Your job contains 1 sequence.
>psy1723
MFCLRLTVTTTLEFHVGHESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSI
FCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEGVGSIPAERKLKLNISTSPY
YYFSLSLPPSLLYLARIGGASLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMN
TIMLEPVTLPSSRQTLDKSTIARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQC
RQKSLA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1723
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028467 - symbol:CG11070 species:7227 "Drosophila ... 525 1.4e-49 1
UNIPROTKB|B7Z7P0 - symbol:UBE4A "cDNA FLJ51394, highly si... 290 5.9e-44 2
UNIPROTKB|F1M8W6 - symbol:Ube4a "Ubiquitin conjugation fa... 289 1.1e-42 2
UNIPROTKB|Q14139 - symbol:UBE4A "Ubiquitin conjugation fa... 290 1.3e-42 2
UNIPROTKB|F1M9N5 - symbol:Ube4a "Ubiquitin conjugation fa... 289 1.3e-42 2
UNIPROTKB|E2RPU3 - symbol:UBE4A "Uncharacterized protein"... 289 1.6e-42 2
UNIPROTKB|A5PKG6 - symbol:UBE4A "Ubiquitin conjugation fa... 289 1.6e-42 2
UNIPROTKB|F1SAK7 - symbol:UBE4A "Uncharacterized protein"... 289 1.6e-42 2
RGD|1303173 - symbol:Ube4a "ubiquitination factor E4A" sp... 285 3.4e-42 2
UNIPROTKB|E1C6M5 - symbol:CBL "Uncharacterized protein" s... 279 2.4e-41 2
UNIPROTKB|F1NIK2 - symbol:CBL "Uncharacterized protein" s... 279 2.4e-41 2
ZFIN|ZDB-GENE-070410-21 - symbol:ube4a "ubiquitination fa... 288 6.3e-41 2
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga... 216 7.6e-27 2
DICTYBASE|DDB_G0292264 - symbol:nosA "U box domain-contai... 226 1.3e-25 2
CGD|CAL0003403 - symbol:orf19.5965 species:5476 "Candida ... 229 2.2e-24 2
TAIR|locus:2180862 - symbol:AT5G15400 species:3702 "Arabi... 278 5.1e-23 1
ASPGD|ASPL0000072757 - symbol:AN10556 species:162425 "Eme... 213 6.2e-22 2
FB|FBgn0032467 - symbol:CG9934 species:7227 "Drosophila m... 265 1.6e-21 1
SGD|S000002349 - symbol:UFD2 "Ubiquitin chain assembly fa... 242 3.2e-19 1
UNIPROTKB|I3LQG8 - symbol:LOC100737278 "Uncharacterized p... 229 4.0e-19 1
ZFIN|ZDB-GENE-020205-1 - symbol:ube4b "ubiquitination fac... 241 6.6e-19 1
UNIPROTKB|O95155 - symbol:UBE4B "Ubiquitin conjugation fa... 234 3.5e-18 1
RGD|1304738 - symbol:Ube4b "ubiquitination factor E4B" sp... 233 3.9e-18 1
UNIPROTKB|A6QNS2 - symbol:UBE4B "UBE4B protein" species:9... 229 1.3e-17 1
UNIPROTKB|J9P2H4 - symbol:UBE4B "Uncharacterized protein"... 228 1.3e-17 1
UNIPROTKB|F1NGY1 - symbol:UBE4B "Uncharacterized protein"... 228 1.3e-17 1
UNIPROTKB|F1P7I0 - symbol:UBE4B "Uncharacterized protein"... 228 1.5e-17 1
UNIPROTKB|J9P9M3 - symbol:UBE4B "Uncharacterized protein"... 228 1.6e-17 1
WB|WBGene00006734 - symbol:ufd-2 species:6239 "Caenorhabd... 189 8.2e-17 2
UNIPROTKB|Q95QB5 - symbol:ufd-2 "Protein UFD-2, isoform b... 189 8.2e-17 2
UNIPROTKB|F1M8D6 - symbol:Ube4b "Protein Ube4b" species:1... 215 3.2e-16 1
DICTYBASE|DDB_G0282185 - symbol:DDB_G0282185 "U box domai... 120 0.00018 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 101 0.00081 1
>FB|FBgn0028467 [details] [associations]
symbol:CG11070 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK EMBL:AF181657
RefSeq:NP_609060.1 UniGene:Dm.331 SMR:Q9U4F8
EnsemblMetazoa:FBtr0079297 GeneID:33932 KEGG:dme:Dmel_CG11070
UCSC:CG11070-RA FlyBase:FBgn0028467 InParanoid:Q9U4F8
OrthoDB:EOG495X6S GenomeRNAi:33932 NextBio:785986 Uniprot:Q9U4F8
Length = 993
Score = 525 (189.9 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 107/224 (47%), Positives = 149/224 (66%)
Query: 29 LQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRN 88
LQH+GM+ARFDNI+G +TI+ L+ LTS+I+SIFCH++MVDR+AAMLNYFL +LVGPK
Sbjct: 764 LQHLGMLARFDNIIGRDTINLLKLLTSKIKSIFCHNSMVDRMAAMLNYFLLNLVGPKKER 823
Query: 89 FKTSRRSPGKQEGVGSIPAERKLKLNISTXXX----------XXXXXXXXXXXXXXARIG 138
FK + + + ++ + +N+S+ RIG
Sbjct: 824 FKVKDKKEFEFDPAQTVIEISHIYINLSSDESFCLAVSQDGRSYSEQLFSYAENILIRIG 883
Query: 139 GASLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDK 198
G LI D+ AV V ++GAQ + ++ LLA AP+EYLDPI++T+M +PV LPSS+ T+D+
Sbjct: 884 GGQLIGDMSEFAVKVARMGAQYKEEQELLADAPEEYLDPIISTLMTDPVVLPSSKVTVDR 943
Query: 199 STIARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQ 242
STIARHLLSDQTDPFNR PLTM++V N L+ +I+ WI+ R+
Sbjct: 944 STIARHLLSDQTDPFNREPLTMDKVKSNEALKQEIESWIQGKRE 987
>UNIPROTKB|B7Z7P0 [details] [associations]
symbol:UBE4A "cDNA FLJ51394, highly similar to Ubiquitin
conjugation factor E4 A" species:9606 "Homo sapiens" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 GO:GO:0005737
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209
GO:GO:0000151 GO:GO:0034450 EMBL:AP001582 HOGENOM:HOG000007049
OrthoDB:EOG4CRKZ8 UniGene:Hs.602967 UniGene:Hs.75275
HGNC:HGNC:12499 ChiTaRS:UBE4A EMBL:AP001267 EMBL:AK302328
IPI:IPI01012808 SMR:B7Z7P0 STRING:B7Z7P0 Ensembl:ENST00000545354
Uniprot:B7Z7P0
Length = 538
Score = 290 (107.1 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 431 NMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRST 490
