~LkpGG~~i~~ 168 (268)
.++|+|||.|++=
T Consensus 203 A~~~LkpGGsFvVK 216 (344)
T 3r24_A 203 IKQKLALGGSIAVK 216 (344)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHhCcCCCEEEEE
Confidence 4689999999974
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.42 E-value=0.00028 Score=60.32 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHH
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAE 96 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~ 96 (268)
...+.++++.. ..+|+.|||..||+|..++.+ ...|.. ++|+|+++..+.+++
T Consensus 199 ~~l~~~~i~~~-~~~~~~vlD~f~GsGtt~~~a-~~~gr~-~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 199 RDLIERIIRAS-SNPNDLVLDCFMGSGTTAIVA-KKLGRN-FIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHHH-CCTTCEEEESSCTTCHHHHHH-HHTTCE-EEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCEEEECCCCCCHHHHHH-HHcCCe-EEEEeCCHHHHHHHH
Confidence 44566677665 378999999999999999864 446765 999999997655554
No 302
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.08 E-value=0.0013 Score=58.87 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=65.1
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
+....++++|++||-+|||. |.++..+|+..|+.+|+++|.++. +.+. ++ ..|. . .++..+-.++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~--~~~~----a~----~lGa---~-~vi~~~~~~~ 247 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES--RLEL----AK----QLGA---T-HVINSKTQDP 247 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHH--HHHH----HH----HHTC---S-EEEETTTSCH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH--HHHH----HH----HcCC---C-EEecCCccCH
Confidence 44667899999999999987 888899999889866999999975 2221 11 2332 1 1222211111
Q ss_pred c--ccccc-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 E--HREKI-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~--~~~~~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ..+.. ..+|+++-..- ....+...++.|+|||+++..
T Consensus 248 ~~~~~~~~~gg~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 248 VAAIKEITDGGVNFALESTG-----SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HHHHHHHTTSCEEEEEECSC-----CHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhcCCCCcEEEECCC-----CHHHHHHHHHHHhcCCEEEEe
Confidence 1 00000 13677764311 135678889999999999975
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.95 E-value=0.0031 Score=57.03 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=66.1
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||-+|||. |.++..+|+..|+.+|+++|.++. +++ .++ ..| .+++.-+-.++
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~----~a~----~lG-----a~~i~~~~~~~ 241 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE--RLK----LLS----DAG-----FETIDLRNSAP 241 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH--HHH----HHH----TTT-----CEEEETTSSSC
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH--HHH----HHH----HcC-----CcEEcCCCcch
Confidence 33667899999999999987 888999999899856999999975 221 111 223 12332221121
Q ss_pred -c--ccc--cccceEEEEEeccccC---------cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 -E--HRE--KITQASIVFVNNFAFG---------PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 -~--~~~--~~~d~dvv~~~~~~~~---------~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ..+ +...+|+++-..-... .+....+...++.|+|||++++.
T Consensus 242 ~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 242 LRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 1 000 0113677764322110 01234688889999999999875
No 304
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.90 E-value=0.0039 Score=53.19 Aligned_cols=153 Identities=16% Similarity=0.180 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhhcCCccccccCCCCCCCCcccCcHHHHH------HHHHHcCCCCCCEEEEEcCCCCHHHHHHHHH---h
Q psy17227 7 LRHIIQQTYNQSVTEPEKLNVYQPFSPFVYGETSFDLIS------RMIDQINATPDDVFVDLGSGVGQVVLQVAAA---T 77 (268)
Q Consensus 7 ~~~~~~~~y~~~~~~~~~~~~y~~~~~~~~g~~~~~~~~------~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~---~ 77 (268)
.++|.+-+...-++.+++++.+.-|.. ...+. .+.+++.--|| .|+++||-.|+.++.+|.. +
T Consensus 23 ~~~l~~~~~~~~~~~~e~l~~~~~~~~-------~~~l~~~l~~~~l~~~i~~vpG-~ivE~GV~rG~S~~~~a~~~~~l 94 (257)
T 3tos_A 23 TQRLTKLLTNSPIPTEELVNNLPLFLR-------RHQMTDLLSMDALYRQVLDVPG-VIMEFGVRFGRHLGTFAALRGVY 94 (257)
T ss_dssp HHHHHHHHHTCCSCGGGGGGCGGGGCC-------HHHHHHHHHHHHHHHHTTTSCS-EEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCChHHHHHhHHhhhh-------HHHHHHHHHHHHHHHHhhCCCC-eEEEEecccCHHHHHHHHHHHHh
Confidence 334444444444567888988866554 22222 34444433466 5999999999999887653 1
Q ss_pred ----CCcEEEEEeCCCChhH---------------------HHH-HHHHHH--HHHHHhccccccEEEEEcCCCC-Cc-c
Q psy17227 78 ----GCKICWGVEKADLPAK---------------------YAE-MHTVFK--RWMQWYGKRHGEFRLVKGDFLT-EE-H 127 (268)
Q Consensus 78 ----~~~~v~GiD~s~~~~~---------------------~a~-~~~~~~--~~~~~~~~~~~~i~~~~gD~~~-l~-~ 127 (268)
...+|+|.|--+.+-. .+. ..+.++ +..+..+....+++++.|++.+ +| +
T Consensus 95 ~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~ 174 (257)
T 3tos_A 95 EPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRY 174 (257)
T ss_dssp CTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHH
T ss_pred cccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHH
Confidence 2356999993221110 111 111111 0001123323689999999976 44 1
Q ss_pred -cc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 128 -RE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 128 -~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ +...+|++++..=. -......+..++..|+|||.+++-
T Consensus 175 l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 175 LAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp HHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEES
T ss_pred HHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEc
Confidence 11 12246788887431 123455688888999999999994
No 305
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.75 E-value=0.0015 Score=59.04 Aligned_cols=106 Identities=13% Similarity=0.004 Sum_probs=66.5
Q ss_pred HHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-C
Q psy17227 48 IDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-E 125 (268)
Q Consensus 48 l~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l 125 (268)
+...++++|++||-+|||. |.+++.+|+..|+.+|+++|.++. +++. ++ ..|. +.+.-.-.+ +
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~--~~~~----a~----~lGa-----~~i~~~~~~~~ 242 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA--RLAH----AK----AQGF-----EIADLSLDTPL 242 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH--HHHH----HH----HTTC-----EEEETTSSSCH
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH--HHHH----HH----HcCC-----cEEccCCcchH
Confidence 3467899999999999976 888899999899867999999975 2221 11 2332 222211111 1
Q ss_pred c--ccc--cccceEEEEEecc----------ccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 E--HRE--KITQASIVFVNNF----------AFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~--~~~--~~~d~dvv~~~~~----------~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ..+ +...+|+|+-..- .|.++....+....+.|++||++++.
T Consensus 243 ~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 243 HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 1 000 0113677764321 12334456788999999999999875
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.69 E-value=0.0058 Score=53.45 Aligned_cols=114 Identities=19% Similarity=0.161 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHH---HHh-CCc--EEEEEeCCCCh------hHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVA---AAT-GCK--ICWGVEKADLP------AKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la---~~~-~~~--~v~GiD~s~~~------~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
++.-+|||+|-|+|-...... .+. +.. ..+++|..+-. ...+...+.+-..........-.+++..||
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 344579999999998654322 222 222 35778864310 011111111111000000011246788999
Q ss_pred CCC-CcccccccceEEEEEeccc--cCcCH--HHHHHHHHhcCCCCcEEEEe
Q psy17227 122 FLT-EEHREKITQASIVFVNNFA--FGPTV--DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~-l~~~~~~~d~dvv~~~~~~--~~~~~--~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+ ++--+ .+.+|+++...+. ..|++ ...|+.+++.++|||+++++
T Consensus 175 a~~~l~~l~-~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 175 ARKRIKEVE-NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHHHGGGCC-SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEES
T ss_pred HHHHHhhhc-ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEE
Confidence 875 33211 2357999988763 33443 46789999999999999975
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.64 E-value=0.0048 Score=54.80 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=63.1
Q ss_pred HHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-C
Q psy17227 48 IDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-E 125 (268)
Q Consensus 48 l~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l 125 (268)
+...++++|++||-+|||. |.++..+|+..|+.+|+++|.++. +.+. ++ ..|. . .++..+-.+ .
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~----a~----~lGa---~-~vi~~~~~~~~ 229 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT--RLSK----AK----EIGA---D-LVLQISKESPQ 229 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH--HHHH----HH----HTTC---S-EEEECSSCCHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH--HHHH----HH----HhCC---C-EEEcCcccccc
Confidence 3667899999999999986 888889999889856999999874 2211 11 2332 1 122211000 0
Q ss_pred ccccc----c-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREK----I-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~----~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+. . ..+|+++-..- ....+...++.|+|||+++..
T Consensus 230 ~~~~~i~~~~~~g~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 230 EIARKVEGQLGCKPEVTIECTG-----AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHHHHHHTSCCSEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred hHHHHHHHHhCCCCCEEEECCC-----ChHHHHHHHHHhcCCCEEEEE
Confidence 10000 0 13566664211 134577888999999999975
No 308
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.61 E-value=0.0032 Score=50.88 Aligned_cols=97 Identities=18% Similarity=0.255 Sum_probs=60.8
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||..|+ |.|..+..+++..|+. |++++.++. ..+ .++ ..|. ...+ |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~~~~--~~~----~~~----~~g~---~~~~---d~~~~~ 94 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR-IYTTAGSDA--KRE----MLS----RLGV---EYVG---DSRSVD 94 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCE-EEEEESSHH--HHH----HHH----TTCC---SEEE---ETTCST
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCE-EEEEeCCHH--HHH----HHH----HcCC---CEEe---eCCcHH
Confidence 4468899999999994 5677788888878886 999999864 111 111 1221 1111 333321
Q ss_pred cccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+. ...+|+++.+.- ...+....+.|+|||+++..
T Consensus 95 ~~~~~~~~~~~~~~D~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 95 FADEILELTDGYGVDVVLNSLA------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHHHHHHTTTCCEEEEEECCC------THHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCCeEEEECCc------hHHHHHHHHHhccCCEEEEE
Confidence 1110 113677775432 24678888999999999975
No 309
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.59 E-value=0.006 Score=54.56 Aligned_cols=101 Identities=20% Similarity=0.184 Sum_probs=65.2
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||=+|+|. |.+++.+|+..|+.+|+++|.++....++ +..|.. .++ |..+.
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----------~~lGa~----~vi--~~~~~ 237 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLA----------EEVGAT----ATV--DPSAG 237 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH----------HHHTCS----EEE--CTTSS
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----------HHcCCC----EEE--CCCCc
Confidence 34777899999999999976 78888899989996699999997522211 123421 122 22221
Q ss_pred ccccc--------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREK--------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~--------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+. ...+|+++-. . .....+....+.|+|||++++.
T Consensus 238 ~~~~~i~~~~~~~~gg~Dvvid~-~----G~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 238 DVVEAIAGPVGLVPGGVDVVIEC-A----GVAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp CHHHHHHSTTSSSTTCEEEEEEC-S----CCHHHHHHHHHHEEEEEEEEEC
T ss_pred CHHHHHHhhhhccCCCCCEEEEC-C----CCHHHHHHHHHHhccCCEEEEE
Confidence 11000 0136777642 1 1245678889999999999986
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.59 E-value=0.0045 Score=54.78 Aligned_cols=97 Identities=14% Similarity=0.070 Sum_probs=63.6
Q ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+...++++|++||-+|+|. |.++..+|+..|+. |++++.++.-..+++ +.|. .. ++ .|...
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~----------~lGa--~~--v~-~~~~~ 230 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAE-VSVFARNEHKKQDAL----------SMGV--KH--FY-TDPKQ 230 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCE-EEEECSSSTTHHHHH----------HTTC--SE--EE-SSGGG
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHH----------hcCC--Ce--ec-CCHHH
Confidence 345667899999999999986 88888999988985 999999986222221 2332 12 22 23211
Q ss_pred CcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ .. .+|+++-..- . + ..+...++.|+|||+++..
T Consensus 231 ~--~~---~~D~vid~~g-~-~---~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 231 C--KE---ELDFIISTIP-T-H---YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp C--CS---CEEEEEECCC-S-C---CCHHHHHTTEEEEEEEEEC
T ss_pred H--hc---CCCEEEECCC-c-H---HHHHHHHHHHhcCCEEEEE
Confidence 1 11 4677764211 1 1 2466788999999999986
No 311
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.58 E-value=0.0063 Score=53.61 Aligned_cols=101 Identities=23% Similarity=0.265 Sum_probs=65.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+...++++|++||-+|||. |.++..+|+..|+. |+++|.++. +.+ .++ ..|. .. ++ |..+
T Consensus 157 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~--~~~----~~~----~lGa---~~-~i--~~~~ 219 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLR-VAAVDIDDA--KLN----LAR----RLGA---EV-AV--NARD 219 (340)
T ss_dssp HHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCE-EEEEESCHH--HHH----HHH----HTTC---SE-EE--ETTT
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCHH--HHH----HHH----HcCC---CE-EE--eCCC
Confidence 345667899999999999986 89999999999985 999999975 221 111 2332 11 22 2222
Q ss_pred Cccccc----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREK----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+.+. ...+|+++-... -...+....+.|+|||+++..
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAV-----SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred cCHHHHHHHhCCCCCEEEEeCC-----CHHHHHHHHHHhccCCEEEEe
Confidence 111111 113566664311 245678888999999999975
No 312
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.42 E-value=0.011 Score=53.11 Aligned_cols=73 Identities=18% Similarity=0.059 Sum_probs=50.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc------c
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE------K 130 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~------~ 130 (268)
.+|+|+-||.|+++.-+.. .|...+.++|+++.+. +.++. ..++..++++|+.++...+ .
T Consensus 3 ~~vidLFsG~GGlslG~~~-aG~~~v~avE~d~~a~------~t~~~-------N~~~~~~~~~DI~~~~~~~~~~~~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR-AGFDVKMAVEIDQHAI------NTHAI-------NFPRSLHVQEDVSLLNAEIIKGFFKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH-HTCEEEEEECSCHHHH------HHHHH-------HCTTSEEECCCGGGCCHHHHHHHHCS
T ss_pred CeEEEEccCcCHHHHHHHH-CCCcEEEEEeCCHHHH------HHHHH-------hCCCCceEecChhhcCHHHHHhhccc
Confidence 5899999999999987654 5887788999998522 22221 1246778999998875321 1
Q ss_pred ccceEEEEEeccc
Q psy17227 131 ITQASIVFVNNFA 143 (268)
Q Consensus 131 ~~d~dvv~~~~~~ 143 (268)
..++|+++....|
T Consensus 69 ~~~~D~i~ggpPC 81 (376)
T 3g7u_A 69 DMPIDGIIGGPPC 81 (376)
T ss_dssp CCCCCEEEECCCC
T ss_pred CCCeeEEEecCCC
Confidence 2357888876544
No 313
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.42 E-value=0.013 Score=52.34 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=63.2
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT- 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~- 124 (268)
+....++++|++||-+|+|. |.++..+|+..|+.+|+++|.++....+++ ..|. . .++ |..+
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----------~lGa---~-~vi--~~~~~ 247 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----------VFGA---T-DFV--NPNDH 247 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----------HTTC---C-EEE--CGGGC
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----------HhCC---c-eEE--ecccc
Confidence 34567889999999999875 777888899889866999999986222221 2332 1 122 2211
Q ss_pred -Cccccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 125 -EEHREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 125 -l~~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
..+.+. ...+|+++-..- ....+...++.|+|| |+++..
T Consensus 248 ~~~~~~~~~~~~~~g~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 248 SEPISQVLSKMTNGGVDFSLECVG-----NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SSCHHHHHHHHHTSCBSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred chhHHHHHHHHhCCCCCEEEECCC-----CHHHHHHHHHHhhcCCcEEEEE
Confidence 011010 013566664211 135678889999999 999975
No 314
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.37 E-value=0.0074 Score=47.20 Aligned_cols=112 Identities=17% Similarity=0.152 Sum_probs=70.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 45 SRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 45 ~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
...+.+..--+|. |||+|=|+|+.--++...++...++.+|-.-...- ....+.-.++.||+.+
T Consensus 31 ~~a~~~v~~~~Gp-VlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp---------------~~~P~~e~~ilGdi~~ 94 (174)
T 3iht_A 31 EHAIAQTAGLSGP-VYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP---------------DSTPPEAQLILGDIRE 94 (174)
T ss_dssp HHHHHHTTTCCSC-EEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG---------------GGCCCGGGEEESCHHH
T ss_pred HHHHHHhcCCCCc-eEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC---------------CCCCchHheecccHHH
Confidence 3455555555666 99999999999999988888888999998642000 0123455689999876
Q ss_pred -CcccccccceEEEEEecc--ccCcCHHHHH----HHH-HhcCCCCcEEEEeCCCC
Q psy17227 125 -EEHREKITQASIVFVNNF--AFGPTVDHAL----KER-FQDLKDGARIVSSKSFC 172 (268)
Q Consensus 125 -l~~~~~~~d~dvv~~~~~--~~~~~~~~~l----~e~-~r~LkpGG~~i~~~~~~ 172 (268)
+|.....+-..+.+++.= .+.++...++ ..+ ..+|.|||.+++..++.
T Consensus 95 tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 95 TLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred HHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 443211122335555432 3444444443 333 36999999999975553
No 315
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.36 E-value=0.014 Score=52.20 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=64.1
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC--CC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD--FL 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD--~~ 123 (268)
+....++++|++||=+|+|. |.++..+|+..|+.+|+++|.++.-..+++ +.|.. .++.-. -.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----------~lGa~----~vi~~~~~~~ 250 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----------KFGVN----EFVNPKDHDK 250 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----------TTTCC----EEECGGGCSS
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----------HcCCc----EEEccccCch
Confidence 44667899999999999974 888889999899856999999986222221 23321 122111 11
Q ss_pred CCc-----ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 124 TEE-----HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 124 ~l~-----~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
++. .... .+|+++-.. .-...+....+.|+|| |++++.
T Consensus 251 ~~~~~i~~~~~g--g~D~vid~~-----g~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 251 PIQEVIVDLTDG--GVDYSFECI-----GNVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp CHHHHHHHHTTS--CBSEEEECS-----CCHHHHHHHHHTBCTTTCEEEEC
T ss_pred hHHHHHHHhcCC--CCCEEEECC-----CCHHHHHHHHHHhhccCCEEEEE
Confidence 111 0011 356666421 1235678889999997 999976
No 316
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.35 E-value=0.013 Score=51.57 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=62.9
Q ss_pred HHHHHcCCCCCCEEEEEcCC--CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSG--VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG--~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
.+....++++|++||-+||| .|..+..+|+..|+. |++++.++.....++ +.|. .. .+ |..
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~~~~~~~----------~lga---~~-~~--~~~ 197 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFR-LIAVTRNNKHTEELL----------RLGA---AY-VI--DTS 197 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEEEESSSTTHHHHH----------HHTC---SE-EE--ETT
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH----------hCCC---cE-EE--eCC
Confidence 34566789999999999987 688899999989985 999999986222221 1232 11 22 222
Q ss_pred CCcccc------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHRE------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..+.+ +...+|+++-+.- .....+..+.|+|||+++..
T Consensus 198 ~~~~~~~~~~~~~~~g~Dvvid~~g------~~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 198 TAPLYETVMELTNGIGADAAIDSIG------GPDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp TSCHHHHHHHHTTTSCEEEEEESSC------HHHHHHHHHTEEEEEEEEEC
T ss_pred cccHHHHHHHHhCCCCCcEEEECCC------ChhHHHHHHHhcCCCEEEEE
Confidence 221111 0124677764322 12234455899999999986
No 317
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.29 E-value=0.017 Score=51.44 Aligned_cols=103 Identities=16% Similarity=0.059 Sum_probs=63.6
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC-C-C
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD-F-L 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD-~-~ 123 (268)
+....++++|++||-+|||. |.+++.+|+..|+.+|+++|.++....+++ ..|. . .++.-+ . .
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----------~lGa---~-~vi~~~~~~~ 248 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----------ELGA---T-ECLNPKDYDK 248 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----------HTTC---S-EEECGGGCSS
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----------HcCC---c-EEEecccccc
Confidence 44567899999999999875 777888899889866999999986222221 2332 1 122111 0 1
Q ss_pred CCc--ccccc-cceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 124 TEE--HREKI-TQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 124 ~l~--~~~~~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
++. ...-. ..+|+++-..- ....+...++.|+|| |+++..
T Consensus 249 ~~~~~i~~~t~gg~Dvvid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 249 PIYEVICEKTNGGVDYAVECAG-----RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred hHHHHHHHHhCCCCCEEEECCC-----CHHHHHHHHHHHhcCCCEEEEE
Confidence 111 00000 13566664211 135678888999999 999975
No 318
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.25 E-value=0.016 Score=51.70 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=63.2
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEE-cCC-C
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVK-GDF-L 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~-gD~-~ 123 (268)
+....++++|++||-+|+|. |.++..+|+..|+.+|+++|.++....+++ ..|.. .++. .+. .
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----------~lGa~----~vi~~~~~~~ 247 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----------EFGAT----ECINPQDFSK 247 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----------HHTCS----EEECGGGCSS
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----------HcCCc----eEeccccccc
Confidence 34566889999999999875 777888888889866999999986222221 22321 1121 110 1
Q ss_pred CCc--cccc-ccceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 124 TEE--HREK-ITQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 124 ~l~--~~~~-~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
++. ...- ...+|+++-..- ....+...++.|+|| |+++..
T Consensus 248 ~~~~~v~~~~~~g~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 248 PIQEVLIEMTDGGVDYSFECIG-----NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred cHHHHHHHHhCCCCCEEEECCC-----cHHHHHHHHHhhccCCcEEEEE
Confidence 111 0000 013566664211 135678889999999 999975
No 319
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.23 E-value=0.017 Score=51.49 Aligned_cols=103 Identities=15% Similarity=0.026 Sum_probs=62.9
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC--C
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF--L 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~--~ 123 (268)
+....++++|++||-+|+|. |.++..+|+..|+.+|+++|.++....+++ ..|. . .++..+- .
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----------~lGa---~-~vi~~~~~~~ 248 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----------EVGA---T-ECVNPQDYKK 248 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----------HTTC---S-EEECGGGCSS
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----------HhCC---c-eEecccccch
Confidence 33556889999999999876 777888888889856999999986222221 2332 1 1221110 1
Q ss_pred CCc--cccc-ccceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 124 TEE--HREK-ITQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 124 ~l~--~~~~-~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
++. ...- ...+|+++-..- ....+...++.|++| |+++..
T Consensus 249 ~~~~~~~~~~~~g~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 249 PIQEVLTEMSNGGVDFSFEVIG-----RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CHHHHHHHHTTSCBSEEEECSC-----CHHHHHHHHHHBCTTTCEEEEC
T ss_pred hHHHHHHHHhCCCCcEEEECCC-----CHHHHHHHHHHhhcCCcEEEEe
Confidence 111 0000 013566664211 135678888999999 999975
No 320
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.16 E-value=0.02 Score=51.07 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=63.0
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT- 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~- 124 (268)
+....++++|++||-+|+|. |.+++.+|+..|+.+|+++|.++....+++ ..|. . .++ |..+
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----------~lGa---~-~vi--~~~~~ 250 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----------ALGA---T-DCL--NPREL 250 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----------HTTC---S-EEE--CGGGC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----------HhCC---c-EEE--ccccc
Confidence 34567889999999999875 777888899889866999999986222221 2332 1 112 2211
Q ss_pred -Cccccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCC-cEEEEe
Q psy17227 125 -EEHREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDG-ARIVSS 168 (268)
Q Consensus 125 -l~~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpG-G~~i~~ 168 (268)
-++.+. ...+|+++-. . .-...+...++.|++| |+++..
T Consensus 251 ~~~~~~~v~~~~~~g~Dvvid~-~----G~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 251 DKPVQDVITELTAGGVDYSLDC-A----GTAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SSCHHHHHHHHHTSCBSEEEES-S----CCHHHHHHHHHTBCTTTCEEEEC
T ss_pred cchHHHHHHHHhCCCccEEEEC-C----CCHHHHHHHHHHhhcCCCEEEEE
Confidence 011000 0135666642 1 1135678889999999 999975
No 321
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.11 E-value=0.0098 Score=52.20 Aligned_cols=101 Identities=22% Similarity=0.249 Sum_probs=64.8
Q ss_pred HHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 46 RMIDQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
.+.+..++++|++||-.|| |.|..+..+++..|+. |++++.++. +.+. +. +..|. .. .+ |..
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~---~~~g~---~~-~~--~~~ 203 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCR-VVGIAGGAE--KCRF----LV---EELGF---DG-AI--DYK 203 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH---HTTCC---SE-EE--ETT
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH---HHcCC---CE-EE--ECC
Confidence 3446778999999999998 6788899999888985 999999874 2211 10 12232 11 12 222
Q ss_pred CCccccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..+.+. ...+|+++-+.- ...+....+.|+|||+++..
T Consensus 204 ~~~~~~~~~~~~~~~~d~vi~~~g------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 204 NEDLAAGLKRECPKGIDVFFDNVG------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp TSCHHHHHHHHCTTCEEEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCceEEEECCC------cchHHHHHHHHhhCCEEEEE
Confidence 2221111 013677765322 24688888999999999975
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.11 E-value=0.0059 Score=54.11 Aligned_cols=103 Identities=15% Similarity=0.065 Sum_probs=64.2
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||=+|+|. |.++..+|+..|..+|+++|.++. +.+ .++ +.|.. .++..+-.++
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~--~~~----~~~----~lGa~----~vi~~~~~~~ 223 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH--CCD----IAL----EYGAT----DIINYKNGDI 223 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH--HHH----HHH----HHTCC----EEECGGGSCH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH--HHH----HHH----HhCCc----eEEcCCCcCH
Confidence 45778899999999999986 778888899889855999999874 221 111 23321 1222111111
Q ss_pred c--ccc--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 E--HRE--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~--~~~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ..+ +...+|+++-. . - -...+...++.|+|||+++..
T Consensus 224 ~~~v~~~t~g~g~D~v~d~-~-g---~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 224 VEQILKATDGKGVDKVVIA-G-G---DVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHHHHHHTTTCCEEEEEEC-S-S---CTTHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHcCCCCCCEEEEC-C-C---ChHHHHHHHHHHhcCCEEEEe
Confidence 1 000 01136777642 2 1 124677888999999999976
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.10 E-value=0.021 Score=50.48 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=63.0
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC-CCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD-FLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD-~~~ 124 (268)
.+...++++|++||-+|+|. |.++..+|+..|+. |+++|.++. +.+ .++ ..|. . .++..+ -.+
T Consensus 160 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~--~~~----~~~----~lGa---~-~~~~~~~~~~ 224 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPR--RLE----VAK----NCGA---D-VTLVVDPAKE 224 (352)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHH--HHH----HHH----HTTC---S-EEEECCTTTS
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHH--HHH----HHH----HhCC---C-EEEcCccccc
Confidence 34667899999999999875 77788888888987 999999874 221 111 2332 1 122211 011
Q ss_pred Cc--cccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE--HREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~--~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. ..+. ...+|+++-..- ....+....+.|+|||+++..
T Consensus 225 ~~~~i~~~~~~~~g~g~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 225 EESSIIERIRSAIGDLPNVTIDCSG-----NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CHHHHHHHHHHHSSSCCSEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHhccccCCCCCEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 11 1000 013567664311 134577888999999999975
No 324
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.03 E-value=0.075 Score=46.96 Aligned_cols=116 Identities=11% Similarity=0.129 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHH---HHHHhcc------------ccccEEEE
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKR---WMQWYGK------------RHGEFRLV 118 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~---~~~~~~~------------~~~~i~~~ 118 (268)
.+...|+.||||.......+....+...++-||. |+.+...+ +.+.+ .+...|. ...+.+++
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~--~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v 172 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKN--SILRESEILRISLGLSKEDTAKSPFLIDQGRYKLA 172 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHH--HHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHH--HHhhhccchhhhcccccccccccccccCCCceEEE
Confidence 4567899999999999998876544445788888 33222221 22221 0001110 12579999
Q ss_pred EcCCCCCcc-----cc--cccceEEEEEeccc--cCcC-HHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 119 KGDFLTEEH-----RE--KITQASIVFVNNFA--FGPT-VDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 119 ~gD~~~l~~-----~~--~~~d~dvv~~~~~~--~~~~-~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
.+|+.+... .. +....++++++.++ +.++ ....++.+.+.. |||.+++.+.+.|
T Consensus 173 ~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 173 ACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp ECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred ecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 999998532 11 11224577777663 3444 334455555555 7888877666554
No 325
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.99 E-value=0.014 Score=51.14 Aligned_cols=99 Identities=23% Similarity=0.274 Sum_probs=62.9
Q ss_pred HHHHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+....++++|++||-.|| |.|..+..+++..|+. |+++|.++. ..+. ++ ..|. ...+ |..+
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~~~~--~~~~----~~----~~g~---~~~~---d~~~ 199 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCK-VVGAAGSDE--KIAY----LK----QIGF---DAAF---NYKT 199 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HTTC---SEEE---ETTS
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----hcCC---cEEE---ecCC
Confidence 445678999999999998 6788888888888885 999999864 2211 11 1221 1112 3332
Q ss_pred -Cccccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 -EEHREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 -l~~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
-.+.+. ...+|+++.+.- ...+...++.|+|||+++..
