Query psy17228
Match_columns 99
No_of_seqs 121 out of 1048
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 16:36:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17228.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17228hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3exa_A TRNA delta(2)-isopenten 99.8 2.5E-21 8.6E-26 151.5 6.2 76 16-98 76-162 (322)
2 3foz_A TRNA delta(2)-isopenten 99.8 3.2E-21 1.1E-25 150.5 5.6 75 16-98 83-168 (316)
3 3eph_A TRNA isopentenyltransfe 99.8 8E-20 2.8E-24 146.6 3.3 76 15-98 74-160 (409)
4 3crm_A TRNA delta(2)-isopenten 99.7 1.7E-17 5.7E-22 129.4 4.9 78 15-99 77-164 (323)
5 3d3q_A TRNA delta(2)-isopenten 99.5 4.8E-14 1.7E-18 110.5 5.4 77 15-98 79-169 (340)
6 3a8t_A Adenylate isopentenyltr 98.7 1E-08 3.5E-13 80.4 4.9 38 15-52 113-150 (339)
7 2ze6_A Isopentenyl transferase 96.2 0.0043 1.5E-07 45.2 3.8 36 15-51 74-109 (253)
8 3niq_A 3-guanidinopropionase; 72.4 4.2 0.00014 30.9 4.2 35 18-52 102-136 (326)
9 3pzl_A Agmatine ureohydrolase; 71.9 4.8 0.00017 30.5 4.4 37 17-53 99-135 (313)
10 3lhl_A Putative agmatinase; pr 71.4 4.5 0.00015 30.1 4.1 35 17-51 73-107 (287)
11 1woh_A Agmatinase; alpha/beta 70.3 4 0.00014 30.5 3.6 37 17-53 96-132 (305)
12 2a0m_A Arginase superfamily pr 70.2 4.9 0.00017 30.3 4.1 34 18-51 98-131 (316)
13 2cev_A Protein (arginase); enz 69.6 5.2 0.00018 29.6 4.1 35 18-52 75-109 (299)
14 4dz4_A Agmatinase; hydrolase; 69.5 5 0.00017 30.5 4.0 35 17-51 114-148 (324)
15 3nio_A Guanidinobutyrase; PA14 69.1 5.4 0.00018 30.1 4.1 27 18-44 105-131 (319)
16 2we5_A Carbamate kinase 1; arg 68.7 2 6.7E-05 32.2 1.6 21 22-42 172-192 (310)
17 1y80_A Predicted cobalamin bin 67.9 4 0.00014 28.4 3.0 26 18-43 153-181 (210)
18 4g3h_A Arginase (ROCF); rossma 67.7 5 0.00017 30.6 3.7 34 19-52 68-101 (330)
19 1pq3_A Arginase II, mitochondr 67.6 6 0.00021 29.4 4.1 35 18-52 73-107 (306)
20 2yxb_A Coenzyme B12-dependent 66.6 5.5 0.00019 27.1 3.4 26 17-42 82-109 (161)
21 1gq6_A Proclavaminate amidino 65.6 5.9 0.0002 29.6 3.7 35 17-51 96-130 (313)
22 2aeb_A Arginase 1; hydrolase, 64.8 7.3 0.00025 29.2 4.1 34 18-51 77-110 (322)
23 3ezx_A MMCP 1, monomethylamine 63.8 3.9 0.00013 29.2 2.3 26 18-43 159-187 (215)
24 3kzf_A Carbamate kinase; argin 63.1 2.7 9.2E-05 32.5 1.4 21 23-43 179-199 (317)
25 3m1r_A Formimidoylglutamase; s 61.7 8.1 0.00028 29.1 3.9 35 17-51 103-139 (322)
26 1e19_A Carbamate kinase-like c 61.4 3.1 0.0001 31.3 1.4 22 22-43 176-197 (314)
27 3sl1_A Arginase; metallohydrol 60.0 9.2 0.00031 30.5 4.0 33 19-51 172-204 (413)
28 3ruf_A WBGU; rossmann fold, UD 58.4 8 0.00027 27.9 3.2 32 20-51 13-44 (351)
29 2e9y_A Carbamate kinase; trans 57.7 4.3 0.00015 30.5 1.7 21 21-41 175-195 (316)
30 3kts_A Glycerol uptake operon 50.3 6.6 0.00022 28.2 1.6 18 23-40 140-157 (192)
31 3fuc_A Purine nucleoside phosp 50.1 8.4 0.00029 28.9 2.2 9 36-44 28-36 (284)
32 1ccw_A Protein (glutamate muta 50.0 10 0.00036 24.8 2.4 24 19-42 69-94 (137)
33 2i2x_B MTAC, methyltransferase 49.9 10 0.00036 27.4 2.6 25 19-43 189-214 (258)
34 2ef5_A Arginase; TTHA1496, str 49.1 9 0.00031 28.2 2.2 32 20-52 75-106 (290)
35 1cz3_A Dihydrofolate reductase 48.6 19 0.00064 24.0 3.6 33 20-52 81-114 (168)
36 1y5e_A Molybdenum cofactor bio 48.0 15 0.00052 24.9 3.1 24 20-43 59-84 (169)
37 3kbq_A Protein TA0487; structu 47.8 14 0.00046 25.8 2.8 24 20-43 51-74 (172)
38 3odg_A Xanthosine phosphorylas 47.4 12 0.0004 28.2 2.6 26 19-44 19-45 (287)
39 1oai_A Nuclear RNA export fact 47.0 8.3 0.00028 22.5 1.4 30 6-35 23-53 (59)
40 1vmk_A Purine nucleoside phosp 46.6 11 0.00037 28.2 2.3 29 16-44 12-43 (277)
41 3ix9_A Dihydrofolate reductase 46.4 15 0.00051 25.9 2.9 30 19-48 101-130 (190)
42 3la8_A SMU.1229, putative puri 46.4 12 0.00039 28.7 2.5 26 19-44 42-67 (303)
43 2is8_A Molybdopterin biosynthe 46.0 18 0.0006 24.4 3.2 24 20-43 49-74 (164)
44 2pbq_A Molybdenum cofactor bio 45.9 17 0.0006 24.9 3.2 24 20-43 55-80 (178)
45 2gd9_A Hypothetical protein YY 45.7 31 0.0011 23.2 4.4 34 19-52 105-139 (189)
46 3ek6_A Uridylate kinase; UMPK 44.3 14 0.00046 26.7 2.5 20 23-42 120-139 (243)
47 3khs_A Purine nucleoside phosp 44.1 7.8 0.00027 29.1 1.2 9 36-44 25-33 (285)
48 1mkz_A Molybdenum cofactor bio 43.8 20 0.00069 24.4 3.2 24 20-43 56-81 (172)
49 1xfk_A Formimidoylglutamase; f 43.7 24 0.00084 26.5 3.9 33 18-51 104-136 (336)
50 1qe5_A Pentosyltransferase; en 43.1 15 0.00053 27.1 2.7 10 35-44 32-41 (266)
51 1jlj_A Gephyrin; globular alph 43.0 20 0.00069 25.0 3.2 24 20-43 65-90 (189)
52 2jjx_A Uridylate kinase, UMP k 43.0 15 0.0005 26.5 2.5 16 27-42 128-143 (255)
53 2p4h_X Vestitone reductase; NA 42.9 8.3 0.00028 27.3 1.1 19 32-50 1-19 (322)
54 4a7w_A Uridylate kinase; trans 42.4 15 0.00052 26.3 2.5 18 25-42 121-138 (240)
55 1g2o_A Purine nucleoside phosp 42.4 17 0.00057 26.9 2.8 10 35-44 30-39 (268)
56 1tcv_A Purine-nucleoside phosp 42.0 14 0.00047 27.7 2.3 10 35-44 29-38 (287)
57 2g2c_A Putative molybdenum cof 41.4 23 0.00078 23.9 3.2 24 20-43 57-81 (167)
58 1zdr_A Dihydrofolate reductase 41.3 21 0.00071 24.0 2.9 29 20-48 78-106 (164)
59 2pjk_A 178AA long hypothetical 39.8 24 0.00084 24.3 3.2 24 20-43 68-93 (178)
60 3bul_A Methionine synthase; tr 39.8 21 0.00073 29.5 3.2 26 18-43 163-189 (579)
61 3j15_A Protein pelota; ribosom 38.7 31 0.0011 26.4 3.9 37 14-50 180-216 (357)
62 3phb_E Purine nucleoside phosp 38.4 11 0.00036 29.1 1.2 30 15-44 39-71 (324)
63 3agk_A Peptide chain release f 38.3 28 0.00096 26.5 3.5 34 16-49 197-235 (373)
64 2xw7_A Dihydrofolate reductase 38.1 26 0.00089 23.4 3.0 33 20-52 95-129 (178)
65 4h6b_A Allene oxide cyclase; B 38.1 7.5 0.00026 28.2 0.3 12 35-46 121-132 (195)
66 3pzy_A MOG; ssgcid, seattle st 37.6 26 0.00089 23.8 3.0 22 22-43 56-78 (164)
67 2zqe_A MUTS2 protein; alpha/be 36.8 12 0.00042 22.9 1.1 42 9-51 5-53 (83)
68 2fea_A 2-hydroxy-3-keto-5-meth 36.6 36 0.0012 23.0 3.6 33 20-52 81-114 (236)
69 4b8w_A GDP-L-fucose synthase; 36.3 13 0.00044 25.8 1.2 22 31-52 5-26 (319)
70 3dfr_A Dihydrofolate reductase 36.3 19 0.00064 24.5 2.1 30 19-48 77-107 (162)
71 1xrs_B D-lysine 5,6-aminomutas 35.7 37 0.0013 25.2 3.8 27 17-43 196-225 (262)
72 1di6_A MOGA, molybdenum cofact 35.4 31 0.0011 24.2 3.2 24 20-43 53-78 (195)
73 4b4o_A Epimerase family protei 35.1 11 0.00039 26.5 0.8 16 35-50 3-18 (298)
74 1y1p_A ARII, aldehyde reductas 34.9 13 0.00046 26.2 1.2 22 31-52 10-31 (342)
75 3e8x_A Putative NAD-dependent 34.8 13 0.00046 25.2 1.1 22 31-52 20-41 (236)
76 3ozb_A Methylthioadenosine pho 34.5 8 0.00027 28.6 -0.1 9 36-44 19-27 (259)
77 4id9_A Short-chain dehydrogena 34.5 13 0.00045 26.7 1.1 21 31-51 18-38 (347)
78 2z1m_A GDP-D-mannose dehydrata 34.4 14 0.00046 26.3 1.1 19 32-50 3-21 (345)
79 2vgn_A DOM34; translation term 34.2 29 0.001 26.9 3.1 36 14-50 189-225 (386)
80 2p4s_A Purine nucleoside phosp 34.0 20 0.00068 28.1 2.1 25 21-45 95-122 (373)
81 2rh8_A Anthocyanidin reductase 33.8 14 0.00048 26.4 1.1 19 32-50 9-27 (338)
82 1uuy_A CNX1, molybdopterin bio 33.7 36 0.0012 22.9 3.2 24 20-43 58-83 (167)
83 2brj_A Arabidopsis thaliana ge 33.4 7 0.00024 28.2 -0.5 13 34-46 112-124 (188)
84 3obw_A Protein pelota homolog; 33.2 46 0.0016 25.7 4.1 37 14-50 187-223 (364)
85 3vps_A TUNA, NAD-dependent epi 32.3 15 0.00053 25.7 1.1 20 32-51 7-26 (321)
86 1i24_A Sulfolipid biosynthesis 32.2 14 0.00049 27.0 1.0 21 31-51 10-30 (404)
87 3mca_B Protein DOM34, elongati 32.1 29 0.001 27.0 2.8 37 14-50 183-219 (390)
88 3agj_B Protein pelota homolog; 31.7 47 0.0016 25.4 3.8 37 14-50 174-210 (358)
89 3rfq_A Pterin-4-alpha-carbinol 31.6 38 0.0013 23.7 3.1 23 21-43 78-101 (185)
90 3fvv_A Uncharacterized protein 31.5 64 0.0022 21.2 4.2 34 19-52 95-129 (232)
91 2p0y_A Hypothetical protein LP 30.4 15 0.00051 28.5 0.8 20 32-53 11-30 (341)
92 2ydy_A Methionine adenosyltran 30.2 18 0.0006 25.6 1.1 20 32-51 2-21 (315)
93 2pr7_A Haloacid dehalogenase/e 29.9 47 0.0016 19.8 3.0 36 17-52 19-55 (137)
94 2o2z_A Hypothetical protein; s 29.8 17 0.0006 27.9 1.1 19 33-53 6-24 (323)
95 2q7x_A UPF0052 protein SP_1565 29.5 15 0.00052 28.2 0.7 20 32-53 5-24 (326)
96 1viz_A PCRB protein homolog; s 29.4 38 0.0013 24.7 2.8 30 22-51 170-203 (240)
97 1rpn_A GDP-mannose 4,6-dehydra 28.6 18 0.00062 25.7 1.0 20 31-50 13-32 (335)
98 2p11_A Hypothetical protein; p 28.5 52 0.0018 21.9 3.3 33 19-51 99-131 (231)
99 1vdr_A DHFR, dihydrofolate red 28.4 46 0.0016 22.0 3.0 29 20-48 81-110 (162)
100 2c29_D Dihydroflavonol 4-reduc 28.4 13 0.00046 26.5 0.2 21 31-51 4-24 (337)
101 2pzm_A Putative nucleotide sug 28.3 20 0.0007 25.7 1.2 21 31-51 19-39 (330)
102 1rkx_A CDP-glucose-4,6-dehydra 28.2 20 0.00069 25.8 1.2 20 31-50 8-27 (357)
103 3jtw_A Dihydrofolate reductase 28.1 54 0.0018 22.0 3.3 33 20-52 97-130 (178)
104 2va1_A Uridylate kinase; UMPK, 28.0 33 0.0011 24.6 2.3 17 26-42 137-153 (256)
105 2bka_A CC3, TAT-interacting pr 28.0 21 0.00073 24.1 1.2 20 31-50 17-36 (242)
106 2jgq_A Triosephosphate isomera 27.9 53 0.0018 24.0 3.4 23 19-42 175-197 (233)
107 2ako_A Glutamate 5-kinase; str 27.7 45 0.0015 23.5 3.0 21 20-40 109-129 (251)
108 2f6u_A GGGPS, (S)-3-O-geranylg 27.5 37 0.0013 24.7 2.5 30 22-51 178-211 (234)
109 3oby_A Protein pelota homolog; 27.4 73 0.0025 24.4 4.3 33 14-50 170-202 (352)
110 3tha_A Tryptophan synthase alp 27.1 59 0.002 23.9 3.6 22 19-40 185-206 (252)
111 1xq6_A Unknown protein; struct 27.0 23 0.00079 23.7 1.2 21 31-51 3-23 (253)
112 3slg_A PBGP3 protein; structur 27.0 22 0.00077 25.7 1.2 19 32-50 24-42 (372)
113 3i3v_A Probable secreted solut 26.9 47 0.0016 24.1 3.0 32 14-45 143-174 (405)
114 2d4u_A Methyl-accepting chemot 26.9 8.1 0.00028 24.9 -1.1 11 35-45 2-12 (176)
115 4fe3_A Cytosolic 5'-nucleotida 26.7 70 0.0024 22.7 3.9 34 20-53 145-179 (297)
116 3nav_A Tryptophan synthase alp 26.5 55 0.0019 24.2 3.3 21 20-40 195-215 (271)
117 1vl0_A DTDP-4-dehydrorhamnose 26.4 18 0.00062 25.2 0.6 21 32-52 12-32 (292)
118 3uxy_A Short-chain dehydrogena 26.4 14 0.00048 26.2 0.0 41 4-50 6-46 (266)
119 2ppv_A Uncharacterized protein 26.3 19 0.00064 27.9 0.7 19 33-53 6-24 (332)
120 2x6t_A ADP-L-glycero-D-manno-h 26.1 22 0.00075 25.7 1.1 21 31-51 45-65 (357)
121 1ek6_A UDP-galactose 4-epimera 26.1 22 0.00076 25.3 1.1 19 32-50 2-20 (348)
122 2v6g_A Progesterone 5-beta-red 26.0 19 0.00063 25.9 0.6 20 33-52 2-21 (364)
123 2a35_A Hypothetical protein PA 25.6 24 0.00083 23.2 1.1 20 31-50 4-23 (215)
124 3k6j_A Protein F01G10.3, confi 25.5 78 0.0027 25.2 4.3 21 31-51 222-243 (460)
125 3nzb_X Dihydrofolate reductase 25.0 40 0.0014 23.7 2.2 33 19-51 96-136 (206)
126 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.9 23 0.0008 24.9 1.0 20 31-50 11-30 (321)
127 2ij9_A Uridylate kinase; struc 24.9 40 0.0014 23.2 2.2 19 23-41 93-111 (219)
128 2p10_A MLL9387 protein; putati 24.9 79 0.0027 24.0 4.0 35 17-51 12-47 (286)
129 3nzo_A UDP-N-acetylglucosamine 24.8 42 0.0015 25.2 2.5 23 31-53 34-56 (399)
130 3lyu_A Putative hydrogenase; t 24.7 23 0.0008 23.0 0.9 20 32-51 19-39 (142)
131 3oig_A Enoyl-[acyl-carrier-pro 24.7 23 0.00078 24.6 0.9 13 31-43 6-18 (266)
132 3trf_A Shikimate kinase, SK; a 24.7 68 0.0023 20.6 3.2 29 15-43 58-86 (185)
133 2qi2_A Pelota, cell division p 24.6 39 0.0013 25.9 2.2 32 14-50 175-206 (347)
134 3a1f_A Cytochrome B-245 heavy 24.5 24 0.00081 22.9 0.9 13 31-43 17-29 (186)
135 1kmv_A DHFR, dihydrofolate red 24.4 27 0.00091 24.0 1.2 34 19-52 91-129 (186)
136 2ogx_B Molybdenum storage prot 24.4 29 0.00099 25.2 1.4 20 24-43 133-152 (270)
137 3enk_A UDP-glucose 4-epimerase 24.4 26 0.0009 24.9 1.2 21 31-51 4-24 (341)
138 2hrz_A AGR_C_4963P, nucleoside 24.1 22 0.00075 25.4 0.7 17 32-48 14-30 (342)