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 491 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 533
Score = 202 (76.2 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 299 EARREKEAG-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFL 357
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 358 QHLVGPKMGALK 369
>UNIPROTKB|F1M8W6 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 GO:GO:0034450 IPI:IPI00476304
Ensembl:ENSRNOT00000021060 ArrayExpress:F1M8W6 Uniprot:F1M8W6
Length = 1030
Score = 289 (106.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 923 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRST 982
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 983 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1025
Score = 203 (76.5 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 791 EARREKEAG-LQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFL 849
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 850 QHLVGPKMGALK 861
>UNIPROTKB|Q14139 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005737 Reactome:REACT_6900 EMBL:CH471065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 CTD:9354 HOGENOM:HOG000007049
HOVERGEN:HBG059871 KO:K10596 OMA:DRDAGEK EMBL:D50916 EMBL:EF445042
EMBL:BC052643 EMBL:BC062695 EMBL:BC111417 EMBL:BC112367
IPI:IPI00028957 IPI:IPI00556075 RefSeq:NP_001191006.1
RefSeq:NP_004779.2 UniGene:Hs.602967 UniGene:Hs.75275 PDB:1WGM
PDBsum:1WGM ProteinModelPortal:Q14139 SMR:Q14139 IntAct:Q14139
STRING:Q14139 PhosphoSite:Q14139 DMDM:71164791 PaxDb:Q14139
PRIDE:Q14139 Ensembl:ENST00000252108 Ensembl:ENST00000431736
GeneID:9354 KEGG:hsa:9354 UCSC:uc001psv.3 UCSC:uc001psw.3
GeneCards:GC11P118264 HGNC:HGNC:12499 MIM:603753 neXtProt:NX_Q14139
PharmGKB:PA37147 InParanoid:Q14139 ChiTaRS:UBE4A
EvolutionaryTrace:Q14139 GenomeRNAi:9354 NextBio:35029
PMAP-CutDB:B0YJB6 ArrayExpress:Q14139 Bgee:Q14139 CleanEx:HS_UBE4A
Genevestigator:Q14139 GermOnline:ENSG00000110344 Uniprot:Q14139
Length = 1066
Score = 290 (107.1 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 959 NMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 202 (76.2 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>UNIPROTKB|F1M9N5 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00369411
PRIDE:F1M9N5 Ensembl:ENSRNOT00000021321 ArrayExpress:F1M9N5
Uniprot:F1M9N5
Length = 1066
Score = 289 (106.8 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 959 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 203 (76.5 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>UNIPROTKB|E2RPU3 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450 CTD:9354
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK
EMBL:AAEX03003449 RefSeq:XP_850081.1 Ensembl:ENSCAFT00000038039
GeneID:479418 KEGG:cfa:479418 NextBio:20854604 Uniprot:E2RPU3
Length = 1066
Score = 289 (106.8 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 959 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 202 (76.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>UNIPROTKB|A5PKG6 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9913 "Bos taurus" [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 EMBL:BC142480 IPI:IPI00854465 RefSeq:NP_001092469.1
UniGene:Bt.103454 ProteinModelPortal:A5PKG6 SMR:A5PKG6
STRING:A5PKG6 PRIDE:A5PKG6 Ensembl:ENSBTAT00000026289 GeneID:517544
KEGG:bta:517544 CTD:9354 GeneTree:ENSGT00390000009300
HOGENOM:HOG000007049 HOVERGEN:HBG059871 InParanoid:A5PKG6 KO:K10596
OMA:DRDAGEK OrthoDB:EOG4CRKZ8 NextBio:20872466 Uniprot:A5PKG6
Length = 1067
Score = 289 (106.8 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 959 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 202 (76.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>UNIPROTKB|F1SAK7 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:CU914235
Ensembl:ENSSSCT00000016461 Uniprot:F1SAK7
Length = 1067
Score = 289 (106.8 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 56/103 (54%), Positives = 77/103 (74%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+ST
Sbjct: 959 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 202 (76.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>RGD|1303173 [details] [associations]
symbol:Ube4a "ubiquitination factor E4A" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA;ISO] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 CTD:9354 HOVERGEN:HBG059871 KO:K10596
OrthoDB:EOG4CRKZ8 EMBL:BC061761 IPI:IPI00369411 RefSeq:NP_997493.1
UniGene:Rn.102204 ProteinModelPortal:Q6P7A2 SMR:Q6P7A2
STRING:Q6P7A2 PRIDE:Q6P7A2 GeneID:315608 KEGG:rno:315608
UCSC:RGD:1303173 InParanoid:Q6P7A2 NextBio:669506
ArrayExpress:Q6P7A2 Genevestigator:Q6P7A2
GermOnline:ENSRNOG00000026833 Uniprot:Q6P7A2
Length = 1066
Score = 285 (105.4 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 56/103 (54%), Positives = 76/103 (73%)
Query: 141 SLIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKST 200
