BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17231
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91083305|ref|XP_974665.1| PREDICTED: similar to rab [Tribolium castaneum]
gi|270007739|gb|EFA04187.1| hypothetical protein TcasGA2_TC014436 [Tribolium castaneum]
Length = 207
Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/191 (69%), Positives = 156/191 (81%), Gaps = 19/191 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+IK+PEQKVILCGEYGVGKSS+FRR+ +TF++++ RKSTLGLD+++K Y+V DR ++
Sbjct: 1 MATIKIPEQKVILCGEYGVGKSSIFRRFTNNTFVTATDRKSTLGLDHYSKTYRVCDRDLK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVASITSSYYKFAEAA+LVF+LDN ASFHVLSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASITSSYYKFAEAAVLVFALDNPASFHVLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLI+ TYKTSCKTGEG+EEMF DI QL+ SNRS
Sbjct: 121 GNKADLLSDVPQITDSEIEAFCEQCHNLITGTYKTSCKTGEGIEEMFTDIAYQLVQSNRS 180
Query: 162 RLELQTMGAGG 172
RLELQ+M G
Sbjct: 181 RLELQSMEQHG 191
>gi|242018215|ref|XP_002429575.1| GTP-binding protein YPT31/YPT8, putative [Pediculus humanus
corporis]
gi|212514533|gb|EEB16837.1| GTP-binding protein YPT31/YPT8, putative [Pediculus humanus
corporis]
Length = 207
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 160/199 (80%), Gaps = 24/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS+K+P+QKVILCGE+GVGKSS+FRRYA +TF+++ RKSTLGLD+F+K Y VD R I+
Sbjct: 1 MASVKIPKQKVILCGEFGVGKSSIFRRYATNTFVTAVDRKSTLGLDHFDKTYAVDGREIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVASITSSYYKFAEAAILVF+LDNA+SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASITSSYYKFAEAAILVFALDNASSFHILSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKT EG++EMF+DI +QL+ SN+S
Sbjct: 121 GNKSDLISPVPQISDNDIESFCEQCHNLISGVYKTSCKTAEGIDEMFSDIAQQLVESNKS 180
Query: 162 RLELQTMGAGGIGTDSFKL 180
R++L+ + A DSFK+
Sbjct: 181 RIDLKNLDA-----DSFKV 194
>gi|383857745|ref|XP_003704364.1| PREDICTED: GTP-binding protein ypt7-like [Megachile rotundata]
Length = 207
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 155/199 (77%), Gaps = 24/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++S+ RKSTLGLDN +KEY V+DR I+
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVTSNDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN +SFH+LSQHLLEIVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNPSSFHLLSQHLLEIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKTGEG+ EMF DI + L+ +NRS
Sbjct: 121 GNKSDLESTASQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGIHEMFEDIAQHLVEANRS 180
Query: 162 RLELQTMGAGGIGTDSFKL 180
R+EL M D FK+
Sbjct: 181 RMELHEMDK-----DRFKI 194
>gi|340723419|ref|XP_003400087.1| PREDICTED: GTP-binding protein ypt7-like [Bombus terrestris]
gi|350427736|ref|XP_003494860.1| PREDICTED: GTP-binding protein ypt7-like [Bombus impatiens]
Length = 207
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 155/199 (77%), Gaps = 24/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++SS RKSTLGLDN +KEY V+DR I+
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVTSSDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKTGEG+ EMF DI + L+ +NRS
Sbjct: 121 GNKSDLESTAPQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGIHEMFEDIAQHLVEANRS 180
Query: 162 RLELQTMGAGGIGTDSFKL 180
R+EL M D FK+
Sbjct: 181 RMELHEMDK-----DRFKI 194
>gi|307175180|gb|EFN65273.1| GTP-binding protein ypt7 [Camponotus floridanus]
Length = 207
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 155/199 (77%), Gaps = 24/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++SS RKSTLGLDN +KEY V+DR I+
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVASSDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKTGEG+ EMF DI + L+ +NRS
Sbjct: 121 GNKSDLESVAPQVTDVEMEQFCEQCHNLISGIYKTSCKTGEGINEMFEDIAQHLVEANRS 180
Query: 162 RLELQTMGAGGIGTDSFKL 180
R+EL M D FK+
Sbjct: 181 RMELHEMDK-----DRFKI 194
>gi|323434871|gb|ADX66426.1| Rab7 [Helicoverpa zea]
Length = 207
Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 158/206 (76%), Gaps = 24/206 (11%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +K P KVILCGEYGVGKSS+FRR+ +TF+ +S R+STLGLD+F K Y++ D++++
Sbjct: 1 MAVVKTPVLKVILCGEYGVGKSSIFRRFINNTFVPNSDRRSTLGLDHFEKPYQLTDKTVK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMER+AS+TSSYYKFAEAAILVFSLDNA+SFHVLSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHVLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS+TYKTSCKTG+G+EEMF DI QL+ SNRS
Sbjct: 121 GNKSDLEGSSPQVTDADIETFCEQCHNLISTTYKTSCKTGQGIEEMFTDIAIQLVESNRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
R+ELQT+ +SFK+ E
Sbjct: 181 RIELQTLDH-----NSFKISNPEPVE 201
>gi|380017524|ref|XP_003692704.1| PREDICTED: GTP-binding protein ypt7-like [Apis florea]
Length = 207
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 155/199 (77%), Gaps = 24/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TFI+S+ RKSTLGLDN +KEY V+DR I+
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFIASNDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKTGEG+ EMF DI + L+ +NRS
Sbjct: 121 GNKSDLESSSPQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGIHEMFEDIAQHLVEANRS 180
Query: 162 RLELQTMGAGGIGTDSFKL 180
R+EL M D FK+
Sbjct: 181 RMELHEMDK-----DRFKI 194
>gi|19923014|ref|NP_612052.1| RabX6, isoform A [Drosophila melanogaster]
gi|7291991|gb|AAF47406.1| RabX6, isoform A [Drosophila melanogaster]
gi|17946473|gb|AAL49269.1| RE70650p [Drosophila melanogaster]
gi|220958190|gb|ACL91638.1| RabX6-PA [synthetic construct]
Length = 213
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 160/206 (77%), Gaps = 19/206 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TFI+ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATMRIPKQKVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLDGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
++ELQ + D+ G +EE
Sbjct: 181 KMELQALEHKSFQVDTASSGAATNEE 206
>gi|194864654|ref|XP_001971045.1| GG14733 [Drosophila erecta]
gi|195490177|ref|XP_002093033.1| GE21097 [Drosophila yakuba]
gi|190652828|gb|EDV50071.1| GG14733 [Drosophila erecta]
gi|194179134|gb|EDW92745.1| GE21097 [Drosophila yakuba]
Length = 213
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 160/206 (77%), Gaps = 19/206 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TF++ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATMRIPKQKVILCGDYGVGKSSLFRRFATNTFVTDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
++ELQ + D+ G +EE
Sbjct: 181 KMELQALEHKSFQVDTASSGAATNEE 206
>gi|442629247|ref|NP_001261219.1| RabX6, isoform B [Drosophila melanogaster]
gi|440215083|gb|AGB93914.1| RabX6, isoform B [Drosophila melanogaster]
Length = 222
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 160/206 (77%), Gaps = 19/206 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TFI+ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATMRIPKQKVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLDGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
++ELQ + D+ G +EE
Sbjct: 181 KMELQALEHKSFQVDTASSGAATNEE 206
>gi|194749925|ref|XP_001957386.1| GF10394 [Drosophila ananassae]
gi|190624668|gb|EDV40192.1| GF10394 [Drosophila ananassae]
Length = 212
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 156/196 (79%), Gaps = 19/196 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TF++ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATVRIPKQKVILCGDYGVGKSSLFRRFATNTFVTDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDS 177
++ELQ + DS
Sbjct: 181 KMELQALEQKSFQVDS 196
>gi|322786585|gb|EFZ12980.1| hypothetical protein SINV_03815 [Solenopsis invicta]
Length = 211
Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 155/203 (76%), Gaps = 28/203 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDR--- 57
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++SS RKSTLGLDN +KEY V+DR
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVASSDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 58 -SIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK 116
S+ +QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAK
Sbjct: 61 VSVNLQLWDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAK 120
Query: 117 IFLCGNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLIL 157
IFLCGN EQCHNLIS YKTSCKTGEGV EMF DI + L+
Sbjct: 121 IFLCGNKSDLESVAPQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGVNEMFEDIAQHLVE 180
Query: 158 SNRSRLELQTMGAGGIGTDSFKL 180
+NRSR+EL M D FK+
Sbjct: 181 ANRSRMELHEMDK-----DRFKI 198
>gi|195586742|ref|XP_002083131.1| GD13569 [Drosophila simulans]
gi|194195140|gb|EDX08716.1| GD13569 [Drosophila simulans]
Length = 213
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 159/206 (77%), Gaps = 19/206 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TF++ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATMRIPKQKVILCGDYGVGKSSLFRRFATNTFVTDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
++ELQ + D+ +EE
Sbjct: 181 KMELQALEHKSFQVDTSSSSAATNEE 206
>gi|195126242|ref|XP_002007583.1| GI13021 [Drosophila mojavensis]
gi|193919192|gb|EDW18059.1| GI13021 [Drosophila mojavensis]
Length = 211
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 153/187 (81%), Gaps = 19/187 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS+++P+QKVILCG+YGVGKSSLFRR+ +TFI+ + RKSTLGLD+ ++EY V ++ I+
Sbjct: 1 MASVRIPKQKVILCGDYGVGKSSLFRRFTNNTFITETDRKSTLGLDHIDREYNVGEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC+TG+G+EEMF DI RQL+ +NRS
Sbjct: 121 GNKCDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRTGKGIEEMFQDISRQLVQANRS 180
Query: 162 RLELQTM 168
++ELQ +
Sbjct: 181 KMELQAL 187
>gi|125977532|ref|XP_001352799.1| GA11338 [Drosophila pseudoobscura pseudoobscura]
gi|195169764|ref|XP_002025685.1| GL20707 [Drosophila persimilis]
gi|54641549|gb|EAL30299.1| GA11338 [Drosophila pseudoobscura pseudoobscura]
gi|194109178|gb|EDW31221.1| GL20707 [Drosophila persimilis]
Length = 211
Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 153/196 (78%), Gaps = 19/196 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +++P+QKVILCG+YGVGKSSLFRR+ +TF++ + RKSTLGLD+ ++EY V D+ I+
Sbjct: 1 MAIVRIPKQKVILCGDYGVGKSSLFRRFTNNTFVTETDRKSTLGLDHIDREYDVGDKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC+TG GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRTGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDS 177
++ELQ + D+
Sbjct: 181 KMELQALEQKSFKIDT 196
>gi|114052701|ref|NP_001040271.1| ras-related protein Rab7 [Bombyx mori]
gi|87248579|gb|ABD36342.1| ras-related protein Rab7 [Bombyx mori]
Length = 207
Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 155/201 (77%), Gaps = 24/201 (11%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +K P KVILCGEYGVGKSSLFRR+ +TF+ +S R++TLGLD+F K Y+V D+ ++
Sbjct: 1 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMER+AS+TSSYYKFAEAAILVFSLDNA+SFH+LSQHLLEIV+YAENAKIFLC
Sbjct: 61 LQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILSQHLLEIVSYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNL++STYKTSCKTG+G+EEMFADI Q + +NRS
Sbjct: 121 GNKSDLEGASPQVTDADIETFCEQCHNLVNSTYKTSCKTGKGIEEMFADIALQRVEANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGG 182
R+ELQ + +SFK+
Sbjct: 181 RMELQ-----ALDQNSFKISN 196
>gi|195336378|ref|XP_002034817.1| GM14352 [Drosophila sechellia]
gi|194127910|gb|EDW49953.1| GM14352 [Drosophila sechellia]
Length = 213
Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 158/206 (76%), Gaps = 19/206 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+A +TF++ + RKSTLGLD+ ++EY V+++ I+
Sbjct: 1 MATMRIPKQKVILCGDYGVGKSSLFRRFATNTFVTDTDRKSTLGLDHIDREYSVNEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE ILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGVILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC++G GVEEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRS 180
Query: 162 RLELQTMGAGGIGTDSFKLGGRGSEE 187
++ELQ + D+ +EE
Sbjct: 181 KMELQALEHKSFQVDTSSSSAATNEE 206
>gi|195376637|ref|XP_002047099.1| GJ12112 [Drosophila virilis]
gi|194154257|gb|EDW69441.1| GJ12112 [Drosophila virilis]
Length = 211
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 152/187 (81%), Gaps = 19/187 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+ +TF++ + RKSTLGLD+ ++EY V ++ I+
Sbjct: 1 MATVRIPKQKVILCGDYGVGKSSLFRRFTNNTFVTETDRKSTLGLDHIDREYNVGEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH LIS+TYKTSC+TG+G+EEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHTLISATYKTSCRTGKGIEEMFQDISRQLVQANRS 180
Query: 162 RLELQTM 168
++ELQ +
Sbjct: 181 KMELQAL 187
>gi|195428674|ref|XP_002062394.1| GK17516 [Drosophila willistoni]
gi|194158479|gb|EDW73380.1| GK17516 [Drosophila willistoni]
Length = 213
Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 152/187 (81%), Gaps = 19/187 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +++P+QKVILCG+YGVGKSSLFRR+A ++F++ + RKSTLGLD+ +++Y V D+ I+
Sbjct: 1 MAKVRIPKQKVILCGDYGVGKSSLFRRFANNSFVTETDRKSTLGLDHIDRDYSVGDKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH LIS+TYKTSC+TG+G+EEMF DI RQL+ +NRS
Sbjct: 121 GNKSDLGGREPEVSDEEVEAFCEQCHTLISATYKTSCRTGQGIEEMFHDISRQLVHANRS 180
Query: 162 RLELQTM 168
++ELQ +
Sbjct: 181 KMELQAL 187
>gi|289743011|gb|ADD20253.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 217
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 152/185 (82%), Gaps = 19/185 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +++P+QKVILCG+YGVGKSSLFRR+ +TF++ + RKSTLGLD+ KEYKV+D+ I+
Sbjct: 1 MAKVRMPKQKVILCGDYGVGKSSLFRRFTNNTFVTDTDRKSTLGLDHIEKEYKVEDKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSCKTG+G+E+MF+DI R L+ +NRS
Sbjct: 121 GNKSDLEGREPEVTDADVEAFCEQCHSLISATYKTSCKTGQGIEDMFSDISRILVDANRS 180
Query: 162 RLELQ 166
+++LQ
Sbjct: 181 KMDLQ 185
>gi|312374802|gb|EFR22284.1| hypothetical protein AND_15496 [Anopheles darlingi]
Length = 301
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 152/194 (78%), Gaps = 22/194 (11%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS+++PEQK+ILCGEYGVGKSSLFRR+A + F++++ RKSTLGLD+F + + V D+ I+
Sbjct: 1 MASVRIPEQKIILCGEYGVGKSSLFRRFATNNFVTTTDRKSTLGLDHFGRTFNVGDKEIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN +SFH LSQH+L++VTYAENAKIFL
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNESSFHALSQHMLDVVTYAENAKIFLV 120
Query: 121 GNN----------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILS 158
GN EQCH+LIS+TYKTSCKTGEG+EEMF DI L+ S
Sbjct: 121 GNKVDVETSGGEPPPVTDADMESFCEQCHSLISATYKTSCKTGEGIEEMFRDIANTLVES 180
Query: 159 NRSRLELQTMGAGG 172
NRSRLELQ + + G
Sbjct: 181 NRSRLELQALESHG 194
>gi|94468782|gb|ABF18240.1| GTPase Rab2 [Aedes aegypti]
Length = 209
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 155/192 (80%), Gaps = 20/192 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++PEQKVILCGEYGVGKSS+FRR+A ++F++++ R+STLGLD++++ + V D++I+
Sbjct: 1 MATVRIPEQKVILCGEYGVGKSSIFRRFATNSFVTATDRQSTLGLDHYDRSFAVGDKAIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAA+LVF+LDN ASFH LSQH+L++VTYAENAKIFL
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAALLVFALDNPASFHSLSQHMLDVVTYAENAKIFLV 120
Query: 121 GNN--------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNR 160
GN EQCH+LIS+TYKTSCKTGEG+EEMF DI L+ SNR
Sbjct: 121 GNKVDMEQTGDPEVSDADMESFCEQCHSLISATYKTSCKTGEGLEEMFQDIANSLVXSNR 180
Query: 161 SRLELQTMGAGG 172
SRLELQ + + G
Sbjct: 181 SRLELQALDSHG 192
>gi|157122984|ref|XP_001653797.1| rab [Aedes aegypti]
gi|108874586|gb|EAT38811.1| AAEL009342-PA [Aedes aegypti]
Length = 208
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 159/205 (77%), Gaps = 20/205 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++PEQKVILCGEYGVGKSS+FRR+A ++F++++ R+STLGLD++++ + V D++I+
Sbjct: 1 MATVRIPEQKVILCGEYGVGKSSIFRRFATNSFVTATDRQSTLGLDHYDRSFAVGDKAIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAA+LVF+LDN ASFH LSQH+L++VTYAENAKIFL
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAALLVFALDNPASFHSLSQHMLDVVTYAENAKIFLV 120
Query: 121 GNN--------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNR 160
GN EQCH+LIS+TYKTSCKTGEG+EEMF DI L+ SNR
Sbjct: 121 GNKVDMEQTGDPEVSDADMESFCEQCHSLISATYKTSCKTGEGLEEMFQDIANSLVESNR 180
Query: 161 SRLELQTMGAGGIGTDSFKLGGRGS 185
SRLELQ + + G + + G S
Sbjct: 181 SRLELQALDSHGFKIEPPEEFGEPS 205
>gi|195012630|ref|XP_001983714.1| GH15417 [Drosophila grimshawi]
gi|193897196|gb|EDV96062.1| GH15417 [Drosophila grimshawi]
Length = 211
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 19/187 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++++P+QKVILCG+YGVGKSSLFRR+ +TFI+ + RKSTLGLD+ ++EY V ++ I+
Sbjct: 1 MATVRIPKQKVILCGDYGVGKSSLFRRFTNNTFITETDRKSTLGLDHIDREYNVGEKQIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAE AILVF+LDNAASFH LSQHLL+IVTYAENAKIF+C
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFIC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCH+LIS+TYKTSC+TG G+E MF DI RQL+ +NRS
Sbjct: 121 GNKSDLEGREPEVSDEEVEAFCEQCHSLISATYKTSCRTGNGIEAMFQDISRQLVQANRS 180
Query: 162 RLELQTM 168
++ELQ +
Sbjct: 181 KMELQEL 187
>gi|170052904|ref|XP_001862433.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
gi|167873655|gb|EDS37038.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
Length = 208
Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 155/192 (80%), Gaps = 20/192 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS+++PEQK+ILCGEYGVGKSSLFRR+A ++F++++ R+STLGLD++++ + V +++I+
Sbjct: 1 MASVRIPEQKIILCGEYGVGKSSLFRRFATNSFVTATDRQSTLGLDHYDRSFAVGEKNIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAA+LVF+LDN ASFH LSQH+L++VTYAENAKIFL
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAALLVFALDNPASFHSLSQHMLDVVTYAENAKIFLV 120
Query: 121 GNN--------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNR 160
GN EQCH+LIS+TYKTSC+TGEG+EEMF DI L+ SNR
Sbjct: 121 GNKVDMEQTGNPEVTEADMESFCEQCHSLISATYKTSCRTGEGIEEMFQDIANTLVDSNR 180
Query: 161 SRLELQTMGAGG 172
SRLELQ + + G
Sbjct: 181 SRLELQALDSHG 192
>gi|357602866|gb|EHJ63542.1| ras-related protein Rab7 [Danaus plexippus]
Length = 207
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 150/187 (80%), Gaps = 19/187 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA +K P KVILCGEYGVGKSS+FRR+ +TF+ +S R+STLGLD+F K + V D+ ++
Sbjct: 1 MAIVKTPVLKVILCGEYGVGKSSIFRRFINNTFLPNSDRRSTLGLDHFEKLFHVGDKDVK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMER+AS+TSSYYK+AEAA+LVFSLDNA+SFHVLSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERIASVTSSYYKYAEAAVLVFSLDNASSFHVLSQHLLDIVTYAENAKIFLC 120
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLISSTYKTSCK+G+G++EMF+DI QL+ SNRS
Sbjct: 121 GNKSDLEGLCPQVTDADIENFCEQCHNLISSTYKTSCKSGKGLDEMFSDIAHQLVESNRS 180
Query: 162 RLELQTM 168
R+ELQ +
Sbjct: 181 RIELQRL 187
>gi|158288136|ref|XP_309994.3| AGAP009325-PA [Anopheles gambiae str. PEST]
gi|157019238|gb|EAA05778.3| AGAP009325-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 152/193 (78%), Gaps = 21/193 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS+++PEQK+ILCGEYGVGKSS+FRR+A + F++++ RKSTLGLD++ + + V D+ I+
Sbjct: 1 MASVRIPEQKIILCGEYGVGKSSIFRRFATNNFVTAADRKSTLGLDHYGRTFTVGDKEIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN +SFH LSQH+L++VTYAENAKIFL
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNESSFHALSQHMLDVVTYAENAKIFLV 120
Query: 121 GNN---------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSN 159
GN EQCH+LIS+TYKTSCKTG+G+EEMF DI L+ SN
Sbjct: 121 GNKVDLESSSTDPPVTDADMESFCEQCHSLISATYKTSCKTGDGLEEMFRDIAGTLVESN 180
Query: 160 RSRLELQTMGAGG 172
RSRLELQ + + G
Sbjct: 181 RSRLELQALESHG 193
>gi|346473225|gb|AEO36457.1| hypothetical protein [Amblyomma maculatum]
gi|427787221|gb|JAA59062.1| Putative rabx6 [Rhipicephalus pulchellus]
Length = 204
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 150/198 (75%), Gaps = 24/198 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K+PEQKVILCGEYGVGKSSLFRR+ +TF++S+ R STLGLD+F+K YKV R ++
Sbjct: 1 MASTKLPEQKVILCGEYGVGKSSLFRRFTTNTFVASNDRSSTLGLDHFDKVYKVAGRDLK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAA+LVFSLDN SF++LSQHLL+IV+YAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAVLVFSLDNPDSFNILSQHLLDIVSYAENAKIFLC 120
Query: 121 GNN------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
GN EQCHNLIS Y+TSCKTG+G+EEMF DI RQL++S R +
Sbjct: 121 GNKVDLVGRIYVSEADIEAFCEQCHNLISGVYRTSCKTGQGIEEMFTDIARQLVMSCRVK 180
Query: 163 LELQTMGAGGIGTDSFKL 180
+ DSFK+
Sbjct: 181 ------DLDDVAKDSFKV 192
>gi|241637011|ref|XP_002410675.1| RAS-related protein, putative [Ixodes scapularis]
gi|215503504|gb|EEC12998.1| RAS-related protein, putative [Ixodes scapularis]
Length = 204
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 149/198 (75%), Gaps = 24/198 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K+PEQKVILCGEYGVGKSSLFRR+ ++F++SS R STLGLD+++K YKV R ++
Sbjct: 1 MASTKLPEQKVILCGEYGVGKSSLFRRFTTNSFVASSDRSSTLGLDHYDKVYKVAGRDLK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVASITSSYYKFAEAA+LVFS DN SF++LSQHLL+IV+YAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASITSSYYKFAEAAVLVFSFDNPDSFNILSQHLLDIVSYAENAKIFLC 120
Query: 121 GNN------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
GN EQCHNLIS Y+TSCKTG+GVEEMF DI RQL++S R +
Sbjct: 121 GNKVDLAGRIYVSEQDIEAFCEQCHNLISGVYRTSCKTGQGVEEMFTDIARQLVMSCRVK 180
Query: 163 LELQTMGAGGIGTDSFKL 180
+ DSFK+
Sbjct: 181 ------DMDDVAKDSFKV 192
>gi|391337935|ref|XP_003743319.1| PREDICTED: ras-related protein Rab-30-like [Metaseiulus
occidentalis]
Length = 206
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 142/179 (79%), Gaps = 17/179 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS ++PEQKVILCGEYGVGKSSLFRR+A +TF++SS R STLGLD+++K YKV R I+
Sbjct: 1 MASTRIPEQKVILCGEYGVGKSSLFRRFAQNTFVASSDRASTLGLDHYDKVYKVIGREIK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVASITSSYYKFAEAAILVFS D+ SF++LSQHLL+IV+YAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASITSSYYKFAEAAILVFSFDSPDSFNILSQHLLDIVSYAENAKIFLC 120
Query: 121 GNN-----------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
GN EQCHN++S Y+TSCKTGEGVEEMF DI + L+ + R R
Sbjct: 121 GNKIDTSTQLVSEADIEAFCEQCHNMVSGVYRTSCKTGEGVEEMFEDIAKHLVHTVRVR 179
>gi|321462889|gb|EFX73909.1| hypothetical protein DAPPUDRAFT_188863 [Daphnia pulex]
Length = 208
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 145/186 (77%), Gaps = 18/186 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M ++K+PEQKVILCGEYGVGKSSLFRR+ + + +++ R+STLGLD+++K Y VD + ++
Sbjct: 1 MTTLKIPEQKVILCGEYGVGKSSLFRRFTSNMYTTATDRQSTLGLDHYSKRYHVDGKDLK 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVASITSSYYKFA+AAILVFSLD+ SF+++SQHLL+IV+YAENAKI+LC
Sbjct: 61 LQLWDTGGMERVASITSSYYKFADAAILVFSLDSPESFNMVSQHLLDIVSYAENAKIYLC 120
Query: 121 GNN------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
GN EQC L++ T+K+SCKTGEGV EMF+ I QL+ SNRS+
Sbjct: 121 GNKSDLKSLIQVTDNDMAAFCEQCQTLVAGTFKSSCKTGEGVNEMFSHIAMQLVESNRSK 180
Query: 163 LELQTM 168
EL+ +
Sbjct: 181 FELEKL 186
>gi|332016891|gb|EGI57700.1| GTP-binding protein ypt7 [Acromyrmex echinatior]
Length = 194
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 139/200 (69%), Gaps = 37/200 (18%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++S+ RKSTLGLDN +KEY ++DR
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVASNDRKSTLGLDNIDKEYVIEDR--- 57
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
R+ S+T YY FAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 58 ----------RIRSVTPIYYNFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAKIFLC 107
Query: 121 GNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRS 161
GN EQCHNLIS YKTSCKTGEGV EMF DI + L+ +NRS
Sbjct: 108 GNKSDLENVAPQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGVNEMFEDIAQHLVEANRS 167
Query: 162 RLELQTMGAGGIGTDSFKLG 181
R+EL M D FK+
Sbjct: 168 RMELHEMDK-----DRFKIS 182
>gi|307192432|gb|EFN75648.1| Ras-related protein Rab-6.2 [Harpegnathos saltator]
Length = 142
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 115/122 (94%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA++KV EQKVILCGEYGVGK+S+FRR+A +TF++S+ RKSTLGLDN +KEY V+DR I+
Sbjct: 1 MATVKVTEQKVILCGEYGVGKTSIFRRFANNTFVASNDRKSTLGLDNIDKEYVVEDRRIR 60
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAKIFLC
Sbjct: 61 LQLWDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAKIFLC 120
Query: 121 GN 122
GN
Sbjct: 121 GN 122
>gi|339249968|ref|XP_003373969.1| Ras-related protein ARA-5 [Trichinella spiralis]
gi|316969796|gb|EFV53841.1| Ras-related protein ARA-5 [Trichinella spiralis]
Length = 528
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 115/175 (65%), Gaps = 29/175 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++LCG+YGVGKSSLFRR+ +DTF+ SS RK TLG D+F K Y +DD+ + +QLWDTGG+
Sbjct: 11 KLVLCGDYGVGKSSLFRRFVFDTFVESSDRKCTLGFDHFEKTYPIDDKCVTLQLWDTGGL 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ERVA++TSSY+KF+ +LVF+ D+ S + LSQHL+E +T AE A+ FLCGN
Sbjct: 71 ERVATVTSSYFKFSNGVLLVFAYDDMDSLNDLSQHLVEALTCAEQARYFLCGNKADLYNE 130
Query: 123 ------NEQ-----CH-----------NLISSTYKTSCKTGEGVEEMFADIGRQL 155
NE+ C NL S YK SCKT E V+EMF DI RQL
Sbjct: 131 HNGYGPNEENVNLFCQQSSVGGVGGGSNLFSRVYKVSCKTNENVDEMFKDIARQL 185
>gi|328779547|ref|XP_001121655.2| PREDICTED: ras-related protein Rab-4A [Apis mellifera]
Length = 154
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 99/144 (68%), Gaps = 24/144 (16%)
Query: 57 RSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK 116
R + DTGGMERVAS+TSSYYKFAEAAILVF+LDN+ SFH+LSQHLL+IVTYAENAK
Sbjct: 4 RRLICNYRDTGGMERVASVTSSYYKFAEAAILVFALDNSTSFHLLSQHLLDIVTYAENAK 63
Query: 117 IFLCGNN-------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLIL 157
IFLCGN EQCHNLIS YKTSCKTGEG+ EMF DI + L+
Sbjct: 64 IFLCGNKSDLESSSPQVTDAEMEQFCEQCHNLISGIYKTSCKTGEGIHEMFEDIAQHLVE 123
Query: 158 SNRSRLELQTMGAGGIGTDSFKLG 181
+NRSR+EL M D FK+
Sbjct: 124 ANRSRMELHEM-----DKDRFKIS 142
>gi|405971474|gb|EKC36309.1| Ras-related protein Rab-12 [Crassostrea gigas]
Length = 225
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 107/167 (64%), Gaps = 18/167 (10%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
P K+ILCGEYGVGKSS+FRR+ DTF + +KST+GLD + + ++ +++ LWDT
Sbjct: 25 PNYKIILCGEYGVGKSSIFRRFMNDTFTMETGKKSTIGLDQSARGFNINGTDVKLTLWDT 84
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---- 122
GGMER++ I SSYY+ A AA+L +S+ N +F +LSQ++L+IV AE AKIFLCGN
Sbjct: 85 GGMERMSFIGSSYYRGAHAALLCYSVKNKDTFTILSQYILDIVMNAEGAKIFLCGNMADC 144
Query: 123 --------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+C +++S YK SCK GV +MF D+ R L
Sbjct: 145 EGENQVTDADIENFERECGDVLSGMYKISCKDNSGVFDMFKDMARVL 191
>gi|443683018|gb|ELT87407.1| hypothetical protein CAPTEDRAFT_171398 [Capitella teleta]
Length = 201
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 17/170 (10%)
Query: 3 SIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD-RSIQM 61
++ +P KVILCGEYGVGKSS+FRR+ ++F + KST+GLD+F+KE+ + +++
Sbjct: 2 AVGMPTHKVILCGEYGVGKSSIFRRFLDNSFTEDTGPKSTIGLDHFSKEFTTSSGKKLRL 61
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG 121
LWDT G+ER A+++SSYY+ A AAIL +S+ N SF++LSQHLLE KI LCG
Sbjct: 62 VLWDTAGIERFATLSSSYYQSASAAILCYSIANRDSFNMLSQHLLETAMNMRTGKIILCG 121
Query: 122 NNE----------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
N + QC ++IS ++ SCK G+GV E+F I L
Sbjct: 122 NKQDLESAVSEEDVVDFCNQCDSVISKVFRISCKEGDGVRELFHAIAEVL 171
>gi|156372577|ref|XP_001629113.1| predicted protein [Nematostella vectensis]
gi|156216106|gb|EDO37050.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 3 SIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
S +P K++L G+ GVGK+S+F RY + F S R S+ G+D KE VDD+ ++
Sbjct: 8 SPAIPLYKIVLVGDTGVGKTSIFLRYERNYF--SRHRTSSFGVDKCTKEISVDDQLCKLN 65
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN 122
+WDT G+ER S+TS YY A++ I V+S+++ AS L + + YA NAK FL GN
Sbjct: 66 IWDTAGLERTGSLTSHYYHLAQSIIFVYSVESLASLTALHHWIQDAEQYAPNAKKFLAGN 125
Query: 123 NEQCHNLISSTYK-----------------TSCKTGEGVEEMFADIGRQLILSN 159
Y+ S +G+GV EMF I R L+ N
Sbjct: 126 KNDLDKDDWEVYEGILQRFMDNKEFALKFDISALSGDGVCEMFKSISRHLLQRN 179
>gi|340372433|ref|XP_003384748.1| PREDICTED: ras-related protein Rab-18-like [Amphimedon
queenslandica]
Length = 206
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
P KV+L GE GVGK+SLFRR + F S+ ST G+D+ K +KVD SI M +WDT
Sbjct: 9 PTYKVVLLGELGVGKTSLFRRIKENIFDEFST--STQGIDSCTKVFKVDGESITMSIWDT 66
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQC 126
G+ER ++T +YY+ A AA+ ++S+ + +S H L+Q + +A NA L GN
Sbjct: 67 AGVERFRTLTRNYYRNAHAAVFIYSVTDVSSLHFLTQWEKDTQNFAPNAIRMLIGNKSDL 126
Query: 127 HNLISS----------TYK----TSCKTGEGVEEMFADIGRQL 155
+ T+ SCKTG+G+ E F + + L
Sbjct: 127 EAEVDDYTAEQFAKMHTFDRDAVISCKTGKGIHEAFEGLAKLL 169
>gi|89258451|gb|ABD65449.1| Rab-like3 [Suberites domuncula]
Length = 212
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 97/182 (53%), Gaps = 23/182 (12%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
A + P KV+L GE GVGK+SLFRR ++F + +T G+D+ +K K+D ++ +
Sbjct: 4 APSRGPTYKVVLLGELGVGKTSLFRRLKDNSF--DEYQTATTGIDSCSKVVKIDGSTVML 61
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG 121
+WDT G+ER ++T +YY+ A AA+ V+S+ +A+S H L+Q + + +A +A L G
Sbjct: 62 SIWDTAGVERFRTLTRNYYRNAHAAVFVYSVSDASSLHYLAQWIKDAQNFAPSATRMLLG 121
Query: 122 NN---EQCHNLISSTYK--------------TSCKTGEGVEEMFADIGRQL----ILSNR 160
N E I +T SCKT G+ + F + R L +SN+
Sbjct: 122 NKVDIEPPQAEIDATTSKSFAAAHEFELSSLVSCKTNTGIADAFESLARALHTSPAVSNQ 181
Query: 161 SR 162
R
Sbjct: 182 QR 183
>gi|291236558|ref|XP_002738206.1| PREDICTED: Rab-like3-like [Saccoglossus kowalevskii]
Length = 202
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 22/163 (13%)
Query: 10 KVILCGEYGVGKSSLFRRY---AYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
KVIL GE GVGK+SLFRR Y+ I+ +S G+D K+++VD I++ +WDT
Sbjct: 10 KVILLGELGVGKTSLFRRLRDNVYEETIAVAS-----GIDCCFKKFEVDGEQIKLNIWDT 64
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---- 122
G+ER ++T +YY+ A AAI V++LD+ +S LSQ + + YA+ A + G
Sbjct: 65 AGVERFRTLTKNYYRGAHAAIFVYALDDPSSIQYLSQWVRDANDYADEATRIMIGTKLDT 124
Query: 123 ----------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
N + I + S KTGEGVE+ F +I R L
Sbjct: 125 AVLVDTDTVKNFAATHCIDHMFTISAKTGEGVEDCFVEISRLL 167
>gi|158343291|gb|ABW35318.1| RAB1-like [Gymnochlora stellata]
gi|193875834|gb|ACF24553.1| Ras-related small GTPase Rab 1 [Gymnochlora stellata]
Length = 212
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 18/155 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGK++L R+A D F +ST+G+D K K+D++ ++MQ+WDT G
Sbjct: 15 KLVMVGDSGVGKTALAHRFAQDKF--EKLDRSTIGVDLRIKTLKLDEKKVKMQVWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +IT YY+ A+A +LVF N S+ LS+ + +I +A +NAKI +C N
Sbjct: 73 ERFRAITQCYYRGADAVVLVFDQTNINSYKNLSRWISDIAYFAKKNAKIVVCANKADIAE 132
Query: 124 ---EQCHNLIS-------STYKTSCKTGEGVEEMF 148
+ +++S +TS KTG+GV+E F
Sbjct: 133 EDAPEAKDILSLFEGNDVHVIETSAKTGKGVKEAF 167
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 20/184 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D K +++D+ I++Q+WDT G
Sbjct: 10 KILLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A+ I+V+ + + SF+ + ++EI YA E+ + L GN N
Sbjct: 68 ERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKN 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ +Y +TS K VE+ F + + + N+S+LE Q G I
Sbjct: 128 DRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHE--IKNKSQLENQQKGRANI 185
Query: 174 GTDS 177
++
Sbjct: 186 NLNA 189
>gi|145519165|ref|XP_001445449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833780|emb|CAI39355.1| rab_A55 [Paramecium tetraurelia]
gi|124412904|emb|CAK78052.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKS+L R+A DTF S + +T+G+D K KVD++ +++Q+WDT G
Sbjct: 11 KLVIIGNSGVGKSALLLRFADDTF--SENYITTIGVDFRFKTLKVDNKGLKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGN----- 122
ER +IT++YYK A+A ++V+ SF + + L EI +YAE NA++ L GN
Sbjct: 69 ERFRTITNAYYKGADAIVIVYDTTCQQSFDDIEKFWLNEIESYAEKNAELLLLGNKSDLS 128
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
E + ++TS KT +GVEE F +I +L+
Sbjct: 129 TKQVSSERVQEYAQKRNMTFFETSAKTADGVEEAFKNIAIKLM 171
>gi|313235522|emb|CBY10977.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 15/177 (8%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M++ P KVIL G+ GVGKSSL RY + F S + T+G+D F K V+ +
Sbjct: 1 MSNRPNPILKVILLGDSGVGKSSLINRYVNEKF--SENNMQTIGVDLFTKIADVEGAKVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+Q+WDTGG ER ++ + +Y+ A+ A+LV+S D+ S L+ E +A NA I +
Sbjct: 59 LQIWDTGGQERFRALRTPFYRGADCAVLVYSKDSLQSVDNLNHWRSEFEKHAGNAPILVA 118
Query: 121 GNNEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
N + N+ S +K S KT GV ++F R + + RLE
Sbjct: 119 MNKSEIENVPSPNGGFQIAEEEGIQHFKVSAKTSHGVNDLFEAAARIGVPTAVERLE 175
>gi|145527983|ref|XP_001449791.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833702|emb|CAI39328.1| rab_B55 [Paramecium tetraurelia]
gi|124417380|emb|CAK82394.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 22/173 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKS+L R+A DTF S + +T+G+D K KVD++ +++Q+WDT G
Sbjct: 11 KLVIIGNSGVGKSALLLRFADDTF--SENYITTIGVDFRFKTLKVDNKGLKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNE--- 124
ER +IT++YYK A+A ++V+ SF + + L EI +YAE NA++ L GN
Sbjct: 69 ERFRTITNAYYKGADAIVIVYDTTCQQSFDDIEKFWLNEIESYAEKNAELLLLGNKSDLS 128
Query: 125 -------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
Q N++ ++TS KT +GVEE F I +L+ +++
Sbjct: 129 TKQVQSERVQEYAQKRNMM--FFETSAKTADGVEEAFKKIAIKLMAKRNQQVQ 179
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 20/184 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D K +++D+ I++Q+WDT G
Sbjct: 10 KILLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A+ I+V+ + + SF+ + ++EI YA E+ + L GN N
Sbjct: 68 ERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKVLIGNKIDLKN 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ +Y +TS K VE+ F + + + N+S+LE Q G I
Sbjct: 128 DRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHE--IKNKSQLENQQKGRVNI 185
Query: 174 GTDS 177
++
Sbjct: 186 NLNA 189
>gi|195050245|ref|XP_001992853.1| GH13416 [Drosophila grimshawi]
gi|193899912|gb|EDV98778.1| GH13416 [Drosophila grimshawi]
Length = 226
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 29/195 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR----------L 163
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSAAAAAAA 185
Query: 164 ELQTMGAGGIGTDSF 178
+ Q+ G+G IG SF
Sbjct: 186 QRQSEGSGSIGLGSF 200
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVMVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LVF ++NA SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VEE F I R ++
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|306476399|gb|ADM89081.1| Lea/Rab family small GTPase [Hyriopsis cumingii]
Length = 221
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
P+ K +L G+ GVGKSSLF R D F +ST+G+++ K VD I Q+WDT
Sbjct: 17 PKFKAVLLGDVGVGKSSLFLRIKDDVF--DERLQSTVGIESCLKSLYVDRAEISFQIWDT 74
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---- 122
G+E+ S++ SYY+ + +LV+S+ ++ S L++ + + ++ NA FL GN
Sbjct: 75 AGVEKFQSLSRSYYRNTQVVLLVYSVHDSTSLQRLTKWIKDTEDHSPNAMKFLIGNKCDQ 134
Query: 123 -----NEQCHNLISS-----TYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
++ HN ++ + TS KTGEG+++ I QL+ S + +++ A
Sbjct: 135 EKSVSDQSAHNFAATHECADVFLTSAKTGEGIDQALVKITEQLLNSYQRPFMMESPFACD 194
Query: 173 I 173
I
Sbjct: 195 I 195
>gi|145501011|ref|XP_001436488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403628|emb|CAK69091.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ +LV+ + + A+F + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDVSSLATFEDIDKFWINEVDSYAEKNVELLLLGNKSDIE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ +T K S KT + V + F + R+LI S+
Sbjct: 128 EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKDSQ 176
>gi|74833846|emb|CAI39376.1| rab_A02 [Paramecium tetraurelia]
Length = 201
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ +LV+ + + A+F + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDVSSLATFEDIDKFWINEVDSYAEKNVELLLLGNKSDIE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ +T K S KT + V + F + R+LI S+
Sbjct: 128 EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKDSQ 176
>gi|145531481|ref|XP_001451507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834559|emb|CAI44582.1| rab_A01 [Paramecium tetraurelia]
gi|124419162|emb|CAK84110.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 18/171 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL RY DTF S + ST+G+D K +++D + +++Q+WDT G
Sbjct: 11 KLVIIGNSGVGKSSLLVRYTDDTF--SENYISTIGVDFKFKTFRLDGKGLKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYA-ENAKIFLCGNNEQCH 127
ER +IT++YYK A+A ++V+ +SF + + + EI +A +N + L GN
Sbjct: 69 ERFRTITNAYYKGADAIVIVYDTTCQSSFEEIEKSWIDEIHKHAGKNTTVLLIGNKSDLP 128
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
N T Y+TS KT GV + F ++ R LI+ +LE
Sbjct: 129 NKAVITERAQTYAKEKLMLFYETSAKTSHGVSQAFEELSRLLIIKRNMKLE 179
>gi|378756664|gb|EHY66688.1| rab-protein 10 [Nematocida sp. 1 ERTm2]
Length = 208
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 24/169 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGK+S+ +R+ + F + S +T+G+D +K KVD + I++Q+WDT G
Sbjct: 9 KLLIIGESNVGKTSILQRFIDNKFEKTFS--TTIGIDFRSKAIKVDGKEIELQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER SIT SYY+ ++ L F L + +SF L++ + EI E +FL GN
Sbjct: 67 ERFFSITRSYYRGSDGIFLTFDLTSESSFASLTKWIGEIKEKVDEKVPVFLLGNKKDLLK 126
Query: 123 -NEQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+E NL+++ Y TS K+GE +EE+F D+ R ++
Sbjct: 127 GSESEINLLATVNRIKEISEELKVPWYSTSAKSGENIEEIFMDMARTIL 175
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens]
Length = 204
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S ST+G+D + KVD +++++Q+WDT G
Sbjct: 11 KLVLIGDTGVGKSCLLLRFADDAF--TESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+V+ + ++ SF +S L E+ YA E L GN +
Sbjct: 69 ERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMED 128
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ +T +TS K VEE F + +LI R R Q+ G G
Sbjct: 129 KVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELI---RLREASQSAKPGAGG 185
Query: 175 TDSFKLGG 182
KL G
Sbjct: 186 ASGLKLSG 193
>gi|145481547|ref|XP_001426796.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834511|emb|CAI44568.1| rab_A29 [Paramecium tetraurelia]
gi|124393873|emb|CAK59398.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ ++V+ + + ASF + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVMVYDVSSLASFEDIDRFWINEVDSYAEKNVELLLLGNKSDIE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ +T K S KT + V + F + ++LI+ S+
Sbjct: 128 DKAVTTQKALDYAAIRKMGHMEASAKTADQVSKAFIQLAKKLIVKKDSQ 176
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVMVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LVF ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +L
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|74833762|emb|CAI39350.1| rab_B02 [Paramecium tetraurelia]
Length = 201
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ +LV+ + + A+F + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDVCSLATFEDIDKFWINEVDSYAEKNVELLLLGNKSDIE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ +T K S KT + V + F + R+LI S+
Sbjct: 128 EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKDSQ 176
>gi|145493258|ref|XP_001432625.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399738|emb|CAK65228.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ +LV+ + + A+F + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDVCSLATFEDIDKFWINEVDSYAEKNVELLLLGNKSDIE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ +T K S KT + V + F + R+LI S+
Sbjct: 128 EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKDSQ 176
>gi|291243570|ref|XP_002741677.1| PREDICTED: RabX6-like [Saccoglossus kowalevskii]
Length = 238
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 30/186 (16%)
Query: 6 VPEQ------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD-RS 58
VP+Q KVIL G+ GVGK+ LFRR+ ++F S++ + + +F + ++ +
Sbjct: 21 VPDQIRLRTHKVILLGDAGVGKTCLFRRFMGESFPKSTA-TTLMTQASFPRRFQDGQGQP 79
Query: 59 IQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFH-VLSQHLLEIVTYAENAKI 117
+++ +WDT G ER+ SIT +YY+ AA++V+ +DNA + ++S I + +NAK+
Sbjct: 80 VEVDIWDTAGAERMRSITETYYRQTSAALMVYDIDNAETLDSIVSHWAFSIQSREQNAKL 139
Query: 118 FLCGNN---------------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
FL GN E I ++ S K+ GVEEMF I + L
Sbjct: 140 FLVGNKLDLVDEGDGEDTILQAEKYTVESQDVEIEQHFQVSAKSDAGVEEMFHKIAKFLD 199
Query: 157 LSNRSR 162
+ NR +
Sbjct: 200 MKNRGK 205
>gi|167391375|ref|XP_001739748.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896450|gb|EDR23858.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 190
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL GE GVGK+SL +RY + F S+ K+T+G D K V+++ +Q+WDT G
Sbjct: 3 KLILIGESGVGKTSLIQRYVMNKF--DSTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--VTYAENAKIFLCGNNEQCH 127
E+ +S+ SS+Y+ ++ AI+VF + N +SF + + E ++ I +CGN C
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWINEYSRALNGKDVPIIICGNKVDCQ 120
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ ST +TS T +GV ++F ++ + +I
Sbjct: 121 PRLVSTESARQWCEGRNYSYIETSAATAQGVNDLFMEVVKVII 163
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEA 127
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ T +TS K VE+ F + Q+ +SR++ Q GA
Sbjct: 128 KRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQI----KSRMKSQPTGAPRG 183
Query: 174 GT 175
GT
Sbjct: 184 GT 185
>gi|429329505|gb|AFZ81264.1| Ras related Rab1a small GTP-binding protein [Babesia equi]
Length = 200
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 92/163 (56%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+F + S +T+G+D + KV+D+ +++Q+WDT G
Sbjct: 14 KLVLVGDSGVGKSCLLLRFADDSF--TDSYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN---EQ 125
ER +ITS+YY+ A+ +L + L + +SF +S L E+ Y AE+ L GN ++
Sbjct: 72 ERFRTITSTYYRGADGIVLAYDLTDKSSFDHISDWLAEVDKYAAEDTCKLLVGNKSDIQE 131
Query: 126 CHNLISSTYK------------TSCKTGEGVEEMFADIGRQLI 156
++ S K S KTGE VE+ F I +L+
Sbjct: 132 NRDVDPSDVKRLSELVNIPVMEVSAKTGENVEKAFFSITERLV 174
>gi|32492048|gb|AAP85296.1| Rab1a [Babesia bovis]
Length = 214
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 18/164 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS + R+A DTF + S +T+G+D + +V+ R +++Q+WDT G
Sbjct: 14 KLVLIGDSGVGKSCVLLRFADDTF--TDSYITTIGVDFRFRTIEVEGRRVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA--KIFLCGNNEQCH 127
ER +ITS+YY+ A+A I+VF + + SF + L E+ +A + K+ + ++Q
Sbjct: 72 ERFRTITSAYYRGADAIIIVFDITDKLSFENVPSWLQEVEKFAPDGIHKLLIGNKSDQAQ 131
Query: 128 -------------NLISSTY-KTSCKTGEGVEEMFADIGRQLIL 157
L S+ Y + S K+G VEE F + R+L++
Sbjct: 132 ARDVDPSEIQEFSELHSTPYVEISAKSGSNVEEAFVSVARRLVI 175
>gi|367024323|ref|XP_003661446.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
gi|347008714|gb|AEO56201.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++NA SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +L
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|156088917|ref|XP_001611865.1| Rab1a [Babesia bovis]
gi|154799119|gb|EDO08297.1| Rab1a [Babesia bovis]
Length = 213
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS + R+A DTF + S +T+G+D + +V+ R +++Q+WDT G
Sbjct: 14 KLVLIGDSGVGKSCVLLRFADDTF--TDSYITTIGVDFRFRTIEVEGRRVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA--KIFLCGNNEQCH 127
ER +ITS+YY+ A+A I+VF + + SF + L E+ +A + K+ + ++Q
Sbjct: 72 ERFRTITSAYYRGADAIIIVFDITDKLSFENVPSWLQEVEKFAPDGIHKLLIGNKSDQAQ 131
Query: 128 -------------NLISSTY-KTSCKTGEGVEEMFADIGRQLILSNRSR 162
L S+ Y + S K+G VEE F + R+L++ +
Sbjct: 132 ARDVDPSEIQEFSELHSTPYVEISAKSGSNVEEAFVSVARRLVIDRHGK 180
>gi|403358572|gb|EJY78942.1| Ras family GTPase putative [Oxytricha trifallax]
Length = 223
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 33/212 (15%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
K+ K+++ GE VGK+SL R++ TF + + ST+ K+ V+++SI++ +W
Sbjct: 4 KISPAKIVVLGEARVGKTSLTYRFSSGTF--NEHQPSTVDATCIEKKINVNEKSIKLVIW 61
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN 123
DT G ER ++ YY+ AE AI+V+ + SF ++Q + E+ Y I + GN
Sbjct: 62 DTAGQERYNALNQVYYRGAEGAIVVYDATDLDSFKKMNQWVTELRNYLPAEVPILVAGNK 121
Query: 124 EQCHNLI---------------SSTYKTSCKTGEGVEEMFADIGRQLI---LSNRSRLEL 165
+N I S + TS KTG GV+E+F ++ +++I LS + +EL
Sbjct: 122 SDLYNNIAISEDQARTYAKSHNSQYFATSAKTGNGVQELFMELAKRIIQNQLSGAATIEL 181
Query: 166 -----QTMGAGGI-GTDSF------KLGGRGS 185
T GA + G DSF KL GR S
Sbjct: 182 PTKIGNTRGALKVDGLDSFNPNANLKLDGRRS 213
>gi|340376610|ref|XP_003386825.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF S+ ++T+G+D K +DDR++++QLWDT G
Sbjct: 11 KIVFLGEEAVGKTSIITRFMYDTF--DSNYQATIGIDFLAKTMYLDDRTVRLQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER ++ +Y + + AI+V+ + N+ASF + Q + ++ ++ I L GN +
Sbjct: 69 ERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKLDLED 128
Query: 129 LISSTYK--------------TSCKTGEGVEEMF 148
+ ST K TS K+G ++++F
Sbjct: 129 RVISTEKGESKAKELNVIFVETSAKSGANIKQLF 162
>gi|145484934|ref|XP_001428476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834397|emb|CAI44534.1| rab_B29 [Paramecium tetraurelia]
gi|124395562|emb|CAK61078.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 18/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ DTF S S +T+G+D K ++D + +++Q+WDT G
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTF--SDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ ++V+ + + SF + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVMVYDVTSTGSFEDIDRFWINEVESYAEKNVELLLLGNKSDVE 127
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ ST K S KT + V + F + ++LI S+
Sbjct: 128 DKAVSTQKALDYAAIKRMAHMEVSAKTADQVSKAFISLAKKLIAKKDSQ 176
>gi|189199544|ref|XP_001936109.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330921971|ref|XP_003299638.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
gi|187983208|gb|EDU48696.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326561|gb|EFQ92235.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 24/178 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +ISS ++TS K VE+ F I RQ +
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQAL 176
>gi|451851944|gb|EMD65242.1| hypothetical protein COCSADRAFT_36566 [Cochliobolus sativus ND90Pr]
gi|451995245|gb|EMD87713.1| hypothetical protein COCHEDRAFT_1023128 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 24/178 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +ISS ++TS K VE+ F I RQ +
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMAFCQSKGGIPYFETSAKEAINVEQAFEVIARQAL 176
>gi|169613615|ref|XP_001800224.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 24/178 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +ISS ++TS K VE+ F I RQ +
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQAL 176
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 24/178 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +ISS ++TS K VE+ F I RQ +
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEDAFEVIARQAL 176
>gi|67482255|ref|XP_656477.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978614|dbj|BAD34974.1| EhRab7G protein [Entamoeba histolytica]
gi|56473678|gb|EAL51093.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708325|gb|EMD47807.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 190
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL GE GVGK+SL +RY + F + K+T+G D K V+++ +Q+WDT G
Sbjct: 3 KLILIGESGVGKTSLIQRYVMNKF--EPTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--VTYAENAKIFLCGNNEQCH 127
E+ +S+ SS+Y+ ++ AI+VF + N +SF + + E ++ I +CGN C
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEYSRALNGKDVPIIICGNKVDCQ 120
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ ST +TS T +GV ++F ++ + +I
Sbjct: 121 PRLVSTESARQWCEGRNYSYIETSAATAQGVNDLFMEVVKVII 163
>gi|171692347|ref|XP_001911098.1| hypothetical protein [Podospora anserina S mat+]
gi|170946122|emb|CAP72923.1| unnamed protein product [Podospora anserina S mat+]
Length = 205
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +L
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|429964349|gb|ELA46347.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 202
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ GE VGK+S+ RR+ D F +S ST+G+D K KVDD +++ +WDT G
Sbjct: 11 KIIILGESYVGKTSIARRFVNDEF--DTSLFSTIGIDLLKKIVKVDDTEVKLDIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA-KIFLCGNN----- 123
ER SIT SYY+ A+ ILVF L + SF + + I T + + IFL GN
Sbjct: 69 ERFHSITKSYYRSADGIILVFDLLDLKSFDCIDRWFEGIYTETDRSVPIFLVGNKYDEAE 128
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E+ N+ + TS K G +E +F+ + +L
Sbjct: 129 HKKDFVLDVFEEKARNMNVEFFVTSAKNGLNIELLFSRMAEEL 171
>gi|387594435|gb|EIJ89459.1| small GTP binding protein RAB8 [Nematocida parisii ERTm3]
gi|387596723|gb|EIJ94344.1| small GTP binding protein RAB8 [Nematocida parisii ERTm1]
Length = 207
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGK+S+ +R+ D F + S +T+G+D +K ++ + I++Q+WDT G
Sbjct: 9 KLLIIGESNVGKTSILQRFIEDKFEKTFS--TTIGIDFRSKNININGKEIELQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER SIT SYY+ ++ L F L + SF LS+ + EI EN +FL GN
Sbjct: 67 ERFFSITRSYYRGSDGIFLTFDLTSEGSFASLSKWINEIKEKVNENVPVFLLGNKKDLLK 126
Query: 123 ---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNR 160
E L Y TS K+GE +EE+F D+ +I + +
Sbjct: 127 GKEFETTEISTIKKIKEISEELKVPWYGTSAKSGENIEEIFMDMAYTIIQNKK 179
>gi|66504348|ref|XP_395496.2| PREDICTED: ras-related protein Rab-30-like isoform 1 [Apis
mellifera]
gi|380026166|ref|XP_003696829.1| PREDICTED: ras-related protein Rab-30-like [Apis florea]
gi|383851999|ref|XP_003701518.1| PREDICTED: ras-related protein Rab-30-like [Megachile rotundata]