139 2btm_A TIM, protein (triosepho 24.0 78 0.0027 23.4 3.8 25 18-42 182-213 (252)
140 1yya_A Triosephosphate isomera 23.9 85 0.0029 23.1 3.9 25 18-42 182-213 (250)
141 1db3_A GDP-mannose 4,6-dehydra 23.9 26 0.0009 25.2 1.1 18 33-50 2-19 (372)
142 3vzx_A Heptaprenylglyceryl pho 23.8 48 0.0016 24.1 2.5 30 22-51 168-201 (228)
143 3c1m_A Probable aspartokinase; 23.6 42 0.0014 26.5 2.3 22 22-43 175-196 (473)
144 3m2p_A UDP-N-acetylglucosamine 23.5 27 0.00094 24.6 1.1 19 33-51 3-21 (311)
145 3acd_A Hypoxanthine-guanine ph 23.5 1.1E+02 0.0038 20.9 4.3 35 19-55 25-62 (181)
146 3dhn_A NAD-dependent epimerase 23.5 31 0.0011 22.9 1.4 18 33-50 5-22 (227)
147 3ehe_A UDP-glucose 4-epimerase 23.4 27 0.00092 24.6 1.1 19 34-52 3-21 (313)
148 3vnd_A TSA, tryptophan synthas 23.3 45 0.0015 24.6 2.3 21 20-40 193-213 (267)
149 3c3d_A 2-phospho-L-lactate tra 23.2 38 0.0013 25.8 2.0 18 34-53 1-18 (311)
150 3w01_A Heptaprenylglyceryl pho 23.1 56 0.0019 23.9 2.8 29 22-50 174-206 (235)
151 2w3w_A Dihydrofolate reductase 23.1 49 0.0017 22.3 2.3 28 20-48 85-112 (167)
152 1x60_A Sporulation-specific N- 23.0 43 0.0015 19.4 1.8 26 19-44 21-46 (79)
153 3cnh_A Hydrolase family protei 22.8 96 0.0033 19.7 3.7 33 19-51 89-121 (200)
154 3jug_A Beta-mannanase; TIM-bar 22.7 79 0.0027 23.9 3.6 24 19-42 159-183 (345)
155 4gni_A Putative heat shock pro 22.6 1.1E+02 0.0037 22.8 4.3 20 33-52 346-367 (409)
156 1ujp_A Tryptophan synthase alp 22.6 56 0.0019 23.9 2.7 19 22-40 191-209 (271)
157 2v5b_A Triosephosphate isomera 22.5 30 0.001 25.5 1.2 12 32-43 198-209 (244)
158 2bl9_A Dihydrofolate reductase 22.5 1E+02 0.0036 22.3 4.1 33 20-52 154-187 (238)
159 2a1f_A Uridylate kinase; PYRH, 22.2 54 0.0018 23.2 2.5 17 26-42 122-138 (247)
160 3tq8_A Dihydrofolate reductase 22.1 52 0.0018 22.9 2.3 28 20-48 79-106 (178)
161 1ucr_A Protein DSVD; dissimila 22.0 40 0.0014 21.1 1.5 26 19-44 37-63 (78)
162 1edo_A Beta-keto acyl carrier 22.0 23 0.00078 24.0 0.4 21 32-52 1-21 (244)
163 2gas_A Isoflavone reductase; N 21.7 31 0.0011 24.0 1.1 18 32-49 2-19 (307)
164 2o23_A HADH2 protein; HSD17B10 21.6 33 0.0011 23.5 1.2 21 31-51 11-31 (265)
165 1h1n_A Endo type cellulase ENG 21.6 95 0.0033 22.2 3.8 26 18-43 143-170 (305)
166 1rd5_A Tryptophan synthase alp 21.6 63 0.0022 22.9 2.8 21 20-40 188-208 (262)
167 2gza_A Type IV secretion syste 21.5 52 0.0018 24.7 2.4 28 23-50 166-197 (361)
168 3s6d_A Putative triosephosphat 21.3 73 0.0025 24.4 3.2 12 31-42 258-269 (310)
169 3os6_A Isochorismate synthase 21.3 51 0.0018 25.9 2.4 28 17-44 50-78 (399)
170 3kp1_A D-ornithine aminomutase 21.1 86 0.0029 27.0 3.8 27 17-43 673-702 (763)
171 3ia4_A Dihydrofolate reductase 21.0 60 0.0021 22.0 2.4 28 20-48 79-106 (162)
172 2dpo_A L-gulonate 3-dehydrogen 21.0 64 0.0022 24.0 2.8 32 20-51 167-201 (319)
173 3ai3_A NADPH-sorbose reductase 20.7 35 0.0012 23.6 1.2 22 31-52 6-27 (263)
174 3mel_A Thiamin pyrophosphokina 20.7 62 0.0021 23.1 2.5 35 19-53 78-114 (222)
175 2q5c_A NTRC family transcripti 20.5 86 0.0029 21.6 3.2 30 18-48 38-68 (196)
176 1req_A Methylmalonyl-COA mutas 20.5 79 0.0027 26.9 3.5 23 18-40 661-685 (727)
177 4dqv_A Probable peptide synthe 20.3 35 0.0012 26.3 1.2 22 31-52 72-93 (478)
178 2xzm_8 RPS25E,; ribosome, tran 20.0 33 0.0011 23.7 0.9 28 19-46 78-105 (143)
179 2ogx_A Molybdenum storage prot 20.0 39 0.0013 24.6 1.4 20 20-39 132-151 (276)
No 1
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=99.83 E-value=2.5e-21 Score=151.52 Aligned_cols=76 Identities=21% Similarity=0.277 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcccCCCCCCCc-----------ccchHhHHHHHhhcchhhchhhh
Q psy17228 16 WTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTILLDNKTNIN-----------DQGEFTLYDMDKIRNLEHGRDVL 84 (99)
Q Consensus 16 ~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~~~~~~~~~-----------~~~~~~l~~~l~~~d~e~~~~~p 84 (99)
-|+++|.+.|++|.++|++|||||||||||+||++|++++.++.++ ..|...||++|+.+| |
T Consensus 76 ~F~~~a~~~i~~i~~~gk~pIlVGGTglYi~aLl~g~~~~~~~~~~~~R~~l~~~~~~~g~~~L~~~L~~~D-------P 148 (322)
T 3exa_A 76 DFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALHDKLSKID-------P 148 (322)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEESCCHHHHHHHHHTCCCCCCBCCHHHHHHHHHHHHHSCHHHHHHHHHTTC-------H
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEcCcHHHHHHHHcCCcCCCCCCCHHHHHHHHHHHHhcCHHHHHHHHHhhC-------H
Confidence 5789999999999999999999999999999999998754221222 136778999999999 9
Q ss_pred HHhhccCCCCCCCC
Q psy17228 85 ESLWKLDMNYSYRI 98 (99)
Q Consensus 85 ~~A~rI~pnD~~RI 98 (99)
++|++|||||++||
T Consensus 149 ~~A~~i~pnd~~Ri 162 (322)
T 3exa_A 149 KAAAAIHPNNYRRV 162 (322)
T ss_dssp HHHTTSCTTCHHHH
T ss_pred HHHhhcCcccHHHH
Confidence 99999999999997
No 2
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=99.83 E-value=3.2e-21 Score=150.54 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcccCCCCCCCcc-----------cchHhHHHHHhhcchhhchhhh
Q psy17228 16 WTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTILLDNKTNIND-----------QGEFTLYDMDKIRNLEHGRDVL 84 (99)
Q Consensus 16 ~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~~~~~~~~~~-----------~~~~~l~~~l~~~d~e~~~~~p 84 (99)
-|+++|.+.|++|+++|++|||||||||||+||++|++ +.|+.++. .|...+|++|..+| |
T Consensus 83 ~f~~~a~~~i~~i~~~g~~pilVGGTglYi~all~gl~-~~p~~~~~~R~~l~~~~~~~g~~~l~~~L~~~D-------P 154 (316)
T 3foz_A 83 DFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLS-PLPSADPEVRARIEQQAAEQGWESLHRQLQEVD-------P 154 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHSCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-------H
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEcCcHHHHHHHHcCcC-CCCCCCHHHHHHHHHHHHhcCHHHHHHHHHHhC-------H
Confidence 47789999999999999999999999999999999985 23333332 35667899999999 9
Q ss_pred HHhhccCCCCCCCC
Q psy17228 85 ESLWKLDMNYSYRI 98 (99)
Q Consensus 85 ~~A~rI~pnD~~RI 98 (99)
++|++|||||++||
T Consensus 155 ~~A~ri~pnd~~Ri 168 (316)
T 3foz_A 155 VAAARIHPNDPQRL 168 (316)
T ss_dssp HHHHHSCTTCHHHH
T ss_pred HHHhhCCCccHHHH
Confidence 99999999999997
No 3
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=99.77 E-value=8e-20 Score=146.64 Aligned_cols=76 Identities=26% Similarity=0.369 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcccCCCCC-CCc----------ccchHhHHHHHhhcchhhchhh
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTILLDNKT-NIN----------DQGEFTLYDMDKIRNLEHGRDV 83 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~~~~~~-~~~----------~~~~~~l~~~l~~~d~e~~~~~ 83 (99)
..|.++|..+|++|+++|++|||||||||||+||++|+. +.++ .++ ..|...||++|+.+|
T Consensus 74 ~~F~~~a~~~i~~i~~~g~~pilVGGTglYi~aLl~gl~-~~~~~~~~~~r~~~~~~~~~g~~~L~~~L~~~D------- 145 (409)
T 3eph_A 74 HRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRV-DTKSSERKLTRKQLDILESTDPDVIYNTLVKCD------- 145 (409)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSC-CCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSC-------
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEECChHHHHHHHHcccc-CCCCccCHHHHHHHHHHhccCHHHHHHHHHHhC-------
Confidence 568899999999999999999999999999999999975 2222 111 124667999999999
Q ss_pred hHHhhccCCCCCCCC
Q psy17228 84 LESLWKLDMNYSYRI 98 (99)
Q Consensus 84 p~~A~rI~pnD~~RI 98 (99)
|++|++|||||++||
T Consensus 146 P~~A~rihpnd~~Ri 160 (409)
T 3eph_A 146 PDIATKYHPNDYRRV 160 (409)
T ss_dssp HHHHTTSCTTCHHHH
T ss_pred HHHHHhcCcccHHHH
Confidence 999999999999997
No 4
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=99.68 E-value=1.7e-17 Score=129.35 Aligned_cols=78 Identities=19% Similarity=0.176 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhccc-CCCCCCC---------cccchHhHHHHHhhcchhhchhhh
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTIL-LDNKTNI---------NDQGEFTLYDMDKIRNLEHGRDVL 84 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~-~~~~~~~---------~~~~~~~l~~~l~~~d~e~~~~~p 84 (99)
.-|.+.+.++|+++.++|+.||+|||||+|++||++|+. +|..+.. ...|...+|++|+.+| |
T Consensus 77 ~~F~~~a~~~i~~i~~~g~~~IlvGGt~~y~~all~g~~~~p~~~~~~R~~l~~~~~~~g~~~l~~~L~~~D-------p 149 (323)
T 3crm_A 77 AEFRADALAAMAKATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVD-------P 149 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEECCchhhHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHhC-------H
Confidence 458889999999999999999999999999999999974 3321111 1235567889999999 9
Q ss_pred HHhhccCCCCCCCCC
Q psy17228 85 ESLWKLDMNYSYRIE 99 (99)
Q Consensus 85 ~~A~rI~pnD~~RI~ 99 (99)
++|++|||||++||.
T Consensus 150 ~~a~~i~~nd~~Ri~ 164 (323)
T 3crm_A 150 ESAARIHPNDPQRLM 164 (323)
T ss_dssp ---------------
T ss_pred HHHhhcCCCCHHHHH
Confidence 999999999999983
No 5
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=99.46 E-value=4.8e-14 Score=110.53 Aligned_cols=77 Identities=31% Similarity=0.330 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhccc-CCC-CCCC------------cccchHhHHHHHhhcchhhc
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTIL-LDN-KTNI------------NDQGEFTLYDMDKIRNLEHG 80 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~-~~~-~~~~------------~~~~~~~l~~~l~~~d~e~~ 80 (99)
.-|.+.+...++++.++|+.||||||||+|++++++|++ ++. .+.+ ...|...+++.|..+|
T Consensus 79 ~dF~~~a~~~i~~i~~~g~~~IlvGGt~ly~~~l~~~l~~~~~~~d~~~~~Rlrrrl~r~~~~G~~~l~~~L~~vd---- 154 (340)
T 3d3q_A 79 YEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYLASFD---- 154 (340)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHBCSCCC---CCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEECChhhhHHHHHhcccccCCCCChHHHHHHHHHHHHHHhcCHHHHHHHHHhhC----
Confidence 357788999999999999999999999999999999984 332 1111 1234556788888888
Q ss_pred hhhhHHhhccCCCCCCCC
Q psy17228 81 RDVLESLWKLDMNYSYRI 98 (99)
Q Consensus 81 ~~~p~~A~rI~pnD~~RI 98 (99)
|.+|++|||||++||
T Consensus 155 ---P~~a~~I~p~d~~Ri 169 (340)
T 3d3q_A 155 ---KESAKDIHPNNRKRV 169 (340)
T ss_dssp ---HHHHHHSCTTCHHHH
T ss_pred ---cHHHhhcCccCchhh
Confidence 999999999999997
No 6
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=98.72 E-value=1e-08 Score=80.41 Aligned_cols=38 Identities=32% Similarity=0.511 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
..|.++|.++|++|.++|++||+|||||+|++++++|+
T Consensus 113 ~~F~~~a~~~i~~i~~~g~~pIlvGGtglYi~all~g~ 150 (339)
T 3a8t_A 113 ADFRSLAGKAVSEITGRRKLPVLVGGSNSFIHALLVDR 150 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHBSS
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEcCHHHHHHHHHhCC
Confidence 56889999999999999999999999999999999996
No 7
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=96.15 E-value=0.0043 Score=45.18 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
.-|.+.+...+ ++.++|+.||++||++.|+++++.+
T Consensus 74 ~~f~~~~~~~i-~~~~~g~~vIl~gg~~~~~~~~~~~ 109 (253)
T 2ze6_A 74 ESAHRRLIFEV-DWRKSEEGLILEGGSISLLNCMAKS 109 (253)
T ss_dssp HHHHHHHHHHH-HTTTTSSEEEEEECCHHHHHHHHHC
T ss_pred HHHHHHHHHHH-HHHhCCCCeEEeccHHHHHHHHHhc
Confidence 34667788888 8889999999999999999999876
No 8
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A
Probab=72.40 E-value=4.2 Score=30.93 Aligned_cols=35 Identities=11% Similarity=0.297 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
.+...+.+.++.++|++||+.||-..=--+.+.++
T Consensus 102 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~al 136 (326)
T 3niq_A 102 LRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRAL 136 (326)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcchhhHHHHHHH
Confidence 45667778888999999999999776544555554
No 9
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=71.92 E-value=4.8 Score=30.47 Aligned_cols=37 Identities=16% Similarity=0.412 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhccc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~ 53 (99)
..+...+.+.++.++|++||+.||-..=--+.+.++.