++I +A ++ L Q +E A A DE+LDPIM+T+M +PV LPSSR T+D ST
Sbjct: 959 NMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDGST 1018
Query: 201 IARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
IARHLLSDQTDPFNRSPLTM+Q+ PNT+L+ +IQ W+ + +Q+
Sbjct: 1019 IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1061
Score = 203 (76.5 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 19 ESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFL 78
E+ R+ ++G LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +MLNYFL
Sbjct: 827 EARREKEAG-LQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFL 885
Query: 79 FHLVGPKMRNFK 90
HLVGPKM K
Sbjct: 886 QHLVGPKMGALK 897
>UNIPROTKB|E1C6M5 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:AADN02041816
EMBL:AADN02041817 EMBL:AADN02041818 EMBL:AADN02041819
EMBL:AADN02041820 EMBL:AADN02041821 EMBL:AADN02041822
EMBL:AADN02041823 EMBL:AADN02041824 EMBL:AADN02041825
EMBL:AADN02041826 EMBL:AADN02041827 EMBL:AADN02041828
EMBL:AADN02041829 EMBL:AADN02041830 EMBL:AADN02041831
EMBL:AADN02041832 EMBL:AADN02041833 IPI:IPI00820763
Ensembl:ENSGALT00000040809 ArrayExpress:E1C6M5 Uniprot:E1C6M5
Length = 1072
Score = 279 (103.3 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 54/90 (60%), Positives = 71/90 (78%)
Query: 154 EKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQTDPF 213
+ L + Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+STIARHLLSDQTDPF
Sbjct: 974 QSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPF 1033
Query: 214 NRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
NRSPLTM+Q+ PN +L+ +IQ W+ + R+K
Sbjct: 1034 NRSPLTMDQIRPNRELKEKIQQWLAE-RKK 1062
Score = 201 (75.8 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 15 HVGHESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAML 74
++ E+ R+ +S LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +ML
Sbjct: 828 NLSQEARREKESS-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISML 886
Query: 75 NYFLFHLVGPKMRNFK 90
NYFL HLVGPKM K
Sbjct: 887 NYFLQHLVGPKMGALK 902
Score = 36 (17.7 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 18/77 (23%), Positives = 28/77 (36%)
Query: 2 FCLRLTVTTTLEFHVGHESYRKSDSGFLQHIG---------MMARFDNILGNETIHTLEY 52
F R + L + G +SYR+S + + RF N+L N+ I L+
Sbjct: 747 FNYRRPMYPILRYMWGTDSYRQSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDE 806
Query: 53 LTSEIRSIFCHSTMVDR 69
+ I DR
Sbjct: 807 AIQYLSKIKIQQIEKDR 823
>UNIPROTKB|F1NIK2 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AADN02041816 EMBL:AADN02041817
EMBL:AADN02041818 EMBL:AADN02041819 EMBL:AADN02041820
EMBL:AADN02041821 EMBL:AADN02041822 EMBL:AADN02041823
EMBL:AADN02041824 EMBL:AADN02041825 EMBL:AADN02041826
EMBL:AADN02041827 EMBL:AADN02041828 EMBL:AADN02041829
EMBL:AADN02041830 EMBL:AADN02041831 EMBL:AADN02041832
EMBL:AADN02041833 IPI:IPI00679951 Ensembl:ENSGALT00000011196
ArrayExpress:F1NIK2 Uniprot:F1NIK2
Length = 1072
Score = 279 (103.3 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 54/90 (60%), Positives = 71/90 (78%)
Query: 154 EKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQTDPF 213
+ L + Q +E A A DE+LDPIM+T+M +PV LPSSR T+D+STIARHLLSDQTDPF
Sbjct: 974 QSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPF 1033
Query: 214 NRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
NRSPLTM+Q+ PN +L+ +IQ W+ + R+K
Sbjct: 1034 NRSPLTMDQIRPNRELKEKIQQWLAE-RKK 1062
Score = 201 (75.8 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 15 HVGHESYRKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAML 74
++ E+ R+ +S LQ G +ARF NI+ NETI TL +LTSEI+S+F H + +RI +ML
Sbjct: 827 NLSQEARREKESS-LQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISML 885
Query: 75 NYFLFHLVGPKMRNFK 90
NYFL HLVGPKM K
Sbjct: 886 NYFLQHLVGPKMGALK 901
Score = 36 (17.7 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 18/77 (23%), Positives = 28/77 (36%)
Query: 2 FCLRLTVTTTLEFHVGHESYRKSDSGFLQHIG---------MMARFDNILGNETIHTLEY 52
F R + L + G +SYR+S + + RF N+L N+ I L+
Sbjct: 746 FNYRRPMYPILRYMWGTDSYRQSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDE 805
Query: 53 LTSEIRSIFCHSTMVDR 69
+ I DR
Sbjct: 806 AIQYLSKIKIQQIEKDR 822
>ZFIN|ZDB-GENE-070410-21 [details] [associations]
symbol:ube4a "ubiquitination factor E4A (UFD2
homolog, yeast)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 ZFIN:ZDB-GENE-070410-21
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 CTD:9354 GeneTree:ENSGT00390000009300 KO:K10596
EMBL:CR847931 IPI:IPI00631668 RefSeq:XP_001922961.2
UniGene:Dr.160617 UniGene:Dr.69923 Ensembl:ENSDART00000059376
GeneID:557121 KEGG:dre:557121 NextBio:20881830 Bgee:E7F6E1
Uniprot:E7F6E1
Length = 1076
Score = 288 (106.4 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 53/92 (57%), Positives = 71/92 (77%)
Query: 153 VEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQTDP 212
++ L + Q +E + APDE+LDPIM+T+ML+PV LPSS T+D+STIARHLLSDQTDP