T Consensus 200 ~~~~~~~~~~~~~~~~d~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 200 VNSLEEALKKASPDGYDCYFDNVG------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CSCHHHHHHHHCTTCEEEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCC------hHHHHHHHHHHhcCCEEEEE
Confidence 111010 013677765432 13578888999999999875
No 326
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.98 E-value=0.0046 Score=54.97 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=47.5
Q ss_pred CEEEEEcCCCCHHHHHHHHHhC--CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-ccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATG--CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK-ITQ 133 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~--~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~-~~d 133 (268)
.+|+|+-||.|++...+.. .| ...|+++|+++.+... ++. + .++..++++|+.++...+- ..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~-~G~~~~~v~~~E~d~~a~~~------~~~---N----~~~~~~~~~Di~~~~~~~~~~~~ 68 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRE-SCIPAQVVAAIDVNTVANEV------YKY---N----FPHTQLLAKTIEGITLEEFDRLS 68 (343)
T ss_dssp EEEEEETCTTCHHHHHHHH-HTCSEEEEEEECCCHHHHHH------HHH---H----CTTSCEECSCGGGCCHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHH-CCCCceEEEEEeCCHHHHHH------HHH---h----ccccccccCCHHHccHhHcCcCC
Confidence 5799999999999987765 46 4568999999863222 221 1 2245588999988652110 014
Q ss_pred eEEEEEecc
Q psy17227 134 ASIVFVNNF 142 (268)
Q Consensus 134 ~dvv~~~~~ 142 (268)
+|+++....
T Consensus 69 ~D~l~~gpP 77 (343)
T 1g55_A 69 FDMILMSPP 77 (343)
T ss_dssp CSEEEECCC
T ss_pred cCEEEEcCC
Confidence 678876544
No 327
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.018 Score=50.86 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=63.5
Q ss_pred HHHHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+...++++|++||-+|+ |.|..+..+++..|.. |++++.++.. .+. ++ ..|. .. ++ |..+
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-V~~~~~~~~~--~~~----~~----~~g~---~~-~~--d~~~ 223 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR-VLGIDGGEGK--EEL----FR----SIGG---EV-FI--DFTK 223 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSTTH--HHH----HH----HTTC---CE-EE--ETTT
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCc-EEEEcCCHHH--HHH----HH----HcCC---ce-EE--ecCc
Confidence 445568899999999998 5788888888888885 9999998862 221 11 1221 11 11 4331
Q ss_pred -Ccccccc-----cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 -EEHREKI-----TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 -l~~~~~~-----~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+.+.. ..+|+++.+.- ....+....+.|++||+++..
T Consensus 224 ~~~~~~~~~~~~~~~~D~vi~~~g-----~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 224 EKDIVGAVLKATDGGAHGVINVSV-----SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CSCHHHHHHHHHTSCEEEEEECSS-----CHHHHHHHTTSEEEEEEEEEC
T ss_pred cHhHHHHHHHHhCCCCCEEEECCC-----cHHHHHHHHHHHhcCCEEEEE
Confidence 1111100 03677765422 235678889999999999975
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.88 E-value=0.0099 Score=53.17 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=62.1
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+..+++++|++||-+|+|. |.++..+|+..|+. |++++.++.....++ +.|.. .++ |..+.
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-Vi~~~~~~~~~~~a~----------~lGa~----~vi--~~~~~ 248 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH-VVAFTTSEAKREAAK----------ALGAD----EVV--NSRNA 248 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHH----------HHTCS----EEE--ETTCH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH----------HcCCc----EEe--ccccH
Confidence 44556899999999999985 78888899888987 999999986222221 22321 112 22221
Q ss_pred ccccc-ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREK-ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~-~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+... ...+|+++-..- . + ..+....+.|+|||+++..
T Consensus 249 ~~~~~~~~g~Dvvid~~g-~-~---~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 249 DEMAAHLKSFDFILNTVA-A-P---HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp HHHHTTTTCEEEEEECCS-S-C---CCHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhhcCCCEEEECCC-C-H---HHHHHHHHHhccCCEEEEe
Confidence 11000 124677764321 1 1 2356778999999999975
No 329
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.87 E-value=0.013 Score=50.93 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=58.6
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||=+|+|. |.++..+|+..|+. |++++ |+.-..+++ +.|. -.++. |..++
T Consensus 134 al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~-Vi~~~-~~~~~~~~~----------~lGa----~~v~~-d~~~v 196 (315)
T 3goh_A 134 AFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYV-VDLVS-ASLSQALAA----------KRGV----RHLYR-EPSQV 196 (315)
T ss_dssp HHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCE-EEEEC-SSCCHHHHH----------HHTE----EEEES-SGGGC
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEE-ChhhHHHHH----------HcCC----CEEEc-CHHHh
Confidence 33677899999999999974 88889999999994 99999 876222221 2332 12222 31112
Q ss_pred cccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+|+++-. . . ...+....+.|+|||+++..
T Consensus 197 -----~~g~Dvv~d~-~--g---~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 -----TQKYFAIFDA-V--N---SQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp -----CSCEEEEECC-------------TTGGGEEEEEEEEEE
T ss_pred -----CCCccEEEEC-C--C---chhHHHHHHHhcCCCEEEEE
Confidence 1246776632 1 0 11235667999999999976
No 330
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.85 E-value=0.023 Score=51.63 Aligned_cols=68 Identities=13% Similarity=0.295 Sum_probs=45.1
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHH-HHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhcccc-ccEEEEEcCCCC
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVA-AATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRH-GEFRLVKGDFLT 124 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la-~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~i~~~~gD~~~ 124 (268)
.++++++|+||||+.|..+..++ +..+. .+|+++|.+|. ..+..+++++.+ . .+ .. .++++++.-+.+
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~--~~~~L~~n~~~~-~-N~-~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRI--NLQTLQNVLRRY-T-DT-NFASRITVHGCGAGE 293 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHH--HHHHHHHHHHHT-T-TS-TTGGGEEEECSEECS
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHH--HHHHHHHHHHhh-h-cc-CCCCCEEEEEeEEEC
Confidence 46899999999999999999888 44543 57999999996 333233333210 0 01 12 578887766654
No 331
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.84 E-value=0.032 Score=49.45 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=64.4
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||=+|+|. |.+++.+|+..|+..|+++|.++.-..++ ++ .+ ..-+.+...+....
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a------~~----l~--~~~~~~~~~~~~~~ 238 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA------KE----IC--PEVVTHKVERLSAE 238 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH------HH----HC--TTCEEEECCSCCHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH------HH----hc--hhcccccccccchH
Confidence 44677899999999999976 88888999988987799999997522221 11 11 11222221111111
Q ss_pred cccc------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHRE------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+ +...+|+++-. . .-...+....+.|+|||+++..
T Consensus 239 ~~~~~v~~~t~g~g~Dvvid~-~----g~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 239 ESAKKIVESFGGIEPAVALEC-T----GVESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHHHHHHTSSCCCSEEEEC-S----CCHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHhCCCCCCEEEEC-C----CChHHHHHHHHHhcCCCEEEEE
Confidence 1101 01135666642 1 1234678888999999999986
No 332
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.72 E-value=0.016 Score=50.91 Aligned_cols=53 Identities=23% Similarity=0.184 Sum_probs=40.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHH
Q psy17227 41 FDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAE 96 (268)
Q Consensus 41 ~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~ 96 (268)
...+.+++... ..+|+.|||--||+|..+.. |...|.. ++|+|+++....+++
T Consensus 239 ~~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~a-a~~~gr~-~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 239 AKLPEFFIRML-TEPDDLVVDIFGGSNTTGLV-AERESRK-WISFEMKPEYVAASA 291 (323)
T ss_dssp THHHHHHHHHH-CCTTCEEEETTCTTCHHHHH-HHHTTCE-EEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCEEEECCCCCCHHHHH-HHHcCCC-EEEEeCCHHHHHHHH
Confidence 45566777654 57899999999999999975 5556766 999999997555544
No 333
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.65 E-value=0.023 Score=50.31 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=61.9
Q ss_pred HHHcCCCCC------CEEEEEcCCC-CHHH-HHHH-HHhCCcEEEEEeCCCC---hhHHHHHHHHHHHHHHHhccccccE
Q psy17227 48 IDQINATPD------DVFVDLGSGV-GQVV-LQVA-AATGCKICWGVEKADL---PAKYAEMHTVFKRWMQWYGKRHGEF 115 (268)
Q Consensus 48 l~~l~~~~~------~~vLDiGCG~-G~~~-~~la-~~~~~~~v~GiD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~i 115 (268)
+...++++| ++||=+|+|. |.++ ..+| +..|+.+|++++.++. ...+++ +.|.
T Consensus 159 l~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----------~lGa----- 223 (357)
T 2b5w_A 159 LEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----------ELDA----- 223 (357)
T ss_dssp HHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----------HTTC-----
T ss_pred HHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----------HcCC-----
Confidence 356678899 9999999854 6667 7778 7778866999999874 222222 2232
Q ss_pred EEEEcCCCCCcccc---cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 116 RLVKGDFLTEEHRE---KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 116 ~~~~gD~~~l~~~~---~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+ |..+..+.+ -...+|+++-. . .-...+...++.|+|||+++..
T Consensus 224 ~~v--~~~~~~~~~i~~~~gg~Dvvid~-~----g~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 224 TYV--DSRQTPVEDVPDVYEQMDFIYEA-T----GFPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEE--ETTTSCGGGHHHHSCCEEEEEEC-S----CCHHHHHHHHHHEEEEEEEEEC
T ss_pred ccc--CCCccCHHHHHHhCCCCCEEEEC-C----CChHHHHHHHHHHhcCCEEEEE
Confidence 222 333222111 00136777642 1 1134678888999999999975
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.58 E-value=0.016 Score=51.50 Aligned_cols=99 Identities=16% Similarity=0.035 Sum_probs=62.2
Q ss_pred HHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-
Q psy17227 49 DQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE- 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~- 126 (268)
+..++++|++||=+|||. |.++..+|+..|+. |++++.++. +.+. ++ ..|. . .++..+-.++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~-Vi~~~~~~~--~~~~----~~----~lGa---~-~vi~~~~~~~~~ 247 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE-VIVTSSSRE--KLDR----AF----ALGA---D-HGINRLEEDWVE 247 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH----HH----HHTC---S-EEEETTTSCHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEecCch--hHHH----HH----HcCC---C-EEEcCCcccHHH
Confidence 567899999999999886 78888889988985 999999874 2221 11 2332 1 12222212211
Q ss_pred -ccc--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 -HRE--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 -~~~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
... +...+|+++-..- . ..+....+.|+|||+++..
T Consensus 248 ~v~~~~~g~g~D~vid~~g---~---~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 248 RVYALTGDRGADHILEIAG---G---AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHHHHHTTCCEEEEEEETT---S---SCHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCCceEEEECCC---h---HHHHHHHHHhhcCCEEEEE
Confidence 000 1114677765322 1 2466778899999999976
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.53 E-value=0.052 Score=47.68 Aligned_cols=100 Identities=21% Similarity=0.273 Sum_probs=63.1
Q ss_pred HHHHcCCCCCCEEEEEcCC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||-+|+| .|.++..+|+..|.. |++++.++. ..+. ++ ..|. . .+ .|..+.
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~lGa---~-~~--~d~~~~ 218 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIGDE--KLEL----AK----ELGA---D-LV--VNPLKE 218 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCE-EEEECSCHH--HHHH----HH----HTTC---S-EE--ECTTTS
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEeCCHH--HHHH----HH----HCCC---C-EE--ecCCCc
Confidence 4455689999999999996 478888888888885 999999874 2211 11 2332 1 11 143322
Q ss_pred cccccc----cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKI----TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~----~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+.. ..+|+++-..- ....+....+.|++||+++..
T Consensus 219 ~~~~~~~~~~~~~d~vid~~g-----~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 219 DAAKFMKEKVGGVHAAVVTAV-----SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp CHHHHHHHHHSSEEEEEESSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred cHHHHHHHHhCCCCEEEECCC-----CHHHHHHHHHHhhcCCEEEEe
Confidence 211110 24677764321 134678888999999999975
No 336
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.49 E-value=0.037 Score=48.59 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=42.9
Q ss_pred cCcHHHHHHHHHHcCCCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCC---ChhHHHH
Q psy17227 38 ETSFDLISRMIDQINATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKAD---LPAKYAE 96 (268)
Q Consensus 38 ~~~~~~~~~ll~~l~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~---~~~~~a~ 96 (268)
......+.+++... ..+|+.|||--||+|..+.. |...|.. .+|+|+++ ....+++
T Consensus 226 ~kp~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~a-a~~~~r~-~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 226 QKPAAVIERLVRAL-SHPGSTVLDFFAGSGVTARV-AIQEGRN-SICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp CCCHHHHHHHHHHH-SCTTCEEEETTCTTCHHHHH-HHHHTCE-EEEEESSTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh-CCCCCEEEecCCCCCHHHHH-HHHcCCc-EEEEECCccHHHHHHHHH
Confidence 34456677777765 47899999999999999985 4456766 99999999 7555543
No 337
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.48 E-value=0.022 Score=50.25 Aligned_cols=70 Identities=20% Similarity=0.316 Sum_probs=46.4
Q ss_pred CCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceE
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQAS 135 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~d 135 (268)
+.+|+|+.||.|++...+.. .|...+.++|+++.+... ++. +.+ .. .++|+.++... ...++|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~-aG~~~v~~~e~d~~a~~t------~~~---N~~----~~--~~~Di~~~~~~-~~~~~D 73 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES-CGAECVYSNEWDKYAQEV------YEM---NFG----EK--PEGDITQVNEK-TIPDHD 73 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH-TTCEEEEEECCCHHHHHH------HHH---HHS----CC--CBSCGGGSCGG-GSCCCS
T ss_pred CCcEEEECCCcCHHHHHHHH-CCCeEEEEEeCCHHHHHH------HHH---HcC----CC--CcCCHHHcCHh-hCCCCC
Confidence 56899999999999987654 688888999999862222 221 111 11 17898876532 223578
Q ss_pred EEEEecc
Q psy17227 136 IVFVNNF 142 (268)
Q Consensus 136 vv~~~~~ 142 (268)
+++....
T Consensus 74 ~l~~gpP 80 (327)
T 2c7p_A 74 ILCAGFP 80 (327)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 8886644
No 338
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.45 E-value=0.037 Score=48.38 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=48.3
Q ss_pred CEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEE
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASI 136 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dv 136 (268)
++|||+=||.|++..-+ ...|...+.++|+++.+.. .++. + -.-.++++|+.++... ...++|+
T Consensus 1 mkvidLFsG~GG~~~G~-~~aG~~~v~a~e~d~~a~~------ty~~---N-----~~~~~~~~DI~~i~~~-~~~~~D~ 64 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGF-QKAGFRIICANEYDKSIWK------TYES---N-----HSAKLIKGDISKISSD-EFPKCDG 64 (331)
T ss_dssp CEEEEESCTTCHHHHHH-HHTTCEEEEEEECCTTTHH------HHHH---H-----CCSEEEESCGGGCCGG-GSCCCSE
T ss_pred CeEEEeCcCccHHHHHH-HHCCCEEEEEEeCCHHHHH------HHHH---H-----CCCCcccCChhhCCHh-hCCcccE
Confidence 47999999999998765 4568887899999997332 2221 1 1236789999987643 3346788
Q ss_pred EEEec
Q psy17227 137 VFVNN 141 (268)
Q Consensus 137 v~~~~ 141 (268)
++...
T Consensus 65 l~ggp 69 (331)
T 3ubt_Y 65 IIGGP 69 (331)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 77543
No 339
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.40 E-value=0.031 Score=49.05 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=62.9
Q ss_pred HHHHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+....++++|++||-.|| |.|..+..+++..|+. |++++.++. +.+. +++ ..|. ...+ |..+
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~-V~~~~~~~~--~~~~----~~~---~~g~---~~~~---d~~~ 210 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY-VVGSAGSKE--KVDL----LKT---KFGF---DDAF---NYKE 210 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HHH---TSCC---SEEE---ETTS
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HHH---HcCC---ceEE---ecCC
Confidence 335678999999999997 6788888888888885 999999864 2211 110 1221 1112 3322
Q ss_pred ---Cc--cccc-ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 ---EE--HREK-ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 ---l~--~~~~-~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. .... ...+|+++-+.- ...+....+.|+|||+++..
T Consensus 211 ~~~~~~~~~~~~~~~~d~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 211 ESDLTAALKRCFPNGIDIYFENVG------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CSCSHHHHHHHCTTCEEEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEEECCC------HHHHHHHHHHHhcCCEEEEE
Confidence 11 0000 013677765422 14678888999999999975
No 340
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.33 E-value=0.029 Score=49.42 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=62.3
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||=.|+ |.|.++..+|+..|+. |++++.++.....++ +.|. . .++..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~-Vi~~~~~~~~~~~~~----------~~ga---~-~v~~~~-~~~~ 216 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK-VIAVVNRTAATEFVK----------SVGA---D-IVLPLE-EGWA 216 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHH----------HHTC---S-EEEESS-TTHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH----------hcCC---c-EEecCc-hhHH
Confidence 5678899999999997 5688899999988985 999999876222211 2232 1 122222 2221
Q ss_pred --ccc--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 --HRE--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 --~~~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+ +...+|+++-..- . ..+....+.|++||+++..
T Consensus 217 ~~v~~~~~~~g~Dvvid~~g---~---~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 217 KAVREATGGAGVDMVVDPIG---G---PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHHHHHTTTSCEEEEEESCC--------CHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCCCceEEEECCc---h---hHHHHHHHhhcCCCEEEEE
Confidence 000 0113677764322 1 2567788999999999975
No 341
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.22 E-value=0.012 Score=64.92 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhC-----CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC-cc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATG-----CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE-EH 127 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~-----~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l-~~ 127 (268)
.+..+||+||.|+|..+..+....+ ....+-.|+|+..... +++.++. -+++.-.-|..+. ++
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~--a~~~f~~---------~di~~~~~d~~~~~~~ 1307 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEA--AQAKLEQ---------LHVTQGQWDPANPAPG 1307 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTT--TTTTHHH---------HTEEEECCCSSCCCC-
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHH--HHHHhhh---------cccccccccccccccC
Confidence 4678999999999988766555443 2346888999763222 2232321 1233322233332 22
Q ss_pred cccccceEEEEEeccccC-cCHHHHHHHHHhcCCCCcEEEEeC
Q psy17227 128 REKITQASIVFVNNFAFG-PTVDHALKERFQDLKDGARIVSSK 169 (268)
Q Consensus 128 ~~~~~d~dvv~~~~~~~~-~~~~~~l~e~~r~LkpGG~~i~~~ 169 (268)
... .+|+|+..+.+|. ++....+.++.+.|||||.+++.+
T Consensus 1308 ~~~--~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1308 SLG--KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ------CCEEEEECC--------------------CCEEEEEE
T ss_pred CCC--ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 222 3567777766664 568888999999999999988753
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.12 E-value=0.042 Score=48.64 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=61.3
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||-.|+ |.|..+..+++..|+. |++++.++. ..+ .++ ..|. .. .+ |..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~----~~~----~~ga---~~-~~--d~~~~~ 226 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLK-ILGTAGTEE--GQK----IVL----QNGA---HE-VF--NHREVN 226 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHH--HHH----HHH----HTTC---SE-EE--ETTSTT
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChh--HHH----HHH----HcCC---CE-EE--eCCCch
Confidence 4568899999999997 6688888888888885 999999874 221 111 2231 11 12 332221
Q ss_pred cccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+. ...+|+++-+.- ...+...++.|+|||+++..
T Consensus 227 ~~~~~~~~~~~~~~D~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 227 YIDKIKKYVGEKGIDIIIEMLA------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHHHHHHHHCTTCEEEEEESCH------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCcEEEEECCC------hHHHHHHHHhccCCCEEEEE
Confidence 1110 113677765322 23577788999999999975
No 343
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.11 E-value=0.053 Score=47.63 Aligned_cols=97 Identities=22% Similarity=0.165 Sum_probs=60.8
Q ss_pred CCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--cc
Q psy17227 52 NATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HR 128 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~ 128 (268)
.+++|++||=+|+|. |.++..+|+..|..+|+++|.++. +.+ .+ +..|.. .++..+- ++. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~--~~~----~~----~~lGa~----~~i~~~~-~~~~~v~ 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDD--RLA----LA----REVGAD----AAVKSGA-GAADAIR 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHH--HHH----HH----HHTTCS----EEEECST-THHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH--HHH----HH----HHcCCC----EEEcCCC-cHHHHHH
Confidence 789999999999976 788888898885556999999975 221 11 123321 1222111 211 00
Q ss_pred c--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 129 E--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 129 ~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ +...+|+++-. . .-...+....+.|+|||+++..
T Consensus 233 ~~t~g~g~d~v~d~-~----G~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 ELTGGQGATAVFDF-V----GAQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHHGGGCEEEEEES-S----CCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEC-C----CCHHHHHHHHHHHhcCCEEEEE
Confidence 0 01146777642 1 1234678889999999999986
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.09 E-value=0.043 Score=48.37 Aligned_cols=99 Identities=16% Similarity=0.151 Sum_probs=61.4
Q ss_pred HHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 48 IDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 48 l~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+...++ +|++||-+|+|. |..+..+|+..|+.+|++++.++. +.+. ++ ..|. . .++ |..+..
T Consensus 161 l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~--~~~~----~~----~~Ga---~-~~~--~~~~~~ 223 (348)
T 2d8a_A 161 VLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDF--RREL----AK----KVGA---D-YVI--NPFEED 223 (348)
T ss_dssp HTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH--HHHH----HH----HHTC---S-EEE--CTTTSC
T ss_pred HHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH--HHHH----HH----HhCC---C-EEE--CCCCcC
Confidence 356678 999999999964 777888888889844999999874 2221 11 2232 1 122 222211
Q ss_pred ccc------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HRE------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+ +...+|+++-..- ....+....+.|++||+++..
T Consensus 224 ~~~~v~~~~~g~g~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 224 VVKEVMDITDGNGVDVFLEFSG-----APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp HHHHHHHHTTTSCEEEEEECSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCCCEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 111 0113677764321 135678888999999999975
No 345
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.04 E-value=0.18 Score=44.02 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=63.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 46 RMIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 46 ~ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
..+...++.+|++||=.|+|. |.++..+|+..|+..++++|.++. +++ .+ ++.|. -..+..+-.+
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~--k~~----~a----~~lGa----~~~i~~~~~~ 216 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSE--KLA----LA----KSFGA----MQTFNSSEMS 216 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH--HHH----HH----HHTTC----SEEEETTTSC
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHH--HHH----HH----HHcCC----eEEEeCCCCC
Confidence 456677899999999999975 556777888889887899999975 221 11 23342 1222222112
Q ss_pred Cc-----ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE-----HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~-----~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ ..+. .-+|+++-. . .....+....+.|++||++++.
T Consensus 217 ~~~~~~~~~~~-~g~d~v~d~-~----G~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 217 APQMQSVLREL-RFNQLILET-A----GVPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HHHHHHHHGGG-CSSEEEEEC-S----CSHHHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHhhccc-CCccccccc-c----cccchhhhhhheecCCeEEEEE
Confidence 11 0111 124555532 1 1245677888999999999986
No 346
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.03 E-value=0.036 Score=47.83 Aligned_cols=94 Identities=18% Similarity=0.214 Sum_probs=59.8
Q ss_pred HcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Cc
Q psy17227 50 QINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EE 126 (268)
Q Consensus 50 ~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~ 126 (268)
.. +++|++||-+|+ |.|..+..+|+..|+. |++++.++.....++ ..|. . .++ |..+ ..
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~-Vi~~~~~~~~~~~~~----------~~ga---~-~~~--~~~~~~~ 182 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLR-VLAAASRPEKLALPL----------ALGA---E-EAA--TYAEVPE 182 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEEEESSGGGSHHHH----------HTTC---S-EEE--EGGGHHH
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH----------hcCC---C-EEE--ECCcchh
Confidence 44 889999999998 5688888899988985 999999875322221 1231 1 111 2221 11
Q ss_pred ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+....+|+++- .-. ..+....+.|+|||+++..
T Consensus 183 ~~~~~~~~d~vid-~g~------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 183 RAKAWGGLDLVLE-VRG------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp HHHHTTSEEEEEE-CSC------TTHHHHHTTEEEEEEEEEC
T ss_pred HHHHhcCceEEEE-CCH------HHHHHHHHhhccCCEEEEE
Confidence 1111124677764 321 3567888999999999875
No 347
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.99 E-value=0.0024 Score=55.18 Aligned_cols=100 Identities=5% Similarity=-0.094 Sum_probs=66.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Cc-ccccccc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EE-HREKITQ 133 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~-~~~~~~d 133 (268)
+..+||+=+|+|.+++.+.. +..+++.+|.++. .++..+++++ ...+++++++|... +. +......
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~--a~~~L~~Nl~--------~~~~~~V~~~D~~~~L~~l~~~~~~ 159 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPT--EYNFLLKLPH--------FNKKVYVNHTDGVSKLNALLPPPEK 159 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHH--HHHHHTTSCC--------TTSCEEEECSCHHHHHHHHCSCTTS
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHH--HHHHHHHHhC--------cCCcEEEEeCcHHHHHHHhcCCCCC
Confidence 45699999999999998665 4467999999985 2222222221 13579999999754 22 1111124
Q ss_pred eEEEEEeccccC-cCHHHHHHHHHh--cCCCCcEEEE
Q psy17227 134 ASIVFVNNFAFG-PTVDHALKERFQ--DLKDGARIVS 167 (268)
Q Consensus 134 ~dvv~~~~~~~~-~~~~~~l~e~~r--~LkpGG~~i~ 167 (268)
+|+||+...+-. .+..+.+..+.+ .+.|+|++++
T Consensus 160 fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 160 RGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 789999876553 455666666654 6788999887
No 348
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.94 E-value=0.028 Score=50.29 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=61.7
Q ss_pred HHHHcC-CCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC-
Q psy17227 47 MIDQIN-ATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL- 123 (268)
Q Consensus 47 ll~~l~-~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~- 123 (268)
.+..++ +++|++||-+|||. |.++..+|+..|..+|++++.++. +.+. ++ ..|. . .++..+..
T Consensus 186 al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~----~~----~lGa---~-~vi~~~~~~ 251 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN--RLKL----AE----EIGA---D-LTLNRRETS 251 (380)
T ss_dssp HHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH--HHHH----HH----HTTC---S-EEEETTTSC
T ss_pred HHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH--HHHH----HH----HcCC---c-EEEeccccC
Confidence 345678 89999999999774 777888888888545999999874 2221 11 2332 1 12221100
Q ss_pred CCcccc------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHRE------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..+.+ +...+|+++-..- ....+...++.|+|||+++..
T Consensus 252 ~~~~~~~v~~~~~g~g~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 252 VEERRKAIMDITHGRGADFILEATG-----DSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHHHHHHHTTTSCEEEEEECSS-----CTTHHHHHHHHEEEEEEEEEC
T ss_pred cchHHHHHHHHhCCCCCcEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 111100 0113677764321 123567788999999999975
No 349
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.92 E-value=0.086 Score=47.49 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=33.7
Q ss_pred CCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 52 NATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
++++|++||=+|+|. |.+++.+|+..|+.+|+++|.++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 249 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEV 249 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 688999999999875 777888888889966999999974
No 350
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.91 E-value=0.11 Score=39.50 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=54.3
Q ss_pred CCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--c
Q psy17227 56 DDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE--K 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~--~ 130 (268)
.++|+=+|||. ++..+|+ ..|.. |+++|.+++ .+.. ++ ...+.++.||..+...-. +
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~-v~vid~~~~--~~~~----~~---------~~g~~~i~gd~~~~~~l~~a~ 68 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIP-LVVIETSRT--RVDE----LR---------ERGVRAVLGNAANEEIMQLAH 68 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCC-EEEEESCHH--HHHH----HH---------HTTCEEEESCTTSHHHHHHTT
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCC-EEEEECCHH--HHHH----HH---------HcCCCEEECCCCCHHHHHhcC
Confidence 45688888854 4444443 45666 999999985 2211 11 125678999998754211 2
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..++|++++.. ..+.....+....+.+.|+..++..