T Consensus 99 ~~~~i~~~v~~~l~~g~~PivlGGdHsit~~~~~a~~ 135 (313)
T 3pzl_A 99 VIDTVESVVSAVMSDGKIPIMLGGEHSITVGAVRALP 135 (313)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHhc
Confidence 3456677788889999999999998876667777754
No 10
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=71.45 E-value=4.5 Score=30.12 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
..+...+.+.++.++|+.||+.||-..=--+.+.|
T Consensus 73 ~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a 107 (287)
T 3lhl_A 73 VLKEIYQETYKIVRDSKVPFMIGGEHLVTLPAFKA 107 (287)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCcchhhHHHHHH
Confidence 34566777888999999999999976644444444
No 11
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=70.26 E-value=4 Score=30.50 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhccc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~~ 53 (99)
..+...+.+.++.++|+.||+.||-..=--+.+.++.
T Consensus 96 ~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a~~ 132 (305)
T 1woh_A 96 AHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFA 132 (305)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEESSGGGHHHHHGGGT
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCCccchHHHHHHHH
Confidence 3456677788899999999999999887777777764
No 12
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=70.22 E-value=4.9 Score=30.28 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
.+...+.+.++.++|+.||+.||-..=--+.+.+
T Consensus 98 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a 131 (316)
T 2a0m_A 98 HEKLESKVFTVLARGAFPFVIGGGNDQSAPNGRA 131 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcchhhHHHHHH
Confidence 4566677788899999999999976544344443
No 13
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=69.57 E-value=5.2 Score=29.62 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
.+...+.+.++.++|+.||+.||-..=--+.+.|+
T Consensus 75 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~~~ 109 (299)
T 2cev_A 75 NEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGV 109 (299)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEecCCcccchhhhHHH
Confidence 34566777888899999999999876544444443
No 14
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis}
Probab=69.51 E-value=5 Score=30.48 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
..+...+.+.+++++|+.||+.||-..=--+.+.+
T Consensus 114 ~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a 148 (324)
T 4dz4_A 114 IKPAIVEHARTILQSDARMLTLGGDHYITYPLLIA 148 (324)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEESSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCcchhhHHHHHH
Confidence 44567788888999999999999977544444444
No 15
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=69.08 E-value=5.4 Score=30.11 Aligned_cols=27 Identities=22% Similarity=0.559 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHH
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYY 44 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglY 44 (99)
.+...+.+.++.++|+.||+.||-..=
T Consensus 105 ~~~i~~~v~~~l~~g~~pi~lGGdHsi 131 (319)
T 3nio_A 105 VRIIEQEYDRILGHGILPLTLGGDHTI 131 (319)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEECCcchh
Confidence 456677788889999999999996653
No 16
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=68.73 E-value=2 Score=32.20 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=18.5
Q ss_pred HHHHHHHHhcCCceEEEcccH
Q psy17228 22 KTKIDDILQRNKVPIIVGGTN 42 (99)
Q Consensus 22 ~~~i~~i~~~~~~pilVGGTg 42 (99)
.+.|+.+++.|.+||+.||+|
T Consensus 172 ~~~i~~lL~~g~IpIi~Gg~G 192 (310)
T 2we5_A 172 AETINTLIKNDIITISCGGGG 192 (310)
T ss_dssp HHHHHHHHHTTCEEECCGGGC
T ss_pred HHHHHHHHHCCCEEEEECCCC
Confidence 677888999999999999866
No 17
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=67.89 E-value=4 Score=28.43 Aligned_cols=26 Identities=31% Similarity=0.575 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhcC---CceEEEcccHH
Q psy17228 18 IKLTKTKIDDILQRN---KVPIIVGGTNY 43 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~---~~pilVGGTgl 43 (99)
...+.+.++.+.++| ++||+|||.++
T Consensus 153 ~~~~~~~i~~l~~~~~~~~~~v~vGG~~~ 181 (210)
T 1y80_A 153 MMNMKSTIDALIAAGLRDRVKVIVGGAPL 181 (210)
T ss_dssp THHHHHHHHHHHHTTCGGGCEEEEESTTC
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECCCC
Confidence 456778888887776 49999999875
No 18
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=67.67 E-value=5 Score=30.57 Aligned_cols=34 Identities=6% Similarity=0.262 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
+...+.+.+++++|++||+.||-..=--+.+.|+
T Consensus 68 ~~l~~~v~~il~~g~~PivLGGdHsia~g~i~a~ 101 (330)
T 4g3h_A 68 ENLIPCMKEVFEKKEFPLILSSEHANMFGIFQAF 101 (330)
T ss_dssp HTHHHHHHHHHTSSSCEEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCcchhhHHHHHHH
Confidence 5667778889999999999999876544544443
No 19
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=67.62 E-value=6 Score=29.37 Aligned_cols=35 Identities=6% Similarity=-0.003 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
.+...+.+.++.++|+.||+.||-..=--+.+.|+
T Consensus 73 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~~~ 107 (306)
T 1pq3_A 73 NQELAEVVSRAVSDGYSCVTLGGDHSLAIGTISGH 107 (306)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCcccchHhHHHHH
Confidence 34566777888899999999999765444444443
No 20
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=66.63 E-value=5.5 Score=27.06 Aligned_cols=26 Identities=23% Similarity=0.548 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHhcC--CceEEEcccH
Q psy17228 17 TIKLTKTKIDDILQRN--KVPIIVGGTN 42 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~--~~pilVGGTg 42 (99)
+...+.+.++.+.+.| +++|+|||..
T Consensus 82 ~~~~~~~~i~~L~~~g~~~i~v~vGG~~ 109 (161)
T 2yxb_A 82 HLHLMKRLMAKLRELGADDIPVVLGGTI 109 (161)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCEEEEECC
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3456777888887776 5999999964
No 21
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=65.55 E-value=5.9 Score=29.62 Aligned_cols=35 Identities=17% Similarity=0.383 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
..+...+.+.++.++|+.||+.||-..=--+.+.+
T Consensus 96 ~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a 130 (313)
T 1gq6_A 96 AIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRA 130 (313)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcchhhHHHHHH
Confidence 34567777888899999999999986544344443
No 22
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=64.81 E-value=7.3 Score=29.23 Aligned_cols=34 Identities=9% Similarity=0.261 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
.+...+.+.++.++|+.||+.||-..=--+.+.|
T Consensus 77 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a 110 (322)
T 2aeb_A 77 SEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISG 110 (322)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEecCccccchHHHHH
Confidence 3566677788889999999999976543333333
No 23
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.85 E-value=3.9 Score=29.16 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhcC---CceEEEcccHH
Q psy17228 18 IKLTKTKIDDILQRN---KVPIIVGGTNY 43 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~---~~pilVGGTgl 43 (99)
.....+.++.+.++| ++||+|||..+
T Consensus 159 ~~~~~~~i~~l~~~~~~~~v~v~vGG~~~ 187 (215)
T 3ezx_A 159 MLGQKDLMDRLNEEKLRDSVKCMFGGAPV 187 (215)
T ss_dssp HTHHHHHHHHHHHTTCGGGSEEEEESSSC
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCCC
Confidence 345677788888776 69999999764
No 24
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=63.11 E-value=2.7 Score=32.49 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=18.7
Q ss_pred HHHHHHHhcCCceEEEcccHH
Q psy17228 23 TKIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 23 ~~i~~i~~~~~~pilVGGTgl 43 (99)
+.|+.+++.|.+||++||.|.
T Consensus 179 ~~I~~LL~~G~IvI~aGGgGi 199 (317)
T 3kzf_A 179 GVIKTLIDNNVLVICTNGGGI 199 (317)
T ss_dssp HHHHHHHHTTCEEECCGGGCE
T ss_pred HHHHHHHHCCCEEEEeCCCCC
Confidence 678889999999999999885
No 25
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=61.68 E-value=8.1 Score=29.15 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhcCC--ceEEEcccHHHHHHHHhc
Q psy17228 17 TIKLTKTKIDDILQRNK--VPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~--~pilVGGTglYi~all~g 51 (99)
..+...+.+.++.++|+ .||+.||-..=--+.+.+
T Consensus 103 ~~~~i~~~v~~~l~~g~~~~pi~lGGdHsit~~~~~a 139 (322)
T 3m1r_A 103 SHHHIFQTMHALLSDHPDWVPLILGGDNSISYSTIKA 139 (322)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEESCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceeEEeCCCccccHHHHHH
Confidence 34566777888999999 999999977554444444
No 26
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=61.41 E-value=3.1 Score=31.32 Aligned_cols=22 Identities=23% Similarity=0.444 Sum_probs=18.1
Q ss_pred HHHHHHHHhcCCceEEEcccHH
Q psy17228 22 KTKIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 22 ~~~i~~i~~~~~~pilVGGTgl 43 (99)
.+.|..+++.|.+||+.||.|.
T Consensus 176 ~~~i~~lL~~g~IpV~~Gg~gi 197 (314)
T 1e19_A 176 AETIKKLVERGVIVIASGGGGV 197 (314)
T ss_dssp HHHHHHHHHTTCEEECSGGGCE
T ss_pred HHHHHHHHHCCCEEEEeCCCcc
Confidence 5678889999999999887664
No 27
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=60.01 E-value=9.2 Score=30.55 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
+...+.+.+++++|++||+.||-..=--+.+.|
T Consensus 172 ~~L~~~V~~il~~G~~PIvLGGDHSIalg~i~a 204 (413)
T 3sl1_A 172 KNLFDTMSNELRKKNFVLNIGGDHGVAFSSILS 204 (413)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCchHhHHHHHHH
Confidence 456677788899999999999976543344443
No 28
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=58.36 E-value=8 Score=27.86 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
...++.....-.++..+|+||||+==.+|+.-
T Consensus 13 ~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~ 44 (351)
T 3ruf_A 13 RYEEITQQLIFSPKTWLITGVAGFIGSNLLEK 44 (351)
T ss_dssp HHHHHHHHHHHSCCEEEEETTTSHHHHHHHHH
T ss_pred HHhhHHhhCCCCCCeEEEECCCcHHHHHHHHH
Confidence 44555555666788899999999855555444
No 29
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.74 E-value=4.3 Score=30.50 Aligned_cols=21 Identities=14% Similarity=0.305 Sum_probs=17.3
Q ss_pred HHHHHHHHHhcCCceEEEccc
Q psy17228 21 TKTKIDDILQRNKVPIIVGGT 41 (99)
Q Consensus 21 a~~~i~~i~~~~~~pilVGGT 41 (99)
..+.|+.+++.|.+||+.||.
T Consensus 175 ~~~~i~~lL~~g~IpI~~g~~ 195 (316)
T 2e9y_A 175 DRDLIAEASAESPAVVALGGG 195 (316)
T ss_dssp THHHHHHHHHHCSEEEECGGG
T ss_pred hHHHHHHHHHCCCEEEEECCC
Confidence 456788899999999998764
No 30
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=50.26 E-value=6.6 Score=28.20 Aligned_cols=18 Identities=28% Similarity=0.763 Sum_probs=15.0
Q ss_pred HHHHHHHhcCCceEEEcc
Q psy17228 23 TKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 23 ~~i~~i~~~~~~pilVGG 40 (99)
+.|+++.++-.+|||+||
T Consensus 140 ~iI~~i~~~~~~PiIaGG 157 (192)
T 3kts_A 140 EQVQKMTQKLHIPVIAGG 157 (192)
T ss_dssp HHHHHHHHHHCCCEEEES
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 567777777789999998
No 31
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=50.14 E-value=8.4 Score=28.93 Aligned_cols=9 Identities=11% Similarity=0.294 Sum_probs=7.9
Q ss_pred EEEcccHHH
Q psy17228 36 IIVGGTNYY 44 (99)
Q Consensus 36 ilVGGTglY 44 (99)
=|+||||||
T Consensus 28 giI~GSGl~ 36 (284)
T 3fuc_A 28 AVICGSGLG 36 (284)
T ss_dssp EEEECTTCG
T ss_pred EEEecCchh
Confidence 478999999
No 32
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=49.97 E-value=10 Score=24.85 Aligned_cols=24 Identities=17% Similarity=0.070 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhcC--CceEEEcccH
Q psy17228 19 KLTKTKIDDILQRN--KVPIIVGGTN 42 (99)
Q Consensus 19 ~~a~~~i~~i~~~~--~~pilVGGTg 42 (99)
..+.+.++.+.++| .++|+|||..
T Consensus 69 ~~~~~~i~~l~~~g~~~i~v~vGG~~ 94 (137)
T 1ccw_A 69 IDCKGLRQKCDEAGLEGILLYVGGNI 94 (137)
T ss_dssp HHHTTHHHHHHHTTCTTCEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 35666777777765 5999999975
No 33
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=49.93 E-value=10 Score=27.44 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhcC-CceEEEcccHH
Q psy17228 19 KLTKTKIDDILQRN-KVPIIVGGTNY 43 (99)
Q Consensus 19 ~~a~~~i~~i~~~~-~~pilVGGTgl 43 (99)
....+.++.+.++| .+||+|||..+
T Consensus 189 ~~~~~~i~~l~~~~~~~~v~vGG~~~ 214 (258)
T 2i2x_B 189 YAFKEVNDMLLENGIKIPFACGGGAV 214 (258)
T ss_dssp THHHHHHHHHHTTTCCCCEEEESTTC
T ss_pred HHHHHHHHHHHhcCCCCcEEEECccC
Confidence 35666777776664 59999999654
No 34
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=49.06 E-value=9 Score=28.18 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~all~g~ 52 (99)
...+.+.+ .++|+.||+.||-..=--+.+.++
T Consensus 75 ~i~~~v~~-l~~g~~pi~lGGdHsit~~~~~a~ 106 (290)
T 2ef5_A 75 VLKERLAA-LPEGVFPIVLGGDHSLSMGSVAGA 106 (290)
T ss_dssp HHHHHHHT-SCTTEEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHH-hhcCceEEEEcCcccchHHHHHHH
Confidence 34455566 678999999999865444444443
No 35
>1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A*
Probab=48.62 E-value=19 Score=24.03 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCC-ceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQRNK-VPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~~~-~pilVGGTglYi~all~g~ 52 (99)
+..++++.+.+++. -.+|.||..+|=..|-.|+
T Consensus 81 ~l~~~l~~l~~~~~~~i~v~GG~~l~~~~l~~~l 114 (168)
T 1cz3_A 81 SPADVVKFLEGKGYERVAVIGGKTVFTEFLREKL 114 (168)
T ss_dssp CHHHHHHHHHHTTCSEEEEEECHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCC
Confidence 45566777766664 4455599999988777664
No 36
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=48.03 E-value=15 Score=24.90 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=17.7
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+++..+ +-.+.|.+||||.
T Consensus 59 ~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 59 SIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp HHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 44556666666 6688999999975
No 37
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=47.78 E-value=14 Score=25.84 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhcCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTgl 43 (99)
.-.+.+++..++..+.|.+||||.