Sbjct: 978 IKSLADRHQQEEETFSDAPDEFLDPIMSTLMLDPVLLPSSNVTVDRSTIARHLLSDQTDP 1037
Query: 213 FNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
FNRSPLTM+Q+ PN +L+ QI W+ +Q +
Sbjct: 1038 FNRSPLTMDQIRPNEELRQQIMKWLADHKQSN 1069
Score = 188 (71.2 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 37/69 (53%), Positives = 46/69 (66%)
Query: 22 RKSDSGFLQHIGMMARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHL 81
R+ LQ G + RF NI+ NETI TL +LTSEI+ +F H + +RI +MLNYFL HL
Sbjct: 836 RREKESSLQMFGQLGRFHNIMSNETIGTLAFLTSEIKGLFVHPFLAERIISMLNYFLQHL 895
Query: 82 VGPKMRNFK 90
VGPKM K
Sbjct: 896 VGPKMGALK 904
Score = 38 (18.4 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 2 FCLRLTVTTTLEFHVGHESYRKSDSGFLQHIG---------MMARFDNILGNETIHTLE 51
F R + L++ G +SYR+S + + RF N+L N+ I L+
Sbjct: 749 FNYRRPMYAILKYMWGEKSYRESIKNLADYASENLEAMNPPLFLRFLNLLMNDAIFLLD 807
>POMBASE|SPAC20H4.10 [details] [associations]
symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
Length = 1010
Score = 216 (81.1 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
Identities = 43/91 (47%), Positives = 60/91 (65%)
Query: 153 VEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQTDP 212
VE Q ++E + PD +LDP+M TIM +PV LP S ++D+STI HLLSD TDP
Sbjct: 914 VEAFRLQEATEEEDMGDIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLLSDATDP 973
Query: 213 FNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
FNR+PLT++ V PN L+ +I +++ R K
Sbjct: 974 FNRTPLTLDDVTPNDTLREEINTFLKSKRNK 1004
Score = 126 (49.4 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
Identities = 28/49 (57%), Positives = 31/49 (63%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFK 90
LGNETI L+ TS I FC +VDR+AAMLNY L L GPK N K
Sbjct: 791 LGNETIFMLKLFTSSIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLK 839
>DICTYBASE|DDB_G0292264 [details] [associations]
symbol:nosA "U box domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 dictyBase:DDB_G0292264 GenomeReviews:CM000155_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AAFI02000189 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
KO:K10597 OMA:NERICKS EMBL:AF044255 PIR:T14576 RefSeq:XP_629703.1
ProteinModelPortal:O44007 EnsemblProtists:DDB0216192 GeneID:8628617
KEGG:ddi:DDB_G0292264 InParanoid:O44007 ProtClustDB:CLSZ2728734
Uniprot:O44007
Length = 1089
Score = 226 (84.6 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 143 IPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIA 202
+ + ++ + +E++ + + E L PDE+ DPI++T+M +PV LPSS+ +D+ TI
Sbjct: 989 LDEFSKLVIKLEQVAKEEEQAEEDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTIL 1048
Query: 203 RHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWI 237
RHLLSDQTDPFNRS LT E +I + + + +I +W+
Sbjct: 1049 RHLLSDQTDPFNRSHLTPEMLIDDVETKKKIDEWL 1083
Score = 105 (42.0 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 42 LGNETIHTLEYLTSE--IRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGK 98
L N I + +L+S+ I S F ++DRI+AM+NYFL +VGPK N K R P K
Sbjct: 874 LANSNIDMMLFLSSDKTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKV--REPEK 930
Score = 42 (19.8 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 37 RFDNILGNETIHTLEYLTSEIRSIFCHSTMVD 68
+F N+L N++I+ L+ +++ I + T+ D
Sbjct: 810 KFINMLINDSIYVLDEALAKLAKIKENQTLFD 841
>CGD|CAL0003403 [details] [associations]
symbol:orf19.5965 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
CGD:CAL0003403 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0034450
eggNOG:COG5113 KO:K10597 RefSeq:XP_723029.1 RefSeq:XP_723176.1
ProteinModelPortal:Q5AND8 STRING:Q5AND8 GeneID:3635164
GeneID:3635292 KEGG:cal:CaO19.13386 KEGG:cal:CaO19.5965
Uniprot:Q5AND8
Length = 1075
Score = 229 (85.7 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 48/98 (48%), Positives = 66/98 (67%)
Query: 142 LIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTI 201
+I L A EK +++E L PDE+LDP+M T+M +PV LPSSR ++D+STI
Sbjct: 958 IINGLIEFANKAEKARLDEENEELELGEIPDEFLDPLMFTLMEDPVILPSSRVSIDRSTI 1017
Query: 202 ARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQ 239
HLLSD TDPFNR PL +E VI + +L+ +IQD+ +Q
Sbjct: 1018 KAHLLSDSTDPFNRVPLKLEDVIDDVELKQKIQDFKQQ 1055
Score = 90 (36.7 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTS 92
L N+T+ + T E+ F +VDR+A ML+Y L LVGP+ N K +
Sbjct: 846 LSNKTMELFKLFTKEVPRGFVLPEIVDRLAGMLDYNLSILVGPRCSNLKVA 896
>TAIR|locus:2180862 [details] [associations]
symbol:AT5G15400 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 EMBL:AL391143 GO:GO:0034450
eggNOG:COG5113 KO:K10597 EMBL:BX832575 IPI:IPI00523200 PIR:T51518
RefSeq:NP_568313.2 UniGene:At.31807 HSSP:Q14139
ProteinModelPortal:Q9LF41 SMR:Q9LF41 PaxDb:Q9LF41 PRIDE:Q9LF41
ProMEX:Q9LF41 EnsemblPlants:AT5G15400.1 GeneID:831392
KEGG:ath:AT5G15400 TAIR:At5g15400 HOGENOM:HOG000240160
InParanoid:Q9LF41 OMA:CFFLTLT PhylomeDB:Q9LF41
ProtClustDB:CLSN2681049 Genevestigator:Q9LF41 Uniprot:Q9LF41
Length = 1038
Score = 278 (102.9 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 74/225 (32%), Positives = 114/225 (50%)