T Consensus 69 i~~ad~vi~~~--~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 69 LECAKWLILTI--PNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp GGGCSEEEECC--SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cccCCEEEEEC--CChHHHHHHHHHHHHHCCCCeEEEE
Confidence 34566666521 1122233344566778888887763
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.90 E-value=0.075 Score=47.13 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=62.7
Q ss_pred HHHHcCCCCCCEEEEEc--CCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLG--SGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiG--CG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+....++++|++||-+| .|.|..+..+|+..|+. |++++.++. +.+. ++ ..|. . .++..+-.+
T Consensus 155 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~~Ga---~-~~~~~~~~~ 219 (362)
T 2c0c_A 155 LKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH-VIGTCSSDE--KSAF----LK----SLGC---D-RPINYKTEP 219 (362)
T ss_dssp HHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HTTC---S-EEEETTTSC
T ss_pred HHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEECCHH--HHHH----HH----HcCC---c-EEEecCChh
Confidence 33456889999999999 56788899999988985 999999864 2211 11 2232 1 122211111
Q ss_pred Cc--ccc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE--HRE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~--~~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. ... ....+|+++-..- . ..+....+.|++||+++..
T Consensus 220 ~~~~~~~~~~~g~D~vid~~g---~---~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 220 VGTVLKQEYPEGVDVVYESVG---G---AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HHHHHHHHCTTCEEEEEECSC---T---HHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECCC---H---HHHHHHHHHHhcCCEEEEE
Confidence 11 000 0013677765322 1 4678888999999999975
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.86 E-value=0.035 Score=48.43 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=61.2
Q ss_pred HHcCCCCCCEEEEEc--CCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLG--SGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiG--CG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||=+| .|.|..+..+|+..|+. |++++.++. +.+. ++ ..|. .. .+ |..+..
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~~Ga---~~-~~--~~~~~~ 196 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSPE--KAAH----AK----ALGA---WE-TI--DYSHED 196 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEEEESSHH--HHHH----HH----HHTC---SE-EE--ETTTSC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----HcCC---CE-EE--eCCCcc
Confidence 445789999999999 35688888899988985 999999874 2221 11 2232 11 22 222211
Q ss_pred cccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+. ...+|+++-+.- . ..+....+.|+|||+++..
T Consensus 197 ~~~~~~~~~~~~g~Dvvid~~g---~---~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 197 VAKRVLELTDGKKCPVVYDGVG---Q---DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHHHHHHHTTTCCEEEEEESSC---G---GGHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCceEEEECCC---h---HHHHHHHHHhcCCCEEEEE
Confidence 1110 124677765322 1 3567888999999999986
No 353
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.82 E-value=0.12 Score=45.20 Aligned_cols=101 Identities=16% Similarity=0.082 Sum_probs=60.4
Q ss_pred HHHHcCCCCCCEEEEEcCCCC-HHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVG-QVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G-~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||=+|+|.+ .++..+|+..+..+|+++|.+++ +.+. + +..|. .. ++ |..+.
T Consensus 155 ~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~--r~~~----~----~~~Ga---~~-~i--~~~~~ 218 (348)
T 4eez_A 155 AIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD--KLNL----A----KKIGA---DV-TI--NSGDV 218 (348)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH--HHHH----H----HHTTC---SE-EE--EC-CC
T ss_pred eecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH--Hhhh----h----hhcCC---eE-EE--eCCCC
Confidence 456678999999999999874 45666666665556999999974 2211 1 12332 11 22 22221
Q ss_pred cccc------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHRE------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++.+ +...+|+++... .-...+....+.|++||++++.
T Consensus 219 ~~~~~v~~~t~g~g~d~~~~~~-----~~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 219 NPVDEIKKITGGLGVQSAIVCA-----VARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CHHHHHHHHTTSSCEEEEEECC-----SCHHHHHHHHHTEEEEEEEEEC
T ss_pred CHHHHhhhhcCCCCceEEEEec-----cCcchhheeheeecCCceEEEE
Confidence 1111 112344554321 2245678888999999999875
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.72 E-value=0.065 Score=47.18 Aligned_cols=100 Identities=18% Similarity=0.278 Sum_probs=62.8
Q ss_pred HHHHcCCCCCCEEEEEcCC--CCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 47 MIDQINATPDDVFVDLGSG--VGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG--~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
.+...+++++++||-+|+| .|..+..+++.. |+. |+++|.++. ..+. ++ ..|. ...+ |..
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~-Vi~~~~~~~--~~~~----~~----~~g~---~~~~---~~~ 224 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREE--AVEA----AK----RAGA---DYVI---NAS 224 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCE-EEEEESSHH--HHHH----HH----HHTC---SEEE---ETT
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCe-EEEEcCCHH--HHHH----HH----HhCC---CEEe---cCC
Confidence 4456789999999999998 677788888888 886 999999874 2221 11 1231 1112 222
Q ss_pred CCcc----cccc--cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEH----REKI--TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~----~~~~--~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..+ .... ..+|+++-+.- ....+....+.|+|||+++..
T Consensus 225 ~~~~~~~~~~~~~~~~~d~vi~~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 225 MQDPLAEIRRITESKGVDAVIDLNN-----SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TSCHHHHHHHHTTTSCEEEEEESCC-----CHHHHTTGGGGEEEEEEEEEC
T ss_pred CccHHHHHHHHhcCCCceEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 2111 0101 14677764322 134677888999999999975
No 355
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.68 E-value=0.039 Score=48.10 Aligned_cols=96 Identities=21% Similarity=0.219 Sum_probs=60.9
Q ss_pred HcCCCCCCEEEEEc--CCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc
Q psy17227 50 QINATPDDVFVDLG--SGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH 127 (268)
Q Consensus 50 ~l~~~~~~~vLDiG--CG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~ 127 (268)
..++++|++||-.| +|.|..+..+++..|+. |++++.++. ..+. ++ ..|. .. .+ |..+..+
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-V~~~~~~~~--~~~~----~~----~~g~---~~-~~--~~~~~~~ 197 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQ--KAQS----AL----KAGA---WQ-VI--NYREEDL 197 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEEESSHH--HHHH----HH----HHTC---SE-EE--ETTTSCH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHH--HHHH----HH----HcCC---CE-EE--ECCCccH
Confidence 56889999999999 56788888888888985 999999864 2221 11 1221 11 12 3322211
Q ss_pred ccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 128 REK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 128 ~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+. ...+|+++-+.- ...+...++.|++||+++..
T Consensus 198 ~~~~~~~~~~~~~D~vi~~~g------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 198 VERLKEITGGKKVRVVYDSVG------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHHHHHTTTCCEEEEEECSC------GGGHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhCCCCceEEEECCc------hHHHHHHHHHhcCCCEEEEE
Confidence 110 113677765432 24577888999999999975
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.49 E-value=0.041 Score=48.42 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=58.2
Q ss_pred CCCCCCEEEEEcCCC-CHHHHHHHHHh--CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Cc-
Q psy17227 52 NATPDDVFVDLGSGV-GQVVLQVAAAT--GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EE- 126 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~-G~~~~~la~~~--~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~- 126 (268)
++ +|++||-+|+|. |.++..+|+.. |+. |++++.|+. +.+. ++ ..|.. . ++ |..+ ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~-Vi~~~~~~~--~~~~----~~----~lGa~--~--vi--~~~~~~~~ 229 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNIT-IVGISRSKK--HRDF----AL----ELGAD--Y--VS--EMKDAESL 229 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCE-EEEECSCHH--HHHH----HH----HHTCS--E--EE--CHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCE-EEEEeCCHH--HHHH----HH----HhCCC--E--Ee--ccccchHH
Confidence 78 999999999975 77788889888 886 999999874 2211 11 23321 1 11 1111 00
Q ss_pred ---ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 ---HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ---~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+. ..+|+++-..- ....+....+.|+|||+++..
T Consensus 230 ~~~~~~g-~g~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 230 INKLTDG-LGASIAIDLVG-----TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp HHHHHTT-CCEEEEEESSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHhhcC-CCccEEEECCC-----ChHHHHHHHHHhhcCCEEEEe
Confidence 1111 13677764321 134678888999999999975
No 357
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.44 E-value=0.099 Score=46.11 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=63.5
Q ss_pred HHHHcCCCCC--CEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 47 MIDQINATPD--DVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 47 ll~~l~~~~~--~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
+....++++| ++||-.|+ |.|..+..+++..|+.+|++++.++. ..+. +.+ ..|. .. .+ |.
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~--~~~~----~~~---~~g~---~~-~~--d~ 214 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE--KCIL----LTS---ELGF---DA-AI--NY 214 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH--HHHH----HHH---TSCC---SE-EE--ET
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH--HHHH----HHH---HcCC---ce-EE--ec
Confidence 4467789999 99999998 66778888888888845999999863 2211 111 1221 11 11 33
Q ss_pred CCCccccc----c-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREK----I-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~----~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+..+.+. . ..+|+++-+.- ...+....+.|++||+++..
T Consensus 215 ~~~~~~~~~~~~~~~~~d~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 215 KKDNVAEQLRESCPAGVDVYFDNVG------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp TTSCHHHHHHHHCTTCEEEEEESCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred CchHHHHHHHHhcCCCCCEEEECCC------HHHHHHHHHHhccCcEEEEE
Confidence 32211110 0 13677765432 25678888999999999975
No 358
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.41 E-value=0.04 Score=48.71 Aligned_cols=97 Identities=14% Similarity=0.176 Sum_probs=61.0
Q ss_pred HHcCCCCCCEEEEEc--CCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLG--SGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiG--CG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||=+| .|.|..+..+|+..|+. |++++.++. +.+. ++ +.|. .. .+ |..+..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~lGa---~~-~~--~~~~~~ 223 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAE-VYATAGSTG--KCEA----CE----RLGA---KR-GI--NYRSED 223 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HHTC---SE-EE--ETTTSC
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE-EEEEeCCHH--HHHH----HH----hcCC---CE-EE--eCCchH
Confidence 556889999999995 35688888999988986 999999875 2221 11 2232 11 22 222221
Q ss_pred cccc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+. ...+|+++-+.- . ..+....+.|+|||+++..
T Consensus 224 ~~~~~~~~~~~g~Dvvid~~g---~---~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 224 FAAVIKAETGQGVDIILDMIG---A---AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHHHHHHHHSSCEEEEEESCC---G---GGHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHhCCCceEEEECCC---H---HHHHHHHHHhccCCEEEEE
Confidence 1111 113677764322 1 2567788999999999975
No 359
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.37 E-value=0.038 Score=48.58 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=60.7
Q ss_pred cCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 51 INATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 51 l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
.+++++++||-+|+ |.|..+..+++..|+. |++++.++. +.+. ++ ..|. .. ++ |..+..+.
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~-Vi~~~~~~~--~~~~----~~----~~ga---~~-~~--d~~~~~~~ 224 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR-VIATAGSED--KLRR----AK----ALGA---DE-TV--NYTHPDWP 224 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HHTC---SE-EE--ETTSTTHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----hcCC---CE-EE--cCCcccHH
Confidence 47889999999998 6888899999988885 999999874 2221 11 1232 11 12 33322111
Q ss_pred c------cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 129 E------KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 129 ~------~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ +...+|+++-+.- . ..+....+.|++||+++..
T Consensus 225 ~~~~~~~~~~~~d~vi~~~g---~---~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 225 KEVRRLTGGKGADKVVDHTG---A---LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHHHHHTTTTCEEEEEESSC---S---SSHHHHHHHEEEEEEEEES
T ss_pred HHHHHHhCCCCceEEEECCC---H---HHHHHHHHhhccCCEEEEE
Confidence 1 0124677775432 1 2467778899999999975
No 360
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.36 E-value=0.07 Score=47.34 Aligned_cols=94 Identities=10% Similarity=0.087 Sum_probs=58.3
Q ss_pred HcCCC--C-------CCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCC---ChhHHHHHHHHHHHHHHHhccccccEE
Q psy17227 50 QINAT--P-------DDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKAD---LPAKYAEMHTVFKRWMQWYGKRHGEFR 116 (268)
Q Consensus 50 ~l~~~--~-------~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~i~ 116 (268)
..+++ + |++||-+|+|. |.++..+|+..|+ +|++++.++ . ..+ .++ ..|. .
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~--~~~----~~~----~~ga-----~ 229 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEV--EQT----VIE----ETKT-----N 229 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHH--HHH----HHH----HHTC-----E
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchH--HHH----HHH----HhCC-----c
Confidence 66788 8 99999999853 6667778888898 499999987 4 111 111 2232 2
Q ss_pred EEEcCCCCCcccccc----cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 117 LVKGDFLTEEHREKI----TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 117 ~~~gD~~~l~~~~~~----~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
.+ | .+ .+.+.. ..+|+++-..- . + ..+ ....+.|+|||+++..
T Consensus 230 ~v--~-~~-~~~~~~~~~~~~~d~vid~~g-~-~---~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 230 YY--N-SS-NGYDKLKDSVGKFDVIIDATG-A-D---VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EE--E-CT-TCSHHHHHHHCCEEEEEECCC-C-C---THHHHHHGGGEEEEEEEEEC
T ss_pred ee--c-hH-HHHHHHHHhCCCCCEEEECCC-C-h---HHHHHHHHHHHhcCCEEEEE
Confidence 22 2 22 211110 23677765322 1 1 245 7888999999999975
No 361
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.12 E-value=0.097 Score=45.72 Aligned_cols=98 Identities=19% Similarity=0.159 Sum_probs=60.4
Q ss_pred HcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-
Q psy17227 50 QINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE- 126 (268)
Q Consensus 50 ~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~- 126 (268)
..++++|++||=+|+ |.|..+..+|+..|+. |++++.++. +++. ++ ..|. . .++..+-.++.
T Consensus 143 ~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~~ga---~-~~~~~~~~~~~~ 207 (334)
T 3qwb_A 143 AYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAH-TIAVASTDE--KLKI----AK----EYGA---E-YLINASKEDILR 207 (334)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HTTC---S-EEEETTTSCHHH
T ss_pred hccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----HcCC---c-EEEeCCCchHHH
Confidence 347899999999994 6688888888888985 999999864 2221 11 2331 1 12221111211
Q ss_pred -ccc--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 -HRE--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 -~~~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+ +...+|+++-+.- ...+....+.|+|||+++..
T Consensus 208 ~~~~~~~~~g~D~vid~~g------~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 208 QVLKFTNGKGVDASFDSVG------KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHHHHTTTSCEEEEEECCG------GGGHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhCCCCceEEEECCC------hHHHHHHHHHhccCCEEEEE
Confidence 000 0123677765322 14577788999999999986
No 362
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.10 E-value=0.05 Score=48.10 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=60.3
Q ss_pred HHcCCCCCCEEEEEc--CCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLG--SGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiG--CG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||-.| .|.|..+..+++..|+. |++++.++. +++. ++ ..|. .. .+ |..+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-Vi~~~~~~~--~~~~----~~----~~g~---~~-~~--~~~~~~ 218 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAI-PLVTAGSQK--KLQM----AE----KLGA---AA-GF--NYKKED 218 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH----HH----HHTC---SE-EE--ETTTSC
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHH--HHHH----HH----HcCC---cE-EE--ecCChH
Confidence 456889999999999 36788888888888885 999999874 2221 11 1232 11 11 222221
Q ss_pred cccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+. ...+|+++-+.- . ..+....+.|++||+++..
T Consensus 219 ~~~~~~~~~~~~~~d~vi~~~G---~---~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 219 FSEATLKFTKGAGVNLILDCIG---G---SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp HHHHHHHHTTTSCEEEEEESSC---G---GGHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCceEEEECCC---c---hHHHHHHHhccCCCEEEEE
Confidence 1110 113677765432 1 2467778999999999975
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.09 E-value=0.096 Score=45.74 Aligned_cols=97 Identities=14% Similarity=0.213 Sum_probs=61.5
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...+++++++||-.|+ |.|..+..+++..|+. |++++.++. ..+. ++ ..|. .. .+ |..+..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-Vi~~~~~~~--~~~~----~~----~~g~---~~-~~--d~~~~~ 201 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT-VIGTVSTEE--KAET----AR----KLGC---HH-TI--NYSTQD 201 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HHTC---SE-EE--ETTTSC
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----HcCC---CE-EE--ECCCHH
Confidence 3568899999999995 7788888888888885 999999864 2211 11 1231 11 11 333221
Q ss_pred cccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 HREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 ~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.+. ...+|+++-+.-. ..+....+.|+|||+++..
T Consensus 202 ~~~~i~~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 202 FAEVVREITGGKGVDVVYDSIGK------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHHHHHHHTTCCEEEEEECSCT------TTHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCCeEEEECCcH------HHHHHHHHhhccCCEEEEE
Confidence 1110 1136777754321 4577888999999999875
No 364
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.04 E-value=0.058 Score=46.98 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=59.1
Q ss_pred HHcCCCCCC-EEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC-CC
Q psy17227 49 DQINATPDD-VFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF-LT 124 (268)
Q Consensus 49 ~~l~~~~~~-~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~-~~ 124 (268)
...++++++ +||=+|+ |.|.++..+|+..|+. |++++.++.-...++ ..|.. .+ +-..+. .+
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~----------~lGa~--~~-i~~~~~~~~ 207 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLR----------VLGAK--EV-LAREDVMAE 207 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHH----------HTTCS--EE-EECC-----
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHH----------HcCCc--EE-EecCCcHHH
Confidence 446788886 8999997 6788899999988987 999999875222221 23321 11 111111 00
Q ss_pred -Cc-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 -EE-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 -l~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.. ... ..+|+++-..- . ..+....+.|++||+++..
T Consensus 208 ~~~~~~~--~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 208 RIRPLDK--QRWAAAVDPVG---G---RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ----CCS--CCEEEEEECST---T---TTHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcC--CcccEEEECCc---H---HHHHHHHHhhccCCEEEEE
Confidence 00 111 13677664321 1 2467788999999999975
No 365
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.00 E-value=0.19 Score=43.65 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=60.8
Q ss_pred HHHHcCCCCCCEEEEEc-CC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLG-SG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiG-CG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+...++++|++||=+| +| .|.++..+|+..|+. |++++ ++. ..+ .+ ++.|.. .++ |..+
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~-vi~~~-~~~--~~~----~~----~~lGa~----~~i--~~~~ 205 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT-VITTA-SKR--NHA----FL----KALGAE----QCI--NYHE 205 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEE-CHH--HHH----HH----HHHTCS----EEE--ETTT
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEEe-ccc--hHH----HH----HHcCCC----EEE--eCCC
Confidence 34778999999999997 44 588899999988985 88887 432 111 11 223421 122 2322
Q ss_pred Cc-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+ +.+....+|+++-..- ...+...++.|+|||+++..
T Consensus 206 ~~~~~~~~~g~D~v~d~~g------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 206 EDFLLAISTPVDAVIDLVG------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCHHHHCCSCEEEEEESSC------HHHHHHHGGGEEEEEEEEEC
T ss_pred cchhhhhccCCCEEEECCC------cHHHHHHHHhccCCCEEEEe
Confidence 22 2222234677764211 23347788999999999975
No 366
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.81 E-value=0.13 Score=44.53 Aligned_cols=98 Identities=17% Similarity=0.276 Sum_probs=59.4
Q ss_pred HHcCCCCCC-EEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 49 DQINATPDD-VFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 49 ~~l~~~~~~-~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
..+++++++ +||=.|+ |.|.++..+|+..|+. |++++.++.-...++ +.|. ..-+-..+....
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~-Vi~~~~~~~~~~~~~----------~lGa---~~vi~~~~~~~~ 204 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ-VAAVSGRESTHGYLK----------SLGA---NRILSRDEFAES 204 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHH----------HHTC---SEEEEGGGSSCC
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH----------hcCC---CEEEecCCHHHH
Confidence 455676632 4999997 6789999999999995 999999986222221 2332 111211121110
Q ss_pred c-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 E-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. ... ..+|+++-. . . ...+....+.|+|||+++..
T Consensus 205 ~~~~~--~~~d~v~d~-~--g---~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 205 RPLEK--QLWAGAIDT-V--G---DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CSSCC--CCEEEEEES-S--C---HHHHHHHHHTEEEEEEEEEC
T ss_pred HhhcC--CCccEEEEC-C--C---cHHHHHHHHHHhcCCEEEEE
Confidence 0 011 135666532 2 1 23788889999999999986
No 367
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.79 E-value=0.058 Score=47.38 Aligned_cols=96 Identities=17% Similarity=0.122 Sum_probs=58.8
Q ss_pred HcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 50 QINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 50 ~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
..++ +|++||-+|+|. |.++..+|+..|+.+|++++.++. +++. ++ . . . . .++ |..+..+.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~--~~~~----~~----~--l-a-~-~v~--~~~~~~~~ 221 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPY--RLAF----AR----P--Y-A-D-RLV--NPLEEDLL 221 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH--HHGG----GT----T--T-C-S-EEE--CTTTSCHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH--HHHH----HH----H--h-H-H-hcc--CcCccCHH
Confidence 6678 999999999864 777888888889834999999864 1111 11 0 1 0 1 111 22221111
Q ss_pred cc-----ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 129 EK-----ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 129 ~~-----~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. ...+|+++-..- ....+....+.|+|||+++..
T Consensus 222 ~~~~~~~~~g~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 222 EVVRRVTGSGVEVLLEFSG-----NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HHHHHHHSSCEEEEEECSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhcCCCCCEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 10 113677764321 135678888999999999975
No 368
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.73 E-value=0.1 Score=45.31 Aligned_cols=75 Identities=15% Similarity=0.099 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHHhCCcE--EEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-
Q psy17227 53 ATPDDVFVDLGSGVGQVVLQVAAATGCKI--CWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE- 129 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~--v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~- 129 (268)
.+.+.+|+|+=||.|++..-+. ..|... |.++|+++.+. +.++. + .+...++++|+.++...+
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~-~aG~~~~~v~a~E~d~~a~------~ty~~---N----~~~~~~~~~DI~~i~~~~i 78 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLK-DLGIQVDRYIASEVCEDSI------TVGMV---R----HQGKIMYVGDVRSVTQKHI 78 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHH-HTTBCEEEEEEECCCHHHH------HHHHH---H----TTTCEEEECCGGGCCHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHHH-HCCCccceEEEEECCHHHH------HHHHH---h----CCCCceeCCChHHccHHHh
Confidence 4456789999999999997654 467764 69999998522 22221 1 234568899999875321
Q ss_pred -cccceEEEEEec
Q psy17227 130 -KITQASIVFVNN 141 (268)
Q Consensus 130 -~~~d~dvv~~~~ 141 (268)
...++|+++...
T Consensus 79 ~~~~~~Dll~ggp 91 (295)
T 2qrv_A 79 QEWGPFDLVIGGS 91 (295)
T ss_dssp HHTCCCSEEEECC
T ss_pred cccCCcCEEEecC
Confidence 112567887543
No 369
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.71 E-value=0.085 Score=45.97 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=60.3
Q ss_pred HHcCCCCCC-EEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC--C
Q psy17227 49 DQINATPDD-VFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF--L 123 (268)
Q Consensus 49 ~~l~~~~~~-~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~--~ 123 (268)
...++++|+ +||=+|| |.|.++..+|+..|+. |++++.++.-...++ ..|.. .+ +-..|. .
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~----------~lGa~--~v-~~~~~~~~~ 208 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYD-VVASTGNREAADYLK----------QLGAS--EV-ISREDVYDG 208 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCC-EEEEESSSSTHHHHH----------HHTCS--EE-EEHHHHCSS
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH----------HcCCc--EE-EECCCchHH
Confidence 345788886 8999997 6788888999988987 999999976222221 12321 11 111111 0
Q ss_pred CCc-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
... ... ..+|+++-..- . ..+....+.|+|||+++..
T Consensus 209 ~~~~~~~--~~~d~vid~~g----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 209 TLKALSK--QQWQGAVDPVG----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCCSSCC--CCEEEEEESCC----T--HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHhhc--CCccEEEECCc----H--HHHHHHHHhhcCCCEEEEE
Confidence 000 111 13677664321 1 3678888999999999975
No 370
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.50 E-value=0.07 Score=47.11 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=46.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHhCC--cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-ccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATGC--KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK-ITQ 133 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~~--~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~-~~d 133 (268)
.+|+|+-||.|++..-+.. .|. ..+.++|+++. +.+.++. + .+...++++|+.++...+- ..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~-aG~~~~~v~a~e~d~~------a~~ty~~---N----~~~~~~~~~DI~~~~~~~~~~~~ 69 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKE-SGLDGEIVAAVDINTV------ANSVYKH---N----FPETNLLNRNIQQLTPQVIKKWN 69 (333)
T ss_dssp EEEEEETCTTTHHHHHHHH-HTCSEEEEEEECCCHH------HHHHHHH---H----CTTSCEECCCGGGCCHHHHHHTT
T ss_pred CEEEEECcCccHHHHHHHH-cCCCceEEEEEeCCHH------HHHHHHH---h----CCCCceeccccccCCHHHhccCC
Confidence 4799999999999986644 464 55799999985 2222221 1 2344578899988753211 114
Q ss_pred eEEEEEecc
Q psy17227 134 ASIVFVNNF 142 (268)
Q Consensus 134 ~dvv~~~~~ 142 (268)
+|+++....
T Consensus 70 ~D~l~ggpP 78 (333)
T 4h0n_A 70 VDTILMSPP 78 (333)
T ss_dssp CCEEEECCC
T ss_pred CCEEEecCC
Confidence 678775433
No 371
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.37 E-value=0.24 Score=39.06 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=53.5
Q ss_pred CCEEEEEcCCCCHHHHHHH---HHh-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc-cc-
Q psy17227 56 DDVFVDLGSGVGQVVLQVA---AAT-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH-RE- 129 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la---~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~-~~- 129 (268)
+++|+=+||| .++..++ ... |.. |+++|.++. .... +++ ..+.++.+|..+... ..
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~-V~vid~~~~--~~~~----~~~---------~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKI-SLGIEIREE--AAQQ----HRS---------EGRNVISGDATDPDFWERI 100 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSC-EEEEESCHH--HHHH----HHH---------TTCCEEECCTTCHHHHHTB
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCe-EEEEECCHH--HHHH----HHH---------CCCCEEEcCCCCHHHHHhc
Confidence 5679999875 4444444 344 776 999999974 2211 111 245678889876432 11
Q ss_pred -cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 130 -KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 -~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+..++|+|++.. ..+.....+....+.+.|++.+++.
T Consensus 101 ~~~~~ad~vi~~~--~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 101 LDTGHVKLVLLAM--PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CSCCCCCEEEECC--SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCCCCCEEEEeC--CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 234567776521 1222333445566777888887764
No 372
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.30 E-value=0.33 Score=37.24 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccc-cccEEEEEcCCCCCcc-cc-
Q psy17227 54 TPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKR-HGEFRLVKGDFLTEEH-RE- 129 (268)
Q Consensus 54 ~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~i~~~~gD~~~l~~-~~- 129 (268)
.++++|+=+|||. |......+...|.. |+++|.++. .... .. ...+.++.+|..+... ..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~-V~vid~~~~--~~~~-------------~~~~~g~~~~~~d~~~~~~l~~~ 80 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHS-VVVVDKNEY--AFHR-------------LNSEFSGFTVVGDAAEFETLKEC 80 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCGG--GGGG-------------SCTTCCSEEEESCTTSHHHHHTT
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHH--HHHH-------------HHhcCCCcEEEecCCCHHHHHHc
Confidence 4678999999854 33333333345664 999999975 1111 01 1235577788765331 11
Q ss_pred cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 130 KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
....+|+|++.. -.+.....+..+.+.+.|...++..
T Consensus 81 ~~~~ad~Vi~~~--~~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 81 GMEKADMVFAFT--NDDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp TGGGCSEEEECS--SCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CcccCCEEEEEe--CCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 123567776531 2233444555666666676676653
No 373
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.19 E-value=0.089 Score=46.32 Aligned_cols=72 Identities=7% Similarity=0.111 Sum_probs=45.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHHhC--CcEE-EEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-c
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAATG--CKIC-WGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK-I 131 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~~--~~~v-~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~-~ 131 (268)
..+|+|+-||.|++..-+.. .| ...+ .++|+++.+. +.++. +.+ .. ++++|+.++...+- .