Length = 205
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
T+ +TS K E VE +F +I +L+ RS+
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|307207011|gb|EFN84834.1| Ras-related protein Rab-30 [Harpegnathos saltator]
Length = 205
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
T+ +TS K E VE +F +I +L+ RS+
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 22/173 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIEQDQKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + +A SF+ + Q L EI Y AEN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYAAENVNKLLVGNKSDLTA 127
Query: 123 -----NEQCHNLISST----YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
EQ S +TS KT VE+ F + Q+ ++R++ Q
Sbjct: 128 KRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQI----KARMKTQ 176
>gi|340710437|ref|XP_003393796.1| PREDICTED: ras-related protein Rab-30-like [Bombus terrestris]
gi|350427307|ref|XP_003494717.1| PREDICTED: ras-related protein Rab-30-like [Bombus impatiens]
Length = 205
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
T+ +TS K E VE +F +I +L+ RS+
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|322796096|gb|EFZ18672.1| hypothetical protein SINV_00440 [Solenopsis invicta]
Length = 205
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
T+ +TS K E VE +F +I +L+ RS+
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 27/183 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SFH + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQWLQEIDRYACENVNKLLVGNKCDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + + + NR MG G +
Sbjct: 131 KKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAE--IKNR-------MGPGSM 181
Query: 174 GTD 176
D
Sbjct: 182 PQD 184
>gi|340386562|ref|XP_003391777.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF S+ ++T+G+D K +DDR +++QLWDT G
Sbjct: 11 KIVFLGEEAVGKTSIITRFMYDTF--DSNYQATIGIDFLAKTMYLDDRMVRLQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER ++ +Y + + AI+V+ + N+ASF + Q + ++ ++ I L GN +
Sbjct: 69 ERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKLDLED 128
Query: 129 LISSTYK--------------TSCKTGEGVEEMF 148
+ ST K TS K+G ++++F
Sbjct: 129 RVISTEKGESKAKELNVIFVETSAKSGANIKQLF 162
>gi|167385628|ref|XP_001737422.1| small GTPase rabd [Entamoeba dispar SAW760]
gi|165899770|gb|EDR26291.1| small GTPase rabd, putative [Entamoeba dispar SAW760]
Length = 287
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 16/161 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ GE VGK+ RY + F + K+T+G+ +KE +VD + +++Q+WDT G
Sbjct: 102 KVIMVGESSVGKTCCMNRYVSNEF--AEQTKATIGVGVGSKELEVDGKCVKLQIWDTAGQ 159
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER A++T +Y++ A A I++F + N SF +S + + Y IFL GN N
Sbjct: 160 ERFATLTGNYFRNAMATIIMFDVSNKESFENVSNWVEQCCKYNGKHIIFLAGNKIDLENR 219
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ S ++ S KTG+G+E++F ++ ++++
Sbjct: 220 VVSKEEAEEKAKELELKYFEVSAKTGDGLEDLFNELIKEVM 260
>gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
gi|119402656|gb|EAW13077.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
Length = 205
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|118356223|ref|XP_001011370.1| Ras family protein [Tetrahymena thermophila]
gi|89293137|gb|EAR91125.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777752|dbj|BAJ21272.1| Rab-family small GTPase Rab1E [Tetrahymena thermophila]
Length = 250
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G VGKSS+ R++ D F S S +T+G+D K +D R +++Q+WDT G
Sbjct: 11 KLVIIGNSSVGKSSVLLRFSDDQF--SESYLTTIGVDFRFKTLNIDGRKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +IT++YYK A+ +LV+ + N+ SF + + L E+ +YAE + ++ L GN
Sbjct: 69 ERFRTITNAYYKGADGIVLVYDITNSTSFEDIERFWLNEVESYAEKDVELLLLGNKSDLS 128
Query: 128 -------NLISST--------YKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
N++S Y+TS KT + +E+ F I ++L+ ++L
Sbjct: 129 DQRQVETNMVSEYAEKKHMDFYETSAKTSDQIEQAFLSISKRLMSKKDAKL 179
>gi|407922523|gb|EKG15620.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 205
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 24/178 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS + KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRRKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++NA SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +IS+ ++TS K VE+ F I RQ +
Sbjct: 119 PFVVIGNKIDVEESKRMISTKRAMAFCNSKGGIPYFETSAKEAINVEQAFEVIARQAL 176
>gi|440640707|gb|ELR10626.1| Ras-like protein Rab7 [Geomyces destructans 20631-21]
Length = 205
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEENKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|145532455|ref|XP_001451983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834449|emb|CAI44549.1| rab_B01 [Paramecium tetraurelia]
gi|124419660|emb|CAK84586.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL RYA D F S + ST+G+D K +++D + +++Q+WDT G
Sbjct: 11 KLVIIGNSGVGKSSLLIRYADDKF--SENYISTIGVDFKFKTFQLDGKGLKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYA-ENAKIFLCGNNEQCH 127
ER +IT+SYYK A+A +LV+ SF + + L EI +A N I L GN
Sbjct: 69 ERFRTITNSYYKGADAIVLVYDTTCLQSFEEIEKSWLDEIYKHAGRNTTILLIGNKSDLP 128
Query: 128 NLISSTYK--------------TSCKTGEGVEEMFADIGRQLILSNRSRLE 164
N ST + S KT GV + F ++ R LI+ +E
Sbjct: 129 NKTVSTERAQVYAKEKLMLFKEASAKTSLGVNQAFEELSRLLIIKKNLEVE 179
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D K +++D+ I++Q+WDT G
Sbjct: 10 KILLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A+ I+V+ + + SF+ + ++EI YA E+ + L GN N
Sbjct: 68 ERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKN 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ +Y +TS K VE+ F + + + N+S+ E G I
Sbjct: 128 DRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYE--IKNKSQHETINKGKTNI 185
Query: 174 GTDS 177
++
Sbjct: 186 NLNA 189
>gi|195116811|ref|XP_002002945.1| GI17653 [Drosophila mojavensis]
gi|193913520|gb|EDW12387.1| GI17653 [Drosophila mojavensis]
Length = 230
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|59802950|gb|AAX07679.1| ras-related protein-like protein [Magnaporthe grisea]
Length = 205
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER+ S+ ++Y+ A+ +LVF ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERIQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|328716995|ref|XP_001945306.2| PREDICTED: ras-related protein Rab-30-like [Acyrthosiphon pisum]
Length = 201
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 30/185 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++D+ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGMF--PPGQGATIGVDFMIKTIEIDNEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL++ + + +F L+ L EI YA N + L GN
Sbjct: 67 ERFRSITQSYYRSAHALILIYDITSQPTFDCLNDWLREIDEYANNRVLRVLVGNKIDKED 126
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
Q H++ +TS K + VE++F I +L+ +S+ G
Sbjct: 127 REIPSHVGQDFAQRHDM--RYLETSAKQADNVEKLFVQIASELMEQAKSK---------G 175
Query: 173 IGTDS 177
I +DS
Sbjct: 176 ISSDS 180
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + + EI YA EN L GN +
Sbjct: 73 ERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKSDLTS 132
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
TY +TS K VE+ F ++ R + ++ + GAGG
Sbjct: 133 KKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSRSGAGG 191
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 24/190 (12%)
Query: 1 MASIKVPEQ------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKV 54
MA+ VP++ K++L G+ GVGK+ + RYA DTF +++ ST+G+D K ++
Sbjct: 1 MAAQAVPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTF--NTTFISTIGIDFKIKTIEL 58
Query: 55 DDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE- 113
+ + I++Q+WDT G ER +IT+SYY+ A ILV+ + N SF +++ L I +A
Sbjct: 59 EGKRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASA 118
Query: 114 NAKIFLCGN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILS 158
+ + L GN N HN S +TS KT +EE F + +Q++
Sbjct: 119 DVERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRK 178
Query: 159 NRSRLELQTM 168
++ E +T+
Sbjct: 179 VPAKKEDETV 188
>gi|195155755|ref|XP_002018766.1| GL25775 [Drosophila persimilis]
gi|194114919|gb|EDW36962.1| GL25775 [Drosophila persimilis]
Length = 232
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|66772349|gb|AAY55486.1| IP08619p [Drosophila melanogaster]
Length = 433
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 30/182 (16%)
Query: 1 MASIKVPEQ--------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEY 52
++S K PE+ KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK
Sbjct: 220 ISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVV 278
Query: 53 KVDDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
VD +++Q+WDT G ER S+T +YY+ A A +L++ + N ++ + L EI YA
Sbjct: 279 VVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYA 338
Query: 113 -ENAKIFLCGNNEQC------------------HNLISSTYKTSCKTGEGVEEMFADIGR 153
E+ I L GN C HN+ +TS KTG VE F + R
Sbjct: 339 QEDVVIVLIGNKADCSGSERQVKREDGERLGREHNV--PFMETSAKTGLNVELSFTAVAR 396
Query: 154 QL 155
QL
Sbjct: 397 QL 398
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K VD +++Q+WDT G
Sbjct: 9 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVDVDGDKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A ILV+ + + SF L + L EI YA I L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDVTSRESFDCLPEWLKEIEQYANQQVITVLVGNKIDLTS 126
Query: 124 ------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
Q +N+ + + S K E VE +F D+ R+L + R L
Sbjct: 127 QREVPPETGLQFAQANNM--AFLEASAKEAENVETVFMDLARELTKNARKYL 176
>gi|19920864|ref|NP_609094.1| Rab30, isoform B [Drosophila melanogaster]
gi|24582407|ref|NP_723241.1| Rab30, isoform A [Drosophila melanogaster]
gi|24582410|ref|NP_723242.1| Rab30, isoform C [Drosophila melanogaster]
gi|386769264|ref|NP_001245926.1| Rab30, isoform D [Drosophila melanogaster]
gi|195338837|ref|XP_002036030.1| GM13645 [Drosophila sechellia]
gi|7297212|gb|AAF52477.1| Rab30, isoform A [Drosophila melanogaster]
gi|17945290|gb|AAL48702.1| RE14786p [Drosophila melanogaster]
gi|22945832|gb|AAN10612.1| Rab30, isoform B [Drosophila melanogaster]
gi|22945833|gb|AAN10613.1| Rab30, isoform C [Drosophila melanogaster]
gi|194129910|gb|EDW51953.1| GM13645 [Drosophila sechellia]
gi|220947990|gb|ACL86538.1| Rab30-PA [synthetic construct]
gi|220957300|gb|ACL91193.1| Rab30-PA [synthetic construct]
gi|383291378|gb|AFH03600.1| Rab30, isoform D [Drosophila melanogaster]
Length = 223
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|332018217|gb|EGI58822.1| Ras-related protein Rab-26 [Acromyrmex echinatior]
Length = 286
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F+S + +T+G+D NK VDD I++Q+WDT G
Sbjct: 90 KVMLLGDSGVGKTCLLTRFRDGRFLSGNY-ITTVGIDFRNKVVTVDDTPIKLQIWDTAGQ 148
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 149 ERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCGT 208
Query: 129 ----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R+L
Sbjct: 209 ERAVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVAREL 250
>gi|195471587|ref|XP_002088084.1| GE18380 [Drosophila yakuba]
gi|194174185|gb|EDW87796.1| GE18380 [Drosophila yakuba]
Length = 223
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|194862770|ref|XP_001970114.1| GG23555 [Drosophila erecta]
gi|190661981|gb|EDV59173.1| GG23555 [Drosophila erecta]
Length = 223
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|346468711|gb|AEO34200.1| hypothetical protein [Amblyomma maculatum]
Length = 199
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 21/167 (12%)
Query: 10 KVILCG-EYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
KV+L G EYG GK+SL RY YD F +S+ ++T+G K+ V +R I + +WDT G
Sbjct: 7 KVVLLGKEYG-GKTSLVERYLYDRFDASTPYQNTIGAAYGAKQIAVRNRRITLGIWDTAG 65
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN----- 123
ER +++ YY+ A AAI+ F L + S+ + E+ + E +IFLCG
Sbjct: 66 SERYEAMSRIYYRGAGAAIVCFDLTDRESYQKAKFWVSELRKHEEKCQIFLCGTKNDLIT 125
Query: 124 -EQCHNLIS-------------STYKTSCKTGEGVEEMFADIGRQLI 156
E H IS ++TS KTGEG+ E+F I + I
Sbjct: 126 EEGRHRAISYHDVLEYADEIGAKMFETSSKTGEGIAELFWQIAKDYI 172
>gi|198476545|ref|XP_001357389.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
gi|198137745|gb|EAL34458.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|195434194|ref|XP_002065088.1| GK14858 [Drosophila willistoni]
gi|194161173|gb|EDW76074.1| GK14858 [Drosophila willistoni]
Length = 230
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKSSL R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 39 KLLLIGDSGVGKSSLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 96
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI Y AEN L GN
Sbjct: 97 ERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCDLEG 156
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
E L +TS KT VE+ F + Q+ ++R++ Q A
Sbjct: 157 KRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI----KARMKNQPSAA 209
>gi|322798119|gb|EFZ19958.1| hypothetical protein SINV_15097 [Solenopsis invicta]
Length = 209
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ VGK+SL RY D+F SS ++T+G +K +V+D ++ M +WDT G
Sbjct: 16 KVVLLGDVKVGKTSLMERYVNDSFNSSRPYQNTIGTVFASKRVQVNDVTLMMGIWDTAGS 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG-------- 121
E+ ++T +YY+ A+AAI+ + + ++F + E+ + EN K++LC
Sbjct: 76 EKYDAMTRTYYRGAKAAIVCYDITQPSTFQRARHWVRELRSIEENCKVYLCATKKDLCDE 135
Query: 122 ----NNEQCHNLI--------SSTYKTSCKTGEGVEEMFADI 151
++ N++ + + TS KTGE + E+F +I
Sbjct: 136 GFVSDDPDMQNMVERYASGTQTKLFVTSSKTGENIVELFDEI 177
>gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
gi|88183147|gb|EAQ90615.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
Length = 205
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSKKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVMVDDRRVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +L
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|407036472|gb|EKE38178.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 190
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL GE GVGK+SL +RY + F + K T+G D K V+++ +Q+WDT G
Sbjct: 3 KLILIGESGVGKTSLIQRYVMNKF--EPTYKITIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--VTYAENAKIFLCGNNEQCH 127
E+ +S+ SS+Y+ ++ AI+VF + N +SF + + E ++ I +CGN C
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEYSRALNGKDVPIIICGNKVDCQ 120
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ ST +TS T +GV ++F ++ + +I
Sbjct: 121 PRLVSTESARQWCEGRNYSYIETSAATAQGVNDLFMEVVKVII 163
>gi|189236660|ref|XP_970787.2| PREDICTED: similar to Rab30 CG9100-PB [Tribolium castaneum]
Length = 203
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K VD+ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVDVDNEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A ILV+ + +F L L EI YA + + L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASSKVLRVLVGNKIDRED 126
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ HN+ +TS K E VE +F I L+ RSR
Sbjct: 127 REIPTHVGEEFAERHNMY--FLETSAKEAENVERLFMQIAEDLMKQARSR 174
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKSSL R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN + +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYACENVNKLLVGNKCDLEG 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
++S+ +TS KT VE+ F + Q+ ++R++ Q A
Sbjct: 128 KRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI----KARMKNQPSAA 180
>gi|195480512|ref|XP_002086676.1| GE23262 [Drosophila yakuba]
gi|195495620|ref|XP_002095344.1| GE19744 [Drosophila yakuba]
gi|194181445|gb|EDW95056.1| GE19744 [Drosophila yakuba]
gi|194186466|gb|EDX00078.1| GE23262 [Drosophila yakuba]
Length = 416
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 30/182 (16%)
Query: 1 MASIKVPEQ--------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEY 52
++S K PE+ KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK
Sbjct: 203 ISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVV 261
Query: 53 KVDDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
VD +++Q+WDT G ER S+T +YY+ A A +L++ + N ++ + L EI YA
Sbjct: 262 VVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYA 321
Query: 113 -ENAKIFLCGNNEQC------------------HNLISSTYKTSCKTGEGVEEMFADIGR 153
E+ I L GN C HN+ +TS KTG VE F + R
Sbjct: 322 QEDVVIVLIGNKADCSGSERQVKREDGERLGREHNV--PFMETSAKTGLNVELSFTAVAR 379
Query: 154 QL 155
QL
Sbjct: 380 QL 381
>gi|320593309|gb|EFX05718.1| rab small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 670
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K K+I+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVPVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LVF ++NA SF + E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFEAIEGWRDEFLVQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN E+ +IS+ ++TS K VE+ F I + +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRATTFCQAHGIPYFETSAKEAINVEQAFEVIAKNAL 175
>gi|194758323|ref|XP_001961411.1| GF14944 [Drosophila ananassae]
gi|190615108|gb|EDV30632.1| GF14944 [Drosophila ananassae]
Length = 225
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|332375757|gb|AEE63019.1| unknown [Dendroctonus ponderosae]
Length = 258
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
+ +VP K IL G+ GVGK+SL ++ F SS +T+G+ K +VDD ++
Sbjct: 52 LEDAEVPVHKTILLGDSGVGKTSLLVKFDTGKF-ESSKFSATVGIGFTTKVVQVDDSKVK 110
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFL 119
+Q+WDT G ER +T +YY+ A A +L++ + N SF + L EI YA ++ I L
Sbjct: 111 LQIWDTAGQERFRCVTHAYYRDAHALLLLYDVTNKKSFDNIRAWLGEIKDYAHDDVVIML 170
Query: 120 CGNNEQCHN----------LISSTYK-----TSCKTGEGVEEMFADIGRQLILSNRSRLE 164
GN C + ++ Y+ TS K+G+ VE F I R L N + +
Sbjct: 171 LGNKADCGSDRAIKREEGERLAREYRVTFMETSAKSGQNVELAFHAIARDLTSRNAANAD 230
Query: 165 LQ 166
Q
Sbjct: 231 PQ 232
>gi|161085488|ref|NP_001097658.1| Rab26, isoform C [Drosophila melanogaster]
gi|281366559|ref|NP_001163488.1| Rab26, isoform D [Drosophila melanogaster]
gi|442633896|ref|NP_001262151.1| Rab26, isoform E [Drosophila melanogaster]
gi|66772429|gb|AAY55526.1| IP08719p [Drosophila melanogaster]
gi|158028599|gb|AAN12164.2| Rab26, isoform C [Drosophila melanogaster]
gi|189458927|gb|ACD99453.1| IP08419p [Drosophila melanogaster]
gi|272455263|gb|ACZ94759.1| Rab26, isoform D [Drosophila melanogaster]
gi|440216121|gb|AGB94844.1| Rab26, isoform E [Drosophila melanogaster]
Length = 410
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 30/182 (16%)
Query: 1 MASIKVPEQ--------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEY 52
++S K PE+ KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK
Sbjct: 197 ISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVV 255
Query: 53 KVDDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
VD +++Q+WDT G ER S+T +YY+ A A +L++ + N ++ + L EI YA
Sbjct: 256 VVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYA 315
Query: 113 -ENAKIFLCGNNEQC------------------HNLISSTYKTSCKTGEGVEEMFADIGR 153
E+ I L GN C HN+ +TS KTG VE F + R
Sbjct: 316 QEDVVIVLIGNKADCSGSERQVKREDGERLGREHNV--PFMETSAKTGLNVELSFTAVAR 373
Query: 154 QL 155
QL
Sbjct: 374 QL 375
>gi|195397965|ref|XP_002057598.1| GJ18220 [Drosophila virilis]
gi|194141252|gb|EDW57671.1| GJ18220 [Drosophila virilis]
Length = 225
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|156372633|ref|XP_001629141.1| predicted protein [Nematostella vectensis]
gi|156216134|gb|EDO37078.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
P KV+L GE GVGK+SLF R + F + R++T+G+D+ +K K+ ++ + + +WDT
Sbjct: 10 PLFKVVLLGEAGVGKTSLFYRLKENHF--TPGRRNTIGIDSCSKFVKIGEKQVTLSVWDT 67
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---- 122
G+ER ++T +YY+ A A IL+F++D+ S L + + + +A L N
Sbjct: 68 AGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKVLVANKIDL 127
Query: 123 --------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ +CH T++ S KTGEG+ + I + L+
Sbjct: 128 DEQVTTESVELFASSHECH----LTFRISAKTGEGIGKACTQIAKALL 171
>gi|198430272|ref|XP_002128387.1| PREDICTED: similar to Rab35 [Ciona intestinalis]
Length = 203
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S S +T+G+D + ++ +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--SGSYITTIGVDFKIRTIEIGGEKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQC--- 126
ER +ITS+YY+ I+V+ + +A SF + + L EI ++ L GN + C
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVQSAESFVNVKRWLHEIEQNCDSVNRILVGNKDDCAEK 127
Query: 127 ------------HNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ + ++TS K + +EEMF +I RQ++ R++ Q G
Sbjct: 128 KVVETADAKKFSDQINITLFETSAKENKNIEEMFTEITRQVL---RTKQNSQNQSGAG-Q 183
Query: 175 TDSFKL 180
D KL
Sbjct: 184 PDGLKL 189
>gi|347967168|ref|XP_320947.5| AGAP002092-PA [Anopheles gambiae str. PEST]
gi|333469728|gb|EAA01022.5| AGAP002092-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +VD++ I++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVDNQKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI +A N+K+ L GN
Sbjct: 67 ERFRSITQSYYRSASALILVYDISCQPTFDCLPDWLREIQEHA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + + + + +TS K + VE +F DI LI R++
Sbjct: 126 DREIPQEVGAEFAKQHGMYFLETSAKQADNVERLFYDIAAVLIEQARTK 174
>gi|169779179|ref|XP_001824054.1| Ras-related protein Rab7 [Aspergillus oryzae RIB40]
gi|46403855|gb|AAS92973.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|46403857|gb|AAS92974.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|83772793|dbj|BAE62921.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874233|gb|EIT83154.1| Ras-related GTPase [Aspergillus oryzae 3.042]
Length = 205
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|242763676|ref|XP_002340622.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723818|gb|EED23235.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
Length = 206
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 28/196 (14%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVIGNKIDVEENKRMISSKRAMTFCQSKGNLPYFETSAKEALNVEQAFEVIARSALAQ 178
Query: 159 NRSRLELQTMGAGGIG 174
S + G G G
Sbjct: 179 EES----EEYGGGDFG 190
>gi|212529382|ref|XP_002144848.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
gi|210074246|gb|EEA28333.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
Length = 206
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 28/196 (14%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVIGNKIDVEENKRMISSKRAMTFCQSKGSLPYFETSAKEALNVEQAFEVIARSALAQ 178
Query: 159 NRSRLELQTMGAGGIG 174
S + G G G
Sbjct: 179 EES----EEYGGGDFG 190
>gi|403372762|gb|EJY86287.1| Rab family GTPase [Oxytricha trifallax]
Length = 223
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 1 MASIKVPEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD 56
M+S K P K+I+ G+ VGK+ L R++ D+F S T+G+D K+ VDD
Sbjct: 1 MSSFKKPGYDHLLKLIIIGDSSVGKTCLLLRFSEDSF--PVSHMPTIGIDFKIKKINVDD 58
Query: 57 RSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-- 114
+ +++Q+WDT G ER +IT +YYK A ILV+ + +F+ + L +I +A
Sbjct: 59 KRVKLQVWDTAGQERFRTITQTYYKGAMGIILVYDCTDQQTFNNIQNWLKQIDQHANQNV 118
Query: 115 AKIFLCGNNEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
AK+ + ++ +I + ++TS KTG V E+F I ++ R
Sbjct: 119 AKVLVANKCDKPDKVIETERGKQLAADHGLLFFETSAKTGHNVNEVFHQIANVIV---RE 175
Query: 162 RLELQTMGAGGIG--------------TDSFKLGGRGSEE 187
+L AGG+ ++FK+G R +E+
Sbjct: 176 KLPAIQGNAGGMNQGGFAGQNAARQQQKNNFKMGDRDNEQ 215
>gi|340500975|gb|EGR27802.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 254
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K ++ G VGKSS+ R++ D F + S +T+G+D K +D + I++Q+WDT G
Sbjct: 11 KFVIIGNSNVGKSSILMRFSDDQF--NESYLTTIGVDFRFKTLNIDQKLIKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +IT++YYK A+ +LV+ + N SF + + L E+ YAE + ++ L GN +C
Sbjct: 69 ERFRTITNAYYKGADVIVLVYDISNNESFQDIEKFWLKEVENYAEKDVELILLGN--KCD 126
Query: 128 NLISST-----------------YKTSCKTGEGVEEMFADIGRQLI 156
T Y+TS KT E +E+ F +IG++LI
Sbjct: 127 LDAQRTIDTIQVQEYAEKKGMEFYETSAKTNESIEKAFVNIGKKLI 172
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 8 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q LLEI YA EN L GN
Sbjct: 66 ERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLLEIERYACENVNKLLVGN 119
>gi|345484883|ref|XP_003425147.1| PREDICTED: ras-related protein Rab-30-like [Nasonia vitripennis]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
T+ +TS K E VE +F +I +L+ R +
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARCK 174
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 70 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 129
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E L +TS KT VE+ F + ++
Sbjct: 130 KKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEI 171
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
++S + K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K +DDR+++
Sbjct: 12 ISSTSLKRTKIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTLYLDDRTVR 69
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFL 119
+QLWDT G ER S+ SY + + AI+VF + N ASF ++ + ++ + N + L
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVL 129
Query: 120 CGNNEQCHN-----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
GN + L +T K TS K G V+ +F I L
Sbjct: 130 VGNKADLSDKRQVTLEEATAKSQQLNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|327277372|ref|XP_003223439.1| PREDICTED: ras-related protein Rab-6A-like [Anolis carolinensis]
Length = 215
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 22 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++VF L N SF S+ + ++ T + I L GN
Sbjct: 80 ERFRSLIPSYIRDSAAAVIVFDLTNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 139
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 140 KRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 181
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 22/169 (13%)
Query: 7 PEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
PE K++L G+ GVGKS L R+A D++ + + ST+G+D K +D ++I++Q
Sbjct: 5 PEHDFFFKILLIGDSGVGKSCLLLRFADDSW--TDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
+WDT G ER +ITSSYY+ A+ ILV+ + SF+ + Q + EI YA EN L G
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIERYACENVNKLLVG 122
Query: 122 NNEQCHN--LISST-------------YKTSCKTGEGVEEMFADIGRQL 155
N N ++ S +TS K VEE F + R +
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDI 171
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 34/198 (17%)
Query: 10 KVILCGEYGVGKSSLFRRYA--------------YDTFISSSSRKSTLGLDNFNKEYKVD 55
K++L G+ GVGKS L R+A DT+ + S ST+G+D K ++D
Sbjct: 21 KILLIGDSGVGKSCLLLRFAGLLKLFYKLRNNDTDDTY--TDSYISTIGVDFKIKTIEID 78
Query: 56 DRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-EN 114
D+ I++Q+WDT G ER +ITSSYY+ A+ I+V+ + + SF+ + ++EI YA E+
Sbjct: 79 DKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASED 138
Query: 115 AKIFLCGNNEQCHNLISSTY---------------KTSCKTGEGVEEMFADIGRQLILSN 159
+ L GN N S +Y +TS K VE+ F + + + N
Sbjct: 139 VQKILIGNKIDLKNDRSVSYEEGKELAESCNIQFLETSAKISHNVEQAFKTMAYE--IKN 196
Query: 160 RSRLELQTMGAGGIGTDS 177
+S+LE Q G I ++
Sbjct: 197 KSQLENQQKGRANINLNA 214
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 25/191 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + ++F + Q L EI YA E L GN N
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQWLQEIERYACEGVNKLLVGNKADLTN 130
Query: 129 LISSTYK---------------TSCKTGEGVEEMFADIGRQLILSNRSRLELQTM---GA 170
+ ++ TS K VE+ F + +Q+ + R+ + M A
Sbjct: 131 SKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQI----KDRMGVSAMQNGSA 186
Query: 171 GGIGTDSFKLG 181
GG G + K+G
Sbjct: 187 GGAGKSTLKVG 197
>gi|427787033|gb|JAA58968.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 199
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 21/167 (12%)
Query: 10 KVILCG-EYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
KV+L G EYG GK+SL RY YD F +S+ ++T+G K+ V +R I + +WDT G
Sbjct: 7 KVVLLGKEYG-GKTSLVERYLYDRFDASTPYQNTIGAAYGAKQIAVRNRKITLGIWDTAG 65
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQC-- 126
ER +++ YY+ A AAI+ F L + S+ + E+ + E +IFLCG
Sbjct: 66 SERYEAMSRIYYRGAGAAIVCFDLTDRESYQKAKFWVDELRKHEEKCQIFLCGTKNDLIK 125
Query: 127 ----------HNLI-------SSTYKTSCKTGEGVEEMFADIGRQLI 156
H+++ + ++TS KTGEG+ E+F I + I
Sbjct: 126 EEGRFRPISYHDVLDYADEIGAKMFETSSKTGEGIAELFCQIAKDHI 172
>gi|198466657|ref|XP_002135235.1| GA23949 [Drosophila pseudoobscura pseudoobscura]
gi|198150700|gb|EDY73862.1| GA23949 [Drosophila pseudoobscura pseudoobscura]
Length = 417
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 221 KVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 279
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 280 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSG 339
Query: 127 ----------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 340 SERQVKREDGERLGREHNV--PFMETSAKTGLNVELAFTAVARQL 382
>gi|389634909|ref|XP_003715107.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|351647440|gb|EHA55300.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|440475602|gb|ELQ44271.1| GTP-binding protein ypt7 [Magnaporthe oryzae Y34]
gi|440481863|gb|ELQ62400.1| GTP-binding protein ypt7 [Magnaporthe oryzae P131]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LVF ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|440297914|gb|ELP90555.1| hypothetical protein EIN_019940 [Entamoeba invadens IP1]
Length = 204
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 17/157 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ GE GVGK+++ RY + F + S ST+G+D K + +D + I++QLWDT G
Sbjct: 14 KVLIIGESGVGKTAVLERYCDNVF--NESLLSTVGVDFKAKYFTIDSKKIKVQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
E+ +ITSSYY+ I+ F + + A+F +S L E+ + +I + GN
Sbjct: 72 EKFRNITSSYYRGTHGCIVAFDVTDLATFEKISYWLGELANEKQQPEIIILGNKIDAPNR 131
Query: 123 ---NEQCHNLISST-----YKTSCKTGEGVEEMFADI 151
+E N + +S KTGEG+E +F +I
Sbjct: 132 KVTDEMVENFSRQNGGLKIFYSSAKTGEGIENVFTEI 168
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 20/178 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAG 171
E +L +TS K VE+ F + + + NR GAG
Sbjct: 131 KKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAE--IKNRMGPSPAPQGAG 186
>gi|85103291|ref|XP_961487.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336274761|ref|XP_003352134.1| hypothetical protein SMAC_02569 [Sordaria macrospora k-hell]
gi|30580489|sp|Q9C2L8.1|RAB7_NEUCR RecName: Full=Probable Ras-related protein Rab7
gi|12718294|emb|CAC28856.1| probable GTPase Rab7 protein [Neurospora crassa]
gi|28923033|gb|EAA32251.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336473057|gb|EGO61217.1| hypothetical protein NEUTE1DRAFT_116033 [Neurospora tetrasperma
FGSC 2508]
gi|350293695|gb|EGZ74780.1| putative ras-related protein Rab7 [Neurospora tetrasperma FGSC
2509]
gi|380092213|emb|CCC09989.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R ++
Sbjct: 119 PFVVLGNKIDMEESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|398406058|ref|XP_003854495.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
gi|339474378|gb|EGP89471.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR + MQLWDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVTMQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+ + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVLGNKV 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSR 162
E+ +ISS ++TS K VE+ F I R + S+
Sbjct: 128 DVEESKRMISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESQ 182
>gi|194749449|ref|XP_001957151.1| GF10277 [Drosophila ananassae]
gi|190624433|gb|EDV39957.1| GF10277 [Drosophila ananassae]
Length = 403
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 207 KVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 265
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 266 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSG 325
Query: 127 ----------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 326 SERQVKREDGERLGREHNV--PFMETSAKTGLNVELAFTAVARQL 368
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E H L +TS K+ VE+ F + ++
Sbjct: 131 KKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEI 172
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E H L +TS K+ VE+ F + ++
Sbjct: 131 KKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEI 172
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 24/184 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKVDVEESKRAISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQ 178
Query: 159 NRSR 162
S+
Sbjct: 179 EESQ 182
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 23/184 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ +SS ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TSSYISTIGVDFKIRTIEIDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF +SQ L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRYACEGVNKLLVGNKNDLES 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
S + +TS K VE+ F + + + + R+ ++G+G
Sbjct: 128 KKSVEFNVAKEFAEQLNIPFLETSAKDSTNVEQAFLTMAKHI----KDRMGTNSVGSGA- 182
Query: 174 GTDS 177
GT S
Sbjct: 183 GTKS 186
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 22/181 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSY--TESYISTIGVDFKIRTLNLDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDVESFNNVKTWLSEIDKYASENVNKLLVGNKSDLIA 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E +L +TS K VEE F + + +SR+ Q GAG
Sbjct: 128 KKAVDPGMAKEFADSLGIPFLETSAKNSTNVEEAFIRMATDI----KSRVAAQGPGAGRP 183
Query: 174 G 174
G
Sbjct: 184 G 184
>gi|357605862|gb|EHJ64809.1| hypothetical protein KGM_02869 [Danaus plexippus]
Length = 200
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +VD +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN-----N 123
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYANNKVLRILVGNKTDRED 126
Query: 124 EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLI 156
+ I + +TS K E VE +F +I +L+
Sbjct: 127 REIPRHIGEDFAQRHGMYFLETSAKEAENVERLFMEIAVELM 168
>gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
gi|119407638|gb|EAW17587.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
Length = 205
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ L Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIARYACENVNKLLVGN 121
>gi|126649339|ref|XP_001388341.1| rab1a protein [Cryptosporidium parvum Iowa II]
gi|126117435|gb|EAZ51535.1| rab1a protein, putative [Cryptosporidium parvum Iowa II]
Length = 208
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D + S +T+G+D + K+DD+ I++Q+WDT G
Sbjct: 9 KLVLIGDSGVGKSCLLLRFAQDDSFTDS-YITTIGVDFRFRTIKIDDKIIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER +ITS+YY+ A+ +LV+ + +SF + + + E+ Y ++ L GN
Sbjct: 68 ERFRTITSAYYRGADGVVLVYDTTSTSSFDHIDEWVTEVNRYTTDSTKILIGNKCDLTSQ 127
Query: 123 --------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
++ L ++S K VEE F +I R+L+
Sbjct: 128 KMVDFATGQKKAQELQVDFMESSAKNSTNVEECFVNIARKLL 169
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E NL +TS K+ VE+ F + ++
Sbjct: 128 RKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEI 169
>gi|32398960|emb|CAD98425.1| rab1a protein, probable [Cryptosporidium parvum]
Length = 213
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D + S +T+G+D + K+DD+ I++Q+WDT G
Sbjct: 14 KLVLIGDSGVGKSCLLLRFAQDDSFTDS-YITTIGVDFRFRTIKIDDKIIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER +ITS+YY+ A+ +LV+ + +SF + + + E+ Y ++ L GN
Sbjct: 73 ERFRTITSAYYRGADGVVLVYDTTSTSSFDHIDEWVTEVNRYTTDSTKILIGNKCDLTSQ 132
Query: 123 --------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
++ L ++S K VEE F +I R+L+
Sbjct: 133 KMVDFATGQKKAQELQVDFMESSAKNSTNVEECFVNIARKLL 174
>gi|363750482|ref|XP_003645458.1| hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889092|gb|AET38641.1| Hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 221
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DDR+I++QLWDT G
Sbjct: 14 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTVYLDDRNIRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNNEQCH 127
ER S+ SY + + AI+V+ + N SF + + + ++ T + LC GN
Sbjct: 72 ERFRSLIPSYIRDSHVAIVVYDVTNKRSFEYIDKWVEDVKTERGEENLILCIVGNKNDLV 131
Query: 128 NLISSTYK----------------TSCKTGEGVEEMFADIGRQL 155
+ S + K TS K G V+++F I + L
Sbjct: 132 DERSVSTKEGEMKAQLLNAKIFMETSTKAGFNVKQLFKSIAKLL 175
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 19/164 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L RY+ D F ++S +T+G+D K +D + ++MQ+WDT G
Sbjct: 16 KLLLIGDSGVGKSCLLLRYSDDKF--TTSFITTIGIDFKIKTIDLDQKKVKMQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +IT++YY+ A +LV+ + + SF + + I +A E AK+ L GN C +
Sbjct: 74 ERFRTITAAYYRGAHGVLLVYDVTDETSFENVRNWMRNIEAHASEAAKVCLIGNKCDCED 133
Query: 129 LISST----------------YKTSCKTGEGVEEMFADIGRQLI 156
++TS K+G VEE F+ + R+ +
Sbjct: 134 SKRKVTKERGVALAKEFGVPFFETSAKSGLRVEEAFSSMARRCV 177
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S ST+G+D + K+D +++++Q+WDT G
Sbjct: 11 KLVLIGDSGVGKSCLLLRFADDAF--TDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITS+YY+ A+ I+V+ + SF ++ L E+ YA E L GN
Sbjct: 69 ERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRED 128
Query: 123 --------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
E +L +TS K VEE F + +LI + +R Q
Sbjct: 129 KVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQ 180
>gi|123426563|ref|XP_001307064.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736292|gb|AAX97475.1| small Rab GTPase RabE2 [Trichomonas vaginalis]
gi|121888672|gb|EAX94134.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+ GE VGK+S+ +R+ D F S R ST+ F K + I +QLWDT G
Sbjct: 4 KVVFLGEGRVGKTSIGKRWV-DGFFDPSMR-STISAAFFQKTVNAGSKKINIQLWDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV-TYAENAKIFLCGNN----- 123
E S+ YYK A AAILV+S+ ++ SF + Q E+V + +N KI LCGN
Sbjct: 62 EEYHSLAPIYYKDAVAAILVYSVTDSKSFEKMQQWRKELVSSRGDNIKIILCGNKIDLPS 121
Query: 124 ------EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
+Q + ++ S KTG+G+E MF +G L S + LQ G
Sbjct: 122 QRTVQYDQAEAIAKQYGCPYFEVSAKTGQGIETMFLRLGEIL-----STIPLQNTGP 173
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 22/169 (13%)
Query: 7 PEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
PE K++L G+ GVGKS L R+A D++ + + ST+G+D K +D ++I++Q
Sbjct: 3 PEHDFFFKILLIGDSGVGKSCLLLRFADDSW--TDTHISTIGVDFKIKTLNLDGKTIKLQ 60
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
+WDT G ER +ITSSYY+ A+ ILV+ + SF+ + Q + EI YA EN L G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIDRYACENVNKLLVG 120
Query: 122 N-----NE------QCHNLISST----YKTSCKTGEGVEEMFADIGRQL 155
N NE Q + S +TS K VEE F + R +
Sbjct: 121 NKTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDI 169
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + K+D++++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTIKLDNKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F L Q L EI YA +N L GN H+
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDCTDMETFTNLKQWLEEIARYACDNVNKLLVGNKCDLHD 127
>gi|195013859|ref|XP_001983918.1| GH15303 [Drosophila grimshawi]
gi|193897400|gb|EDV96266.1| GH15303 [Drosophila grimshawi]
Length = 426
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 230 KVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 288
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 289 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSS 348
Query: 127 ----------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 349 SERQVKREDGERLGREHNV--PFMETSAKTGLNVELAFTAVARQL 391
>gi|59897141|gb|AAX11937.1| Rab GTPase [Entamoeba histolytica]
Length = 192
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK++L R+Y F S ST+G+D K D++I +QLWDT G
Sbjct: 8 KVLLIGDSGVGKTALLRQYCDQKF--SEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER +IT+SYY+ ++ ++V+ + N S ++ + E+ + IFL GN N
Sbjct: 66 ERFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGELKKENVDGIIFLVGNKIDVTNS 125
Query: 130 ISSTYK------------TSCKTGEGVEEMFADIGRQLI 156
++ ++ S KTGEGV+++F + + ++
Sbjct: 126 LTKEHEDIIKTINLPHFTVSAKTGEGVQDLFTQLVKSIL 164
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E NL +TS K+ VE+ F + ++
Sbjct: 128 KKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEI 169
>gi|307167586|gb|EFN61130.1| Ras-related protein Rab-30 [Camponotus floridanus]
Length = 183
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLI 156
T+ +TS K E VE +F +I +L+
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELM 168
>gi|307171186|gb|EFN63173.1| Ras-related protein Rab-37 [Camponotus floridanus]
Length = 198
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+V+L G+ GVGK+ L R+ F+S + +T+G+D NK VDD I++Q+WDT G
Sbjct: 2 QVMLLGDSGVGKTCLLTRFRDGRFLSGNY-ITTVGIDFRNKVVTVDDTPIKLQIWDTAGQ 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 61 ERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCGT 120
Query: 129 ----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R+L
Sbjct: 121 ERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVAREL 162
>gi|237842853|ref|XP_002370724.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211968388|gb|EEB03584.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 243
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 29/187 (15%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
+ P K +L G+ VGKSSL R+ +TF S + ++T+G F + +VD R+++ ++W
Sbjct: 37 RPPSYKTVLLGDASVGKSSLVVRFVKNTF--SDTMETTIGAAFFTQALQVDGRTVKFEIW 94
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASF---HVLSQHLLEIVTYAENAKIFLCG 121
DT G ER +S+ YY+ A AAI+V+ N ASF V Q L ++ N I L
Sbjct: 95 DTAGQERFSSLAPMYYRGAAAAIVVYDQSNMASFDRAQVWVQQLQ--LSGNSNIVIALAA 152
Query: 122 N-----NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQT 167
N ++Q + Y +TS KTG+ V+++F+ I R RL +
Sbjct: 153 NKMDLPHKQVDLHLGRQYAEENGLLFIETSAKTGQNVQQLFSMIAR--------RLPEKP 204
Query: 168 MGAGGIG 174
+GA G+G
Sbjct: 205 VGAQGLG 211
>gi|195577211|ref|XP_002078466.1| GD22516 [Drosophila simulans]
gi|194190475|gb|EDX04051.1| GD22516 [Drosophila simulans]
Length = 223
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K+ +V+ I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKKVEVEGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER S T SYY+ A A ILV+ + +F L L EI YA N+K+ L GN
Sbjct: 67 ERFRSSTQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD 125
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + I + +TS K E VE +F +I +LI RS+
Sbjct: 126 DREIPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 22/169 (13%)
Query: 7 PEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
PE K++L G+ GVGKS L R+A D++ + + ST+G+D K +D ++I++Q
Sbjct: 3 PEHDFFFKILLIGDSGVGKSCLLLRFADDSW--TDTHISTIGVDFKIKTLNLDGKTIKLQ 60
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
+WDT G ER +ITSSYY+ A+ ILV+ + SF+ + Q + EI YA EN L G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIDRYACENVNKLLVG 120
Query: 122 N-----NE------QCHNLISST----YKTSCKTGEGVEEMFADIGRQL 155
N NE Q + S +TS K VEE F + R +
Sbjct: 121 NKTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDI 169
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ S S ST+G+D + +D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--SESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLST 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + ++ ++R+ + + G+
Sbjct: 128 KKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEI----KNRMGPPSAPSDGV 183
Query: 174 GTDSFKLGGRGSEE 187
G + R E+
Sbjct: 184 GGININSSSRPVEQ 197
>gi|242003002|ref|XP_002422574.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212505364|gb|EEB09836.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 198
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+V+L G+ GVGK+ L R+ F+S + ST+G+D NK VDD +++Q+WDT G
Sbjct: 5 QVMLLGDSGVGKTCLLIRFRDGQFLSGNF-ISTVGIDFRNKIVTVDDTKVKLQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH- 127
ER S+T +YY+ A A +L++ + N SF + L EI YA E+ I L GN C
Sbjct: 64 ERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLGEIRDYAQEDVVIMLLGNKADCSA 123
Query: 128 ---------NLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
++ Y +TS KTG V+ F I R+L
Sbjct: 124 NRVIRKEDGERLAKEYDVAFMETSAKTGLNVDLAFIAIAREL 165
>gi|170586982|ref|XP_001898258.1| Ras-related protein Rab-26 [Brugia malayi]
gi|158594653|gb|EDP33237.1| Ras-related protein Rab-26, putative [Brugia malayi]
Length = 211
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 23/165 (13%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
V+L G+ GK+ L R+ D F++++ ST+G+D NK KV+D +++Q+WDT G E
Sbjct: 21 VMLIGDSCCGKTCLLVRFKDDAFLNNNFI-STVGIDYRNKLIKVNDAKVKLQIWDTAGQE 79
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK----IFLCGNNEQC 126
R +IT++YY+ A+A +LV+ L N SF + L I ENAK I L GN
Sbjct: 80 RFLAITTTYYRDADALLLVYDLTNRQSFINIRDWLTRI---KENAKETVLITLVGNKMDL 136
Query: 127 HNLISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
Y +TS K+G+ V+E F DI R+L+
Sbjct: 137 QRGRKVKYEEGKQLAEAYNIAFIETSAKSGQNVKETFQDIARKLV 181
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E NL +TS K+ VE+ F + ++
Sbjct: 128 KKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEI 169
>gi|332024592|gb|EGI64790.1| Ras-related protein Rab-30 [Acromyrmex echinatior]
Length = 205
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +V++ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L L EI YA N + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLLDWLREIEEYASNKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNR----SRLELQTMGA 170
T+ +TS K E VE +F +I +L+ R R E T
Sbjct: 127 REIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARCKELPRYETNTTSI 186
Query: 171 GGIGT 175
G T
Sbjct: 187 NGKTT 191
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 21/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S + +T+G+D + ++ + +++Q+WDT G
Sbjct: 15 KLLIIGDSGVGKSSLLLRFADNTF--SPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ---- 125
ER +ITS+YY+ I+V+ + + SF + + L EI T EN + L GN
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPER 132
Query: 126 -----------CHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ ++TS K VEEMF I R L+L + R +G G G
Sbjct: 133 RVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITR-LVLEAKLRAPQTNIGDSGSG 191
Query: 175 TDSFKLGG 182
+LGG
Sbjct: 192 V---RLGG 196
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S +T+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLVLIGDSGVGKSCLLLRFADDAF--TESYITTIGVDFRFRTVRIDKKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+V+ + N SF ++ L E+ YA E L GN
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTNQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDITE 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
+ TY +TS K + VEE F + +LI
Sbjct: 128 SRAVTYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELI 170
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ GVGK+S+ R+ YDTF SS ++T+G+D +K +DDR++++QLWDT G
Sbjct: 24 KLVFLGDPGVGKTSIITRFMYDTF--DSSYQATIGIDFLSKTMYLDDRTVRLQLWDTAGQ 81
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ L N SF + L ++ V ++ I L GN
Sbjct: 82 ERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVERGDDVVIVLVGNKTD--- 138
Query: 129 LISSTYKTSCKTGEGV 144
+S + + S GE +
Sbjct: 139 -LSDSRQVSTNEGEAL 153
>gi|167079098|ref|XP_001740498.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895372|gb|EDR23078.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 192
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 14/159 (8%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK++L R+Y F S ST+G+D K D++I +QLWDT G
Sbjct: 8 KVLLIGDSGVGKTALLRQYCDQKF--SEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER +IT+SYY+ ++ ++V+ + N S ++ + E+ + IFL GN
Sbjct: 66 ERFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGELKKENVDGMIFLVGNKIDVIDS 125
Query: 123 -NEQCHNLISST----YKTSCKTGEGVEEMFADIGRQLI 156
++ ++I + + S KTGEGV+++F + + ++
Sbjct: 126 LTKEHEDIIKTINLPHFTVSAKTGEGVQDLFTQLVKSIL 164
>gi|58493576|gb|AAW78556.1| RabB [Entamoeba dispar]
Length = 192
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 14/159 (8%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK++L R+Y F S ST+G+D K D++I +QLWDT G
Sbjct: 8 KVLLIGDSGVGKTALLRQYCDQKF--SEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER +IT+SYY+ ++ ++V+ + N S ++ + E+ + IFL GN
Sbjct: 66 ERFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGELKRENVDGMIFLVGNKIDVIDS 125
Query: 123 -NEQCHNLISST----YKTSCKTGEGVEEMFADIGRQLI 156
++ ++I + + S KTGEGV+++F + + ++
Sbjct: 126 LTKEHEDIIKTINLPHFTVSAKTGEGVQDLFTQLVKSIL 164
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 24/189 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL------ILSNRSRLELQT 167
Y +TS K VE+ F + RQ+ +N S+ +Q
Sbjct: 128 KKVVDYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGTTTTNNSKPSVQV 187
Query: 168 MGAGGIGTD 176
G+G++
Sbjct: 188 GPGQGVGSN 196
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER+ +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|296473716|tpg|DAA15831.1| TPA: RAB12, member RAS oncogene family [Bos taurus]
Length = 168
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 161
>gi|154309394|ref|XP_001554031.1| GTPase Rab7 [Botryotinia fuckeliana B05.10]
gi|156058234|ref|XP_001595040.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980]
gi|154700916|gb|EDO00655.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980
UF-70]
gi|347837376|emb|CCD51948.1| similar to ras-related protein rab-7a [Botryotinia fuckeliana]
Length = 205
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEENKRVISSKRAMTFCTSKGNIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|402085554|gb|EJT80452.1| Ras-like protein Rab7 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|145515323|ref|XP_001443561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834462|emb|CAI44553.1| rab_A59 [Paramecium tetraurelia]