Query: 35 MARFDNILGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRR 94
+ R D L NE + L + + EI + F MV+R+A MLNYFL LVGP+ ++ S +
Sbjct: 792 IVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSL--SLK 849
Query: 95 SPGKQEGVGSIPAER--KLKLN-------------ISTXXXXXXXXXXXXXXXXXARIGG 139
P K E ++ ++ +N IS+ RIG
Sbjct: 850 DPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADVLRRIGE 909
Query: 140 AS-LIPDLRRVAVLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDK 198
+I + + + ++ EA L PDE+LDPI T+M +PV LPSSR T+D+
Sbjct: 910 EGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVILPSSRITVDR 969
Query: 199 STIARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
I RHLLSD DPFNR+ LT + +IP+ +L+ +I ++++ + K
Sbjct: 970 PIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSK 1014
>ASPGD|ASPL0000072757 [details] [associations]
symbol:AN10556 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:BN001303 GO:GO:0000151 GO:GO:0034450 OMA:CFFLTLT
EnsemblFungi:CADANIAT00006010 Uniprot:C8V8J9
Length = 1095
Score = 213 (80.0 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 45/98 (45%), Positives = 66/98 (67%)
Query: 145 DLRRVAVLVEKLGAQLQSDEAL---LAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTI 201
+L+R L K+ +SD+ L PDE+LDP+M T+M +PV LP+S+ ++D+ST+
Sbjct: 977 ELKRWDQLQLKVKEAKESDDQAEEDLGEIPDEFLDPLMYTLMEDPVILPASKISIDRSTL 1036
Query: 202 ARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQ 239
HLLSD DPFNR PL ME V P+T L+ +I+++ RQ
Sbjct: 1037 RAHLLSDPHDPFNRVPLKMEDVAPDTDLKAKIEEFKRQ 1074
Score = 83 (34.3 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFK 90
L NET+ L+ T + F +V R+A ML+Y L +VGPK N +
Sbjct: 865 LTNETVAMLKLFTEALADSFTMPEIVQRLADMLDYNLDAMVGPKSSNLR 913
Score = 40 (19.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 31 HIGMMARFDNILGNETIHTLEYLTSEIRSIF 61
H+ +F N+L N+ + L+ ++I+
Sbjct: 797 HLDFFVQFVNLLLNDVTYVLDESFGSFKTIY 827
Score = 38 (18.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 74 LNYFLFHLVGPKMRNFKTSRRSPGK 98
++Y F L P+M + + RSP K
Sbjct: 238 MSYAAFALTMPEMFGLEPTGRSPLK 262
>FB|FBgn0032467 [details] [associations]
symbol:CG9934 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 KO:K10597 FlyBase:FBgn0032467
EMBL:AY094803 RefSeq:NP_001162967.1 RefSeq:NP_609597.1
UniGene:Dm.6565 SMR:Q9VK44 IntAct:Q9VK44 MINT:MINT-1676904
EnsemblMetazoa:FBtr0080428 EnsemblMetazoa:FBtr0301247 GeneID:34699
KEGG:dme:Dmel_CG9934 UCSC:CG9934-RA InParanoid:Q9VK44 OMA:RYANRNN
GenomeRNAi:34699 NextBio:789760 Uniprot:Q9VK44
Length = 1217
Score = 265 (98.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 73/216 (33%), Positives = 109/216 (50%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQ-- 99
L ET+ YLTS+I+ F +VDR+++MLN+ L L GPK + K ++P K
Sbjct: 1002 LARETVDLFHYLTSDIKEPFMRDELVDRLSSMLNFNLKQLAGPKCNDLKV--KNPAKYGW 1059
Query: 100 EGVGSIPAERKLKLNISTXXXXXXXXXXXXXXXXXARIGGASLIPDLR-RVAVLVEKLGA 158
E + + L++ AS I L R AV VE+ A
Sbjct: 1060 EPRSLLAQIFDIYLHLDCDRFAEALAADERSFDVQICNEAASRIKRLALRSAVEVERFKA 1119
Query: 159 -----------QLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLS 207
LQ+++ A APDE+ DP+M+T+M +PV LPS +D++ I RHLL+
Sbjct: 1120 LTQRAHEIYVTNLQTEDEC-ADAPDEFKDPLMDTLMSDPVVLPSGT-VMDRAIITRHLLN 1177
Query: 208 DQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQK 243
TDPFNR PLT + ++ N +L+ +I W ++ R K
Sbjct: 1178 SCTDPFNRQPLTEDMLVANIELKQRIDAWRKEQRGK 1213
>SGD|S000002349 [details] [associations]
symbol:UFD2 "Ubiquitin chain assembly factor (E4)"
species:4932 "Saccharomyces cerevisiae" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IMP;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006950 "response to
stress" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 SGD:S000002349 GO:GO:0005634
GO:GO:0005737 GO:GO:0006950 EMBL:BK006938 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 EMBL:X83276 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 PDB:3M63 PDBsum:3M63 PDB:3M62
PDBsum:3M62 GeneTree:ENSGT00390000009300 KO:K10597 OMA:CFFLTLT
OrthoDB:EOG4MPMZ8 EMBL:U22154 EMBL:Z74238 PIR:S58787
RefSeq:NP_010091.2 PDB:2QIZ PDB:2QJ0 PDBsum:2QIZ PDBsum:2QJ0
ProteinModelPortal:P54860 SMR:P54860 DIP:DIP-5925N IntAct:P54860
MINT:MINT-680185 STRING:P54860 PaxDb:P54860 PeptideAtlas:P54860
EnsemblFungi:YDL190C GeneID:851337 KEGG:sce:YDL190C CYGD:YDL190c
HOGENOM:HOG000248797 EvolutionaryTrace:P54860 NextBio:968408
Genevestigator:P54860 GermOnline:YDL190C Uniprot:P54860
Length = 961
Score = 242 (90.2 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 69/216 (31%), Positives = 109/216 (50%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ++++ E + +I + F +V R+A+MLNY L LVGPK K
Sbjct: 740 LADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNP 799
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX---AR----IGGASLI--PD-LRRVAV 151
+ A + +N+S R +G + + P+ + ++
Sbjct: 800 KDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLN 859