T Consensus 51 ~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 51 EIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp HHHHHHHHHHHHCSEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCEEEEcCCCcC
Confidence 344556666667899999999996
No 38
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=47.40 E-value=12 Score=28.22 Aligned_cols=26 Identities=15% Similarity=-0.033 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhcCCc-eEEEcccHHH
Q psy17228 19 KLTKTKIDDILQRNKV-PIIVGGTNYY 44 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~-pilVGGTglY 44 (99)
++|.+.|.+.....++ .=|+||||||
T Consensus 19 ~~~~~~i~~~~~~~~p~igiI~GSGl~ 45 (287)
T 3odg_A 19 FQAVKYIQKIKPGFKPQIAFILGSGLG 45 (287)
T ss_dssp HHHHHHHHHHSTTCCCSEEEEECTTTG
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCChh
Confidence 3455555554421222 3488999999
No 39
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=46.96 E-value=8.3 Score=22.55 Aligned_cols=30 Identities=17% Similarity=0.580 Sum_probs=25.0
Q ss_pred hhhhh-cccchHHHHHHHHHHHHHHhcCCce
Q psy17228 6 QWRLK-LTKTKWTIKLTKTKIDDILQRNKVP 35 (99)
Q Consensus 6 ~~~~~-~~~~~~~~~~a~~~i~~i~~~~~~p 35 (99)
+|..+ |++.-|....|.....++.++|++|
T Consensus 23 ~~s~~cL~~~~Wd~~~A~~~F~~l~~~~~IP 53 (59)
T 1oai_A 23 EWSQKCLQDNNWDYTRSAQAFTHLKAKGEIP 53 (59)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHcCCCC
Confidence 34433 6788999999999999999999998
No 40
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=46.58 E-value=11 Score=28.24 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHhc-CCc--eEEEcccHHH
Q psy17228 16 WTIKLTKTKIDDILQR-NKV--PIIVGGTNYY 44 (99)
Q Consensus 16 ~~~~~a~~~i~~i~~~-~~~--pilVGGTglY 44 (99)
-.-+++.++.+-|.++ +.. .=|+||||||
T Consensus 12 ~~~~~~~~~~~~i~~~~~~~p~igiI~GSGl~ 43 (277)
T 1vmk_A 12 HMMKKIEEARTFISERTNLSPDILIILGSGFG 43 (277)
T ss_dssp -CHHHHHHHHHHHHTTCCCCCSEEEEEC---C
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEccCchh
Confidence 3446667777777665 222 3467999999
No 41
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=46.38 E-value=15 Score=25.88 Aligned_cols=30 Identities=20% Similarity=0.179 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHHHH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIESL 48 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~al 48 (99)
.+..++++.+.++++-.+|+||..+|=++|
T Consensus 101 ~~~~eal~~lk~~~~~i~ViGG~~ly~~~l 130 (190)
T 3ix9_A 101 HDVQSVLDWYSAQEKNLYIVGGKQIFQAFE 130 (190)
T ss_dssp SSHHHHHHHHHTSCSCEEEEECHHHHHHHG
T ss_pred CCHHHHHHHHHhCCCCEEEECCHHHHHHHH
Confidence 456677777766677788899999997665
No 42
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=46.37 E-value=12 Score=28.70 Aligned_cols=26 Identities=8% Similarity=-0.138 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYY 44 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglY 44 (99)
++|.+.|.+.....-..=|+||||||
T Consensus 42 ~~~~~~i~~~~~~~p~igiI~GSGl~ 67 (303)
T 3la8_A 42 YETRDFLTAKGVQKPEFGLILGSGLG 67 (303)
T ss_dssp HHHHHHHHHHTCCCCSEEEECCTTCG
T ss_pred HHHHHHHHHhcCCCCeEEEEccCcHh
Confidence 34444554443222223477999998
No 43
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=46.02 E-value=18 Score=24.43 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=17.3
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+++..+ +-.+.|.+||||.
T Consensus 49 ~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 49 MIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 34456666666 5688999999985
No 44
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=45.90 E-value=17 Score=24.88 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=17.2
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+++..+ +-.+.|.+||||.
T Consensus 55 ~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 55 LIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34456666666 6788999999975
No 45
>2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=45.67 E-value=31 Score=23.19 Aligned_cols=34 Identities=9% Similarity=0.150 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCceEEE-cccHHHHHHHHhcc
Q psy17228 19 KLTKTKIDDILQRNKVPIIV-GGTNYYIESLLWTI 52 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilV-GGTglYi~all~g~ 52 (99)
.+..++++.+.+++---|+| ||..+|=..|-.|+
T Consensus 105 ~~l~~~l~~L~~~~~~~i~v~GG~~l~~~~l~~gl 139 (189)
T 2gd9_A 105 DNILEEVNKLKKNPGKDIWLYGGASLITTFINLGL 139 (189)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEECHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHhCCCCeEEEEChHHHHHHHHHCCC
Confidence 46777888887776545555 88888877666664
No 46
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=44.28 E-value=14 Score=26.68 Aligned_cols=20 Identities=20% Similarity=0.425 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCceEEEcccH
Q psy17228 23 TKIDDILQRNKVPIIVGGTN 42 (99)
Q Consensus 23 ~~i~~i~~~~~~pilVGGTg 42 (99)
+.+..+++.|.+||+.||+|
T Consensus 120 ~~~~~lL~~g~IpVv~~~~g 139 (243)
T 3ek6_A 120 RRAIRHLEKGRIAIFAAGTG 139 (243)
T ss_dssp HHHHHHHHTTCEEEEESTTS
T ss_pred HHHHHHHHCCcEEEEECCCC
Confidence 34567788999999999876
No 47
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=44.11 E-value=7.8 Score=29.08 Aligned_cols=9 Identities=33% Similarity=0.202 Sum_probs=7.8
Q ss_pred EEEcccHHH
Q psy17228 36 IIVGGTNYY 44 (99)
Q Consensus 36 ilVGGTglY 44 (99)
=|+||||||
T Consensus 25 giI~GSGl~ 33 (285)
T 3khs_A 25 GIVCGSGLG 33 (285)
T ss_dssp EEEECTTCG
T ss_pred EEEecCchh
Confidence 467999999
No 48
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=43.82 E-value=20 Score=24.40 Aligned_cols=24 Identities=21% Similarity=0.427 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhc--CCceEEEcccHH
Q psy17228 20 LTKTKIDDILQR--NKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~~--~~~pilVGGTgl 43 (99)
.-.+.+++..++ -.+.|.+||||.
T Consensus 56 ~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 56 AIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 344566666665 688899999986
No 49
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1
Probab=43.74 E-value=24 Score=26.54 Aligned_cols=33 Identities=15% Similarity=0.136 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 18 IKLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
.+...+.+.++.++ +.||+.||-..=--+.+.|
T Consensus 104 ~~~i~~~v~~~l~~-~~pi~LGGdHsit~g~~~a 136 (336)
T 1xfk_A 104 QQECAQVIQQALPH-ARAIVLGGGHEIAWATFQG 136 (336)
T ss_dssp HHHHHHHHHHHTTT-CCEEEECSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCeEEEeCchhhhHHHHHH
Confidence 35566777888889 9999999976544333333
No 50
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=43.15 E-value=15 Score=27.09 Aligned_cols=10 Identities=20% Similarity=0.242 Sum_probs=8.1
Q ss_pred eEEEcccHHH
Q psy17228 35 PIIVGGTNYY 44 (99)
Q Consensus 35 pilVGGTglY 44 (99)
-=|+||||||
T Consensus 32 igiI~GSGl~ 41 (266)
T 1qe5_A 32 MALVLGSGWG 41 (266)
T ss_dssp EEEECCTTCT
T ss_pred EEEEeCCchh
Confidence 4567999998
No 51
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=43.05 E-value=20 Score=24.97 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=17.1
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+++..+ +-.+.|.+||||.
T Consensus 65 ~I~~al~~a~~~~~~DlVIttGGtg~ 90 (189)
T 1jlj_A 65 EIKETLIDWCDEKELNLILTTGGTGF 90 (189)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 44456666665 5688999999975
No 52
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=43.00 E-value=15 Score=26.46 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=13.4
Q ss_pred HHHhcCCceEEEcccH
Q psy17228 27 DILQRNKVPIIVGGTN 42 (99)
Q Consensus 27 ~i~~~~~~pilVGGTg 42 (99)
.+++.|.+||+.||+|
T Consensus 128 ~lL~~g~IpVi~gg~g 143 (255)
T 2jjx_A 128 HHLDNGYIVIFGGGNG 143 (255)
T ss_dssp HHHHTTCEEEEESTTS
T ss_pred HHHhCCcEEEEeCCCC
Confidence 6778999999998764
No 53
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=42.90 E-value=8.3 Score=27.26 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=13.2
Q ss_pred CCceEEEcccHHHHHHHHh
Q psy17228 32 NKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~ 50 (99)
|+..+|+||||+==.+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~ 19 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIK 19 (322)
T ss_dssp CCEEEEESTTSHHHHHHHH
T ss_pred CCEEEEECChhHHHHHHHH
Confidence 4567899999985444443
No 54
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=42.40 E-value=15 Score=26.33 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=15.0
Q ss_pred HHHHHhcCCceEEEcccH
Q psy17228 25 IDDILQRNKVPIIVGGTN 42 (99)
Q Consensus 25 i~~i~~~~~~pilVGGTg 42 (99)
+..+++.|.+||+.||+|
T Consensus 121 i~~lL~~g~ipVi~~~~g 138 (240)
T 4a7w_A 121 AIRHLEKGRVVIFGAGTG 138 (240)
T ss_dssp HHHHHHTTCEEEEESTTS
T ss_pred HHHHHHCCCEEEEeCCCC
Confidence 456778999999999876
No 55
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=42.36 E-value=17 Score=26.93 Aligned_cols=10 Identities=20% Similarity=0.404 Sum_probs=8.1
Q ss_pred eEEEcccHHH
Q psy17228 35 PIIVGGTNYY 44 (99)
Q Consensus 35 pilVGGTglY 44 (99)
-=|+||||||
T Consensus 30 igiI~GSGl~ 39 (268)
T 1g2o_A 30 VAVVLGSGWL 39 (268)
T ss_dssp EEEEECTTCG
T ss_pred EEEEcCCchh
Confidence 3567999998
No 56
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=42.04 E-value=14 Score=27.68 Aligned_cols=10 Identities=20% Similarity=0.086 Sum_probs=8.2
Q ss_pred eEEEcccHHH
Q psy17228 35 PIIVGGTNYY 44 (99)
Q Consensus 35 pilVGGTglY 44 (99)
--|+||||||
T Consensus 29 igiI~GSGl~ 38 (287)
T 1tcv_A 29 IGIICGSGLG 38 (287)
T ss_dssp EEEECCTTCG
T ss_pred EEEEcCCchh
Confidence 3567999999
No 57
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=41.45 E-value=23 Score=23.93 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhc-CCceEEEcccHH
Q psy17228 20 LTKTKIDDILQR-NKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~~-~~~pilVGGTgl 43 (99)
.-.+.+++..++ -.+.|.+||||.
T Consensus 57 ~I~~~l~~a~~~~~DlVittGG~g~ 81 (167)
T 2g2c_A 57 TVVEAIATALKQGARFIITAGGTGI 81 (167)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCC
Confidence 344566666664 688999999985
No 58
>1zdr_A Dihydrofolate reductase; DHFR, NADP, oxidoreductase; 2.00A {Geobacillus stearothermophilus}
Probab=41.32 E-value=21 Score=23.96 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHH
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESL 48 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~al 48 (99)
+..++++.+.+.++-..|+||..+|=.+|
T Consensus 78 ~~~~~l~~l~~~~~~i~viGG~~l~~~~l 106 (164)
T 1zdr_A 78 SLEEVKQWIASRADEVFIIGGAELFRATM 106 (164)
T ss_dssp SHHHHHHHHHTCCSCEEEEECHHHHHHHG
T ss_pred CHHHHHHHHhcCCCeEEEECcHHHHHHHH
Confidence 45566666654567777789999987665
No 59
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=39.81 E-value=24 Score=24.25 Aligned_cols=24 Identities=33% Similarity=0.374 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhc--CCceEEEcccHH
Q psy17228 20 LTKTKIDDILQR--NKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~~--~~~pilVGGTgl 43 (99)
.-.+.+++..++ -.+.|.+||||.
T Consensus 68 ~I~~al~~a~~~~~~DlVittGG~s~ 93 (178)
T 2pjk_A 68 KILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 344556666666 588899999985
No 60
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=39.77 E-value=21 Score=29.47 Aligned_cols=26 Identities=12% Similarity=0.442 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhcC-CceEEEcccHH
Q psy17228 18 IKLTKTKIDDILQRN-KVPIIVGGTNY 43 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~-~~pilVGGTgl 43 (99)
.......++.+.++| ++||+|||..+
T Consensus 163 ~~~m~~~i~~Lr~~g~~i~ViVGGa~~ 189 (579)
T 3bul_A 163 LDEMVNVAKEMERQGFTIPLLIGGATT 189 (579)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEcccc
Confidence 345677777777776 79999999754
No 61
>3j15_A Protein pelota; ribosome recycling, ribosome, archaea, translation-transport complex; HET: ADP; 6.60A {Pyrococcus furiosus}
Probab=38.69 E-value=31 Score=26.42 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=25.3
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-|..+.+.+-..+--.||+||.|++-+.+.+
T Consensus 180 ~~f~~~Vae~~~~~~~~~~v~~iilaGPg~~k~~f~~ 216 (357)
T 3j15_A 180 MKFFHDVAKTMEEVMKRENVEKAIVAGPGFVKEDFYK 216 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEECCSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCEEEEECChHHHHHHHH
Confidence 4566655555555444445668999999999777765
No 62
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=38.44 E-value=11 Score=29.10 Aligned_cols=30 Identities=23% Similarity=0.294 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHHHHhcCC-ce--EEEcccHHH
Q psy17228 15 KWTIKLTKTKIDDILQRNK-VP--IIVGGTNYY 44 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~-~p--ilVGGTglY 44 (99)
.+..+.+.++.+-|.++-. .| =|+||||||
T Consensus 39 ~~~~~~~~~~~~~i~~~~~~~p~igiI~GSGL~ 71 (324)
T 3phb_E 39 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 71 (324)
T ss_dssp SSCHHHHHHHHHHHHTTCCCCCSEEEEECTTCG
T ss_pred cchHHHHHHHHHHHHHhcCCCCcEEEEecCcHH
Confidence 3444556666666655422 22 478999999
No 63
>3agk_A Peptide chain release factor subunit 1; translation; 2.10A {Aeropyrum pernix}
Probab=38.27 E-value=28 Score=26.51 Aligned_cols=34 Identities=15% Similarity=0.136 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHh-----cCCceEEEcccHHHHHHHH
Q psy17228 16 WTIKLTKTKIDDILQ-----RNKVPIIVGGTNYYIESLL 49 (99)
Q Consensus 16 ~~~~~a~~~i~~i~~-----~~~~pilVGGTglYi~all 49 (99)
=|.+.+.+.+.+.+. .+.-|||++|.|+..+.+.
T Consensus 197 ~f~~~V~~~l~~~~~~~~~~~~~~~lilaGp~~~k~~f~ 235 (373)
T 3agk_A 197 EFFKKVGEEASNLLVPLAEKGVLKGVIVAGPGLAKQEFV 235 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEEESTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccCcceEEEECChHHHHHhh
Confidence 344555566666652 4667999999999998887
No 64
>2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis}
Probab=38.13 E-value=26 Score=23.43 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhc-C-CceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQR-N-KVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~-~-~~pilVGGTglYi~all~g~ 52 (99)
+..++++.+.++ + +-.+|.||..+|=..|-.|+
T Consensus 95 dl~~~l~~L~~~~~~~~v~v~GG~~l~~~~l~~gL 129 (178)
T 2xw7_A 95 DVAELHPELVAAAGGKDVWVVGGGDVAAQFVAADL 129 (178)
T ss_dssp CHHHHHHHHHHHTTTSEEEEEECHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhccCCCcEEEEccHHHHHHHHHCCC
Confidence 556677777665 4 55566699999988777764
No 65
>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*
Probab=38.10 E-value=7.5 Score=28.21 Aligned_cols=12 Identities=25% Similarity=0.523 Sum_probs=9.3
Q ss_pred eEEEcccHHHHH
Q psy17228 35 PIIVGGTNYYIE 46 (99)
Q Consensus 35 pilVGGTglYi~ 46 (99)
.-|+||||.|=.
T Consensus 121 lAITGGTGiF~G 132 (195)
T 4h6b_A 121 LAITGGSGIFAG 132 (195)
T ss_dssp EEEEEESGGGTT
T ss_pred EEEecCcceEcc
Confidence 468999999843
No 66
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=37.63 E-value=26 Score=23.78 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=15.6
Q ss_pred HHHHHHHHh-cCCceEEEcccHH
Q psy17228 22 KTKIDDILQ-RNKVPIIVGGTNY 43 (99)
Q Consensus 22 ~~~i~~i~~-~~~~pilVGGTgl 43 (99)
.+.+++..+ +-.+.|.+||||.
T Consensus 56 ~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 56 GEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp HHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHHHhCCCCEEEECCCCCC
Confidence 344555554 5689999999986
No 67
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=36.80 E-value=12 Score=22.88 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=25.6
Q ss_pred hhcccchHHHHHHHHHHHHHHh----cC--CceEEEc-ccHHHHHHHHhc
Q psy17228 9 LKLTKTKWTIKLTKTKIDDILQ----RN--KVPIIVG-GTNYYIESLLWT 51 (99)
Q Consensus 9 ~~~~~~~~~~~~a~~~i~~i~~----~~--~~pilVG-GTglYi~all~g 51 (99)
..||.+-.+..+|...+++.+. +| .+-||.| ||| -++..+..
