BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17231
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.300 PE=3 SV=1
Length = 205
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
M+S K KVI+ G+ GVGK+SL +Y F S+S K+T+G D +E VDDR +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKF--SASYKATIGADFLTREVLVDDRQVT 58
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENA 115
MQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L E + A +N
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNF 118
Query: 116 KIFLCGNN---EQCHNLISST--------------YKTSCKTGEGVEEMFADIGRQLILS 158
+ GN E+ +IS+ ++TS K VE+ F I R ++
Sbjct: 119 PFVVLGNKIDMEESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQ 178
Query: 159 NRS 161
S
Sbjct: 179 EES 181
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 7 PEQ----KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQ 62
PE K++L G+ GVGKS L R+A D++ + + ST+G+D K +D ++I++Q
Sbjct: 5 PEHDFFFKILLIGDSGVGKSCLLLRFADDSW--TDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 63 LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCG 121
+WDT G ER +ITSSYY+ A+ ILV+ + SF + Q + EI YA EN L G
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVG 122
Query: 122 NNEQCHN--LISST-------------YKTSCKTGEGVEEMFADIGRQL 155
N N ++ S +TS K VEE F + R +
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F S+ K+T+G D KE VDDR + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S++ ++Y+ A+ +LVF + +F L LE + A EN + GN
Sbjct: 68 ERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKI 127
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 128 DLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 182
>sp|P35284|RAB12_RAT Ras-related protein Rab-12 OS=Rattus norvegicus GN=Rab12 PE=1 SV=2
Length = 243
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 43 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 100
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCET 160
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|Q6IQ22|RAB12_HUMAN Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=1 SV=3
Length = 244
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 44 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 160
>sp|P35283|RAB12_MOUSE Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3
Length = 243
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 43 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 100
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 159
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGN 121
>sp|P51152|RAB12_CANFA Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12
PE=2 SV=1
Length = 208
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+VI+ G GVGK+SL R+ DTF + KST+G+D K ++ + I++Q+WDT G
Sbjct: 8 QVIIIGSRGVGKTSLMERFTDDTFCEAC--KSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCH 127
ER SITS+YY+ A+ ILV+ + +F L + + I YA E+A++ L GN C
Sbjct: 66 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 124
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDS--YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN-NEQCH 127
ER +ITSSYY+ A I+ + + + SF+ + Q L EI YA EN L GN N+
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTS 127
Query: 128 NLISST--------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGI 173
+ ST +TS K VEE F + ++ + + + AGG
Sbjct: 128 QKVVSTETAKAFADELGIPFLETSAKNATNVEEAF------MAMTAAIKTRMASQPAGGA 181
Query: 174 GTDSFKLGGR 183
+ ++ G+
Sbjct: 182 KPPTVQIRGQ 191
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN +
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTS 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
Y +TS K VE+ F + + + NR + AGG
Sbjct: 128 KKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAE--IKNRMASQPIPTKAGG 184
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D + I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGN 121
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++++ +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA E L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD 127
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E +L +TS K VE+ F + RQ+
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F + K+T+G D KE +VDD+ + MQ+WDT G
Sbjct: 10 KVIILGDSGVGKTSLMNQYVQKKF--TKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
ER S+ S++Y+ A+ +LVF ++NA SF L E + A
Sbjct: 68 ERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQA 110
>sp|Q9ULW5|RAB26_HUMAN Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3
Length = 256
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNN-EQCH 127
ER S+T +YY+ A A +L++ + N ASF + L EI YA+ + + L GN + H
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 128 NLI---------SSTY-----KTSCKTGEGVEEMFADIGRQL 155
+ + Y +TS KTG V+ F I ++L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>sp|Q99260|YPT6_YEAST GTP-binding protein YPT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT6 PE=1 SV=1
Length = 215
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE GVGK+SL R+ YDTF ++T+G+D +K +DD++I++QLWDT G
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTF--DDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC--GNN---- 123
ER S+ SY + + AI+V+ + SF + + + ++ + + LC GN
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLS 129
Query: 124 ----------EQCHNLISST--YKTSCKTGEGVEEMFADIGRQL 155
E+ L+ + +TS K G V+ +F I + L
Sbjct: 130 DERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL 173
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 25/191 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D +++++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +ITSSYY+ A +V+ + + SF+ + Q L EI YA E L GN +
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD 127
Query: 129 LISSTY---------------KTSCKTGEGVEEMFADIGRQL-------ILSNRSRLELQ 166
Y +TS K VE+ F + RQ+ I +N ++ +
Sbjct: 128 KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKASVN 187
Query: 167 TMGAGGIGTDS 177
G+ +S
Sbjct: 188 VSPGHGVSNNS 198
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q22782|RAB6B_CAEEL Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2
PE=2 SV=1
Length = 205
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+ SY + + A++V+ + N+ SFH S+ + ++ T + I L GN +
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 129
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIG 152
T +TS K G V+++F I
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q5M7U5|RAB19_RAT Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1
Length = 217
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + S S+++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFKSGVY--SESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K ++E+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ GVGK+SL +Y F + K+T+G D KE +VDD+ + MQ+WDT G