Query: 152 LVEKLGAQLQSDEA--LLAG-APDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSD 208
K Q ++DE L G PDE+LDP+M TIM +PV LP+S+ +D+STI HLLSD
Sbjct: 860 FANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSD 919
Query: 209 QTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
TDPFNR PL +E V PN +L+ +I + +Q ++++
Sbjct: 920 STDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEA 955
>UNIPROTKB|I3LQG8 [details] [associations]
symbol:LOC100737278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:FP104527 EMBL:FP565389
Ensembl:ENSSSCT00000024710 OMA:INECTHY Uniprot:I3LQG8
Length = 289
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 76 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 135
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 136 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 195
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 196 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 254
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QI W+R+ +Q S
Sbjct: 255 DPFNRQTLTESMLEPVPELKEQIHAWMRE-KQNS 287
>ZFIN|ZDB-GENE-020205-1 [details] [associations]
symbol:ube4b "ubiquitination factor E4B, UFD2 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
ZFIN:ZDB-GENE-020205-1 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:BX571850 IPI:IPI00996876
Ensembl:ENSDART00000126384 ArrayExpress:E7FEA3 Bgee:E7FEA3
Uniprot:E7FEA3
Length = 1362
Score = 241 (89.9 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 68/210 (32%), Positives = 102/210 (48%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRS-----P 96
L ET+ LT +++ F + R+AAMLNY L L GPK R+ K P
Sbjct: 1149 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEP 1208
Query: 97 GKQ-EGVGSIPAER---KLKLNISTXXXXXXXXXXXXXXXXXARIGGASLIPDLRRVAVL 152
K + + I + + I+ + G S I + + +L
Sbjct: 1209 KKLLDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIA-IEKFKLL 1267
Query: 153 VEKLG---AQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQ 209
+EK+ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+
Sbjct: 1268 LEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGN-IMDRSIILRHLLNSP 1326
Query: 210 TDPFNRSPLTMEQVIPNTQLQTQIQDWIRQ 239
TDPFNR PLT + P +L+ +IQ W+R+
Sbjct: 1327 TDPFNRQPLTESMLEPVPELKERIQAWMRE 1356
>UNIPROTKB|O95155 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0009411 "response to UV" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=TAS] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
EMBL:AF043117 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 GO:GO:0019899 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0042787
GO:GO:0034976 GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
EMBL:AL590639 PDB:3L1Z PDBsum:3L1Z EMBL:AB028839 EMBL:AF331520
EMBL:AB014584 EMBL:AL096841 EMBL:BC093696 EMBL:AF091093
IPI:IPI00005715 IPI:IPI00555735 IPI:IPI00655534 PIR:T00358
RefSeq:NP_001099032.1 RefSeq:NP_006039.2 UniGene:Hs.593974 PDB:2KRE
PDB:3L1X PDBsum:2KRE PDBsum:3L1X ProteinModelPortal:O95155
SMR:O95155 DIP:DIP-40309N IntAct:O95155 MINT:MINT-2798575
STRING:O95155 PhosphoSite:O95155 PaxDb:O95155 PRIDE:O95155
Ensembl:ENST00000253251 Ensembl:ENST00000343090
Ensembl:ENST00000377157 GeneID:10277 KEGG:hsa:10277 UCSC:uc001aqr.4
UCSC:uc001aqs.4 CTD:10277 GeneCards:GC01P010092 HGNC:HGNC:12500
HPA:HPA019219 MIM:613565 neXtProt:NX_O95155 PharmGKB:PA37148
HOGENOM:HOG000294109 HOVERGEN:HBG058129 InParanoid:O95155 KO:K10597
OMA:TCKETEM ChiTaRS:UBE4B EvolutionaryTrace:O95155 GenomeRNAi:10277
NextBio:38932 PMAP-CutDB:O95155 ArrayExpress:O95155 Bgee:O95155
CleanEx:HS_UBE4B Genevestigator:O95155 GermOnline:ENSG00000130939
Uniprot:O95155
Length = 1302
Score = 234 (87.4 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 67/214 (31%), Positives = 98/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 1089 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1148
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1149 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1208
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1209 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1267
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QIQ W+R+ +Q S
Sbjct: 1268 DPFNRQTLTESMLEPVPELKEQIQAWMRE-KQNS 1300
>RGD|1304738 [details] [associations]
symbol:Ube4b "ubiquitination factor E4B" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0003222
"ventricular trabecula myocardium morphogenesis" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0009411 "response
to UV" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA;ISO] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=ISO] [GO:0044257 "cellular protein catabolic
process" evidence=ISO] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 RGD:1304738
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00359635
PRIDE:F1M8V2 Ensembl:ENSRNOT00000055572 ArrayExpress:F1M8V2
Uniprot:F1M8V2
Length = 1172