T Consensus 5 ~~lDLhG~~~~eA~~~l~~fl~~a~~~g~~~v~IIHGkG~G-vLr~~V~~ 53 (83)
T 2zqe_A 5 KEVDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGKGTG-ALRQAIRE 53 (83)
T ss_dssp CEEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCSTTS-HHHHHHHH
T ss_pred cEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCch-HHHHHHHH
Confidence 4577788888877776665544 55 3555557 776 34444433
No 68
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=36.63 E-value=36 Score=22.96 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcC-CceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQRN-KVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~~-~~pilVGGTglYi~all~g~ 52 (99)
.+.+.++.+.++| ++-|+.+++..+++.++.|+
T Consensus 81 g~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 81 GFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp THHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT
T ss_pred cHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC
Confidence 6778888888887 66778899999999999875
No 69
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=36.29 E-value=13 Score=25.78 Aligned_cols=22 Identities=9% Similarity=0.228 Sum_probs=15.3
Q ss_pred cCCceEEEcccHHHHHHHHhcc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~ 52 (99)
.++..+|+||||+==.+|+.-+
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L 26 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVV 26 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHH
Confidence 3566789999998655555543
No 70
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=36.28 E-value=19 Score=24.48 Aligned_cols=30 Identities=13% Similarity=0.152 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhc-CCceEEEcccHHHHHHH
Q psy17228 19 KLTKTKIDDILQR-NKVPIIVGGTNYYIESL 48 (99)
Q Consensus 19 ~~a~~~i~~i~~~-~~~pilVGGTglYi~al 48 (99)
.+..++++.+.++ ++-.+|+||..+|=.+|
T Consensus 77 ~~~~~~l~~lk~~~~~~i~viGG~~l~~~~l 107 (162)
T 3dfr_A 77 HDVAAVFAYAKQHLDQELVIAGGAQIFTAFK 107 (162)
T ss_dssp SSHHHHHHHHHHCCSSCEEECCCHHHHHHTG
T ss_pred CCHHHHHHHHhcCCCCCEEEECCHHHHHHHH
Confidence 4566677777666 56677889999996655
No 71
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=35.65 E-value=37 Score=25.19 Aligned_cols=27 Identities=15% Similarity=0.274 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhcC---CceEEEcccHH
Q psy17228 17 TIKLTKTKIDDILQRN---KVPIIVGGTNY 43 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~---~~pilVGGTgl 43 (99)
......+.++.+.++| ++||+|||..+
T Consensus 196 ~~~~~~~~i~~L~~~g~~~~i~vivGG~~~ 225 (262)
T 1xrs_B 196 HIQNMTHLIELLEAEGLRDRFVLLCGGPRI 225 (262)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSEEEEECTTC
T ss_pred hHHHHHHHHHHHHhcCCCCCCEEEEECCcC
Confidence 3456677777777766 48999999754
No 72
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=35.36 E-value=31 Score=24.21 Aligned_cols=24 Identities=13% Similarity=0.350 Sum_probs=16.7
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+.+... +-.+.|.+||||.
T Consensus 53 ~I~~al~~a~~~~~~DlVitTGGtg~ 78 (195)
T 1di6_A 53 IIEQTLCELVDEMSCHLVLTTGGTGP 78 (195)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34455666665 4678899999985
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=35.05 E-value=11 Score=26.53 Aligned_cols=16 Identities=25% Similarity=0.372 Sum_probs=10.6
Q ss_pred eEEEcccHHHHHHHHh
Q psy17228 35 PIIVGGTNYYIESLLW 50 (99)
Q Consensus 35 pilVGGTglYi~all~ 50 (99)
.+|+|||||==.+|+.
T Consensus 3 ILVTGatGfIG~~L~~ 18 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQ 18 (298)
T ss_dssp EEEETTTSHHHHHHHH
T ss_pred EEEECCCCHHHHHHHH
Confidence 4688999985444443
No 74
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=34.88 E-value=13 Score=26.23 Aligned_cols=22 Identities=5% Similarity=0.306 Sum_probs=16.0
Q ss_pred cCCceEEEcccHHHHHHHHhcc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~ 52 (99)
.++..+|+||||+==.+|+..+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L 31 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQL 31 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHH
Confidence 4677899999998666665543
No 75
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.82 E-value=13 Score=25.21 Aligned_cols=22 Identities=18% Similarity=0.242 Sum_probs=16.5
Q ss_pred cCCceEEEcccHHHHHHHHhcc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~ 52 (99)
+|+..+|+||||+==.+++..+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L 41 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSEL 41 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHH
T ss_pred CCCeEEEECCCChHHHHHHHHH
Confidence 5788899999998766666654
No 76
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=34.49 E-value=8 Score=28.55 Aligned_cols=9 Identities=44% Similarity=0.759 Sum_probs=7.6
Q ss_pred EEEcccHHH
Q psy17228 36 IIVGGTNYY 44 (99)
Q Consensus 36 ilVGGTglY 44 (99)
=|+||||||
T Consensus 19 giI~GSGl~ 27 (259)
T 3ozb_A 19 AIIGGTGLT 27 (259)
T ss_dssp EEEECTTST
T ss_pred EEEccCCcc
Confidence 367999998
No 77
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=34.47 E-value=13 Score=26.65 Aligned_cols=21 Identities=5% Similarity=0.131 Sum_probs=13.1
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.++..+|+||||+==.+|+..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~ 38 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAA 38 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHH
Confidence 567789999999865555443
No 78
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=34.36 E-value=14 Score=26.25 Aligned_cols=19 Identities=21% Similarity=-0.008 Sum_probs=13.4
Q ss_pred CCceEEEcccHHHHHHHHh
Q psy17228 32 NKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~ 50 (99)
++..+|+||||+==.+|+.
T Consensus 3 ~~~vlVtGatG~iG~~l~~ 21 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAK 21 (345)
T ss_dssp CCEEEEETTTSHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHH
Confidence 5678899999985444443
No 79
>2vgn_A DOM34; translation termination factor, protein biosynthesis, translation regulation, cell division, mRNA degradation; 2.5A {Saccharomyces cerevisiae} SCOP: b.38.4.1 c.55.4.2 d.79.3.2 PDB: 2vgm_A 3izq_0 3j16_A*
Probab=34.24 E-value=29 Score=26.88 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=23.1
Q ss_pred chHHHHHHHHHHHHHHh-cCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQ-RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~-~~~~pilVGGTglYi~all~ 50 (99)
+.||. .+.+.+.+.+. .+-.+||+||.|++-+-+.+
T Consensus 189 ~~F~~-~V~~~l~~~~~~~~v~~lIlaGPg~~k~~f~~ 225 (386)
T 2vgn_A 189 EKFYK-AIYSAMKKDLNFDKLKTIILCSPGFYAKILMD 225 (386)
T ss_dssp HHHHH-HHHHHHHHHCCTTTCSEEEEEESTTHHHHHHH
T ss_pred HHHHH-HHHHHHHHHhcccCCcEEEEECCHHHHHHHHH
Confidence 35554 44455555553 34579999999997776653
No 80
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=33.97 E-value=20 Score=28.13 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=14.1
Q ss_pred HHHHHHHHHhc-CC--ceEEEcccHHHH
Q psy17228 21 TKTKIDDILQR-NK--VPIIVGGTNYYI 45 (99)
Q Consensus 21 a~~~i~~i~~~-~~--~pilVGGTglYi 45 (99)
+.++.+.|.++ +. ..-|+||||||-
T Consensus 95 ~~~a~~~i~~~~~~~p~igIIgGSGL~~ 122 (373)
T 2p4s_A 95 LQEIATYLLERTELRPKVGIICGSGLGT 122 (373)
T ss_dssp HHHHHHHHHHHCCCCCSEEEEECTTCTH
T ss_pred HHHHHHHHHhccCCCCcEEEECCccHhH
Confidence 33444444444 22 245779999993
No 81
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=33.84 E-value=14 Score=26.37 Aligned_cols=19 Identities=32% Similarity=0.517 Sum_probs=13.4
Q ss_pred CCceEEEcccHHHHHHHHh
Q psy17228 32 NKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~ 50 (99)
++..+|+|||||==.+|+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~ 27 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVK 27 (338)
T ss_dssp CCEEEEECTTSHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHH
Confidence 5667899999985444443
No 82
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=33.68 E-value=36 Score=22.85 Aligned_cols=24 Identities=17% Similarity=0.315 Sum_probs=16.2
Q ss_pred HHHHHHHHHHh--cCCceEEEcccHH
Q psy17228 20 LTKTKIDDILQ--RNKVPIIVGGTNY 43 (99)
Q Consensus 20 ~a~~~i~~i~~--~~~~pilVGGTgl 43 (99)
.-.+.+++..+ +-.+.|.+||||.
T Consensus 58 ~i~~~l~~~~~~~~~DlVittGG~g~ 83 (167)
T 1uuy_A 58 RIKDILQKWSDVDEMDLILTLGGTGF 83 (167)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34455666553 5688899999964
No 83
>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A
Probab=33.36 E-value=7 Score=28.25 Aligned_cols=13 Identities=23% Similarity=0.414 Sum_probs=9.9
Q ss_pred ceEEEcccHHHHH
Q psy17228 34 VPIIVGGTNYYIE 46 (99)
Q Consensus 34 ~pilVGGTglYi~ 46 (99)
..-|+||||.|=.
T Consensus 112 ~LAITGGTGif~g 124 (188)
T 2brj_A 112 FLAITGGAGIFEG 124 (188)
T ss_dssp EEEEEEEEETTTT
T ss_pred eeeEecCcceEcc
Confidence 3468999999943
No 84
>3obw_A Protein pelota homolog; SM fold, hydrolase; 2.60A {Sulfolobus solfataricus}
Probab=33.21 E-value=46 Score=25.65 Aligned_cols=37 Identities=11% Similarity=0.254 Sum_probs=24.1
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-|..+.+.+-..+--.||+||.|++-+-+.+
T Consensus 187 ~~f~~~V~e~~~~~~~~~~v~~iIlaGPg~~K~~f~~ 223 (364)
T 3obw_A 187 EQNALEIATELAEYVKQYDPDAILLAGPGFFKEEVSK 223 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEECSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCEEEEECChHHHHHHHH
Confidence 3566555555444332234458999999999887776
No 85
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=32.34 E-value=15 Score=25.67 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=14.3
Q ss_pred CCceEEEcccHHHHHHHHhc
Q psy17228 32 NKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g 51 (99)
++..+|+||||+==.+|+.-
T Consensus 7 ~~~vlVtGatG~iG~~l~~~ 26 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARA 26 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHH
T ss_pred CCeEEEECCCChHHHHHHHH
Confidence 56788999999865555443
No 86
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=32.17 E-value=14 Score=26.96 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=14.2
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.+...+|+|||||==.+|+.-
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~ 30 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALH 30 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHH
T ss_pred CCCeEEEeCCCcHHHHHHHHH
Confidence 466778899999875555544
No 87
>3mca_B Protein DOM34, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe}
Probab=32.13 E-value=29 Score=26.99 Aligned_cols=37 Identities=8% Similarity=0.043 Sum_probs=23.4
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-|..+.+.+-..+--.||++|.|++-+.+..
T Consensus 183 ~~F~~~V~e~l~~~~d~~~v~~iIlaGPgf~K~~f~~ 219 (390)
T 3mca_B 183 DKFYDSVFQSINSEFDFDKLKVVILASPGFVARGLYD 219 (390)
T ss_dssp HHHHHHHHHHHHHHCCTTTCSEEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCcEEEEECChHHHHHHHH
Confidence 3555555555444332234568999999998776654
No 88
>3agj_B Protein pelota homolog; GTP binding, translation-hydrolase complex; HET: GTP; 2.30A {Aeropyrum pernix}
Probab=31.65 E-value=47 Score=25.36 Aligned_cols=37 Identities=11% Similarity=0.170 Sum_probs=23.5
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-|..+.+.+-..+--+||++|.|++-+-+..
T Consensus 174 ~~f~~~Va~~l~~~~~~~~~~~lIlAGpg~~k~~f~~ 210 (358)
T 3agj_B 174 EKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAE 210 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCcEEEEECCHHHHHHHHH
Confidence 3555544444433332345679999999998877754
No 89
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=31.61 E-value=38 Score=23.67 Aligned_cols=23 Identities=17% Similarity=0.352 Sum_probs=16.2
Q ss_pred HHHHHHHHH-hcCCceEEEcccHH
Q psy17228 21 TKTKIDDIL-QRNKVPIIVGGTNY 43 (99)
Q Consensus 21 a~~~i~~i~-~~~~~pilVGGTgl 43 (99)
-.+.+++.. ++-.+.|.+||||.
T Consensus 78 I~~al~~a~~~~~DlVIttGGts~ 101 (185)
T 3rfq_A 78 IRNALNTAVIGGVDLVVSVGGTGV 101 (185)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHHHHhCCCCEEEECCCCCC
Confidence 344555554 46688999999986
No 90
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=31.50 E-value=64 Score=21.16 Aligned_cols=34 Identities=3% Similarity=0.086 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcC-CceEEEcccHHHHHHHHhcc
Q psy17228 19 KLTKTKIDDILQRN-KVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 19 ~~a~~~i~~i~~~~-~~pilVGGTglYi~all~g~ 52 (99)
..+.+.++.+.++| ++-|+.||...+++.++..+
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 46778899888887 45566689999999998764
No 91
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=30.38 E-value=15 Score=28.46 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=15.6
Q ss_pred CCceEEEcccHHHHHHHHhccc
Q psy17228 32 NKVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g~~ 53 (99)
-++.+|-||||+. .++.|+.
T Consensus 11 ~kIVvigGGtGl~--~ll~gLk 30 (341)
T 2p0y_A 11 PKIVVIGGGTGLP--VVLNGLR 30 (341)
T ss_dssp CEEEEECCGGGHH--HHHHHHH
T ss_pred CeEEEECCcccHH--HHHHHHH
Confidence 4778888999998 6777753
No 92
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=30.15 E-value=18 Score=25.56 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=14.1
Q ss_pred CCceEEEcccHHHHHHHHhc
Q psy17228 32 NKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g 51 (99)
++..+|+||||+==.+|+.-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~ 21 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKE 21 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHH
Confidence 45678999999865555543
No 93
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=29.89 E-value=47 Score=19.77 Aligned_cols=36 Identities=3% Similarity=-0.042 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhcCC-ceEEEcccHHHHHHHHhcc
Q psy17228 17 TIKLTKTKIDDILQRNK-VPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~-~pilVGGTglYi~all~g~ 52 (99)
....+.+.++.+.++|. +-|+.+++..+++.++..+
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC
Confidence 34568888999988874 5566788888877777654
No 94
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=29.77 E-value=17 Score=27.92 Aligned_cols=19 Identities=32% Similarity=0.380 Sum_probs=15.5
Q ss_pred CceEEEcccHHHHHHHHhccc
Q psy17228 33 KVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 33 ~~pilVGGTglYi~all~g~~ 53 (99)
++.+|.||||+. .++.|+.
T Consensus 6 kiv~lgGGtGl~--~ll~gL~ 24 (323)
T 2o2z_A 6 NVIVFGGGTGLS--VLLRGLK 24 (323)
T ss_dssp EEEEEECSHHHH--HHHHHHT
T ss_pred eEEEECCcccHH--HHHHHHH
Confidence 678899999998 7777764
No 95
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=29.54 E-value=15 Score=28.18 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=15.4
Q ss_pred CCceEEEcccHHHHHHHHhccc
Q psy17228 32 NKVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g~~ 53 (99)
-++.+|-||||+. .++.|+.
T Consensus 5 ~~IV~igGGtGl~--~ll~gLk 24 (326)
T 2q7x_A 5 PXITVIGGGTGSP--VILXSLR 24 (326)
T ss_dssp CEEEEECCCTTHH--HHHHHHH
T ss_pred CeEEEEcCcccHH--HHHHHhc
Confidence 3677888999998 6777753
No 96
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=29.36 E-value=38 Score=24.72 Aligned_cols=30 Identities=7% Similarity=-0.013 Sum_probs=21.2
Q ss_pred HHHHHHHHhcC-CceEEEcc---cHHHHHHHHhc
Q psy17228 22 KTKIDDILQRN-KVPIIVGG---TNYYIESLLWT 51 (99)
Q Consensus 22 ~~~i~~i~~~~-~~pilVGG---TglYi~all~g 51 (99)
.+.++++.+.- .+|++||| |.==++.++.|
T Consensus 170 ~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~g 203 (240)
T 1viz_A 170 IEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEH 203 (240)
T ss_dssp HHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHhC
Confidence 45677787777 89999987 44455555554
No 97
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=28.63 E-value=18 Score=25.67 Aligned_cols=20 Identities=15% Similarity=0.004 Sum_probs=13.1
Q ss_pred cCCceEEEcccHHHHHHHHh
Q psy17228 31 RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~ 50 (99)
.++..+|+||||+==.+|+.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~ 32 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAK 32 (335)
T ss_dssp --CEEEEETTTSHHHHHHHH
T ss_pred cCCeEEEECCCChHHHHHHH
Confidence 45677889999986555544
No 98
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=28.47 E-value=52 Score=21.94 Aligned_cols=33 Identities=9% Similarity=0.063 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
..+.+.++.+.++|++-|+.+|+.-+++.++..