gi|124410950|emb|CAK76164.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 21/165 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G VGKSSL RY DTF ST+G+D K K+D + I++Q+WDT G
Sbjct: 7 KIVIIGNSAVGKSSLLIRYCDDTF--RDIYLSTIGVDFRFKTIKLDGQGIKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYA-ENAKIFLCGN----- 122
ER +IT+SYYK A+ ++V+ + NA SF ++++ + E+ YA +N K+ L GN
Sbjct: 65 ERFRNITNSYYKGAQGIVIVYDVTNAKSFEDVTKYWMAELSHYADQNVKLMLLGNKIDMA 124
Query: 123 -------NEQCHNLISSTYK-----TSCKTGEGVEEMFADIGRQL 155
+E+ +S + S KT E VE F ++ R +
Sbjct: 125 TEETRQVSEEMAEQLSKEFNMQHHVVSAKTAEQVENAFINLARSI 169
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 27/190 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTS 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL-ELQTMGAGG 172
E L +TS K+ VE+ F + ++ ++R+ +Q G G
Sbjct: 128 KRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEI----KNRMGPVQQAGTG- 182
Query: 173 IGTDSFKLGG 182
S ++GG
Sbjct: 183 ---PSVRIGG 189
>gi|310792516|gb|EFQ28043.1| Ras family protein [Glomerella graminicola M1.001]
gi|380489971|emb|CCF36344.1| Ras-like protein Rab7 [Colletotrichum higginsianum]
Length = 205
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDTGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ L Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L + S K VE+ F + + + NR + +G +
Sbjct: 128 KKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAE--IKNRVGPPAPSGPSGQV 185
Query: 174 GTDSFKLGGR 183
DS + +
Sbjct: 186 KIDSTPVSSK 195
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S ST+G+D + K+D +++++Q+WDT G
Sbjct: 17 KLVLIGDSGVGKSCLLLRFADDAF--TESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER +ITS+YY+ A+ I+VF + + SF ++ L E+ YA + L GN
Sbjct: 75 ERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRTA 134
Query: 124 ------EQCHNLISST----YKTSCKTGEGVEEMFADIGRQLI 156
EQ +TS K+ + VEE F + +LI
Sbjct: 135 DRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMAGELI 177
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS + KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASRRKILLKVIILGDSGVGKTSLMNQYVNRKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + + SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N ST ++TS K G VE+ F I R L+
Sbjct: 119 PFVVLGNKVDLENRAVSTKRAQQWCHAKNDIPYFETSAKEGINVEQAFQTIARN-ALAQE 177
Query: 161 SRLEL 165
++++L
Sbjct: 178 TQVDL 182
>gi|429862214|gb|ELA36871.1| rab small monomeric gtpase [Colletotrichum gloeosporioides Nara
gc5]
Length = 205
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|67474490|ref|XP_652994.1| Rab B GTPase [Entamoeba histolytica HM-1:IMSS]
gi|7144601|gb|AAF37308.1| RabB [Entamoeba histolytica]
gi|56469903|gb|EAL47606.1| Rab B GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407035689|gb|EKE37808.1| Rab B GTPase [Entamoeba nuttalli P19]
gi|449706101|gb|EMD46018.1| RabB GTPase, putative [Entamoeba histolytica KU27]
Length = 192
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK++L R+Y F S ST+G+D K D++I +QLWDT G
Sbjct: 8 KILLIGDSGVGKTALLRQYCDQKF--SEDVSSTIGVDYRTKRVTFGDKTITLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER +IT+SYY+ ++ ++V+ + N S ++ + E+ + IFL GN N
Sbjct: 66 ERFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGELKKENVDGIIFLVGNKIDVTNS 125
Query: 130 ISSTYK------------TSCKTGEGVEEMFADIGRQLI 156
++ ++ S KTGEGV+++F + + ++
Sbjct: 126 LTKEHEDIIKTIDLPHFTVSAKTGEGVQDLFTQLVKSIL 164
>gi|302416853|ref|XP_003006258.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|261355674|gb|EEY18102.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|346974303|gb|EGY17755.1| GTP-binding protein YPTC5 [Verticillium dahliae VdLs.17]
Length = 205
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR + MQLWDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVTMQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVLGNKI 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
E+ +IS+ ++TS K VE+ F I R + S
Sbjct: 128 DVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQEES 181
>gi|145499484|ref|XP_001435727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833683|emb|CAI39321.1| rab_A66 [Paramecium tetraurelia]
gi|74833851|emb|CAI39378.1| rab_B66 [Paramecium tetraurelia]
gi|124402862|emb|CAK68330.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ + RY + F +S ST+G+D K+ VD++ I+MQ+WDT G
Sbjct: 17 KVLLIGNSGVGKTQILLRYTENQF--KTSFLSTIGIDFKIKKISVDEKVIKMQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNE---- 124
ER +IT +YYK A ILVF++++ SF + + + +I +A +N L GN
Sbjct: 75 ERYQTITQTYYKGAMGIILVFAVNDQESFRDIEKWMNQIKLHASDNIIKVLIGNKTDLPD 134
Query: 125 ------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
Q HN+ ++TS K G + + F I + LI RL Q+ A
Sbjct: 135 RCITYEDALNMAQQHNI--PYFETSAKEGTNINQTFQQIAK-LIKDQNERLPQQSDKA 189
>gi|397494200|ref|XP_003817973.1| PREDICTED: ras-related protein Rab-12 [Pan paniscus]
Length = 258
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 58 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 115
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 116 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 174
>gi|449704465|gb|EMD44701.1| small GTPase EhRabD2, putative [Entamoeba histolytica KU27]
Length = 259
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ GE VGK+ RY + F + K+T+G+ +KE +V+ + I++Q+WDT G
Sbjct: 74 KVIMVGESSVGKTCCMNRYVSNEFAEQT--KATIGVGVGSKEVEVEGKHIKLQIWDTAGQ 131
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER A++T +Y++ A AAI++F + N SF + + + IF+ GN N
Sbjct: 132 ERFATLTGNYFRNAMAAIIMFDVSNKESFENIPNWVEQCCKSDGKHIIFIAGNKIDLENR 191
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ S ++ S KTG+G+E++F ++ ++++
Sbjct: 192 VVSKEEAEEKAKELKLKYFEVSAKTGDGIEDLFNELIKEIM 232
>gi|183232413|ref|XP_655208.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802057|gb|EAL49821.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 264
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ GE VGK+ RY + F + K+T+G+ +KE +V+ + I++Q+WDT G
Sbjct: 79 KVIMVGESSVGKTCCMNRYVSNEFAEQT--KATIGVGVGSKEVEVEGKHIKLQIWDTAGQ 136
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER A++T +Y++ A AAI++F + N SF + + + IF+ GN N
Sbjct: 137 ERFATLTGNYFRNAMAAIIMFDVSNKESFENIPNWVEQCCKSDGKHIIFIAGNKIDLENR 196
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ S ++ S KTG+G+E++F ++ ++++
Sbjct: 197 VVSKEEAEEKAKELKLKYFEVSAKTGDGIEDLFNELIKEIM 237
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 18/176 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKSSL R+A DTF S++ ST+G+D + VD ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTF--SNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER ++T++YY+ A +L++ ++ + +F LSQ L E+ YA E L GN
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLID 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMG 169
E L S +TS K VE +F + +L S L T G
Sbjct: 128 CRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKLGSPLTSPTAG 183
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ L Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGN 121
>gi|452985489|gb|EME85246.1| hypothetical protein MYCFIDRAFT_61188 [Pseudocercospora fijiensis
CIRAD86]
Length = 205
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR + MQLWDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVTMQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+ + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVLGNKV 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSR 162
E+ +ISS ++TS K VE+ F I R + S+
Sbjct: 128 DREESARVISSKRAMAFCQAKGGIPYFETSAKEAINVEQAFEVIARNALAQEESQ 182
>gi|407036906|gb|EKE38386.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGK+SL +RY F+ ST+G+D KE K+ + +++Q+WDT G
Sbjct: 10 KILMIGESSVGKTSLVKRYCEGMFLEE--MMSTVGIDFEFKELKIGETPVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN--NEQCH 127
ER ++TSSY++ I+V+ ++ +F L+ + E N++I + GN +++
Sbjct: 68 ERFHNVTSSYFRGTHGCIIVYDVNKLETFEKLNYWIEEYRDEQPNSEIIIVGNKIDKEMK 127
Query: 128 NLISST-----------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
L SS Y +S KTG+ VEE+F D+ IL N+ + L
Sbjct: 128 VLESSAIQFANTRKARHYLSSAKTGQNVEEIFQDLAES-ILQNKKLIAL 175
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S S K+T+G D KE VDDR + MQLWDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SQSYKATIGADFLTKEVLVDDRLVTMQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+ + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVLGNKV 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSR 162
E+ +IS+ ++TS K VE+ F I R + S+
Sbjct: 128 DVEESKRMISTKRAQAFCQQKGGIPYFETSAKDAVNVEQAFEVIARNALAQEESQ 182
>gi|340380299|ref|XP_003388660.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 163
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 4 IKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQL 63
+ V E KV L G+ GVGK+SL R+ +DTF S + +TLG +K VD+ +I+ Q+
Sbjct: 1 MSVREVKVCLLGDVGVGKTSLVGRFVHDTF--SQNITTTLGASFMSKSLTVDNSTIKFQI 58
Query: 64 WDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN 122
WDT G ER S+ YY+ A AAI+V+ + N SF VL + E+ N + + GN
Sbjct: 59 WDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDWIAELHRLGPPNIVLAIAGN 118
Query: 123 -----NEQCHNLISSTY---------KTSCKTGEGVEEMFADI 151
+++ N + Y +TS T VEEMF +I
Sbjct: 119 KCDLEDKRELNKVRLIYASEVNAIFGETSALTARNVEEMFIEI 161
>gi|440796995|gb|ELR18090.1| Raslike GTP-binding protein YPT1, putative [Acanthamoeba
castellanii str. Neff]
Length = 212
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K +L G++GVGKS++ R+ D F ++ +T+G+D K VD + +++ +WDT G+
Sbjct: 15 KTLLVGDHGVGKSAMLARFTEDKFEDNAP--ATMGVDAKPKTVVVDGKRVKLNVWDTAGL 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQC-- 126
ER+ +TSSYY+ A I+VF + +A S+ ++ + EI YA ++ + L GN
Sbjct: 73 ERMGFLTSSYYRGAHGIIIVFDVASAGSYQNIANWVGEIERYANDSALKILVGNKSDLVQ 132
Query: 127 -------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++L ++TS K G VEE F + Q+
Sbjct: 133 REVKPEEAQAYAKNDLGVDYFETSAKEGVNVEEAFLRLAEQM 174
>gi|340501463|gb|EGR28249.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 217
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
+A V + K++ G+ VGK+S+ R+ YD F + S + T+G+D K ++D+++++
Sbjct: 6 IAGPAVMKYKIVFLGDQSVGKTSIINRFIYDNF--TGSEQPTVGIDFICKTIQLDNKTLR 63
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFL 119
+QLWDT G ER S+ SY + + AAI+V+ + N +SF+ LS+ + E+ N A IF+
Sbjct: 64 LQLWDTAGQERFKSLIPSYIRDSNAAIIVYDVTNQSSFNNLSKWIEEVKEERGNDALIFV 123
Query: 120 CGN--------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
GN N+ S K S K+G + F + L
Sbjct: 124 LGNKSDLEDTKNQQEEFNQSLKQFNLSVQKVSAKSGNNIGNFFKQLAEAL 173
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 7 PEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
PE K++L G+ GVGKS L R+A D++ + + ST+G+D K +D ++I++Q
Sbjct: 5 PEHDFFFKILLIGDSGVGKSCLLLRFADDSW--TDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
+WDT G ER +ITSSYY+ A+ ILV+ + SF + Q + EI YA EN L G
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVG 122
Query: 122 NNEQCHN--LISST-------------YKTSCKTGEGVEEMFADIGRQL 155
N N ++ S +TS K VEE F + R +
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ L Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L + S K VE+ F + + + NR + +G +
Sbjct: 128 KKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAE--IKNRVGPPAPSGPSGQV 185
Query: 174 GTDSFKLGGR 183
DS + +
Sbjct: 186 KIDSTPVSSK 195
>gi|224046089|ref|XP_002191205.1| PREDICTED: ras-related protein Rab-12 [Taeniopygia guttata]
Length = 250
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 50 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 107
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 108 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 166
>gi|196002958|ref|XP_002111346.1| rab6 [Trichoplax adhaerens]
gi|190585245|gb|EDV25313.1| rab6 [Trichoplax adhaerens]
Length = 208
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNN----- 123
ER S+ SY + + A++VF + NA SFH S+ + ++ T N I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVFDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGENKAKELNVMFIETSAKAGHNVKQLFRRVAAAL 174
>gi|126722751|ref|NP_001075503.1| ras-related protein Rab-7a [Oryctolagus cuniculus]
gi|6685839|sp|O97572.1|RAB7A_RABIT RecName: Full=Ras-related protein Rab-7a
gi|4105817|gb|AAD02564.1| Rab7 [Oryctolagus cuniculus]
Length = 207
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S++ ++Y+ A+ +LVF + +F L LE + A EN + GN
Sbjct: 68 ERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N ASF S+ + ++ + N I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
L +T K TS K G V+ +F I L
Sbjct: 139 KRQVTLEEATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|291413290|ref|XP_002722907.1| PREDICTED: RAB19, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + SR++T+G+D + +VD + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TESRQNTIGVDFTVRSLEVDGKRVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----- 123
ER +IT SYY+ A AAI+ + L A+F + + EI Y A N I L GN
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRATFESVPHWIHEIEKYGAANLVIMLIGNKSDRWE 136
Query: 124 -------EQC-----HNLISSTYKTSCKTGEGVEEMFADIGRQLILSN 159
E C H L+ + +TS K ++E+F + ++LI N
Sbjct: 137 ERHVLFEEACTLAEKHGLL-AVLETSAKESRNIDEVFVLMAKELIARN 183
>gi|289741677|gb|ADD19586.1| GTPase Rab30 [Glossina morsitans morsitans]
Length = 179
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +VD I++Q+WDT G
Sbjct: 9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVDGDKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER SIT SYY+ A A ILV+ + +F L L EI Y FL
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEY------FL---------- 110
Query: 130 ISSTYKTSCKTGEGVEEMFADIGRQLILSNR-----SRLELQTMGAGGIGTDSFKLGGRG 184
+TS K E VE +F +I +LI R S + +M A G+G+ LG +
Sbjct: 111 -----ETSAKEAENVERLFYEIAAELIDQARRKDGTSAVNKNSMDAIGLGS----LGTKA 161
Query: 185 SE 186
S+
Sbjct: 162 SQ 163
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 27/184 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKSDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + + + NR MG G +
Sbjct: 131 KKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAE--IKNR-------MGPGAV 181
Query: 174 GTDS 177
++
Sbjct: 182 TNET 185
>gi|67478653|ref|XP_654710.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56471775|gb|EAL49319.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790060|dbj|BAD82826.1| small GTPase EhRabC6 [Entamoeba histolytica]
gi|449708421|gb|EMD47886.1| small GTPase EhRabC6, putative [Entamoeba histolytica KU27]
Length = 194
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ GE VGK+++ RY D F ST+G+D +K KV D +I++QLWDT G
Sbjct: 10 KVLIIGEPSVGKTAIMERYCEDKF--HDELISTIGVDFNSKLVKVGDLTIKLQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER ++TSSYYK + ++V+ + + SF+ ++ + E E A I + GN
Sbjct: 68 ERFRNVTSSYYKGTQGCLVVYDVSDVESFNKITHWIQEYQIEQEIAFIIIVGNKIDLPSK 127
Query: 123 --NEQCHNLISST----YKTSCKTGEGVEEMFADIGR 153
NEQ + S KTGEGV E+F + +
Sbjct: 128 VTNEQADAAAKEQGYQHMRCSAKTGEGVNEIFETLAK 164
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A DT+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIIIGDSGAGKSSLLLRFADDTY--SESYMSTIGVDFKIKTVKIDNVTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFH-VLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YY+ A I V+ + + SF V L++I Y+ N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIITVYDVTSRVSFESVKKTWLVDIEKYSSANISKLLIGNKVDLE 126
Query: 128 NLISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ + TY + S KT + VE+ F I R L
Sbjct: 127 DSRAVTYDEAREFAEQNNMDYIEASAKTAQNVEKAFESIARAL 169
>gi|291235598|ref|XP_002737729.1| PREDICTED: Rab-protein 6-like [Saccoglossus kowalevskii]
Length = 210
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS KTG V+++F + L
Sbjct: 133 KRQVSIDEGERKAKELNVMHIETSAKTGYNVKQLFRRVAAAL 174
>gi|229594508|ref|XP_001031389.3| Ras family protein [Tetrahymena thermophila]
gi|225566813|gb|EAR83726.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777754|dbj|BAJ21273.1| Rab-family small GTPase Rab1C [Tetrahymena thermophila]
Length = 210
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ D F + S +T+G+D + +D + +++Q+WDT G
Sbjct: 10 KLVIIGNSGVGKSSLLLRFSDDQF--NESYLTTIGVDFRFRTLPIDQKQVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNNEQCH 127
ER +ITS+YYK A+ ++V+ + + SF + + + E+ +YAE N ++ L GN
Sbjct: 68 ERFRTITSAYYKGADGIVMVYDVTSENSFQDIDKFWISEVESYAEKNVELLLIGNKSDLE 127
Query: 128 NLISST-------------YKTSCKTGEGVEEMFADIGRQLI 156
+S+ ++ S KT + V++ F + R+L+
Sbjct: 128 KQVSTQTAQEYAKSKNMEFFECSAKTSDSVQQAFLTLARKLM 169
>gi|395511720|ref|XP_003760101.1| PREDICTED: ras-related protein Rab-12 [Sarcophilus harrisii]
Length = 246
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 46 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 103
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 104 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 163
>gi|363730689|ref|XP_003640848.1| PREDICTED: ras-related protein Rab-12 [Gallus gallus]
Length = 250
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 50 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 107
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 108 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 166
>gi|328709772|ref|XP_001948484.2| PREDICTED: ras-related protein Rab-26-like isoform 1 [Acyrthosiphon
pisum]
Length = 274
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 18/165 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ G+ GVGK+ L R+ D F+ + ST+G+D NK VDD +++Q+WDT G
Sbjct: 80 KVMVLGDSGVGKTCLLVRFRDDMFLGGNY-ISTVGVDFRNKIISVDDSKVKLQIWDTAGQ 138
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH- 127
ER S+T +YY+ A A +L++ + N SF + L EI YA + I L GN C
Sbjct: 139 ERFRSVTHAYYRDAHALLLLYDVTNKVSFDNIRAWLSEIRDYANDQVVIMLIGNKADCSL 198
Query: 128 ----------NLISSTY-----KTSCKTGEGVEEMFADIGRQLIL 157
++ Y +TS K+G VE F + R+L+
Sbjct: 199 NDRMVKREDGEQLAKEYSVTFMETSAKSGFNVEIAFMAVARELLF 243
>gi|317037167|ref|XP_001398680.2| Ras-related protein Rab7 [Aspergillus niger CBS 513.88]
gi|350630527|gb|EHA18899.1| hypothetical protein ASPNIDRAFT_54109 [Aspergillus niger ATCC 1015]
Length = 205
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|427781093|gb|JAA55998.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 255
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L RY +F+S + ST+G+D NK VDD +++Q+WDT G
Sbjct: 60 KVMLVGDSGVGKTCLLIRYKDGSFLSGAY-ISTVGMDFRNKVVTVDDYKVKLQIWDTAGQ 118
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN------ 122
ER S+T +YY+ A A +L++ + N SF L EI YA+ + I L GN
Sbjct: 119 ERFRSVTHAYYRDAHALLLLYDVSNKTSFDNTRAWLGEINEYAQDDVVIMLIGNKADITQ 178
Query: 123 NEQCHN----LISSTY-----KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ Q ++ Y +TS KTG VE F + R+L + R GA G
Sbjct: 179 DRQVRTEDGERLAREYGVAFMETSAKTGCNVELAFMAVAREL----KQRASRSAHGASG 233
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Query: 3 SIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
S +P + V+L G+ GVGKS+L R+ + F S KST+G++ + ++D ++I+ Q
Sbjct: 16 SWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQIDGKTIKAQ 73
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCG 121
+WDT G ER +ITS+YY+ A A+LV+ + ++SF +S+ L E+ +A+ N I L G
Sbjct: 74 IWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDHADSNIVIMLVG 133
Query: 122 NNEQCHNL 129
N +L
Sbjct: 134 NKTDKRHL 141
>gi|427779031|gb|JAA54967.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 297
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 21/179 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L RY +F+S + ST+G+D NK VDD +++Q+WDT G
Sbjct: 102 KVMLVGDSGVGKTCLLIRYKDGSFLSGAY-ISTVGMDFRNKVVTVDDYKVKLQIWDTAGQ 160
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN------ 122
ER S+T +YY+ A A +L++ + N SF L EI YA+ + I L GN
Sbjct: 161 ERFRSVTHAYYRDAHALLLLYDVSNKTSFDNTRAWLGEINEYAQDDVVIMLIGNKADITQ 220
Query: 123 NEQCHN----LISSTY-----KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ Q ++ Y +TS KTG VE F + R+L + R GA G
Sbjct: 221 DRQVRTEDGERLAREYGVAFMETSAKTGCNVELAFMAVAREL----KQRASRSAHGASG 275
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D+++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDNKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E + L +TS K+ VE+ F + ++
Sbjct: 131 KKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEI 172
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ +TF S KST+G++ + +V+ ++I+ Q+WDT G
Sbjct: 21 KVVLIGDSGVGKSNLLSRFTKNTF--SLDSKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + AA+F + + L E+ +A+ N I L GN +
Sbjct: 79 ERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTDLRH 138
Query: 129 LIS 131
L S
Sbjct: 139 LRS 141
>gi|167396307|ref|XP_001742002.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893199|gb|EDR21539.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 194
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ GE VGK+++ RY D F ST+G+D +K KV D +I++QLWDT G
Sbjct: 10 KVLIIGEPSVGKTAIMERYCEDKF--HDELISTIGVDFNSKLVKVGDLTIKLQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER ++TSSYYK + ++V+ + + SF+ ++ + E E A I + GN
Sbjct: 68 ERFRNVTSSYYKGTQGCLVVYDVSDIESFNKITHWVQEYQNEQEIAFIIIVGNKIDLPSK 127
Query: 123 --NEQCHNLISST----YKTSCKTGEGVEEMFADIGR 153
NEQ + S KTGEGV E+F + +
Sbjct: 128 VTNEQAEAAAKEKGYQHMRCSAKTGEGVNEIFETLAK 164
>gi|327281978|ref|XP_003225722.1| PREDICTED: ras-related protein Rab-12-like [Anolis carolinensis]
Length = 258
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 58 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 115
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 116 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 174
>gi|225713578|gb|ACO12635.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
gi|290561959|gb|ADD38377.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
Length = 203
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L R++ F + +T+G+D K ++ I++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRQFTQGMF--PPGQGATIGVDFMIKTLEIQGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNN---- 123
ER SIT SYY+ A A ILVF + N +F + L EI YA + K+ L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYA-SPKVLKVLVGNKTDRD 125
Query: 124 -----EQCHNLISSTY-----KTSCKTGEGVEEMFADIGRQLILSNRSR 162
E+ + Y +TS K+ + VE +F +I ++L+ +S+
Sbjct: 126 DREIPEEIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQAKSK 174
>gi|158186685|ref|NP_037149.1| ras-related protein Rab-12 [Rattus norvegicus]
gi|449081279|sp|P35284.2|RAB12_RAT RecName: Full=Ras-related protein Rab-12
Length = 243
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 43 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 100
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 160
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 137 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 194
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 195 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 248
>gi|255954027|ref|XP_002567766.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589477|emb|CAP95622.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|336289865|gb|AEI31006.1| PcvA [Penicillium chrysogenum]
Length = 205
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SGSYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEENKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|406867361|gb|EKD20399.1| ras-related protein-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 205
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A ++
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEENKRVISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|332225892|ref|XP_003262119.1| PREDICTED: ras-related protein Rab-12 [Nomascus leucogenys]
Length = 244
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 160
>gi|242000024|ref|XP_002434655.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497985|gb|EEC07479.1| RAS-related protein, putative [Ixodes scapularis]
Length = 216
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 10 KVILCG-EYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
KV+L G EYG GK+SL RY YD F S++ ++T+G K+ V +R I + +WDT G
Sbjct: 7 KVVLLGKEYG-GKTSLVERYLYDRFDSATPYQNTIGAAYGAKQIAVRNRKITLGIWDTAG 65
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN----- 123
ER +++ YY+ A AA++ F L + SF + E+ Y E +IFLCG
Sbjct: 66 SERYEAMSRIYYRSAGAAVVCFDLIDRESFQKAKFWVEELRKYEEKCQIFLCGTKKDLIK 125
Query: 124 --------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
E + + ++TS KTGEG+ ++F + +
Sbjct: 126 EEGRPRAVHWSDALEYADAIGAKLFETSSKTGEGIADLFCQVAEDYL 172
>gi|384945738|gb|AFI36474.1| ras-related protein Rab-12 [Macaca mulatta]
Length = 246
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 46 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 103
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 104 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 162
>gi|340502000|gb|EGR28722.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 175
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ D F + + +T+G+D + +D + +++Q+WDT G
Sbjct: 10 KLVIIGNSGVGKSSLLLRFSDDQF--NENYLTTIGVDFRFRTLNIDQKQVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGN----N 123
ER +ITS+YYK A+ ++V+ + N +SF + + + E+ +YAE N ++ L GN N
Sbjct: 68 ERFRTITSAYYKGADGIVIVYDVTNQSSFDDIDKFWISEVESYAEKNVEVLLIGNKIDLN 127
Query: 124 EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLI 156
Q N + Y + S KT + V+ F + R LI
Sbjct: 128 AQVSNEKAKEYAKNKNMEFFEASAKTSDTVQLAFLTLTRNLI 169
>gi|126321829|ref|XP_001364776.1| PREDICTED: ras-related protein Rab-12-like [Monodelphis domestica]
Length = 246
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 46 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 103
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 104 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 162
>gi|106507164|ref|NP_001020471.2| ras-related protein Rab-12 [Homo sapiens]
gi|114672319|ref|XP_001140752.1| PREDICTED: ras-related protein Rab-12 [Pan troglodytes]
gi|122064944|sp|Q6IQ22.3|RAB12_HUMAN RecName: Full=Ras-related protein Rab-12
gi|119622021|gb|EAX01616.1| hCG37212 [Homo sapiens]
gi|307684354|dbj|BAJ20217.1| RAB12, member RAS oncogene family [synthetic construct]
gi|410212514|gb|JAA03476.1| RAB12, member RAS oncogene family [Pan troglodytes]
gi|410255034|gb|JAA15484.1| RAB12, member RAS oncogene family [Pan troglodytes]
Length = 244
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 160
>gi|429327077|gb|AFZ78867.1| Ras-related protein [Coptotermes formosanus]
Length = 207
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 20/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+SL RY D F S + ST+G+D K ++D +++Q+WDT G
Sbjct: 15 KLILIGDSSVGKTSLIMRYIDDKF--SPNNLSTIGVDFKTKYLEIDGHQVKVQVWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA-KIFLCGNN----- 123
E+ +IT +YY+ + ++VF L N +F+ + L I + +A + LCGN
Sbjct: 73 EQFRAITRAYYRNSNGILIVFDLTNRETFNQVKVWLQSIHDVSVDAVDVILCGNKVDLER 132
Query: 124 -------EQCHNLISSTY-KTSCKTGEGVEEMFADIG----RQLILSNRSR 162
E+ +L S Y +TSCK G+ EMF ++ R+ I NR R
Sbjct: 133 AVSREEVEEFASLSSVPYFETSCKLNTGINEMFMELATRALRRKIEGNRMR 183
>gi|402902666|ref|XP_003914219.1| PREDICTED: ras-related protein Rab-12 [Papio anubis]
Length = 247
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 47 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 104
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 105 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 163
>gi|118138456|pdb|2IL1|A Chain A, Crystal Structure Of A Predicted Human Gtpase In Complex
With Gdp
Length = 192
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 28 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 85
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 86 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 145
>gi|106507168|ref|NP_077768.2| ras-related protein Rab-12 [Mus musculus]
gi|122065941|sp|P35283.3|RAB12_MOUSE RecName: Full=Ras-related protein Rab-12; AltName: Full=Rab-13
gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus]
gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct]
Length = 243
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 43 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 100
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 159
>gi|66472490|ref|NP_001018466.1| ras-related protein Rab-12 [Danio rerio]
gi|63100845|gb|AAH95608.1| Zgc:111945 [Danio rerio]
gi|182889626|gb|AAI65429.1| Zgc:111945 protein [Danio rerio]
Length = 235
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 9/131 (6%)
Query: 5 KVPEQ------KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRS 58
K+P + +VI+ G GVGK+SL R+ DTF + KST+G+D K ++ +
Sbjct: 26 KIPPRAADYKLQVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKK 83
Query: 59 IQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKI 117
I++Q+WDT G ER SITS+YY+ A+ +LV+ + +F L + + I YA E+A++
Sbjct: 84 IRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAEL 143
Query: 118 FLCGNNEQCHN 128
L GN C +
Sbjct: 144 LLVGNKLDCES 154
>gi|242022587|ref|XP_002431721.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212517036|gb|EEB18983.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++D+ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTLEIDNEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A ILV+ + +F L+ L EI YA + + L GN +
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLNDWLREIQEYASSKVLRILVGNKIDRED 126
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQL 155
T+ +TS K E VE++F +I +L
Sbjct: 127 REIPTHVGEDFAQRNSMYFIETSAKEAENVEKLFMEIAAEL 167
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 32/203 (15%)
Query: 1 MASIKVPEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD 56
MAS+ PE K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++
Sbjct: 1 MASMN-PEYDYLFKLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLNG 57
Query: 57 RSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENA 115
++I++Q+WDT G ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN
Sbjct: 58 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENV 117
Query: 116 KIFLCGN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNR 160
L GN E L +TS K+ VE+ F + ++ +
Sbjct: 118 NKLLVGNKCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEI----K 173
Query: 161 SRL-ELQTMGAGGIGTDSFKLGG 182
+R+ +Q +G G S ++GG
Sbjct: 174 NRMGPIQQVGTG----PSVRIGG 192
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 65 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 122
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 123 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 176
>gi|219879825|gb|ABW35313.2| Rab1A [Guillardia theta]
gi|428167960|gb|EKX36911.1| hypothetical protein GUITHDRAFT_97443 [Guillardia theta CCMP2712]
Length = 530
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R++ D F S+S ST+G+D + + D++I++Q+WDT G
Sbjct: 314 KIVLVGDSDVGKTSLLTRFSDDNF--SNSFISTIGVDFRWRTMSIKDKNIKLQIWDTAGQ 371
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN--AKIFLCGNN---- 123
ER +ITS+YY+ A+ ++V+ + N SF + + EI + ++ ++ + GN
Sbjct: 372 ERFRTITSAYYRGADGIVVVYDITNKESFDHVDMWMKEIHKFTDDNHVRVLVVGNKCDME 431
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
E C+ +TS KT V F D+ + IL NR +
Sbjct: 432 EKREIPTSLAREYCNQRGMKVVETSAKTATRVNTAFIDMAEE-ILENRQKF 481
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 27/190 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++ ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLNGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLII 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL-ELQTMGAGG 172
E L +TS K+ VE+ F + ++ ++R+ +Q +G G
Sbjct: 131 RRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEI----KNRMGPIQQVGTG- 185
Query: 173 IGTDSFKLGG 182
S ++GG
Sbjct: 186 ---PSVRIGG 192
>gi|156121229|ref|NP_001095762.1| ras-related protein Rab-12 [Bos taurus]
gi|151554332|gb|AAI49543.1| RAB12 protein [Bos taurus]
Length = 244
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 160
>gi|425772158|gb|EKV10572.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
Pd1]
gi|425777445|gb|EKV15619.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
PHI26]
Length = 205
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S S K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SGSYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPETF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDVEENKRMISSKRAMTFCHSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|443692874|gb|ELT94379.1| hypothetical protein CAPTEDRAFT_193005 [Capitella teleta]
Length = 198
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+V+L G+ VGK+ L R+ +TF+S S ST+G+D NK VD +++Q+WDT G
Sbjct: 8 QVMLIGDSAVGKTCLLVRFKDNTFLSGSF-ISTVGIDFRNKVVNVDGTKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQ--C 126
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + I L GN
Sbjct: 67 ERFRSVTHAYYRDANALLLLYDVTNKASFDNIRAWLAEINEYAQDDVVIMLLGNKSDMTS 126
Query: 127 HNLI-------------SSTYKTSCKTGEGVEEMFADIGRQL 155
L+ ++ +TS KTG VE F I R L
Sbjct: 127 ERLVRREDGERLAKEYGTAFMETSAKTGLNVELAFMAIARDL 168
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|240848863|ref|NP_001155439.1| rab6-like [Acyrthosiphon pisum]
gi|239788473|dbj|BAH70916.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 209
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLTD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL----ILSNRSRLELQ 166
+ L +TS K G V+++F + L + NR ++Q
Sbjct: 133 KRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDVAENRPPEDMQ 189
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 45 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 102
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 103 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 156
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 18 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 76 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 129
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 19/189 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S +T+G+D + K+D++++++Q+WDT G
Sbjct: 10 KLVLIGDSGVGKSCLLLRFADDAF--TESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+V+ + + SF ++ L E+ YA E L GN +
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDISD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ +Y +TS K + VEE F + +LI + R + AG
Sbjct: 128 NKAVSYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELI-TIREMVGDSNRPAGTK 186
Query: 174 GTDSFKLGG 182
T++ K GG
Sbjct: 187 LTENTKSGG 195
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 122
>gi|417408868|gb|JAA50968.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 32 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 89
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 90 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 148
>gi|167384673|ref|XP_001737050.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900326|gb|EDR26670.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 195
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 16/164 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGK+SL +RY F+ ST+G+D KE K+ + +++Q+WDT G
Sbjct: 10 KILMIGESSVGKTSLVKRYCEGIFLEE--MMSTVGIDFEFKELKIGETPVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN--NEQCH 127
ER ++TSSY++ I+V+ ++ +F L+ + E N++I + GN +++
Sbjct: 68 ERFHNVTSSYFRGTHGCIIVYDVNKLETFEKLNYWIEEYRDEQPNSEIIIVGNKIDKEMK 127
Query: 128 NLISST-----------YKTSCKTGEGVEEMFADIGRQLILSNR 160
L SS Y +S KTG+ VEE+F D+ IL N+
Sbjct: 128 VLESSAIQFANTRKARHYLSSAKTGQNVEEIFQDLAES-ILQNK 170
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|195127279|ref|XP_002008096.1| GI12014 [Drosophila mojavensis]
gi|193919705|gb|EDW18572.1| GI12014 [Drosophila mojavensis]
Length = 424
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 228 KVIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 286
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 287 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSS 346
Query: 127 ----------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
H++ +TS KTG VE F + RQL
Sbjct: 347 SERQVKREDGERLGREHDV--PFMETSAKTGLNVELAFTAVARQL 389
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 54 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 111
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 112 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 165
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKVIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + + + NR MG G +
Sbjct: 131 KKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAE--IKNR-------MGPGSV 181
Query: 174 GTDS 177
+ S
Sbjct: 182 PSGS 185
>gi|383856982|ref|XP_003703985.1| PREDICTED: ras-related protein Rab-26-like [Megachile rotundata]
Length = 300
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + +T+G+ NK VDD SI++Q+WDT G
Sbjct: 103 HKTILLGDSGVGKTSLLVQFDTKKF-QPGNFAATVGIGFTNKVVVVDDTSIKLQIWDTAG 161
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 162 QERFRSVTHAYYRDAQALLLLYDVTNKTSYDNIRAWLSEIREHAKEDVVIMLLGNKSDCG 221
Query: 128 N----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R+L
Sbjct: 222 TERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVAREL 264
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ustilago maydis 521]
gi|46101135|gb|EAK86368.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Ustilago maydis 521]
gi|343426390|emb|CBQ69920.1| probable GTPase Rab7 protein [Sporisorium reilianum SRZ2]
gi|388858528|emb|CCF47966.1| probable GTPase Rab7 protein [Ustilago hordei]
gi|443898215|dbj|GAC75552.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Pseudozyma
antarctica T-34]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F SS+ K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRF--SSAYKATIGADFLTREVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ L + ++NA SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCCLCYDVNNAKSFETLDSWRDEFLIQAAPHDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ ++S ++TS K VE+ F I R
Sbjct: 119 PFVVLGNKIDVEESKRMVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAR 173
>gi|442750387|gb|JAA67353.1| Putative rab24 member ras oncoprotein family [Ixodes ricinus]
Length = 197
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 10 KVILCG-EYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
KV+L G EYG GK+SL RY YD F S++ ++T+G K+ V +R I + +WDT G
Sbjct: 7 KVVLLGKEYG-GKTSLVERYLYDRFDSATPYQNTIGAAYGAKQIAVRNRKITLGIWDTAG 65
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN----- 123
ER +++ YY+ A AA++ F L + SF + E+ Y E +IFLCG
Sbjct: 66 SERYEAMSRIYYRNAGAAVVCFDLIDRESFQKAKFWVEELRKYEEKCQIFLCGTKKDLIK 125
Query: 124 --------------EQCHNLISSTYKTSCKTGEGVEEMFADIG 152
E + + ++TS KTGEG+ ++F +
Sbjct: 126 EEGRPRAVHWSDALEYADAIGAKLFETSSKTGEGIADLFCQVA 168
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + + +T+G+D K ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDTHIATIGVDFKIKTVQIDGKNIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER +ITSSYY+ A+ I+V+S+ + +F + Q L EI YA I L GN
Sbjct: 68 ERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLED 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
E ++L S + S K V+E+F I ++
Sbjct: 128 ERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIKIATDIM 170
>gi|380799405|gb|AFE71578.1| ras-related protein Rab-12, partial [Macaca mulatta]
Length = 222
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 22 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 80 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 138
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 65 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 122
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 123 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 176
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 6 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 64 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 117
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 116
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 116
>gi|403413298|emb|CCL99998.1| predicted protein [Fibroporia radiculosa]
Length = 231
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 18/171 (10%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
+S + K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++
Sbjct: 11 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKAMYLEDRTVRL 68
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLC 120
QLWDT G ER S+ SY + AI+VF + N SF S+ + ++ + + I L
Sbjct: 69 QLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGSDVIIVLV 128
Query: 121 GN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
GN N + L +TS K G V+ +F I +L+
Sbjct: 129 GNKADLSDKRQVMLEEANTKATQLEIMFMETSAKAGHNVKSLFKKIAMELV 179
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 19 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKVIKLQIWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 77 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 136
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + + + NR MG G +
Sbjct: 137 KKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAE--IKNR-------MGPGSV 187
Query: 174 GTDS 177
+ S
Sbjct: 188 PSGS 191
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 27/186 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ S + ST+G+D + +++ ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--SETYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQWLTEIERYACENVNKLLVGNKSDLQS 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
Y +TS K+ VE+ F + ++ ++R MG G
Sbjct: 128 KKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEI----KAR-----MGPAGA 178
Query: 174 GTDSFK 179
D+ K
Sbjct: 179 SNDTSK 184
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKSDLHT 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
Y +TS K VE+ F + ++ +SR+ + GA
Sbjct: 131 KKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI----KSRVGPPSSGA 183
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNNEQCH 127
ER S+ SY + + AI+V+ + SF + + + ++ T + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKSDLS 129
Query: 128 NLISST----------------YKTSCKTGEGVEEMFADIGRQL 155
+ T +TS K G V+ +F I + L
Sbjct: 130 DERQVTTEEGEAKAKELGATIFMETSTKAGHNVKNLFKKIAKSL 173
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 18/171 (10%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
+S + K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++
Sbjct: 12 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKAMYLEDRTVRL 69
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLC 120
QLWDT G ER S+ SY + AI+VF + N SF S+ + ++ + N I L
Sbjct: 70 QLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLV 129
Query: 121 GN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
GN N + L +TS K G V+ +F I L+
Sbjct: 130 GNKADLSDKRQVTLEEANAKAQELNIMFMETSAKAGHNVKSLFKKIAMSLV 180
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQWLQEIDRYACENVNKLLVGN 121
>gi|426254019|ref|XP_004020685.1| PREDICTED: ras-related protein Rab-12 [Ovis aries]
Length = 430
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 230 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 287
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 288 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 347
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 30 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 87
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 88 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 147
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K+ VE+ F + RQ+
Sbjct: 148 KKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 189
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC 126
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN QC
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQWLQEIDRYACENVNKLLVGN--QC 126
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans]
gi|259489719|tpe|CBF90222.1| TPA: Small GTPase AvaA [Source:UniProtKB/TrEMBL;Acc:Q8TGD9]
[Aspergillus nidulans FGSC A4]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S S K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKF--SGSYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
+ GN E+ +ISS ++TS K VE+ F I R
Sbjct: 119 PFVVIGNKIDMEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>gi|348557356|ref|XP_003464485.1| PREDICTED: ras-related protein Rab-12-like [Cavia porcellus]
Length = 248
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 48 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 105
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 106 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 164
>gi|148233560|ref|NP_001086132.1| RAB6B, member RAS oncogene family [Xenopus laevis]
gi|49257610|gb|AAH74238.1| MGC83971 protein [Xenopus laevis]
Length = 208
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ ++ Y +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQKAKDLNVMYIETSAKTGYNVKQLFRRVASAL 174
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 23/179 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDRYACENVNKLLVGNKSDLAA 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
Y +TS K VE+ F + ++ ++R+ TM +GG
Sbjct: 128 KKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEI----KNRMG-PTMASGG 181
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN ++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSDLND 127
Query: 129 LISSTYKTS 137
+ +Y T+
Sbjct: 128 NRAVSYDTA 136
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 22/164 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +C
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN--KCDL 125
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
NL +TS K+ VE+ F + ++
Sbjct: 126 TTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEI 169
>gi|85014405|ref|XP_955698.1| GTP-binding protein [Encephalitozoon cuniculi GB-M1]
gi|19171392|emb|CAD27117.1| RAS-RELATED PROTEIN GTP-BINDING PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449330264|gb|AGE96524.1| ras-related protein GTP-binding protein [Encephalitozoon cuniculi]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 27/187 (14%)
Query: 1 MASIKVPEQ-KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSI 59
MA++++ + K+I+ GE VGK+ L +Y D F S +T+G+D +K ++ ++I
Sbjct: 1 MAALRIDYRYKIIVLGESDVGKTCLLHKYKEDDF--KQSLMTTIGVDTVSKSIVLNGKNI 58
Query: 60 QMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL 119
+ +WDT G ER SIT SYY+ A+ +L+F + + +F + + I N +FL
Sbjct: 59 MLNIWDTAGQERFFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFL 118
Query: 120 CGNNE-----------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
GN + + + Y TS KTGE V +F D+ L
Sbjct: 119 VGNKRDKVDSAMYHEMEGRFKNKADEMRARYYTTSAKTGENVNNIFEDMAMVL------- 171
Query: 163 LELQTMG 169
L+ QT+G
Sbjct: 172 LKKQTLG 178
>gi|357619652|gb|EHJ72138.1| ras small monomeric GTPase Rab6 [Danaus plexippus]
Length = 208
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN------ 122
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ + L +TS K G V+++F + L
Sbjct: 133 KRQVSTEDGDRKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|325303662|tpg|DAA34344.1| TPA_inf: Rab6 subfamily protein [Amblyomma variegatum]
Length = 174
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T N I L GN +
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKTDLSD 132
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K+G V+++F + L
Sbjct: 133 KRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAAL 174
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 39 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 96
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 97 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 150
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K+ VE+ F + RQ+
Sbjct: 128 KKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 169
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN ++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSDLND 127
Query: 129 LISSTYKTS 137
+ +Y T+
Sbjct: 128 NRAVSYDTA 136
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R++ + ++ +T+G+D + V + +++ +WDT G
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN--NEQC 126
ER +ITSSYY+ A+ ILV+ + N SF L + E+ TY ++ + + GN +++
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFDALPKWFSELETYVSSSVVKIIVGNKVDKEY 134
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA--- 170
+S++ + S KT GV+E F D+ +++ + EL GA
Sbjct: 135 SRQVSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVERIMDTP----ELWQTGAARK 190
Query: 171 GGIGTDSFKLGGRGSE 186
GG G GGRG +
Sbjct: 191 GGSGKPGGASGGRGED 206
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 9 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA +N L GN H
Sbjct: 67 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKSDLHT 126
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
Y +TS K VE+ F + ++ +SR+ + GA
Sbjct: 127 KKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI----KSRVGPPSSGA 179
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 27 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 84
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 85 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 138
>gi|403072080|pdb|4FMD|F Chain F, Espg-Rab1 Complex Structure At 3.05 A
Length = 164
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 1 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 58