Score = 233 (87.1 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 67/214 (31%), Positives = 98/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 959 LATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1018
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1019 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1078
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1079 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1137
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QIQ W+R+ +Q S
Sbjct: 1138 DPFNRQMLTESMLEPVPELKEQIQAWMRE-KQSS 1170
>UNIPROTKB|A6QNS2 [details] [associations]
symbol:UBE4B "UBE4B protein" species:9913 "Bos taurus"
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0034976
GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
GeneTree:ENSGT00390000009300 CTD:10277 HOGENOM:HOG000294109
HOVERGEN:HBG058129 KO:K10597 OMA:TCKETEM EMBL:DAAA02042992
EMBL:BC148970 IPI:IPI00691225 RefSeq:NP_001095974.1
UniGene:Bt.17976 STRING:A6QNS2 Ensembl:ENSBTAT00000013729
GeneID:520833 KEGG:bta:520833 InParanoid:A6QNS2 OrthoDB:EOG4C87RK
NextBio:20873187 Uniprot:A6QNS2
Length = 1362
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 1149 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1208
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1209 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1268
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1269 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1327
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QI W+R+ +Q S
Sbjct: 1328 DPFNRQTLTESMLEPVPELKEQIHAWMRE-KQNS 1360
>UNIPROTKB|J9P2H4 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 CTD:10277 KO:K10597 EMBL:AAEX03003938
RefSeq:XP_849824.2 Ensembl:ENSCAFT00000046848 GeneID:479603
KEGG:cfa:479603 Uniprot:J9P2H4
Length = 1173
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 960 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1019
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1020 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1079
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1080 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1138
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QI W+R+ +Q S
Sbjct: 1139 DPFNRQMLTENMLEPVPELKEQIHAWMRE-KQNS 1171
>UNIPROTKB|F1NGY1 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000209 GO:GO:0000151 GO:GO:0034976 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AADN02040784
IPI:IPI00594565 Ensembl:ENSGALT00000004175 Uniprot:F1NGY1
Length = 1182
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 67/211 (31%), Positives = 97/211 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 968 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1027
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1028 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1087
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1088 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSST 1146
Query: 211 DPFNRSPLT---MEQVIPNTQLQTQIQDWIR 238
DPFNR LT +E V+P +L+ QIQ W+R
Sbjct: 1147 DPFNRQTLTENMLEPVVP--ELKEQIQAWMR 1175
>UNIPROTKB|F1P7I0 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AAEX03003938
Ensembl:ENSCAFT00000031485 Uniprot:F1P7I0
Length = 1312
Score = 228 (85.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 1099 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1158
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1159 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1218
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1219 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1277
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QI W+R+ +Q S
Sbjct: 1278 DPFNRQMLTENMLEPVPELKEQIHAWMRE-KQNS 1310
>UNIPROTKB|J9P9M3 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AAEX03003938
Ensembl:ENSCAFT00000046404 Uniprot:J9P9M3
Length = 1360
Score = 228 (85.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 66/214 (30%), Positives = 97/214 (45%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 1147 LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1206
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1207 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1266
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQT 210
VE++ A+ E + APDE+ DP+M+T+M +PV LPS +D+S I RHLL+ T
Sbjct: 1267 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNSPT 1325
Query: 211 DPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
DPFNR LT + P +L+ QI W+R+ +Q S
Sbjct: 1326 DPFNRQMLTENMLEPVPELKEQIHAWMRE-KQNS 1358
>WB|WBGene00006734 [details] [associations]
symbol:ufd-2 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040011
GO:GO:0007283 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 EMBL:Z47812 GO:GO:0000151
GO:GO:0051865 GO:GO:0034450 GO:GO:0042006
GeneTree:ENSGT00390000009300 KO:K10597 UniGene:Cel.7502
GeneID:174295 KEGG:cel:CELE_T05H10.5 UCSC:T05H10.5a CTD:174295