T Consensus 99 ~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~ 131 (231)
T 2p11_A 99 PGALNALRHLGARGPTVILSDGDVVFQPRKIAR 131 (231)
T ss_dssp TTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHH
T ss_pred ccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 367888999988887788889998888888764
No 99
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=28.44 E-value=46 Score=22.02 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhc-CCceEEEcccHHHHHHH
Q psy17228 20 LTKTKIDDILQR-NKVPIIVGGTNYYIESL 48 (99)
Q Consensus 20 ~a~~~i~~i~~~-~~~pilVGGTglYi~al 48 (99)
+..++++.+.++ ++-..|+||..+|=.+|
T Consensus 81 ~~~~~l~~l~~~~~~~i~viGG~~l~~~~l 110 (162)
T 1vdr_A 81 SVEEAVDIAASLDAETAYVIGGAAIYALFQ 110 (162)
T ss_dssp SHHHHHHHHHHTTCSCEEEEECHHHHHHHG
T ss_pred CHHHHHHHHHhCCCCcEEEECCHHHHHHHH
Confidence 455666666554 56667779988986654
No 100
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=28.41 E-value=13 Score=26.52 Aligned_cols=21 Identities=10% Similarity=0.227 Sum_probs=13.5
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.++..+|+|||||==.+|+.-
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~ 24 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMR 24 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHH
Confidence 467788889999865555443
No 101
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=28.30 E-value=20 Score=25.66 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=14.6
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
+++..+|+||||+==.+|+..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~ 39 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEH 39 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHH
Confidence 356788999999865555543
No 102
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=28.21 E-value=20 Score=25.79 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=14.6
Q ss_pred cCCceEEEcccHHHHHHHHh
Q psy17228 31 RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~ 50 (99)
.++..+|+||||+==.+|+.
T Consensus 8 ~~~~vlVtGatG~iG~~l~~ 27 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSL 27 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHH
Confidence 46778999999986555544
No 103
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=28.08 E-value=54 Score=22.04 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhcC-CceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQRN-KVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~~-~~pilVGGTglYi~all~g~ 52 (99)
+..++++.+.+++ +-.+|.||..+|=..|-.|+
T Consensus 97 ~l~~~l~~l~~~~~~~i~v~GG~~l~~~~l~~~l 130 (178)
T 3jtw_A 97 SPVELVKRIQKEKGKDVWIVGGAKIIDPLVQANL 130 (178)
T ss_dssp CHHHHHHHHHTSSCCEEEEEECHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCEEEEEChHHHHHHHHHCCC
Confidence 5566777777665 44556799999987775564
No 104
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=28.01 E-value=33 Score=24.59 Aligned_cols=17 Identities=29% Similarity=0.573 Sum_probs=14.6
Q ss_pred HHHHhcCCceEEEcccH
Q psy17228 26 DDILQRNKVPIIVGGTN 42 (99)
Q Consensus 26 ~~i~~~~~~pilVGGTg 42 (99)
..+++.|.+||+.||+|
T Consensus 137 ~~lL~~g~IpVi~~~~g 153 (256)
T 2va1_A 137 KKAIEKEQVMIFVAGTG 153 (256)
T ss_dssp HHHHHTTCEEEEESTTS
T ss_pred HHHHhCCcEEEEECCCC
Confidence 46788999999999776
No 105
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=28.01 E-value=21 Score=24.06 Aligned_cols=20 Identities=30% Similarity=0.273 Sum_probs=14.4
Q ss_pred cCCceEEEcccHHHHHHHHh
Q psy17228 31 RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~ 50 (99)
.++..+|+||||+==.++..
T Consensus 17 ~~~~vlVtGasg~iG~~l~~ 36 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLK 36 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHH
Confidence 57788999999875455443
No 106
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=27.94 E-value=53 Score=24.02 Aligned_cols=23 Identities=35% Similarity=0.609 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhcCCceEEEcccH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTN 42 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTg 42 (99)
+++...|++..+ .+++|+.|||-
T Consensus 175 ~ev~~~IR~~l~-~~vrIlYGGSV 197 (233)
T 2jgq_A 175 YLTHGFLKQILN-QKTPLLYGGSV 197 (233)
T ss_dssp HHHHHHHHHHSC-TTSCEEEESSC
T ss_pred HHHHHHHHHHHh-cCCcEEEcCCc
Confidence 444444444443 57999999974
No 107
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=27.65 E-value=45 Score=23.54 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhcCCceEEEcc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGG 40 (99)
.+.+.|+.+++.|.+||+.||
T Consensus 109 ~~~~~i~~ll~~g~ipVi~~~ 129 (251)
T 2ako_A 109 HAKNAIDMMINLGILPIINEN 129 (251)
T ss_dssp HHHHHHHHHHHTTCEEEEEEC
T ss_pred hHHHHHHHHHHCCCEEEEeCC
Confidence 455788999999999999976
No 108
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=27.50 E-value=37 Score=24.69 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=19.4
Q ss_pred HHHHHHHHhcC-CceEEEcc---cHHHHHHHHhc
Q psy17228 22 KTKIDDILQRN-KVPIIVGG---TNYYIESLLWT 51 (99)
Q Consensus 22 ~~~i~~i~~~~-~~pilVGG---TglYi~all~g 51 (99)
.+.++++.+.- .+|++||| |.==++.++.|
T Consensus 178 ~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~g 211 (234)
T 2f6u_A 178 PELVAEVKKVLDKARLFYGGGIDSREKAREMLRY 211 (234)
T ss_dssp HHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhC
Confidence 45677777777 89999987 33344444443
No 109
>3oby_A Protein pelota homolog; SM fold, hydrolase; 2.90A {Archaeoglobus fulgidus}
Probab=27.44 E-value=73 Score=24.44 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=22.6
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-+..+.+ . +--.||+||.|++-+-+.+
T Consensus 170 ~~F~~~V~e~~~~-~---~v~~iIlaGPg~~K~~f~~ 202 (352)
T 3oby_A 170 KEFFGEVAAKLES-F---DFKYLIVAGPGFAKNDFLD 202 (352)
T ss_dssp CCHHHHHHHHHHH-H---CCSEEEEECSTTHHHHHHH
T ss_pred HHHHHHHHHHHHh-c---CCCEEEEECCHHHHHHHHH
Confidence 5666655544444 3 5668999999998776654
No 110
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=27.14 E-value=59 Score=23.93 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhcCCceEEEcc
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGG 40 (99)
.+..+.++.+.+..++||+|||
T Consensus 185 ~~~~~~v~~vr~~~~~Pv~vGf 206 (252)
T 3tha_A 185 AILQDKVKEIRSFTNLPIFVGF 206 (252)
T ss_dssp HHHHHHHHHHHTTCCSCEEEES
T ss_pred HHHHHHHHHHHHhcCCcEEEEc
Confidence 4567788888888889999985
No 111
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=26.99 E-value=23 Score=23.73 Aligned_cols=21 Identities=5% Similarity=0.001 Sum_probs=14.7
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.++..+|+||||+==.+++.-
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~ 23 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKK 23 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHH
Confidence 466788999999865555544
No 112
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=26.98 E-value=22 Score=25.71 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=13.0
Q ss_pred CCceEEEcccHHHHHHHHh
Q psy17228 32 NKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~ 50 (99)
++..+|+||||+==.+|+.
T Consensus 24 ~~~vlVtGatG~iG~~l~~ 42 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSK 42 (372)
T ss_dssp CCEEEEESCSSHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHH
Confidence 5678899999985444433
No 113
>3i3v_A Probable secreted solute-binding lipoprotein; transporter, PSI-II, structural genomics, protein structure initiative; 2.30A {Streptomyces coelicolor}
Probab=26.87 E-value=47 Score=24.14 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=24.8
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHH
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYI 45 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi 45 (99)
-|.+-.+..+.++.+.+.|..|+..||.+.+.
T Consensus 143 ~P~Twdel~~~~~~~~~~g~~~~~~~~~~~~~ 174 (405)
T 3i3v_A 143 IPTTGDQLIAAARKLRAKGIAPVTVGGNDWTG 174 (405)
T ss_dssp CCCBHHHHHHHHHHHHHTTCEEEECCTTSHHH
T ss_pred CCCCHHHHHHHHHHHHHcCceeeEecCCCCch
Confidence 35566788888888888999999998855443
No 114
>2d4u_A Methyl-accepting chemotaxis protein I; helix-turn-helix, signaling protein; 1.95A {Escherichia coli} PDB: 3atp_A
Probab=26.86 E-value=8.1 Score=24.94 Aligned_cols=11 Identities=27% Similarity=0.504 Sum_probs=8.7
Q ss_pred eEEEcccHHHH
Q psy17228 35 PIIVGGTNYYI 45 (99)
Q Consensus 35 pilVGGTglYi 45 (99)
|++|||.|+|-
T Consensus 2 ~l~~g~lg~~~ 12 (176)
T 2d4u_A 2 PLGSGGLFFNA 12 (176)
T ss_dssp CCCHHHHHHHH
T ss_pred CcchhhHHHHH
Confidence 77888888874
No 115
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=26.71 E-value=70 Score=22.65 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcC-CceEEEcccHHHHHHHHhccc
Q psy17228 20 LTKTKIDDILQRN-KVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 20 ~a~~~i~~i~~~~-~~pilVGGTglYi~all~g~~ 53 (99)
.+.+.++.+.++| .+-|+.||-..+++++...+-
T Consensus 145 g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 145 GYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp THHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 4678888888888 455666999999999998653
No 116
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=26.52 E-value=55 Score=24.20 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhcCCceEEEcc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGG 40 (99)
+..+.++.+.+..++||+|||
T Consensus 195 ~~~~~v~~vr~~~~~Pv~vGf 215 (271)
T 3nav_A 195 PVHALLERLQQFDAPPALLGF 215 (271)
T ss_dssp HHHHHHHHHHHTTCCCEEECS
T ss_pred hHHHHHHHHHHhcCCCEEEEC
Confidence 456778888777889999964
No 117
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=26.44 E-value=18 Score=25.20 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=14.9
Q ss_pred CCceEEEcccHHHHHHHHhcc
Q psy17228 32 NKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g~ 52 (99)
.+..+|+||||+==.+|+.-+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L 32 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQL 32 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHH
T ss_pred cceEEEECCCChHHHHHHHHH
Confidence 456788999998766665543
No 118
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=26.35 E-value=14 Score=26.23 Aligned_cols=41 Identities=10% Similarity=0.097 Sum_probs=14.6
Q ss_pred hhhhhhhcccchHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 4 KKQWRLKLTKTKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 4 ~~~~~~~~~~~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+++|+-.-+....|...- .. -.|++.+|+||||.-=.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~m----~~--l~gk~vlVTGas~gIG~aia~ 46 (266)
T 3uxy_A 6 HHSSGVDLGTENLYFQSM----QG--FEGKVALVTGAAGGIGGAVVT 46 (266)
T ss_dssp --------------------------CTTCEEEESSTTSHHHHHHHH
T ss_pred cCCCCCCCCCCCcchhhh----hC--CCCCEEEEeCCCcHHHHHHHH
Confidence 445555555555444332 11 268999999999864444433
No 119
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=26.30 E-value=19 Score=27.91 Aligned_cols=19 Identities=32% Similarity=0.349 Sum_probs=15.8
Q ss_pred CceEEEcccHHHHHHHHhccc
Q psy17228 33 KVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 33 ~~pilVGGTglYi~all~g~~ 53 (99)
++.+|.||||+. .++.|+.
T Consensus 6 kIv~lgGGtGl~--~ll~gLk 24 (332)
T 2ppv_A 6 NVVLIGGGTGLS--VLARGLR 24 (332)
T ss_dssp EEEEEECHHHHH--HHHHHHT
T ss_pred eEEEEcCcccHH--HHHHHHH
Confidence 678889999988 7888864
No 120
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=26.14 E-value=22 Score=25.66 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=13.4
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.++..+|+||||+==.+|+.-
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~ 65 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKA 65 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHH
Confidence 356788999999865555544
No 121
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=26.08 E-value=22 Score=25.33 Aligned_cols=19 Identities=16% Similarity=0.351 Sum_probs=12.8
Q ss_pred CCceEEEcccHHHHHHHHh
Q psy17228 32 NKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~ 50 (99)
++..+|+||||+==.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~ 20 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVL 20 (348)
T ss_dssp CSEEEEETTTSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHH
Confidence 3567899999985444443
No 122
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=25.95 E-value=19 Score=25.88 Aligned_cols=20 Identities=35% Similarity=0.303 Sum_probs=14.2
Q ss_pred CceEEEcccHHHHHHHHhcc
Q psy17228 33 KVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 33 ~~pilVGGTglYi~all~g~ 52 (99)
+..+|+||||+==.+|+.-+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L 21 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEIL 21 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHH
Confidence 34688899998766666543
No 123
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.60 E-value=24 Score=23.15 Aligned_cols=20 Identities=30% Similarity=0.232 Sum_probs=13.5
Q ss_pred cCCceEEEcccHHHHHHHHh
Q psy17228 31 RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~ 50 (99)
.++..+|+||||+==.+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~ 23 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLD 23 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHH
T ss_pred CCceEEEECCCcHHHHHHHH
Confidence 35668899999985444443
No 124
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=25.54 E-value=78 Score=25.16 Aligned_cols=21 Identities=29% Similarity=0.616 Sum_probs=16.7
Q ss_pred cCCceEEEc-ccHHHHHHHHhc
Q psy17228 31 RNKVPIIVG-GTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVG-GTglYi~all~g 51 (99)
-|+.||+|| +.||..+.++-.
T Consensus 222 lGk~~v~v~d~pGfi~Nril~~ 243 (460)
T 3k6j_A 222 IKKLPVLVGNCKSFVFNRLLHV 243 (460)
T ss_dssp TTCEEEEESSCCHHHHHHHHHH
T ss_pred hCCEEEEEecccHHHHHHHHHH
Confidence 489999997 578888877754
No 125
>3nzb_X Dihydrofolate reductase; pneumocystius carinii DHFR inhibitor complexes, oxidoreducta oxidoreductase-oxidoreductase inhibitor complex; HET: D2N NAP; 1.45A {Pneumocystis carinii} SCOP: c.71.1.1 PDB: 1daj_A* 1cd2_A* 1e26_A* 1klk_A* 1ly3_A* 1ly4_A* 1s3y_A* 2cd2_A* 2fzh_A* 1dyr_A* 3cd2_A* 3nz6_X* 3nz9_X* 3nza_X* 2fzi_A* 3nzc_X* 3td8_A* 4cd2_A* 1vj3_A*
Probab=25.01 E-value=40 Score=23.73 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhc--------CCceEEEcccHHHHHHHHhc
Q psy17228 19 KLTKTKIDDILQR--------NKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 19 ~~a~~~i~~i~~~--------~~~pilVGGTglYi~all~g 51 (99)
.+..++++.+.+. ++-..|+||..+|=.+|-.|
T Consensus 96 ~sl~eal~~l~~~~~~~~~~~~~~i~ViGG~~iy~~~L~~~ 136 (206)
T 3nzb_X 96 KSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHP 136 (206)
T ss_dssp SSHHHHHHHHHHHSCSSSSSEEEEEEECCCHHHHHHHHHST
T ss_pred CCHHHHHHHHhccccccccCCCCcEEEECcHHHHHHHhhCC
Confidence 3455556665543 45667889999998887434
No 126
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.94 E-value=23 Score=24.91 Aligned_cols=20 Identities=15% Similarity=0.101 Sum_probs=12.5
Q ss_pred cCCceEEEcccHHHHHHHHh
Q psy17228 31 RNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~ 50 (99)
..+..+|+||||+==.+|+.
T Consensus 11 ~~~~vlVTGatG~iG~~l~~ 30 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLAN 30 (321)
T ss_dssp --CEEEEETTTSHHHHHHHH
T ss_pred CcceEEEECCCChHHHHHHH
Confidence 34667888999985444443
No 127
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=24.88 E-value=40 Score=23.23 Aligned_cols=19 Identities=11% Similarity=0.242 Sum_probs=15.4
Q ss_pred HHHHHHHhcCCceEEEccc
Q psy17228 23 TKIDDILQRNKVPIIVGGT 41 (99)
Q Consensus 23 ~~i~~i~~~~~~pilVGGT 41 (99)
+.+..+++.|.+||+.||.
T Consensus 93 ~~i~~ll~~g~ipVi~~g~ 111 (219)
T 2ij9_A 93 MEAEELSKLYRVVVMGGTF 111 (219)
T ss_dssp HHHHHHHTTCSEEEECCCS
T ss_pred HHHHHHHHCCCEEEEeCCC
Confidence 3467888999999998853
No 128
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=24.87 E-value=79 Score=24.03 Aligned_cols=35 Identities=17% Similarity=0.012 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhcCCceEEEc-ccHHHHHHHHhc
Q psy17228 17 TIKLTKTKIDDILQRNKVPIIVG-GTNYYIESLLWT 51 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~~~pilVG-GTglYi~all~g 51 (99)
..++..+.+++-.++|+..|-+| |||+.-++.-.|
T Consensus 12 ~r~~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~g 47 (286)
T 2p10_A 12 TRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAG 47 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCceEEEecccchhhHHHHhC
Confidence 34566667777777788777775 999999998877
No 129
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=24.81 E-value=42 Score=25.19 Aligned_cols=23 Identities=13% Similarity=0.224 Sum_probs=17.7
Q ss_pred cCCceEEEcccHHHHHHHHhccc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~~ 53 (99)
+++..+|+||||+==.+|+..+.