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 59 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 112
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|431896332|gb|ELK05748.1| Ras-related protein Rab-12 [Pteropus alecto]
Length = 246
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 46 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 103
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 104 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 163
>gi|145552226|ref|XP_001461789.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834332|emb|CAI44519.1| rab_B59 [Paramecium tetraurelia]
gi|124429625|emb|CAK94416.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 33/171 (19%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G VGKSSL RY DTF ST+G+D K K+D + I++Q+WDT G
Sbjct: 7 KIVIIGNSAVGKSSLLIRYCDDTF--RDIYLSTIGVDFRFKTIKLDGQGIKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYA-ENAKIFLCGNN---- 123
ER +IT+SYYK A+ ++V+ + NA SF ++++ + E+ YA +N K+ L GN
Sbjct: 65 ERFRNITNSYYKGAQGIVIVYDVTNAKSFEDVTKYWMAELSHYADQNVKLMLLGNKIDMA 124
Query: 124 ------------EQC-------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
EQ H+L+S+ KT E VE F ++ R +
Sbjct: 125 TEETRQVSQEMAEQLSKEFNMQHHLVSA------KTAEEVENAFLNLARSI 169
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 18/179 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + + EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKTDLTS 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
TY +TS K VE+ F ++ ++ ++ + GAG
Sbjct: 128 KKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQPNRSGAGA 186
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
Length = 207
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 20/173 (11%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M++ + + K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I+
Sbjct: 1 MSNKTLTKYKIVFLGEQGVGKTSLITRFMYDTF--DEHYQATIGIDFLSKTMYLDDKTIR 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
+QLWDT G ER S+ SY + + AI+V+ + SF + + + ++ + + LC
Sbjct: 59 LQLWDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIQDVKNERGDDGVILC 118
Query: 121 --GN-----------NEQCHN---LISST--YKTSCKTGEGVEEMFADIGRQL 155
GN NE+ N L+ + +TS K G V+ +F I + L
Sbjct: 119 IVGNKSDLSDQRQVSNEEGENKAKLLGADIFMETSTKAGYNVKNLFKKIAKSL 171
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMG 169
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVELYNDF 186
Query: 170 AGGIGTDSFKLGG 182
G I KLGG
Sbjct: 187 PGPI-----KLGG 194
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--- 125
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
Query: 126 ---CHNLISSTY---------KTSCKTGEGVEEMFADIGRQL 155
+ I++ Y +TS K+ VE+ F + ++
Sbjct: 131 KKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEI 172
>gi|440803097|gb|ELR24009.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 231
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 27/177 (15%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGKS L +R + S+S + T+G D K+ + +++Q+WDTGG+
Sbjct: 17 KVVLLGTAGVGKSGLLQRARNGEWHSAS--EPTVGADFCQKDMS---QLVRLQIWDTGGL 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG------NN 123
ER S+T YY+ A A +LV+ + N SF L + L E+ + + I + N
Sbjct: 72 ERYRSLTPMYYRGAHACLLVYDVSNRDSFADLVRWLAEVRVGSPASIIAVVAAKCDIPAN 131
Query: 124 EQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQT 167
EQ L++ST Y+TS K+GEGV+EMFA + L +LE
Sbjct: 132 EQ---LVTSTEAEAWCAQENLRHYRTSAKSGEGVDEMFAQLAEDLPSQTPEKLEFPP 185
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 72 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 131
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K+ VE+ F + RQ+
Sbjct: 132 KKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 173
>gi|221503772|gb|EEE29456.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 481
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ VGKS L R+A F+ ++TLG+D + VD R +++QLWDT G
Sbjct: 229 KLLIIGDSCVGKSCLLSRFARGRFLPH---RTTLGVDFETRTLDVDGRRVKIQLWDTAGH 285
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T SYY+ A A++VF + SF + L E+ A +N + L GN N
Sbjct: 286 ERFRSVTLSYYRSAMGALVVFDITKRESFESVQSWLRELEDRAPQNVQKVLVGNKADVEN 345
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
S +TS KTG+ V F D+ Q++ R +LELQ
Sbjct: 346 RAVSREEARRLAGEHNLHYIETSAKTGQHVRTAFVDLTLQVLRCLR-QLELQ 396
>gi|221485861|gb|EEE24131.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 457
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ VGKS L R+A F+ ++TLG+D + VD R +++QLWDT G
Sbjct: 205 KLLIIGDSCVGKSCLLSRFARGRFLPH---RTTLGVDFETRTLDVDGRRVKIQLWDTAGH 261
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T SYY+ A A++VF + SF + L E+ A +N + L GN N
Sbjct: 262 ERFRSVTLSYYRSAMGALVVFDITKRESFESVQSWLRELEDRAPQNVQKVLVGNKADVEN 321
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
S +TS KTG+ V F D+ Q++ R +LELQ
Sbjct: 322 RAVSREEARRLAGEHNLHYIETSAKTGQHVRTAFVDLTLQVLRCLR-QLELQ 372
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 9 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + +F+ + Q L EI YA EN L GN
Sbjct: 67 ERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGN 120
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N ASF ++ + ++ + + I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGNKADLSD 138
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
T+ +TS K G V+ +F I L
Sbjct: 139 KRQVTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|340502549|gb|EGR29228.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 219
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ VGK+S+ R+ YD F + S + T+G+D K +D++++++QLWDT G
Sbjct: 14 KIVFLGDQSVGKTSIINRFIYDNF--TGSEQPTVGIDFICKTLTLDNKTLRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNN----- 123
ER S+ SY + + AAI+V+ + N ASF+ L++ + E+ N A IF+ GN
Sbjct: 72 ERFKSLIPSYIRDSNAAIIVYDVTNQASFNNLTKWIEEVKEERGNDALIFVLGNKADLED 131
Query: 124 -----EQCHNLISS----TYKTSCKTGEGVEEMFADIGRQL 155
E+C + + S K+G+ + F + + L
Sbjct: 132 RKVSAEECQQQLKQFNLKLQEVSAKSGQNIGTFFKQLAQSL 172
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF + Q + EI Y AE L GN
Sbjct: 72 ERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQWMQEIDRYAAEGVNKLLVGNKSDLTD 131
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
NE ++ S +TS K VE+ F + +Q+
Sbjct: 132 KKAVSTEQANEFAESIKISLLETSAKDATNVEQAFLTMAKQI 173
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER ++TSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>gi|261191069|ref|XP_002621943.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239590987|gb|EEQ73568.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239613100|gb|EEQ90087.1| GTPase Rab7 [Ajellomyces dermatitidis ER-3]
gi|327354859|gb|EGE83716.1| vacuolar biogenesis protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y + SSS K+T+G D K+ VDDR +
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKY--SSSYKATIGADYLTKDVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
+QLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F +I + ++
Sbjct: 119 PFVVLGNKIDVEESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 23/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGCGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNITIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGNN---- 123
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDIERYATSNVSKLLIGNKIDLA 126
Query: 124 -------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ HN+ + + S KT VE+ F I + L
Sbjct: 127 DNRVVTSEEAKQVAEAHNM--NYIEASAKTDSNVEKAFLSIAKSL 169
>gi|391348759|ref|XP_003748610.1| PREDICTED: ras-related protein Rab-6A-like [Metaseiulus
occidentalis]
Length = 207
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGTDVIIMLVGNKTDLSE 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS K+G V+++F + L
Sbjct: 132 KRQVSTEDGEKKAKELQVMFIETSAKSGYNVKQLFRRVANAL 173
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGN 121
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + +F+ + Q L EI YA EN L GN
Sbjct: 70 ERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGN 123
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 911 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 968
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 969 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 1028
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K VE+ F + RQ+
Sbjct: 1029 KKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 1070
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + + +T+G+D + +VD +++Q+WDT G
Sbjct: 6 KLLIIGDSGVGKSSLLLRFADNTF--TGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHN- 128
ER +ITS+YY+ I+V+ + N SF + + L EI E L GN C +
Sbjct: 64 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCEVVNRILVGNKNDCPDR 123
Query: 129 --------------LISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
+ S ++TS K VEEMF + + ++ + + + + Q
Sbjct: 124 KVVLYEDAKRFADQMTISLFETSAKDNINVEEMFTVMTKMVLQTKKEQKDRQ 175
>gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6 [Bombyx mori]
gi|87248577|gb|ABD36341.1| ras small monomeric GTPase Rab6 [Bombyx mori]
Length = 209
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN------ 122
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+++ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|291510246|gb|ADE10079.1| Rab7 [Tremella fuciformis]
Length = 206
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRF--SNQYKATIGADFLTRELVVDDRVVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++++ SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ ++S ++TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDMEESKRMVSQKRAMTWCQAKSNIPYFETSAKEAINVEQAFQTIAKN-ALA 177
Query: 159 NRSRLELQTMGAGGIGTDS 177
+ EL T I DS
Sbjct: 178 QEAEAELYTDYPDPIRIDS 196
>gi|270005194|gb|EFA01642.1| hypothetical protein TcasGA2_TC007212 [Tribolium castaneum]
Length = 184
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K VD+ +++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVDVDNEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A ILV+ + +F L L EI YA + + L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASSKVLRVLVGNKIDRED 126
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ HN+ +TS K E VE +F I L+
Sbjct: 127 REIPTHVGEEFAERHNM--YFLETSAKEAENVERLFMQIAEDLM 168
>gi|50292103|ref|XP_448484.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527796|emb|CAG61445.1| unnamed protein product [Candida glabrata]
Length = 219
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF + ++T+G+D +K +DD++I++QLWDT G
Sbjct: 13 KIVFLGEQGVGKTSLITRFMYDTF--DDNYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY--AENAKIFLCGNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ AEN + + GN
Sbjct: 71 ERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGAENVILCVVGNKSDLA 130
Query: 124 -----------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
++ +L + + +TS K G V+ +F I + L
Sbjct: 131 DERQVTAEEGEKKAQDLGAKIFMQTSTKVGYNVKNLFKKIAKSL 174
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + +F+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGN 124
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + +F+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGN 124
>gi|427787277|gb|JAA59090.1| Putative rab-protein 6 [Rhipicephalus pulchellus]
Length = 208
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T N I L GN +
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKTDLSD 132
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K+G V+++F + L
Sbjct: 133 KRQVTTEDGERKAKELNVMFIETSAKSGYNVKQLFRRVAAAL 174
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 71 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K+ VE+ F + RQ+
Sbjct: 131 KKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 172
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 18/178 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--NESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-NEQCH 127
ER +ITSSYY+ A I+V+ + + SF+ + L EI YA E+ L GN N+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANESVNKLLVGNKNDLTT 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAG 171
+ T +TS KT E VE+ F + +++ S+ + Q +G
Sbjct: 128 KKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQPQTQKTSSG 185
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 59 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 116
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 117 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 170
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + +VD +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--------------VTYAENA 115
ER +ITS+YY+ I+V+ + + +F + + L EI A N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQ 127
Query: 116 KIFLCGNNEQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
K+ L + ++ N + ++TS K VEEMF I RQ++ + + R E Q +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAI 181
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 41 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 98
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 99 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 158
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K+ VE+ F + RQ+
Sbjct: 159 KKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 200
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 92
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 93 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 146
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++NA SF L E + A N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K +++ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRVISNKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R++ + ++ +T+G+D + +V+ R +++ +WDT G
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN---NEQ 125
ER +ITSSYY+ A+ ILV+ + N +F L + EI TY + + GN E
Sbjct: 80 ERFRTITSSYYRGAQGIILVYDVSNRETFEALPRWFSEIETYVSPTVVRIIVGNKLDKEN 139
Query: 126 CHNLISST------------YKTSCKTGEGVEEMFADIGRQLI 156
+ +S + S KT GV E F D+ R ++
Sbjct: 140 SRQVPTSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHIL 182
>gi|291241694|ref|XP_002740747.1| PREDICTED: RAB30, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 202
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 24/165 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++ D +++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVQIGDDKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A+A ++V+ + + SF L + EI YA N I L GN +
Sbjct: 67 ERFRSITQSYYRSADALVVVYDVTSFESFRCLPDWIKEIEQYASNKAITVLVGNKT---D 123
Query: 129 LI-------------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
LI +ST+ +TS K + V+++F DI +L
Sbjct: 124 LIEDREVSLDNGTNFASTHEMRFLETSAKEADNVDKLFLDIAEEL 168
>gi|410923859|ref|XP_003975399.1| PREDICTED: ras-related protein Rab-12-like [Takifugu rubripes]
Length = 242
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++I+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QIIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ +LV+ + SF L + + I YA E A++ L GN C +
Sbjct: 102 ERFNSITSAYYRGAKGIVLVYDITKLESFDDLPKWMKMIDKYASEEAELLLVGNKLDCES 161
>gi|410896218|ref|XP_003961596.1| PREDICTED: ras-related protein Rab-26-like [Takifugu rubripes]
Length = 254
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ S ST+G+D NK +D +++Q+WDT G
Sbjct: 63 KVMLVGDSGVGKTCLLVRFKDGAFLAGSF-ISTVGIDFRNKVMSIDAVKVKLQIWDTAGQ 121
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA ++ + L GN + H
Sbjct: 122 ERFRSVTHAYYRDANALLLLYDVSNKASFDNIRAWLTEIHEYAQQDVVVMLLGNKADSTH 181
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
N + +TS K+G VE F + ++L
Sbjct: 182 NRVVRREEGEKLAKEFGVPFMETSAKSGLNVELAFTAVAKEL 223
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 24/168 (14%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
+ K+I G+ VGK+ + R+ YD F S T+G+D K K+DD++I++QLWDT
Sbjct: 21 KHKIIFLGDQYVGKTCIIERFMYDVFDEKSH--PTVGVDFLAKSIKLDDKNIRLQLWDTA 78
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN----AKIFLCGNN 123
G ER S+ SY + A AI+VF + N SF+ + + L + Y +N A L GN
Sbjct: 79 GQERFRSLIPSYLRDATCAIIVFDVTNKESFNNIERWLKD---YRDNRGNDASCVLIGNK 135
Query: 124 --------------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
E+ +++ Y S KTGE V+ MF + + LI
Sbjct: 136 IDMKQIREISQQQAEEKGKMLNMLYFDISAKTGENVQNMFLTMAKSLI 183
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 22/175 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDLTA 127
Query: 127 HNLIS-------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+ ++S +TS K+ VE+ F + ++ ++R+ Q M
Sbjct: 128 NKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEI----KNRMATQPM 178
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+VF + + SF+ + Q L EI YA EN L GN
Sbjct: 70 ERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQWLNEIDRYANENVNKLLVGN 123
>gi|241723781|ref|XP_002404303.1| RAS-related protein, putative [Ixodes scapularis]
gi|215505389|gb|EEC14883.1| RAS-related protein, putative [Ixodes scapularis]
gi|346471859|gb|AEO35774.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T N I L GN +
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKTDLSD 132
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K+G V+++F + L
Sbjct: 133 KRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAAL 174
>gi|260801213|ref|XP_002595490.1| hypothetical protein BRAFLDRAFT_69124 [Branchiostoma floridae]
gi|229280737|gb|EEN51502.1| hypothetical protein BRAFLDRAFT_69124 [Branchiostoma floridae]
Length = 336
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ + R+ F+S S ST+G+D NK VD +++Q+WDT G
Sbjct: 165 KVMLIGDSGVGKTCVLVRFKDGAFLSGSF-ISTVGIDFRNKVVNVDGAKVKLQIWDTAGQ 223
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T +YY+ A A +L++ + N SF + L EI YA ++ I L GN +
Sbjct: 224 ERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLSEIHEYAQQDVVIMLLGNKD---- 279
Query: 129 LISSTYKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG VE F + + L
Sbjct: 280 FGIAFMETSAKTGLNVELAFMAVAKDL 306
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGE 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 8 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 66 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 119
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+V+ + N ASF S+ + ++ + N I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
T+ +TS K G V+ +F I L
Sbjct: 139 KRQVTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMAL 180
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S ST+G+D + +++ + +++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFAEDAF--TDSYLSTIGVDFKIRTIELEGKMVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +I ++YY+ A ++V+ + +A SF + L EI YA EN K L GN
Sbjct: 68 ERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYASENVKKLLIGNKSDLVE 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS KT VEE F + +Q+ + +++ A
Sbjct: 128 RKVVAYGSAKEFADELAIPFIETSAKTSSNVEEAFLTMSKQI----KESVDIAPEPAANA 183
Query: 174 GTDSFKLGGRGSEE 187
GRG EE
Sbjct: 184 SKAGTVTPGRGLEE 197
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 24/174 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR + MQLWDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVTMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++NA SF L E + A N + GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKI 128
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
E+ +IS+ ++TS K +++ F I R + S
Sbjct: 129 DVEESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQEES 182
>gi|242005911|ref|XP_002423803.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507019|gb|EEB11065.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 209
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS K G V+++F + L
Sbjct: 133 KRQVSSEEGVKKAKELNVKFIETSAKAGYNVKQLFRRVAAAL 174
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 28/192 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTITLENKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF + Q + EI YA EN L GN +C +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGN--KC-D 124
Query: 129 LISSTY------------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
L+S +TS K VE+ F + ++ + R++L
Sbjct: 125 LVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEI----KKRVQLNNQNT 180
Query: 171 GGIGTDSFKLGG 182
G+ KL G
Sbjct: 181 KGVTQQGPKLAG 192
>gi|134024040|gb|AAI35229.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 274
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 74 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 131
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E A++ L GN C
Sbjct: 132 ERFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCET 191
>gi|395857340|ref|XP_003801056.1| PREDICTED: ras-related protein Rab-12 [Otolemur garnettii]
Length = 234
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 34 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 91
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 92 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 150
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 22/173 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + + +T+G+D K ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER +ITSSYY+ A+ I+V+S+ + +F + Q L EI YA I L GN
Sbjct: 68 ERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLDD 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMF----ADIGRQLILSNRSR 162
E ++L S + S K V+E+F DI + + +N S+
Sbjct: 128 ERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIRIATDIMKNIQPANTSK 180
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDMET 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E L +TS K VE+ F + ++
Sbjct: 131 KKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|407038920|gb|EKE39375.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 194
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ GE VGK+++ RY D F ST+G+D +K KV D +I++QLWDT G
Sbjct: 10 KVLIIGEPSVGKTAIMERYCEDKF--HDELISTIGVDFNSKLVKVGDLTIKLQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER ++TSSYYK + ++V+ + + SF+ ++ + E E A I + GN +
Sbjct: 68 ERFRNVTSSYYKGTQGCLVVYDVSDIESFNKITHWIQEYQIEQEIAFIIIVGNKIDLPSK 127
Query: 130 ISST-------------YKTSCKTGEGVEEMFADIGR 153
+++ + S KTGEGV E+F + +
Sbjct: 128 VTTEQADAAAKEQGYQHMRCSAKTGEGVNEIFETLAK 164
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +A SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKSDLTA 127
Query: 129 LISSTYKTS 137
+ Y+T+
Sbjct: 128 KRAVDYETA 136
>gi|91089681|ref|XP_974614.1| PREDICTED: similar to Rab-protein 6 CG6601-PA [Tribolium castaneum]
gi|270012633|gb|EFA09081.1| hypothetical protein TcasGA2_TC006800 [Tribolium castaneum]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 102/188 (54%), Gaps = 24/188 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ ++ YD+F ++ ++T+G+D +K + D+++++QLWDT G
Sbjct: 18 KLVFLGEQSVGKTSIITKFMYDSF--DTAYQATVGIDFLSKTMYLTDKTVRLQLWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNN----- 123
ER S+ +Y + + A++VF + N +FH ++ + ++ + ++ +FL GN
Sbjct: 76 ERFRSLIPAYIRDSSVAVVVFDVTNIETFHQTTKWINDVRMERGDSVIVFLVGNKVDLKD 135
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLIL------SNRSRLELQT 167
EQ ++ T+ +TS K G ++++F I L++ N S L+ +
Sbjct: 136 LRQVSIEEGEQKAKELNVTFVETSAKVGLNIKQLFKRITESLVVCEEPKSDNSSELQEVS 195
Query: 168 MGAGGIGT 175
+G G+ T
Sbjct: 196 LGKNGLVT 203
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F +S K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--TSQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGN-- 122
ER S+ ++Y+ A+ +LV+ + NA +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDPENFPFVVIGNKI 127
Query: 123 ---NEQ-----CHNLISST-----YKTSCKTGEGVEEMFADIGRQ-LILSNRSRLELQTM 168
N Q N S Y+TS K V++ F I R L N + Q
Sbjct: 128 DLENRQVPARRAQNWCESKNNIPYYETSAKEAVNVDQAFQKIARDALAKENDDIYKPQVA 187
Query: 169 GAGGIGTDS 177
I DS
Sbjct: 188 SVPDIRLDS 196
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL ++Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMKQYVDKEF--SASYKATIGADFSTKEVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++NA SF L E + A N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN ++ +IS+ ++TS K V++ F I R +
Sbjct: 119 PFVVIGNKIDVDESKRVISNKRAMTFCQSKGDIPYFETSAKEAINVDQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|1710015|sp|P51152.1|RAB12_CANFA RecName: Full=Ras-related protein Rab-12
gi|437985|emb|CAA80471.1| Rab12 protein [Canis lupus familiaris]
Length = 208
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 8 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 66 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 124
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S + +T+G+D + ++ + +++Q+WDT G
Sbjct: 15 KLLIIGDSGVGKSSLLLRFADNTF--SPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ---- 125
ER +ITS+YY+ I+V+ + + SF + + L EI T EN + L GN
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPER 132
Query: 126 -----------CHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ ++TS K VEEMF I R L+L + R + G G
Sbjct: 133 RVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITR-LVLEAKLRAPQTNIADSGSG 191
Query: 175 TDSFKLGG 182
+LGG
Sbjct: 192 V---RLGG 196
>gi|407044411|gb|EKE42576.1| Ras family protein [Entamoeba nuttalli P19]
Length = 243
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ GE VGK+ RY + F + K+T+G+ +KE +V+ + I++Q+WDT G
Sbjct: 58 KVIMVGESSVGKTCCMNRYVSNEFAEQT--KATIGVGVGSKEVEVEGKQIKLQIWDTAGQ 115
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER A++T +Y++ A AAI++F + N SF + + + IF+ GN +
Sbjct: 116 ERFATLTGNYFRNAMAAIIMFDVSNKESFENIPNWVEQCCKCDGKHIIFIAGNKIDLEDR 175
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ S ++ S KTG+G+E++F ++ ++++
Sbjct: 176 VVSKEEAEEKAKELKLKYFEVSAKTGDGIEDLFNELIKEIM 216
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + +A SF+ + Q L EI Y AE L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDRYAAEGVNKLLVGNKSDLVD 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E L +TS K VE+ F + +Q+
Sbjct: 128 KKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQI 169
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-NEQCH 127
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN N+
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTS 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ ST +TS K VEE F + ++ + + + AGG
Sbjct: 128 QKVVSTETAKAFADELGIPFLETSAKNATNVEEAF------MAMTAAIKTRMASQPAGGA 181
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 182 KPPTVQIRGQ 191
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTS 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
Y +TS K VE+ F + + + NR + AGG
Sbjct: 128 KKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAE--IKNRMASQPIPTKAGG 184
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 8 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 66 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 119
>gi|366992854|ref|XP_003676192.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
gi|342302058|emb|CCC69831.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
Length = 222
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNNEQCH 127
ER S+ SY + + AI+V+ + SF + + + ++ + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKNERGDDNVILCIVGNKSDLS 129
Query: 128 NLISST----------------YKTSCKTGEGVEEMFADIGRQLI-LSNRSRLELQTMGA 170
+ T +TS K G V+ +F I + L N L T G
Sbjct: 130 DERQVTIEEGENKAKILGADIFMETSTKAGYNVKNLFKKIAKSLPEFQNSDTNPLDTDGN 189
Query: 171 G 171
G
Sbjct: 190 G 190
>gi|401412488|ref|XP_003885691.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325120111|emb|CBZ55665.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 244
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
+ P K +L G+ VGKSSL R+ +TF S + ++T+G F + +VD R+++ ++W
Sbjct: 38 RPPSYKTVLLGDASVGKSSLVVRFVKNTF--SDTMETTIGAAFFTQALQVDGRTVKFEIW 95
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASF---HVLSQHLLEIVTYAENAKIFLCG 121
DT G ER +S+ YY+ A AAI+V+ N ASF V Q L ++ N I L
Sbjct: 96 DTAGQERFSSLAPMYYRGAAAAIVVYDQSNMASFDRAQVWVQQLQ--LSGNSNIVIALAA 153
Query: 122 N-----NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQL 155
N ++Q + Y +TS KTG+ V+++F+ I R+L
Sbjct: 154 NKMDLPHKQVDLNLGRQYAEENGLLFIETSAKTGQNVQQLFSMIARRL 201
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S + +T+G+D + ++ + +++Q+WDT G
Sbjct: 15 KLLIIGDSGVGKSSLLLRFADNTF--SPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ---- 125
ER +ITS+YY+ I+V+ + + SF + + L EI T EN + L GN
Sbjct: 73 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPER 132
Query: 126 -----------CHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ ++TS K VEEMF I R L+L + R + G G
Sbjct: 133 RVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITR-LVLEAKLRAPQPNIADSGGG 191
Query: 175 TDSFKLGG 182
+LGG
Sbjct: 192 V---RLGG 196
>gi|193652503|ref|XP_001951946.1| PREDICTED: ras-related protein Rab-35-like [Acyrthosiphon pisum]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S S +T+G+D + VD +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLVRFADNTF--SGSYITTIGVDFKIRTVIVDGEKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI E L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVSNGDSFANVKRWLHEIDQNCEVVNRILVGNKNDAPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
+ T Y+TS K VE+MF I +Q++ + + E Q
Sbjct: 128 KVVLTEDAQRFADQMGIQLYETSAKDNINVEQMFMSITKQVLRNKKETKERQ 179
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + + +T+G+D K ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER +ITSSYY+ A+ I+V+S+ + +F + Q L EI YA I L GN
Sbjct: 68 ERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLED 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
E ++L S + S K V+E+F I ++
Sbjct: 128 ERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIM 170
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGKSS+ R+ D F + T+G+D K+ VDD ++++ +WDT G
Sbjct: 10 KILIIGESGVGKSSILVRFTEDNF--DPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGN 122
ER ++T SYY+ A+ AILV+ + N ++F L L E+ TY+ A I + GN
Sbjct: 68 ERFRTLTPSYYRDAQGAILVYDVTNYSTFAKLETWLNELETYSTKANIVKMIVGN 122
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+A D F S +ST+G++ K +VDD+ ++ Q+WDT G
Sbjct: 16 KVVLIGDSGVGKSNLLSRFARDEF--SLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A++V+ + +F + L E+ + + N + L GN +
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGNKADLRH 133
Query: 129 L--ISS-------------TYKTSCKTGEGVEEMFADIGRQL 155
L +S + +TS VE FA++ RQ+
Sbjct: 134 LRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQI 175
>gi|301616136|ref|XP_002937521.1| PREDICTED: ras-related protein Rab-12 [Xenopus (Silurana)
tropicalis]
Length = 345
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 145 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 202
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E A++ L GN C
Sbjct: 203 ERFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCET 262
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL------ILSNRSRLELQT 167
Y +TS K VE+ F + RQ+ +N ++ +Q
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSTTANNTKPSVQV 187
Query: 168 MGAGGIGTDS 177
G+ ++S
Sbjct: 188 GPGHGVSSNS 197
>gi|395333800|gb|EJF66177.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 214
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 18/171 (10%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
+S + K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++
Sbjct: 12 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKAMYLEDRTVRL 69
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLC 120
QLWDT G ER S+ SY + AI+VF + N SF S+ + ++ + N I L
Sbjct: 70 QLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLV 129
Query: 121 GN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
GN N + L +TS K G V+ +F I L+
Sbjct: 130 GNKADLSDKRQVTLEEANAKATQLNIMFMETSAKAGHNVKSLFKKIAMSLV 180
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|255712777|ref|XP_002552671.1| KLTH0C10384p [Lachancea thermotolerans]
gi|238934050|emb|CAR22233.1| KLTH0C10384p [Lachancea thermotolerans CBS 6340]
Length = 234
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 35 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 92
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNNEQCH 127
ER S+ SY + + AI+V+ + N SF + + + ++ + + LC GN
Sbjct: 93 ERFRSLIPSYIRDSHVAIVVYDVTNKKSFEYIDKWVEDVKSERGEENVVLCIVGN----K 148
Query: 128 NLISSTYKTSCKTGE 142
N +S + S + GE
Sbjct: 149 NDLSDERQVSTEEGE 163
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGNN-EQC 126
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN +
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVCKLLIGNKIDLA 126
Query: 127 HNLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
N + ST + S KT VE+ F I + L
Sbjct: 127 ENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAFITIAKAL 169
>gi|403265469|ref|XP_003924959.1| PREDICTED: ras-related protein Rab-12 [Saimiri boliviensis
boliviensis]
Length = 263
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 63 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 120
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 121 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 180
>gi|391338263|ref|XP_003743479.1| PREDICTED: ras-related protein Rab-30-like [Metaseiulus
occidentalis]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +VD +++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGMF--PPGQGATIGVDFLIKTVEVDGDKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNNEQCH 127
ER SIT SYY+ A A +LV+ + + +F L L EI YA + K+ + GN
Sbjct: 67 ERFRSITQSYYRSAHALVLVYDISSQPTFDCLPDWLREIEQYA-SPKVLRAVVGNKIDRD 125
Query: 128 NLISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRS 161
+ T+ +TS K + VE++F +I +L R+
Sbjct: 126 DREIPTHIGEEFARRNDMYFIETSAKEADNVEKLFTEIAHRLTQEARA 173
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + VD +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVDVDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--------------VTYAENA 115
ER +ITS+YY+ I+V+ + + SF + + L EI A N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNE 127
Query: 116 KIFLCGNNEQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
K+ L + ++ N + ++TS K V+EMF I RQ++ + + R E Q +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNVNVQEMFMAITRQVLRTKKERKERQAI 181
>gi|145483363|ref|XP_001427704.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834296|emb|CAI44508.1| rab_C23 [Paramecium tetraurelia]
gi|124394787|emb|CAK60306.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGK+ L RY + F +++ +T+G+D K +V + +++Q+WDT G
Sbjct: 13 KLLIIGDSGVGKTCLLMRYCENLF--TNNHLTTIGIDFKLKTIEVGGKKVKIQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +IT +YYK A+ ILV+ +D+ SF + + +I T+A E L N C +
Sbjct: 71 ERFRTITQTYYKGAQGIILVYGVDDRVSFQSIENWMKQINTHAQEGVSKLLVANKSDCAD 130
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T ++TS K G + E+F I + +I
Sbjct: 131 RVVQTQEGQRLADQYGIPFFETSAKNGTNIYEIFNSIAKMVI 172
>gi|195441269|ref|XP_002068437.1| GK20471 [Drosophila willistoni]
gi|194164522|gb|EDW79423.1| GK20471 [Drosophila willistoni]
Length = 194
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 22/164 (13%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
VI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G E
Sbjct: 1 VIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 59
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC--- 126
R S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 60 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSSS 119
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 120 ERQVKREDGERLGREHNV--PFMETSAKTGLNVELAFTAVARQL 161
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + ++D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVEIDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--------------VTYAENA 115
ER +ITS+YY+ I+V+ + + +F + + L EI A N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQ 127
Query: 116 KIFLCGNNEQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
K+ L + ++ N + ++TS K VEEMF I RQ++ + + R E Q +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAI 181
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
+ Y +TS K VE+ F + RQ+
Sbjct: 128 KKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|321471489|gb|EFX82462.1| hypothetical protein DAPPUDRAFT_128059 [Daphnia pulex]
Length = 208
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKARELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|326917471|ref|XP_003205022.1| PREDICTED: ras-related protein Rab-12-like [Meleagris gallopavo]
Length = 262
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 62 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 119
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 120 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 178
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S + +T+G+D + ++ + +++Q+WDT G
Sbjct: 42 KLLIIGDSGVGKSSLLLRFADNTF--SPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQ 99
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ---- 125
ER +ITS+YY+ I+V+ + + SF + + L EI T EN + L GN
Sbjct: 100 ERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPER 159
Query: 126 -----------CHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ ++TS K VEEMF I R L+L + R + G G
Sbjct: 160 RVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITR-LVLEAKLRAPQPNIADSGGG 218
Query: 175 TDSFKLGG 182
+LGG
Sbjct: 219 V---RLGG 223
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + ++ + Q L EI YA +N L GN N
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQWLQEIDRYASDNVNKLLVGNKSDRTN 128
Query: 129 ------LISSTY---------KTSCKTGEGVEEMFADIGRQL 155
++S + +TS KT VE+ F + R++
Sbjct: 129 EKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREI 170
>gi|318054582|ref|NP_001187853.1| ras-related protein Rab-6B [Ictalurus punctatus]
gi|308324148|gb|ADO29209.1| ras-related protein rab-6b [Ictalurus punctatus]
Length = 208
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF + S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDVTNVNSFQLTSKWIEDVRTERGSDVIIMLVGNKTDLEE 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS KTG V+++F + L
Sbjct: 133 KRQILVEEGEQRAKELNVMFIETSAKTGTNVKQLFRRVAAAL 174
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 27/190 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIEMEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDLSS 127
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E +L +TS K VE+ F + ++ + +GA +
Sbjct: 128 KKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLAMASEI---------QKRIGADSV 178
Query: 174 GTDSFKLGGR 183
++ K+G +
Sbjct: 179 QNETVKIGSK 188
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S +T+G+D + K+D++++++Q+WDT G
Sbjct: 10 KLVLIGDSGVGKSCLLLRFADDAF--TESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+V+ + + SF ++ L E+ YA E L GN +
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKSDISD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
+Y +TS K + VEE F + +LI
Sbjct: 128 NKVVSYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELI 170
>gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|110645498|gb|AAI18790.1| rab6b protein [Xenopus (Silurana) tropicalis]
Length = 208
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS KTG V+++F + L
Sbjct: 133 KRQITIEAGEQKAKELNVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DDR+I++QLWDT G
Sbjct: 14 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTVYLDDRTIRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
ER S+ SY + + AI+V+ + N SF + + + ++ + LC
Sbjct: 72 ERFRSLIPSYIRDSHVAIVVYDITNKKSFEYIDKWVEDVRNERGEENLILC 122
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S++ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVGN 121
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGN 124
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTVDLDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+V+ + SF+ L Q L E+ YA EN L GN +E
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQWLEEVDRYACENVNKLLVGNKCDEVT 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
++ T +TS K VE+ F + ++
Sbjct: 128 KKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEI 169
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + S++ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + ++
Sbjct: 128 KKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|380030493|ref|XP_003698882.1| PREDICTED: ras-related protein Rab-26-like [Apis florea]
Length = 301
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + +T+G+ NK VDD SI++Q+WDT G
Sbjct: 104 HKTILLGDSGVGKTSLLVQFDTGKF-QPGNFAATVGIGFTNKVVVVDDTSIKLQIWDTAG 162
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 163 QERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCG 222
Query: 128 N----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R+L
Sbjct: 223 TERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVAREL 265
>gi|194875496|ref|XP_001973609.1| GG16176 [Drosophila erecta]
gi|190655392|gb|EDV52635.1| GG16176 [Drosophila erecta]
Length = 196
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 22/164 (13%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
VI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G E
Sbjct: 1 VIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 59
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC--- 126
R S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 60 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGS 119
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 120 ERQVKREDGERLGREHNV--PFMETSAKTGLNVELSFTAVARQL 161
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + S++ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + ++
Sbjct: 128 KKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|123224924|ref|XP_001285722.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121849845|gb|EAX72792.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K +L G G GK+SL ++ F K T+G +K ++D+ + + +WDT G
Sbjct: 9 KFVLLGSSGAGKTSLIMQFVNGIF--DGLTKPTIGASFVSKSIEIDNSLLNISVWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
E +T YY+ A AI+VF + N SF +S + E+ NA + +CGN N
Sbjct: 67 ELYRGLTPMYYRNAAVAIVVFDVTNKDSFEQVSGWVSELHENTSNAIVCICGNKIDLENR 126
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
I ST Y+TS TGEGV++MF ++ Q ILSN L
Sbjct: 127 IISTESAKELANNLNLSYYETSAATGEGVDKMFLELSLQ-ILSNNKEL 173
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGN 121
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A ++V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK+ + RY D F S KST+G++ K ++ I+ Q+WDT G
Sbjct: 8 KIVLVGDCGVGKTQIRNRYTLDEFNPQS--KSTIGVEFAFKTVNINGNDIKGQIWDTSGE 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ + AILVF + SF L ++ YA EN + + GN
Sbjct: 66 ERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDLPT 125
Query: 129 LISSTY--------------KTSCKTGEGVEEMFADIGRQL--ILSNRSRLELQTMGAGG 172
ST +TS G GVE F + +++ I+ +R + +T+ A
Sbjct: 126 REVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQARKKTVRASS 185
Query: 173 IG-TDSFKLG 181
IG T S KLG
Sbjct: 186 IGQTRSIKLG 195
>gi|189233646|ref|XP_972453.2| PREDICTED: similar to rab6 [Tribolium castaneum]
Length = 324
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 130 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 187
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 188 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD--- 244
Query: 129 LISSTYKTSCKTGE 142
+S + S + GE
Sbjct: 245 -LSDKRQVSTEEGE 257
>gi|357629667|gb|EHJ78287.1| hypothetical protein KGM_09470 [Danaus plexippus]
Length = 263
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ + R+ TF++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 73 KVMLLGDSGVGKTCMLVRFRDGTFLAGNY-ISTVGIDFRNKVVTVDGIKVKLQIWDTAGQ 131
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN----- 123
ER S+T +YY+ A A +L++ + N SF + L EI YA+ + I L GN
Sbjct: 132 ERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLGEIREYAQDDVVIMLLGNKSDSGL 191
Query: 124 ------EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQLI 156
E+ L + +TS KTG VE F+ + R L+
Sbjct: 192 ERAVRREEGQRLAREYQVAFMETSAKTGLNVEAAFSHVARSLV 234
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGN 124
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNN----- 123
ER S+ SY + + AI+VF + N SF + + E+ + N I L GN
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGNKADLSD 138
Query: 124 ------EQCHNLISST----YKTSCKTGEGVEEMFADIGRQL 155
EQ L +TS K G V+ +F I L
Sbjct: 139 KREVTLEQAQELADELKIMFMETSAKAGHNVKSLFRKIALAL 180
>gi|195592112|ref|XP_002085780.1| GD14951 [Drosophila simulans]
gi|194197789|gb|EDX11365.1| GD14951 [Drosophila simulans]
Length = 265
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 22/164 (13%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
VI+ G+ GVGK+SL R+ ++ S ST+G+D NK VD +++Q+WDT G E
Sbjct: 70 VIMLGDSGVGKTSLLIRFRDGRYVPSYF-LSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 128
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC--- 126
R S+T +YY+ A A +L++ + N ++ + L EI YA E+ I L GN C
Sbjct: 129 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGS 188
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS KTG VE F + RQL
Sbjct: 189 ERQVKREDGERLGREHNV--PFMETSAKTGLNVELSFTAVARQL 230
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 22/175 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTA 127
Query: 127 HNLIS-------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+ ++S +TS K+ VEE F + ++ ++R+ Q M
Sbjct: 128 NKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEI----KNRMATQPM 178
>gi|340718722|ref|XP_003397812.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
terrestris]
gi|350409818|ref|XP_003488853.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
impatiens]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLGD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+A D F S +ST+G++ K +VDD+ ++ Q+WDT G
Sbjct: 16 KVVLIGDSGVGKSNLLSRFARDEF--SLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A++V+ + +F + L E+ + + N + L GN +
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNKADLRH 133
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
L + T +TS V+ FA++ RQ+
Sbjct: 134 LRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQI 175
>gi|402469023|gb|EJW04091.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G GVGK+SL RY +T+ + ST+G+D K KV I++Q+WDT G
Sbjct: 10 KIILIGNSGVGKTSLLNRYIDNTY--HGNYISTIGVDFKIKTLKVSSDLIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-----N 123
ER +ITS+YY+ A I+VF + + SF +++ L EI A E +I+L GN +
Sbjct: 68 ERFRTITSAYYRGAHGIIIVFDMTDLDSFTKVTEWLDEIKARANEKVEIYLIGNKIDLKD 127
Query: 124 EQC------------HNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
E C HN+ S + + S K G V+E+F + +L
Sbjct: 128 EICVQKEDIEAFKKEHNIADSNFMEVSAKDGYQVDELFFKLADKL 172
>gi|393910638|gb|EJD75978.1| Ras-like protein [Loa loa]
Length = 207
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIG 152
+ L +TS K G V+++F I
Sbjct: 131 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 169
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGN 124
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGN 124
>gi|440300438|gb|ELP92907.1| hypothetical protein EIN_312790 [Entamoeba invadens IP1]
Length = 744
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ GE VGK+ RY + F S KST+G+ +K+ V D+++++QLWDT G
Sbjct: 556 KIIMIGESSVGKTCCMNRYTTNEF--SDMTKSTVGVGVGSKDIVVKDKTVKLQLWDTAGQ 613
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN------ 123
ER A+++S+Y++ A ++VF + N SF + + E Y E I L GN
Sbjct: 614 ERFATLSSNYFRSALGGVIVFDVSNRQSFENVETWIEECKKYEEKRVIVLAGNKIDLGEG 673
Query: 124 ---------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L ++ S K+G G+EE+F D+ +
Sbjct: 674 RVVTKEEAEDKAKKLGIKYFEVSAKSGFGLEELFTDLANNI 714
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSE 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL------ILSNRSRLELQT 167
E +L +TS K VE+ F + RQ+ +N ++ +Q
Sbjct: 128 KKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGSTATNNTKPSVQV 187
Query: 168 MGAGGIGTDS 177
G+ +S
Sbjct: 188 GAGHGVSNNS 197
>gi|115312968|gb|AAI24015.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 113 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 170
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E A++ L GN C
Sbjct: 171 ERFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCET 230
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F + K+T+G D KE +VDD+ + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVQKKF--TKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
ER S+ S++Y+ A+ +LVF ++NA SF L E + A
Sbjct: 68 ERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQA 110
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++ +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + RQ+
Sbjct: 131 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 172
>gi|48096836|ref|XP_392533.1| PREDICTED: ras-related protein Rab-6A [Apis mellifera]
gi|380012436|ref|XP_003690289.1| PREDICTED: ras-related protein Rab-6A-like [Apis florea]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLGD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|307189589|gb|EFN73950.1| Ras-related protein Rab-6A [Camponotus floridanus]
gi|307196069|gb|EFN77792.1| Ras-related protein Rab-6A [Harpegnathos saltator]
gi|332025967|gb|EGI66120.1| Ras-related protein Rab-6A [Acromyrmex echinatior]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRS-IQMQLWDTGG 68
K++L GE VGKSSL R+ D F R+ST+G + +DD+S ++ ++WDT G
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKDQF--DDYRESTIGAAFLTQTVTLDDQSTVKFEIWDTAG 65
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN---- 123