T Consensus 10 ~~~vidLFaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a~------~ty~~---N~~----~~-~~~~DI~~~~~~~i~~ 74 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYER-SSININATFIPFDINEIAN------KIYSK---NFK----EE-VQVKNLDSISIKQIES 74 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHH-SSCCCCEEEEEECCCHHHH------HHHHH---HHC----CC-CBCCCTTTCCHHHHHH
T ss_pred CCEEEEECCChhHHHHHHHH-cCCCceEEEEEEECCHHHH------HHHHH---HCC----CC-cccCChhhcCHHHhcc
Confidence 45899999999999986544 56 3556 7999998522 22221 111 12 67899998763221 0
Q ss_pred cceEEEEEecc
Q psy17227 132 TQASIVFVNNF 142 (268)
Q Consensus 132 ~d~dvv~~~~~ 142 (268)
.++|+++....
T Consensus 75 ~~~Dil~ggpP 85 (327)
T 3qv2_A 75 LNCNTWFMSPP 85 (327)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEecCC
Confidence 14678876544
No 374
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.15 E-value=0.098 Score=46.01 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=60.7
Q ss_pred HHHHcCCC------CCCEEEEE-cCC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEE
Q psy17227 47 MIDQINAT------PDDVFVDL-GSG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLV 118 (268)
Q Consensus 47 ll~~l~~~------~~~~vLDi-GCG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 118 (268)
+....+++ +|++||=+ ||| .|.++..+|+..|+. |++++.++. +.+. ++ +.|.. .++
T Consensus 136 l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~-Vi~~~~~~~--~~~~----~~----~lGa~----~vi 200 (346)
T 3fbg_A 136 LFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLR-VITTASRNE--TIEW----TK----KMGAD----IVL 200 (346)
T ss_dssp HHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEECCSHH--HHHH----HH----HHTCS----EEE
T ss_pred HHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCE-EEEEeCCHH--HHHH----HH----hcCCc----EEE
Confidence 34566777 89999999 454 477888889888985 999999864 2221 11 23321 112
Q ss_pred EcCCCC-Cc--ccc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLT-EE--HRE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~-l~--~~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|..+ +. ..+ ....+|+++-. ..-...+....+.|+|||+++..
T Consensus 201 --~~~~~~~~~~~~~~~~g~Dvv~d~-----~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 201 --NHKESLLNQFKTQGIELVDYVFCT-----FNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --CTTSCHHHHHHHHTCCCEEEEEES-----SCHHHHHHHHHHHEEEEEEEEES
T ss_pred --ECCccHHHHHHHhCCCCccEEEEC-----CCchHHHHHHHHHhccCCEEEEE
Confidence 2211 11 000 11236777642 12345578888999999999875
No 375
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.93 E-value=0.18 Score=44.70 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=60.1
Q ss_pred HHHcCCC-----CCCEEEEEc-CC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEc
Q psy17227 48 IDQINAT-----PDDVFVDLG-SG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKG 120 (268)
Q Consensus 48 l~~l~~~-----~~~~vLDiG-CG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~g 120 (268)
....+++ +|++||=+| +| .|.+++.+|+..+..+|++++.++. +.+. + ++.|.. .++
T Consensus 159 ~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~--~~~~----~----~~lGad----~vi-- 222 (363)
T 4dvj_A 159 FDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPE--TQEW----V----KSLGAH----HVI-- 222 (363)
T ss_dssp HTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHH--HHHH----H----HHTTCS----EEE--
T ss_pred HHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHH----H----HHcCCC----EEE--
Confidence 3556777 899999998 54 4888899998753335999999874 2211 1 123321 112
Q ss_pred CCCC-Cc--ccc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 121 DFLT-EE--HRE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 121 D~~~-l~--~~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|..+ +. ..+ ....+|+++-. ..-...+....+.|+|||+++..
T Consensus 223 ~~~~~~~~~v~~~~~~g~Dvvid~-----~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 223 DHSKPLAAEVAALGLGAPAFVFST-----THTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CTTSCHHHHHHTTCSCCEEEEEEC-----SCHHHHHHHHHHHSCTTCEEEEC
T ss_pred eCCCCHHHHHHHhcCCCceEEEEC-----CCchhhHHHHHHHhcCCCEEEEE
Confidence 2211 11 000 11246776642 12335678889999999999986
No 376
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.62 E-value=0.86 Score=40.00 Aligned_cols=41 Identities=37% Similarity=0.437 Sum_probs=32.2
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCC
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKAD 89 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~ 89 (268)
...++++|++||=+|+ |.|.+++.+|+..|+..++.++.++
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 3458899999999997 5788899999999987445555554
No 377
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.46 E-value=0.29 Score=47.25 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHh----------CC--cEEEEEeCCCCh-hHHHHHHH-------HHHHHHHHh-----c
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAAT----------GC--KICWGVEKADLP-AKYAEMHT-------VFKRWMQWY-----G 109 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~----------~~--~~v~GiD~s~~~-~~~a~~~~-------~~~~~~~~~-----~ 109 (268)
+.-+|+|+|.|+|...+.+.+.+ .. -+++.+|..|.. ..++++.. .+++.+... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999999887665543 11 258999997732 23332211 111111111 1
Q ss_pred c-----cc--ccEEEEEcCCCC-Ccc-cc-cccceEEEEEeccc--cCcC--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 110 K-----RH--GEFRLVKGDFLT-EEH-RE-KITQASIVFVNNFA--FGPT--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 110 ~-----~~--~~i~~~~gD~~~-l~~-~~-~~~d~dvv~~~~~~--~~~~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. .. -.++++.||+.+ ++- .. ....+|++|...+. ..|+ ....+..+.+.++|||++.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0 01 257888999865 331 11 12458899987663 2233 256789999999999998865
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.39 E-value=0.27 Score=45.02 Aligned_cols=39 Identities=23% Similarity=0.225 Sum_probs=32.9
Q ss_pred cCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 51 INATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 51 l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
.++++|++||=+|+ |.|.++..+|+..|+. +++++.++.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~-vi~~~~~~~ 264 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGAN-PICVVSSPQ 264 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEECCHH
Confidence 57899999999997 5688889999988986 888887763
No 379
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.38 E-value=0.08 Score=46.57 Aligned_cols=96 Identities=20% Similarity=0.244 Sum_probs=60.2
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
...++++|++||=+|+ |.|.++..+|+..|+. |+++ .++. +++ .++ +.|. .. +. +-.++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~-Vi~~-~~~~--~~~----~~~----~lGa---~~--i~-~~~~~~ 205 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGAR-VFAT-ARGS--DLE----YVR----DLGA---TP--ID-ASREPE 205 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE-ECHH--HHH----HHH----HHTS---EE--EE-TTSCHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEE-eCHH--HHH----HHH----HcCC---CE--ec-cCCCHH
Confidence 6678899999999994 4688889999988985 8998 6653 221 111 2332 11 22 222221
Q ss_pred --ccc--cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 127 --HRE--KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 127 --~~~--~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+ +...+|+++-..- ...+....+.|+|||+++..
T Consensus 206 ~~~~~~~~~~g~D~vid~~g------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 206 DYAAEHTAGQGFDLVYDTLG------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHHHHHTTSCEEEEEESSC------THHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHhcCCCceEEEECCC------cHHHHHHHHHHhcCCeEEEE
Confidence 000 1124677764321 14678888999999999975
No 380
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.55 E-value=0.48 Score=35.48 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--c
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE--K 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~--~ 130 (268)
.++|+=+||| .++..+++. .|.. |+++|.++. .+.. +. ...+.++.+|..+...-. .
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~-V~~id~~~~--~~~~----~~---------~~~~~~~~gd~~~~~~l~~~~ 67 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKK-VLAVDKSKE--KIEL----LE---------DEGFDAVIADPTDESFYRSLD 67 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCC-EEEEESCHH--HHHH----HH---------HTTCEEEECCTTCHHHHHHSC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCe-EEEEECCHH--HHHH----HH---------HCCCcEEECCCCCHHHHHhCC
Confidence 4578999985 455555543 4666 999999974 2211 11 124678999998754211 2
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
..++|++++..- ..+.........+.+. ..++++
T Consensus 68 ~~~~d~vi~~~~--~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 68 LEGVSAVLITGS--DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CTTCSEEEECCS--CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred cccCCEEEEecC--CHHHHHHHHHHHHHhC-CceEEE
Confidence 235666665311 2223333445556565 455554
No 381
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.21 E-value=0.33 Score=44.01 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EK 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~ 130 (268)
+++|+=+|| |.++..+++ ..|.. |+.||.++. .+.. +++ ..+.++.||..+...- .+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~-vvvId~d~~--~v~~----~~~---------~g~~vi~GDat~~~~L~~ag 65 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVK-MVVLDHDPD--HIET----LRK---------FGMKVFYGDATRMDLLESAG 65 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCC-EEEEECCHH--HHHH----HHH---------TTCCCEESCTTCHHHHHHTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCC-EEEEECCHH--HHHH----HHh---------CCCeEEEcCCCCHHHHHhcC
Confidence 456888887 555555554 34666 999999985 2222 111 2466899999986532 23
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..++|++++. .-.+.....+....|.+.|...+++.
T Consensus 66 i~~A~~viv~--~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 66 AAKAEVLINA--IDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp TTTCSEEEEC--CSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCccCEEEEC--CCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 3456676652 12233444556777888998887764
No 382
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=91.16 E-value=1.1 Score=39.01 Aligned_cols=103 Identities=17% Similarity=0.089 Sum_probs=59.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc-ccccEEEEEcCCCCCcccc----cc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK-RHGEFRLVKGDFLTEEHRE----KI 131 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~i~~~~gD~~~l~~~~----~~ 131 (268)
..||+||||.=..+..+.. ....+++-||. |. .++..++.+. ..+. ...+.+++.+|+.+ ...+ ..
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~-P~--vi~~k~~lL~----~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g 174 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEIDQ-PK--VLAYKSTTLA----EHGVTPTADRREVPIDLRQ-DWPPALRSAG 174 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEEC-HH--HHHHHHHHHH----HTTCCCSSEEEEEECCTTS-CHHHHHHHTT
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcCC-HH--HHHHHHHHHH----hcCCCCCCCeEEEecchHh-hHHHHHHhcc
Confidence 4699999998887655431 11235888884 43 3332222222 1221 23579999999987 3211 11
Q ss_pred c---ceEEEEEeccc-cC-cC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 T---QASIVFVNNFA-FG-PT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~---d~dvv~~~~~~-~~-~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+ ...+++++.++ +. ++ ....++.+...+.||+.+++.
T Consensus 175 ~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d 217 (310)
T 2uyo_A 175 FDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVE 217 (310)
T ss_dssp CCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 1 23466666653 33 32 444566667778899988874
No 383
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.01 E-value=0.41 Score=42.17 Aligned_cols=102 Identities=20% Similarity=0.203 Sum_probs=61.3
Q ss_pred HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.+...++++|++||-+|+|. |.++..+|+..|+. |++++.++.....++ ..|. . .++. ..+.
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~-Vi~~~~~~~~~~~~~----------~lGa---~-~v~~--~~~~ 233 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAE-TYVISRSSRKREDAM----------KMGA---D-HYIA--TLEE 233 (360)
T ss_dssp HHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCE-EEEEESSSTTHHHHH----------HHTC---S-EEEE--GGGT
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHH----------HcCC---C-EEEc--CcCc
Confidence 44557899999999999864 77788888888986 999999986322221 2232 1 1121 1111
Q ss_pred -cccccc-cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 -EHREKI-TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 -~~~~~~-~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+.. ..+|+++-..- ..+ ...+...++.|+|||+++..
T Consensus 234 ~~~~~~~~~~~D~vid~~g-~~~--~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 234 GDWGEKYFDTFDLIVVCAS-SLT--DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp SCHHHHSCSCEEEEEECCS-CST--TCCTTTGGGGEEEEEEEEEC
T ss_pred hHHHHHhhcCCCEEEECCC-CCc--HHHHHHHHHHhcCCCEEEEe
Confidence 111110 24677764321 100 12355677899999999975
No 384
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.79 E-value=0.67 Score=44.53 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHh----------CC--cEEEEEeCCCCh-hHHHHHHH-------HHHHHHHHhcc----
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAAT----------GC--KICWGVEKADLP-AKYAEMHT-------VFKRWMQWYGK---- 110 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~----------~~--~~v~GiD~s~~~-~~~a~~~~-------~~~~~~~~~~~---- 110 (268)
+.-+|||+|-|+|...+...+.+ .. -.++++|.-|-. ..++++.. .+++.......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999999999877665543 11 247999995421 12322211 11111111111
Q ss_pred ------c--cccEEEEEcCCCC-Ccc-ccc-ccceEEEEEeccc--cCcC--HHHHHHHHHhcCCCCcEEEEe
Q psy17227 111 ------R--HGEFRLVKGDFLT-EEH-REK-ITQASIVFVNNFA--FGPT--VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 111 ------~--~~~i~~~~gD~~~-l~~-~~~-~~d~dvv~~~~~~--~~~~--~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. .-.+++..||+.+ ++- ... ...+|+++...+. ..|+ -...+..+++.++|||.+.+.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0 1246678888865 331 111 2458899987763 2344 255689999999999999875
No 385
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.65 E-value=0.14 Score=44.17 Aligned_cols=54 Identities=26% Similarity=0.299 Sum_probs=36.9
Q ss_pred ccEEEEEcCCCC-Cc-ccccccceEEEEEeccccCc-C--------------------HHHHHHHHHhcCCCCcEEEEe
Q psy17227 113 GEFRLVKGDFLT-EE-HREKITQASIVFVNNFAFGP-T--------------------VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 113 ~~i~~~~gD~~~-l~-~~~~~~d~dvv~~~~~~~~~-~--------------------~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++++++||+.+ ++ ++++ .+|+|+++..++.. + +...+.++.|+|||||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~--s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEA--SVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTT--CEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCC--ceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 478999999977 22 2233 57889988765421 0 234567888999999999764
No 386
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.61 E-value=0.63 Score=41.19 Aligned_cols=94 Identities=19% Similarity=0.192 Sum_probs=55.7
Q ss_pred CCCCCEEEEEc-C-CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 53 ATPDDVFVDLG-S-GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 53 ~~~~~~vLDiG-C-G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
+++|++||=.| | |.|.++..+|+..|+. |++++ ++. ..+. ++ ..|. .. ++ |..+..+.+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~-Vi~~~-~~~--~~~~----~~----~lGa---~~-v~--~~~~~~~~~~ 242 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAH-VTAVC-SQD--ASEL----VR----KLGA---DD-VI--DYKSGSVEEQ 242 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE-CGG--GHHH----HH----HTTC---SE-EE--ETTSSCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEe-ChH--HHHH----HH----HcCC---CE-EE--ECCchHHHHH
Confidence 88999999999 3 4688888889988985 89988 553 2221 11 2332 11 12 2222111110
Q ss_pred ---ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ---ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ---~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...+|+++-..- .....+....+.|++||+++..
T Consensus 243 ~~~~~g~D~vid~~g----~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 243 LKSLKPFDFILDNVG----GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp HHTSCCBSEEEESSC----TTHHHHGGGGBCSSSCCEEEES
T ss_pred HhhcCCCCEEEECCC----ChhhhhHHHHHhhcCCcEEEEe
Confidence 113567664311 1123456778899999999975
No 387
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.84 E-value=0.41 Score=42.02 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=53.8
Q ss_pred HHHHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+.+..++++|++||=.|+ |.|.++..+|+..|..+|++++ ++. +.+. ++ .|. . .++. +-.+
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~--~~~~--------~~-~ga---~-~~~~-~~~~ 196 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STF--KHEA--------IK-DSV---T-HLFD-RNAD 196 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGG--GHHH--------HG-GGS---S-EEEE-TTSC
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHH--HHHH--------HH-cCC---c-EEEc-CCcc
Confidence 335578999999999998 3577788888777665689988 442 2211 11 222 1 1222 1112
Q ss_pred Cc--ccc-cccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE--HRE-KITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~--~~~-~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+. ..+ ....+|+++-..- . ..+....+.|+|||+++..
T Consensus 197 ~~~~~~~~~~~g~Dvv~d~~g---~---~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 197 YVQEVKRISAEGVDIVLDCLC---G---DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp HHHHHHHHCTTCEEEEEEECC-------------CTTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCceEEEECCC---c---hhHHHHHHHhhcCCEEEEE
Confidence 11 000 0013677764321 1 1236678999999999976
No 388
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.81 E-value=1.8 Score=31.72 Aligned_cols=92 Identities=12% Similarity=0.026 Sum_probs=49.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EK 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~ 130 (268)
+++|+=+|| |.++..+++. .|.. |+.+|.++. .... +.+ ...+.++.+|..+...- ..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~-v~~~d~~~~--~~~~----~~~--------~~~~~~~~~d~~~~~~l~~~~ 66 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHD-IVLIDIDKD--ICKK----ASA--------EIDALVINGDCTKIKTLEDAG 66 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH----HHH--------HCSSEEEESCTTSHHHHHHTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHH--HHHH----HHH--------hcCcEEEEcCCCCHHHHHHcC
Confidence 467888887 5555555543 4554 999999864 2111 111 11456788888654321 11
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEE
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIV 166 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i 166 (268)
..++|+|++.. ..+.....+....+.++++..++
T Consensus 67 ~~~~d~vi~~~--~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 67 IEDADMYIAVT--GKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp TTTCSEEEECC--SCHHHHHHHHHHHHHTTCCCEEE
T ss_pred cccCCEEEEee--CCchHHHHHHHHHHHcCCCEEEE
Confidence 23567777642 12223344556667788764333
No 389
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.50 E-value=0.19 Score=44.00 Aligned_cols=54 Identities=20% Similarity=0.036 Sum_probs=39.3
Q ss_pred ccEEEEEcCCCC-Cc-ccccccceEEEEEeccccCc---------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 113 GEFRLVKGDFLT-EE-HREKITQASIVFVNNFAFGP---------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 113 ~~i~~~~gD~~~-l~-~~~~~~d~dvv~~~~~~~~~---------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...++++||..+ ++ +++ ..+|+|+++..+... .+...+.++.|+|||||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~--~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPE--ESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCS--SCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCC--CCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 478899999875 33 233 357889988665332 2566788899999999999875
No 390
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.28 E-value=0.64 Score=42.23 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=32.7
Q ss_pred cCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 51 INATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 51 l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
.++++|++||=.|+ |.|.++..+|+..|+. +++++.++.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~-vi~~~~~~~ 256 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGI-PVAVVSSAQ 256 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHH
Confidence 67899999999997 5578888888888886 888887764
No 391
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.80 E-value=0.28 Score=45.49 Aligned_cols=60 Identities=15% Similarity=0.085 Sum_probs=40.4
Q ss_pred CCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
..+|+|+=||.|++..-+. ..|...|.++|+++. +.+.++. +.+. .+...++++|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~-~aG~~~v~avE~d~~------A~~ty~~---N~~~-~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFE-SIGGQCVFTSEWNKH------AVRTYKA---NHYC-DPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHH-TTTEEEEEEECCCHH------HHHHHHH---HSCC-CTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHH-HCCCEEEEEEeCCHH------HHHHHHH---hccc-CCCcceeccchhhhh
Confidence 4589999999999997654 467777899999985 2222221 1211 134567889998764
No 392
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.76 E-value=2.6 Score=37.15 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc--ccc
Q psy17227 54 TPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE--HRE 129 (268)
Q Consensus 54 ~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~--~~~ 129 (268)
++|++||=+|+ |.|.+++.+|+..|+. |+++. ++. +.+. + +..|. -.++...-.++. ..+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~-Vi~~~-~~~--~~~~----~----~~lGa----~~vi~~~~~~~~~~v~~ 226 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYI-PIATC-SPH--NFDL----A----KSRGA----EEVFDYRAPNLAQTIRT 226 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE-CGG--GHHH----H----HHTTC----SEEEETTSTTHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCE-EEEEe-CHH--HHHH----H----HHcCC----cEEEECCCchHHHHHHH
Confidence 88999999998 3799999999999986 88885 664 2221 1 12332 122222211211 000
Q ss_pred c-ccceEEEEEeccccCcCHHHHHHHHHhcC-CCCcEEEEe
Q psy17227 130 K-ITQASIVFVNNFAFGPTVDHALKERFQDL-KDGARIVSS 168 (268)
Q Consensus 130 ~-~~d~dvv~~~~~~~~~~~~~~l~e~~r~L-kpGG~~i~~ 168 (268)
. ...+|+++-. . .-...+...++.| ++||+++..
T Consensus 227 ~t~g~~d~v~d~-~----g~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 227 YTKNNLRYALDC-I----TNVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp HTTTCCCEEEES-S----CSHHHHHHHHHHSCTTCEEEEES
T ss_pred HccCCccEEEEC-C----CchHHHHHHHHHhhcCCCEEEEE
Confidence 0 0125666632 1 1135577788888 699999986
No 393
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.35 E-value=2.5 Score=32.03 Aligned_cols=97 Identities=9% Similarity=0.096 Sum_probs=56.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EK 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~ 130 (268)
..+|+=+|| |.++..+++. .|.. |+.+|.++. ..... +.. . ....+.++.||..+...- ..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~-V~vid~~~~-~~~~~----~~~---~---~~~~~~~i~gd~~~~~~l~~a~ 68 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQN-VTVISNLPE-DDIKQ----LEQ---R---LGDNADVIPGDSNDSSVLKKAG 68 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCC-EEEEECCCH-HHHHH----HHH---H---HCTTCEEEESCTTSHHHHHHHT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCC-EEEEECCCh-HHHHH----HHH---h---hcCCCeEEEcCCCCHHHHHHcC
Confidence 345777775 7777777654 3665 999999852 01111 111 0 013588999999875421 12
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..++|++++. .........+....+.+.|...+++.
T Consensus 69 i~~ad~vi~~--~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 69 IDRCRAILAL--SDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp TTTCSEEEEC--SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hhhCCEEEEe--cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 4456777653 12233455556667788777777763
No 394
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.32 E-value=0.58 Score=42.07 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=31.2
Q ss_pred HHHcCCCCCCEEEEEcCCCCHHHHHHHHHh-------CCcEEEEEeCCCC
Q psy17227 48 IDQINATPDDVFVDLGSGVGQVVLQVAAAT-------GCKICWGVEKADL 90 (268)
Q Consensus 48 l~~l~~~~~~~vLDiGCG~G~~~~~la~~~-------~~~~v~GiD~s~~ 90 (268)
.+.++....-+|+++|.|.|.++..+.+.. ...+++-||+|+.
T Consensus 73 w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~ 122 (387)
T 1zkd_A 73 WKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPV 122 (387)
T ss_dssp HHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHH
T ss_pred HHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHH
Confidence 334554455579999999999988776542 2226899999985
No 395
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.80 E-value=1 Score=39.35 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=55.4
Q ss_pred HHHHHcCCCCC-CEEEEE-cCC-CCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 46 RMIDQINATPD-DVFVDL-GSG-VGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 46 ~ll~~l~~~~~-~~vLDi-GCG-~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
.++...+ .++ ++||=. ||| .|.++..+|+..|+. |++++.++. +.+.+ + ..|. . .++ |.
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~-Vi~~~~~~~--~~~~~----~----~~Ga---~-~~~--~~ 216 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFR-PIVTVRRDE--QIALL----K----DIGA---A-HVL--NE 216 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCE-EEEEESCGG--GHHHH----H----HHTC---S-EEE--ET
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHH----H----HcCC---C-EEE--EC
Confidence 4455555 566 566543 443 466777888888985 999999886 22221 1 2232 1 122 22
Q ss_pred CCCcccccc------cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKI------TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~------~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+..+.+.. ..+|+++-..- ...+....+.|+|||+++..
T Consensus 217 ~~~~~~~~v~~~~~~~g~D~vid~~g------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 217 KAPDFEATLREVMKAEQPRIFLDAVT------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp TSTTHHHHHHHHHHHHCCCEEEESSC------HHHHHHHHHHSCTTCEEEEC
T ss_pred CcHHHHHHHHHHhcCCCCcEEEECCC------ChhHHHHHhhhcCCCEEEEE
Confidence 221111110 13567764321 22346778999999999986
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.48 E-value=5 Score=33.28 Aligned_cols=89 Identities=9% Similarity=0.062 Sum_probs=54.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHh---CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAAT---GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~---~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
++||=.|| |.++..+++.. |.. |++++.++. .... +. ..+++++.+|+.++. ..+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~----~~---------~~~~~~~~~D~~d~~----~~~ 63 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWR-IIGTSRNPD--QMEA----IR---------ASGAEPLLWPGEEPS----LDG 63 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCE-EEEEESCGG--GHHH----HH---------HTTEEEEESSSSCCC----CTT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCE-EEEEEcChh--hhhh----Hh---------hCCCeEEEecccccc----cCC
Confidence 68999994 99888887754 554 999999874 1111 11 247999999999865 345
Q ss_pred eEEEEEeccccC-cC-HHHHHHHHHhcCCCC-cEEEE
Q psy17227 134 ASIVFVNNFAFG-PT-VDHALKERFQDLKDG-ARIVS 167 (268)
Q Consensus 134 ~dvv~~~~~~~~-~~-~~~~l~e~~r~LkpG-G~~i~ 167 (268)
+|+|+..+.... .+ ....+.+..+..+.| .+||.
T Consensus 64 ~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~ 100 (286)
T 3ius_A 64 VTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGY 100 (286)
T ss_dssp CCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEE
T ss_pred CCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEE
Confidence 677776544322 22 223344444433222 46653
No 397
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.08 E-value=0.41 Score=43.31 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
++.+|+=+|+|. |..+..+++..|+. |+++|.++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAV-VSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEcCCHH
Confidence 568999999985 44455667778886 999999986
No 398
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.83 E-value=2.9 Score=36.53 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=32.0
Q ss_pred cCCCCC-CEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 51 INATPD-DVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 51 l~~~~~-~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
.++++| ++||=+|+ |.|.+++.+|+..|+. ++++.-++.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~-vi~~~~~~~ 203 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRP 203 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCT
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCcc
Confidence 478999 99999997 5688889999988986 788876653
No 399
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=86.01 E-value=1.1 Score=40.82 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCCHHHHHHHHHh---C--CcEEEEEeCCCChhH
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAAT---G--CKICWGVEKADLPAK 93 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~---~--~~~v~GiD~s~~~~~ 93 (268)
.-+|+|+|.|+|.++..+.+.. + ..+++-||+|+....
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~ 180 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRA 180 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHH
Confidence 4689999999999988776533 2 225899999997433
No 400
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.98 E-value=2.1 Score=34.51 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=53.3
Q ss_pred EEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cccc
Q psy17227 58 VFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EKIT 132 (268)
Q Consensus 58 ~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~~~ 132 (268)
+|+=+|+ |.++..+|+. .|.. |+.+|.++. .+.. +.+ ...+.++.||..+...- ....
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~-v~vid~~~~--~~~~----l~~--------~~~~~~i~gd~~~~~~l~~a~i~ 64 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYG-VVIINKDRE--LCEE----FAK--------KLKATIIHGDGSHKEILRDAEVS 64 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCC-EEEEESCHH--HHHH----HHH--------HSSSEEEESCTTSHHHHHHHTCC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHH--HHHH----HHH--------HcCCeEEEcCCCCHHHHHhcCcc
Confidence 4555665 6777766654 3565 999999874 2211 111 12567899999885421 1234
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|++++. .-.+.....+....+.+.|...+++.
T Consensus 65 ~ad~vi~~--~~~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 65 KNDVVVIL--TPRDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp TTCEEEEC--CSCHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred cCCEEEEe--cCCcHHHHHHHHHHHHHcCCCeEEEE
Confidence 56777653 12222344455666766677777653
No 401
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.60 E-value=0.99 Score=41.91 Aligned_cols=88 Identities=18% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 53 ATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 53 ~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
..+|++|+=+|+|. |..+...++.+|.. |+++|.++. .... +. ..| +++ .++. +-.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~-Viv~d~~~~--~~~~----A~----~~G-----a~~--~~l~-----e~l 327 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGAR-VSVTEIDPI--NALQ----AM----MEG-----FDV--VTVE-----EAI 327 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH--HHHH----HH----HTT-----CEE--CCHH-----HHG
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----HH----HcC-----CEE--ecHH-----HHH
Confidence 56899999999864 33344445557875 999999974 2111 11 122 222 1221 112
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+...- .+. .+ .+.++.+||||+++..