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~ 56 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIF 56 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHH
T ss_pred CCCEEEEEcCChHHHHHHHHHHH
Confidence 47889999999987667766653
No 130
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=24.73 E-value=23 Score=23.02 Aligned_cols=20 Identities=15% Similarity=-0.001 Sum_probs=12.8
Q ss_pred CCceEEEcccHH-HHHHHHhc
Q psy17228 32 NKVPIIVGGTNY-YIESLLWT 51 (99)
Q Consensus 32 ~~~pilVGGTgl-Yi~all~g 51 (99)
+++.+|.||||. -+.++++.
T Consensus 19 ~~~llIaGG~GiaPl~sm~~~ 39 (142)
T 3lyu_A 19 GKILAIGAYTGIVEVYPIAKA 39 (142)
T ss_dssp SEEEEEEETTHHHHHHHHHHH
T ss_pred CeEEEEECcCcHHHHHHHHHH
Confidence 566778899994 23344443
No 131
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.72 E-value=23 Score=24.60 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=11.0
Q ss_pred cCCceEEEcccHH
Q psy17228 31 RNKVPIIVGGTNY 43 (99)
Q Consensus 31 ~~~~pilVGGTgl 43 (99)
+|++.+|+||||+
T Consensus 6 ~~k~vlVTGasg~ 18 (266)
T 3oig_A 6 EGRNIVVMGVANK 18 (266)
T ss_dssp TTCEEEEECCCST
T ss_pred CCCEEEEEcCCCC
Confidence 5788999999876
No 132
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=24.67 E-value=68 Score=20.63 Aligned_cols=29 Identities=10% Similarity=0.162 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEcccHH
Q psy17228 15 KWTIKLTKTKIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 15 ~~~~~~a~~~i~~i~~~~~~pilVGGTgl 43 (99)
.+|.....+++..+.......|.+||+-.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~vi~~gg~~~ 86 (185)
T 3trf_A 58 AGFRRREREMIEALCKLDNIILATGGGVV 86 (185)
T ss_dssp HHHHHHHHHHHHHHHHSSSCEEECCTTGG
T ss_pred HHHHHHHHHHHHHHHhcCCcEEecCCcee
Confidence 45666666788888777777777776543
No 133
>2qi2_A Pelota, cell division protein pelota related protein; DOM34, cell cycle; 2.90A {Thermoplasma acidophilum} SCOP: b.38.4.1 c.55.4.2 d.79.3.2
Probab=24.64 E-value=39 Score=25.87 Aligned_cols=32 Identities=9% Similarity=0.245 Sum_probs=21.5
Q ss_pred chHHHHHHHHHHHHHHhcCCceEEEcccHHHHHHHHh
Q psy17228 14 TKWTIKLTKTKIDDILQRNKVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 14 ~~~~~~~a~~~i~~i~~~~~~pilVGGTglYi~all~ 50 (99)
+.||.+-+. .+.+. + .+||++|.|++-+-+.+
T Consensus 175 ~~F~~~V~~-~~~~~---d-~~lIlaGPg~~k~~f~~ 206 (347)
T 2qi2_A 175 ASYFDQIVN-ALKNY---S-NSIIILGPGFARDRFAR 206 (347)
T ss_dssp HHHHHHHHH-HHHTC---C-SCEEEEESSSHHHHHHH
T ss_pred HHHHHHHHH-HHHhc---C-CeEEEECCHHHHHHHHH
Confidence 455554443 33333 3 89999999999888754
No 134
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=24.51 E-value=24 Score=22.91 Aligned_cols=13 Identities=15% Similarity=0.176 Sum_probs=10.4
Q ss_pred cCCceEEEcccHH
Q psy17228 31 RNKVPIIVGGTNY 43 (99)
Q Consensus 31 ~~~~pilVGGTgl 43 (99)
...+.+|.||||.
T Consensus 17 ~~~~vlIagG~GI 29 (186)
T 3a1f_A 17 YEVVMLVGAGIGV 29 (186)
T ss_dssp SSEEEEEEEGGGH
T ss_pred CCeEEEEecCccH
Confidence 4567888899996
No 135
>1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3ntz_A* 3nu0_A* ...
Probab=24.45 E-value=27 Score=23.95 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhc-----CCceEEEcccHHHHHHHHhcc
Q psy17228 19 KLTKTKIDDILQR-----NKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 19 ~~a~~~i~~i~~~-----~~~pilVGGTglYi~all~g~ 52 (99)
.+..++++.+.+. ++-..|+||..+|=.+|-.|+
T Consensus 91 ~~~~~al~~lk~~~~~~~~~~i~ViGG~~l~~~~l~~~l 129 (186)
T 1kmv_A 91 RSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPG 129 (186)
T ss_dssp SSHHHHHHHHTSTTTTTTEEEEEECCCHHHHHHHHTSCS
T ss_pred CCHHHHHHHHhhcccccCCCeEEEEcCHHHHHHHhcCCC
Confidence 3455666666543 455666799999988885553
No 136
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=24.42 E-value=29 Score=25.16 Aligned_cols=20 Identities=15% Similarity=0.177 Sum_probs=16.3
Q ss_pred HHHHHHhcCCceEEEcccHH
Q psy17228 24 KIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 24 ~i~~i~~~~~~pilVGGTgl 43 (99)
.+..+++.|.+||+.|+.|+
T Consensus 133 ~i~~lL~~g~ipVi~g~~g~ 152 (270)
T 2ogx_B 133 AVPLSLAEVNAVVFSGMPPY 152 (270)
T ss_dssp HHHHHCTTCCEEEEECSCTT
T ss_pred HHHHHHhCCCEEEEeCCccc
Confidence 37788899999999998553
No 137
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.38 E-value=26 Score=24.87 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=14.4
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
.++..+|+||||+==.+|+.-
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~ 24 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVE 24 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHH
T ss_pred CCcEEEEecCCcHHHHHHHHH
Confidence 456788999999754555443
No 138
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=24.06 E-value=22 Score=25.36 Aligned_cols=17 Identities=18% Similarity=0.149 Sum_probs=11.8
Q ss_pred CCceEEEcccHHHHHHH
Q psy17228 32 NKVPIIVGGTNYYIESL 48 (99)
Q Consensus 32 ~~~pilVGGTglYi~al 48 (99)
++..+|+||||+==.+|
T Consensus 14 ~~~vlVtGa~G~iG~~l 30 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKL 30 (342)
T ss_dssp CEEEEEETTTSHHHHHH
T ss_pred CCEEEEECCCcHHHHHH
Confidence 55678889999754443
No 139
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=24.04 E-value=78 Score=23.37 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHh-------cCCceEEEcccH
Q psy17228 18 IKLTKTKIDDILQ-------RNKVPIIVGGTN 42 (99)
Q Consensus 18 ~~~a~~~i~~i~~-------~~~~pilVGGTg 42 (99)
++++...|++.++ ..+++|+.|||-
T Consensus 182 a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV 213 (252)
T 2btm_A 182 ANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSV 213 (252)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEEEEESSC
T ss_pred HHHHHHHHHHHHHHhcCccccCceeEEEcCCC
Confidence 3455555555433 358999999984
No 140
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=23.93 E-value=85 Score=23.11 Aligned_cols=25 Identities=24% Similarity=0.402 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHh-------cCCceEEEcccH
Q psy17228 18 IKLTKTKIDDILQ-------RNKVPIIVGGTN 42 (99)
Q Consensus 18 ~~~a~~~i~~i~~-------~~~~pilVGGTg 42 (99)
++++...|++.++ ..+++|+.|||-
T Consensus 182 aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV 213 (250)
T 1yya_A 182 AEAMHQAIRKALSERYGEAFASRVRILYGGSV 213 (250)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHHHHHHhcCccccCceeEEEcCCC
Confidence 3444555555433 258999999984
No 141
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=23.93 E-value=26 Score=25.19 Aligned_cols=18 Identities=33% Similarity=0.145 Sum_probs=12.3
Q ss_pred CceEEEcccHHHHHHHHh
Q psy17228 33 KVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 33 ~~pilVGGTglYi~all~ 50 (99)
+..+|+||||+==.+|+.
T Consensus 2 ~~vlVtGatG~iG~~l~~ 19 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAE 19 (372)
T ss_dssp CEEEEETTTSHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHH
Confidence 457889999985444443
No 142
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=23.84 E-value=48 Score=24.10 Aligned_cols=30 Identities=7% Similarity=-0.013 Sum_probs=19.4
Q ss_pred HHHHHHHHhcC-CceEEEcc---cHHHHHHHHhc
Q psy17228 22 KTKIDDILQRN-KVPIIVGG---TNYYIESLLWT 51 (99)
Q Consensus 22 ~~~i~~i~~~~-~~pilVGG---TglYi~all~g 51 (99)
.+.++.+.+.- .+||+||| |.=-++.++.|
T Consensus 168 ~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~~g 201 (228)
T 3vzx_A 168 IEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEH 201 (228)
T ss_dssp HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhC
Confidence 45666776666 79999998 44444445444
No 143
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=23.57 E-value=42 Score=26.47 Aligned_cols=22 Identities=18% Similarity=0.412 Sum_probs=16.6
Q ss_pred HHHHHHHHhcCCceEEEcccHH
Q psy17228 22 KTKIDDILQRNKVPIIVGGTNY 43 (99)
Q Consensus 22 ~~~i~~i~~~~~~pilVGGTgl 43 (99)
.+.|+.+++.|.+||+.|+.|.
T Consensus 175 ~~~i~~ll~~g~ipVv~G~~g~ 196 (473)
T 3c1m_A 175 KERLLPLLKEGIIPVVTGFIGT 196 (473)
T ss_dssp HHHHHHHHHTTCEEEEESSEEE
T ss_pred HHHHHHHHhCCcEEEEeCCccc
Confidence 4556667789999999986653
No 144
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=23.51 E-value=27 Score=24.60 Aligned_cols=19 Identities=16% Similarity=0.233 Sum_probs=13.1
Q ss_pred CceEEEcccHHHHHHHHhc
Q psy17228 33 KVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 33 ~~pilVGGTglYi~all~g 51 (99)
+..+|+||||+==.+|+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~ 21 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVES 21 (311)
T ss_dssp CEEEEETTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHH
Confidence 4568889999865555544
No 145
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=23.51 E-value=1.1e+02 Score=20.93 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcCCceEEEc---ccHHHHHHHHhcccCC
Q psy17228 19 KLTKTKIDDILQRNKVPIIVG---GTNYYIESLLWTILLD 55 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVG---GTglYi~all~g~~~~ 55 (99)
+.|.++.++. +|+.|++|| |.-.+..-|+.-+.+|
T Consensus 25 rlA~eI~e~~--~~~~~vlvgIl~Gg~~fa~~L~~~l~~~ 62 (181)
T 3acd_A 25 ELGGEIARDY--QGKTPHLICVLNGAFIFMADLVRAIPLP 62 (181)
T ss_dssp HHHHHHHHHT--TTCCCEEEEEETTTHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHh--CCCCcEEEEEecCcHHHHHHHHHhcCCC
Confidence 4555555443 467888887 8777788888776653
No 146
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.47 E-value=31 Score=22.94 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=12.1
Q ss_pred CceEEEcccHHHHHHHHh
Q psy17228 33 KVPIIVGGTNYYIESLLW 50 (99)
Q Consensus 33 ~~pilVGGTglYi~all~ 50 (99)
+..+|+||||+==.+|+.
T Consensus 5 ~~ilItGatG~iG~~l~~ 22 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLN 22 (227)
T ss_dssp CEEEEETCCHHHHHHHHH
T ss_pred CEEEEEcCCchHHHHHHH
Confidence 457888999985444444
No 147
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=23.36 E-value=27 Score=24.61 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=13.8
Q ss_pred ceEEEcccHHHHHHHHhcc
Q psy17228 34 VPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 34 ~pilVGGTglYi~all~g~ 52 (99)
..+|+||||+==.+|+.-+
T Consensus 3 ~vlVTGatG~iG~~l~~~L 21 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKL 21 (313)
T ss_dssp CEEEETTTSHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHH
Confidence 4688899998766666554
No 148
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.27 E-value=45 Score=24.57 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhcCCceEEEcc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGG 40 (99)
+..+.++.+.+..++||+|||
T Consensus 193 ~~~~~v~~vr~~~~~pv~vGf 213 (267)
T 3vnd_A 193 PIENILTQLAEFNAPPPLLGF 213 (267)
T ss_dssp CHHHHHHHHHTTTCCCEEECS
T ss_pred HHHHHHHHHHHhcCCCEEEEC
Confidence 456778888777789999975
No 149
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=23.24 E-value=38 Score=25.85 Aligned_cols=18 Identities=33% Similarity=0.309 Sum_probs=14.1
Q ss_pred ceEEEcccHHHHHHHHhccc
Q psy17228 34 VPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 34 ~pilVGGTglYi~all~g~~ 53 (99)
+.+|.||||+. .++.|+.
T Consensus 1 iv~lgGGtGl~--~ll~gLk 18 (311)
T 3c3d_A 1 MIIFSGGTGTP--KLLDGLK 18 (311)
T ss_dssp CEEEECTTHHH--HHHHHHT
T ss_pred CEEEeCcccHH--HHHHHHH
Confidence 35788999987 7777764
No 150
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=23.15 E-value=56 Score=23.94 Aligned_cols=29 Identities=10% Similarity=0.234 Sum_probs=18.8
Q ss_pred HHHHHHHHhcC-CceEEEcc---cHHHHHHHHh
Q psy17228 22 KTKIDDILQRN-KVPIIVGG---TNYYIESLLW 50 (99)
Q Consensus 22 ~~~i~~i~~~~-~~pilVGG---TglYi~all~ 50 (99)
.+.++.+.+.. .+|++||| |.=-.+.+..
T Consensus 174 ~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~ 206 (235)
T 3w01_A 174 VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA 206 (235)
T ss_dssp HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc
Confidence 45667777666 89999987 3444444444
No 151
>2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon metabolism, lipophilic antifolates, NADP, oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium avium} PDB: 2w3v_A*
Probab=23.09 E-value=49 Score=22.28 Aligned_cols=28 Identities=18% Similarity=0.451 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHH
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESL 48 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~al 48 (99)
+..+++ ++.+.++-..|+||..+|=.+|
T Consensus 85 ~~~~~l-~l~~~~~~i~ViGG~~l~~~~l 112 (167)
T 2w3w_A 85 SLEAAL-AYAGSDPAPWVIGGAQIYLLAL 112 (167)
T ss_dssp SHHHHH-HHTTTCSSCEEEECHHHHHHHG
T ss_pred CHHHHH-HhhcCCCeEEEEchHHHHHHHH
Confidence 444555 3444567778889999996654
No 152
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=23.05 E-value=43 Score=19.35 Aligned_cols=26 Identities=8% Similarity=0.055 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYY 44 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglY 44 (99)
..|....+.+...|-.+.|+.|.++|
T Consensus 21 ~~A~~~~~~L~~~g~~~~i~~~~~~y 46 (79)
T 1x60_A 21 ANADSLASNAEAKGFDSIVLLKDGLY 46 (79)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred HHHHHHHHHHHhCCCCeEEecCCcEE
Confidence 57888888888888777888766555
No 153
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=22.80 E-value=96 Score=19.66 Aligned_cols=33 Identities=15% Similarity=-0.024 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHHHHHhc
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~all~g 51 (99)
..+.+.++.+.++|++-|+.+++..+++.++..
T Consensus 89 ~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~ 121 (200)
T 3cnh_A 89 PEVLALARDLGQRYRMYSLNNEGRDLNEYRIRT 121 (200)
T ss_dssp HHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHh
Confidence 467888898888886666678888888888764
No 154
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=22.73 E-value=79 Score=23.86 Aligned_cols=24 Identities=8% Similarity=0.058 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhcC-CceEEEcccH
Q psy17228 19 KLTKTKIDDILQRN-KVPIIVGGTN 42 (99)
Q Consensus 19 ~~a~~~i~~i~~~~-~~pilVGGTg 42 (99)
+.+.++++.|.+.+ +.||+|||.+
T Consensus 159 ~~~~~~i~~IR~~dp~~~Iiv~g~~ 183 (345)
T 3jug_A 159 DGYIDVIPKLRDAGLTHTLMVDAAG 183 (345)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEECBT
T ss_pred HHHHHHHHHHHhhCCCCEEEEeCCC
Confidence 45566777777665 6799999854
No 155
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=22.64 E-value=1.1e+02 Score=22.75 Aligned_cols=20 Identities=30% Similarity=0.340 Sum_probs=16.3
Q ss_pred CceEEEcccHH--HHHHHHhcc
Q psy17228 33 KVPIIVGGTNY--YIESLLWTI 52 (99)
Q Consensus 33 ~~pilVGGTgl--Yi~all~g~ 52 (99)
.-.+||||++. |++.++...