ER S+ YY+ A A++V+ + +AS + E+ A+ + + LCGN
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNKLDLA 125
Query: 124 --EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILS 158
Q + Y +TS KTGEGV+E+F I ++L L+
Sbjct: 126 ARRQVSQEEAQKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKLPLT 171
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 985 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 1042
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 1043 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 1102
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K+ VE+ F + RQ+
Sbjct: 1103 KKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 1144
>gi|345494735|ref|XP_001604718.2| PREDICTED: ras-related protein Rab-6A-like [Nasonia vitripennis]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|152013703|gb|ABS19967.1| ras small monomeric GTPase Rab6 protein [Artemia franciscana]
Length = 150
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFPGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T N I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSRWIDDVRTERGNDVIIMLVGNKTD--- 129
Query: 129 LISSTYKTSCKTGE 142
+S + S + GE
Sbjct: 130 -LSDKRQVSTEEGE 142
>gi|432889390|ref|XP_004075253.1| PREDICTED: ras-related protein Rab-1A-like [Oryzias latipes]
Length = 221
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
K K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D +++++Q+W
Sbjct: 13 KAGNSKLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDMDGKTVKLQIW 70
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN 123
DT G ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 71 DTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVRQWLEEIDRYACENVSRLLVGNK 130
Query: 124 EQ-----------CHNLISST----YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+L SS +TS K+ VE+ F L +++ L +
Sbjct: 131 SDLVSKKVVDAATAQDLASSLKIPFLETSAKSSGNVEKAF------LTMASEIHSRLASE 184
Query: 169 GAGGIGTDSFKLGG 182
G G GT + G
Sbjct: 185 GGGMQGTHDSRAQG 198
>gi|431908802|gb|ELK12394.1| Ras-related protein Rab-37 [Pteropus alecto]
Length = 227
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
V+L G+ GVGK+ ++ F+S + +T+G+D NK VD +++Q+WDT G E
Sbjct: 55 VMLLGDSGVGKTCFLIQFKDGAFLSGTF-IATVGIDFRNKVVTVDGARVKLQIWDTAGQE 113
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHNL 129
R S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN E
Sbjct: 114 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKEYGVPF 173
Query: 130 ISSTYKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG VE F I ++L
Sbjct: 174 M----ETSAKTGMNVELAFLAIAKEL 195
>gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++I+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QIIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC 126
ER SITS+YY+ A+ +LV+ + SF L + + I YA E A++ L GN C
Sbjct: 102 ERFNSITSAYYRGAKGIVLVYDITKLESFDDLPKWMKMIDKYASEEAELLLVGNKLDC 159
>gi|44890744|gb|AAH66913.1| RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D + +++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVDLDGKVVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS YY+ A I+V+ + + SF+ + L EI YA EN L GN +
Sbjct: 68 ERFRTITSGYYRGAHGIIVVYDVTDMESFNNVKTWLNEIDRYANENVNKLLVGNKNDLTS 127
Query: 129 LISSTYK---------------TSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
+ Y+ TS K+ VE+ F + ++ ++R+ QTM A
Sbjct: 128 KRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEI----KNRMASQTMAA 180
>gi|324525564|gb|ADY48564.1| Ras-related protein Rab-6.2 [Ascaris suum]
Length = 207
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIG 152
+ L +TS K G V+++F I
Sbjct: 131 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 169
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGN-- 122
ER S+ ++Y+ A+ +LVF + SF L E + A EN + GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQASPRDPENFPFVVLGNKV 128
Query: 123 ------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
+ CH+ Y +TS K G VE F I ++ L+ + +EL
Sbjct: 129 DLENRAVSAKRAQQWCHSKNEIPYFETSAKEGINVEHAFQTIAKK-ALAQEADVEL 183
>gi|432911398|ref|XP_004078660.1| PREDICTED: ras-related protein Rab-12-like [Oryzias latipes]
Length = 242
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++I+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QIIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ +LV+ + +F L + + I YA E A++ L GN C
Sbjct: 102 ERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEEAELLLVGNKLDCET 161
>gi|320580277|gb|EFW94500.1| GTPase, Ras-like GTP binding protein [Ogataea parapolymorpha DL-1]
Length = 200
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ GVGK+SL R+ YDTF + +T+G+D +K +DD++I++QLWDT G
Sbjct: 6 KIVFLGDQGVGKTSLITRFMYDTF--DAHYAATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AI+V+ + N SF +S+ + N I L GN N
Sbjct: 64 ERFRSLIPSYIRDSNVAIIVYDITNKESFQNVSKWFDYVKQERGSNVLIILVGNKSDLEN 123
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
I +TS K G V+ +F + + L
Sbjct: 124 KIIPNEEGESMCKKLGCNFFIETSSKNGYNVKNLFKKVAKLL 165
>gi|66505876|ref|XP_392276.2| PREDICTED: ras-related protein Rab-26 isoform 1 [Apis mellifera]
Length = 301
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + +T+G+ NK VDD SI++Q+WDT G
Sbjct: 104 HKTILLGDSGVGKTSLLVQFDTGKF-QPGNFAATVGIGFTNKVVVVDDTSIKLQIWDTAG 162
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 163 QERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCG 222
Query: 128 N----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R+L
Sbjct: 223 TERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVAREL 265
>gi|290462723|gb|ADD24409.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 160
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN 122
ER S+ SY + + A++V+ NA SFH S+ + ++ T +A I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDAIIMLVGN 126
>gi|442755753|gb|JAA70036.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 222
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A DT+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIIIGDSGAGKSSLLLRFADDTY--SESNMSTIGVDFKIKTVKIDNVTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNN---E 124
ER +ITS+YY+ A I V+ + N SF + + L + +A I L GN E
Sbjct: 67 ERFRTITSTYYRGAHGIITVYDVTNRVSFESVKKTWLTDIEKYSSANISKLLIGNKVDLE 126
Query: 125 QCHNLISSTYK------------TSCKTGEGVEEMFADIGRQL 155
+ + S + S KT + VE+ F I + L
Sbjct: 127 ENRAVTSVEAREFAMQNNMDYIEASAKTAQNVEKAFESIAKTL 169
>gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus]
Length = 212
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKTDLSD 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 131 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 172
>gi|61806504|ref|NP_001013485.1| ras-related protein Rab-6B [Danio rerio]
gi|60552244|gb|AAH91529.1| Zgc:112018 [Danio rerio]
Length = 208
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF + S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVIIMLVGNKTDLEE 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAAL 174
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK+ L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 18 KLLLIGDSGVGKNCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 76 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 129
>gi|46361978|ref|NP_055168.2| ras-related protein Rab-26 [Homo sapiens]
gi|134044256|sp|Q9ULW5.3|RAB26_HUMAN RecName: Full=Ras-related protein Rab-26
gi|52854304|gb|AAU88191.1| Ras-related oncogene protein [Homo sapiens]
gi|119605958|gb|EAW85552.1| RAB26, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 256
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 18 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF S+ + ++ + N I L GN +
Sbjct: 76 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 135
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
L +T K TS K G V+ +F I L
Sbjct: 136 KRQVTLEEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSL 177
>gi|426380780|ref|XP_004057039.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-26 [Gorilla
gorilla gorilla]
Length = 265
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 74 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 132
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 133 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 192
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG V+ F I ++L
Sbjct: 193 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 234
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 73 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 130
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 131 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 184
>gi|295670409|ref|XP_002795752.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225684456|gb|EEH22740.1| GTP-binding protein yptV5 [Paracoccidioides brasiliensis Pb03]
gi|226284837|gb|EEH40403.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y + SSS K+T+G D K+ VDDR +
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKY--SSSYKATIGADYLTKDVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
+QLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS ++TS K VE+ F +I + ++
Sbjct: 119 PFVVLGNKIDVEESKRMISPKRAATYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--- 125
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLDEIDRYACENVSRLLVGNKSDLVS 127
Query: 126 --------CHNLISST----YKTSCKTGEGVEEMFADIGRQL 155
+L SS +TS K+ + VE F + ++
Sbjct: 128 KKVVDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEI 169
>gi|296415700|ref|XP_002837524.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633396|emb|CAZ81715.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR +
Sbjct: 1 MATKKKILLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A ++
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDVEESKRMISQRRAMAFCTSKGGIPYFETSAKEAINVEQAFEVIARNALQQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|339236385|ref|XP_003379747.1| GTP-binding protein Ryh1 [Trichinella spiralis]
gi|316977574|gb|EFV60659.1| GTP-binding protein Ryh1 [Trichinella spiralis]
Length = 207
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD--- 127
Query: 129 LISSTYKTSCKTGE 142
+S + S + GE
Sbjct: 128 -LSDKRQVSSEEGE 140
>gi|270014377|gb|EFA10825.1| hypothetical protein TcasGA2_TC001600 [Tribolium castaneum]
Length = 209
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 78 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 135
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 136 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 189
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 22/194 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER +ITSSYY+ A I+V+ + + +F + Q L EI YA E L GN
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQWLQEIDRYAVEGVNKLLVGNKSDLTT 128
Query: 127 -----HNLISS--------TYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
HN S +TS K VE+ F + +Q+ + R+ +M +G
Sbjct: 129 KKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQI----KDRMGSTSMASGSG 184
Query: 174 GTDSFKLGGRGSEE 187
G + K G+ E+
Sbjct: 185 GKSTIKGLGQTVEQ 198
>gi|407854096|gb|EKG06642.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 272
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 26/199 (13%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
V + K++L G+ VGK+SL R+ YDTF ++T+G+D F+K VD+R++++ +WD
Sbjct: 35 VVKHKIVLLGDQSVGKTSLVTRFMYDTF--DQQYQATIGIDFFSKTIPVDNRTVRLHVWD 92
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGN-- 122
T G ER S+ SY + + I+V+ + + ASF + + E+ ++ IFL GN
Sbjct: 93 TAGQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKL 152
Query: 123 NEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMG 169
+ Q ++S+ + S K G+ V+ +F + L L + +
Sbjct: 153 DAQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALPLPDDN-------- 204
Query: 170 AGGIGTDSFKLGGRGSEEV 188
A GIG +G S+ V
Sbjct: 205 ASGIGKKGNGVGDSSSQPV 223
>gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti]
gi|157112174|ref|XP_001657424.1| rab6 [Aedes aegypti]
gi|108878119|gb|EAT42344.1| AAEL006091-PA [Aedes aegypti]
gi|403182767|gb|EJY57618.1| AAEL006091-PC [Aedes aegypti]
Length = 209
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D KE VDDR + MQLWDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTKEVLVDDRLVTMQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LV+ ++NA SF L E + A E + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPEGFPFVVLGNKV 127
Query: 125 QC---HNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSR 162
+IS+ ++TS K VE+ F I R + S+
Sbjct: 128 DVGEDKRVISTKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESQ 182
>gi|145549135|ref|XP_001460247.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834498|emb|CAI44563.1| rab_A40 [Paramecium tetraurelia]
gi|124428076|emb|CAK92850.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 23/196 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R+A D F S S +T+G+D + +D +++++Q+WDT G
Sbjct: 10 KLVIIGNSGVGKSSLLLRFADDQF--SESYLTTIGVDFRFRTLPIDGKNVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGN----- 122
ER +ITS+YYK A+ ++V+ + SF + + L E+ +Y E N ++ + GN
Sbjct: 68 ERFRTITSAYYKGADGIVMVYDVTQGQSFDDIDKFWLHEVESYGEKNVQLLVIGNKNDLD 127
Query: 123 ----------NEQC--HNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
E C HN++ + S KT + V F ++ R+L+ + ++
Sbjct: 128 EQKQVESSKAQEYCKSHNML--FMECSAKTADHVNNAFLELSRKLMAKKDASQPPKSSNP 185
Query: 171 GGIGTDSFKLGGRGSE 186
G+ S + GS+
Sbjct: 186 TPTGSQSSQSKAGGSQ 201
>gi|225561783|gb|EEH10063.1| GTPase Rab7 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y + SSS K+T+G D K+ VDDR +
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKY--SSSYKATIGADYLTKDVLVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
+QLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F +I + +
Sbjct: 119 PFVVLGNKIDVEESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|348521982|ref|XP_003448505.1| PREDICTED: ras-related protein Rab-12-like [Oreochromis niloticus]
Length = 243
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++I+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 45 QIIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 102
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ +LV+ + +F L + + I YA E A++ L GN C
Sbjct: 103 ERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEEAELLLVGNKLDCET 162
>gi|348502339|ref|XP_003438725.1| PREDICTED: ras-related protein Rab-26-like [Oreochromis niloticus]
Length = 250
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ S ST+G+D NK +D +++Q+WDT G
Sbjct: 59 KVMLVGDSGVGKTCLLVRFKDGAFLAGSF-ISTVGIDFRNKVMSIDAVKVKLQIWDTAGQ 117
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA ++ + L GN + H
Sbjct: 118 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIRAWLTEIHEYAQQDVVVMLLGNKADVTH 177
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ + +TS K+G VE F + R+L
Sbjct: 178 DRVVKREEGEKLAKEFGVPFMETSAKSGLNVELAFTAVAREL 219
>gi|198417531|ref|XP_002121908.1| PREDICTED: similar to GTP-binding protein like (XD674) [Ciona
intestinalis]
Length = 428
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 89/179 (49%), Gaps = 27/179 (15%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKV-DDRSIQMQLWD 65
P K++LCG+ VGKSS R ++F +STLG+D NK KV R+I +QLWD
Sbjct: 225 PLYKIVLCGDICVGKSSFMFRACNNSF--KKHIRSTLGVDFQNKTLKVTPSRTITVQLWD 282
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA--KIFLCGNN 123
T G ER S+TSSY++ A IL++ + N ASF + + +E +T + A + +CGN
Sbjct: 283 TAGQERFRSLTSSYFRRANGVILLYDVTNPASF-LNVKDWMETITSSSAAGTPVMICGNK 341
Query: 124 EQCHN----------------LISSTY-----KTSCKTGEGVEEMFADIGRQLILSNRS 161
N +++ Y +TS GE VE +GR L N S
Sbjct: 342 VDLRNKSHGRSQPVVYQNEGAQLAANYGALFMETSAALGENVEAALKTLGRHLQGKNES 400
>gi|110591381|pdb|2FE4|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Inactive Gdp-Bound Form
gi|110591397|pdb|2FFQ|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Active Gtpgs-Bound Form
gi|166235341|pdb|2E9S|A Chain A, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235342|pdb|2E9S|B Chain B, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235343|pdb|2E9S|C Chain C, Human Neuronal Rab6b In Three Intermediate Forms
Length = 171
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 121
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
EQ +S + +TS KTG V+++F + L+
Sbjct: 122 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALL 164
>gi|402907305|ref|XP_003916417.1| PREDICTED: ras-related protein Rab-26 isoform 1 [Papio anubis]
Length = 256
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLAEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|291414762|ref|XP_002723623.1| PREDICTED: RAB37, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
Length = 216
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGARVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N ASF + L E+ YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEVHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ +++ Y +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|67470129|ref|XP_651035.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467717|gb|EAL45649.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790064|dbj|BAD82828.1| small GTPase EhRabC8 [Entamoeba histolytica]
gi|449709773|gb|EMD48974.1| small GTPase EhRabC8, putative [Entamoeba histolytica KU27]
Length = 195
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGK+SL +RY F+ ST+G+D KE K+ + +++Q+WDT G
Sbjct: 10 KILMIGESSVGKTSLVKRYCEGMFLEE--MMSTVGIDFEFKELKIGETLVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN--NEQCH 127
ER ++TSSY++ I+V+ ++ +F L+ + E N++I + GN +++
Sbjct: 68 ERFHNVTSSYFRGTHGCIIVYDVNKLETFEKLNYWIEEYRDEQPNSEIIIVGNKIDKEMK 127
Query: 128 NLISST-----------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
L S+ Y +S KTG+ VEE+F D+ IL N+ + L
Sbjct: 128 VLESNAIQFANTRKARHYLSSAKTGQNVEEIFQDLAES-ILQNKKLIAL 175
>gi|390362735|ref|XP_791590.3| PREDICTED: ras-related protein Rab-6A-like [Strongylocentrotus
purpuratus]
Length = 211
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSIDEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|389584207|dbj|GAB66940.1| small GTPase Rab1A [Plasmodium cynomolgi strain B]
Length = 221
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 41/205 (20%)
Query: 10 KVILCGEYGVGKSSLFRRYAY---------------------DTFISSSSRKSTLGLDNF 48
K++L G+ GVGKS L R+A DT+ + S ST+G+D
Sbjct: 10 KILLIGDSGVGKSCLLLRFARKRGRQTYLINRFETENDQINDDTY--TDSYISTIGVDFK 67
Query: 49 NKEYKVDDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI 108
K +++D+ I++Q+WDT G ER +ITSSYY+ A+ I+V+ + + SF+ + ++EI
Sbjct: 68 IKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 127
Query: 109 VTYA-ENAKIFLCGNNEQCHNLISSTY---------------KTSCKTGEGVEEMFADIG 152
YA E+ + L GN N + +Y +TS K VE+ F +
Sbjct: 128 EKYASEDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMA 187
Query: 153 RQLILSNRSRLELQTMGAGGIGTDS 177
+ + N+S+LE Q G I ++
Sbjct: 188 HE--IKNKSQLENQQKGRANINLNA 210
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGN 121
>gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambiae str. PEST]
gi|157014741|gb|EAU76291.2| AGAP011363-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|449706355|gb|EMD46218.1| small GTPase EhRabX18, putative, partial [Entamoeba histolytica
KU27]
Length = 180
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKSSL RY + F ++ +++G+D K +DD ++ Q++DT G
Sbjct: 17 KILLVGDPNVGKSSLLLRYIDNVFNEDTT--TSIGVDFKFKSILIDDVIVKCQIYDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL-CGNNEQCHN 128
E+ I +SYY A AA+LVF + ++F VL L +I Y N KI L C +Q N
Sbjct: 75 EKFREIGNSYYNGAHAALLVFDGGDVSTFQVLEIWLRDIRKYNTNIKILLVCNKCDQPVN 134
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T KTS K GEGV E F + R L+
Sbjct: 135 IPEGTISLYANEISEEGKWIKTSAKNGEGVTEAFETMIRMLL 176
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 39/206 (18%)
Query: 3 SIKVPEQ-----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDR 57
+++ PE K++L G+ GVGKSS+ R+ D F ++ST+G+D K +VD +
Sbjct: 39 AVREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAF--DDHQQSTIGVDFKVKMIEVDHK 96
Query: 58 SIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA----- 112
I+M +WDT G ER ++TSSYY+ A+ ILV+ ++ SF L+ L E+ Y+
Sbjct: 97 RIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGR 156
Query: 113 ENAKIFLCGNNEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQL---- 155
E K+ L GN ++ + S KT G+ ++F ++ +++
Sbjct: 157 EIVKV-LVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNP 215
Query: 156 -ILSN----RSRLELQ----TMGAGG 172
+L+N R R+ LQ G+GG
Sbjct: 216 SLLTNTAPGRPRVNLQADAAAKGSGG 241
>gi|170574453|ref|XP_001892820.1| Ras-related protein Rab-30 [Brugia malayi]
gi|158601425|gb|EDP38340.1| Ras-related protein Rab-30, putative [Brugia malayi]
Length = 197
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L R++ F S +T+G+D K KVDD I++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQS--ATIGVDFMIKTVKVDDDKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN 122
ER SIT SYY+ A A +LV+ + SF L + L EI YA N ++ L GN
Sbjct: 67 ERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYA-NRRVLKILVGN 120
>gi|340718724|ref|XP_003397813.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
terrestris]
gi|350409814|ref|XP_003488852.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
impatiens]
Length = 211
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLGD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K+ VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 169
>gi|403273311|ref|XP_003928462.1| PREDICTED: ras-related protein Rab-26 [Saimiri boliviensis
boliviensis]
Length = 256
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|380811476|gb|AFE77613.1| ras-related protein Rab-26 [Macaca mulatta]
Length = 256
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLAEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 688 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 745
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 746 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 799
>gi|125981885|ref|XP_001354946.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
gi|54643258|gb|EAL32002.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF S S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---NEQC 126
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN + C
Sbjct: 68 ERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDC 127
Query: 127 HNLISST------------YKTSCKTGEGVEEMFADIGRQLI 156
+I+ Y+TS K V+ MF I RQ++
Sbjct: 128 KVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVL 169
>gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 213
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
AS + + K++ GE VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++
Sbjct: 15 ASTPLKKFKLVFLGEQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRL 72
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLC 120
QLWDT G ER S+ SY + + A++V+ + N SF S+ + ++ ++ I L
Sbjct: 73 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLV 132
Query: 121 GN---------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
GN +++ L + +TS K G V+ +F I L
Sbjct: 133 GNKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMAL 182
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
+++ + K++L G+ VGK+SL R+ YDTF + ++T+G+D +K ++DR++++
Sbjct: 12 SALPLKRTKIVLLGDQSVGKTSLITRFMYDTF--DQTYQATIGIDFLSKTMYLEDRTVRL 69
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLC 120
QLWDT G ER S+ SY + + AI+VF + N ASF ++ + ++ + + I L
Sbjct: 70 QLWDTAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGGDVIIVLV 129
Query: 121 GNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIG 152
GN N T +TS K G V+ +F I
Sbjct: 130 GNKADLSNDRQVTQEEAQQKSTELDIIYMETSAKAGHNVKTLFKKIA 176
>gi|296809872|ref|XP_002845274.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
gi|238842662|gb|EEQ32324.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y + S+S K+T+G D KE VD R +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKY--SASYKATIGADYLTKEVMVDGRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I + +L
Sbjct: 119 PFVVLGNKIDVEESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALLQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|427777835|gb|JAA54369.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 272
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
KV + KV+L G GVGK+SL RY+ FI ++S T+G V D +++QLW
Sbjct: 8 KVVDAKVVLLGALGVGKTSLITRYSQKKFIGTTS--PTIGASFTTLRVNVGDAKVRIQLW 65
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN 123
DT G ER ++ YY+ A AAI+ + + +A+SF + Q +LE+ E A + L GN
Sbjct: 66 DTAGQERFRAMAPLYYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGN- 124
Query: 124 EQC----HNLISS-----------TYKTSCK--TGEGVEEMFADIGRQLILS 158
+C H + Y + C + EG++EMF + ++I S
Sbjct: 125 -KCDLMQHRAVDREMAERYARDVGAYFSECSALSNEGIDEMFRHLALRIIES 175
>gi|402591009|gb|EJW84939.1| hypothetical protein WUBG_04149 [Wuchereria bancrofti]
Length = 193
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L R++ F S +T+G+D K KVDD I++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQS--ATIGVDFMIKTVKVDDDKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN 122
ER SIT SYY+ A A +LV+ + SF L + L EI YA N ++ L GN
Sbjct: 67 ERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYA-NRRVLKILVGN 120
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A ++V+ + + SF+ L Q L EI YA EN L G+
Sbjct: 68 ERFRTITSSYYRGAHGIVVVYDVTDQDSFNNLKQRLQEIDRYACENVNKPLVGD 121
>gi|427792313|gb|JAA61608.1| Putative rab30, partial [Rhipicephalus pulchellus]
Length = 217
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +VD +++Q+WDT G
Sbjct: 18 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFLIKTVEVDGEKVKLQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNNEQCH 127
ER SIT SYY+ A A ILV+ + +F L L EI YA + K+ L GN
Sbjct: 76 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEQYA-SPKVLRALVGNKIDRE 134
Query: 128 NLISSTY--------------KTSCKTGEGVEEMFADIGRQLILSNRS 161
+ T+ +TS K + V+++F +I +L R+
Sbjct: 135 DREIPTHIGEEFARRSDMYFVETSAKEADNVDKLFTEIAVRLTAEARA 182
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 71 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLAD 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F I +L
Sbjct: 131 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKL 172
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ VGK+S+ R+ +D F + + + T+G+D +K +VD++S+++QLWDT G
Sbjct: 14 KIVFLGDQAVGKTSIINRFIFDNF--TGNEQPTVGIDFISKTLQVDNKSVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV-TYAENAKIFLCGNNEQCHN 128
ER S+ SY + ++AAI+ F + N SF L + + ++ + I++ GN N
Sbjct: 72 ERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKIDLEN 131
Query: 129 LISSTYKTSCKTGEGVEEMFADIGRQL 155
+ K E ++F+++G Q
Sbjct: 132 ----ERQIPTKQAEDKAKVFSELGAQF 154
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL 173
>gi|427786685|gb|JAA58794.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 231
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
KV + KV+L G GVGK+SL RY+ FI ++S T+G V D +++QLW
Sbjct: 8 KVVDAKVVLLGALGVGKTSLITRYSQKKFIGTTS--PTIGASFTTLRVNVGDAKVRIQLW 65
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN 123
DT G ER ++ YY+ A AAI+ + + +A+SF + Q +LE+ E A + L GN
Sbjct: 66 DTAGQERFRAMAPLYYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGN- 124
Query: 124 EQC----HNLISS-----------TYKTSCK--TGEGVEEMFADIGRQLILS 158
+C H + Y + C + EG++EMF + ++I S
Sbjct: 125 -KCDLMQHRAVDREMAERYARDVGAYFSECSALSNEGIDEMFRHLALRIIES 175
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-NEQCH 127
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN N+
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTS 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ ST +TS K VEE F + ++ + + + +GG
Sbjct: 128 QKVVSTETAQAFADELGIPFLETSAKNATNVEEAF------MAMTAAIKTRMASQPSGGA 181
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 182 KPPTVQIRGQ 191
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q WDT G
Sbjct: 61 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQRWDTAGQ 118
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 119 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 172
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--------------VTYAENA 115
ER +ITS+YY+ I+V+ + + SF + + L EI A N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNE 127
Query: 116 KIFLCGNNEQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
K+ L + ++ N + ++TS K V+EMF I RQ++ + + R E Q +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAI 181
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 25/191 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL-------ILSNRSRLELQ 166
Y +TS K VE+ F + RQ+ I +N ++ +
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKASVN 187
Query: 167 TMGAGGIGTDS 177
G+ +S
Sbjct: 188 VSPGHGVSNNS 198
>gi|405971526|gb|EKC36361.1| Ras-related protein Rab-30 [Crassostrea gigas]
Length = 202
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L GE GVGK+ L RR+ F + +T+G+D K +V+ I++Q+WDT G
Sbjct: 9 KVVLIGEAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKSVEVNGEKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNN---- 123
ER SIT SYY A A ILV+ + + SF + + EI YA N K+F L GN
Sbjct: 67 ERFRSITQSYYHSANALILVYDVCSQLSFDNIPHWIQEIEKYA-NTKVFSYLVGNKIDQI 125
Query: 124 ----------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ + +TS K E V+ +F DI +L
Sbjct: 126 NRREIPSHIGEQFAKRYEMKFIETSAKEAENVDALFYDIATEL 168
>gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti]
gi|108878120|gb|EAT42345.1| AAEL006091-PB [Aedes aegypti]
Length = 210
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD--- 129
Query: 129 LISSTYKTSCKTGE 142
+S + S + GE
Sbjct: 130 -LSDKRQVSTEEGE 142
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 23 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 80
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 81 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 134
>gi|67474118|ref|XP_652808.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469697|gb|EAL47422.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKSSL RY + F ++ +++G+D K +DD ++ Q++DT G
Sbjct: 17 KILLVGDPNVGKSSLLLRYIDNVFNEDTT--TSIGVDFKFKSILIDDVIVKCQIYDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL-CGNNEQCHN 128
E+ I +SYY A AA+LVF + ++F VL L +I Y N KI L C +Q N
Sbjct: 75 EKFREIGNSYYNGAHAALLVFDGGDVSTFQVLEIWLRDIRKYNTNIKILLVCNKCDQPVN 134
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T KTS K GEGV E F + R L+
Sbjct: 135 IPEGTISLYANEISEEGKWIKTSAKNGEGVTEAFETMIRMLL 176
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|270013222|gb|EFA09670.1| hypothetical protein TcasGA2_TC011797 [Tribolium castaneum]
Length = 366
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ + ++ F+S + ST+G+D NK VD +++Q+WDT G
Sbjct: 172 KVMLLGDSGVGKTCILMQFRDGLFLSGNY-ISTVGIDFRNKVVTVDQTKVKLQIWDTAGQ 230
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQC-- 126
ER S+T +YY+ A A +L++ + N SF + L EI YA+ + I L GN C
Sbjct: 231 ERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLSEIREYAQDDVVIMLLGNKADCGG 290
Query: 127 --------HNLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
++ Y +TS K+G+ VE F + R+L
Sbjct: 291 DRAVRREDGERLAREYNVAFMETSAKSGQNVELAFLAVAREL 332
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 25/191 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL-------ILSNRSRLELQ 166
Y +TS K VE+ F + RQ+ I +N ++ +
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKANVN 187
Query: 167 TMGAGGIGTDS 177
G+ +++
Sbjct: 188 VAPGQGVSSNN 198
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+ GE VGKSS+ R+ D F + SR+ T+G K D +I+ ++WDT G
Sbjct: 14 KVVFLGESAVGKSSIVLRFVSDDF--TESREPTIGAAFLTKRTTRDGNTIKFEIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNNEQCHN 128
ER A + YY+ A+AA++VF + N SFH + E+ A N + L N N
Sbjct: 72 ERFAPLAPMYYRNAQAAVVVFDITNEHSFHKAEDWVKELHEKAGNDIVIALVANKMDLLN 131
Query: 129 LISST---------------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
+ + +K S KTGE + E+F +G ++ S +S
Sbjct: 132 VQGTILDEAVNEEEVDSFCQREGLLYFKASAKTGENIHEIFQTVGEKIPYSKQS 185
>gi|392580232|gb|EIW73359.1| hypothetical protein TREMEDRAFT_42329 [Tremella mesenterica DSM
1558]
Length = 206
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D +E VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRF--STQYKATIGADFLTRELVVDDRVVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++++ SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ ++S ++TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDMEESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKN-ALA 177
Query: 159 NRSRLELQTMGAGGIGTDS 177
+ EL I DS
Sbjct: 178 QEAETELYADYPDPIRIDS 196
>gi|50311935|ref|XP_455999.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645135|emb|CAG98707.1| KLLA0F20471p [Kluyveromyces lactis]
Length = 212
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF + ++T+G+D +K +DD++I++QLWDT G
Sbjct: 13 KIVFLGEQGVGKTSLITRFMYDTF--DDNYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY--AENAKIFLCGNN---- 123
ER S+ SY + + AI+V+ + N SF + + + ++ EN + + GN
Sbjct: 71 ERFRSLIPSYIRDSHVAIVVYDVTNRKSFEYIDKWIEDVKMERGEENVILVIVGNKSDLV 130
Query: 124 ----------EQCHNLISSTY--KTSCKTGEGVEEMFADIGRQL 155
E+ ++++ +TS K G V+ +F I + L
Sbjct: 131 EERQVSTEEGERKSTVLNAKLFIETSTKAGFNVKTLFKKIAKLL 174
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 20 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 78 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 131
>gi|358388492|gb|EHK26085.1| ras-related small GTPase [Trichoderma virens Gv29-8]
Length = 206
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 24/174 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR + MQLWDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVTMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A N + GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKI 128
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
E+ +IS+ ++TS K +++ F I R + S
Sbjct: 129 DVEESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQEES 182
>gi|350417010|ref|XP_003491213.1| PREDICTED: ras-related protein Rab-26-like isoform 1 [Bombus
impatiens]
gi|350417012|ref|XP_003491214.1| PREDICTED: ras-related protein Rab-26-like isoform 2 [Bombus
impatiens]
Length = 303
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + +T+G+ NK VDD SI++Q+WDT G
Sbjct: 106 HKTILLGDSGVGKTSLLVQFDTGRF-QPGNFAATVGIGFTNKVVVVDDTSIKLQIWDTAG 164
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 165 QERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCG 224
Query: 128 N----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R L
Sbjct: 225 TERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVARDL 267
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 21 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 79 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 132
>gi|367017001|ref|XP_003682999.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
gi|359750662|emb|CCE93788.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
Length = 222
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 14 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + LC GN
Sbjct: 72 ERFRSLIPSYIRDSRVAIVVYDITKKKSFEFIDKWIEDVKNERGEENVILCIVGNKSDLA 131
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E L+ + +TS K G V+ +F I + L
Sbjct: 132 DERQVSTEEGEAKAKLLGAKIFMETSTKAGHNVKNLFKKIAKSL 175
>gi|229367302|gb|ACQ58631.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K +DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYSEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N +SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVSSFQQTSKWIEDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 174
>gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener]
gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 268
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 20/194 (10%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
V + K++L G+ VGK+SL R+ YDTF ++T+G+D F+K VD+R++++ +WD
Sbjct: 32 VVKHKIVLLGDQSVGKTSLVTRFMYDTF--DQQYQATIGIDFFSKTIPVDNRTVRLHVWD 89
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGN-- 122
T G ER S+ SY + + I+V+ + + ASF + + E+ ++ IFL GN
Sbjct: 90 TAGQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKL 149
Query: 123 NEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILS--NRSRLELQT 167
+ Q ++S+ + S K G+ V+ +F + L L N S + +
Sbjct: 150 DAQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALPLPDDNASGIGKKG 209
Query: 168 MGAGGIGTDSFKLG 181
G G + F LG
Sbjct: 210 NGVGDSSSQPFVLG 223
>gi|56790140|dbj|BAD82866.1| small GTPase EhRabX18 [Entamoeba histolytica]
Length = 195
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKSSL RY + F ++ +++G+D K +DD ++ Q++DT G
Sbjct: 17 KILLVGDPNVGKSSLLLRYIDNVFNEDTT--TSIGVDFKFKSILIDDVIVKCQIYDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL-CGNNEQCHN 128
E+ I +SYY A AA+LVF + ++F VL L +I Y N KI L C +Q N
Sbjct: 75 EKFREIGNSYYNGAHAALLVFDGGDVSTFQVLEIWLRDIRKYNTNIKILLVCNKCDQPVN 134
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T KTS K GEGV E F + R L+
Sbjct: 135 IPEGTISLYANEISEEGKWIKTSAKNGEGVTEAFETMIRMLL 176
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 7 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 65 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 118
>gi|340712041|ref|XP_003394573.1| PREDICTED: ras-related protein Rab-26-like isoform 1 [Bombus
terrestris]
gi|340712043|ref|XP_003394574.1| PREDICTED: ras-related protein Rab-26-like isoform 2 [Bombus
terrestris]
Length = 303
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + +T+G+ NK VDD SI++Q+WDT G
Sbjct: 106 HKTILLGDSGVGKTSLLVQFDTGRF-QPGNFAATVGIGFTNKVVVVDDTSIKLQIWDTAG 164
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER S+T +YY+ A A +L++ + N S+ + L EI +A E+ I L GN C
Sbjct: 165 QERFRSVTHAYYRDAHALLLLYDVTNKTSYDNIRAWLSEIREHANEDVVIMLLGNKSDCG 224
Query: 128 N----------LISSTYK-----TSCKTGEGVEEMFADIGRQL 155
++ YK TS KTG VE F + R L
Sbjct: 225 TERVVKREDGERLAQEYKVPFMETSAKTGLNVELAFLAVARDL 267
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ GE GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N ST ++TS K VE+ F + + L+
Sbjct: 119 PFVVIGNKVDLDNRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKN-ALAQE 177
Query: 161 SRLEL 165
+ +EL
Sbjct: 178 TEVEL 182
>gi|296219343|ref|XP_002755819.1| PREDICTED: ras-related protein Rab-26 [Callithrix jacchus]
Length = 256
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|183231384|ref|XP_001913559.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802502|gb|EDS89664.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 193
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKSSL RY + F ++ +++G+D K +DD ++ Q++DT G
Sbjct: 15 KILLVGDPNVGKSSLLLRYIDNVFNEDTT--TSIGVDFKFKSILIDDVIVKCQIYDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL-CGNNEQCHN 128
E+ I +SYY A AA+LVF + ++F VL L +I Y N KI L C +Q N
Sbjct: 73 EKFREIGNSYYNGAHAALLVFDGGDVSTFQVLEIWLRDIRKYNTNIKILLVCNKCDQPVN 132
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T KTS K GEGV E F + R L+
Sbjct: 133 IPEGTISLYANEISEEGKWIKTSAKNGEGVTEAFETMIRMLL 174
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAELLGAKIFMETSTKAGYNVKALFKKIAKSL 173
>gi|332018492|gb|EGI59082.1| Ras-related protein Rab-24 [Acromyrmex echinatior]
Length = 200
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G VGK+SL RY +D+F + ++T+G K +V+D ++ M +WDT G
Sbjct: 7 KVVLLGNAMVGKTSLMERYVHDSFNGNRPYQNTIGTVFAAKRVQVNDVTLIMGIWDTAGS 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG-------- 121
E+ ++T +YY+ A+AAI+ + + +++F + E+ + EN K++LC
Sbjct: 67 EKYDAMTRTYYRGAKAAIVCYDITKSSTFQRAKHWVRELRSIEENCKVYLCATKKDLCDE 126
Query: 122 ----NNEQCHNLI--------SSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
++ +++ + + TS KTGE V E+F +I + + SN L+
Sbjct: 127 GFVSDDPDIQSVVERYASGTQTKLFVTSSKTGENVAELFDEIIQDFV-SNPENLQ 180
>gi|340502668|gb|EGR29335.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 94/162 (58%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R++ D F + + +T+G+D + ++ +S+++Q+WDT G
Sbjct: 10 KLVIIGNSGVGKSSLLLRFSDDQF--NENYLTTIGVDFRFRTLNIEGKSVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGN----N 123
ER +ITS+YYK A+ +LV+ + + +F + + + E+ +YAE N ++ L GN N
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDITSQNTFDDIEKFWISEVESYAEKNVELMLIGNKKDLN 127
Query: 124 EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLI 156
+Q I+ Y + S KT + V++ F + ++L+
Sbjct: 128 QQVTTQIAEEYAKHKNMEFFEVSAKTADSVQQAFLTLSKKLM 169
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ DTF S KST+G++ + +D + I+ Q+WDT G
Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRDTFDLES--KSTIGVEFATRNVNIDGKVIKAQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN 122
ER +ITS+YY+ A A++V+ + SFH L+ L E+ +AE N + L GN
Sbjct: 76 ERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
>gi|388583972|gb|EIM24273.1| GTP-binding protein ryh1 [Wallemia sebi CBS 633.66]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YDTF + ++T+G+D +K +DDR+I++QLWDT G
Sbjct: 20 KLVFLGEQSVGKTSLITRFMYDTF--DKTYQATIGIDFLSKTMYLDDRTIRLQLWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCG------- 121
ER S+ SY + + A++V+ + N S+ S+ + E+ ++ I L G
Sbjct: 78 ERFRSLIPSYIRDSSVAVVVYDVSNKNSYDNTSKWIEEVKQERGDDVIIVLVGNKVDLSE 137
Query: 122 ---NNEQ----CHNLISSTYKTSCKTGEGVEEMFADIGRQLILS 158
NN+Q C N +TS K+G V+++F I L S
Sbjct: 138 KEVNNDQVKEYCDNNGILFIETSAKSGFNVKQLFKRIALALPAS 181
>gi|239788471|dbj|BAH70915.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 210
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLTD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ DTF S KST+G++ + +D + I+ Q+WDT G
Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRDTFDLES--KSTIGVEFATRNVNIDGKVIKAQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN 122
ER +ITS+YY+ A A++V+ + SFH L+ L E+ +AE N + L GN
Sbjct: 76 ERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+A D F S +ST+G++ K +VDD+ ++ Q+WDT G
Sbjct: 16 KVVLIGDSGVGKSNLLSRFARDEF--SLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A++V+ + +F + L E + + N + L GN +
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGNKADLRH 133
Query: 129 L--ISS-------------TYKTSCKTGEGVEEMFADIGRQL 155
L +S + +TS VE FA++ RQ+
Sbjct: 134 LRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQI 175
>gi|308489025|ref|XP_003106706.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
gi|308253360|gb|EFO97312.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 129
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>gi|17570073|ref|NP_510790.1| Protein RAB-6.2 [Caenorhabditis elegans]
gi|74966331|sp|Q22782.1|RAB6B_CAEEL RecName: Full=Ras-related protein Rab-6.2
gi|351059242|emb|CCD74453.1| Protein RAB-6.2 [Caenorhabditis elegans]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 129
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 116
>gi|399163147|gb|AFP33149.1| rab-6.2, partial [Caenorhabditis elegans]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 11 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 69 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 128
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 129 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 167
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLES--YISTIGVDFKIRTVELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|268576735|ref|XP_002643347.1| C. briggsae CBR-RAB-6.2 protein [Caenorhabditis briggsae]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 129
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>gi|388581470|gb|EIM21778.1| hypothetical protein WALSEDRAFT_32360 [Wallemia sebi CBS 633.66]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQLWDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKRF--SNQYKATIGADFLTKEVVVDDRVVTMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-----NAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++NA SF L E + A N + GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNNAKSFETLDSWRDEFLIQASPQDPVNFPFVVLGNKI 128
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLIL 157
E +S ++TS K VE+ F I R ++
Sbjct: 129 DMEDSKRAVSQKKATSWCQSKGNIPYFETSAKEAINVEQAFQTIARNALV 178
>gi|357631591|gb|EHJ79060.1| putative ras-related protein Rab [Danaus plexippus]
Length = 201
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 20/172 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKS L R+A +TF S S +T+G+D + +++ +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSCLLLRFADNTF--SGSYITTIGVDFKIRTLEINGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQC--- 126
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN C
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNKVLVGNKNDCPSR 127
Query: 127 ------------HNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
+ + ++TS K VEEMF I + ++ RS+LE++
Sbjct: 128 KVVVTEDAQRFANQMNIPLFETSAKENINVEEMFLTITKMVL---RSKLEMK 176
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y + F S+ K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ + +F L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
+ GN N ST ++TS K VE+ F I R +
Sbjct: 119 PFVVLGNKIDLDNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL 174
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + +F + Q L EI YA E L GN N
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKSDLTN 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
Y +TS K+ VE+ F + +Q+ + R+ T+
Sbjct: 131 KKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQI----KDRMGSSTVNNQAG 186
Query: 174 GTDSFKLG 181
G + K+G
Sbjct: 187 GKSTLKVG 194
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 24/195 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGKSS+ R+ D F + +ST+G+D K+ +D ++++ +WDT G
Sbjct: 12 KLLMIGESNVGKSSIILRFTEDEF--HENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNNEQCH 127
ER ++T SYY+ + AILV+ + + +F L L E+ TY I + GN
Sbjct: 70 ERFRTLTPSYYRDGQGAILVYDVTDRVTFMKLETWLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLI----LSNRSRLELQTMG 169
N ST ++S KT +G++ F ++ +++I L +R L L++ G
Sbjct: 130 NREVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDRHTL-LKSYG 188
Query: 170 AGGIGTDSFKLGGRG 184
G IG+ + G RG
Sbjct: 189 NGNIGSTRHR-GQRG 202
>gi|93279886|pdb|2G6B|A Chain A, Crystal Structure Of Human Rab26 In Complex With A Gtp
Analogue
Length = 180
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 12 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 71 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 130
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG V+ F I ++L
Sbjct: 131 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 172
>gi|402237919|gb|AFQ38857.1| GTP-binding protein Ypt7 [Magnaporthe oryzae]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLW+T G ER S+ ++Y+ A+ +LVF ++N+ SF L E + A +N
Sbjct: 59 MQLWNTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ G E+ +IS+ ++TS K VE+ F I R +
Sbjct: 119 PFVVLGTKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|358392434|gb|EHK41838.1| hypothetical protein TRIATDRAFT_312376 [Trichoderma atroviride IMI
206040]
Length = 206
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 24/174 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR + MQLWDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVTMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A N + GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKI 128
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRS 161
E+ +IS+ ++TS K +++ F I R + S
Sbjct: 129 DVEESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQEES 182
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 141 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 198
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 199 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 252
>gi|341903589|gb|EGT59524.1| CBN-RAB-6.2 protein [Caenorhabditis brenneri]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 129
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 23/161 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD-RSIQMQLWDTGG 68
K++L G+ GVGKSSL RY D F S S +T+G+D K V D I++ +WDT G
Sbjct: 13 KLLLIGDSGVGKSSLLMRYTNDCFESQLS--ATIGVDFKVKHVTVPDGTKIKLSIWDTAG 70
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNN--- 123
ER ++T + Y+ + AA+ VF + N SF L+ + E+ TY++N + L GN
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNSWMEELKTYSDNPDMIKLLVGNKIDN 130
Query: 124 -------------EQCHNLISSTYKTSCKTGEGVEEMFADI 151
+ +N+ + +TS KT EGV ++F+D+
Sbjct: 131 ISREISREEGLRFSRLYNMPYA--ETSAKTSEGVNQLFSDV 169
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ GE GVGK+SL +Y F S+ K+T+G D KE V+DR +
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVEDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + ASF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N ST ++TS K VE+ F + + L+
Sbjct: 119 PFVVIGNKVDLDNRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKN-ALAQE 177
Query: 161 SRLEL 165
+ +EL
Sbjct: 178 TEVEL 182
>gi|209735274|gb|ACI68506.1| Ras-related protein Rab-6B [Salmo salar]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTGRGSDVIIMLVGNKTDLGD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 174
>gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella vectensis]
gi|156224507|gb|EDO45332.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN CH+ Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKN-ALAQE 177
Query: 161 SRLEL 165
+ +EL
Sbjct: 178 TDVEL 182
>gi|440802525|gb|ELR23454.1| Rasrelated protein ORAB-1, putative [Acanthamoeba castellanii str.