T Consensus 328 ~~aDvVi~atg--t~~---~i~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 328 GDADIVVTATG--NKD---IIMLEHIKAMKDHAILGNI 360 (494)
T ss_dssp GGCSEEEECSS--SSC---SBCHHHHHHSCTTCEEEEC
T ss_pred hCCCEEEECCC--CHH---HHHHHHHHhcCCCcEEEEe
Confidence 24677765321 111 12 3567789999999865
No 402
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=84.73 E-value=1.8 Score=37.91 Aligned_cols=101 Identities=20% Similarity=0.121 Sum_probs=59.6
Q ss_pred HHHHcCCC-CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQINAT-PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~~~-~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
.+...++. +|++||=+|+|. |.++..+|+..|+. |++++.++. +.+. +. +..|. .. ++ |..+
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~-Vi~~~~~~~--~~~~----~~---~~lGa--~~--vi--~~~~ 234 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSNK--KREE----AL---QDLGA--DD--YV--IGSD 234 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCE-EEEEESSTT--HHHH----HH---TTSCC--SC--EE--ETTC
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeCChH--HHHH----HH---HHcCC--ce--ee--cccc
Confidence 44566888 999999999863 66778888888985 999999985 2221 11 02232 11 12 1111
Q ss_pred Cc-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EE-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.. .......+|+++-..- . + ..+...++.|+|||+++..
T Consensus 235 ~~~~~~~~~g~D~vid~~g-~-~---~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 235 QAKMSELADSLDYVIDTVP-V-H---HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp HHHHHHSTTTEEEEEECCC-S-C---CCSHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhcCCCCEEEECCC-C-h---HHHHHHHHHhccCCEEEEe
Confidence 11 1111124677764221 1 1 1245667899999999975
No 403
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.41 E-value=3.3 Score=37.94 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=52.1
Q ss_pred CCEEEEEcCCCCHHH-HHHHHHhCCcEEEEEeCCCChhHHHHHHHHHH----HHHHHhcc------ccccEEEEEcCCCC
Q psy17227 56 DDVFVDLGSGVGQVV-LQVAAATGCKICWGVEKADLPAKYAEMHTVFK----RWMQWYGK------RHGEFRLVKGDFLT 124 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~-~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~----~~~~~~~~------~~~~i~~~~gD~~~ 124 (268)
-++|.=||+|.=+.+ .......|.. |+++|.++.. ++++++... +... .|. .....++ ..|..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~-V~l~D~~~~~--~~~~~~~i~~~l~~~~~-~g~~~~~~~~~~~~~i-~~~~~- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGIS-VVAVESDPKQ--LDAAKKIITFTLEKEAS-RAHQNGQASAKPKLRF-SSSTK- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSHHH--HHHHHHHHHHHHHHHHH-HHHHTTCCCCCCCEEE-ESCGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCe-EEEEECCHHH--HHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHhhh-cCCHH-
Confidence 357999999873332 2222335665 9999999853 332222211 1110 110 0112333 33431
Q ss_pred CcccccccceEEEEEeccccCcCH---HHHHHHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTV---DHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~---~~~l~e~~r~LkpGG~~i~~ 168 (268)
...++|+|+.... .+. ...+.++...++||..++++
T Consensus 111 -----~~~~aDlVIeaVp---e~~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 111 -----ELSTVDLVVEAVF---EDMNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp -----GGTTCSEEEECCC---SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred -----HHCCCCEEEEcCC---CCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 1235778776432 332 45667777889998888763
No 404
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=84.25 E-value=13 Score=32.39 Aligned_cols=116 Identities=10% Similarity=0.076 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHh-CCcEEEEEeCCCChhHHHHHHHHHHH---HHHHhc--------------cccccEE
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAAT-GCKICWGVEKADLPAKYAEMHTVFKR---WMQWYG--------------KRHGEFR 116 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GiD~s~~~~~~a~~~~~~~~---~~~~~~--------------~~~~~i~ 116 (268)
+...|+-||||.=.....+.... ....++=||..+. ++.-++.+.+ ..+..| ....+.+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~v---i~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~ 166 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMI---VTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYA 166 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHH---HHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHH---HHHHHHHHhhchhhhhhhcccccccccccccccCCCCceE
Confidence 45689999999999988876531 2234788888652 2211111111 000111 0135789
Q ss_pred EEEcCCCCCc-ccc-------cccceEEEEEecc--ccCcCHHHH-HHHHHhcCCCCcEEEEeCCCCCC
Q psy17227 117 LVKGDFLTEE-HRE-------KITQASIVFVNNF--AFGPTVDHA-LKERFQDLKDGARIVSSKSFCPL 174 (268)
Q Consensus 117 ~~~gD~~~l~-~~~-------~~~d~dvv~~~~~--~~~~~~~~~-l~e~~r~LkpGG~~i~~~~~~~~ 174 (268)
++..|+.++. +.. +.....+++++.+ ++.++.... ++.+.+.. |+|.+++++++.|.
T Consensus 167 ~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 167 VIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG 234 (334)
T ss_dssp EEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT
T ss_pred EEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC
Confidence 9999998842 111 1112346777765 344544444 44444444 66777777777654
No 405
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.18 E-value=0.55 Score=41.72 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-cccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE-HREKIT 132 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~-~~~~~~ 132 (268)
++++|+=+|+|. |..+...++..|+. |+++|.++. ..+. +.+ ..+. .+.. |..+.. +.+-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~-V~~~d~~~~--~~~~----~~~---~~g~---~~~~---~~~~~~~l~~~~~ 228 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQ-VTILDVNHK--RLQY----LDD---VFGG---RVIT---LTATEANIKKSVQ 228 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH----HHH---HTTT---SEEE---EECCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEECCHH--HHHH----HHH---hcCc---eEEE---ecCCHHHHHHHHh
Confidence 458999999852 33334445557885 999999974 2221 111 1121 2222 222211 111122
Q ss_pred ceEEEEEeccccC-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFG-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+|+++....... ..+.-..++..+.+||||+++..
T Consensus 229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp HCSEEEECCC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 4677765322111 11111246778889999998864
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.91 E-value=6.6 Score=31.83 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHhCCc-EEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc--cc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAATGCK-ICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR--EK 130 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~~~~~-~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~--~~ 130 (268)
...++|+=+|| |.++..+++..... .|+++|.++. .+.. + . ..+.++.||..+...- .+
T Consensus 7 ~~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~--~~~~----~---------~-~~~~~i~gd~~~~~~l~~a~ 68 (234)
T 2aef_A 7 AKSRHVVICGW--SESTLECLRELRGSEVFVLAEDENV--RKKV----L---------R-SGANFVHGDPTRVSDLEKAN 68 (234)
T ss_dssp ---CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGG--HHHH----H---------H-TTCEEEESCTTCHHHHHHTT
T ss_pred CCCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHH--HHHH----H---------h-cCCeEEEcCCCCHHHHHhcC
Confidence 34567888887 68888888765331 1899998875 2211 1 1 2578999999875421 22
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..++|++++. ...+..........+.+.|+..+++.
T Consensus 69 i~~ad~vi~~--~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 69 VRGARAVIVD--LESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp CTTCSEEEEC--CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cchhcEEEEc--CCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 3456777653 12222344455667888888777754
No 407
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=83.32 E-value=7.6 Score=31.76 Aligned_cols=77 Identities=9% Similarity=-0.101 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH----hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA----TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~----~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
+++++|=.| |+|+++..+++. .|+. |+.++.++. ......+.++ .. ..++.++.+|+.+...-..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~-V~~~~r~~~--~~~~~~~~l~----~~---~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGD-VVLTARDVT--RGQAAVQQLQ----AE---GLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSE-EEEEESSHH--HHHHHHHHHH----HT---TCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCe-EEEEeCChH--HHHHHHHHHH----hc---CCeeEEEECCCCCHHHHHH
Confidence 456788777 567787777654 3554 899998753 2222222222 11 2478899999988531111
Q ss_pred --------ccceEEEEEecc
Q psy17227 131 --------ITQASIVFVNNF 142 (268)
Q Consensus 131 --------~~d~dvv~~~~~ 142 (268)
....|+++.++.
T Consensus 72 ~~~~~~~~~g~id~li~~Ag 91 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCc
Confidence 114677776643
No 408
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.92 E-value=0.57 Score=42.05 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
++.+|+=||+|. |..+..+++..|+. |+++|.++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAK-TTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeCCHH
Confidence 578999999985 44455666778986 999999985
No 409
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.26 E-value=0.46 Score=42.46 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
++.+|+=+|+|. |..+...++..|.. |+++|.++. ..+. +++ ..|. .+.....+..+ +.+....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~-V~~~d~~~~--~l~~----~~~---~~g~---~~~~~~~~~~~--l~~~l~~ 231 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGAT-VTVLDINID--KLRQ----LDA---EFCG---RIHTRYSSAYE--LEGAVKR 231 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH----HHH---HTTT---SSEEEECCHHH--HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEeCCHH--HHHH----HHH---hcCC---eeEeccCCHHH--HHHHHcC
Confidence 578999999953 33344445567884 999999974 2211 111 1121 22221111111 1111224
Q ss_pred eEEEEEeccccC-cCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFG-PTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~-~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+|+|+.....-. ....-...+..+.+||||+++-.
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 577765321111 11111145677889999999864
No 410
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=82.23 E-value=12 Score=31.60 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-- 129 (268)
.++++|=.|++ |+++..+|+. .|+. |+.++.+.......+..+..+ .. ..++.++.+|+.+...-.
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~Dv~d~~~v~~~ 118 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGAD-VAINYLPAEEEDAQQVKALIE----EC---GRKAVLLPGDLSDESFARSL 118 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEECCGGGHHHHHHHHHHHH----HT---TCCEEECCCCTTSHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCE-EEEEeCCcchhHHHHHHHHHH----Hc---CCcEEEEEecCCCHHHHHHH
Confidence 46789999964 6666666654 3665 888888743222222222111 22 247899999998854111
Q ss_pred ------cccceEEEEEeccccC--c-----C---HHH-----------HHHHHHhcCCCCcEEEEe
Q psy17227 130 ------KITQASIVFVNNFAFG--P-----T---VDH-----------ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ------~~~d~dvv~~~~~~~~--~-----~---~~~-----------~l~e~~r~LkpGG~~i~~ 168 (268)
.....|+++.++-... . + +.. ..+.+...++++|+||..
T Consensus 119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 1124677776654211 1 1 111 123444677888998865
No 411
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=82.08 E-value=7.6 Score=34.40 Aligned_cols=105 Identities=11% Similarity=0.196 Sum_probs=58.3
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHHhCCcEEEEEeCCCChhHHHH--HHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 46 RMIDQIN-ATPDDVFVDLGSGVGQVVLQVAAATGCKICWGVEKADLPAKYAE--MHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 46 ~ll~~l~-~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~--~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
-+++.+. ...+.+||.||.+.|.++..++.. . ++.+.=| .++. ...++. ..+.....+++... .
T Consensus 28 ~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~---~-~~~~~ds----~~~~~~~~~n~~----~~~~~~~~~~~~~~-~ 94 (375)
T 4dcm_A 28 YLLQQLDDTEIRGPVLILNDAFGALSCALAEH---K-PYSIGDS----YISELATRENLR----LNGIDESSVKFLDS-T 94 (375)
T ss_dssp HHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG---C-CEEEESC----HHHHHHHHHHHH----HTTCCGGGSEEEET-T
T ss_pred HHHHhhhhccCCCCEEEECCCCCHHHHhhccC---C-ceEEEhH----HHHHHHHHHHHH----HcCCCccceEeccc-c
Confidence 3566642 335567999999999998776532 2 4566333 2222 223332 34444345666432 2
Q ss_pred CCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..++ .++|++.+...=........+..+...|+||+.+++.
T Consensus 95 ~~~~-----~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 95 ADYP-----QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp SCCC-----SSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred cccc-----cCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 2222 2456666531111122444567777899999999865
No 412
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=81.97 E-value=1 Score=40.62 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
++.+|+=+|+|. |..+..+++..|+. |+.+|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHH
Confidence 578999999975 33455566678885 999999985
No 413
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=81.91 E-value=3.2 Score=35.89 Aligned_cols=92 Identities=14% Similarity=0.110 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHHh--CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc--cccc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAAT--GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH--REKI 131 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~--~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~--~~~~ 131 (268)
.++++=+|| |..+..+++.. ... |+.+|.+++... ++ ...+.+++||..+... ..+.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-------~~---------~~~~~~i~gd~~~~~~L~~a~i 175 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-------VL---------RSGANFVHGDPTRVSDLEKANV 175 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-------HH---------HTTCEEEESCTTSHHHHHHTCS
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-------HH---------hCCcEEEEeCCCCHHHHHhcCh
Confidence 457877776 78888887754 223 899999986222 11 1367899999988652 1234
Q ss_pred cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++|.+++.. ..++..-......+.+.|..+++..
T Consensus 176 ~~a~~vi~~~--~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 176 RGARAVIVDL--ESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp TTEEEEEECC--SSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred hhccEEEEcC--CccHHHHHHHHHHHHHCCCCeEEEE
Confidence 5677777631 1222333345566888888777764
No 414
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.88 E-value=2.6 Score=37.09 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=59.7
Q ss_pred HHHHHcCCC-CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 46 RMIDQINAT-PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 46 ~ll~~l~~~-~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
..+...++. +|++||=+|+|. |.++..+|+..|+. |++++.++. +.+.+ .+ ..|. . .++ |..
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~-Vi~~~~~~~--~~~~~----~~---~lGa---~-~v~--~~~ 240 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSK-VTVISTSPS--KKEEA----LK---NFGA---D-SFL--VSR 240 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCGG--GHHHH----HH---TSCC---S-EEE--ETT
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHH----HH---hcCC---c-eEE--ecc
Confidence 345567888 999999999864 66677888888885 999999875 22211 10 1221 1 122 222
Q ss_pred CCc-ccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEE-HREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~-~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+.. ...-...+|+++-..- . + ..+...++.|++||+++..
T Consensus 241 ~~~~~~~~~~~~D~vid~~g-~-~---~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 241 DQEQMQAAAGTLDGIIDTVS-A-V---HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp CHHHHHHTTTCEEEEEECCS-S-C---CCSHHHHHHEEEEEEEEEC
T ss_pred CHHHHHHhhCCCCEEEECCC-c-H---HHHHHHHHHHhcCCEEEEE
Confidence 211 1111124677764321 1 1 1245667889999999875
No 415
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.79 E-value=1.5 Score=39.13 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
++.+|+=+|+|. |..+..+++..|+. |+.+|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAV-VMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHH
Confidence 688999999975 33355566678886 999999985
No 416
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.95 E-value=0.57 Score=39.42 Aligned_cols=52 Identities=2% Similarity=-0.028 Sum_probs=33.5
Q ss_pred EEEEEcCCCCC-c-ccccccceEEEEEeccccCc---------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 115 FRLVKGDFLTE-E-HREKITQASIVFVNNFAFGP---------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 115 i~~~~gD~~~l-~-~~~~~~d~dvv~~~~~~~~~---------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++++||+.+. . +++ ..+|+|++...+... -....+.+++++|||||.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~--~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVEN--KSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCT--TCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccc--cccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 34678887542 1 122 246788887654332 2345678888999999998875
No 417
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.64 E-value=5.2 Score=31.78 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=55.2
Q ss_pred CEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
++||=.|+ +|.++..+++. .|.. |++++.++. .... ....+++++.+|+.+... .....
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~~-V~~~~R~~~--~~~~-------------~~~~~~~~~~~D~~d~~~-~~~~~ 62 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGHE-VLAVVRDPQ--KAAD-------------RLGATVATLVKEPLVLTE-ADLDS 62 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHH-------------HTCTTSEEEECCGGGCCH-HHHTT
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCCE-EEEEEeccc--cccc-------------ccCCCceEEecccccccH-hhccc
Confidence 35777775 57777666654 3655 999998863 1111 012478999999987654 22335
Q ss_pred eEEEEEecccc-CcC----HHHHHHHHHhcCCC-CcEEEEe
Q psy17227 134 ASIVFVNNFAF-GPT----VDHALKERFQDLKD-GARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~-~~~----~~~~l~e~~r~Lkp-GG~~i~~ 168 (268)
+|+|+.+.... .+. .......+.+.++. |++++..
T Consensus 63 ~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 63 VDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 67777655432 211 22234556665544 5777754
No 418
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=80.61 E-value=20 Score=30.09 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-- 129 (268)
.++++|=.|++ |+++..+|+. .|+. |+.++.++. .... ...+.... ...++.++.+|+.+..--.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~-V~~~~r~~~--~~~~---~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~ 115 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGAN-IAIAYLDEE--GDAN---ETKQYVEK---EGVKCVLLPGDLSDEQHCKDI 115 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEESSCH--HHHH---HHHHHHHT---TTCCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCE-EEEEeCCch--HHHH---HHHHHHHh---cCCcEEEEECCCCCHHHHHHH
Confidence 46789999965 5566666554 3665 899999874 1111 11111111 1247999999998854111
Q ss_pred ------cccceEEEEEecccc-C-c-----C---HHH-----------HHHHHHhcCCCCcEEEEe
Q psy17227 130 ------KITQASIVFVNNFAF-G-P-----T---VDH-----------ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ------~~~d~dvv~~~~~~~-~-~-----~---~~~-----------~l~e~~r~LkpGG~~i~~ 168 (268)
.....|+++.++-.. . . + +.. ..+.+...++++|+||..
T Consensus 116 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 116 VQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 112467777664321 1 1 1 111 123445667888988865
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=79.56 E-value=14 Score=32.01 Aligned_cols=101 Identities=12% Similarity=0.003 Sum_probs=52.1
Q ss_pred CEEEEEcCCCCH--HHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHH---HHhcccc---------ccEEEEEcCC
Q psy17227 57 DVFVDLGSGVGQ--VVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWM---QWYGKRH---------GEFRLVKGDF 122 (268)
Q Consensus 57 ~~vLDiGCG~G~--~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~---~~~~~~~---------~~i~~~~gD~ 122 (268)
.+|-=||+|+=+ ++..++ ..|.. |++.|.++. .++++.+.+++.. ...|... .++++. .|.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la-~~G~~-V~l~d~~~~--~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFR-VKLYDIEPR--QITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCC-EEEECSCHH--HHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred ceEEEEeeCHHHHHHHHHHH-HCCCE-EEEEeCCHH--HHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 468888887522 233333 35776 999999986 3333322222111 1122110 134442 222
Q ss_pred CCCcccccccceEEEEEeccccCcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
. +-..++|+|+.... -..+ ....+.++...++||..+++.
T Consensus 82 ~-----eav~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 82 A-----EAVEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp H-----HHTTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred H-----HHHhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 1 12246788876422 1112 244577888889999887744
No 420
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.30 E-value=0.88 Score=39.70 Aligned_cols=53 Identities=11% Similarity=-0.060 Sum_probs=36.7
Q ss_pred cEEEE-EcCCCC-Cc-ccccccceEEEEEeccccCc------------CHHHHHHHHHhcCCCCcEEEEe
Q psy17227 114 EFRLV-KGDFLT-EE-HREKITQASIVFVNNFAFGP------------TVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 114 ~i~~~-~gD~~~-l~-~~~~~~d~dvv~~~~~~~~~------------~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+++ +||+.+ +. ++++ .+|+|++...+... .....+.++.++|||||.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~--svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDD--SVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTT--CEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccC--CcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 46777 999865 22 2232 57889987664332 2455678888999999999875
No 421
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.88 E-value=4.5 Score=34.13 Aligned_cols=103 Identities=12% Similarity=-0.012 Sum_probs=50.0
Q ss_pred CEEEEEcCCCCHHH-HHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHH---Hhc--cc-------cccEEEEEcCCC
Q psy17227 57 DVFVDLGSGVGQVV-LQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQ---WYG--KR-------HGEFRLVKGDFL 123 (268)
Q Consensus 57 ~~vLDiGCG~G~~~-~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~---~~~--~~-------~~~i~~~~gD~~ 123 (268)
++|.=||+|+=+.+ ...+...|.. |+..|.+++ .++++.+.+.+... ..+ .. ..++++ ..|..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~-V~l~d~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFA-VTAYDINTD--ALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSHH--HHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCe-EEEEeCCHH--HHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 46777888752222 2222335765 999999986 33332222211100 001 00 012333 22221
Q ss_pred CCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
+...++|+|+....-........+.++...++|+..++..
T Consensus 81 -----~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 81 -----QAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp -----HHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred -----HHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 1123567777642211112345577888889999888753
No 422
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=78.27 E-value=12 Score=30.82 Aligned_cols=74 Identities=8% Similarity=0.113 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-- 129 (268)
.++++|=.|++ |+++..+|+. .|+. |+.++.++. .+.+..+ +. ..++.++.+|+.+..--.
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~-V~~~~r~~~--~~~~~~~-------~~---~~~~~~~~~Dv~~~~~v~~~ 72 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAE-VLLTGRNES--NIARIRE-------EF---GPRVHALRSDIADLNEIAVL 72 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHH-------HH---GGGEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHHHH-------Hh---CCcceEEEccCCCHHHHHHH
Confidence 56789989965 5566555554 3665 999998864 2222111 11 247899999999854211
Q ss_pred ------cccceEEEEEecc
Q psy17227 130 ------KITQASIVFVNNF 142 (268)
Q Consensus 130 ------~~~d~dvv~~~~~ 142 (268)
.....|+++.++-
T Consensus 73 ~~~~~~~~g~id~lv~nAg 91 (255)
T 4eso_A 73 GAAAGQTLGAIDLLHINAG 91 (255)
T ss_dssp HHHHHHHHSSEEEEEECCC
T ss_pred HHHHHHHhCCCCEEEECCC
Confidence 1124677776653
No 423
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.04 E-value=1.1 Score=40.73 Aligned_cols=94 Identities=19% Similarity=0.216 Sum_probs=53.0
Q ss_pred HHHHcC-CCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQIN-ATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~-~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+....+ .-.|.+|+=+|+|. |..+...++.+|+. |++.|.++. ...+ +. ..| .++ .++
T Consensus 210 i~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~-Viv~D~dp~--ra~~----A~----~~G-----~~v--~~L-- 269 (435)
T 3gvp_A 210 LKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSI-VYVTEIDPI--CALQ----AC----MDG-----FRL--VKL-- 269 (435)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH--HHHH----HH----HTT-----CEE--CCH--
T ss_pred HHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEEeCChh--hhHH----HH----HcC-----CEe--ccH--
Confidence 333334 34789999999986 44444555667886 999999973 1111 10 111 111 122
Q ss_pred CcccccccceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
.+-...+|+|+.. +.....+ .+.++.+|||+.++-+
T Consensus 270 ---eeal~~ADIVi~a-----tgt~~lI~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 270 ---NEVIRQVDIVITC-----TGNKNVVTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp ---HHHTTTCSEEEEC-----SSCSCSBCHHHHHHSCTTEEEEEC
T ss_pred ---HHHHhcCCEEEEC-----CCCcccCCHHHHHhcCCCcEEEEe
Confidence 1222346777662 1112233 3677889999988864
No 424
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=77.93 E-value=3.3 Score=36.26 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=31.9
Q ss_pred cCCCCCCEEEEEcCCC-CHHHHHHHHHh-CCcEEEEEeCCCC
Q psy17227 51 INATPDDVFVDLGSGV-GQVVLQVAAAT-GCKICWGVEKADL 90 (268)
Q Consensus 51 l~~~~~~~vLDiGCG~-G~~~~~la~~~-~~~~v~GiD~s~~ 90 (268)
.++++|++||=+|+|. |.++..+|+.. |+. |+++|.++.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~-Vi~~~~~~~ 222 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPAT-VIALDVKEE 222 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCE-EEEEESSHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEeCCHH
Confidence 7899999999999853 55577778888 885 999999874
No 425
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=77.46 E-value=2.8 Score=38.47 Aligned_cols=101 Identities=11% Similarity=0.184 Sum_probs=53.5
Q ss_pred CCEEEEEcCCC-C-HHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc--------ccccEEEEEcCCCCC
Q psy17227 56 DDVFVDLGSGV-G-QVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK--------RHGEFRLVKGDFLTE 125 (268)
Q Consensus 56 ~~~vLDiGCG~-G-~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~--------~~~~i~~~~gD~~~l 125 (268)
-++|-=||+|+ | .++..++ ..|.. |+..|++++ ...+...+.+++.. ..|. ...++++. .|..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la-~aG~~-V~l~D~~~e-~a~~~i~~~l~~~~-~~G~l~~~~~~~~~~~i~~t-~dl~-- 126 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFG-LAGIE-TFLVVRNEQ-RCKQELEVMYAREK-SFKRLNDKRIEKINANLKIT-SDFH-- 126 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCE-EEEECSCHH-HHHHHHHHHHHHHH-HTTSCCHHHHHHHHTTEEEE-SCGG--
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCe-EEEEECcHH-HHHHHHHHHHHHHH-HcCCCCHHHHHHHhcceEEe-CCHH--
Confidence 35788899986 3 2333333 45776 999999985 11111222222211 1111 01245443 2331
Q ss_pred cccccccceEEEEEeccccCcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREKITQASIVFVNNFAFGPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~~~~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...++|+|+.... -..+ ....+.++...++||..|++.
T Consensus 127 ----al~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 127 ----KLSNCDLIVESVI-EDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp ----GCTTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred ----HHccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 2246788876422 1122 344578888899999988754
No 426
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=77.44 E-value=1.5 Score=38.70 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=24.6
Q ss_pred CCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 56 DDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 56 ~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
+.+|+=+|+|. |..+..+++..|+ +|+.+|.++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~ 201 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVE 201 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence 48999999953 3334455566788 5999999974
No 427
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.36 E-value=12 Score=31.60 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK- 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~- 130 (268)
.++++|=.|+ +|+++..+|+. .|+. |+.++.++. .+.+..+.+. ..+....++.++.+|+.+...-..
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~-V~~~~r~~~--~~~~~~~~l~----~~~~~~~~~~~~~~Dv~d~~~v~~~ 96 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQ-VTITGRNED--RLEETKQQIL----KAGVPAEKINAVVADVTEASGQDDI 96 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHHHHH----HTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHHHHHHH----hcCCCCceEEEEecCCCCHHHHHHH
Confidence 4678888886 46666666654 3665 899998864 2222222221 112111278999999988541111
Q ss_pred -------ccceEEEEEecc
Q psy17227 131 -------ITQASIVFVNNF 142 (268)
Q Consensus 131 -------~~d~dvv~~~~~ 142 (268)
....|+++.++-
T Consensus 97 ~~~~~~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 97 INTTLAKFGKIDILVNNAG 115 (297)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 114677776653
No 428
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=77.21 E-value=28 Score=28.65 Aligned_cols=63 Identities=24% Similarity=0.245 Sum_probs=38.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.++++|=.|+ +|+++..+++. .|+. |+.++.++. ......+.+ +..+. ..++.++.+|+.+..
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~~----~~~~~-~~~~~~~~~Dl~~~~ 96 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLK-VVGCARTVG--NIEELAAEC----KSAGY-PGTLIPYRCDLSNEE 96 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHHHH----HHTTC-SSEEEEEECCTTCHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCE-EEEEECChH--HHHHHHHHH----HhcCC-CceEEEEEecCCCHH
Confidence 4678888885 46776666654 3665 999998863 222221211 22221 246889999998854
No 429
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=76.91 E-value=14 Score=31.10 Aligned_cols=77 Identities=13% Similarity=-0.012 Sum_probs=43.7
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.++++|=.|++. ++++..+|+. .|+. |+.++.++.. .....+..+ . .+.+.++.+|+.+..--..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r~~~~--~~~~~~~~~----~----~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYLSETF--KKRVDPLAE----S----LGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGG--HHHHHHHHH----H----HTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeCChHH--HHHHHHHHH----h----cCCeEEEEcCCCCHHHHHH
Confidence 467899999753 3444444433 4776 8999998642 111111111 1 2357899999998541111
Q ss_pred --------ccceEEEEEecc
Q psy17227 131 --------ITQASIVFVNNF 142 (268)
Q Consensus 131 --------~~d~dvv~~~~~ 142 (268)
....|+++.++-
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 124577776654
No 430
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=76.56 E-value=2 Score=36.89 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|++|.=||+|. |......++.+|.. |++.|.++.. ...++ . ..++. +-..+
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~~~--------------------~~~~~--~--~~~l~--ell~~ 173 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMR-VIAYTRSSVD--------------------QNVDV--I--SESPA--DLFRQ 173 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCE-EEEECSSCCC--------------------TTCSE--E--CSSHH--HHHHH
T ss_pred ecchheeeccCchhHHHHHHHHhhCcE-EEEEeccccc--------------------ccccc--c--cCChH--HHhhc
Confidence 478999999975 44444445567887 9999998740 01111 1 11111 22234
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++.... .++....+ .+.+..||||..|+-+
T Consensus 174 aDiV~l~~P~-t~~t~~li~~~~l~~mk~gailIN~ 208 (290)
T 3gvx_A 174 SDFVLIAIPL-TDKTRGMVNSRLLANARKNLTIVNV 208 (290)
T ss_dssp CSEEEECCCC-CTTTTTCBSHHHHTTCCTTCEEEEC
T ss_pred cCeEEEEeec-cccchhhhhHHHHhhhhcCceEEEe
Confidence 6777764331 12222233 5678899999998854
No 431
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=76.42 E-value=5.3 Score=29.15 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc-cc-c
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH-RE-K 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~-~~-~ 130 (268)
+++|+=+|| |.++..+++. .|.. |+.+|.++. .... + ......++.+|..+... .. .