T Consensus 346 ~~V~LvGG~s~~p~v~~~l~~~ 367 (409)
T 4gni_A 346 DEVIMSGGTSNTPRIAANFRYI 367 (409)
T ss_dssp CEEEEESGGGGCHHHHHHHHHH
T ss_pred CEEEEECCccccHHHHHHHHHH
Confidence 45789999998 888888774
No 156
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.59 E-value=56 Score=23.94 Aligned_cols=19 Identities=32% Similarity=0.468 Sum_probs=15.3
Q ss_pred HHHHHHHHhcCCceEEEcc
Q psy17228 22 KTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 22 ~~~i~~i~~~~~~pilVGG 40 (99)
.+.++.+.+...+||+|||
T Consensus 191 ~~~v~~vr~~~~~Pv~vGf 209 (271)
T 1ujp_A 191 KDLVRRIKARTALPVAVGF 209 (271)
T ss_dssp HHHHHHHHTTCCSCEEEES
T ss_pred HHHHHHHHhhcCCCEEEEc
Confidence 4677788777789999987
No 157
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=22.52 E-value=30 Score=25.52 Aligned_cols=12 Identities=25% Similarity=0.512 Sum_probs=9.7
Q ss_pred CCceEEEcccHH
Q psy17228 32 NKVPIIVGGTNY 43 (99)
Q Consensus 32 ~~~pilVGGTgl 43 (99)
.+++|+-|||--
T Consensus 198 ~~vrIlYGGSV~ 209 (244)
T 2v5b_A 198 AQLRILYGGSVT 209 (244)
T ss_dssp HHCEEEECSCCC
T ss_pred CcccEEEcCCCC
Confidence 468999999854
No 158
>2bl9_A Dihydrofolate reductase-thymidylate synthase; plamodium vivax, pyrimethamine, malaria, drug resistance, oxidoreductase; HET: NDP CP6; 1.9A {Plasmodium vivax} PDB: 2blb_A* 2blc_A* 2bla_A*
Probab=22.45 E-value=1e+02 Score=22.33 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhc-CCceEEEcccHHHHHHHHhcc
Q psy17228 20 LTKTKIDDILQR-NKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 20 ~a~~~i~~i~~~-~~~pilVGGTglYi~all~g~ 52 (99)
...++++.+.+. ++-..|+||..+|=.+|-.|+
T Consensus 154 sl~eal~~lk~~~~~~I~ViGGa~Iy~~~L~~gl 187 (238)
T 2bl9_A 154 SIDDLLLLLKKLKYYKCFIIGGAQVYRECLSRNL 187 (238)
T ss_dssp CHHHHHHHHHTCCCSCEEEEECHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCCEEEECcHHHHHHHhcccC
Confidence 455566666554 466777799999988886553
No 159
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=22.19 E-value=54 Score=23.16 Aligned_cols=17 Identities=29% Similarity=0.476 Sum_probs=14.3
Q ss_pred HHHHhcCCceEEEcccH
Q psy17228 26 DDILQRNKVPIIVGGTN 42 (99)
Q Consensus 26 ~~i~~~~~~pilVGGTg 42 (99)
..+++.|.+||+.||+|
T Consensus 122 ~~ll~~g~ipVi~~~~g 138 (247)
T 2a1f_A 122 IKMLREKRVVIFSAGTG 138 (247)
T ss_dssp HHHHHTTCEEEEESTTS
T ss_pred HHHHhCCCEEEEeCCcC
Confidence 56778999999998765
No 160
>3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A*
Probab=22.07 E-value=52 Score=22.87 Aligned_cols=28 Identities=21% Similarity=0.424 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHH
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESL 48 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~al 48 (99)
+..++++.+.+ ++-..|+||..+|=++|
T Consensus 79 sl~eal~~l~~-~~~i~viGG~~iy~~~l 106 (178)
T 3tq8_A 79 SLDDALSALTK-EPEVIIIGGARIFKEAL 106 (178)
T ss_dssp SHHHHHHHTTT-CSEEEEEECHHHHHHHG
T ss_pred CHHHHHHHhhC-CCCEEEECCHHHHHHHH
Confidence 44555655433 56778889999997665
No 161
>1ucr_A Protein DSVD; dissimilatory sulfite reductase D, DNA binding motif, sulfate-reducing bacteria, winged-helix motif, unknown function; 1.20A {Desulfovibrio vulgaris} SCOP: a.4.5.45 PDB: 1wq2_A
Probab=22.01 E-value=40 Score=21.06 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhcCCceEEEcc-cHHH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGG-TNYY 44 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGG-TglY 44 (99)
+++..+++++...|++-...-| |-||
T Consensus 37 r~vKK~~~~LV~Eg~leywSSGSTTmy 63 (78)
T 1ucr_A 37 REVKKILTALVNDEVLEYWSSGSTTMY 63 (78)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhcCceEEEecCCeEEE
Confidence 6777899999999999999977 5554
No 162
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=21.96 E-value=23 Score=24.01 Aligned_cols=21 Identities=10% Similarity=0.245 Sum_probs=14.5
Q ss_pred CCceEEEcccHHHHHHHHhcc
Q psy17228 32 NKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 32 ~~~pilVGGTglYi~all~g~ 52 (99)
|+..+|+||||.-=.++..-+
T Consensus 1 ~k~vlVTGasggiG~~la~~l 21 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSL 21 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHH
Confidence 467789999987655555543
No 163
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=21.75 E-value=31 Score=24.05 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=11.5
Q ss_pred CCceEEEcccHHHHHHHH
Q psy17228 32 NKVPIIVGGTNYYIESLL 49 (99)
Q Consensus 32 ~~~pilVGGTglYi~all 49 (99)
++..+|+||||+==.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~ 19 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIV 19 (307)
T ss_dssp CCCEEEESTTSTTHHHHH
T ss_pred CcEEEEECCCchHHHHHH
Confidence 355788899986433433
No 164
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=21.57 E-value=33 Score=23.51 Aligned_cols=21 Identities=19% Similarity=0.150 Sum_probs=15.3
Q ss_pred cCCceEEEcccHHHHHHHHhc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWT 51 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g 51 (99)
+++..+|+||||.-=.++..-
T Consensus 11 ~~k~vlVTGasggiG~~~a~~ 31 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAER 31 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHH
Confidence 578899999998755555543
No 165
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=21.57 E-value=95 Score=22.22 Aligned_cols=26 Identities=27% Similarity=0.457 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhcC--CceEEEcccHH
Q psy17228 18 IKLTKTKIDDILQRN--KVPIIVGGTNY 43 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~--~~pilVGGTgl 43 (99)
...+.++++.|.+.+ +.+|+|||.+.
T Consensus 143 ~~~~~~~~~~IR~~~~~~~~I~v~g~~~ 170 (305)
T 1h1n_A 143 LNLNQAAIDGIRSAGATSQYIFVEGNSW 170 (305)
T ss_dssp HHHHHHHHHHHHHTTCCSSCEEEECTGG
T ss_pred HHHHHHHHHHHHhcCCCccEEEEccccc
Confidence 356677777777654 57999998664
No 166
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=21.56 E-value=63 Score=22.85 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhcCCceEEEcc
Q psy17228 20 LTKTKIDDILQRNKVPIIVGG 40 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGG 40 (99)
...+.+..+.+..++||+|||
T Consensus 188 ~~~~~i~~v~~~~~~pI~vgG 208 (262)
T 1rd5_A 188 RVESLIQEVKKVTNKPVAVGF 208 (262)
T ss_dssp HHHHHHHHHHHHCSSCEEEES
T ss_pred hHHHHHHHHHhhcCCeEEEEC
Confidence 344566666666689999966
No 167
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=21.53 E-value=52 Score=24.67 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=21.8
Q ss_pred HHHHHHHhcCCceEEEcccHH----HHHHHHh
Q psy17228 23 TKIDDILQRNKVPIIVGGTNY----YIESLLW 50 (99)
Q Consensus 23 ~~i~~i~~~~~~pilVGGTgl----Yi~all~ 50 (99)
+.++-....|.+-+|||+||- -+++|+.
T Consensus 166 ~~l~~~i~~G~~i~ivG~sGsGKSTll~~l~~ 197 (361)
T 2gza_A 166 SFLRRAVQLERVIVVAGETGSGKTTLMKALMQ 197 (361)
T ss_dssp HHHHHHHHTTCCEEEEESSSSCHHHHHHHHHT
T ss_pred HHHHHHHhcCCEEEEECCCCCCHHHHHHHHHh
Confidence 666777789999999998885 5666653
No 168
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=21.32 E-value=73 Score=24.43 Aligned_cols=12 Identities=33% Similarity=0.747 Sum_probs=9.9
Q ss_pred cCCceEEEcccH
Q psy17228 31 RNKVPIIVGGTN 42 (99)
Q Consensus 31 ~~~~pilVGGTg 42 (99)
.+.++|+.|||-
T Consensus 258 a~~vrILYGGSV 269 (310)
T 3s6d_A 258 KGEVRILYGGSA 269 (310)
T ss_dssp SSCEEEEEEEEE
T ss_pred cCceeEEEcCcc
Confidence 368999999984
No 169
>3os6_A Isochorismate synthase DHBC; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE 15P; 2.40A {Bacillus anthracis}
Probab=21.30 E-value=51 Score=25.90 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhcC-CceEEEcccHHH
Q psy17228 17 TIKLTKTKIDDILQRN-KVPIIVGGTNYY 44 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~-~~pilVGGTglY 44 (99)
+.+++....+.....| ..|++||+-.|=
T Consensus 50 ~~~~~~~~~~~a~~~g~~~p~~vGa~pFd 78 (399)
T 3os6_A 50 FPELVQAVLRNAKQAGNPNPIVVGALPFD 78 (399)
T ss_dssp HHHHHHHHHHHHHHHSCSSCEEEEEECSS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeccC
Confidence 5567777777777777 889999986654
No 170
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=21.08 E-value=86 Score=27.04 Aligned_cols=27 Identities=26% Similarity=0.255 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhcC---CceEEEcccHH
Q psy17228 17 TIKLTKTKIDDILQRN---KVPIIVGGTNY 43 (99)
Q Consensus 17 ~~~~a~~~i~~i~~~~---~~pilVGGTgl 43 (99)
......+.++.+.++| ++||+|||.-+
T Consensus 673 hL~~MkevIelLrE~GlrDkIkVIVGGa~~ 702 (763)
T 3kp1_A 673 HYKNMKRIHELAVEKGIRDKIMIGCGGTQV 702 (763)
T ss_dssp HHHHHHHHHHHHHHTTCTTTSEEEEECTTC
T ss_pred hHHHHHHHHHHHHhcCCCCCCEEEEECCCC
Confidence 3455667777777776 48999999653
No 171
>3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} SCOP: c.71.1.0 PDB: 3ia5_A 2zza_A*
Probab=21.04 E-value=60 Score=21.98 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhcCCceEEEcccHHHHHHH
Q psy17228 20 LTKTKIDDILQRNKVPIIVGGTNYYIESL 48 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVGGTglYi~al 48 (99)
...++++.+.+ ++-..|+||..+|=.+|
T Consensus 79 s~~~al~~l~~-~~~i~viGG~~iy~~~l 106 (162)
T 3ia4_A 79 TLEDAVVAAGD-VEELMIIGGATIYNQCL 106 (162)
T ss_dssp SHHHHHHHHTT-CSEEEECCCHHHHHHHG
T ss_pred CHHHHHHHhhC-CCCEEEECCHHHHHHHH
Confidence 44555555433 56678889999996655
No 172
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.96 E-value=64 Score=24.01 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=20.7
Q ss_pred HHHHHHHHHHh-cCCceEEEc--ccHHHHHHHHhc
Q psy17228 20 LTKTKIDDILQ-RNKVPIIVG--GTNYYIESLLWT 51 (99)
Q Consensus 20 ~a~~~i~~i~~-~~~~pilVG--GTglYi~all~g 51 (99)
++.+.+..+++ =|+.|++|| |.||..+-++..
T Consensus 167 e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a 201 (319)
T 2dpo_A 167 ATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYA 201 (319)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHH
Confidence 33334444443 389999997 789877766654
No 173
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=20.75 E-value=35 Score=23.63 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=16.1
Q ss_pred cCCceEEEcccHHHHHHHHhcc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~ 52 (99)
.|+..+|+||||.-=.++...+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l 27 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGF 27 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHH
Confidence 4788999999987655655543
No 174
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=20.68 E-value=62 Score=23.07 Aligned_cols=35 Identities=29% Similarity=0.302 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCC--ceEEEcccHHHHHHHHhccc
Q psy17228 19 KLTKTKIDDILQRNK--VPIIVGGTNYYIESLLWTIL 53 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~--~pilVGGTglYi~all~g~~ 53 (99)
.|...++..+.++|. .-+++||||-=++..+..+.
T Consensus 78 TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~ 114 (222)
T 3mel_A 78 TDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLW 114 (222)
T ss_dssp CHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHH
Confidence 366677777777775 57888999999998887764
No 175
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=20.51 E-value=86 Score=21.60 Aligned_cols=30 Identities=23% Similarity=0.243 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCCceEEE-cccHHHHHHH
Q psy17228 18 IKLTKTKIDDILQRNKVPIIV-GGTNYYIESL 48 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~~~pilV-GGTglYi~al 48 (99)
..++.+...++ ..|-=.||. |||+-||+.-
T Consensus 38 l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~ 68 (196)
T 2q5c_A 38 LTRASKIAFGL-QDEVDAIISRGATSDYIKKS 68 (196)
T ss_dssp HHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCeEEEECChHHHHHHHh
Confidence 35677777777 656545555 9999999954
No 176
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=20.47 E-value=79 Score=26.93 Aligned_cols=23 Identities=22% Similarity=0.369 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhcC--CceEEEcc
Q psy17228 18 IKLTKTKIDDILQRN--KVPIIVGG 40 (99)
Q Consensus 18 ~~~a~~~i~~i~~~~--~~pilVGG 40 (99)
...+.+.++.+.+.| .++|+|||
T Consensus 661 ~~~~~~vi~~L~~~G~~~i~VivGG 685 (727)
T 1req_A 661 LTLVPALRKELDKLGRPDILITVGG 685 (727)
T ss_dssp HHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcC
Confidence 345677777787777 58999999
No 177
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=20.34 E-value=35 Score=26.28 Aligned_cols=22 Identities=14% Similarity=0.317 Sum_probs=16.2
Q ss_pred cCCceEEEcccHHHHHHHHhcc
Q psy17228 31 RNKVPIIVGGTNYYIESLLWTI 52 (99)
Q Consensus 31 ~~~~pilVGGTglYi~all~g~ 52 (99)
+++..+|+||||+==.+|+..+
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~L 93 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLEL 93 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHH
Confidence 4678899999998655555543
No 178
>2xzm_8 RPS25E,; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_8
Probab=20.04 E-value=33 Score=23.72 Aligned_cols=28 Identities=14% Similarity=0.262 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcCCceEEEcccHHHHH
Q psy17228 19 KLTKTKIDDILQRNKVPIIVGGTNYYIE 46 (99)
Q Consensus 19 ~~a~~~i~~i~~~~~~pilVGGTglYi~ 46 (99)
..|+.+|+++.++|.+-.|++++...|.
T Consensus 78 SLARkaLreL~~kGlIk~V~kh~~q~IY 105 (143)
T 2xzm_8 78 SLARQLMRTMADRKLVEKVAKNGNQWVY 105 (143)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCeEEE
Confidence 6899999999999999999998876543
No 179
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=20.03 E-value=39 Score=24.61 Aligned_cols=20 Identities=5% Similarity=-0.006 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhcCCceEEEc
Q psy17228 20 LTKTKIDDILQRNKVPIIVG 39 (99)
Q Consensus 20 ~a~~~i~~i~~~~~~pilVG 39 (99)
...+.|..+++.|.+||+.|
T Consensus 132 ~~~~~i~~lL~~g~IpVi~~ 151 (276)
T 2ogx_A 132 TVADQLAIHLSATRAVVGSA 151 (276)
T ss_dssp HHHHHHHHHHHHSSEEEEES
T ss_pred ChHHHHHHHHhCCCEEEEcC
Confidence 35667888999999999998
Done!