Sbjct: 10 KIIILGDSGVGKTSLMNQYVQKKF--TKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
ER S+ S++Y+ A+ +LVF ++NA SF L E + A
Sbjct: 68 ERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQA 110
>sp|P35294|RAB19_MOUSE Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3
Length = 217
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ VGK+ + + + + S S+++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KVILIGDSNVGKTCVVQHFKSGVY--SESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K ++E+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|P61294|RAB6B_MOUSE Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=1 SV=1
Length = 208
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>sp|Q9NRW1|RAB6B_HUMAN Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1
Length = 208
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>sp|A6QR46|RAB6B_BOVIN Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1
Length = 208
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR++++QLWDT G
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNN----- 123
ER S+ SY + + A++V+ + N SF S+ + ++ T + I L GN
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
EQ +S + +TS KTG V+++F + L
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A DT+ + S ST+G+D + ++D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER ++TSSYY+ A I+V+ + + S+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 121
>sp|Q923S9|RAB30_MOUSE Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1
Length = 203
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>sp|Q15771|RAB30_HUMAN Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2
Length = 203
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>sp|Q17QB7|RAB30_BOVIN Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1
Length = 203
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F + +T+G+D K +++ +++Q+WDT G
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNN----- 123
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 128
Query: 124 ---------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLILSNR 160
E+ Y +TS K + VE++F D+ +LI R
Sbjct: 129 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 175
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ G GKSSL R+ D F+ ++ST+G F++ V+D +++ ++WDT G
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+ YY+ A AAI+VF + N ASF + + E+ N + L GN +
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129
Query: 129 LI------SSTY---------KTSCKTGEGVEEMFADIGRQL 155
+ TY +TS KT V+E+F +I R+L
Sbjct: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+A D+++ S ST+G+D + + D ++I++Q+WDT G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI--STIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN 122
ER +ITSSYY+ A I+V+ + + SF+ + Q L EI YA EN L GN
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
>sp|A4D1S5|RAB19_HUMAN Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2
Length = 217
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + + + ++++T+G+D + +D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVY--TETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWE 136
Query: 125 QCHNLIS------------STYKTSCKTGEGVEEMFADIGRQLILSNRSRL 163
+ H L + +TS K + +EE+F + ++LI N L
Sbjct: 137 KRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHL 187
>sp|Q3ZC27|RAB19_BOVIN Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1
Length = 217
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 21/180 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+IL G+ VGK+ + + + ++ + +++T+G+D + ++D + ++MQ+WDT G
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYMEA--QQNTIGVDFTVRALEIDGKKVKMQVWDTAGQ 76
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY-AENAKIFLCGNN----E 124
ER +IT SYY+ A AAI+ + L ++F + + EI Y A N I L GN E
Sbjct: 77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWE 136
Query: 125 QCHNL------------ISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGG 172
+ H L + + +TS K + ++E+F + R+L+ R L L GA G
Sbjct: 137 KRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELM--ARHSLPLYGEGAPG 194
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + VDD+ I+ Q+WDT G
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEF--SLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + ++F + L E+ + + N + L GN +
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRH 132
Query: 129 LIS-------------STY--KTSCKTGEGVEEMFADIGRQL 155
L++ S Y +TS VE FA++ Q+
Sbjct: 133 LVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQI 174
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGN----- 122
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLA 126
Query: 123 -------NEQCH-------NLISSTYKTSCKTGEGVEEMFADIGRQL 155
+E H N I + S KT VE+ F I + L
Sbjct: 127 ESRVVSADEAKHVAEQNNMNYIEA----SAKTDSNVEKAFTTIAKAL 169
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEF--SLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER +ITS+YY+ A A+LV+ + + +F + + L E+ +A+ N I L GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKH 131
Query: 129 L 129
L
Sbjct: 132 L 132
>sp|Q4UB16|RAB1_THEAN Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1
Length = 220
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ G GKSSL R+A +T+ S S ST+G+D K K+D+ +I++Q+WDT G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTY--SESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYA-ENAKIFLCGN----- 122
ER +ITS+YY+ A I V+ + N SF H+ L +I YA N L GN
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLV 126
Query: 123 -------NEQCH-------NLISSTYKTSCKTGEGVEEMFADIGRQL 155
+E H N I + S KT VE+ F I + L
Sbjct: 127 DSRVVLADEAKHVAEQNNMNYIEA----SAKTDSNVEKAFTTIAKAL 169
>sp|Q29RR0|RAB26_BOVIN Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1
Length = 256
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVVDVDGMKVKLQIWDTAGQ 123
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF-LCGNN----- 123
ER S+T +YY+ A A +L++ + N ASF + L EI +A++ + L GN
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQ 183
Query: 124 ------EQCHNLIS----STYKTSCKTGEGVEEMFADIGRQL 155
E L +TS KTG V+ F I ++L
Sbjct: 184 ERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ VGKS+L R+A D F +S KST+G++ ++ ++ + I+ Q+WDT G
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNS--KSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-NAKIFLCGNNEQCHN 128
ER ++TS+YY+ A A+LV+ + +FH + + L E+ T+++ N L GN +
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
Query: 129 L 129
L
Sbjct: 134 L 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,065,984
Number of Sequences: 539616
Number of extensions: 2444181
Number of successful extensions: 9602
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 8192
Number of HSP's gapped (non-prelim): 1122
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)