Neff]
Length = 210
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+ DTF + + ST+G+D + +D + I+MQ+WDT G
Sbjct: 9 KILMVGDSGVGKSSLLLRFTDDTF--TDNFISTIGVDFKIRTVNLDGKVIKMQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN 122
ER +ITSSYY+ A ILV+ + + SF+ Q L EI YA CGN
Sbjct: 67 ERFRTITSSYYRGAHGVILVYDVTDQVSFNNARQWLTEIERYA-------CGN 112
>gi|297283256|ref|XP_002802407.1| PREDICTED: ras-related protein Rab-26-like, partial [Macaca
mulatta]
Length = 215
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 24 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 82
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 83 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLAEIHEYAQHDVALMLLGNKVDSAH 142
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG V+ F I ++L
Sbjct: 143 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 184
>gi|348513460|ref|XP_003444260.1| PREDICTED: ras-related protein Rab-6B-like [Oreochromis niloticus]
Length = 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 174
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 3/134 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS+L R+ D F S KST+G++ K + + I+ Q+WDT G
Sbjct: 13 KIVLIGDSGVGKSNLLSRFTRDEFNLES--KSTIGVEFATKSIITEGKVIKAQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +SF + + L E+ +A+ N + L GN N
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDLRN 130
Query: 129 LISSTYKTSCKTGE 142
L + T + +C E
Sbjct: 131 LRTVTQEEACAFSE 144
>gi|402218984|gb|EJT99059.1| hypothetical protein DACRYDRAFT_24137 [Dacryopinax sp. DJM-731 SS1]
Length = 202
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQLWDT G
Sbjct: 7 KVIILGDSGVGKTSLMNQYVNKRF--SNQYKATIGADFLTKEVMVDDRLVTMQLWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ +++A SF L E + A EN + GN
Sbjct: 65 ERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKV 124
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQT 167
E+ +S ++TS K VE+ F I + L + +EL
Sbjct: 125 DVEESKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAKN-ALQQEAEVELYN 183
Query: 168 MGAGGIGTDS 177
I DS
Sbjct: 184 DYPDPIRIDS 193
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF + S ST+G+D K +D +S+++Q+WDT G
Sbjct: 81 KILIIGDSGVGKSSLLLRFSDDTF--NDSFLSTIGVDFKIKTVNIDKKSVKLQIWDTAGQ 138
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGN------ 122
ER +ITSSYYK A+ I+V+ + N SF + + L +I Y A + L GN
Sbjct: 139 ERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKKWLDDIEKYAAPSVTKMLVGNKIDVEA 198
Query: 123 NEQCHNLISSTYKTS 137
N Q + + Y TS
Sbjct: 199 NRQVKSQTAKDYATS 213
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF ++ + ++ + N I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQLI-------LSNRSRLELQ 166
L +T K TS K G V+ +F I L +++++
Sbjct: 139 KRQVTLEEATAKSTQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMEKENQADPNTKIDVT 198
Query: 167 TMGAGGI 173
T AG I
Sbjct: 199 TPTAGEI 205
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|67473169|ref|XP_652352.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469191|gb|EAL46966.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790054|dbj|BAD82823.1| small GTPase EhRabC3 [Entamoeba histolytica]
gi|407043332|gb|EKE41887.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702822|gb|EMD43384.1| small GTPase EhRabC3, putative [Entamoeba histolytica KU27]
Length = 208
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ +R+ +TF ST+G+D K KV +++++MQLWDT G
Sbjct: 11 KILIIGESGVGKTAIMQRFCENTF--EPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK--IFLCGNN---- 123
+R +IT+SYY+ + ++V+ + + ASF +S E+ EN I L GN
Sbjct: 69 DRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLM 128
Query: 124 ----------EQCHNLIS--STYKTSCKTGEGVEEMFADIGRQLI 156
EQ + T+ S K G G++E+F + + +I
Sbjct: 129 DHAAVKQEAVEQLARQLGGVQTFTCSAKDGSGIDEVFNALTQAII 173
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTIELDRKTIKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E+ L GN
Sbjct: 72 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVGNKCDLTT 131
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E L +TS K VE+ F + ++
Sbjct: 132 KKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEI 173
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD-RSIQMQLWDTGG 68
K++L G+ GVGKSSL RY D F S S +T+G+D K V D I++ +WDT G
Sbjct: 13 KLLLIGDSGVGKSSLLMRYTNDCFESQLS--ATIGVDFKVKLVTVPDGTKIKLSIWDTAG 70
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNN-EQ 125
ER ++T + Y+ + AA+ V+ + N SF L + E+ TY++N + L GN +
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVYDVANRESFDNLKIRMEELKTYSDNPNMIKLLVGNKIDS 130
Query: 126 CHNLIS-------------STYKTSCKTGEGVEEMFADI 151
LIS +TS KT EGV ++F+DI
Sbjct: 131 VPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDI 169
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 29/196 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL-------ILSNRSRLELQ 166
Y +TS K VE+ F + RQ+ +N+ +++
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNKPTVQV- 186
Query: 167 TMGAGGIGTDSFKLGG 182
GG G S GG
Sbjct: 187 ---TGGQGVQSGSAGG 199
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + +F + Q L EI YA E L GN N
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKSDLTN 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
Y +TS K+ VE+ F + +Q+ + R+ T+
Sbjct: 131 KKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQI----KDRMGSSTVNNQAG 186
Query: 174 GTDSFKLG 181
G + K+G
Sbjct: 187 GKSTLKVG 194
>gi|344296650|ref|XP_003420019.1| PREDICTED: ras-related protein Rab-6B-like [Loxodonta africana]
Length = 192
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|321476906|gb|EFX87865.1| hypothetical protein DAPPUDRAFT_95911 [Daphnia pulex]
Length = 177
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++D I++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGIF--PPGQGATIGVDFMIKTVEIDGLKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNE---- 124
ER SIT SYY+ A A ILV+ + +F L L E+ YA + L GN
Sbjct: 67 ERFRSITQSYYRSAHALILVYDVSAQPTFDCLPVWLREVEEYASPKVLRVLVGNKVDRDD 126
Query: 125 --------QCHNLISSTY--KTSCKTGEGVEEMFADIGRQLI 156
+ + +++ Y +TS K V+++F +I R+LI
Sbjct: 127 REIPPAVGEAFSRMNNMYFIETSAKDCSNVDKLFQEIARELI 168
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|167393508|ref|XP_001740606.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895241|gb|EDR22979.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 208
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ +R+ +TF ST+G+D K KV +++++MQLWDT G
Sbjct: 11 KILIIGESGVGKTAIMQRFCENTF--EPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK--IFLCGNN---- 123
+R +IT+SYY+ + ++V+ + + ASF +S E+ EN I L GN
Sbjct: 69 DRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLM 128
Query: 124 ----------EQCHNLIS--STYKTSCKTGEGVEEMFADIGRQLI 156
EQ + T+ S K G G++E+F + + +I
Sbjct: 129 DHAAVKQEAVEQLARQLGGVQTFTCSAKDGSGIDEVFNALTQAII 173
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 22/193 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLQEIDRYASETVNKLLVGNKSDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMF----ADIGRQLILSNRSRLELQTMG 169
E L +TS K VE+ F A+I ++ ++ + Q++
Sbjct: 128 KKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVFPAKEKGQSIN 187
Query: 170 AGGIGTDSFKLGG 182
GG T + GG
Sbjct: 188 IGGSTTIAKPQGG 200
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 9 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 67 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 126
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 127 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 168
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 33 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 90
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN
Sbjct: 91 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 150
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K+ VE+ F + RQ+
Sbjct: 151 KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 192
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL------ILSNRSRLELQT 167
Y +TS K VE+ F + RQ+ +N ++ +
Sbjct: 128 KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTKPSVHV 187
Query: 168 MGAGGIGTDS 177
G+G S
Sbjct: 188 GQGQGVGNSS 197
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + +D +++Q+WDT G
Sbjct: 58 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQ 115
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--------------VTYAENA 115
ER +ITS+YY+ I+V+ + + SF + + L EI A N
Sbjct: 116 ERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNE 175
Query: 116 KIFLCGNNEQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
K+ L + ++ N + ++TS K V+EMF I RQ++ + + R E Q +
Sbjct: 176 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAI 229
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 56 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 113
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 114 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 173
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 174 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 215
>gi|388852994|emb|CCF53442.1| probable GTP-binding protein [Ustilago hordei]
Length = 246
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 21/199 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K I+ GE G GKS L + ++ F S+ T+G++ ++ K+ ++S+++QLWDT G
Sbjct: 18 KFIIIGEAGTGKSCLLHHFIHNQFKDQSAH--TIGVEFSSRLIKIGNKSVKLQLWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER S+T SYY+ A AA+LV+ + ++F LS+ L + A + + L GN
Sbjct: 76 ERFRSVTRSYYRGAAAALLVYDITKRSTFEPLSRWLTDARALASPDLAVVLVGNKTDRGE 135
Query: 124 --EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRS-RLELQTMGAG 171
+ L +S + +TS TGE VE FA R ++L+ S +L+ + G+G
Sbjct: 136 DEREVGYLEASKWANENGVLFLETSSMTGENVEAPFALAARSILLAIESGKLDPEKAGSG 195
Query: 172 -GIGTDSFKLGGRGSEEVF 189
G + + G GS F
Sbjct: 196 VSYGDRALRRVGSGSRFSF 214
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTYK---------------TSCKTGEGVEEMFADIGRQL 155
Y+ TS K VE+ F + RQ+
Sbjct: 128 KKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|83754993|pdb|2EW1|A Chain A, Crystal Structure Of Rab30 In Complex With A Gtp Analogue
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 85
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 86 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 145
Query: 123 ----NEQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLILSNR 160
++Q S +TS K + VE++F D+ +LI R
Sbjct: 146 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 192
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 16 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 74 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 133
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 134 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 175
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + +F + Q L EI YA E L GN
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYASEGVNKLLVGNKSDLTS 128
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + +Q+ + R+ + AGG
Sbjct: 129 KKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQI----KDRMGSTSTPAGGA 184
Query: 174 GTDSFKLG 181
+ + G
Sbjct: 185 KSTTITPG 192
>gi|327286112|ref|XP_003227775.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 138
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S++ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVGN 121
>gi|392595561|gb|EIW84884.1| GTP binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 214
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF ++ + ++ + N I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIEDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
L +T K TS K G V+ +F I L
Sbjct: 139 KRQVTLEEATTKSTEMNIMFMETSAKAGHNVKSLFKKIALSL 180
>gi|348584804|ref|XP_003478162.1| PREDICTED: ras-related protein Rab-26-like [Cavia porcellus]
Length = 251
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 60 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGMKVKLQIWDTAGQ 118
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN----- 123
ER S+T +YY+ A A +L++ + N ASF + L EI YA++ + L GN
Sbjct: 119 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQDDVVLMLLGNKVDSAQ 178
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
E+ Y +TS KTG +E F I ++L
Sbjct: 179 ERVVKREDGEKLAKEYGLPYMETSAKTGINIELAFTAIAKEL 220
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 22/189 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + +F + Q L EI YA E L GN N
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYACEGVNKLLVGNKSDLTN 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
Y +TS K+ VE+ F + +Q+ + R+ T+
Sbjct: 131 KKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQI----KDRMGSSTVNNQAG 186
Query: 174 GTDSFKLGG 182
G + K+G
Sbjct: 187 GKSTLKVGA 195
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAKLLGAKIFMETSTKEGYNVKALFKKIAKSL 173
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ L L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDRYACENVNKLLVGN 121
>gi|237831479|ref|XP_002365037.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962701|gb|EEA97896.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487113|gb|EEE25359.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
gi|221506799|gb|EEE32416.1| rab12, putative [Toxoplasma gondii VEG]
Length = 238
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R++ D F + S +T+G+D + VD+ +++Q+WDT G
Sbjct: 36 KLVLIGDSGVGKSCLLLRFSDDAF--TESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQ 93
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITS+YY+ A+ +LV+ + + SF + + L E+ YA EN L GN
Sbjct: 94 ERFRTITSAYYRGADGIVLVYDVTDRESFLHVDEWLAEVNRYANENTCKILVGNKCEKAD 153
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ L S +TS K V+E F + R+LI
Sbjct: 154 DRQVSVEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELI 196
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYVDSYI--STIGVDFKIRTIELDGKAIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGN 121
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 72 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 131
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K+ VE+ F + RQ+
Sbjct: 132 KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 173
>gi|221116505|ref|XP_002158899.1| PREDICTED: ras-related protein Rab-35-like [Hydra magnipapillata]
Length = 203
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 20/182 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSS+ R+A D F S S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSILLRFADDMF--SGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQC-HN 128
ER +ITS+YY+ I+V+ + NA SF + + L EI + L GN C N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTNAESFVNVKRWLHEIDQNCDVVNKVLVGNKNDCLKN 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNR---SRLELQTMGAG 171
+ T ++TS K +E++F+ I ++ S R S++ Q G
Sbjct: 128 KVVDTQDAKTFAAQMGVEVFETSAKDNLNIEQVFSHITAMVLRSKREQQSKVLEQKHSQG 187
Query: 172 GI 173
G+
Sbjct: 188 GM 189
>gi|158343289|gb|ABW35317.1| Rab1B [Gymnochlora stellata]
Length = 206
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A T+ + + ST+G+D + +D ++I++Q+WDT G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADQTY--TPNYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN N
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYDVTDIDSFNNVKQWLCEIDRYACENVNKLLVGNKCDMEN 132
Query: 129 --------------LISSTYKTSCKTGEGVEEMFADIGRQL 155
L +TS KTG+ VE F + ++
Sbjct: 133 KAVDYATAKHFADQLEIPFIETSAKTGDQVEFAFVKMAAEI 173
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 6 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 64 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 123
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 124 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 165
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL------ILSNRSRLELQT 167
Y +TS K VE+ F + RQ+ +N ++ +
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTKPSVHV 187
Query: 168 MGAGGIGTDS 177
G+G S
Sbjct: 188 GQGQGVGNSS 197
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 24/169 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ G+ GVGKSSL ++Y + F S+ K+T+G D NKE ++ R + MQ+WDT G
Sbjct: 10 KVVILGDSGVGKSSLMQQYVNNKF--STQYKATIGADFLNKELTLEGRKVNMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L+ E + A EN + GN
Sbjct: 68 ERFQSLGLAFYRGADCCVLVYDVNNSKSFDALTLWRDEFLLLANPRDPENFPFVVIGNKV 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
E+ +S+ ++TS K GV++ F + R +
Sbjct: 128 DVEESKRAVSAKRAQAFCKATGNIPYFETSAKEDTGVDQAFETVARNAM 176
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+A D F S +ST+G++ K +VDDR ++ Q+WDT G
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEF--SLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A++V+ + +F + L E+ + + N + L GN +
Sbjct: 79 ERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNKADLRH 138
Query: 129 L 129
L
Sbjct: 139 L 139
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 92
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 93 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 152
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 153 KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 194
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K+ VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 169
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 18/164 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 130
Query: 129 ------LISSTY---------KTSCKTGEGVEEMFADIGRQLIL 157
I+ Y +TS K VE+ F + ++ L
Sbjct: 131 KKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKL 174
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQI 169
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 18/166 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL GE GVGK+SL RY ++F KST+G D +K + + +Q+WDT G
Sbjct: 8 KIILIGESGVGKTSLINRYVENSF--DPVYKSTIGCDFLSKNVQYEGVEYVLQIWDTAGH 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNN----- 123
E+ +S+ SS+Y+ ++ A +VF + + ASF L + E N I +CGN
Sbjct: 66 EKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINEFSGSINNDVPIIVCGNKTDLEN 125
Query: 124 --------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+Q +L + TY ++S K+ GV +MFA I + LI+ N+
Sbjct: 126 RCVPTASAQQWCDLRNYTYVESSAKSSAGVTDMFATIVK-LIVDNK 170
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|395335642|gb|AFN54651.1| Rab GTPase [Litopenaeus vannamei]
Length = 211
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFXSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVGN 121
>gi|396082089|gb|AFN83701.1| GTP-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 203
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ GE VGK+ L +Y D F S +T+G+D +K ++ ++I + +WDT G
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDF--KQSLMTTIGVDTVSKSIVLNGKNIMLNIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNE----- 124
ER SIT SYY+ A+ +L+F + + +F + + I N +FL GN
Sbjct: 69 ERFFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRDKVDS 128
Query: 125 ------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ + + Y TS KTGE V +F D+ L+
Sbjct: 129 ATYHAMEGNFKSKAEEMKARYYTTSAKTGENVNNIFEDMAMVLL 172
>gi|332240060|ref|XP_003269208.1| PREDICTED: ras-related protein Rab-26 [Nomascus leucogenys]
Length = 271
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 80 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 138
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 139 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 198
Query: 128 NL---------ISSTY-----KTSCKTGEGVEEMFADIGRQL 155
++ Y +TS KTG V+ F I ++L
Sbjct: 199 ERAVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 240
>gi|145539235|ref|XP_001455312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423111|emb|CAK87915.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 19/164 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R+ F + S ST+G+D K + D++I+MQ+WDT G
Sbjct: 9 KIVLIGSQNVGKSSLMARFIDQVF--NDSYLSTVGVDFRIKTLSIHDKTIKMQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFH--------VLSQH-LLEIVTY-------AE 113
ER ++T S+YK A I VF + N SF V+ +H L+ Y
Sbjct: 67 ERFQALTQSHYKGAHGCIAVFDVTNERSFEDAKKFLKLVIEEHGLIPEACYLIANKVDLV 126
Query: 114 NAKIFLCGN-NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
N ++ L N N+ H + + +TS KTG+ V ++F D+G+ ++
Sbjct: 127 NKRVILGKNGNDFAHEIGVNYLETSAKTGDNVNQLFLDLGKIIL 170
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLAD 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
+ ++SS +TS K VE+ F + ++
Sbjct: 128 NKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEI 169
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N + L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAE 128
Query: 124 ------EQCHNLISST----YKTSCKTGEGVEEMFADIGRQLI 156
++ + S +TS K + VE++F D+ +LI
Sbjct: 129 KREVVRQRAEDFAQSQSMLYLETSAKESDNVEKLFLDLACELI 171
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 50 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 107
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 108 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVGN 161
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 23/180 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIERYACDNVNKLLVGNKSDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQT-MGAGG 172
E L +TS K+ VE+ F + + L R+ QT MG G
Sbjct: 128 KKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAHIKL----RVGPQTSMGDQG 183
>gi|256085306|ref|XP_002578863.1| rab6 [Schistosoma mansoni]
gi|350645823|emb|CCD59585.1| rab6, putative [Schistosoma mansoni]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 20/174 (11%)
Query: 1 MASIKVPEQK--VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRS 58
MA P QK ++ GE VGK+SL R+ Y+TF + ++T+G+D +K ++DR+
Sbjct: 1 MADFNNPLQKFKLVFLGEQSVGKTSLITRFMYETF--DNLYQATIGIDFLSKTMYLEDRT 58
Query: 59 IQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKI 117
I++QLWDT G ER S+ SY + + AA++V+ + NA SFH S+ + ++ + I
Sbjct: 59 IRLQLWDTAGQERFRSLIPSYIRDSSAAVVVYDICNAGSFHQASKWVDDVRNERGGDVII 118
Query: 118 FLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
L GN + T +TS K G V+ +F I +L+
Sbjct: 119 ILVGNKTDLSDKRKVTTEEGELLAKKLEVMFIETSAKAGYNVKVLFRRIATELV 172
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 17/178 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK+S+ RRY F S+ T+G+D K V+ +I++Q+WDT G
Sbjct: 10 KIVLIGDAGVGKTSIVRRYTDGVFTSAGI--PTIGVDFCIKTLSVNGSAIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-----N 123
ER +IT SYY+ A+A +LV+ + +A +F L + L E+ YA L GN +
Sbjct: 68 ERFRTITQSYYRSADAIVLVYDIGSATTFRNLPEWLSEVDRYAGTTVHKILIGNKSDRTD 127
Query: 124 EQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ + S + +TS K+ + ++ +F + + L ++ + Q G G
Sbjct: 128 REIQTHLGSQFAQENDMPFLETSAKSADNIDNLFEQLAKTLRDTHMHKGIKQNTGGGA 185
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 28 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 85
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 86 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 145
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 146 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 187
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 23/179 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R++ D F + S +T+G+D + VD+ +++Q+WDT G
Sbjct: 15 KLVLIGDSGVGKSCLLLRFSDDAF--TESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITS+YY+ A+ +LV+ + + SF + + L E+ YA EN L GN
Sbjct: 73 ERFRTITSAYYRGADGIVLVYDVTDRDSFGHVDEWLAEVNRYANENTCKILVGNKCEKAD 132
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ L S +TS K V+E F + R+LI +++ AGG
Sbjct: 133 DRQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELI-----KMKQSASAAGG 186
>gi|66730270|ref|NP_001019497.1| ras-related protein Rab-19 [Rattus norvegicus]
gi|81889125|sp|Q5M7U5.1|RAB19_RAT RecName: Full=Ras-related protein Rab-19
gi|56789734|gb|AAH88443.1| RAB19, member RAS oncogene family [Rattus norvegicus]
gi|149065308|gb|EDM15384.1| similar to RAB19, member RAS oncogene family [Rattus norvegicus]
Length = 217
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + S S+++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFKSGVY--SESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K ++E+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYVGSYI--STIGVDFKIRTIELDGKAIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGN 121
>gi|432102772|gb|ELK30248.1| Ras-related protein Rab-30 [Myotis davidii]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLIREAR 175
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ GE GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N ST ++TS K VE+ F + + L+
Sbjct: 119 PFVVIGNKVDLDNRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKN-ALAQE 177
Query: 161 SRLEL 165
+ +EL
Sbjct: 178 TDVEL 182
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 22/182 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSD 127
Query: 129 --LISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
++SS +TS K VE+ F + ++ ++R+ Q +
Sbjct: 128 KKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEI----KNRMASQPANSARP 183
Query: 174 GT 175
T
Sbjct: 184 AT 185
>gi|336367247|gb|EGN95592.1| hypothetical protein SERLA73DRAFT_186692 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379967|gb|EGO21121.1| hypothetical protein SERLADRAFT_475872 [Serpula lacrymans var.
lacrymans S7.9]
Length = 214
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF S+ + ++ + N I L GN +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
L +T K TS K G V+ +F I L
Sbjct: 139 KRQVTLEEATAKSTQLNIMFMETSAKAGHNVKGLFKKIAMSL 180
>gi|195114920|ref|XP_002002015.1| GI14260 [Drosophila mojavensis]
gi|193912590|gb|EDW11457.1| GI14260 [Drosophila mojavensis]
Length = 208
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ +L +TS K G V+++F + L
Sbjct: 132 KRQVSTEEGERKAKDLNVMFIETSAKAGYNVKQLFRRVAAAL 173
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--NGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHN- 128
ER +ITS+YY+ I+V+ + + SF + + L EI + L GN N
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDSPNE 127
Query: 129 --------------LISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+ ++TS K V+EMF I RQ++ + + R E Q +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAI 181
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLEA 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
+ +Y +TS K VE+ F + + + ++ LQTM A
Sbjct: 128 NRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKIEWQAN--LQTMQA 182
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ DTF S KST+G++ + +D + I+ Q+WDT G
Sbjct: 29 KVVLIGDSGVGKSNLLSRFTRDTFDLES--KSTIGVEFATRNVNIDGKVIKAQIWDTAGQ 86
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN 122
ER +ITS+YY+ A A++V+ + SFH L+ L E+ +AE N + L GN
Sbjct: 87 ERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 140
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTT 128
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
++ +T +TS K VE+ F + ++ + R+ L+ +
Sbjct: 129 KKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI----KKRMGLEVL 179
>gi|336381842|gb|EGO22993.1| hypothetical protein SERLADRAFT_471590 [Serpula lacrymans var.
lacrymans S7.9]
Length = 241
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R++ + ++ +T+G+D + +V+ R +++ +WDT G
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN---NEQ 125
ER ITSSYY+ A+ ILV+ + N SF L + E+ TY + + + GN EQ
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPKWFSELETYVPDTVVRIIVGNKVDKEQ 139
Query: 126 CHNLISST------------YKTSCKTGEGVEEMFAD-IGRQL 155
+ +S + S KT GV F D +GR L
Sbjct: 140 SRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRIL 182
>gi|432898518|ref|XP_004076541.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 89/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ ++ + +TS KTG V+++F + L
Sbjct: 133 KRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAAL 174
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +F L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQASPRDPENF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN CH+ + Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDLENRAVSAKRAQAWCHSKNNIPYFETSAKEAINVEQAFQTIAKN-ALAQE 177
Query: 161 SRLEL 165
+ +EL
Sbjct: 178 TDVEL 182
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKSS+ R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 13 KVVLIGDSGVGKSSVLSRFTRNEFNMDS--KSTIGVEFATRSLEVDQKTIKAQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +SF + + L E+ +A+ N I L GN +
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDLKH 130
Query: 129 L 129
L
Sbjct: 131 L 131
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 17 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN
Sbjct: 75 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 134
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + RQ+
Sbjct: 135 KKVVEYTMAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 176
>gi|315044527|ref|XP_003171639.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|327297278|ref|XP_003233333.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|311343982|gb|EFR03185.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|326464639|gb|EGD90092.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|326472371|gb|EGD96380.1| vacuolar biogenesis protein [Trichophyton tonsurans CBS 112818]
gi|326481596|gb|EGE05606.1| vacuolar biogenesis protein [Trichophyton equinum CBS 127.97]
Length = 205
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y + S+S K+T+G D KE VD R +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKY--SASYKATIGADYLTKEVMVDGRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F I + ++
Sbjct: 119 PFVVLGNKIDVEESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALMQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF S S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVVIDGMRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIIVYDVTNGESFANVRRWLDEIQNNCDVVNKVLVGNKNDDPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T ++TS K VEEMF I RQ++
Sbjct: 128 KVVITEDAQRFARQMDIELFETSAKDNVNVEEMFLSITRQVL 169
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D +KE +VDDR +
Sbjct: 1 MASRKKLLLKVIILGDSGVGKTSLMNQYVSKKF--SNQYKATIGADFLSKEVRVDDRIVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +SF L E + A +N
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN + C + + Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKVDLESRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQAIAKN-ALAQE 177
Query: 161 SRLEL 165
S +EL
Sbjct: 178 SEVEL 182
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +KVD + ++ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLES--KSTIGVEFATRTFKVDGKVVKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
L++ +TS VE+ FA++ Q+
Sbjct: 133 LLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQI 174
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 21 KVVLVGDSGVGKSNLLSRFTRNAF--SLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNN 123
ER +ITS+YY+ A A+LV+ + A +F ++ L E+ +A+ A + L GN
Sbjct: 79 ERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNK 134
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF ++ + ++ + N I L GN +
Sbjct: 80 ERFRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGNKADLSD 139
Query: 129 -----LISSTYK----------TSCKTGEGVEEMFADIGRQL 155
L +T K TS K G V+ +F I L
Sbjct: 140 KRQVTLEEATAKATQLNIMFMETSAKAGHNVKGLFKKIAMSL 181
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-NEQCH 127
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN N+
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTA 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
N + S +TS K VE+ F + ++
Sbjct: 128 NKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 22/182 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSD 127
Query: 129 --LISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
++SS +TS K VE+ F + ++ ++R+ Q +
Sbjct: 128 KKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEI----KNRMASQPANSARP 183
Query: 174 GT 175
T
Sbjct: 184 AT 185
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 27/196 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL-------ILSNRSRLELQ 166
Y +TS K VE+ F + RQ+ I +N ++ +
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKANVN 187
Query: 167 TMGAGGIGTDSFKLGG 182
A G G + + GG
Sbjct: 188 V--APGHGVSNNQSGG 201
>gi|339717366|pdb|2Y8E|A Chain A, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
gi|339717367|pdb|2Y8E|B Chain B, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
Length = 179
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 16 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 74 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 133
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 134 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 175
>gi|145488631|ref|XP_001430319.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397416|emb|CAK62921.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E KV+L G+ GVGKSS+ R+ D F + +STLG + +V+ + + Q+WDT
Sbjct: 4 EVKVVLLGDSGVGKSSIVLRFCSDIF--KVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN---- 122
G E+ S+T YY+ A+ A++V+ + + SF VL + E+ + I L GN
Sbjct: 62 GQEKYKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDL 121
Query: 123 -----------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
N + +S TSCK +G++E+F I Q++ +++L
Sbjct: 122 IEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKL 173
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative [Tribolium
castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF S S +T+G+D K +D + +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--SGSYITTIGVDFKIKTVSLDGQKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNRVLVGNKNDTPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+ T ++TS K VEEMF I R ++ S + E Q +
Sbjct: 128 KVVLTEDAQRFADTMNIQLFETSAKDNVNVEEMFMAITRLVLRSKQEMKERQNI 181
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ GVGK+SL +Y F + K+T+G D KE +VDD+ + MQ+WDT G
Sbjct: 10 KIIILGDSGVGKTSLMNQYVQKKF--TKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
ER S+ S++Y+ A+ +LVF ++NA SF L E + A
Sbjct: 68 ERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQA 110
>gi|403280621|ref|XP_003931814.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGMRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN--NEQ 125
ER S+T +YY+ A+A +L++ + N ASF + L EI YA+ + I L GN +
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
Query: 126 CHNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
+I S +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|403072074|pdb|4FMC|F Chain F, Espg-Rab1 Complex
Length = 117
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G E
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 58
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
R +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 59 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 111
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 23 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 80
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 81 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 140
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 141 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 182
>gi|291399811|ref|XP_002716636.1| PREDICTED: RAB6B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 208
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 69 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 122
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 22/171 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTT 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
E +L +TS K VE+ F + ++ + R+E
Sbjct: 128 KKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI----KKRME 174
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCDLAD 127
Query: 129 LISSTYKTS 137
+ +Y+T+
Sbjct: 128 KRAVSYETA 136
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|336369061|gb|EGN97403.1| hypothetical protein SERLA73DRAFT_184094 [Serpula lacrymans var.
lacrymans S7.3]
Length = 235
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R++ + ++ +T+G+D + +V+ R +++ +WDT G
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN---NEQ 125
ER ITSSYY+ A+ ILV+ + N SF L + E+ TY + + + GN EQ
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPKWFSELETYVPDTVVRIIVGNKVDKEQ 139
Query: 126 CHNLISST------------YKTSCKTGEGVEEMFAD-IGRQL 155
+ +S + S KT GV F D +GR L
Sbjct: 140 SRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRIL 182
>gi|426228109|ref|XP_004008157.1| PREDICTED: ras-related protein Rab-19 [Ovis aries]
Length = 217
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWE 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ H L + + +TS K + ++E+F + R+L+ R L L GA G
Sbjct: 137 KRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELM--ARHSLPLHGGGAPG 194
>gi|50927456|gb|AAH78662.1| RAB6B protein [Homo sapiens]
Length = 208
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLAGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+LF R+ + F S KST+G++ + +V+ R ++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLFSRFTRNEFCLES--KSTIGVEFATRTLEVEGRMVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + SF +++ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 130
Query: 129 LISSTYKTS 137
Y T+
Sbjct: 131 KKVVDYTTA 139
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ G GKSSL R+ D F+ ++ST+G F++ V+D +++ ++WDT G
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+ YY+ A AAI+VF + N ASF + + E+ N + L GN +
Sbjct: 72 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 131
Query: 129 LI------SSTY---------KTSCKTGEGVEEMFADIGRQL 155
+ TY +TS KT V+E+F +I R+L
Sbjct: 132 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 173
>gi|389583987|dbj|GAB66721.1| small GTPase Rab6 [Plasmodium cynomolgi strain B]
Length = 207
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 71 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F I +L
Sbjct: 131 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKL 172
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 77/120 (64%), Gaps = 4/120 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + ++D+++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQIDNKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN-NEQCH 127
ER +ITS+YY+ A A+LV+ + + SF +++ L E+ +A+ N I L GN +Q H
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQRH 128
>gi|258597414|ref|XP_001348128.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
gi|254832720|gb|AAN36041.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 71 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 130
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F I +L
Sbjct: 131 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 172
>gi|126343561|ref|XP_001362312.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS L R+A DT+ S S ST+G+D + ++D + +++Q+WDT G
Sbjct: 10 KVLLIGDSGVGKSCLLLRFADDTY--SDSYVSTIGVDFKIRTIQLDGKIVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY A ILV+ + + S+ + Q L+E+ +A N L GN
Sbjct: 68 ERFRTITSSYYHGAHGIILVYDVSDPKSYANVKQWLIEVERHANRNTNKLLVGNKSDLVT 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMF 148
N++ T +TS K V+E+F
Sbjct: 128 KNMVDRTIAKEFADSIGIPFLETSAKNSINVDEVF 162
>gi|344293727|ref|XP_003418572.1| PREDICTED: ras-related protein Rab-30-like [Loxodonta africana]
Length = 205
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 13 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 71 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 130
Query: 123 ----NEQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLILSNR 160
++Q S +TS K + VE++F D+ +LI R
Sbjct: 131 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 177
>gi|395531204|ref|XP_003767672.1| PREDICTED: ras-related protein Rab-7b-like [Sarcophilus harrisii]
Length = 200
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M ++K + K+I+ G GVGK+SL +Y + TF ++TLG +K +D+ +++
Sbjct: 1 MDAMKKIDLKLIIIGALGVGKTSLLHQYVHKTF--YEDYQTTLGASILSKVIMIDNTTLK 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLS----QHLLEIVTYAENAK 116
+Q+WDTGG ER SI S++YK ++ IL F + N SFH L L ++V +
Sbjct: 59 LQIWDTGGQERFRSIISTFYKGSDGCILAFDVTNRDSFHALDIWRGDILQKVVPMEQVFP 118
Query: 117 IFLCGNN--------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ + GN + C ++ S K VE+ F + RQ + +R
Sbjct: 119 MVVLGNKIDLDDREVSQEKALDWCKEKDIPYFEVSAKNDINVEQAFELLARQALAQHREI 178
Query: 163 LELQTMGAGGIGTDSFKLGGRGSEE 187
+ TDS KL G +
Sbjct: 179 FD-------NYLTDSIKLSPAGKPK 196
>gi|240275387|gb|EER38901.1| vacuolar biogenesis protein [Ajellomyces capsulatus H143]
gi|325091228|gb|EGC44538.1| vacuolar biogenesis protein [Ajellomyces capsulatus H88]
Length = 317
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y + SSS K+T+G D K+ VDDR +
Sbjct: 113 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKY--SSSYKATIGADYLTKDVLVDDRLVT 170
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
+QLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E+
Sbjct: 171 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESF 230
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +ISS ++TS K VE+ F +I + +
Sbjct: 231 PFVVLGNKIDVEESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALAQ 290
Query: 159 NRS 161
S
Sbjct: 291 EES 293
>gi|33859608|ref|NP_035356.1| ras-related protein Rab-19 [Mus musculus]
gi|158518382|sp|P35294.3|RAB19_MOUSE RecName: Full=Ras-related protein Rab-19
gi|21411203|gb|AAH32936.1| RAB19, member RAS oncogene family [Mus musculus]
gi|112292995|dbj|BAF02875.1| Rab19 [Mus musculus]
gi|148681662|gb|EDL13609.1| RAB19, member RAS oncogene family [Mus musculus]
Length = 217
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + S S+++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFKSGVY--SESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K ++E+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ S ST+G+D + +++ ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLFRFADDTY--QESYISTIGVDFKIRTVELEGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLSEIDRYANENVNKLLVGNKSDLTS 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
Y +TS K VE+ F + ++ ++R+ Q A G
Sbjct: 128 KKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEI----KTRMASQPQAASG 182
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 130 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 187
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 188 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 247
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 248 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 289
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS + R++ D+F ++S +T+G+D + ++D R +++Q+WDT G
Sbjct: 18 KLLLIGDSGVGKSCVLLRFSDDSF--TTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN---EQ 125
ER +IT++YY+ A ILV+ + + +SF+ + + I A EN L GN ++
Sbjct: 76 ERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVGNKADMDE 135
Query: 126 CHNLISST-------------YKTSCKTGEGVEEMF----ADIGRQLILSNRSRLEL 165
+++ ++TS KTG+ VEE F DI R+L S +R E+
Sbjct: 136 SKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARPEV 192
>gi|291190162|ref|NP_001167341.1| ras-related protein Rab-9A [Salmo salar]
gi|223649322|gb|ACN11419.1| Ras-related protein Rab-9A [Salmo salar]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F + T+G++ NK+ +VD R + MQ+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKF--DTHLFHTIGVEFLNKDLEVDGRLVTMQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ ++ +L FS+D+ SFH L+ E + YA+
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDNQSFHNLANWKKEFIYYAD 110
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 12 KIVLIGDSGVGKSNLLSRFTRNEFNLES--KSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + AS+ +S+ L E+ +A+ N I L GN +
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNKSDLKH 129
Query: 129 LISSTYKTSCKTGE 142
L + + + K E
Sbjct: 130 LRAVPKEEATKFAE 143
>gi|291416041|ref|XP_002724256.1| PREDICTED: RAB26, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 256
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGSF-ISTVGIDFRNKALDVDGTKVKLQIWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN--EQCH 127
ER S+T +YY+ A A +L++ + N ASF+ + L EI +A++ + + N + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDITNKASFNNIQAWLAEIREHAQHDVVLMLLANKVDSAH 183
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFRAIAKEL 225
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|149723329|ref|XP_001497263.1| PREDICTED: ras-related protein Rab-37-like isoform 2 [Equus
caballus]
Length = 216
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ +++ Y +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 2 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDAKTIKLQIWDTAGQ 59
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 60 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTA 119
Query: 129 LISSTYKTS 137
+ +Y+T+
Sbjct: 120 NRAVSYETA 128
>gi|440493727|gb|ELQ76160.1| putative Ras small GTPase [Trachipleistophora hominis]
Length = 213
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ GE VGK+S+ +R+ D F +S ST+G+D K VD +++ +WDT G
Sbjct: 22 KIIILGESYVGKTSIAQRFVNDEF--DTSLFSTIGIDLLKKTVTVDGAKVRLNIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER SIT SYY+ A+ ILVF L + SF + + I EN IFL GN
Sbjct: 80 ERFHSITKSYYRCADGIILVFDLLDLKSFDSIDRWFEGIHRETDENVPIFLVGNKYDDAE 139
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E+ ++ + TS KTG +E +F + +L
Sbjct: 140 HRVDFVLDVFEEKARSMNVEFFVTSAKTGLNIELLFTRMAEEL 182
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|145476009|ref|XP_001424027.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391089|emb|CAK56629.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E KV+L G+ GVGKSS+ R+ D F + +STLG + +V+ + + Q+WDT
Sbjct: 4 EVKVVLLGDSGVGKSSIVLRFCSDIF--KVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN---- 122
G E+ S+T YY+ A+ A++V+ + + SF VL + E+ + I L GN
Sbjct: 62 GQEKYKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDL 121
Query: 123 -----------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
N + +S TSCK +G++E+F I Q++ +++L
Sbjct: 122 IEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKL 173
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + + +T+G+D + +VD +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--TGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ ++V+ + N SF + + L EI + L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIG 174
+ T ++TS K VEEMF I R ++ S + + E Q +
Sbjct: 128 KVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQ-----VP 182
Query: 175 TDSFKLGGRGSEE 187
D KL G ++
Sbjct: 183 EDKLKLKPGGHKK 195
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 130
Query: 129 LISSTYKTS 137
Y T+
Sbjct: 131 KKVVDYTTA 139
>gi|383848737|ref|XP_003700004.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|2598565|emb|CAA56644.1| rab19 [Mus musculus]
Length = 217
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + S S+++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFKSGVY--SESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSN 159
+ H L + +TS K ++E+F + ++LI N
Sbjct: 137 KRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARN 183
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDAKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTA 127
Query: 129 LISSTYKTS 137
+ +Y+T+
Sbjct: 128 NRAVSYETA 136
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|311266846|ref|XP_003131277.1| PREDICTED: ras-related protein Rab-37-like isoform 3 [Sus scrofa]
Length = 216
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ +++ Y +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS + R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCILLRFADDTY--TESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S++ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGN 121
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTMKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|30424655|ref|NP_776142.1| ras-related protein Rab-6B [Mus musculus]
gi|96975097|ref|NP_057661.3| ras-related protein Rab-6B [Homo sapiens]
gi|155371985|ref|NP_001094599.1| ras-related protein Rab-6B [Bos taurus]
gi|386781658|ref|NP_001248165.1| ras-related protein Rab-6B [Macaca mulatta]
gi|126325809|ref|XP_001364646.1| PREDICTED: ras-related protein Rab-6B-like [Monodelphis domestica]
gi|296228059|ref|XP_002759647.1| PREDICTED: ras-related protein Rab-6B [Callithrix jacchus]
gi|297672009|ref|XP_002814108.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pongo abelii]
gi|301777392|ref|XP_002924114.1| PREDICTED: ras-related protein Rab-6B-like [Ailuropoda melanoleuca]
gi|311269411|ref|XP_003132476.1| PREDICTED: ras-related protein Rab-6B-like [Sus scrofa]
gi|348582027|ref|XP_003476778.1| PREDICTED: ras-related protein Rab-6B-like [Cavia porcellus]
gi|395519193|ref|XP_003763735.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Sarcophilus
harrisii]
gi|395832821|ref|XP_003789452.1| PREDICTED: ras-related protein Rab-6B [Otolemur garnettii]
gi|397503903|ref|XP_003822554.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pan paniscus]
gi|402861531|ref|XP_003895143.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Papio anubis]
gi|403265826|ref|XP_003925113.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Saimiri
boliviensis boliviensis]
gi|426218278|ref|XP_004003376.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Ovis aries]
gi|426342170|ref|XP_004036386.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Gorilla gorilla
gorilla]
gi|13633595|sp|Q9NRW1.1|RAB6B_HUMAN RecName: Full=Ras-related protein Rab-6B
gi|47117095|sp|P61294.1|RAB6B_MOUSE RecName: Full=Ras-related protein Rab-6B
gi|229891504|sp|A6QR46.1|RAB6B_BOVIN RecName: Full=Ras-related protein Rab-6B
gi|7385001|gb|AAF61637.1|AF166492_1 small GTPase RAB6B [Homo sapiens]
gi|20379056|gb|AAM21088.1|AF498940_1 small GTP binding protein RAB6B [Homo sapiens]
gi|12803379|gb|AAH02510.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|26331000|dbj|BAC29230.1| unnamed protein product [Mus musculus]
gi|30583365|gb|AAP35927.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|38148674|gb|AAH60618.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|60655043|gb|AAX32085.1| RAB6B [synthetic construct]
gi|112292963|dbj|BAF02859.1| Rab6B [Mus musculus]
gi|119599564|gb|EAW79158.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119599565|gb|EAW79159.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148689117|gb|EDL21064.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|151557109|gb|AAI50112.1| RAB6B protein [Bos taurus]
gi|168279011|dbj|BAG11385.1| Ras-related protein Rab-6B [synthetic construct]
gi|189065457|dbj|BAG35296.1| unnamed protein product [Homo sapiens]
gi|190690565|gb|ACE87057.1| RAB6B, member RAS oncogene family protein [synthetic construct]
gi|296490967|tpg|DAA33065.1| TPA: ras-related protein Rab-6B [Bos taurus]
gi|380783157|gb|AFE63454.1| ras-related protein Rab-6B [Macaca mulatta]
gi|383408451|gb|AFH27439.1| ras-related protein Rab-6B [Macaca mulatta]
gi|384943778|gb|AFI35494.1| ras-related protein Rab-6B [Macaca mulatta]
gi|410206664|gb|JAA00551.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410261278|gb|JAA18605.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410287730|gb|JAA22465.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410328335|gb|JAA33114.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|417397131|gb|JAA45599.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|443716907|gb|ELU08200.1| hypothetical protein CAPTEDRAFT_110813 [Capitella teleta]
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++D +++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEIDGEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNNE--- 124
ER SIT YY+ A A I+V+ + +F L Q L EI YA + K+F L GN
Sbjct: 67 ERFRSITQGYYRSANALIVVYDISCQPTFDCLPQWLKEIEHYA-STKVFSYLVGNKSDRA 125
Query: 125 --------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ H++ +TS K + V+ +F DI ++L
Sbjct: 126 SQREIPAYVGEDFARLHDM--EFIETSAKEADNVDSLFYDIAKEL 168
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 72 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 125
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTS 127
Query: 129 LISSTYKTS 137
+++Y T+
Sbjct: 128 ERAASYDTA 136
>gi|167382002|ref|XP_001735936.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901842|gb|EDR27829.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ RY + F + S ST+G+D +K + ++ + I++QLWDT G
Sbjct: 14 KILIIGESGVGKTAILERYCENIF--NESLLSTVGVDFKSKYFTIEGKKIKVQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
E+ +IT+SYY+ I+ + + + SF ++ L E+ +I + GN
Sbjct: 72 EKFRNITTSYYRGTHGCIITYDVTDLNSFEKITYWLHELGNEKYQPEIIILGNKIDAKDK 131
Query: 123 ---NEQCHNLIS-----STYKTSCKTGEGVEEMFADIGRQLI 156
E N + S KTGEGVEE+F +I +I
Sbjct: 132 KVTKEMVENFSRQNGGIKVFNCSAKTGEGVEEVFTEIVNSII 173
>gi|440298637|gb|ELP91268.1| GTP-binding protein YPTM1, putative [Entamoeba invadens IP1]
Length = 207
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ +R+ +TF ST+G+D K KV +++++MQLWDT G
Sbjct: 11 KILIIGESGVGKTAIMQRFCENTF--EPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK--IFLCGNN---- 123
+R +IT+SYY+ + ++V+ + + ASF +S E+ EN I L GN
Sbjct: 69 DRFRNITASYYRGTQGVLIVYDITDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLM 128
Query: 124 ----------EQCHNLIS--STYKTSCKTGEGVEEMFADIGRQLI 156
EQ + T+ S K G G++++F + + +I
Sbjct: 129 DHAAVKQEAVEQLARQLGGVQTFTCSAKDGSGIDDVFNALTQSII 173
>gi|401624481|gb|EJS42537.1| ypt6p [Saccharomyces arboricola H-6]