HOGENOM:HOG000020029 NextBio:883404 RefSeq:NP_495691.1
ProteinModelPortal:Q95QB5 SMR:Q95QB5 IntAct:Q95QB5
MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 189 (71.6 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 42/106 (39%), Positives = 67/106 (63%)
Query: 137 IGGASLIPDLRRVAVLVEK-LGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQT 195
I G S + +A V+K A+ + +E P+E+ DPIM+ IM++PV LPS
Sbjct: 877 IVGFSQLESFEHLAEDVKKEYEAKAELEEEY-DDVPEEFKDPIMDAIMVDPVKLPSGH-V 934
Query: 196 LDKSTIARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCR 241
+D++ I RHLLS +PFNR+PL+ ++ P+++L+ +IQ+WI Q R
Sbjct: 935 MDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWICQKR 980
Score = 57 (25.1 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 68 DRIAAMLNYFLFHLVGPKMRNFKTSR-RSPG--KQEGVGSIPAERKLKLNI 115
+R+AAMLN+ L L+G K K RS G +E V S+ LKLN+
Sbjct: 797 ERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFV-SLLISIYLKLNM 846
>UNIPROTKB|Q95QB5 [details] [associations]
symbol:ufd-2 "Protein UFD-2, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040011 GO:GO:0007283 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 EMBL:Z47812 GO:GO:0000151 GO:GO:0051865 GO:GO:0034450
GO:GO:0042006 GeneTree:ENSGT00390000009300 KO:K10597
UniGene:Cel.7502 GeneID:174295 KEGG:cel:CELE_T05H10.5
UCSC:T05H10.5a CTD:174295 HOGENOM:HOG000020029 NextBio:883404
RefSeq:NP_495691.1 ProteinModelPortal:Q95QB5 SMR:Q95QB5
IntAct:Q95QB5 MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 189 (71.6 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 42/106 (39%), Positives = 67/106 (63%)
Query: 137 IGGASLIPDLRRVAVLVEK-LGAQLQSDEALLAGAPDEYLDPIMNTIMLEPVTLPSSRQT 195
I G S + +A V+K A+ + +E P+E+ DPIM+ IM++PV LPS
Sbjct: 877 IVGFSQLESFEHLAEDVKKEYEAKAELEEEY-DDVPEEFKDPIMDAIMVDPVKLPSGH-V 934
Query: 196 LDKSTIARHLLSDQTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCR 241
+D++ I RHLLS +PFNR+PL+ ++ P+++L+ +IQ+WI Q R
Sbjct: 935 MDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWICQKR 980
Score = 57 (25.1 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 68 DRIAAMLNYFLFHLVGPKMRNFKTSR-RSPG--KQEGVGSIPAERKLKLNI 115
+R+AAMLN+ L L+G K K RS G +E V S+ LKLN+
Sbjct: 797 ERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFV-SLLISIYLKLNM 846
>UNIPROTKB|F1M8D6 [details] [associations]
symbol:Ube4b "Protein Ube4b" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 RGD:1304738 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0031175 GO:GO:0000209 GO:GO:0000151
GO:GO:0034976 GO:GO:0034450 GO:GO:0003222
GeneTree:ENSGT00390000009300 IPI:IPI00958178 PRIDE:F1M8D6
Ensembl:ENSRNOT00000021197 ArrayExpress:F1M8D6 Uniprot:F1M8D6
Length = 1174
Score = 215 (80.7 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 66/216 (30%), Positives = 97/216 (44%)
Query: 42 LGNETIHTLEYLTSEIRSIFCHSTMVDRIAAMLNYFLFHLVGPKMRNFKTSRRSPGKQEG 101
L ET+ LT +++ F + R+AAMLN+ L L GPK R+ K E
Sbjct: 959 LATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP 1018
Query: 102 VGSIPAERKLKLNISTXXXXXXXXXXXXXXXXX-----------ARIGGASLIPDLRRVA 150
+ + L + A I I + +A
Sbjct: 1019 KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1078
Query: 151 VLVEKLGAQLQSDEALLAGAPDEYLD--PIMNTIMLEPVTLPSSRQTLDKSTIARHLLSD 208
VE++ A+ E + APDE+ P+M+T+M +PV LPS +D+S I RHLL+
Sbjct: 1079 EKVEEIVAKNARAEIDYSDAPDEFRGKYPLMDTLMTDPVRLPSGT-IMDRSIILRHLLNS 1137
Query: 209 QTDPFNRSPLTMEQVIPNTQLQTQIQDWIRQCRQKS 244
TDPFNR LT + P +L+ QIQ W+R+ +Q S
Sbjct: 1138 PTDPFNRQMLTESMLEPVPELKEQIQAWMRE-KQSS 1172
>DICTYBASE|DDB_G0282185 [details] [associations]
symbol:DDB_G0282185 "U box domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
dictyBase:DDB_G0282185 EMBL:AAFI02000045 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 RefSeq:XP_640334.2
EnsemblProtists:DDB0252889 GeneID:8623435 KEGG:ddi:DDB_G0282185
Uniprot:Q54SX5
Length = 790
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 168 AGAPDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLSDQ-TDPFNRSPLTMEQVIPN 226
AG P +LDPI +M +PVTLPS +D+STI +H + TDP++ P+T + N
Sbjct: 581 AGIPTTFLDPITLKMMSDPVTLPSG-YIVDRSTIQKHFRNQYFTDPYSGKPITPSDIQTN 639
Query: 227 TQLQTQIQDW 236
L +I+ +
Sbjct: 640 HLLCAKIKQF 649
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 101 (40.6 bits), Expect = 0.00081, P = 0.00081
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 171 PDEYLDPIMNTIMLEPVTLPSSRQTLDKSTIARHLLS-DQTDPFNRSPLTMEQVIPNTQL 229
PD I +M EP PS T D+ I HL DP RSPLT EQ+IPN +
Sbjct: 82 PDYLCGKISFELMREPCITPSGI-TYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 140
Query: 230 QTQIQDWIRQ 239
+ I +I +
Sbjct: 141 KEVIDAFISE 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 229 0.00082 113 3 11 22 0.37 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 591 (63 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.13u 0.08s 18.21t Elapsed: 00:00:05
Total cpu time: 18.13u 0.08s 18.21t Elapsed: 00:00:05
Start: Thu Aug 15 10:58:46 2013 End: Thu Aug 15 10:58:51 2013