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~-v~~~d~~~~--~~~~----~---------~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHE-VLAVDINEE--KVNA----Y---------ASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCC-CEEEESCHH--HHHT----T---------TTTCSEEEECCTTCHHHHHTTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCE-EEEEeCCHH--HHHH----H---------HHhCCEEEEeCCCCHHHHHhcC
Confidence 456999997 5666555543 4665 899998863 1111 1 11134567888876331 11 1
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
...+|+++...- ...+....+....+.+.+. .+++
T Consensus 68 ~~~~d~vi~~~~-~~~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 68 IRNFEYVIVAIG-ANIQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp GGGCSEEEECCC-SCHHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCCCCEEEECCC-CchHHHHHHHHHHHHcCCC-eEEE
Confidence 235677775322 1112333455556667775 5554
No 432
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=76.19 E-value=2.6 Score=36.63 Aligned_cols=89 Identities=18% Similarity=0.112 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|++|.=||+|. |......++.+|.. |+|.|.++.. ...+.-..+ .. .+.+-...
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~-V~~~dr~~~~--------------------~~~~~~~~~-~~--~l~ell~~ 193 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFP-LRCWSRSRKS--------------------WPGVESYVG-RE--ELRAFLNQ 193 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCC-EEEEESSCCC--------------------CTTCEEEES-HH--HHHHHHHT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEEcCCchh--------------------hhhhhhhcc-cC--CHHHHHhh
Confidence 477899998864 33333444557877 9999998741 011111111 01 11122234
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++... ..++....+ .+.+..||||..||-+
T Consensus 194 aDiV~l~~P-lt~~t~~li~~~~l~~mk~gailIN~ 228 (315)
T 3pp8_A 194 TRVLINLLP-NTAQTVGIINSELLDQLPDGAYVLNL 228 (315)
T ss_dssp CSEEEECCC-CCGGGTTCBSHHHHTTSCTTEEEEEC
T ss_pred CCEEEEecC-CchhhhhhccHHHHhhCCCCCEEEEC
Confidence 677876432 223333334 5677899999888753
No 433
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.92 E-value=30 Score=28.54 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCC----------hhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADL----------PAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~----------~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.++++|=.|++ |+++..+|+. .|+. |+.+|.+.. ...+.+....++ .. ..++.++.+|
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~D 79 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLATSRDLEEAGLEVE----KT---GRKAYTAEVD 79 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEECCSCCTTSCSCCCCHHHHHHHHHHHH----HT---TSCEEEEECC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCe-EEEEcccccccccccchhhhHHHHHHHHHHH----hc---CCceEEEEcc
Confidence 46789988876 4555555544 3666 899998732 112222111111 11 2479999999
Q ss_pred CCCCcccc--------cccceEEEEEeccccC-------cCHHHH-----------HHHHHhcCCCCcEEEEe
Q psy17227 122 FLTEEHRE--------KITQASIVFVNNFAFG-------PTVDHA-----------LKERFQDLKDGARIVSS 168 (268)
Q Consensus 122 ~~~l~~~~--------~~~d~dvv~~~~~~~~-------~~~~~~-----------l~e~~r~LkpGG~~i~~ 168 (268)
+.+..--. .....|+++.++-... .++... .+.+...++++|+++..
T Consensus 80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 80 VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 99854111 1124677776654321 112221 23444567788888865
No 434
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=75.47 E-value=33 Score=28.22 Aligned_cols=104 Identities=20% Similarity=0.182 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc--
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE-- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~-- 129 (268)
.++++|=.|++ |+++..+|+. .|+. |+.++.... .......+.++ .. ..++.++.+|+.+..--.
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~-V~~~~~~~~-~~~~~~~~~~~----~~---~~~~~~~~~Dv~~~~~v~~~ 86 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAK-VVVNYANST-KDAEKVVSEIK----AL---GSDAIAIKADIRQVPEIVKL 86 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCE-EEEEESSCH-HHHHHHHHHHH----HT---TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCE-EEEEcCCCH-HHHHHHHHHHH----hc---CCcEEEEEcCCCCHHHHHHH
Confidence 46788988865 5565555554 3665 788777652 11222112221 12 247999999999854111
Q ss_pred ------cccceEEEEEeccccCc------C---HHH-----------HHHHHHhcCCCCcEEEEe
Q psy17227 130 ------KITQASIVFVNNFAFGP------T---VDH-----------ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 130 ------~~~d~dvv~~~~~~~~~------~---~~~-----------~l~e~~r~LkpGG~~i~~ 168 (268)
.....|+++.++-.... + +.. ..+.+...++++|++|..
T Consensus 87 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 87 FDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 11245777755432111 1 111 124445677888998865
No 435
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=75.46 E-value=8.9 Score=34.92 Aligned_cols=26 Identities=23% Similarity=0.165 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 148 VDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 148 ~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
...+++.+...|++|..+|...+..|
T Consensus 108 v~~v~~~i~~~l~~g~iVV~~STv~p 133 (446)
T 4a7p_A 108 VFAAAREIAENLTKPSVIVTKSTVPV 133 (446)
T ss_dssp HHHHHHHHHHSCCSCCEEEECSCCCT
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCc
Confidence 56667888889999988886544434
No 436
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=75.36 E-value=5.3 Score=28.04 Aligned_cols=70 Identities=11% Similarity=-0.018 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-cccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE-HREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~-~~~~ 130 (268)
.+++|+=+|| |.++..+++ ..|...|+++|.++. .... +. ...+.++.+|+.+.. ...-
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~--~~~~----~~---------~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLA--ALAV----LN---------RMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHH--HHHH----HH---------TTTCEEEECCTTCHHHHHHH
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHH--HHHH----HH---------hCCCcEEEecCCCHHHHHHH
Confidence 3568999999 666555544 346345999999863 1111 11 135778888887643 1122
Q ss_pred ccceEEEEEec
Q psy17227 131 ITQASIVFVNN 141 (268)
Q Consensus 131 ~~d~dvv~~~~ 141 (268)
...+|+|+...
T Consensus 67 ~~~~d~vi~~~ 77 (118)
T 3ic5_A 67 LGGFDAVISAA 77 (118)
T ss_dssp TTTCSEEEECS
T ss_pred HcCCCEEEECC
Confidence 23467776543
No 437
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=75.04 E-value=24 Score=28.78 Aligned_cols=63 Identities=10% Similarity=0.091 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCC-HHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGSGVG-QVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGCG~G-~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.++++|=.|++.| +++..+|+ ..|+. |+.++.++.. .....+. ....+ ..++.++.+|+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~--~~~~~~~----~~~~~--~~~~~~~~~D~~~~~ 72 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAGERL--EKSVHEL----AGTLD--RNDSIILPCDVTNDA 72 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGG--HHHHHHH----HHTSS--SCCCEEEECCCSSSH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCchHH--HHHHHHH----HHhcC--CCCceEEeCCCCCHH
Confidence 4678999997632 23333333 24776 8999888641 1111111 11111 237999999999864
No 438
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=74.66 E-value=8.9 Score=35.28 Aligned_cols=97 Identities=11% Similarity=0.062 Sum_probs=50.9
Q ss_pred CEEEEEcCCCCH--HHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHH---hccc--------cccEEEEEcCCC
Q psy17227 57 DVFVDLGSGVGQ--VVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQW---YGKR--------HGEFRLVKGDFL 123 (268)
Q Consensus 57 ~~vLDiGCG~G~--~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~---~~~~--------~~~i~~~~gD~~ 123 (268)
++|-=||+|+=+ ++..++ ..|.. |+..|.+++ .++++.+.+.+.... .|.. ..++++. .|..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la-~aG~~-V~l~D~~~e--~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA-SHGHQ-VLLYDISAE--ALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCC-EEEECSCHH--HHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCe-EEEEECCHH--HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH
Confidence 357778887622 233333 35776 999999986 333332222211100 1100 0134442 2321
Q ss_pred CCcccccccceEEEEEeccccCcC---HHHHHHHHHhcCCCCcEEEE
Q psy17227 124 TEEHREKITQASIVFVNNFAFGPT---VDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~~~~---~~~~l~e~~r~LkpGG~~i~ 167 (268)
...++|+|+... .++ ....+.++...++||..+++
T Consensus 81 ------~~~~aDlVIeAV---pe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 81 ------ALAAADLVIEAA---SERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp ------GGGGCSEEEECC---CCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ------HhcCCCEEEEcC---CCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 123577887642 233 24567888889999988865
No 439
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=74.23 E-value=9.9 Score=32.85 Aligned_cols=76 Identities=17% Similarity=0.178 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---h-CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc-cc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---T-GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH-RE 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~-~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~-~~ 129 (268)
.+++||=.|+ +|.++..+++. . |..+|++++.++. ....+.+. . ...+++++.+|+.+... ..
T Consensus 20 ~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~--~~~~~~~~-------~--~~~~v~~~~~Dl~d~~~l~~ 87 (344)
T 2gn4_A 20 DNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDEL--KQSEMAME-------F--NDPRMRFFIGDVRDLERLNY 87 (344)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHH--HHHHHHHH-------H--CCTTEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChh--hHHHHHHH-------h--cCCCEEEEECCCCCHHHHHH
Confidence 4678998885 57777777654 3 6545999999863 22211111 1 12479999999998542 11
Q ss_pred cccceEEEEEecc
Q psy17227 130 KITQASIVFVNNF 142 (268)
Q Consensus 130 ~~~d~dvv~~~~~ 142 (268)
-...+|+|+.++.
T Consensus 88 ~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 88 ALEGVDICIHAAA 100 (344)
T ss_dssp HTTTCSEEEECCC
T ss_pred HHhcCCEEEECCC
Confidence 1224677776554
No 440
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.03 E-value=8.9 Score=33.02 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=48.9
Q ss_pred CEEEEEcCCC-CHHHHHHHHHhCCc-EEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccce
Q psy17227 57 DVFVDLGSGV-GQVVLQVAAATGCK-ICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQA 134 (268)
Q Consensus 57 ~~vLDiGCG~-G~~~~~la~~~~~~-~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~ 134 (268)
++|.=||+|. |..........|.. .|++.|.++. .++. +. ..|. +.-...|..++ -..++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~--~~~~----a~----~~G~----~~~~~~~~~~~----~~~~a 95 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE--SISK----AV----DLGI----IDEGTTSIAKV----EDFSP 95 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH--HHHH----HH----HTTS----CSEEESCTTGG----GGGCC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH--HHHH----HH----HCCC----cchhcCCHHHH----hhccC
Confidence 6899999864 22222222334652 5999999974 2221 11 1221 11122333220 12356
Q ss_pred EEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 135 SIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 135 dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+|+.... .......+.++...++||..++..
T Consensus 96 DvVilavp--~~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 96 DFVMLSSP--VRTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp SEEEECSC--GGGHHHHHHHHHHHSCTTCEEEEC
T ss_pred CEEEEeCC--HHHHHHHHHHHhhccCCCcEEEEC
Confidence 77776422 223566778888889999877743
No 441
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=74.00 E-value=15 Score=31.88 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=54.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcC-CCCCc-cccc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD-FLTEE-HREK 130 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD-~~~l~-~~~~ 130 (268)
+++||=.|+ +|.++..+++. .|.. |++++.++.... + +.+. ...+++++.+| +.+.. ...-
T Consensus 5 ~~~ilVtGa-tG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~-~---~~l~--------~~~~v~~v~~D~l~d~~~l~~~ 70 (352)
T 1xgk_A 5 KKTIAVVGA-TGRQGASLIRVAAAVGHH-VRAQVHSLKGLI-A---EELQ--------AIPNVTLFQGPLLNNVPLMDTL 70 (352)
T ss_dssp CCCEEEEST-TSHHHHHHHHHHHHTTCC-EEEEESCSCSHH-H---HHHH--------TSTTEEEEESCCTTCHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHhCCCE-EEEEECCCChhh-H---HHHh--------hcCCcEEEECCccCCHHHHHHH
Confidence 456887774 67777776654 3665 999998875211 0 1111 12378999999 87743 2111
Q ss_pred ccceEEEEEeccccCcCHHHHHHHHHhcCCC-C--cEEEEe
Q psy17227 131 ITQASIVFVNNFAFGPTVDHALKERFQDLKD-G--ARIVSS 168 (268)
Q Consensus 131 ~~d~dvv~~~~~~~~~~~~~~l~e~~r~Lkp-G--G~~i~~ 168 (268)
...+|+|+.+...+..+....-+.+.+.++. | ++||.+
T Consensus 71 ~~~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~ 111 (352)
T 1xgk_A 71 FEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYS 111 (352)
T ss_dssp HTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred HhcCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEe
Confidence 2346777765443323333333445444332 3 467644
No 442
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=73.55 E-value=14 Score=33.54 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCCHHHH-HHHHHhCCcEEEEEeCCCChhHHHHHHHH--------HHHHHHHhccccccEEEEEcCCCCC
Q psy17227 55 PDDVFVDLGSGVGQVVL-QVAAATGCKICWGVEKADLPAKYAEMHTV--------FKRWMQWYGKRHGEFRLVKGDFLTE 125 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~-~la~~~~~~~v~GiD~s~~~~~~a~~~~~--------~~~~~~~~~~~~~~i~~~~gD~~~l 125 (268)
.|.++-=||+|.=+... ....+.|.. |+|+|+++. +++..++. +.+..+. ....+++++.. |+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~-V~~~D~~~~--kv~~L~~g~~pi~epgl~~ll~~-~~~~g~l~~tt-d~--- 81 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVD-VLGVDINQQ--TIDKLQNGQISIEEPGLQEVYEE-VLSSGKLKVST-TP--- 81 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCE-EEEECSCHH--HHHHHHTTCCSSCCTTHHHHHHH-HHHTTCEEEES-SC---
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCE-EEEEECCHH--HHHHHHCCCCCcCCCCHHHHHHh-hcccCceEEeC-ch---
Confidence 46667778888644432 222234666 999999985 33332110 0000000 00023455532 32
Q ss_pred cccccccceEEEEEecc-cc------CcC---HHHHHHHHHhcCCCCcEEEEeCCCCC
Q psy17227 126 EHREKITQASIVFVNNF-AF------GPT---VDHALKERFQDLKDGARIVSSKSFCP 173 (268)
Q Consensus 126 ~~~~~~~d~dvv~~~~~-~~------~~~---~~~~l~e~~r~LkpGG~~i~~~~~~~ 173 (268)
.++|+|++... -. .+| .....+.+...|+||..+|...+..|
T Consensus 82 ------~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~p 133 (431)
T 3ojo_A 82 ------EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAP 133 (431)
T ss_dssp ------CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCT
T ss_pred ------hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCCh
Confidence 13566665322 11 122 45556788889999887775433433
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.29 E-value=12 Score=31.70 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCCHHHHHH---HHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQV---AAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~l---a~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
++++|+=||+| .++..+ ++.+|.. |++.|.++. ..+. +. ..| ++.+. ..++. +-.
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~-V~~~d~~~~--~~~~----~~----~~g-----~~~~~--~~~l~--~~l 213 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALGAN-VKVGARSSA--HLAR----IT----EMG-----LVPFH--TDELK--EHV 213 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTTCE-EEEEESSHH--HHHH----HH----HTT-----CEEEE--GGGHH--HHS
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCCCE-EEEEECCHH--HHHH----HH----HCC-----CeEEc--hhhHH--HHh
Confidence 67899999985 444444 3456775 999999863 1111 11 111 22221 11111 222
Q ss_pred cceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+.....+.-+ .+.+..+|||+.++-+
T Consensus 214 ~~aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 214 KDIDICINTIPSMILN-----QTVLSSMTPKTLILDL 245 (300)
T ss_dssp TTCSEEEECCSSCCBC-----HHHHTTSCTTCEEEEC
T ss_pred hCCCEEEECCChhhhC-----HHHHHhCCCCCEEEEE
Confidence 3567887654432222 2456789999988754
No 444
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=73.12 E-value=12 Score=31.78 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=50.5
Q ss_pred HHHHcCC-CCCCEEEEEcCCCCHHHHHH---HHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCC
Q psy17227 47 MIDQINA-TPDDVFVDLGSGVGQVVLQV---AAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDF 122 (268)
Q Consensus 47 ll~~l~~-~~~~~vLDiGCG~G~~~~~l---a~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~ 122 (268)
++...+. -+|++|+=||+| .++..+ ++.+|.. |++.|.++. ... .+. ..| ++... .
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G--~iG~~~a~~l~~~G~~-V~~~dr~~~--~~~----~~~----~~g-----~~~~~--~ 204 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLG--RVGMSVARKFAALGAK-VKVGARESD--LLA----RIA----EMG-----MEPFH--I 204 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCS--HHHHHHHHHHHHTTCE-EEEEESSHH--HHH----HHH----HTT-----SEEEE--G
T ss_pred HHHhcCCCCCCCEEEEEeeC--HHHHHHHHHHHhCCCE-EEEEECCHH--HHH----HHH----HCC-----CeecC--h
Confidence 3444443 368899999986 444443 4456774 999999863 111 111 112 22221 1
Q ss_pred CCCcccccccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.++. +-...+|+|+.....+.-+ .+.+..+|||+.++-+
T Consensus 205 ~~l~--~~l~~aDvVi~~~p~~~i~-----~~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 205 SKAA--QELRDVDVCINTIPALVVT-----ANVLAEMPSHTFVIDL 243 (293)
T ss_dssp GGHH--HHTTTCSEEEECCSSCCBC-----HHHHHHSCTTCEEEEC
T ss_pred hhHH--HHhcCCCEEEECCChHHhC-----HHHHHhcCCCCEEEEe
Confidence 1111 2223567887654332221 2355678999988854
No 445
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=73.08 E-value=8.9 Score=31.67 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=41.1
Q ss_pred EEEEEcCCCCHHHHHHHHHh-----CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-ccccc
Q psy17227 58 VFVDLGSGVGQVVLQVAAAT-----GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE-HREKI 131 (268)
Q Consensus 58 ~vLDiGCG~G~~~~~la~~~-----~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~-~~~~~ 131 (268)
+||=.| |+|.++..+++.. |. +|++++.++.. ... +. ..+++++.+|+.+.. +..-.
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~--~~~----l~---------~~~~~~~~~D~~d~~~l~~~~ 64 (287)
T 2jl1_A 2 SIAVTG-ATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEK--AST----LA---------DQGVEVRHGDYNQPESLQKAF 64 (287)
T ss_dssp CEEETT-TTSHHHHHHHHHHTTTSCGG-GEEEEESCTTT--THH----HH---------HTTCEEEECCTTCHHHHHHHT
T ss_pred eEEEEc-CCchHHHHHHHHHHHhCCCC-eEEEEEcCHHH--HhH----Hh---------hcCCeEEEeccCCHHHHHHHH
Confidence 355555 5788888887654 33 49999988741 111 11 136889999998754 21222
Q ss_pred cceEEEEEecc
Q psy17227 132 TQASIVFVNNF 142 (268)
Q Consensus 132 ~d~dvv~~~~~ 142 (268)
..+|+|+..+.
T Consensus 65 ~~~d~vi~~a~ 75 (287)
T 2jl1_A 65 AGVSKLLFISG 75 (287)
T ss_dssp TTCSEEEECCC
T ss_pred hcCCEEEEcCC
Confidence 24677775544
No 446
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=72.31 E-value=6.5 Score=36.02 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=53.5
Q ss_pred HHHHcC-CCCCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 47 MIDQIN-ATPDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 47 ll~~l~-~~~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+....+ .-.|++|+=+|+|. |......++.+|+. |++.|.+|. ...+ +. .. .+++ .++.
T Consensus 237 I~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~-Viv~d~dp~--~a~~----A~----~~-----G~~v--v~Le- 297 (464)
T 3n58_A 237 IRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGAR-VKVTEVDPI--CALQ----AA----MD-----GFEV--VTLD- 297 (464)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSHH--HHHH----HH----HT-----TCEE--CCHH-
T ss_pred HHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCE-EEEEeCCcc--hhhH----HH----hc-----Ccee--ccHH-
Confidence 433343 34789999999986 55555556667886 999999873 1111 00 01 2222 1221
Q ss_pred CcccccccceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 125 EEHREKITQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 125 l~~~~~~~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+-...+|+|+... .. ...+ .+.+..+|||++++-+
T Consensus 298 ----ElL~~ADIVv~at----gt-~~lI~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 298 ----DAASTADIVVTTT----GN-KDVITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp ----HHGGGCSEEEECC----SS-SSSBCHHHHHHSCTTEEEEEC
T ss_pred ----HHHhhCCEEEECC----CC-ccccCHHHHhcCCCCeEEEEc
Confidence 2223467776521 11 1123 5777889999998864
No 447
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=72.26 E-value=14 Score=31.23 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=21.8
Q ss_pred CEEEEEcCCCCHH--HHHHHHHhCCcEEEEEeCCCC
Q psy17227 57 DVFVDLGSGVGQV--VLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 57 ~~vLDiGCG~G~~--~~~la~~~~~~~v~GiD~s~~ 90 (268)
++|.=||+|.=+. +..++ ..|.. |+.+|.++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~-V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHT-VVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCE-EEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCe-EEEEECCHH
Confidence 5799999986332 33333 34665 999999975
No 448
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=72.21 E-value=4 Score=35.21 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCCCHHHHHHH---HHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVA---AATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la---~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|.+|.=||+| .++..+| +.+|.. |++.|.++.. . . +. .. .++. .+. . +-.
T Consensus 141 ~g~~vgIiG~G--~IG~~~A~~l~~~G~~-V~~~d~~~~~-~--~----~~----~~-----g~~~--~~l---~--ell 194 (307)
T 1wwk_A 141 EGKTIGIIGFG--RIGYQVAKIANALGMN-ILLYDPYPNE-E--R----AK----EV-----NGKF--VDL---E--TLL 194 (307)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCE-EEEECSSCCH-H--H----HH----HT-----TCEE--CCH---H--HHH
T ss_pred CCceEEEEccC--HHHHHHHHHHHHCCCE-EEEECCCCCh-h--h----Hh----hc-----Cccc--cCH---H--HHH
Confidence 47789889875 5554444 446776 9999999862 1 1 11 11 1222 122 1 112
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+..... .++....+ .+.+..+|||+.++-+
T Consensus 195 ~~aDvV~l~~p~-~~~t~~li~~~~l~~mk~ga~lin~ 231 (307)
T 1wwk_A 195 KESDVVTIHVPL-VESTYHLINEERLKLMKKTAILINT 231 (307)
T ss_dssp HHCSEEEECCCC-STTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred hhCCEEEEecCC-ChHHhhhcCHHHHhcCCCCeEEEEC
Confidence 246777764321 12222333 4567889999998854
No 449
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=71.33 E-value=29 Score=27.87 Aligned_cols=60 Identities=15% Similarity=0.114 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
+++++|=.|+ +|+++..+++. .|+. |+.++.++. ......+ .... ..++.++.+|+.+..
T Consensus 5 ~~k~vlVtGa-sggiG~~~a~~l~~~G~~-V~~~~r~~~--~~~~~~~-------~~~~-~~~~~~~~~D~~~~~ 67 (251)
T 1zk4_A 5 DGKVAIITGG-TLGIGLAIATKFVEEGAK-VMITGRHSD--VGEKAAK-------SVGT-PDQIQFFQHDSSDED 67 (251)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHH-------HHCC-TTTEEEEECCTTCHH
T ss_pred CCcEEEEeCC-CChHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHHHH-------Hhhc-cCceEEEECCCCCHH
Confidence 4577888886 56777666654 3665 899998863 2221111 1111 147999999998753
No 450
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=70.79 E-value=18 Score=29.66 Aligned_cols=77 Identities=12% Similarity=0.054 Sum_probs=44.8
Q ss_pred CCCEEEEEcCC-CCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSG-VGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG-~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.++++|=.|++ +|+++..+++. .|+. |+.++.++. .....+.+.+ . .+.+.++.+|+.+...-..
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~l~~---~----~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAER---LRPEAEKLAE---A----LGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCE-EEEEESCGG---GHHHHHHHHH---H----TTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHH---HHHHHHHHHH---h----cCCcEEEECCCCCHHHHHH
Confidence 46789999986 36666655543 3766 899998863 1111111111 1 1247889999988541111
Q ss_pred --------ccceEEEEEecc
Q psy17227 131 --------ITQASIVFVNNF 142 (268)
Q Consensus 131 --------~~d~dvv~~~~~ 142 (268)
....|+++.++-
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag 95 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIA 95 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 124678876654
No 451
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=70.72 E-value=4.4 Score=35.75 Aligned_cols=89 Identities=17% Similarity=0.266 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+| .++..+|+ .+|.. |++.|.++.....+. .. .++.. .+ +. +-.
T Consensus 163 ~gktvGIIG~G--~IG~~vA~~l~~~G~~-V~~~dr~~~~~~~~~----------~~-----g~~~~-~~---l~--ell 218 (351)
T 3jtm_A 163 EGKTIGTVGAG--RIGKLLLQRLKPFGCN-LLYHDRLQMAPELEK----------ET-----GAKFV-ED---LN--EML 218 (351)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGCCE-EEEECSSCCCHHHHH----------HH-----CCEEC-SC---HH--HHG
T ss_pred cCCEEeEEEeC--HHHHHHHHHHHHCCCE-EEEeCCCccCHHHHH----------hC-----CCeEc-CC---HH--HHH
Confidence 57899999886 44444444 46776 999999864211111 11 12221 12 21 222
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++.... .++....+ .+.+..||||+.||=+
T Consensus 219 ~~aDvV~l~~Pl-t~~t~~li~~~~l~~mk~gailIN~ 255 (351)
T 3jtm_A 219 PKCDVIVINMPL-TEKTRGMFNKELIGKLKKGVLIVNN 255 (351)
T ss_dssp GGCSEEEECSCC-CTTTTTCBSHHHHHHSCTTEEEEEC
T ss_pred hcCCEEEECCCC-CHHHHHhhcHHHHhcCCCCCEEEEC
Confidence 356788875332 22222233 5677889999988854
No 452
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=70.13 E-value=6.6 Score=34.33 Aligned_cols=87 Identities=23% Similarity=0.261 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCCCHHHHHHH---HHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVA---AATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la---~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+| .++..+| +.+|.. |++.|.++.. . . +. ..| ++. .+ +. +-.
T Consensus 164 ~g~tvgIIGlG--~IG~~vA~~l~~~G~~-V~~~d~~~~~-~--~----~~----~~g-----~~~--~~---l~--ell 217 (335)
T 2g76_A 164 NGKTLGILGLG--RIGREVATRMQSFGMK-TIGYDPIISP-E--V----SA----SFG-----VQQ--LP---LE--EIW 217 (335)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTTCE-EEEECSSSCH-H--H----HH----HTT-----CEE--CC---HH--HHG
T ss_pred CcCEEEEEeEC--HHHHHHHHHHHHCCCE-EEEECCCcch-h--h----hh----hcC-----cee--CC---HH--HHH
Confidence 57789999875 4544444 446766 9999998752 1 1 11 112 222 12 21 222
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++.... .++....+ .+.+..||||+.++-+
T Consensus 218 ~~aDvV~l~~P~-t~~t~~li~~~~l~~mk~gailIN~ 254 (335)
T 2g76_A 218 PLCDFITVHTPL-LPSTTGLLNDNTFAQCKKGVRVVNC 254 (335)
T ss_dssp GGCSEEEECCCC-CTTTTTSBCHHHHTTSCTTEEEEEC
T ss_pred hcCCEEEEecCC-CHHHHHhhCHHHHhhCCCCcEEEEC
Confidence 356778764321 22223333 5678899999988854
No 453
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=69.26 E-value=13 Score=29.97 Aligned_cols=77 Identities=10% Similarity=0.042 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHh---CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAAT---GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK- 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~---~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~- 130 (268)
.++++|=.|+ +|+++..+++.+ |.. |+.++.++. ......+.++ .. ..++.++.+|+.+...-..