Length = 216
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIVVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKKIAKSL 173
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS+L R+ +TF S KST+G++ + +V+ ++I+ Q+WDT G
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTKNTF--SLDSKSTIGVEFATRTIEVEGKTIKAQIWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ +A+ N I L GN +
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKMDLKH 137
Query: 129 LIS 131
L S
Sbjct: 138 LRS 140
>gi|296203114|ref|XP_002748752.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Callithrix
jacchus]
Length = 216
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKLVTVDGMRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN--NEQ 125
ER S+T +YY+ A+A +L++ + N ASF + L EI YA+ + I L GN +
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
Query: 126 CHNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
+I S +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER ++TSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L G
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 21 KVVLVGDSGVGKSNLLSRFTRNAF--SLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNN 123
ER +ITS+YY+ A A+LV+ + A +F ++ L E+ +A+ A + L GN
Sbjct: 79 ERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNK 134
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +IT+SYY+ A I+V+ + + +F + Q L EI +A E L GN N
Sbjct: 69 ERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRFASEGVNKLLVGNKSDLTN 128
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
Y +TS K VE+ F + +Q+ + R+ + AGG
Sbjct: 129 KKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQI----KDRMGSTSTPAGGA 184
Query: 174 GTDSFKLG 181
K+G
Sbjct: 185 SKGGVKVG 192
>gi|334327772|ref|XP_001377113.2| PREDICTED: ras-related protein Rab-30-like [Monodelphis domestica]
gi|395521092|ref|XP_003764654.1| PREDICTED: ras-related protein Rab-30 [Sarcophilus harrisii]
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|260784881|ref|XP_002587492.1| hypothetical protein BRAFLDRAFT_237030 [Branchiostoma floridae]
gi|229272640|gb|EEN43503.1| hypothetical protein BRAFLDRAFT_237030 [Branchiostoma floridae]
Length = 104
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 3 SIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
++K P K++L GE GVGK+SLF R DTF+ + K+++G+D KV+ +++
Sbjct: 2 AVKRPTFKLVLLGEVGVGKTSLFVRLKDDTFLEDT--KASIGVDFCETLVKVEGEEVRLC 59
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLS 102
+WDT G+ER ++T YY+ A+AA+LV+SL ++AS +L+
Sbjct: 60 IWDTAGVERFRTMTQGYYRHADAALLVYSLADSASLRLLT 99
>gi|72136116|ref|XP_795833.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
gi|115689778|ref|XP_001199469.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTIEIGGEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY A+A +LVF + + SF+ L L E+ YA I L GN
Sbjct: 67 ERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREVEQYASPKVISVLVGNKIDLGK 126
Query: 123 ----NEQCHNLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
NE+ + ++ +TS K + V+ +F DI +L
Sbjct: 127 DREVNEEDGQSFADSHSMRFLETSAKESDNVDRLFLDIAVEL 168
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 27/194 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTLELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGN----- 122
ER +ITSSYY+ A I+V+ + + SF+ + Q + EI YA N K+ L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYA-NDKVNKMLVGNKSDLA 126
Query: 123 ----------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
E +L +TS K VE+ F + ++ + + AG
Sbjct: 127 SKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEI------KARMAQAPAGK 180
Query: 173 IGTDSFKLGGRGSE 186
G+ S ++ G+GSE
Sbjct: 181 EGSASIQV-GKGSE 193
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTMARQI 169
>gi|145540750|ref|XP_001456064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833749|emb|CAI39344.1| rab_B20 [Paramecium tetraurelia]
gi|124423874|emb|CAK88667.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKSSL R+A D F S S +T+G+D + +D +++++Q+WDT G
Sbjct: 10 KLVIIGNSGVGKSSLLLRFADDQF--SESYLTTIGVDFRFRTLPIDGKNVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLL-EIVTYAE-NAKIFLCGNN---- 123
ER +ITS+YYK A+ ++V+ + SF + + L E+ +Y E N ++ + GN
Sbjct: 68 ERFRTITSAYYKGADGIVMVYDVTQGQSFDDIDKFWLHEVESYGEKNVQLLIIGNKNDLD 127
Query: 124 -----------EQC--HNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
E C HN++ + S KT + V F ++ R+L+
Sbjct: 128 EQKQVETSKAEEYCKSHNML--FMECSAKTADHVNNAFLELSRKLM 171
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELEAKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +VF + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVFDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDIAD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQI 169
>gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus]
Length = 214
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 18/156 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKTDLSD 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFA 149
+ L +TS K G V+++F
Sbjct: 131 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFP 166
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDAKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|21361418|ref|NP_055303.2| ras-related protein Rab-30 [Homo sapiens]
gi|31560778|ref|NP_083770.2| ras-related protein Rab-30 [Mus musculus]
gi|115495465|ref|NP_001069697.1| ras-related protein Rab-30 [Bos taurus]
gi|386780907|ref|NP_001248052.1| ras-related protein Rab-30 [Macaca mulatta]
gi|57102328|ref|XP_533993.1| PREDICTED: ras-related protein Rab-30 [Canis lupus familiaris]
gi|114639563|ref|XP_001175176.1| PREDICTED: ras-related protein Rab-30 isoform 7 [Pan troglodytes]
gi|114639565|ref|XP_001175173.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan troglodytes]
gi|114639567|ref|XP_001175175.1| PREDICTED: ras-related protein Rab-30 isoform 6 [Pan troglodytes]
gi|114639569|ref|XP_001175170.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan troglodytes]
gi|114639571|ref|XP_001175166.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan troglodytes]
gi|149719267|ref|XP_001492126.1| PREDICTED: ras-related protein Rab-30-like [Equus caballus]
gi|291384169|ref|XP_002708711.1| PREDICTED: RAB30, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296216937|ref|XP_002754790.1| PREDICTED: ras-related protein Rab-30-like isoform 1 [Callithrix
jacchus]
gi|296216939|ref|XP_002754791.1| PREDICTED: ras-related protein Rab-30-like isoform 2 [Callithrix
jacchus]
gi|296216941|ref|XP_002754792.1| PREDICTED: ras-related protein Rab-30-like isoform 3 [Callithrix
jacchus]
gi|297689849|ref|XP_002822348.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pongo abelii]
gi|297689851|ref|XP_002822349.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pongo abelii]
gi|297689853|ref|XP_002822350.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pongo abelii]
gi|301780042|ref|XP_002925436.1| PREDICTED: ras-related protein Rab-30-like [Ailuropoda melanoleuca]
gi|332211163|ref|XP_003254688.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Nomascus
leucogenys]
gi|332211165|ref|XP_003254689.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Nomascus
leucogenys]
gi|332211167|ref|XP_003254690.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Nomascus
leucogenys]
gi|332211169|ref|XP_003254691.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Nomascus
leucogenys]
gi|348565559|ref|XP_003468570.1| PREDICTED: ras-related protein Rab-30-like [Cavia porcellus]
gi|354489829|ref|XP_003507063.1| PREDICTED: ras-related protein Rab-30-like [Cricetulus griseus]
gi|395743310|ref|XP_003777901.1| PREDICTED: ras-related protein Rab-30 [Pongo abelii]
gi|395814755|ref|XP_003780907.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Otolemur
garnettii]
gi|395814757|ref|XP_003780908.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Otolemur
garnettii]
gi|397502808|ref|XP_003822035.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Pan paniscus]
gi|397502810|ref|XP_003822036.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan paniscus]
gi|397502812|ref|XP_003822037.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan paniscus]
gi|397502814|ref|XP_003822038.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pan paniscus]
gi|397502816|ref|XP_003822039.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan paniscus]
gi|402894802|ref|XP_003910534.1| PREDICTED: ras-related protein Rab-30 [Papio anubis]
gi|403287762|ref|XP_003935099.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403287764|ref|XP_003935100.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403287766|ref|XP_003935101.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410972563|ref|XP_003992728.1| PREDICTED: ras-related protein Rab-30 [Felis catus]
gi|426251519|ref|XP_004019469.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Ovis aries]
gi|426251521|ref|XP_004019470.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Ovis aries]
gi|426369956|ref|XP_004051946.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Gorilla gorilla
gorilla]
gi|426369958|ref|XP_004051947.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Gorilla gorilla
gorilla]
gi|426369960|ref|XP_004051948.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Gorilla gorilla
gorilla]
gi|426369962|ref|XP_004051949.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Gorilla gorilla
gorilla]
gi|426369964|ref|XP_004051950.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Gorilla gorilla
gorilla]
gi|441645341|ref|XP_004090651.1| PREDICTED: ras-related protein Rab-30 [Nomascus leucogenys]
gi|38258937|sp|Q15771.2|RAB30_HUMAN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|15277920|gb|AAK94019.1|AF399756_1 RAB30 [Mus musculus]
gi|20379088|gb|AAM21104.1|AF498956_1 small GTP binding protein RAB30 [Homo sapiens]
gi|15559714|gb|AAH14213.1| RAB30, member RAS oncogene family [Homo sapiens]
gi|17028460|gb|AAH17550.1| RAB30, member RAS oncogene family [Mus musculus]
gi|49457208|emb|CAG46903.1| RAB30 [Homo sapiens]
gi|60814713|gb|AAX36314.1| RAB30 member RAS oncogene family [synthetic construct]
gi|74209184|dbj|BAE24976.1| unnamed protein product [Mus musculus]
gi|109659234|gb|AAI18449.1| RAB30, member RAS oncogene family [Bos taurus]
gi|112293021|dbj|BAF02888.1| Rab30 [Mus musculus]
gi|119595484|gb|EAW75078.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595485|gb|EAW75079.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595486|gb|EAW75080.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595487|gb|EAW75081.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123984423|gb|ABM83557.1| RAB30, member RAS oncogene family [synthetic construct]
gi|123998391|gb|ABM86797.1| RAB30, member RAS oncogene family [synthetic construct]
gi|148674775|gb|EDL06722.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148674776|gb|EDL06723.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068963|gb|EDM18515.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149068964|gb|EDM18516.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|157928438|gb|ABW03515.1| RAB30, member RAS oncogene family [synthetic construct]
gi|158256188|dbj|BAF84065.1| unnamed protein product [Homo sapiens]
gi|189065406|dbj|BAG35245.1| unnamed protein product [Homo sapiens]
gi|261860434|dbj|BAI46739.1| RAB30, member RAS oncogene family [synthetic construct]
gi|281339635|gb|EFB15219.1| hypothetical protein PANDA_014945 [Ailuropoda melanoleuca]
gi|296471922|tpg|DAA14037.1| TPA: RAB30, member RAS oncogene family [Bos taurus]
gi|335773338|gb|AEH58359.1| Ras-related protein Rab-30-like protein [Equus caballus]
gi|351696042|gb|EHA98960.1| Ras-related protein Rab-30 [Heterocephalus glaber]
gi|355566910|gb|EHH23289.1| hypothetical protein EGK_06727 [Macaca mulatta]
gi|355752502|gb|EHH56622.1| hypothetical protein EGM_06073 [Macaca fascicularis]
gi|380811820|gb|AFE77785.1| ras-related protein Rab-30 [Macaca mulatta]
gi|384946490|gb|AFI36850.1| ras-related protein Rab-30 [Macaca mulatta]
gi|410206854|gb|JAA00646.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410254834|gb|JAA15384.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410290492|gb|JAA23846.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410329963|gb|JAA33928.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|417397027|gb|JAA45547.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431838480|gb|ELK00412.1| Ras-related protein Rab-30 [Pteropus alecto]
gi|440906949|gb|ELR57158.1| Ras-related protein Rab-30 [Bos grunniens mutus]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>gi|344240431|gb|EGV96534.1| Ras-related protein Rab-30 [Cricetulus griseus]
Length = 201
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 9 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 67 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 126
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 127 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 173
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS + R++ D+F ++S +T+G+D + ++D R +++Q+WDT G
Sbjct: 18 KLLLIGDSGVGKSCVLLRFSDDSF--TTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN---EQ 125
ER +IT++YY+ A ILV+ + + +SF+ + + I A EN L GN ++
Sbjct: 76 ERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVGNKADMDE 135
Query: 126 CHNLISST-------------YKTSCKTGEGVEEMF----ADIGRQLILSNRSRLEL 165
+++ ++TS KTG+ VEE F DI R+L S +R E+
Sbjct: 136 SKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARPEV 192
>gi|156403714|ref|XP_001640053.1| predicted protein [Nematostella vectensis]
gi|156227185|gb|EDO47990.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F+S S ST+G+D NK +VD +++Q+WDT G
Sbjct: 24 KVMLLGDSGVGKTCLLVRFKDGAFLSGSF-ISTVGIDYKNKVVEVDGSKVKLQIWDTAGQ 82
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQC-- 126
ER SIT +YY+ + A +L++ + N ASF + L EI YA ++ I L N
Sbjct: 83 ERFRSITHAYYRDSHALLLLYDVTNHASFENIRAWLAEIYEYARQDVIIMLLANKADLTK 142
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ + +TS KTG V+ F I R +
Sbjct: 143 QRVVSRDQGEKLAKDHNV--AFMETSAKTGLNVDLAFMAIARDI 184
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|440913509|gb|ELR62958.1| Ras-related protein Rab-26, partial [Bos grunniens mutus]
Length = 223
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
P +V+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT
Sbjct: 29 PVPQVMLVGDSGVGKTCLLMRFKDGAFLAGTF-ISTVGIDFRNKVVDVDGMKVKLQIWDT 87
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN-- 123
G ER S+T +YY+ A A +L++ + N ASF + L EI +A++ + L GN
Sbjct: 88 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVD 147
Query: 124 ---------EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQL 155
E L +TS KTG V+ F I ++L
Sbjct: 148 SAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 192
>gi|430811133|emb|CCJ31387.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ +SY + + AI+V+ + N SF ++ + +I + I + GN +N
Sbjct: 70 ERFRSLIASYIRDSSVAIVVYDITNRTSFINTNRWIDDIKAERGNDVIIVIVGNKTDLNN 129
Query: 129 ---------------LISSTYKTSCKTGEGVEEMFADI 151
L + +TS KTG V+ +F +I
Sbjct: 130 KRQVTTEEGEKMAKELKTMFMETSAKTGHNVKALFKEI 167
>gi|390342568|ref|XP_003725687.1| PREDICTED: uncharacterized protein LOC762666 [Strongylocentrotus
purpuratus]
Length = 633
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 9 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTIEIGGEKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY A+A +LVF + + SF+ L L E+ YA I L GN
Sbjct: 67 ERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREVEQYASPKVISVLVGNKIDLGK 126
Query: 123 ----NEQCHNLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
NE+ + ++ +TS K + V+ +F DI +L
Sbjct: 127 DREVNEEDGQSFADSHSMRFLETSAKESDNVDRLFLDIAVEL 168
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 23/166 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + V+ + I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N +I L GN +
Sbjct: 73 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGNKTDLRH 132
Query: 129 LIS---------------STYKTSCKTGEGVEEMFADIGRQLILSN 159
L + S +TS VEE F QLIL +
Sbjct: 133 LRAVATDDARSFAEAEGLSYIETSALEATNVEEAF-----QLILGD 173
>gi|432853316|ref|XP_004067647.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF ++ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 174
>gi|73959514|ref|XP_853648.1| PREDICTED: ras-related protein Rab-26 [Canis lupus familiaris]
Length = 244
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 53 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQIWDTAGQ 111
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN------ 122
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ N + L GN
Sbjct: 112 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQHNVVLMLLGNKVDSAQ 171
Query: 123 ----NEQCHNLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ ++ Y +TS KTG V+ F I ++L
Sbjct: 172 ERVVKRKDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 213
>gi|57097619|ref|XP_539883.1| PREDICTED: ras-related protein Rab-19 [Canis lupus familiaris]
Length = 217
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TETQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K + V+E+F + R+LI N L
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMARELIARNSLHL 187
>gi|365759371|gb|EHN01162.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842296|gb|EJT44532.1| YPT6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 216
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKRIAKSL 173
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKMIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEINRYASENVNKLLVGNKCDLTT 127
Query: 129 LISSTYK---------------TSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+Y+ TS K VEE F + ++ S+ L T +G +
Sbjct: 128 RRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNTGKSGTV 187
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 22/170 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + + +T+G+D K +++ ++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDTHIATIGVDFKIKTVQINGLNVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER +ITSSYY+ A+ I+V+S+ + +F + Q L EI YA + I L GN
Sbjct: 68 ERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASESVIKLLIGNKCDLED 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMF----ADIGRQLILSN 159
E ++L S ++S K V+E+F DI + L SN
Sbjct: 128 ERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMKNLQTSN 177
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|311251816|ref|XP_003124780.1| PREDICTED: ras-related protein Rab-26-like [Sus scrofa]
gi|350581927|ref|XP_003481158.1| PREDICTED: ras-related protein Rab-26-like [Sus scrofa]
Length = 256
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKILDVDGMKVKLQIWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN----- 123
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEYAQRDVVLLLLGNKVDSAQ 183
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ + +TS +TG V+ F + ++L
Sbjct: 184 ERVVRREDGEQLAKEFGLPFMETSARTGLNVDLAFTAVAKEL 225
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKSSL R+A DT+ + ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTY--TPDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA + L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKADLSD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS + VE+ F + RQ+
Sbjct: 128 KKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|195438709|ref|XP_002067275.1| GK16335 [Drosophila willistoni]
gi|194163360|gb|EDW78261.1| GK16335 [Drosophila willistoni]
Length = 200
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF S S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T Y+TS K VE+MF I RQ++
Sbjct: 128 KVVITEDAQRFARQMDIELYETSAKDNINVEDMFLSITRQVL 169
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLMIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|348579502|ref|XP_003475518.1| PREDICTED: ras-related protein Rab-19-like [Cavia porcellus]
Length = 217
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + + ++++T+G+D + +D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFRSGVY--TETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + E+ Y A N I L GN +
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEVEKYGAANLVIMLIGNKSDLWQ 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
Q H L + + +TS K ++E+F + ++L+ NR +L+
Sbjct: 137 QRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELMARNRLQLD 188
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + +F+ + Q L EI YA E+ L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYACESVNKLLVGN 121
>gi|241616943|ref|XP_002408087.1| RAS family protein, putative [Ixodes scapularis]
gi|215502924|gb|EEC12418.1| RAS family protein, putative [Ixodes scapularis]
Length = 230
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L RR+ F + +T+G+D K +VD +++Q+WDT G
Sbjct: 30 KVVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFLIKTVEVDGEKVKLQIWDTAGQ 87
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN----- 122
ER SIT SYY+ A A ILV+ + +F L L EI YA + K+ L GN
Sbjct: 88 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEQYA-SPKVLRALVGNKIDRE 146
Query: 123 NEQCHNLISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ + I + +TS K + V+++F +I +L R+ + G
Sbjct: 147 DREIPQHIGEEFARRNDMYFVETSAKEADNVDKLFTEIAVRLTAEARA-THARYSGRPSA 205
Query: 174 GTDSFK 179
TDS
Sbjct: 206 ATDSLP 211
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 132
Query: 129 LISSTYKTS 137
Y T+
Sbjct: 133 KKVVDYTTA 141
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 22/190 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN-EQCH 127
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAE 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
N + S +TS K VE+ F + ++ ++R+ Q +G
Sbjct: 128 NRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI----KNRMASQPAASGAS 183
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 184 RPATVQMRGQ 193
>gi|225714626|gb|ACO13159.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
gi|290561885|gb|ADD38340.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 213
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN 122
ER S+ SY + + A++V+ NA SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVIIMLVGN 126
>gi|123406672|ref|XP_001302832.1| Ras family protein [Trichomonas vaginalis G3]
gi|121884159|gb|EAX89902.1| Ras family protein [Trichomonas vaginalis G3]
Length = 207
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 21/166 (12%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
+K++ G GK+++ R+ YDTF +S+ ST+G +K+ VD I++ +WDT G
Sbjct: 12 EKIVFLGAQSTGKTAIVTRFQYDTFTPNSN--STIGAAFVSKDLNVDGTVIKLDIWDTAG 69
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCH- 127
E+ S+T YY+ A AAI+V + + + + E+ + ++ + +C N +C
Sbjct: 70 SEKYKSLTPMYYRDARAAIIVLDVTRPETIQAAGEWISELREHGKSDCMLICAAN-KCDL 128
Query: 128 -----------------NLISSTYKTSCKTGEGVEEMFADIGRQLI 156
N IS+ +TS GEG++E+F +IG+ L+
Sbjct: 129 TGERKVTSQEVQDFVFANQISAYKETSALNGEGIKELFNEIGKLLL 174
>gi|401828567|ref|XP_003887997.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392999005|gb|AFM99016.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 203
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 1 MASIKVPEQ-KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSI 59
MA+ ++ + K+I+ GE VGK+ L +Y D F S +T+G+D +K ++ +++
Sbjct: 1 MATPRIDYRYKIIVLGESDVGKTCLLHKYKEDDF--KQSLMTTIGVDTVSKNIVLNGKNV 58
Query: 60 QMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL 119
+ +WDT G ER SIT SYY+ A+ +L+F + + +F + + I N +FL
Sbjct: 59 MLNIWDTAGQERFFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFL 118
Query: 120 CGNNE-----------------QCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
GN + + + Y TS KTGE V +F D+ L+
Sbjct: 119 VGNKRDKVDSTTYYEMESRFKSKADEMKAQYYTTSAKTGENVNNIFEDMAMILL 172
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF + Q + EI YA EN L GN +C +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGN--KC-D 124
Query: 129 LISSTYKTS 137
L+S TS
Sbjct: 125 LVSKRVVTS 133
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 65 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 122
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 123 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 176
>gi|148701156|gb|EDL33103.1| RAB1B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 189
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|383848739|ref|XP_003700005.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Megachile
rotundata]
Length = 211
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis niloticus]
Length = 203
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N + L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
E S Y +TS K + VE++F D+ +LI
Sbjct: 129 KREVLRQRAEDFAEAQSMLYLETSAKESDNVEKLFLDLACELI 171
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R+A +TF + + +T+G+D + +VD +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTF--TGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ ++V+ + N SF + + L EI + L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTM 168
+ T ++TS K VEEMF I R ++ S + + E Q +
Sbjct: 128 KVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQV 181
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R++ D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFSDDSYIES--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLEA 127
Query: 129 LISSTYKTSCKTGEGV 144
+ +Y+T+ +G+
Sbjct: 128 NRAVSYETAKAFADGI 143
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK++L R+A D F S KST+G++ K +++ ++++ Q+WDT G
Sbjct: 11 KIVLIGDSGVGKTNLLSRFARDQFNPDS--KSTIGVEFATKTLEIEGKTVKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+L++ + + +F+ LS+ L E+ A+ N + L GN
Sbjct: 69 ERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDLQE 128
Query: 129 L 129
L
Sbjct: 129 L 129
>gi|395835767|ref|XP_003790844.1| PREDICTED: ras-related protein Rab-26 [Otolemur garnettii]
Length = 256
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQIWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + + +SF + L EI YA+ NA + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTSKSSFDNIQAWLTEIQEYAQHNAVLMLLGNKVDSAH 183
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KTG V+ F I ++L
Sbjct: 184 EHVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|167376716|ref|XP_001734114.1| GTP-binding protein YPT1 [Entamoeba dispar SAW760]
gi|165904478|gb|EDR29694.1| GTP-binding protein YPT1, putative [Entamoeba dispar SAW760]
Length = 206
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L GE GVGK+++ +R TF +++G+D K K+++ I M++WD G
Sbjct: 7 KILLIGESGVGKTAMLQRLTQGTF--DGIYTASVGVDLKTKVIKINEEEITMEIWDAAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHN- 128
ER S+T SYY+ AAI+VF L + SF ++ L E+ + I L GN N
Sbjct: 65 ERFRSVTQSYYRGTHAAIIVFDLTDKTSFEMVGYWLSEMEKDNNHPIIALVGNKSDLSNA 124
Query: 129 ------LISSTYKT------SCKTGEGVEEMFADIGRQLILSNRS 161
+I +TY + S G+ +EE+F I +Q + +S
Sbjct: 125 RTVPIEVIRATYPSLRYFECSAVNGKNIEEIFVFIAQQFVQRMKS 169
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGN 121
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 18/170 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D F + S ST+G+D + K+ +++++Q+WDT G
Sbjct: 17 KLVLIGDSGVGKSCLLLRFADDAF--TESYISTIGVDFRFRTVKMGKKTVKLQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITS+YY+ A+ I+V+ ++ SF ++ L E+ YA E L GN
Sbjct: 75 ERFRTITSAYYRGADGIIMVYDTTSSDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTA 134
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
E +L + +TS KT + VEE F + +LI +++
Sbjct: 135 DRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMAGELIKQREAKI 184
>gi|237835093|ref|XP_002366844.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964508|gb|EEA99703.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 457
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ VGKS L R+A F+ ++TLG+D + V+ R +++QLWDT G
Sbjct: 205 KLLIIGDSCVGKSCLLSRFARGRFLPH---RTTLGVDFETQTLDVNGRRVKIQLWDTAGH 261
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T SYY+ A A++VF + SF + L E+ A +N + L GN N
Sbjct: 262 ERFRSVTLSYYRSAMGALVVFDITKRESFESVQSWLRELEDRAPQNVQKVLVGNKADVEN 321
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQ 166
S +TS KTG+ V F D+ Q++ R +LELQ
Sbjct: 322 RAVSREEARRLAGEHNLHYIETSAKTGQHVRTAFVDLTLQVLRCLR-QLELQ 372
>gi|300700984|ref|XP_002994928.1| hypothetical protein NCER_102415 [Nosema ceranae BRL01]
gi|239602942|gb|EEQ81257.1| hypothetical protein NCER_102415 [Nosema ceranae BRL01]
Length = 190
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 7 PEQK--VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
PE K +I+ GE VGK++L R+Y D F S ST+G+D +K+ V+ + + + +W
Sbjct: 4 PEYKFKLIIIGESNVGKTALLRKYKTDEF--HESLLSTIGIDTVSKKIFVNKKPVLLNIW 61
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNE 124
DT G ER SIT SYY+ A+ LVF L + +++ +++ + IFL GN
Sbjct: 62 DTAGQERFFSITKSYYRNADGIFLVFDLSVENTLKSVNRWYKNVISETGDVPIFLIGNKR 121
Query: 125 QC-----HNLISST-------YKTSCKTGEGVEEMFADI 151
H +I S Y TS K G V ++F ++
Sbjct: 122 DLIDDINHEIIKSKLPVNMKYYSTSAKYGLNVSKIFEEM 160
>gi|384496448|gb|EIE86939.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 206
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +L + ++N+ SF L Q E + A + L GN
Sbjct: 69 ERFQSLGVAFYRGADCCVLAYDVNNSKSFEALDQWRDEFLVQASPRDPDRFPFVLLGNKI 128
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR 153
E+ ++S ++TS K VE+ F I +
Sbjct: 129 DVEESKRMVSQKRAMAWCQSKGNVPYFETSAKEAINVEQAFQTIAK 174
>gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio]
Length = 207
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 131
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 132 KRQITIEEGEQRAKELSVMFIETSAKTGCNVKQLFRRVAAAL 173
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|351711287|gb|EHB14206.1| Ras-related protein Rab-26 [Heterocephalus glaber]
Length = 319
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 128 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGMKVKLQIWDTAGQ 186
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN----- 123
ER S+T +YY+ A A +L++ + N ASF + L EI YA++ + L GN
Sbjct: 187 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQDDVVLMLLGNKVDSAQ 246
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
E+ Y +TS KTG V+ F I ++L
Sbjct: 247 ERVVKREDGEKLAKEYGLPYMETSAKTGLNVDLAFTAIAKEL 288
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+F + S +T+G+D + K+DD+ I++Q+WDT G
Sbjct: 14 KLVLIGDSGVGKSCLLLRFADDSF--TDSYITTIGVDFRFRTVKIDDKIIKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN------ 123
ER +ITS+YY+ A+ +LV+ +SF + + E+ Y ++ L GN
Sbjct: 72 ERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDDWISEVDRYTTDSSKILVGNKCDLVAQ 131
Query: 124 ---EQCHNLISST------YKTSCKTGEGVEEMFADIGRQLI 156
EQ S+ + S K VE+ F I ++L+
Sbjct: 132 RAIEQSQGEKKSSELGIDFIEASAKNSTNVEDCFIRIAKRLL 173
>gi|74834519|emb|CAI44571.1| rab_A23 [Paramecium tetraurelia]
Length = 206
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E KV+L G+ GVGKSS+ R+ D F + +STLG + +V+ + + Q+WDT
Sbjct: 4 EVKVVLLGDSGVGKSSIVLRFCSDIF--KVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GMERVASITSSYYK-FAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN--- 122
G E+ S+T YY+ FA+ A++V+ + + SF VL + E+ + I L GN
Sbjct: 62 GQEKYKSLTPLYYRGFAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKND 121
Query: 123 ------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
N + +S TSCK +G++E+F I Q++ +++L
Sbjct: 122 LIEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKL 174
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ G GKSSL R+ D F+ ++ST+G F++ V+D +++ ++WDT G
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+ YY+ A AAI+VF + N ASF + + E+ N + L GN +
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129
Query: 129 LI------SSTY---------KTSCKTGEGVEEMFADIGRQL 155
+ TY +TS KT V+E+F +I R+L
Sbjct: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 132
Query: 129 LISSTYKTS 137
Y T+
Sbjct: 133 KKVVDYTTA 141
>gi|327269229|ref|XP_003219397.1| PREDICTED: ras-related protein Rab-30-like [Anolis carolinensis]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAD 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 KREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|57526504|ref|NP_001002750.1| ras-related protein Rab-30 [Danio rerio]
gi|49901476|gb|AAH76437.1| RAB30, member RAS oncogene family [Danio rerio]
Length = 201
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 9 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N + L GN
Sbjct: 67 ERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAD 126
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
E+ + S Y +TS K + VE++F D+ +LI
Sbjct: 127 KREVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACELI 169
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER ++TSSYY+ A I+V+ + + SF + Q L EI YA +N L GN
Sbjct: 68 ERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+V+ + SF+ + L EI YA EN L GN + Q
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLEEIERYACENVNKLLVGNKCDLQT 132
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
++ +T +TS K VE+ F + ++
Sbjct: 133 KKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEI 174
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464144|pdb|1T91|B Chain B, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464145|pdb|1T91|C Chain C, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464146|pdb|1T91|D Chain D, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464282|pdb|1YHN|A Chain A, Structure Basis Of Rilp Recruitment By Rab7
Length = 207
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGL 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMG 169
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVELYNEF 186
Query: 170 AGGIGTD 176
I D
Sbjct: 187 PEPIKLD 193
>gi|326914544|ref|XP_003203585.1| PREDICTED: ras-related protein Rab-30-like [Meleagris gallopavo]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAD 128
Query: 123 ----NEQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLILSNR 160
++Q S +TS K + VE++F D+ +LI R
Sbjct: 129 KREVSQQRAAEFSEAQDMYYLETSAKESDNVEKLFLDLACRLIREAR 175
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + + ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TENYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|395837388|ref|XP_003791617.1| PREDICTED: ras-related protein Rab-19 [Otolemur garnettii]
Length = 217
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 22/186 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TETQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRLSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA-G 171
+ H L + +TS K + ++E+F + R+LI R+ L L + G G
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESKNIDEVFVLMARELI--ARNSLHLFSEGTLG 194
Query: 172 GIGTDS 177
+ DS
Sbjct: 195 SLPLDS 200
>gi|313241573|emb|CBY33817.1| unnamed protein product [Oikopleura dioica]
Length = 180
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YD+F ++T+G+D +K ++DD ++++QLWDT G
Sbjct: 14 KLVFLGEQGVGKTSLITRFMYDSF--DQHYQATIGIDFLSKTLQIDDNTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNNEQC-- 126
ER S+ SY + + I+V+++ SF + + ++ E+ IFL GN
Sbjct: 72 ERFRSLIPSYIRDSNVGIIVYNVTEEKSFSKIDTWIKDVKDQRGEDVIIFLVGNKTDLEA 131
Query: 127 ---------------HNLISSTYKTSCKTGEGVEEMFADIGRQL 155
HN+ +TS K+G V +F I R +
Sbjct: 132 KRKVDISVAEKKAAEHNV--HFIETSAKSGYNVNALFQRIARAI 173
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 22/165 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGKSSL R+ DTF + + +T+G+D K +D ++++ +WDT G
Sbjct: 10 KILITGESGVGKSSLLLRFTDDTF--DNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNN---- 123
ER ++T SYY+ A+ AILV+ + + SF L E+ TYA N I L GN
Sbjct: 68 ERFRTLTPSYYRNAQGAILVYDVCSRQSFSRLDAWFDELETYATNTNIVKMLIGNKIDKE 127
Query: 124 ------------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ H+++ + S KT +GV+ F ++ +++I
Sbjct: 128 RREVSREEGLKFAKKHSML--FIEASAKTKDGVQMAFEELVQKII 170
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ G GKSSL R+ D F+ ++ST+G F++ V+D +++ ++WDT G
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+ YY+ A AAI+VF + N ASF + + E+ N + L GN +
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129
Query: 129 LI------SSTY---------KTSCKTGEGVEEMFADIGRQL 155
+ TY +TS KT V+E+F +I R+L
Sbjct: 130 ARKVTAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|124506197|ref|XP_001351696.1| PfRab1a [Plasmodium falciparum 3D7]
gi|6525224|gb|AAF15358.1|AF201953_1 Rab1 protein [Plasmodium falciparum]
gi|23504624|emb|CAD51503.1| PfRab1a [Plasmodium falciparum 3D7]
Length = 207
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 29/185 (15%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ GVGKS + R++ D F + S +T+G+D + KVDD+ +++Q+WDT G
Sbjct: 14 KIILIGDSGVGKSCILLRFSDDHF--TESYITTIGVDFRFRTIKVDDKIVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+++ + SF ++ + EI Y E+ L GN C +
Sbjct: 72 ERFRTITSAYYRGADGIIIIYDTTDRNSFLHINDWMNEINKYTNEDTCKLLVGNKADCKD 131
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLIL-----------SNRSR 162
I T +TS K VE F I ++LI +N ++
Sbjct: 132 DIEITTMEGQNKAKELNISFIETSAKDATNVELAFTMITQELIKKKKKKNFTSLKNNHAK 191
Query: 163 LELQT 167
L+L T
Sbjct: 192 LKLST 196
>gi|403223777|dbj|BAM41907.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 210
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+F + S +T+G+D + V+++ I++Q+WDT G
Sbjct: 14 KLVLIGDSGVGKSCLLLRFADDSF--TDSYITTIGVDFRFRTVIVNNKRIKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +ITS+YY+ A+ I+V+ + + ASF ++ L E+ YA E+ L GN
Sbjct: 72 ERFRTITSTYYRGADGIIMVYDVTDKASFEHINDWLNEVNKYASEDTCKLLLGNKCDIED 131
Query: 124 ---------EQCHNLIS-STYKTSCKTGEGVEEMFADIGRQLI 156
E+ +I + S KTG +++ F I +L+
Sbjct: 132 NRDVASTDVERLSEVIEVPAMEVSAKTGHNIDKAFLSITEKLV 174
>gi|343427853|emb|CBQ71379.1| probable YPT6-GTP-binding protein of the rab family [Sporisorium
reilianum SRZ2]
Length = 218
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 20 KLVFLGEQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N ASF S+ + ++ + I L GN +
Sbjct: 78 ERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSD 137
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K G V+ +F I + L
Sbjct: 138 KRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQAL 179
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A++ + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGNKSDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|348669592|gb|EGZ09414.1| hypothetical protein PHYSODRAFT_254677 [Phytophthora sojae]
Length = 202
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ GVGK+S+ R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 8 KLVFLGDQGVGKTSMITRFMYDTF--DNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN 122
ER S+ SY + + A++V+ + N ASF S+ + ++ T ++ I L GN
Sbjct: 66 ERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGN 119
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 116
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ +TF S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 20 KVVLIGDSGVGKSNLLSRFTKNTFALDS--KSTIGVEFATRTIQVDTKTIKAQIWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F + + L E+ +A+ N + L GN +
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKIDLRH 137
Query: 129 LIS 131
L S
Sbjct: 138 LRS 140
>gi|113676266|ref|NP_001038931.1| ras-related protein Rab-9A [Danio rerio]
gi|339715149|ref|NP_001229903.1| ras-related protein Rab-9A [Danio rerio]
gi|112419160|gb|AAI22265.1| Zgc:153391 [Danio rerio]
gi|182889508|gb|AAI65268.1| Zgc:153391 protein [Danio rerio]
Length = 201
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F + T+G++ NK+ +VD R++ +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKF--DAHLFHTIGVEFLNKDLEVDGRTVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ ++ +L FS+D++ SFH L E + YA+
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYAD 110
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDD-RSIQMQLWDTGG 68
K++L G+ GVGKSSL RY D F S S +T+G+D K V D I++ +WDT G
Sbjct: 13 KLLLIGDSGVGKSSLLMRYTNDCFESQLS--ATIGVDFKVKLVTVPDGTKIKLSIWDTAG 70
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNN-EQ 125
ER ++T + Y+ + AA+ V+ + N SF L + E+ TY++N + L GN +
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVYDVANRESFDNLKIWMEELKTYSDNPNMIKLLVGNKIDS 130
Query: 126 CHNLIS-------------STYKTSCKTGEGVEEMFADI 151
LIS +TS KT EGV ++F+DI
Sbjct: 131 VPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDI 169
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGKSSL R++ + ++ +T+G+D + +V + +++ +WDT G
Sbjct: 18 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A+ ILV+ + N +F L + E+ TY +E+ L GN E
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVANRETFEALPRWYSELETYVSESVVKILVGNKEYSRQ 137
Query: 129 LISST------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAG 171
+ ++ + S KT GV+E+F ++ + IL + ++ G G
Sbjct: 138 VPTAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVER-ILDTPELWDPKSKGQG 191
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQWLSEIDRYASDNVNKLLVGN 121
>gi|156717362|ref|NP_001096221.1| uncharacterized protein LOC100124772 [Xenopus (Silurana)
tropicalis]
gi|111309029|gb|AAI21384.1| LOC100124772 protein [Xenopus (Silurana) tropicalis]
Length = 210
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 17 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 75 ERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 134
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 135 KRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 176
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R++ DT+ S S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFSDDTY--SESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E+ L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVGN 121
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|4585808|emb|CAB40900.1| putative Rab1A protein [Plasmodium falciparum]
Length = 207
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 29/185 (15%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ GVGKS + R++ D F + S +T+G+D + KVDD+ +++Q+WDT G
Sbjct: 14 KIILIGDSGVGKSCILLRFSDDHF--TESYITTIGVDFRFRTIKVDDKIVKLQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A+ I+++ + SF ++ + EI Y E+ L GN C +
Sbjct: 72 ERFRTITSAYYRGADGIIIIYDTTDRNSFLHINDWMNEINKYTNEDTCKLLVGNKADCKD 131
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLIL-----------SNRSR 162
I T +TS K VE F I ++LI +N ++
Sbjct: 132 DIEITTMEGQNKAKELNISFIETSAKDATNVELAFTMITQELIKKKKKKNFTSLKNNHAK 191
Query: 163 LELQT 167
L+L T
Sbjct: 192 LKLST 196
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + V+ + I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N +I L GN +
Sbjct: 73 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGNKTDLRH 132
Query: 129 L 129
L
Sbjct: 133 L 133
>gi|194390946|dbj|BAG60591.1| unnamed protein product [Homo sapiens]
Length = 193
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN ++
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENRQVATKRAQA 127
Query: 125 QCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
C++ + Y +TS K VE+ F I R L + +EL
Sbjct: 128 WCYSKNNIPYFETSAKEAINVEQAFQAIARN-ALKQETEVEL 168
>gi|432889723|ref|XP_004075330.1| PREDICTED: ras-related protein Rab-30-like [Oryzias latipes]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K ++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N + L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLVE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
E S Y +TS K + VE++F D+ +LI
Sbjct: 129 KREVLRQRAEDFAEAQSMLYLETSAKESDNVEKLFLDLACELI 171
>gi|387018010|gb|AFJ51123.1| ras-related protein Rab-6A-like [Crotalus adamanteus]
Length = 212
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 19 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 77 ERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 136
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 137 KRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 178
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|410915366|ref|XP_003971158.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Takifugu
rubripes]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS K G V+++F + L
Sbjct: 133 KRQITTEEGEQRAKEMSVLFIETSAKAGYNVKQLFRRVAAAL 174
>gi|348541313|ref|XP_003458131.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S T+G++ NKE +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKF--DSHLFHTIGVEFLNKELEVDGRRVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ ++ +L FSLD+ SF L+ E YA+
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSLDDGQSFQNLANWKKEFTYYAD 110
>gi|118089366|ref|XP_001232252.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Gallus gallus]
gi|118089368|ref|XP_001232274.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Gallus gallus]
gi|118089370|ref|XP_420182.2| PREDICTED: ras-related protein Rab-9B isoform 3 [Gallus gallus]
Length = 201
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E V YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYAD 110
>gi|239915976|ref|NP_001008749.2| ras-related protein Rab-19 [Homo sapiens]
gi|114616316|ref|XP_001153248.1| PREDICTED: ras-related protein Rab-19 isoform 1 [Pan troglodytes]
gi|397484561|ref|XP_003813442.1| PREDICTED: ras-related protein Rab-19 [Pan paniscus]
gi|426358117|ref|XP_004046368.1| PREDICTED: ras-related protein Rab-19 [Gorilla gorilla gorilla]
gi|158513667|sp|A4D1S5.2|RAB19_HUMAN RecName: Full=Ras-related protein Rab-19
gi|187954847|gb|AAI40797.1| RAB19 protein [Homo sapiens]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + +D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K + +EE+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHL 187
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|449266697|gb|EMC77718.1| Ras-related protein Rab-9A [Columba livia]
Length = 201
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 23/179 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F + T+G++ NKE +VD + MQ+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKF--DAQLFHTIGVEFLNKELEVDGHFVTMQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGN-- 122
ER S+ + +Y+ ++ +L FS+D++ SF LS E + YA E+ + GN
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKV 126
Query: 123 ------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILS-NRSRLELQT 167
+ C N + Y +TS K V F + R+++ S +RS +QT
Sbjct: 127 DIDERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSDHFIQT 185
>gi|388857378|emb|CCF49052.1| probable YPT6-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 218
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 20 KLVFLGEQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 77
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N ASF S+ + ++ + I L GN +
Sbjct: 78 ERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSD 137
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K G V+ +F I + L
Sbjct: 138 KRQVTTDEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQAL 179
>gi|119604354|gb|EAW83948.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + +D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWE 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + + +TS K + +EE+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKHGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHL 187
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRIVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + + SF L E + A +N
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N S ++TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDLENRAVSAKRAQQWGQLKNNIPYFETSAKEAINVEQAFQTIAKN-ALAQE 177
Query: 161 SRLEL 165
S +EL
Sbjct: 178 SEVEL 182
>gi|17137220|ref|NP_477172.1| Rab6 [Drosophila melanogaster]
gi|125985285|ref|XP_001356406.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|194765981|ref|XP_001965103.1| GF23429 [Drosophila ananassae]
gi|194861334|ref|XP_001969761.1| GG10272 [Drosophila erecta]
gi|195035425|ref|XP_001989178.1| GH10191 [Drosophila grimshawi]
gi|195147148|ref|XP_002014542.1| GL18897 [Drosophila persimilis]
gi|195351007|ref|XP_002042028.1| GM26307 [Drosophila sechellia]
gi|195387894|ref|XP_002052627.1| GJ20647 [Drosophila virilis]
gi|195472321|ref|XP_002088449.1| GE12402 [Drosophila yakuba]
gi|2313037|dbj|BAA21707.1| rab6 [Drosophila melanogaster]
gi|7297923|gb|AAF53168.1| Rab6 [Drosophila melanogaster]
gi|16648070|gb|AAL25300.1| GH09086p [Drosophila melanogaster]
gi|54644730|gb|EAL33470.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|190617713|gb|EDV33237.1| GF23429 [Drosophila ananassae]
gi|190661628|gb|EDV58820.1| GG10272 [Drosophila erecta]
gi|193905178|gb|EDW04045.1| GH10191 [Drosophila grimshawi]
gi|194106495|gb|EDW28538.1| GL18897 [Drosophila persimilis]
gi|194123852|gb|EDW45895.1| GM26307 [Drosophila sechellia]
gi|194149084|gb|EDW64782.1| GJ20647 [Drosophila virilis]
gi|194174550|gb|EDW88161.1| GE12402 [Drosophila yakuba]
gi|220945102|gb|ACL85094.1| Rab6-PA [synthetic construct]
gi|220954838|gb|ACL89962.1| Rab6-PA [synthetic construct]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 132 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 173
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEF--SLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDLRH 131
Query: 129 LIS 131
L S
Sbjct: 132 LRS 134
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 121
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 19/166 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGK+++ ++ F S K+T+G++ NK+ +DD+ I+ QLWDT G
Sbjct: 12 KIVIIGDSGVGKTNIMTQFTRGEF--SEETKTTVGVEFANKQLVIDDKIIKAQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER +I SSYYK A A++VF + ++F + + + + + I L GN +L
Sbjct: 70 ERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKVQESTSNEISIILVGNKSDLRHL 129
Query: 130 ------ISSTY---------KTSCKTGEGVEEMFADI--GRQLILS 158
+SS Y +TS K G V E F + G+ LIL+
Sbjct: 130 RQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINGKALILN 175
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + +++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKVVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGN 124
>gi|195443010|ref|XP_002069232.1| GK21078 [Drosophila willistoni]
gi|194165317|gb|EDW80218.1| GK21078 [Drosophila willistoni]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 132 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 173
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++++++Q+WDT G
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTY--TDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF + Q + EI YA EN L GN +C +
Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGN--KC-D 125
Query: 129 LISSTYKTS 137
L+S TS
Sbjct: 126 LVSKRVVTS 134
>gi|299753222|ref|XP_001833137.2| ryh1 [Coprinopsis cinerea okayama7#130]
gi|298410200|gb|EAU88826.2| ryh1 [Coprinopsis cinerea okayama7#130]
Length = 214
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
ER S+ SY + + AI+VF + N SF ++ + ++ + N I L GN +
Sbjct: 80 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSD 139
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K G V+ +F I L
Sbjct: 140 KRQVTVEEATTKATQLNIMFMETSAKAGHNVKSLFKKIAMSL 181
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + KVD + I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLES--KSTIGVEFATRTLKVDGKVIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
L++ +TS VE+ FA++ Q+
Sbjct: 133 LLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQI 174
>gi|78042536|ref|NP_001030212.1| ras-related protein Rab-19 [Bos taurus]
gi|109892951|sp|Q3ZC27.1|RAB19_BOVIN RecName: Full=Ras-related protein Rab-19
gi|73587379|gb|AAI02962.1| RAB19, member RAS oncogene family [Bos taurus]
gi|296488160|tpg|DAA30273.1| TPA: RAB19, member RAS oncogene family [Bos taurus]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + ++ + +++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYMEA--QQNTIGVDFTVRALEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWE 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ H L + + +TS K + ++E+F + R+L+ R L L GA G
Sbjct: 137 KRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELM--ARHSLPLYGEGAPG 194
>gi|289741525|gb|ADD19510.1| Rab protein 6 [Glossina morsitans morsitans]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SFH S+ + ++ T + I L GN
Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 132 KRQVSTEEGERKAKELNVMFVETSAKAGYNVKQLFRRVAAAL 173
>gi|407035385|gb|EKE37679.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ RY + F + S ST+G+D +K + ++ + I++QLWDT G
Sbjct: 14 KILIIGESGVGKTAILERYCENIF--NESLLSTVGVDFKSKYFTIEGKRIKVQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
E+ +IT+SYY+ I+ + + + SF ++ L E+ +I + GN
Sbjct: 72 EKFRNITTSYYRGTHGCIVTYDVTDINSFDKITYWLHELGNEKYQPEIIILGNKIDARDR 131
Query: 123 ---NEQCHNLIS-----STYKTSCKTGEGVEEMFADIGRQLILSNRS 161
E N + S KTGEGVEE+F +I + I N+S
Sbjct: 132 KVTKEMAENFSRQNGGIKVFNCSAKTGEGVEEVFTEIVKS-IFKNKS 177
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSY + A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYCRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTT 127
Query: 123 -----NEQCHNLISST----YKTSCKTGEGVEEMFADIGRQL 155
N C S +TS K VE+ F + ++
Sbjct: 128 KKVVDNTTCQEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|440902734|gb|ELR53487.1| Ras-related protein Rab-19 [Bos grunniens mutus]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + ++ + +++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYMEA--QQNTIGVDFTVRALEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWE 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ H L + + +TS K + ++E+F + R+L+ R L L GA G