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~----~~---~~~~~~~~~D~~~~~~~~~~ 78 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGAS-VVVSDINAD--AANHVVDEIQ----QL---GGQAFACRCDITSEQELSAL 78 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCE-EEEEESCHH--HHHHHHHHHH----HT---TCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCE-EEEEcCCHH--HHHHHHHHHH----Hh---CCceEEEEcCCCCHHHHHHH
Confidence 4577888884 577777777653 554 999999864 2222212221 11 2478899999987541111
Q ss_pred -------ccceEEEEEecc
Q psy17227 131 -------ITQASIVFVNNF 142 (268)
Q Consensus 131 -------~~d~dvv~~~~~ 142 (268)
....|+++.++.
T Consensus 79 ~~~~~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 79 ADFAISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 114677776544
No 454
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=68.33 E-value=18 Score=29.31 Aligned_cols=61 Identities=13% Similarity=0.101 Sum_probs=38.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.++++|=.|++ |+++..+++. .|+. |+.++.++. ......+.++ .. ..++.++.+|+.+..
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~l~----~~---~~~~~~~~~D~~~~~ 75 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGAR-VIIADLDEA--MATKAVEDLR----ME---GHDVSSVVMDVTNTE 75 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHHHHH----HT---TCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHHHHHHH----hc---CCceEEEEecCCCHH
Confidence 46788888864 7777666654 3665 999998863 2222222221 11 247999999998854
No 455
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=67.94 E-value=25 Score=28.31 Aligned_cols=77 Identities=16% Similarity=0.101 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCC-CChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKA-DLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.++++|=.|+ +|+++..+++. .|.. |+.++.+ +. ......+.++ .. ..++.++.+|+.+...-..
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~~-V~~~~r~~~~--~~~~~~~~~~----~~---~~~~~~~~~D~~~~~~~~~ 74 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGAK-VGLHGRKAPA--NIDETIASMR----AD---GGDAAFFAADLATSEACQQ 74 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCE-EEEEESSCCT--THHHHHHHHH----HT---TCEEEEEECCTTSHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCE-EEEECCCchh--hHHHHHHHHH----hc---CCceEEEECCCCCHHHHHH
Confidence 4577887775 57777766654 3665 8999988 54 2222222221 11 2478999999988541111
Q ss_pred --------ccceEEEEEecc
Q psy17227 131 --------ITQASIVFVNNF 142 (268)
Q Consensus 131 --------~~d~dvv~~~~~ 142 (268)
...+|+++.++.
T Consensus 75 ~~~~~~~~~g~id~vi~~Ag 94 (258)
T 3afn_B 75 LVDEFVAKFGGIDVLINNAG 94 (258)
T ss_dssp HHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 114677776654
No 456
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=67.87 E-value=4.3 Score=45.08 Aligned_cols=100 Identities=14% Similarity=0.234 Sum_probs=60.4
Q ss_pred HHcCCCCCCEEEEEcC--CCCHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhc-cccccEEEEEcCCCCC
Q psy17227 49 DQINATPDDVFVDLGS--GVGQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYG-KRHGEFRLVKGDFLTE 125 (268)
Q Consensus 49 ~~l~~~~~~~vLDiGC--G~G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~i~~~~gD~~~l 125 (268)
...++++|++||=.|. |.|.+++.+|+..|+. |++++.++. +.. .+++ ..+ ..... ++ |..+.
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~-Viat~~s~~--k~~----~l~~---~~~~lga~~--v~--~~~~~ 1726 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCR-VFTTVGSAE--KRA----YLQA---RFPQLDETC--FA--NSRDT 1726 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHH--HHH----HHHH---HCTTCCSTT--EE--ESSSS
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCE-EEEEeCChh--hhH----HHHh---hcCCCCceE--Ee--cCCCH
Confidence 4457899999999974 6788899999998986 899998864 111 1111 110 11111 12 12222
Q ss_pred ccccc------ccceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 126 EHREK------ITQASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 126 ~~~~~------~~d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+.+. ...+|+|+- .. . ...+...++.|+|||+++..
T Consensus 1727 ~~~~~i~~~t~g~GvDvVld-~~--g---~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1727 SFEQHVLRHTAGKGVDLVLN-SL--A---EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp HHHHHHHHTTTSCCEEEEEE-CC--C---HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCceEEEE-CC--C---chHHHHHHHhcCCCcEEEEe
Confidence 21111 113677764 22 1 45688889999999999875
No 457
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=67.85 E-value=4.6 Score=39.41 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=37.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhC-----CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATG-----CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT 124 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~-----~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~ 124 (268)
+..+||||=||.|+++.-+-+..+ ...+.++|+++. |.+.++. ..+...+.++|+.+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~------A~~Ty~~-------Nhp~~~~~~~di~~ 272 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSF------ACQSLKY-------NHPQTEVRNEKADE 272 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHH------HHHHHHH-------HCTTSEEEESCHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHH------HHHHHHH-------HCCCCceecCcHHH
Confidence 346899999999999876644321 445799999985 2222221 13466777887754
No 458
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=67.79 E-value=20 Score=30.82 Aligned_cols=71 Identities=11% Similarity=0.219 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHHh----CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC-CCcc-cc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAAT----GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL-TEEH-RE 129 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~----~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~-~l~~-~~ 129 (268)
+++||=.| |+|.++..+++.. |. +|++++.++.. ... + ....+++++.+|+. +... ..
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~-~V~~~~r~~~~--~~~----~--------~~~~~v~~~~~Dl~~d~~~~~~ 87 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDW-EVFGMDMQTDR--LGD----L--------VKHERMHFFEGDITINKEWVEY 87 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSC-EEEEEESCCTT--TGG----G--------GGSTTEEEEECCTTTCHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCC-EEEEEeCChhh--hhh----h--------ccCCCeEEEeCccCCCHHHHHH
Confidence 46899888 5688877776643 45 49999998741 111 0 01258999999998 5431 11
Q ss_pred cccceEEEEEecc
Q psy17227 130 KITQASIVFVNNF 142 (268)
Q Consensus 130 ~~~d~dvv~~~~~ 142 (268)
-...+|+|+..+.
T Consensus 88 ~~~~~d~Vih~A~ 100 (372)
T 3slg_A 88 HVKKCDVILPLVA 100 (372)
T ss_dssp HHHHCSEEEECBC
T ss_pred HhccCCEEEEcCc
Confidence 1124677775433
No 459
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=67.57 E-value=8.8 Score=31.64 Aligned_cols=66 Identities=11% Similarity=0.106 Sum_probs=39.6
Q ss_pred EEEEcCCCCHHHHHHHHHh-----CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-cccccc
Q psy17227 59 FVDLGSGVGQVVLQVAAAT-----GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE-HREKIT 132 (268)
Q Consensus 59 vLDiGCG~G~~~~~la~~~-----~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~-~~~~~~ 132 (268)
||=.| |+|.++..+++.. |. .|++++.++... .. +. ..+++++.+|+.+.. +..-..
T Consensus 2 ilVtG-atG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~--~~----~~---------~~~~~~~~~D~~d~~~~~~~~~ 64 (286)
T 2zcu_A 2 IAITG-ATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKA--QA----LA---------AQGITVRQADYGDEAALTSALQ 64 (286)
T ss_dssp EEEES-TTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTC--HH----HH---------HTTCEEEECCTTCHHHHHHHTT
T ss_pred EEEEc-CCchHHHHHHHHHHhhCCCc-eEEEEEcChHhh--hh----hh---------cCCCeEEEcCCCCHHHHHHHHh
Confidence 45556 5688888887654 44 499999887421 11 11 136889999998754 212222
Q ss_pred ceEEEEEec
Q psy17227 133 QASIVFVNN 141 (268)
Q Consensus 133 d~dvv~~~~ 141 (268)
.+|+|+..+
T Consensus 65 ~~d~vi~~a 73 (286)
T 2zcu_A 65 GVEKLLLIS 73 (286)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEeC
Confidence 456776543
No 460
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=67.46 E-value=22 Score=27.98 Aligned_cols=67 Identities=9% Similarity=0.003 Sum_probs=44.2
Q ss_pred CEEEEEcCCCCHHHHHHHHHh---CCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCC-Cc-ccccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAAT---GCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLT-EE-HREKI 131 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~---~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~-l~-~~~~~ 131 (268)
++||=.| |+|.++..+++.. |. +|++++.++. .. ....+++++.+|+.+ .. +..-.
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~--~~---------------~~~~~~~~~~~D~~d~~~~~~~~~ 61 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLSTTDY-QIYAGARKVE--QV---------------PQYNNVKAVHFDVDWTPEEMAKQL 61 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTTSSC-EEEEEESSGG--GS---------------CCCTTEEEEECCTTSCHHHHHTTT
T ss_pred CeEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEECCcc--ch---------------hhcCCceEEEecccCCHHHHHHHH
Confidence 3677777 4688888888764 44 5999999874 10 012579999999998 43 22223
Q ss_pred cceEEEEEecc
Q psy17227 132 TQASIVFVNNF 142 (268)
Q Consensus 132 ~d~dvv~~~~~ 142 (268)
..+|+|+.++.
T Consensus 62 ~~~d~vi~~ag 72 (219)
T 3dqp_A 62 HGMDAIINVSG 72 (219)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 35677876554
No 461
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=67.17 E-value=13 Score=30.76 Aligned_cols=88 Identities=14% Similarity=0.017 Sum_probs=44.6
Q ss_pred EEEEEcCCCCH-HHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccceEE
Q psy17227 58 VFVDLGSGVGQ-VVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQASI 136 (268)
Q Consensus 58 ~vLDiGCG~G~-~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~dv 136 (268)
+|.=||||.=+ .........|.. |+++|.++. .... +. ..|.. .. ...|..+ - .++|+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~-V~~~~~~~~--~~~~----~~----~~g~~---~~-~~~~~~~-----~-~~~D~ 60 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHY-LIGVSRQQS--TCEK----AV----ERQLV---DE-AGQDLSL-----L-QTAKI 60 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH--HHHH----HH----HTTSC---SE-EESCGGG-----G-TTCSE
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCE-EEEEECCHH--HHHH----HH----hCCCC---cc-ccCCHHH-----h-CCCCE
Confidence 57778886522 222222234664 999999864 2211 11 12211 01 1223222 1 35677
Q ss_pred EEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 137 VFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 137 v~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|++... .......+.++...++||..++..
T Consensus 61 vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 61 IFLCTP--IQLILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp EEECSC--HHHHHHHHHHHGGGSCTTCEEEEC
T ss_pred EEEECC--HHHHHHHHHHHHhhCCCCCEEEEC
Confidence 776422 123455667777788998877653
No 462
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=67.15 E-value=20 Score=28.00 Aligned_cols=93 Identities=10% Similarity=0.116 Sum_probs=53.1
Q ss_pred CEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 57 DVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
++||=.|+ +|.++..+++. .|.. |++++.++. .... .. .+++++.+|+.+... .....
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~~-V~~~~R~~~--~~~~-------------~~-~~~~~~~~D~~d~~~-~~~~~ 61 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGHE-VTAIVRNAG--KITQ-------------TH-KDINILQKDIFDLTL-SDLSD 61 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCE-EEEEESCSH--HHHH-------------HC-SSSEEEECCGGGCCH-HHHTT
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCCE-EEEEEcCch--hhhh-------------cc-CCCeEEeccccChhh-hhhcC
Confidence 35776774 46666655543 4655 999999874 1111 11 478999999987653 22335
Q ss_pred eEEEEEeccccCc---CHHHHHHHHHhcCCC--CcEEEEe
Q psy17227 134 ASIVFVNNFAFGP---TVDHALKERFQDLKD--GARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~---~~~~~l~e~~r~Lkp--GG~~i~~ 168 (268)
+|+|+.+...... ........+.+.++. +++++..
T Consensus 62 ~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 62 QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 6777765443211 123334555554443 4677754
No 463
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=66.84 E-value=27 Score=31.62 Aligned_cols=105 Identities=14% Similarity=0.161 Sum_probs=50.3
Q ss_pred CEEEEEcCCCCHHHHH-HHHHhCCcEEEEEeCCCChhHHHHHHHH--------HHHHHHHhccccccEEEEEcCCCCCcc
Q psy17227 57 DVFVDLGSGVGQVVLQ-VAAATGCKICWGVEKADLPAKYAEMHTV--------FKRWMQWYGKRHGEFRLVKGDFLTEEH 127 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~-la~~~~~~~v~GiD~s~~~~~~a~~~~~--------~~~~~~~~~~~~~~i~~~~gD~~~l~~ 127 (268)
++|.=||+|.=+.... .....|.. |+++|.++. .++..++. ..+..+. ....+++++. .|..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~-V~~~D~~~~--~v~~l~~g~~~i~e~gl~~~l~~-~~~~~~l~~t-~d~~---- 73 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGAN-VRCIDTDRN--KIEQLNSGTIPIYEPGLEKMIAR-NVKAGRLRFG-TEIE---- 73 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH--HHHHHHHTCSCCCSTTHHHHHHH-HHHTTSEEEE-SCHH----
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCE-EEEEECCHH--HHHHHHcCCCcccCCCHHHHHHh-hcccCcEEEE-CCHH----
Confidence 4677788864333221 11234665 999999975 33222110 0000000 0001234432 2221
Q ss_pred cccccceEEEEEecccc-----Cc---CHHHHHHHHHhcCCCCcEEEEeCCC
Q psy17227 128 REKITQASIVFVNNFAF-----GP---TVDHALKERFQDLKDGARIVSSKSF 171 (268)
Q Consensus 128 ~~~~~d~dvv~~~~~~~-----~~---~~~~~l~e~~r~LkpGG~~i~~~~~ 171 (268)
+-..++|+|++...-. .+ ....+++.+...|++|..++...+.
T Consensus 74 -ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 74 -QAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp -HHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred -HHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 1123567777642211 11 3566677888889998777764333
No 464
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.81 E-value=19 Score=28.83 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccE-EEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEF-RLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i-~~~~gD~~~l~~~~~ 130 (268)
.+++||=.|+ +|.++..+++. .|.. |++++.++. .... +. ..++ +++.+|+. -.....
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~-V~~~~R~~~--~~~~----~~---------~~~~~~~~~~Dl~-~~~~~~ 81 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHE-PVAMVRNEE--QGPE----LR---------ERGASDIVVANLE-EDFSHA 81 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCE-EEEEESSGG--GHHH----HH---------HTTCSEEEECCTT-SCCGGG
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCe-EEEEECChH--HHHH----HH---------hCCCceEEEcccH-HHHHHH
Confidence 4788998885 57776666654 3665 999999875 2211 11 1367 89999997 222233
Q ss_pred ccceEEEEEecc
Q psy17227 131 ITQASIVFVNNF 142 (268)
Q Consensus 131 ~~d~dvv~~~~~ 142 (268)
...+|+|+.++.
T Consensus 82 ~~~~D~vi~~ag 93 (236)
T 3e8x_A 82 FASIDAVVFAAG 93 (236)
T ss_dssp GTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 335678876654
No 465
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=66.26 E-value=21 Score=30.32 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhcc-ccccEEEEEcCCCCCcc-cc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGK-RHGEFRLVKGDFLTEEH-RE 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~i~~~~gD~~~l~~-~~ 129 (268)
.+++||=.|+ +|.++..+++. .|.. |++++.++....- ....+.. ..+. ...+++++.+|+.+... ..
T Consensus 24 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGV-AGFIGSNLLEKLLKLNQV-VIGLDNFSTGHQY--NLDEVKT---LVSTEQWSRFCFIEGDIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHHTTCE-EEEEECCSSCCHH--HHHHHHH---TSCHHHHTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEECC-CcHHHHHHHHHHHHCCCE-EEEEeCCCCCchh--hhhhhhh---ccccccCCceEEEEccCCCHHHHHH
Confidence 3578998884 57777777654 3554 9999997642111 1111111 0000 01589999999988542 12
Q ss_pred cccceEEEEEecc
Q psy17227 130 KITQASIVFVNNF 142 (268)
Q Consensus 130 ~~~d~dvv~~~~~ 142 (268)
-...+|+|+..+.
T Consensus 97 ~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 97 VMKGVDHVLHQAA 109 (351)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhcCCCEEEECCc
Confidence 2224677775543
No 466
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=66.23 E-value=17 Score=33.37 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=23.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
..++|.=||+|. |..........|.. |+++|+++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~-V~~~d~~~~ 42 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHD-VFCLDVDQA 42 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCE-EEEEECCHH
Confidence 357899999985 33322222335665 999999974
No 467
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=66.12 E-value=31 Score=27.95 Aligned_cols=61 Identities=23% Similarity=0.107 Sum_probs=36.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeC-CCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEK-ADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.++++|=.|+ +|+++..+++. .|+. |+.++. ++. ......+.++ .. ..++.++.+|+.+..
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~~-V~~~~r~~~~--~~~~~~~~l~----~~---~~~~~~~~~D~~~~~ 70 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKAK-VVVNYRSKED--EANSVLEEIK----KV---GGEAIAVKGDVTVES 70 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCE-EEEEESSCHH--HHHHHHHHHH----HT---TCEEEEEECCTTSHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCE-EEEEcCCChH--HHHHHHHHHH----hc---CCceEEEECCCCCHH
Confidence 3567888885 47777666654 3665 899998 432 2222112221 11 247889999998754
No 468
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=66.07 E-value=6 Score=39.93 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=28.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHhCC-cEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAATGC-KICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GiD~s~~ 90 (268)
+..+++||=||.|+++.-+.+ .|. ..+.++|+++.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~-AG~~~vv~avEid~~ 574 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQ-AGISDTLWAIEMWDP 574 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHH-HTSEEEEEEECSSHH
T ss_pred CCCeEEEeccCccHHHHHHHH-CCCCceEEEEECCHH
Confidence 345799999999999986644 576 55889999985
No 469
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=65.86 E-value=28 Score=28.49 Aligned_cols=77 Identities=10% Similarity=-0.023 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~- 129 (268)
.++++|=.|++. |+++..+++. .|+. |+.++.++. .....+.+.+ . .+...++.+|+.+...-.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~l~~---~----~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDK---LKGRVEEFAA---Q----LGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTT---THHHHHHHHH---H----TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEcCcHH---HHHHHHHHHH---h----cCCcEEEEccCCCHHHHHH
Confidence 467899999752 6666666654 3665 899998862 1111111111 1 123478899998753111
Q ss_pred -------cccceEEEEEecc
Q psy17227 130 -------KITQASIVFVNNF 142 (268)
Q Consensus 130 -------~~~d~dvv~~~~~ 142 (268)
.....|+++.++-
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag 96 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIG 96 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 1124688877654
No 470
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=65.58 E-value=6.2 Score=34.34 Aligned_cols=89 Identities=22% Similarity=0.288 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|++|.=||+|. |......++.+|.. |+|.|.++.... ...-.+...++. +-..+
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~-V~~~dr~~~~~~------------------~~~~~~~~~~l~-----ell~~ 191 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMH-VIGVNTTGHPAD------------------HFHETVAFTATA-----DALAT 191 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSCCCCT------------------TCSEEEEGGGCH-----HHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCE-EEEECCCcchhH------------------hHhhccccCCHH-----HHHhh
Confidence 477899998864 33333444557886 999999874100 001112112221 22234
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++.... .++....+ .+.+..||||..||=+
T Consensus 192 aDvV~l~lPl-t~~t~~li~~~~l~~mk~gailIN~ 226 (324)
T 3evt_A 192 ANFIVNALPL-TPTTHHLFSTELFQQTKQQPMLINI 226 (324)
T ss_dssp CSEEEECCCC-CGGGTTCBSHHHHHTCCSCCEEEEC
T ss_pred CCEEEEcCCC-chHHHHhcCHHHHhcCCCCCEEEEc
Confidence 6788764321 22222223 5677889999998854
No 471
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=65.54 E-value=34 Score=28.36 Aligned_cols=77 Identities=12% Similarity=0.017 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.++++|=.|++. |+++..+++. .|+. |+.++.++. .....+.+.+ . .+++.++.+|+.+...-..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~l~~---~----~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQ-LAFTYATPK---LEKRVREIAK---G----FGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEESSGG---GHHHHHHHHH---H----TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHHH---h----cCCeEEEEcCCCCHHHHHH
Confidence 467899999863 6666666554 3665 899998863 1111111211 1 1247789999988541111
Q ss_pred --------ccceEEEEEecc
Q psy17227 131 --------ITQASIVFVNNF 142 (268)
Q Consensus 131 --------~~d~dvv~~~~~ 142 (268)
....|+++.++-
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag 108 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIA 108 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 124577776654
No 472
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.48 E-value=27 Score=28.46 Aligned_cols=79 Identities=10% Similarity=-0.050 Sum_probs=46.3
Q ss_pred CCCCCEEEEEcCC-CCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 53 ATPDDVFVDLGSG-VGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 53 ~~~~~~vLDiGCG-~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
..++++||=.|++ +|+++..+|+. .|+. |+.++.++.. .....+ + ... .+++.++.+|+.+..--
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~-V~~~~r~~~~--~~~~~~-~---~~~----~~~~~~~~~Dv~~~~~v 79 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRF--KDRITE-F---AAE----FGSELVFPCDVADDAQI 79 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGG--HHHHHH-H---HHH----TTCCCEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC-EEEEecchhh--HHHHHH-H---HHH----cCCcEEEECCCCCHHHH
Confidence 3467889999974 46666655554 4665 8999988531 111111 1 111 23588999999985411
Q ss_pred c--------cccceEEEEEecc
Q psy17227 129 E--------KITQASIVFVNNF 142 (268)
Q Consensus 129 ~--------~~~d~dvv~~~~~ 142 (268)
. .....|+++.++-
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAg 101 (271)
T 3ek2_A 80 DALFASLKTHWDSLDGLVHSIG 101 (271)
T ss_dssp HHHHHHHHHHCSCEEEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCc
Confidence 1 1124678776654
No 473
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=65.42 E-value=2.7 Score=38.34 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=29.5
Q ss_pred HHHHHcCCC-CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 46 RMIDQINAT-PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 46 ~ll~~l~~~-~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
.+....+.. .|.+|.=+|+|. |......++.+|.. |++.|.++.
T Consensus 200 gi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~-Viv~D~~p~ 245 (436)
T 3h9u_A 200 GIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGAR-VVVTEVDPI 245 (436)
T ss_dssp HHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHH
T ss_pred HHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEECCChh
Confidence 344434433 688999999875 44444455567886 999999873
No 474
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=65.39 E-value=21 Score=29.42 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=38.6
Q ss_pred CCCEEEEEcC-CCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc
Q psy17227 55 PDDVFVDLGS-GVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE 126 (268)
Q Consensus 55 ~~~~vLDiGC-G~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~ 126 (268)
.++++|=.|+ |+|+++..+|+. .|+. |+.++.++. ... +... ... ..++.++.+|+.+..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~-V~~~~r~~~--~~~---~~~~---~~~---~~~~~~~~~Dv~~~~ 69 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRL--RLI---QRIT---DRL---PAKAPLLELDVQNEE 69 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEECSCH--HHH---HHHH---TTS---SSCCCEEECCTTCHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecChH--HHH---HHHH---Hhc---CCCceEEEccCCCHH
Confidence 4678999998 477777777664 3665 899998873 110 1111 111 236788999998854
No 475
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.24 E-value=8.7 Score=35.06 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=43.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHHhC--CcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcc--cccc
Q psy17227 56 DDVFVDLGSGVGQVVLQVAAATG--CKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEH--REKI 131 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~la~~~~--~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~--~~~~ 131 (268)
.|+|+=+|| |.++..+|+..- ...|+.||.+++ .+.+ +.. .-.+..++||..+... ..+.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~--~~~~----~~~--------~~~~~~i~Gd~~~~~~L~~Agi 66 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGD--RLRE----LQD--------KYDLRVVNGHASHPDVLHEAGA 66 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHH--HHHH----HHH--------HSSCEEEESCTTCHHHHHHHTT
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHH--HHHH----HHH--------hcCcEEEEEcCCCHHHHHhcCC
Confidence 466776666 678888888652 235999999985 2221 111 1257899999998652 2234
Q ss_pred cceEEEEE
Q psy17227 132 TQASIVFV 139 (268)
Q Consensus 132 ~d~dvv~~ 139 (268)
.++|++++
T Consensus 67 ~~ad~~ia 74 (461)
T 4g65_A 67 QDADMLVA 74 (461)
T ss_dssp TTCSEEEE
T ss_pred CcCCEEEE
Confidence 56777664
No 476
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=65.05 E-value=37 Score=27.69 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEE-eCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGV-EKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~Gi-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~ 130 (268)
.++++|=.|++ |+++..+|+. .|+. |+.+ +.++. ......+.++ . ...++.++.+|+.+..--..
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~-V~~~~~~~~~--~~~~~~~~~~----~---~~~~~~~~~~Dv~~~~~v~~ 75 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGAN-VVLTYNGAAE--GAATAVAEIE----K---LGRSALAIKADLTNAAEVEA 75 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEECSSCH--HHHHHHHHHH----T---TTSCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCE-EEEEcCCCHH--HHHHHHHHHH----h---cCCceEEEEcCCCCHHHHHH
Confidence 46788988876 4555555543 3666 7777 55543 2222212221 1 12478999999998541111
Q ss_pred --------ccceEEEEEec
Q psy17227 131 --------ITQASIVFVNN 141 (268)
Q Consensus 131 --------~~d~dvv~~~~ 141 (268)
....|+++.++
T Consensus 76 ~~~~~~~~~g~id~lv~nA 94 (259)
T 3edm_A 76 AISAAADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHHHHHCSEEEEEECC
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 12467777665
No 477
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=64.94 E-value=58 Score=26.82 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=60.1
Q ss_pred HHHHcCCCCCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCC
Q psy17227 47 MIDQINATPDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFL 123 (268)
Q Consensus 47 ll~~l~~~~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~ 123 (268)
++..+.+ .++++|=.|++ |+++..+|+. .|+. |+.++.+.. .......+.++ .. ..++.++.+|+.
T Consensus 23 mm~~~~l-~gk~~lVTGas-~GIG~aia~~la~~G~~-V~~~~~~~~-~~~~~~~~~l~----~~---~~~~~~~~~Dv~ 91 (271)
T 3v2g_A 23 MMTSISL-AGKTAFVTGGS-RGIGAAIAKRLALEGAA-VALTYVNAA-ERAQAVVSEIE----QA---GGRAVAIRADNR 91 (271)
T ss_dssp HHTTTCC-TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEESSCH-HHHHHHHHHHH----HT---TCCEEEEECCTT
T ss_pred hccccCC-CCCEEEEeCCC-cHHHHHHHHHHHHCCCE-EEEEeCCCH-HHHHHHHHHHH----hc---CCcEEEEECCCC
Confidence 4444433 56789999976 5555555544 3665 888877652 12221112221 11 247899999998
Q ss_pred CCcccc--------cccceEEEEEeccccCc---------CHHH-----------HHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHRE--------KITQASIVFVNNFAFGP---------TVDH-----------ALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~--------~~~d~dvv~~~~~~~~~---------~~~~-----------~l~e~~r~LkpGG~~i~~ 168 (268)
+..--. .....|+++.++-.... ++.. ..+.+.+.++++|++|..
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 92 DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 854111 11246777766532111 1111 124445677888988865
No 478
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=64.66 E-value=59 Score=28.00 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCCHHHHHH-HHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHH---Hhcccc---------ccEEEEEcCC
Q psy17227 56 DDVFVDLGSGVGQVVLQV-AAATGCKICWGVEKADLPAKYAEMHTVFKRWMQ---WYGKRH---------GEFRLVKGDF 122 (268)
Q Consensus 56 ~~~vLDiGCG~G~~~~~l-a~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~---~~~~~~---------~~i~~~~gD~ 122 (268)
..+|-=||+|+=+..+.. ....|.. |+-.|++++. ++++.+++++... ..+... .++++. .|+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~~~~--l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l 81 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQ--ITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHH--HHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECCHHH--HHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cch
Confidence 457899999865443322 2335777 9999999863 3333333332211 111100 123332 121
Q ss_pred CCCcccccccceEEEEEeccccCcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 123 LTEEHREKITQASIVFVNNFAFGPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 123 ~~l~~~~~~~d~dvv~~~~~~~~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
.+...++|+|+ +++.-..+ ....|+++-++++|+..|.++
T Consensus 82 -----~~a~~~ad~Vi-Eav~E~l~iK~~lf~~l~~~~~~~aIlaSN 122 (319)
T 3ado_A 82 -----AEAVEGVVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp -----HHHTTTEEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred -----HhHhccCcEEe-eccccHHHHHHHHHHHHHHHhhhcceeehh
Confidence 12234566654 54422223 455678888899999998876
No 479
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.50 E-value=57 Score=26.71 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCC----------hhHHHHHHHHHHHHHHHhccccccEEEEEcC
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADL----------PAKYAEMHTVFKRWMQWYGKRHGEFRLVKGD 121 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~----------~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD 121 (268)
.++++|=.|++ |+++..+|+. .|+. |+.+|.++. ...+.+..+.+. .. ..++.++.+|
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~D 82 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGAD-IIAVDLCDQIASVPYPLATPEELAATVKLVE----DI---GSRIVARQAD 82 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHH----HH---TCCEEEEECC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCe-EEEEecccccccccccccchHHHHHHHHHHH----hc---CCeEEEEeCC
Confidence 46789989965 5555555544 3666 899998731 122222222111 12 2479999999
Q ss_pred CCCCccccc--------ccceEEEEEecc
Q psy17227 122 FLTEEHREK--------ITQASIVFVNNF 142 (268)
Q Consensus 122 ~~~l~~~~~--------~~d~dvv~~~~~ 142 (268)
+.+..--.. ....|+++.++-
T Consensus 83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 83 VRDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 998541111 124677776654
No 480
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=64.22 E-value=21 Score=29.27 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccce
Q psy17227 56 DDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQA 134 (268)
Q Consensus 56 ~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d~ 134 (268)
+++|.=||||. |..........|...|+.+|.++. ...+ +.+ .. .+.. ..|..+ -..++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~--~~~~----~~~---~~-----g~~~-~~~~~~-----~~~~~ 69 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEE--SARE----LAQ---KV-----EAEY-TTDLAE-----VNPYA 69 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHH--HHHH----HHH---HT-----TCEE-ESCGGG-----SCSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHH--HHHH----HHH---Hc-----CCce-eCCHHH-----HhcCC
Confidence 45788899973 332222223346554788998864 2211 111 11 2222 223222 12246
Q ss_pred EEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 135 SIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 135 dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
|+|++... .......+.++...++||..++..
T Consensus 70 Dvvi~av~--~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 70 KLYIVSLK--DSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp SEEEECCC--HHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred CEEEEecC--HHHHHHHHHHHHhhcCCCcEEEEC
Confidence 77776422 112355566666778888877754
No 481
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=63.90 E-value=8.6 Score=33.06 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=59.3
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHhCC----cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-
Q psy17227 52 NATPDDVFVDLGSGVGQVVLQVAAATGC----KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE- 126 (268)
Q Consensus 52 ~~~~~~~vLDiGCG~G~~~~~la~~~~~----~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~- 126 (268)
+...+..|+=+|||.|.....+++.++. .+.+.+|.++....+. ...++.++..=+ +..
T Consensus 57 ~~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~---------------~~~NV~li~~fv-de~d 120 (307)
T 3mag_A 57 GILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILN---------------GLRDVTLVTRFV-DEEY 120 (307)
T ss_dssp TCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGT---------------TCTTEEEEECCC-CHHH
T ss_pred CCCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhc---------------CCCcEEEEeccC-CHHH
Confidence 4445789999999999999999987764 2689999988522211 135788877633 322
Q ss_pred ---ccccccceEEEEEecccc-----CcCHHHH------HHHHHhcCCCCcEEE
Q psy17227 127 ---HREKITQASIVFVNNFAF-----GPTVDHA------LKERFQDLKDGARIV 166 (268)
Q Consensus 127 ---~~~~~~d~dvv~~~~~~~-----~~~~~~~------l~e~~r~LkpGG~~i 166 (268)
+.....+.+++++..+-- .+.-... -..+...|||-.-.+
T Consensus 121 l~~l~~~~~~~~iLLISDIRS~r~~~ep~t~~ll~Dy~lQ~~w~~~LkP~aS~L 174 (307)
T 3mag_A 121 LRSIKKQLHPSKIILISDVRSKRGGNEPSTADLLSNYALQNVMISILNPVASSL 174 (307)
T ss_dssp HHHHHHHHTTSCEEEEECCCC------CCHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHhccCCCEEEEEEecCCCCCCCccHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 111112345676654411 1211122 244557899976655
No 482
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=63.32 E-value=28 Score=28.73 Aligned_cols=77 Identities=9% Similarity=-0.019 Sum_probs=45.2
Q ss_pred CCCEEEEEcCC-CCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-
Q psy17227 55 PDDVFVDLGSG-VGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE- 129 (268)
Q Consensus 55 ~~~~vLDiGCG-~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~- 129 (268)
.++++|=.|++ +|+++..+|+. .|+. |+.++.++. .....+.+.+ . .+++.++.+|+.+...-.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~l~~---~----~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNES---LEKRVRPIAQ---E----LNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTT---THHHHHHHHH---H----TTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHH---h----cCCcEEEEcCCCCHHHHHH
Confidence 46789999985 46676666654 3655 999998874 1111111211 1 124788999998853111
Q ss_pred -------cccceEEEEEecc
Q psy17227 130 -------KITQASIVFVNNF 142 (268)
Q Consensus 130 -------~~~d~dvv~~~~~ 142 (268)
.....|+++.++-
T Consensus 74 ~~~~~~~~~g~id~lv~nAg 93 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVA 93 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCc
Confidence 1124678876654
No 483
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=63.16 E-value=30 Score=29.32 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=42.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCc-ccc
Q psy17227 54 TPDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEE-HRE 129 (268)
Q Consensus 54 ~~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~-~~~ 129 (268)
.++++||=.|+ +|.++..+++. .|.. |++++.++. ..+++++.+|+.+.. +..
T Consensus 17 ~~~~~vlVtGa-tG~iG~~l~~~L~~~G~~-V~~~~r~~~---------------------~~~~~~~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 17 RGSHMILVTGS-AGRVGRAVVAALRTQGRT-VRGFDLRPS---------------------GTGGEEVVGSLEDGQALSD 73 (347)
T ss_dssp ----CEEEETT-TSHHHHHHHHHHHHTTCC-EEEEESSCC---------------------SSCCSEEESCTTCHHHHHH
T ss_pred cCCCEEEEECC-CChHHHHHHHHHHhCCCE-EEEEeCCCC---------------------CCCccEEecCcCCHHHHHH
Confidence 35678999984 68887777654 3665 999999874 136789999998854 212
Q ss_pred cccceEEEEEecc
Q psy17227 130 KITQASIVFVNNF 142 (268)
Q Consensus 130 ~~~d~dvv~~~~~ 142 (268)
-...+|+|+..+.
T Consensus 74 ~~~~~d~vih~A~ 86 (347)
T 4id9_A 74 AIMGVSAVLHLGA 86 (347)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHhCCCEEEECCc
Confidence 2235677775543
No 484
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=62.90 E-value=39 Score=27.55 Aligned_cols=80 Identities=13% Similarity=0.025 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccc-
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREK- 130 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~- 130 (268)
.++++|=.|++ |+++..+++. .|+. |+.++.++. ......+.+. .. ....++.++.+|+.+..--..
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~-V~~~~r~~~--~~~~~~~~l~----~~-~~~~~~~~~~~D~~~~~~v~~~ 76 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAK-VALVDWNLE--AGVQCKAALH----EQ-FEPQKTLFIQCDVADQQQLRDT 76 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHHHHT----TT-SCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCE-EEEEECCHH--HHHHHHHHHH----hh-cCCCceEEEecCCCCHHHHHHH
Confidence 46788988864 6666666554 3665 899998863 2221111111 00 012368999999987531111
Q ss_pred -------ccceEEEEEeccc
Q psy17227 131 -------ITQASIVFVNNFA 143 (268)
Q Consensus 131 -------~~d~dvv~~~~~~ 143 (268)
....|+++.++-.
T Consensus 77 ~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 77 FRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 1135777766543
No 485
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=62.88 E-value=1.4 Score=38.50 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCC
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADL 90 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~ 90 (268)
.|++|.=||+|. |......++.+|.. |++.|.++.
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~~ 174 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGMK-VLGVSRSGR 174 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCC
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCCE-EEEEcCChH
Confidence 477899999875 44444445567886 999999873
No 486
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=62.68 E-value=7.1 Score=33.68 Aligned_cols=87 Identities=16% Similarity=0.224 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+ |.++..+|+ .+|.. |++.|.++... . +. .. .+.. .+. . +-.
T Consensus 141 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~-V~~~d~~~~~~---~----~~----~~-----g~~~--~~l---~--ell 194 (313)
T 2ekl_A 141 AGKTIGIVGF--GRIGTKVGIIANAMGMK-VLAYDILDIRE---K----AE----KI-----NAKA--VSL---E--ELL 194 (313)
T ss_dssp TTCEEEEESC--SHHHHHHHHHHHHTTCE-EEEECSSCCHH---H----HH----HT-----TCEE--CCH---H--HHH
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCE-EEEECCCcchh---H----HH----hc-----Ccee--cCH---H--HHH
Confidence 5778888877 455554443 46776 99999998521 1 11 11 1222 122 1 112
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|+..... .++....+ .+.+..||||+.++-+
T Consensus 195 ~~aDvVvl~~P~-~~~t~~li~~~~l~~mk~ga~lIn~ 231 (313)
T 2ekl_A 195 KNSDVISLHVTV-SKDAKPIIDYPQFELMKDNVIIVNT 231 (313)
T ss_dssp HHCSEEEECCCC-CTTSCCSBCHHHHHHSCTTEEEEES
T ss_pred hhCCEEEEeccC-ChHHHHhhCHHHHhcCCCCCEEEEC
Confidence 246777764321 12222223 4566789999988854
No 487
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=62.24 E-value=5.4 Score=34.65 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+| .++..+|+ .+|.. |++.|.++.. ... +. . ..+.+. +. . +-.
T Consensus 154 ~g~~vgIIG~G--~iG~~iA~~l~~~G~~-V~~~d~~~~~--~~~----~~----~-----~g~~~~--~l---~--e~l 208 (330)
T 2gcg_A 154 TQSTVGIIGLG--RIGQAIARRLKPFGVQ-RFLYTGRQPR--PEE----AA----E-----FQAEFV--ST---P--ELA 208 (330)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGTCC-EEEEESSSCC--HHH----HH----T-----TTCEEC--CH---H--HHH
T ss_pred CCCEEEEECcC--HHHHHHHHHHHHCCCE-EEEECCCCcc--hhH----HH----h-----cCceeC--CH---H--HHH
Confidence 46789999885 45444443 45776 9999988741 111 11 0 122221 22 1 112
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
.++|+|++.... .++....+ .+.+..||||..++-+
T Consensus 209 ~~aDvVi~~vp~-~~~t~~~i~~~~~~~mk~gailIn~ 245 (330)
T 2gcg_A 209 AQSDFIVVACSL-TPATEGLCNKDFFQKMKETAVFINI 245 (330)
T ss_dssp HHCSEEEECCCC-CTTTTTCBSHHHHHHSCTTCEEEEC
T ss_pred hhCCEEEEeCCC-ChHHHHhhCHHHHhcCCCCcEEEEC
Confidence 246777764321 12222233 4667789999988754
No 488
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=62.15 E-value=30 Score=33.53 Aligned_cols=100 Identities=9% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CEEEEEcCCCCHH--HHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHH---hcc--------ccccEEEEEcCCC
Q psy17227 57 DVFVDLGSGVGQV--VLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQW---YGK--------RHGEFRLVKGDFL 123 (268)
Q Consensus 57 ~~vLDiGCG~G~~--~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~---~~~--------~~~~i~~~~gD~~ 123 (268)
++|-=||+|+=+. +..+ ...|.. |+.+|.++. .++++++.+++.... .|. ...++++. .|..
T Consensus 313 ~kV~VIGaG~MG~~iA~~l-a~aG~~-V~l~D~~~~--~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~ 387 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATAL-ILSNYP-VILKEVNEK--FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDYE 387 (725)
T ss_dssp CCEEEECCSHHHHHHHHHH-HTTTCC-EEEECSSHH--HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSSG
T ss_pred cEEEEEcCCHhhHHHHHHH-HhCCCE-EEEEECCHH--HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCHH
Confidence 3588899986322 2222 235776 999999986 333322222211100 010 01234432 2331
Q ss_pred CCcccccccceEEEEEeccccCcC-HHHHHHHHHhcCCCCcEEEEe
Q psy17227 124 TEEHREKITQASIVFVNNFAFGPT-VDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 124 ~l~~~~~~~d~dvv~~~~~~~~~~-~~~~l~e~~r~LkpGG~~i~~ 168 (268)
...++|+|+.... -..+ ....+.++...++|+..+++.
T Consensus 388 ------~~~~aDlVIeaVp-e~~~vk~~v~~~l~~~~~~~~Ilasn 426 (725)
T 2wtb_A 388 ------SFRDVDMVIEAVI-ENISLKQQIFADLEKYCPQHCILASN 426 (725)
T ss_dssp ------GGTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ------HHCCCCEEEEcCc-CCHHHHHHHHHHHHhhCCCCcEEEeC
Confidence 2236778776422 1111 244567777889998877653
No 489
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=62.02 E-value=64 Score=26.32 Aligned_cols=79 Identities=11% Similarity=0.015 Sum_probs=45.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHh---CCcEEEEEeCCCCh-hHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccc-
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAAT---GCKICWGVEKADLP-AKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHRE- 129 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~~---~~~~v~GiD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~- 129 (268)
.++++|=.|++ |+++..+|+.+ |+. |+.++.+..- ....+..+.+ +. ...++.++.+|+.+..--.
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~----~~---~~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVN-LVLHYHQAKDSDTANKLKDEL----ED---QGAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCE-EEEEESCGGGHHHHHHHHHHH----HT---TTCEEEEEECCCCSHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCE-EEEEecCccCHHHHHHHHHHH----Hh---cCCcEEEEECCCCCHHHHHH
Confidence 46788888876 66777777654 554 8888775421 1121111111 11 1347999999999854111
Q ss_pred -------cccceEEEEEecc
Q psy17227 130 -------KITQASIVFVNNF 142 (268)
Q Consensus 130 -------~~~d~dvv~~~~~ 142 (268)
.....|+++.++-
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 1124678776654
No 490
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=61.93 E-value=6 Score=34.76 Aligned_cols=87 Identities=21% Similarity=0.353 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|.+|.=||+|. |......++.+|.. |+|.|.++.. + . ...+.+. ++ . +-...
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~~-V~~~d~~~~~---~--------------~-~~~~~~~--~l---~--ell~~ 200 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGAK-VIAYDVAYNP---E--------------F-EPFLTYT--DF---D--TVLKE 200 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCCG---G--------------G-TTTCEEC--CH---H--HHHHH
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCCE-EEEECCChhh---h--------------h-hcccccc--CH---H--HHHhc
Confidence 377899998864 33333344557876 9999999751 0 0 0112221 22 1 22235
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++..... ++....+ .+.+..||||..||=+
T Consensus 201 aDvV~l~~Plt-~~t~~li~~~~l~~mk~gailIN~ 235 (343)
T 2yq5_A 201 ADIVSLHTPLF-PSTENMIGEKQLKEMKKSAYLINC 235 (343)
T ss_dssp CSEEEECCCCC-TTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred CCEEEEcCCCC-HHHHHHhhHHHHhhCCCCcEEEEC
Confidence 67888653321 2222222 5667889999999854
No 491
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=61.67 E-value=13 Score=32.46 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|++|.=||+|. |......++.+|.. |++.|.++.. ...... .. ++. +-...
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~~-V~~~dr~~~~--------------------~~~~~~-~~---sl~--ell~~ 222 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGMS-VRYWNRSTLS--------------------GVDWIA-HQ---SPV--DLARD 222 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSCCT--------------------TSCCEE-CS---SHH--HHHHT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCccc--------------------ccCcee-cC---CHH--HHHhc
Confidence 478899999864 33333333446775 9999998740 011111 11 111 22234
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++... ..++....+ .+.+..+|||..||-+
T Consensus 223 aDvVil~vP-~t~~t~~li~~~~l~~mk~gailIN~ 257 (340)
T 4dgs_A 223 SDVLAVCVA-ASAATQNIVDASLLQALGPEGIVVNV 257 (340)
T ss_dssp CSEEEECC-----------CHHHHHHTTTTCEEEEC
T ss_pred CCEEEEeCC-CCHHHHHHhhHHHHhcCCCCCEEEEC
Confidence 678876422 123334444 6777899999988854
No 492
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=61.54 E-value=5.1 Score=34.94 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH---hCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAAA---TGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~~---~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+| .++..+|+. +|.. |++.|.++.....+. .. .++. .+. . +-.
T Consensus 144 ~g~tvGIIG~G--~IG~~vA~~l~~~G~~-V~~~d~~~~~~~~~~----------~~-----g~~~--~~l---~--ell 198 (330)
T 4e5n_A 144 DNATVGFLGMG--AIGLAMADRLQGWGAT-LQYHEAKALDTQTEQ----------RL-----GLRQ--VAC---S--ELF 198 (330)
T ss_dssp TTCEEEEECCS--HHHHHHHHHTTTSCCE-EEEECSSCCCHHHHH----------HH-----TEEE--CCH---H--HHH
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHHCCCE-EEEECCCCCcHhHHH----------hc-----Ccee--CCH---H--HHH
Confidence 47789889875 555555554 5665 999999873111111 11 2222 122 1 212
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++.... .++....+ .+.+..||||+.||-+
T Consensus 199 ~~aDvV~l~~P~-t~~t~~li~~~~l~~mk~gailIN~ 235 (330)
T 4e5n_A 199 ASSDFILLALPL-NADTLHLVNAELLALVRPGALLVNP 235 (330)
T ss_dssp HHCSEEEECCCC-STTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred hhCCEEEEcCCC-CHHHHHHhCHHHHhhCCCCcEEEEC
Confidence 246777764331 12223333 5778999999998854
No 493
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=60.97 E-value=7.1 Score=35.10 Aligned_cols=33 Identities=12% Similarity=-0.108 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCHHHHHHHHHhC--CcE----EEEEeCCCC
Q psy17227 57 DVFVDLGSGVGQVVLQVAAATG--CKI----CWGVEKADL 90 (268)
Q Consensus 57 ~~vLDiGCG~G~~~~~la~~~~--~~~----v~GiD~s~~ 90 (268)
.+|+|+=||.|++...+-+ .| ... |.++|+++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~-aG~~~~~~~~~v~avEid~~ 49 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKN-IARSKNWEIQHSGMVEWFVD 49 (403)
T ss_dssp EEEEEETCTTCHHHHHHHH-HHHHHTEEEEEEEEECCBHH
T ss_pred ceEEEEecCcCHHHHHHHH-hCCccccceeeEEEEecCHH
Confidence 4899999999999876644 34 343 788999985
No 494
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=60.75 E-value=41 Score=28.14 Aligned_cols=79 Identities=11% Similarity=0.011 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCCC-HHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccc
Q psy17227 53 ATPDDVFVDLGSGVG-QVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHR 128 (268)
Q Consensus 53 ~~~~~~vLDiGCG~G-~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~ 128 (268)
.-.++++|=.|++.| +++..+|+ +.|+. |+.++.++. ..+. +++.... .+++.++.+|+.+..--
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r~~~---~~~~---~~~~~~~----~~~~~~~~~Dv~d~~~v 96 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQGDA---LKKR---VEPLAEE----LGAFVAGHCDVADAASI 96 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEECSHH---HHHH---HHHHHHH----HTCEEEEECCTTCHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHH---HHHH---HHHHHHh----cCCceEEECCCCCHHHH
Confidence 346788999997643 33333333 24766 888888852 1111 1111111 23688999999985411
Q ss_pred c--------cccceEEEEEecc
Q psy17227 129 E--------KITQASIVFVNNF 142 (268)
Q Consensus 129 ~--------~~~d~dvv~~~~~ 142 (268)
. .....|+++.++-
T Consensus 97 ~~~~~~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 97 DAVFETLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHhcCCCCEEEECCc
Confidence 1 1124677776654
No 495
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=60.75 E-value=33 Score=28.61 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=22.0
Q ss_pred ceEEEEEeccccCcCHHHHHHHHHhcCCCCcEEEEe
Q psy17227 133 QASIVFVNNFAFGPTVDHALKERFQDLKDGARIVSS 168 (268)
Q Consensus 133 d~dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~~ 168 (268)
++|+|++... .......+.++...++||..++..
T Consensus 74 ~~d~vi~~v~--~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 74 QVDLIIALTK--AQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCSEEEECSC--HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCCEEEEEec--cccHHHHHHHHHHhcCCCCEEEEe
Confidence 5677776422 223455667777788888887764
No 496
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=60.72 E-value=8.5 Score=34.13 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHH---HhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVAA---ATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la~---~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|.+|.=||.| .++..+|+ .+|.. |++.|.++.... +. .. .+.. .++ . +-.
T Consensus 175 ~gktvGIIGlG--~IG~~vA~~l~~fG~~-V~~~d~~~~~~~-------~~----~~-----g~~~--~~l---~--ell 228 (365)
T 4hy3_A 175 AGSEIGIVGFG--DLGKALRRVLSGFRAR-IRVFDPWLPRSM-------LE----EN-----GVEP--ASL---E--DVL 228 (365)
T ss_dssp SSSEEEEECCS--HHHHHHHHHHTTSCCE-EEEECSSSCHHH-------HH----HT-----TCEE--CCH---H--HHH
T ss_pred CCCEEEEecCC--cccHHHHHhhhhCCCE-EEEECCCCCHHH-------Hh----hc-----Ceee--CCH---H--HHH
Confidence 37788888875 55555554 45665 999998864111 11 11 2221 222 1 222
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++... ..++....+ .+.+..||||+.||=+
T Consensus 229 ~~aDvV~l~~P-lt~~T~~li~~~~l~~mk~gailIN~ 265 (365)
T 4hy3_A 229 TKSDFIFVVAA-VTSENKRFLGAEAFSSMRRGAAFILL 265 (365)
T ss_dssp HSCSEEEECSC-SSCC---CCCHHHHHTSCTTCEEEEC
T ss_pred hcCCEEEEcCc-CCHHHHhhcCHHHHhcCCCCcEEEEC
Confidence 34678876433 223333444 6778899999999854
No 497
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=60.64 E-value=20 Score=29.69 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=44.1
Q ss_pred EEEEEcCCC-CHHHHHHHHHhCC-cEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCccccccc-ce
Q psy17227 58 VFVDLGSGV-GQVVLQVAAATGC-KICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKIT-QA 134 (268)
Q Consensus 58 ~vLDiGCG~-G~~~~~la~~~~~-~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~-d~ 134 (268)
+|.=||+|. |..........|. ..|+++|.++. .... +. ..|.. .. ...|.. +... ++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~--~~~~----~~----~~g~~---~~-~~~~~~-----~~~~~~a 63 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE--SISK----AV----DLGII---DE-GTTSIA-----KVEDFSP 63 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH--HHHH----HH----HTTSC---SE-EESCGG-----GGGGTCC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHH----HH----HCCCc---cc-ccCCHH-----HHhcCCC
Confidence 577788765 2222222233454 14999999864 2211 11 12221 01 112221 1223 56
Q ss_pred EEEEEeccccCcCHHHHHHHHHhcCCCCcEEEE
Q psy17227 135 SIVFVNNFAFGPTVDHALKERFQDLKDGARIVS 167 (268)
Q Consensus 135 dvv~~~~~~~~~~~~~~l~e~~r~LkpGG~~i~ 167 (268)
|+|++... .......+.++...++||..++.
T Consensus 64 DvVilavp--~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 64 DFVMLSSP--VRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp SEEEECSC--HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEE
Confidence 77776422 12244556677778899887764
No 498
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=60.58 E-value=6 Score=34.60 Aligned_cols=88 Identities=16% Similarity=0.188 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCC-CHHHHHHHHHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccccc
Q psy17227 55 PDDVFVDLGSGV-GQVVLQVAAATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKITQ 133 (268)
Q Consensus 55 ~~~~vLDiGCG~-G~~~~~la~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~~d 133 (268)
.|++|.=||+|. |......++.+|.. |+|.|.++... .. . . .+++ .+ + .+-..+
T Consensus 140 ~g~tvgIiG~G~IG~~vA~~l~~~G~~-V~~~d~~~~~~--~~-----~-----~-----g~~~--~~---l--~ell~~ 194 (334)
T 2pi1_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMK-VLCYDVVKRED--LK-----E-----K-----GCVY--TS---L--DELLKE 194 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCCHH--HH-----H-----T-----TCEE--CC---H--HHHHHH
T ss_pred cCceEEEECcCHHHHHHHHHHHHCcCE-EEEECCCcchh--hH-----h-----c-----Ccee--cC---H--HHHHhh
Confidence 467899998863 33333344557876 99999998511 10 0 1 1222 22 1 122235
Q ss_pred eEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 134 ASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 134 ~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
+|+|++.... .++....+ .+.+..||||..||=+
T Consensus 195 aDvV~l~~P~-t~~t~~li~~~~l~~mk~gailIN~ 229 (334)
T 2pi1_A 195 SDVISLHVPY-TKETHHMINEERISLMKDGVYLINT 229 (334)
T ss_dssp CSEEEECCCC-CTTTTTCBCHHHHHHSCTTEEEEEC
T ss_pred CCEEEEeCCC-ChHHHHhhCHHHHhhCCCCcEEEEC
Confidence 6788765332 12222222 5667889999988853
No 499
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=60.37 E-value=9.7 Score=34.11 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCCCHHHHHHH---HHhCCcEEEEEeCCCChhHHHHHHHHHHHHHHHhccccccEEEEEcCCCCCcccccc
Q psy17227 55 PDDVFVDLGSGVGQVVLQVA---AATGCKICWGVEKADLPAKYAEMHTVFKRWMQWYGKRHGEFRLVKGDFLTEEHREKI 131 (268)
Q Consensus 55 ~~~~vLDiGCG~G~~~~~la---~~~~~~~v~GiD~s~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~gD~~~l~~~~~~ 131 (268)
.|++|.=||+| .++..+| +.+|.. |++.|.++.....+. ..| +.. ..++ . +-.
T Consensus 190 ~gktvGIIGlG--~IG~~vA~~l~a~G~~-V~~~d~~~~~~~~~~----------~~G-----~~~-~~~l---~--ell 245 (393)
T 2nac_A 190 EAMHVGTVAAG--RIGLAVLRRLAPFDVH-LHYTDRHRLPESVEK----------ELN-----LTW-HATR---E--DMY 245 (393)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGTCE-EEEECSSCCCHHHHH----------HHT-----CEE-CSSH---H--HHG
T ss_pred CCCEEEEEeEC--HHHHHHHHHHHhCCCE-EEEEcCCccchhhHh----------hcC-----cee-cCCH---H--HHH
Confidence 57889889886 4444444 446766 999999864221111 112 221 1122 1 222
Q ss_pred cceEEEEEeccccCcCHHHHH-HHHHhcCCCCcEEEEe
Q psy17227 132 TQASIVFVNNFAFGPTVDHAL-KERFQDLKDGARIVSS 168 (268)
Q Consensus 132 ~d~dvv~~~~~~~~~~~~~~l-~e~~r~LkpGG~~i~~ 168 (268)
..+|+|++.... .++....+ .+.+..||||..||-+
T Consensus 246 ~~aDvV~l~~Pl-t~~t~~li~~~~l~~mk~gailIN~ 282 (393)
T 2nac_A 246 PVCDVVTLNCPL-HPETEHMINDETLKLFKRGAYIVNT 282 (393)
T ss_dssp GGCSEEEECSCC-CTTTTTCBSHHHHTTSCTTEEEEEC
T ss_pred hcCCEEEEecCC-chHHHHHhhHHHHhhCCCCCEEEEC
Confidence 356788875332 22333334 5677889999888854
No 500
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=60.23 E-value=5.6 Score=34.16 Aligned_cols=47 Identities=21% Similarity=0.166 Sum_probs=28.5
Q ss_pred EcCCCCCcccccccceEEEEEecc----ccC----cCHHHH----HHHHHhcCCCCcEEEEe
Q psy17227 119 KGDFLTEEHREKITQASIVFVNNF----AFG----PTVDHA----LKERFQDLKDGARIVSS 168 (268)
Q Consensus 119 ~gD~~~l~~~~~~~d~dvv~~~~~----~~~----~~~~~~----l~e~~r~LkpGG~~i~~ 168 (268)
.+|+...+ ....+|+|++++. .|. .|.... +.-..++|||||.|++-
T Consensus 195 ~lDfg~p~---~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 195 RLDLGIPG---DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp CGGGCSCT---TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred ccccCCcc---ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 55655432 1235899999854 122 333232 34445899999999984
Done!