Sbjct: 137 KRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELM--ARHSLPLYGEGAPG 194
>gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila]
gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777802|dbj|BAJ21297.1| Rab-family small GTPase Rab6B [Tetrahymena thermophila]
Length = 227
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G+ VGK+S+ R+ YD F + S + T+G+D K ++D++++++QLWDT G
Sbjct: 13 KIVFLGDQSVGKTSIINRFIYDNF--TGSEQPTVGIDFICKTLQMDNKTLRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV-TYAENAKIFLCGN 122
ER S+ SY + + AAI+V+ + N SF +++ + E+ NA IF+ GN
Sbjct: 71 ERFKSLIPSYIRDSNAAIIVYDITNQNSFSNVTKWVEEVKEERGNNAFIFILGN 124
>gi|124005782|ref|ZP_01690621.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
gi|123988850|gb|EAY28456.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
Length = 163
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
+KVIL G +GVGK+SL RR+ + TF S +TLG+ K + + ++ M LWD G
Sbjct: 6 KKVILVGNFGVGKTSLVRRFVHQTF--SDEYLTTLGVRIDKKVVNLANITVNMILWDVAG 63
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNE---- 124
+ +SYY + I VF L +SF ++ + I + NA I + GN +
Sbjct: 64 EVSQTKVPASYYLGSHGVIYVFDLQRPSSFENITSDIDFIRSKLPNAPICVIGNKKDLLS 123
Query: 125 -------QCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
Q + ++Y TS KTGE VE MF I +Q+
Sbjct: 124 DAELSSIQQKLSVKASYFTSAKTGENVEAMFEMIAKQM 161
>gi|67477546|ref|XP_654231.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56471261|gb|EAL48844.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790058|dbj|BAD82825.1| small GTPase EhRabC5 [Entamoeba histolytica]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE GVGK+++ RY + F + S ST+G+D +K + ++ + I++QLWDT G
Sbjct: 14 KILIIGESGVGKTAILERYCENIF--NESLLSTVGVDFKSKYFTIEGKRIKVQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
E+ +IT+SYY+ I+ + + + SF ++ L E+ +I + GN
Sbjct: 72 EKFRNITTSYYRGTHGCIVTYDVTDINSFDKITYWLHELGNEKYQPEIIILGNKIDARDR 131
Query: 123 ---NEQCHNLIS-----STYKTSCKTGEGVEEMFADIGRQLILSNRS 161
E N + S KTGEGVEE+F +I + I N+S
Sbjct: 132 KVTKEMAENFSRQNGGIKVFNCSAKTGEGVEEVFTEIVKS-IFKNKS 177
>gi|426238492|ref|XP_004013187.1| PREDICTED: ras-related protein Rab-37 [Ovis aries]
Length = 216
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F+ S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFVPGSF-SATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ +++ Y +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|405963194|gb|EKC28791.1| Ras-related protein Rab-6B [Crassostrea gigas]
Length = 209
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + NA SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQITTEEGERKAKELSVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|395736544|ref|XP_002816312.2| PREDICTED: ras-related protein Rab-24 [Pongo abelii]
Length = 258
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ G+ VGK+SL RY +D F+ ++T+G K V DR++ + +WDT G
Sbjct: 9 KVVMLGKEYVGKTSLVERYVHDRFLVGP-YQNTIGAAFVAKVMSVGDRTVTLGIWDTAGS 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
ER +++ YY+ A+AAI+ + L +++SF + E+ + E +I+LCG
Sbjct: 68 ERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGTKSDLLEE 127
Query: 123 ------------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
+ N+ + ++TS KTG+ V+E+F + +
Sbjct: 128 DRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYV 173
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|312086652|ref|XP_003145161.1| RAB family member [Loa loa]
gi|307759675|gb|EFO18909.1| RAB family member [Loa loa]
Length = 209
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGK+ L R++ F S +T+G+D K KV+D I++Q+WDT G
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQS--ATIGVDFMIKTVKVNDDKIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGN 122
ER SIT SYY+ A A +LV+ + SF L + L EI YA N ++ L GN
Sbjct: 67 ERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYA-NRRVLKILVGN 120
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 19/182 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD + I+ Q+WDT G
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEF--SLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + + + L GN +
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSDLRH 136
Query: 129 LIS-------------STY--KTSCKTGEGVEEMFADIGRQLI-LSNRSRLELQTMGAGG 172
L++ S Y +TS V+ FA++ Q+ + N+ +E G+ G
Sbjct: 137 LVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDGSAG 196
Query: 173 IG 174
G
Sbjct: 197 PG 198
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA + L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATQGVNKLLVGNKSDMED 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 18/155 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTA 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMF 148
+ ++SS +TS K VE+ F
Sbjct: 128 NKVVSSETAKAFADEMGIPFMETSAKNATNVEQAF 162
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + VDD+ I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEF--SLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + ++F + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LIS-------------STY--KTSCKTGEGVEEMFADIGRQL 155
L++ S Y +TS VE FA++ Q+
Sbjct: 133 LVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQI 174
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ ++ ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TADYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA + L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKSDLTD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
S Y +TS VE+ F + RQ+
Sbjct: 128 KKSVDYNVAKEFADALDIPFLETSALNSTNVEQAFFTMARQI 169
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 18/155 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTA 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMF 148
+ ++SS +TS K VE+ F
Sbjct: 128 NKVVSSETAKAFADEMGIPFMETSAKNATNVEQAF 162
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 19/182 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD + I+ Q+WDT G
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEF--SLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + + + L GN +
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSDLRH 136
Query: 129 LIS-------------STY--KTSCKTGEGVEEMFADIGRQLI-LSNRSRLELQTMGAGG 172
L++ S Y +TS V+ FA++ Q+ + N+ +E G+ G
Sbjct: 137 LVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDGSAG 196
Query: 173 IG 174
G
Sbjct: 197 PG 198
>gi|296476035|tpg|DAA18150.1| TPA: RAB37, member RAS oncogene family-like [Bos taurus]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F+ S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFVPGSF-SATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+++ Y +TS KTG VE F I ++L
Sbjct: 142 TERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F SS K+T+G D KE VDDR + MQLWDT G
Sbjct: 7 KVIILGDSGVGKTSLMNQYVNKRF--SSQYKATIGADFLTKEVMVDDRLVTMQLWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-----AENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++++ SF L E + AEN + GN
Sbjct: 65 ERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQANPQNAENFPFVVLGNKI 124
Query: 124 ---------------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLIL 157
C S Y +TS K VE+ F I + +L
Sbjct: 125 DVEEHKRQVTQKRAMAWCQAKGSIPYFETSAKEAINVEQAFQTIAKNALL 174
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKS+L R+A D F +S KST+G++ ++ ++ + I+ Q+WDT G
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNS--KSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER ++TS+YY+ A A+LV+ + +FH + + L E+ T+++ N L GN +
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
Query: 129 L 129
L
Sbjct: 134 L 134
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGN----- 122
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLA 126
Query: 123 -------NEQCH-------NLISSTYKTSCKTGEGVEEMFADIGRQL 155
+E H N I + S KT VE+ F I + L
Sbjct: 127 ESRVVSADEAKHVAEQNNMNYIEA----SAKTDSNVEKAFTTIAKAL 169
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ K ++D R+I+ Q+WDT G
Sbjct: 18 KVVLTGDSGVGKSNLLSRFTRNEFNLES--KSTIGVEFATKSVEIDGRTIKAQIWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN 122
ER +IT++YY+ A A+LV+ + +F+ L LLE+ +AE + I L GN
Sbjct: 76 ERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
>gi|300794443|ref|NP_001180153.1| ras-related protein Rab-37 [Bos taurus]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F+ S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFVPGSF-SATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 128 N----------LISSTY-----KTSCKTGEGVEEMFADIGRQL 155
+++ Y +TS KTG VE F I ++L
Sbjct: 142 TERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|224043682|ref|XP_002187756.1| PREDICTED: ras-related protein Rab-30 [Taeniopygia guttata]
gi|363729400|ref|XP_417213.3| PREDICTED: ras-related protein Rab-30 [Gallus gallus]
gi|449271458|gb|EMC81819.1| Ras-related protein Rab-30 [Columba livia]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGN------ 122
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAD 128
Query: 123 ----NEQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLILSNR 160
++Q S +TS K + VE++F D+ +LI R
Sbjct: 129 KREVSQQRAAEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>gi|409107174|pdb|4DKX|A Chain A, Crystal Structure Of The Rab 6a'(Q72l)
gi|409107175|pdb|4DKX|B Chain B, Crystal Structure Of The Rab 6a'(Q72l)
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G+
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGL 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 133 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|118404508|ref|NP_001072679.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115313754|gb|AAI24009.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|163915450|gb|AAI57274.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRLVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSSWRKEFILYAD 110
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 47 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 104
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 105 ERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGN 158
>gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum]
Length = 240
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 46 KLVFLGEQAVGKTSIITRFMYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 103
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 104 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 163
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F I +L
Sbjct: 164 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 205
>gi|391341575|ref|XP_003745104.1| PREDICTED: ras-related protein Rab-18-like [Metaseiulus
occidentalis]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ GE VGKS L R+ DTF + ST+G D+ +K V D +++ LWDT G
Sbjct: 9 KVLIIGEADVGKSCLLLRFVEDTF--DTQLTSTIGFDHKSKVITVFDNKVKLSLWDTAGS 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNNEQCH 127
ER ++T+SYY+ A+ A+LV+ + SF L L+E+ TYA + I L GN H
Sbjct: 67 ERFRTLTASYYRGAQGAVLVYDVTCRESFEKLDSWLIELETYATHKNIVKMLVGNKVDKH 126
>gi|351707182|gb|EHB10101.1| Ras-related protein Rab-9B [Heterocephalus glaber]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+DN SF L E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDNRQSFENLGNWQKEFIYYAD 110
>gi|71031448|ref|XP_765366.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352322|gb|EAN33083.1| GTP-binding protein rab6, putative [Theileria parva]
Length = 222
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M S+ K++L GE GK+S+ R+ YD +I + + +T+G+D +K V+ ++++
Sbjct: 7 MTSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYA--ATIGIDFLSKVVTVNQKTMR 64
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFL 119
+QLWDT G ER S+ SY + + +AI+V+ + N SF Q + +I + A I +
Sbjct: 65 LQLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVV 124
Query: 120 CGNNEQCHNLISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
GN + + ++ +TS K G+ V+E+F + +L+
Sbjct: 125 VGNKTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATELL 176
>gi|384485982|gb|EIE78162.1| hypothetical protein RO3G_02866 [Rhizopus delemar RA 99-880]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
+P K++L G VGKSSL R+ DTF+ +T+G+D V+D++ ++ +WD
Sbjct: 5 IPTLKLLLIGNSNVGKSSLLLRFTDDTFLPQEEVSATIGVDFKVSMMDVNDKTYKLTIWD 64
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGN 122
T G ER ++TSSYY+ A+ ILV+ + N +F L+ E+ TY + + + GN
Sbjct: 65 TAGQERFRTLTSSYYRGAQGVILVYDVSNRETFDALNNWWNEVNTYCSSPDVVKMIVGN 123
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK++L R+ D F S KST+G+D K K+D + ++ Q+WDT G
Sbjct: 13 KIVLIGDSGVGKTNLRSRFTNDEFNLES--KSTIGVDFATKNVKIDGKVVKAQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITS+YY+ A AILV+ + +F L++ L E+ YA ++ I L GN
Sbjct: 71 ERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGN 124
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVDLEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGN 121
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQASPRDPENFPFVVLGNKV 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 22/183 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
E L +TS K VE+ F + + N++R+ T A
Sbjct: 131 KKVVDYTTAKEFADQLGIPFLETSAKNATNVEQAFMTMAAE----NKNRMGPPTTEANLR 186
Query: 174 GTD 176
G D
Sbjct: 187 GGD 189
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + +++ ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVELEGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEF--SLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + + +F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 20/170 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + VD + I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLES--KSTIGVEFATRTLNVDGKVIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LIS------STY---------KTSCKTGEGVEEMFADIGRQL--ILSNRS 161
L++ TY +TS VE FA++ Q+ I+S +S
Sbjct: 133 LVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKS 182
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTMKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDLTD 127
Query: 129 LISSTYKTS 137
+Y+T+
Sbjct: 128 KKVVSYETA 136
>gi|259906587|gb|ACW84383.1| GTPase, partial [Fenneropenaeus chinensis]
Length = 155
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G E
Sbjct: 14 LVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHNL 129
R S+ SY + + A++V+ + NA SFH S+ + ++ T + I L GN
Sbjct: 72 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD---- 127
Query: 130 ISSTYKTSCKTGE 142
+S + S + GE
Sbjct: 128 LSDKRQVSTEEGE 140
>gi|229367060|gb|ACQ58510.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFVYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIEDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +T KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETGAKTGYNVKQLFRRVAAAL 174
>gi|389644110|ref|XP_003719687.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
gi|351639456|gb|EHA47320.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
Length = 209
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++T+G+D +K ++DR++++QLWDT G
Sbjct: 17 KLVFLGEQSVGKTSLITRFMYDSF--DGMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + NA SF + + ++ + I L GN ++
Sbjct: 75 ERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKTDLND 134
Query: 129 LISSTYK---------------TSCKTGEGVEEMFADIGRQL 155
T + TS K G V+ +F I R L
Sbjct: 135 KREVTTQQGEEEAKKNNLMFIETSAKVGHNVQPLFKRIARSL 176
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGN----- 122
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLV 126
Query: 123 -------NEQCH-------NLISSTYKTSCKTGEGVEEMFADIGRQL 155
+E H N I + S KT VE+ F I + L
Sbjct: 127 DSRVVLADEAKHVAEQNNMNYIEA----SAKTDSNVEKAFTTIAKAL 169
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + +++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKVVKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGN 124
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLHT 130
Query: 129 LISSTYKTS 137
Y T+
Sbjct: 131 KKVVDYTTA 139
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIDRYACDNVNKLLVGN 121
>gi|114051149|ref|NP_001039674.1| ras-related protein Rab-26 [Bos taurus]
gi|108860918|sp|Q29RR0.1|RAB26_BOVIN RecName: Full=Ras-related protein Rab-26
gi|88954231|gb|AAI14067.1| RAB26, member RAS oncogene family [Bos taurus]
gi|296473473|tpg|DAA15588.1| TPA: ras-related protein Rab-26 [Bos taurus]
Length = 256
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVVDVDGMKVKLQIWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN----- 123
ER S+T +YY+ A A +L++ + N ASF + L EI +A++ + L GN
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQ 183
Query: 124 ------EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQL 155
E L +TS KTG V+ F I ++L
Sbjct: 184 ERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIES--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 121
>gi|322698527|gb|EFY90296.1| small GTP-binding protein YPTI [Metarhizium acridum CQMa 102]
Length = 208
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 16 QLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 74 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMSD 133
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS K VE+ F + RQ+
Sbjct: 134 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 175
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD+++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQVDNKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+L + L + +F +++ L E+ +A+ N I L GN +
Sbjct: 69 ERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGNKSDLRH 128
Query: 129 L 129
L
Sbjct: 129 L 129
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER +ITSSYY+ A I+V+ + +F+ + Q L EI YA +N L GN H
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDLH 129
>gi|403222371|dbj|BAM40503.1| small GTP binding protein rab6 [Theileria orientalis strain
Shintoku]
Length = 222
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M S+ K++L GE GK+S+ R+ YD +I + + +T+G+D +K V+ R+++
Sbjct: 7 MTSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYA--ATIGIDFLSKVVTVNQRTMR 64
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFL 119
+QLWDT G ER S+ SY + + +AI+V+ + N SF + +I + A I +
Sbjct: 65 LQLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFERTRNWIKDIKDMRGDKAVIVV 124
Query: 120 CGNNEQCHNLISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
GN + + ++ +TS K G+ V+E+F + +L+
Sbjct: 125 VGNKTDLLDKRTVSFEEGESLAKEMNCFFRETSAKNGDNVQELFTLVASELL 176
>gi|328709774|ref|XP_003244066.1| PREDICTED: ras-related protein Rab-26-like isoform 2 [Acyrthosiphon
pisum]
Length = 270
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ F + + +T+G+ NK VDD +++Q+WDT G
Sbjct: 75 HKTILLGDSGVGKTSLLVKFDTGKF-QTGNFSATVGIGFTNKIISVDDSKVKLQIWDTAG 133
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN---- 123
ER S+T +YY+ A A +L++ + N SF + L EI YA + I L GN
Sbjct: 134 QERFRSVTHAYYRDAHALLLLYDVTNKVSFDNIRAWLSEIRDYANDQVVIMLIGNKADCS 193
Query: 124 -----------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLIL 157
EQ S T+ +TS K+G VE F + R+L+
Sbjct: 194 LNDRMVKREDGEQLAKEYSVTFMETSAKSGFNVEIAFMAVARELLF 239
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD+++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQVDNKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + ++ +++ L E+ +A+ N I L GN +
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGNKSDLRH 128
Query: 129 L 129
L
Sbjct: 129 L 129
>gi|327267235|ref|XP_003218408.1| PREDICTED: ras-related protein Rab-6B-like [Anolis carolinensis]
Length = 208
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVASAL 174
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ +TF S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 22 KVVLVGDSGVGKSNLLSRFTRNTF--SLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 79
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGN 122
ER ++TS+YY+ A A+LV+ + +A+F ++ L E+ +A+ + L GN
Sbjct: 80 ERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGN 134
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 18/155 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQ--C 126
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTA 130
Query: 127 HNLISST-------------YKTSCKTGEGVEEMF 148
+ ++SS +TS K VE+ F
Sbjct: 131 NKVVSSETAKAFADEMGIPFMETSAKNATNVEQAF 165
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|84994386|ref|XP_951915.1| small GTP-binding protein, Rab family [Theileria annulata strain
Ankara]
gi|65302076|emb|CAI74183.1| small GTP-binding protein, Rab family, putative [Theileria
annulata]
Length = 222
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M S+ K++L GE GK+S+ R+ YD +I + + +T+G+D +K V+ ++++
Sbjct: 7 MTSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYA--ATIGIDFLSKVVTVNQKTMR 64
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFL 119
+QLWDT G ER S+ SY + + +AI+V+ + N SF Q + +I + A I +
Sbjct: 65 LQLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVV 124
Query: 120 CGNNEQCHNLISSTY---------------KTSCKTGEGVEEMFADIGRQLI 156
GN + + ++ +TS K G+ V+E+F + +L+
Sbjct: 125 VGNKTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATELL 176
>gi|254939635|ref|NP_001157225.1| ras-related protein Rab-37 isoform 2 [Mus musculus]
gi|26337951|dbj|BAC32661.1| unnamed protein product [Mus musculus]
gi|148702511|gb|EDL34458.1| RAB37, member of RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGARVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQC- 126
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 127 -HNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
+I S +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +++ L E+ +A +N I L GN +
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDLRH 128
Query: 129 L 129
L
Sbjct: 129 L 129
>gi|449269967|gb|EMC80702.1| Ras-related protein Rab-9B [Columba livia]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIHYAD 110
>gi|145492937|ref|XP_001432465.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834490|emb|CAI44561.1| rab_A45 [Paramecium tetraurelia]
gi|124399577|emb|CAK65068.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+ +P K I+ G+ VGKSS ++Y+ F+ +SR +T+G++ K VD R ++
Sbjct: 1 MSKDSLPMFKFIVVGDQSVGKSSFVKQYSESQFVEGASR-ATIGVEFIKKLVVVDKRRVE 59
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI--VTYAENAKIF 118
+Q+WDT G E+ S+ S+Y+ A A +++S++ SF L L E+ + E KI
Sbjct: 60 LQIWDTAGQEQFRSMIKSFYRGAAAVFVLYSINQRDSFEKLQDWLTELHESAHEEIVKI- 118
Query: 119 LCGNNEQCH--------------NLISSTYKTSCKTGEGVEEMFADIGRQLIL 157
L GN N S ++TS KTGE VE+ F + + +I+
Sbjct: 119 LVGNKSDMERSVQKQEAEKFMNANNFSLFFETSAKTGENVEKAFVEAVKLVIM 171
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 20/170 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + VD + I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLES--KSTIGVEFATRTLNVDGKVIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LIS------STY---------KTSCKTGEGVEEMFADIGRQL--ILSNRS 161
L++ TY +TS VE FA++ Q+ I+S +S
Sbjct: 133 LVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKS 182
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|426361811|ref|XP_004048091.1| PREDICTED: putative Ras-related protein Rab-1C-like [Gorilla
gorilla gorilla]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D + + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDPY--TESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A ++V+ + + S+ + Q L EI YA EN L GN N
Sbjct: 68 ERFWTITSSYYRGAHGFLVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSNLTT 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMF----ADIGRQL 155
++ +T +TS K VE++F A+I +Q+
Sbjct: 128 KKVVDNTTAKEFADSLGIPFLETSAKNATNVEQVFMTMAAEITKQM 173
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 20/170 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD + ++ Q+WDT G
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEF--SLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + L E+ + + N + L GN +
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNKSDLRH 133
Query: 129 LIS-------------STY--KTSCKTGEGVEEMFADIGRQL--ILSNRS 161
L++ S Y +TS VE+ FA++ Q+ I+S R+
Sbjct: 134 LVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRA 183
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 14 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNNEQCH 127
ER S+ SY + + AI+V+ + SF + + + ++ + LC GN
Sbjct: 72 ERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGEENVILCIVGNKSDLS 131
Query: 128 N--LISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAG 171
+ +S+ +TS K G V+ +F I + L E Q
Sbjct: 132 DERQVSTEEGETKAKVLGAKIFMETSTKAGYNVKNLFKRIAKSL-------PEFQESPNT 184
Query: 172 GIGTDS 177
G+ DS
Sbjct: 185 GVKDDS 190
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKS+L R+A D F +S KST+G++ ++ ++ + I+ Q+WDT G
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNS--KSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER ++TS+YY+ A A+LV+ + +FH + + L E+ T+++ N L GN +
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
Query: 129 L 129
L
Sbjct: 134 L 134
>gi|396081134|gb|AFN82753.1| Rab GTPase [Encephalitozoon romaleae SJ-2008]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 28/190 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G GVGK+ L +RY +T+ S ++ ST+G+D K +V+ +++Q+WDT G
Sbjct: 10 KMILIGNSGVGKTCLMKRYTDETY--SFTQSSTIGVDFKIKSLEVEGEKVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +I S+YY+ A I+VF + + SF L L E+ EN +I + GN
Sbjct: 68 ERFRAIISNYYRGAHGIIMVFDMGSKESFDNLGDWLAEVRKNTNENVEIIILGNKVDDKE 127
Query: 124 ------EQCHNLI-------SSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGA 170
E+ + SS Y TS K V + F + R+LI ++ +G
Sbjct: 128 KIVVTEEEIERFLSENGIEKSSFYMTSAKDNICVNDSFEYLTRKLIDKHKR------IGF 181
Query: 171 GGIGTDSFKL 180
GG G +SFKL
Sbjct: 182 GG-GKESFKL 190
>gi|156387433|ref|XP_001634208.1| predicted protein [Nematostella vectensis]
gi|156221288|gb|EDO42145.1| predicted protein [Nematostella vectensis]
Length = 115
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKSSL R+A DTF S++ ST+G+D + VD ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTF--SNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
ER ++T++YY+ A +L++ ++ + +F LSQ L E+ YA
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYA 110
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 88 KLVFLGEQAVGKTSIITRFMYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 145
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 146 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLAD 205
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F I +L
Sbjct: 206 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKL 247
>gi|20129057|ref|NP_608373.1| Rab35, isoform A [Drosophila melanogaster]
gi|320542347|ref|NP_001188678.1| Rab35, isoform B [Drosophila melanogaster]
gi|442617060|ref|NP_001259739.1| Rab35, isoform D [Drosophila melanogaster]
gi|195345901|ref|XP_002039507.1| GM22691 [Drosophila sechellia]
gi|195567823|ref|XP_002107458.1| GD15551 [Drosophila simulans]
gi|7289283|gb|AAF45371.1| Rab35, isoform A [Drosophila melanogaster]
gi|20151577|gb|AAM11148.1| LD21953p [Drosophila melanogaster]
gi|194134733|gb|EDW56249.1| GM22691 [Drosophila sechellia]
gi|194204865|gb|EDX18441.1| GD15551 [Drosophila simulans]
gi|220944822|gb|ACL84954.1| Rab35-PA [synthetic construct]
gi|220954600|gb|ACL89843.1| Rab35-PA [synthetic construct]
gi|318069472|gb|ADV37760.1| Rab35, isoform B [Drosophila melanogaster]
gi|440216975|gb|AGB95578.1| Rab35, isoform D [Drosophila melanogaster]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF S S +T+G+D + ++ +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI + K L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T ++TS K VE MF I RQ++
Sbjct: 128 KVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVL 169
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 24/198 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R++ +F ++S +T+G+D + ++D + I++Q+WDT G
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSF--TTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN---EQ 125
ER +IT++YY+ A +LV+ + + ASF+ + + I +A +N L GN ++
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 134
Query: 126 CHNLISST-------------YKTSCKTGEGVEEMFADIGR---QLILSNRSRLELQTMG 169
+ ++ ++TS KT VEE+F I R Q + SR E QT+
Sbjct: 135 SKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEPQTIK 194
Query: 170 AGGIGTDSFKLGGRGSEE 187
D GGR +++
Sbjct: 195 IN--QPDQAASGGRPAQK 210
>gi|242010871|ref|XP_002426181.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212510232|gb|EEB13443.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 187
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 20/169 (11%)
Query: 18 GVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGMERVASITS 77
VGKSSL R+A +TF S + +T+G+D K +DD+ +++Q+WDT G ER +ITS
Sbjct: 3 SVGKSSLLVRFADNTF--SGNYITTIGVDFKIKTVTIDDKRVKLQIWDTAGQERFRTITS 60
Query: 78 SYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHNLISST--- 133
+YY+ I+V+ + N SF + + + EI E L GN N+ + T
Sbjct: 61 TYYRGTHGVIVVYDVTNGESFANVKRWIHEIENNCEVVNRILVGNKNDTPDRKVVLTEDA 120
Query: 134 -----------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAG 171
++TS K VEEMF I RQ++ R++LE + A
Sbjct: 121 KRFADQMSLQLFETSAKDNINVEEMFMSITRQVL---RTKLEAKERQAN 166
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTS 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
++S+ +TS K VEE F + ++ + + + AGG
Sbjct: 128 QKVVSTETAKAFADELGIPFLETSAKNATNVEEAF------MAMTAAIKTRMASQPAGGS 181
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 182 KPPTVQIRGQ 191
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
Length = 205
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L GE VGKSSL R+ + F +++ T+G ++ V DR+I+ ++WDT G
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNEF--QENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT--YAENAKIFLCGNNEQCH 127
ER AS+ YY+ A+AA++V+ + +SF + ++H ++ + E I L GN
Sbjct: 70 ERFASLAPMYYRNAQAAVVVYDITKPSSF-IRARHWIKELKDQSPEGIVIALVGNKLDLE 128
Query: 128 NLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSR 162
+ ++TS KTGEGV E+F IG+ + + + S+
Sbjct: 129 DERKVEASEVEEEANSQGLMFFQTSAKTGEGVLEVFEGIGKNIKIGDTSQ 178
>gi|417397129|gb|JAA45598.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 22/176 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER +S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN
Sbjct: 73 ERFSSLIPSYIRDSTAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI----LSNRSRLEL 165
+ L +TS K G V+++F + L +RSR ++
Sbjct: 133 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
>gi|340380301|ref|XP_003388661.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 128
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 4 IKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQL 63
+ V E KV L G+ GVGK+SL R+ +DTF S + +TLG +K VD+ +I+ Q+
Sbjct: 1 MSVREVKVCLLGDVGVGKTSLVGRFVHDTF--SQNITTTLGASFMSKSLTVDNSTIKFQI 58
Query: 64 WDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI 108
WDT G ER S+ YY+ A AAI+V+ + N SF VL + E+
Sbjct: 59 WDTAGQERYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDWIAEL 103
>gi|145521654|ref|XP_001446682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414160|emb|CAK79285.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ + RY + F SS ST+G+D K+ +VD++ ++MQ+WDT G
Sbjct: 17 KILLIGNSGVGKTQILLRYTENQF--KSSFLSTIGIDFKIKKIQVDEKVVKMQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNN----- 123
ER +IT +YYK A ILVF++++ +F+ + + + +I +A +N L GN
Sbjct: 75 ERYQTITQTYYKGAMGIILVFAVNDKETFNDIDKWMNQIKQHASDNIIKVLIGNKTDLPD 134
Query: 124 -----EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQL 155
EQ + ++TS K G + + F I + +
Sbjct: 135 RCISYEQALQMAQKYNIPYFETSAKEGTNINDTFQQIAKTI 175
>gi|307174062|gb|EFN64749.1| Ras-related protein Rab-24 [Camponotus floridanus]
Length = 201
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G VGK+SL +RY +D+F + ++T+G K+ +V+ S+ M +WDT G
Sbjct: 7 KIVLLGNAMVGKTSLMQRYVHDSFNGNRPYQNTIGTVFAAKQVQVNGVSLVMGIWDTAGS 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCG-------- 121
E+ ++T +YY+ A+AAI+ + + ++F + E+ + EN K++LC
Sbjct: 67 EKYDAMTRTYYRGAKAAIVCYDITKFSTFQRAKHWVRELRSIEENCKVYLCATKKDLCDE 126
Query: 122 ----NNEQCHNLI--------SSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
++ N + + + TS KTGE V+++F +I + + SN L+
Sbjct: 127 GFVSDDPDLQNTVEKYARGTQTKLFITSSKTGENVDKLFDEIVQDFV-SNPENLQ 180
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +++ ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKSDLTT 130
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + ++
Sbjct: 131 KKVVDYTTAKEFADHLNIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+ L G+ GVGKS L R+A D++I S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLPLIGDSGVGKSCLLLRFADDSYIDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTA 127
Query: 129 LISSTYKTS 137
+ +Y T+
Sbjct: 128 NRAVSYDTA 136
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + +D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + SF + Q L EI YA +N L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGN 121
>gi|149054742|gb|EDM06559.1| rCG35079, isoform CRA_a [Rattus norvegicus]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
K IL G+ GVGK+SL ++ FI S +T+G+ NK VD +++Q+WDT G
Sbjct: 23 HKTILVGDSGVGKTSLLVQFDQGKFIPGSF-SATVGIGFTNKVVTVDGARVKLQIWDTAG 81
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQC- 126
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVS 141
Query: 127 -HNLISST-------------YKTSCKTGEGVEEMFADIGRQL 155
+I S +TS KTG VE F I ++L
Sbjct: 142 SERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKEL 184
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 33/189 (17%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ GE GVGK+S+ +Y F S K+T+G D KE VDD+ + +QLWDT G
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKF--SKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A E L GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQT 167
E+ ++S + ++TS K V+E F + ++L L+
Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETV---------AKLALEN 178
Query: 168 MGAGGIGTD 176
M + I D
Sbjct: 179 MDSDDIAAD 187
>gi|254579991|ref|XP_002495981.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
gi|238938872|emb|CAR27048.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
Length = 207
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL RY D + S K+T+G D KE VDD+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKY--SQQYKATIGADFLTKEVTVDDKVAT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LV+ + NA SF + E + +A E
Sbjct: 59 MQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVLSPETF 118
Query: 116 KIFLCGNN---EQCHNLIS--------------STYKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +S + TS K V+ F +I R +
Sbjct: 119 PFVILGNKVDVEESKKTVSVKSAQELAKSLGNVPLFLTSAKNAINVDTAFEEIARSALQQ 178
Query: 159 NRS 161
N++
Sbjct: 179 NQA 181
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIVVYDITKKKSFDCIDKWIEDVKNERGEDNVILCVVGNKSDLT 129
Query: 124 -----------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
++ L + + +TS K G V+ +F I + L
Sbjct: 130 DERQVSTEDGEKKAKELGAKIFMETSTKAGYNVKNLFKKIAKSL 173
>gi|290973160|ref|XP_002669317.1| rab family small GTPase [Naegleria gruberi]
gi|284082863|gb|EFC36573.1| rab family small GTPase [Naegleria gruberi]
Length = 261
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 24/186 (12%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFN-KEYKVDDRSIQMQLW 64
+PE KVIL GE VGK+ LF R + F S+ + T+G+D FN K+YK+ D + LW
Sbjct: 55 IPEGKVILVGETMVGKTCLFVRITKNVF--GSNYRPTIGMD-FNIKKYKIYDIPFSLVLW 111
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGN 122
DT G ER S+++SY++ A A IL F L+ + H + ++ T+AE N K +L G
Sbjct: 112 DTAGQERFKSLSTSYHRGASACILTFDLNAPDTLHAVRGWYNQVKTHAEEPNIKWYLVGT 171
Query: 123 -------------NEQCHNLISSTYKTSCKTGEGVEEMFADIG-----RQLILSNRSRLE 164
+ L + ++ S K G V+++F I +LI N S
Sbjct: 172 KCDLVKHVDEVEVKQLAEELKAEYWEVSSKEGINVDKLFNRIAFVAWKDKLIKWNDSNTS 231
Query: 165 LQTMGA 170
T+ +
Sbjct: 232 TNTIPS 237
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + V+ + I+ Q+WDT G
Sbjct: 21 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 78
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N +I L GN +
Sbjct: 79 ERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDLKH 138
Query: 129 LISST 133
L + T
Sbjct: 139 LRAVT 143
>gi|326437703|gb|EGD83273.1| small GTP binding protein RAB6A [Salpingoeca sp. ATCC 50818]
Length = 207
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N +SF S+ + ++ ++ I L GN
Sbjct: 72 ERFRSLIPSYIRDSSVAVVVYDITNRSSFQQTSRWIDDVRAERGQDVIIMLVGNKTDLAD 131
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIG 152
+ L +TS K G V+E+F +
Sbjct: 132 KRQVSIDEGERRAKELNVMFIETSAKAGHNVKELFRRVA 170
>gi|297263161|ref|XP_001095709.2| PREDICTED: ras-related protein Rab-7a [Macaca mulatta]
Length = 208
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M S K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 2 MTSWKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 59
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +F L E + A EN
Sbjct: 60 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 119
Query: 116 KIFLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN N +T ++TS K VE+ F I R L
Sbjct: 120 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQE 178
Query: 161 SRLEL 165
+ +EL
Sbjct: 179 TEVEL 183
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDLSH 131
Query: 129 L 129
+
Sbjct: 132 M 132
>gi|224098602|ref|XP_002188069.1| PREDICTED: ras-related protein Rab-9B [Taeniopygia guttata]
Length = 201
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYAD 110
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + VDD+ ++ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEF--SLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F + + L E+ + E N I L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKADLRH 132
Query: 129 LISSTYKTSCKTGEGVEEMF 148
L + T + + E + F
Sbjct: 133 LRAVTTEDATAFAEREKTFF 152
>gi|198430343|ref|XP_002121682.1| PREDICTED: similar to GTP-binding protein [Ciona intestinalis]
Length = 209
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 71 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 130
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS KTG V+++F + L
Sbjct: 131 KRQVSIEEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAAL 172
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +V+ R+++ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +S+ L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>gi|405119344|gb|AFR94117.1| RAB small monomeric GTPase [Cryptococcus neoformans var. grubii
H99]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y F S+ K+T+G D +E VDDR +
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRF--STQYKATIGADFLTRELVVDDRVVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ +++ SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ ++S ++TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDMEESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKN-ALA 177
Query: 159 NRSRLELQTMGAGGIGTDS 177
+ EL I DS
Sbjct: 178 QEAETELYADYPDPIRIDS 196
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSL-DNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + D S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQWLQEIDRYASENVNKLLVGN 122
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDLRH 131
Query: 129 LIS 131
L S
Sbjct: 132 LRS 134
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 24/195 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ GE VGKSS+ R+ D F + +ST+G+D K+ +D ++++ +WDT G
Sbjct: 12 KLLMIGESNVGKSSIILRFTEDEF--HENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI--FLCGNNEQCH 127
ER ++T SYY+ + AILV+ + + +F L L E+ TY I + GN
Sbjct: 70 ERFRTLTPSYYRDGQGAILVYDVTDRITFMKLETWLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLI----LSNRSRLELQTMG 169
N ST ++S KT +G++ F ++ +++I L +R L L++ G
Sbjct: 130 NREVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDRHTL-LKSYG 188
Query: 170 AGGIGTDSFKLGGRG 184
G IG + G RG
Sbjct: 189 NGNIGGTRHR-GQRG 202
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + +F +++ L E+ +A +N I L GN +
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDLRH 128
Query: 129 L 129
L
Sbjct: 129 L 129
>gi|10120632|pdb|1D5C|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab6 Complexed
With Gdp
Length = 162
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+S+ R+ YDTF ++ +ST+G+D +K +D+ +++QLWDT G
Sbjct: 3 KLVFLGEQAVGKTSIITRFXYDTF--DNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + AAI+V+ + N SF ++ + +I+ ++ I L GN +
Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
L TY +TS K G ++ +F +L
Sbjct: 121 LRKVTYEEGXQKAQEYNTXFHETSAKAGHNIKVLFKKTASKL 162
>gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117371|ref|XP_772912.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321264105|ref|XP_003196770.1| RAB small monomeric GTPase [Cryptococcus gattii WM276]
gi|50255530|gb|EAL18265.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229710|gb|AAW46112.1| RAB small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317463247|gb|ADV24983.1| RAB small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MA+ K KVI+ G+ GVGK+SL +Y F S+ K+T+G D +E VDDR +
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRF--STQYKATIGADFLTRELVVDDRVVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ +++ SF L E + A EN
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ ++S ++TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKIDMEESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKN-ALA 177
Query: 159 NRSRLELQTMGAGGIGTDS 177
+ EL I DS
Sbjct: 178 QEAETELYADYPDPIRIDS 196
>gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase
Length = 170
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 8 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN
Sbjct: 66 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 125
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ L +TS K G V+++F + L
Sbjct: 126 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 167
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASHKKLLLKVIILGDSGVGKTSLMNQYVSKKF--SNQYKATIGADFLTKEVMVDDRIVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +SF L E + A +N
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN + C + + Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKVDLESKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKN-ALAQE 177
Query: 161 SRLEL 165
S +EL
Sbjct: 178 SEVEL 182
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLES--KSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + A+F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDLSH 131
Query: 129 L 129
+
Sbjct: 132 M 132
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis domestica]
Length = 217
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 19/167 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + I + ++++T+G+D + +VD + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFK--SGIYTDTQQNTIGVDFMVRSLEVDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN +
Sbjct: 77 ERFRTITQSYYRSANAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKADLWD 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSN 159
+ H L + +TS K + ++E+F + R+LI N
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESKNIDEVFMLMARELIARN 183
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGK+++ ++ F S K+T+G++ NK+ +DD+ I+ QLWDT G
Sbjct: 12 KIVIIGDSGVGKTNIMTQFTRGEF--SEETKTTVGVEFANKQLVIDDKIIKAQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENA-KIFLCGNNEQCHN 128
ER +I SSYYK A A++VF + ++F + + + E+ N I L GN +
Sbjct: 70 ERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGNKSDLRH 129
Query: 129 L------ISSTY---------KTSCKTGEGVEEMFADIGRQLILSNRS 161
L +SS Y +TS K G V E F + ++ N++
Sbjct: 130 LRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIHSKNKN 177
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMG 169
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVELYNEF 186
Query: 170 AGGIGTD 176
I D
Sbjct: 187 PKPIKLD 193
>gi|395546391|ref|XP_003775071.1| PREDICTED: ras-related protein Rab-9B [Sarcophilus harrisii]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYAD 110
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKF--SNQYKATIGADFLTKEVMVDDRIVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +SF L E + A +N
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN + C + + Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKVDLETKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNA-LAQE 177
Query: 161 SRLEL 165
S +EL
Sbjct: 178 SEVEL 182
>gi|410924265|ref|XP_003975602.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Takifugu
rubripes]
gi|225706442|gb|ACO09067.1| Ras-related protein Rab-6B [Osmerus mordax]
Length = 208
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLEE 132
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAAL 174
>gi|392572292|gb|EIW65444.1| hypothetical protein TREMEDRAFT_70574 [Tremella mesenterica DSM
1558]
Length = 216
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 24 KLVFLGEQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 81
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGN------ 122
ER S+ SY + + A++V+ + N SF S+ + ++ ++ I L GN
Sbjct: 82 ERFRSLIPSYIRDSSVAVIVYDITNRTSFLNTSKWVDDVRNERGQDVIIVLVGNKTDLND 141
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+++ L + +TS K G V+ +F I L
Sbjct: 142 KRQVTPEELDKRAKELGVMSIETSAKAGHNVKTLFKKIAMAL 183
>gi|145535806|ref|XP_001453636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421358|emb|CAK86239.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGKS + R++ + F ++ +T+G+D K +++D ++++Q+WDT G
Sbjct: 17 KVLLIGNSGVGKSCMLMRFSENQF--TNHFYNTIGVDFKIKVFQIDKSTVKLQIWDTAGQ 74
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----- 123
+R +ITSSYY+ A+ I+VF + + SF+ + Q + EI + AE+ L GN
Sbjct: 75 DRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQWMQEIDKFAAESVNKILVGNKIDSSQ 134
Query: 124 --------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
E S +Y +TS KT +E F+ I RQ+I
Sbjct: 135 RRVSTDEAEALAKSYSISYIETSAKTNINIENCFSLITRQII 176
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN--NEQC 126
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTS 127
Query: 127 HNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
++S+ +TS K VEE F + ++ + + + AGG
Sbjct: 128 QKVVSTETAKAFADELGIPFLETSAKNATNVEEAF------MAMTAAIKTRMASQPAGGS 181
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 182 KPSTVQIRGQ 191
>gi|238584079|ref|XP_002390448.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
gi|215453864|gb|EEB91378.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQLWDT G
Sbjct: 7 KVIILGDSGVGKTSLMNQYVNKRF--SNQYKATIGADFLTKEVMVDDRLVTMQLWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN- 123
ER S+ ++Y+ A+ +LV+ +++A SF L E + A EN + GN
Sbjct: 65 ERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKI 124
Query: 124 --EQCHNLISST--------------YKTSCKTGEGVEEMFADIGR---------QLILS 158
E+ ++ ++TS K VE+ FA + + QL +
Sbjct: 125 DVEENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFATVAKNALTQEAEEQLYVD 184
Query: 159 NRSRLELQTMGAGGIGTD 176
++L + + G D
Sbjct: 185 YPDPIQLDSESSQSYGCD 202
>gi|194893325|ref|XP_001977854.1| GG18010 [Drosophila erecta]
gi|195479590|ref|XP_002100946.1| GE17342 [Drosophila yakuba]
gi|190649503|gb|EDV46781.1| GG18010 [Drosophila erecta]
gi|194188470|gb|EDX02054.1| GE17342 [Drosophila yakuba]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GVGKSSL R++ DTF S S +T+G+D + ++ +++Q+WDT G
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN-NEQCHN 128
ER +ITS+YY+ I+V+ + N SF + + L EI + K L GN N+
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTNGDSFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDR 127
Query: 129 LISST--------------YKTSCKTGEGVEEMFADIGRQLI 156
+ T ++TS K VE MF I RQ++
Sbjct: 128 KVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVL 169
>gi|126308787|ref|XP_001378194.1| PREDICTED: ras-related protein Rab-37-like [Monodelphis domestica]
Length = 273
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ + F+S + +T+G+D NK VD +++Q+WDT G
Sbjct: 80 KVMLLGDSGVGKTCFLIHFKDGAFLSGTF-IATVGIDFRNKVVTVDGTKVKLQIWDTAGQ 138
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCH- 127
ER S+T +YY+ A+A +L++ + N +SF + L EI YA+ + I L GN +
Sbjct: 139 ERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQKDVVIMLLGNKADVNR 198
Query: 128 ---------NLISSTY-----KTSCKTGEGVEEMFADIGRQL 155
++ Y +TS KTG VE F I R+L
Sbjct: 199 ERVVRSEDGQTLAREYGVPFMETSAKTGMNVELAFLAIAREL 240
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKF--SNQYKATIGADFLTKEVMVDDRIVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + +SF L E + A +N
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGN--------------NEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
+ GN + C + + Y +TS K VE+ F I + L+
Sbjct: 119 PFVVLGNKVDLETKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNA-LAQE 177
Query: 161 SRLEL 165
S +EL
Sbjct: 178 SEVEL 182
>gi|363739586|ref|XP_414855.3| PREDICTED: ras-related protein Rab-26 [Gallus gallus]
Length = 253
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ S ST+G+D NK VD +++Q+WDT G
Sbjct: 62 KVMLVGDSGVGKTCLLVRFKDGAFLAGSF-ISTVGIDFRNKVLTVDGVKVKLQIWDTAGQ 120
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER S+T +YY+ A A +L++ + N ASF + L EI YA ++ + L GN
Sbjct: 121 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQQDVVLMLLGNKVDSAQ 180
Query: 123 ----NEQCHNLISSTY-----KTSCKTGEGVEEMFADIGRQL-----ILSNRSRLELQ 166
+ ++ Y +TS K+G VE F I ++L L N + +L
Sbjct: 181 DRVVKREDGEKLAKEYGVPFMETSAKSGLNVELAFTAIAKELKHRSMKLPNEPKFKLH 238
>gi|334350516|ref|XP_001374469.2| PREDICTED: ras-related protein Rab-9B-like [Monodelphis domestica]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F S + T+G++ N++ +VD R + +Q+WDT G
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFH--TIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE 113
ER S+ + +Y+ A+ +L FS+D+ SF LS E + YA+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYAD 110
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 22/176 (12%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
MAS K KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQ+WDT G ER S+ ++Y+ A+ +LVF + A SF L E + A EN
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQASPRDSENF 118
Query: 116 KIFLCGNN----------EQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLI 156
+ GN ++ N +S ++TS K VE+ F I + +
Sbjct: 119 PFVVLGNKVDLENRAVTMKRAQNWCTSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YDTF ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 5 KLVFLGEQSVGKTSLITRFMYDTF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N ASF S+ + ++ + I L GN +
Sbjct: 63 ERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSD 122
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T +TS K G V+ +F I + L
Sbjct: 123 KRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQAL 164
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + ++D ++I+ Q+WDT G
Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDS--KSTIGVEFATRSIQIDGKTIKAQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGN-NEQCH 127
ER +ITS+YY+ A A+LV+ + + SF +++ L E+ +A+ N I L GN +Q H
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQRH 128
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ VGKS L R+A D F S KST+G++ + VD ++I+ Q+WDT G
Sbjct: 13 KVVLIGDSAVGKSQLLSRFARDEFTLES--KSTIGVEFQTRTISVDGKTIKAQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER ++TS+YY+ A A+LV+ + +F +++ L E+ +A+ N I + GN N
Sbjct: 71 ERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDLSN 130
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFAEDTY--TQDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ ++Q L EI YA + L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATGGVMKLLVGNKSDLKD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL 155
Y +TS VE+ F ++ RQ+
Sbjct: 128 KKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQI 169
>gi|195163365|ref|XP_002022521.1| GL12921 [Drosophila persimilis]
gi|194104513|gb|EDW26556.1| GL12921 [Drosophila persimilis]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ + GVGKSSL R++ DTF S S +T+G+D + +D +++Q+WDT G
Sbjct: 10 KLLIIADSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN---NEQC 126
ER +ITS+YY+ I+V+ + N SF + + L EI + L GN + C
Sbjct: 68 ERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDC 127
Query: 127 HNLISST------------YKTSCKTGEGVEEMFADIGRQLI 156
+I+ Y+TS K V+ MF I RQ++
Sbjct: 128 KVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVL 169
>gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio]
Length = 211
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 18 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 75
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + AA++V+ + N SF S+ + ++ T + I L GN
Sbjct: 76 ERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLGD 135
Query: 124 ----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
++ L +TS K G V+++F + L
Sbjct: 136 KRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAAL 177
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,748,439,441
Number of Sequences: 23463169
Number of extensions: 101113397
Number of successful extensions: 331484
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13206
Number of HSP's successfully gapped in prelim test: 5660
Number of HSP's that attempted gapping in prelim test: 304730
Number of HSP's gapped (non-prelim): 19744
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)