RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17231
(189 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 107 bits (269), Expect = 1e-30
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGK+ + R++ D F S+ ST+G+D + ++D + I++Q+WDT G
Sbjct: 8 KLLLIGDSGVGKTCVLFRFSEDAFNSTF--ISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +IT++YY+ A +LV+ + N SF + + I +A + + + GN ++
Sbjct: 66 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND 125
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS K VE F + R +
Sbjct: 126 KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 167
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 106 bits (264), Expect = 7e-30
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGK+ L RR+ F +T+G+D K +++ +++Q+WDT G
Sbjct: 7 KIVLIGNAGVGKTCLVRRFTQGLFPPGQ--GATIGVDFMIKTVEINGEKVKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKI-FLCGNNEQCHN 128
ER SIT SYY+ A A IL + + SF L + L EI YA N I L GN
Sbjct: 65 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAE 124
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ +TS K + VE++F D+ +LI R
Sbjct: 125 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 171
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 102 bits (255), Expect = 1e-28
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ GVGKS L R+ D F S +T+G+D K ++ + +++Q+WDT G
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSF--ITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNN------ 123
ER +IT++YY+ A ILV+ + + +F + Q + +A + L N
Sbjct: 62 ERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 121
Query: 124 ---------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
L ++S K + V E+F + + +
Sbjct: 122 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 162
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 97.2 bits (241), Expect = 2e-26
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
+ K+++ GE GVGKSSL R+ DTF + +T+G+D K VD ++ +WD
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELA--ATIGVDFKVKTISVDGNKAKLAIWD 62
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE---NAKIFLCGN 122
T G ER ++T SYY+ A+ ILV+ + +F L L E+ TY + +
Sbjct: 63 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNK 122
Query: 123 NEQCHNLISST-------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLE 164
++ + + + S KT +GV+ F ++ + I+ E
Sbjct: 123 IDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEK-IIQTPGLWE 176
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 95.7 bits (237), Expect = 1e-25
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GVGKS L R++ DT+ + ST+G+D K ++D +++++Q+WDT G
Sbjct: 8 KLLLIGNSGVGKSCLLLRFSDDTYTNDY--ISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV-TYAENAKIFLCGNNEQCHN 128
ER +ITSSYY+ + I+V+ + + SF+ + L EI L GN +
Sbjct: 66 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKD 125
Query: 129 LIS---------------STYKTSCKTGEGVEEMFADIGRQLI 156
+TS VE+ F + RQ+
Sbjct: 126 KRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIK 168
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 94.6 bits (234), Expect = 2e-25
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGKS+L R+ + F S KST+G++ + +VD ++I+ Q+WDT G
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLES--KSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGN------ 122
ER ITS+YY+ A A+LV+ + ++ + + L E+ +A N I L GN
Sbjct: 64 ERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 123
Query: 123 ---------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLI 156
S +TS VEE F +I ++
Sbjct: 124 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIY 166
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 93.8 bits (232), Expect = 4e-25
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G+ GVGK+ L R+ F++ + ST+G+D NK VD +++Q+WDT G
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTF-ISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+T +YY+ A A +L++ + N ASF + L EI YA + + L GN +
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 126
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+TS KTG V+ F I ++L
Sbjct: 127 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 168
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 93.4 bits (231), Expect = 6e-25
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G VGK+S RYA D+F + ST+G+D K +D+ I++Q+WDT G
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAF--VSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER +IT++YY+ A IL++ + N SF+ + +I TY+ +NA++ L GN +
Sbjct: 65 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMED 124
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
+ ++ S K V++ F + +
Sbjct: 125 ERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVIC 167
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 91.9 bits (227), Expect = 2e-24
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K I+ G+ GVGKS L ++ F++ T+G++ + +V + I++Q+WDT G
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADC--PHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER ++T SYY+ A A++V+ + ++++ LS L + N I L GN
Sbjct: 64 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEA 123
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
T + S KTGE VE+ F + +++
Sbjct: 124 QRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 90.8 bits (224), Expect = 4e-24
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ GE VGK+SL R+ YD+F ++ ++T+G+D +K ++DR+I++QLWDT G
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTY--QATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 59
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
ER S+ SY + + AA++V+ + N SF ++ + ++ T + I L GN +
Sbjct: 60 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 119
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS K G V+++F + L
Sbjct: 120 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 89.6 bits (221), Expect = 2e-23
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K ++ G G GKS L ++ F S T+G++ +K V + +++Q+WDT G
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDS--NHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVT-YAENAKIFLCGNNEQCHN 128
ER S+T SYY+ A A+LV+ + + +++ L+ L + ++N I LCGN +
Sbjct: 65 ERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDA 124
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
T +TS TGE VEE F R+++
Sbjct: 125 DREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL 167
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 88.8 bits (219), Expect = 3e-23
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K I+ G+ GVGKS L ++ F T+G++ + +D + I++Q+WDT G
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVH--DLTIGVEFGARMVNIDGKQIKLQIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-ENAKIFLCGNNEQCHN 128
E SIT SYY+ A A+LV+ + +F+ L+ L + ++ N I L GN +
Sbjct: 63 ESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLES 122
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
+TS KT VEE F + +++
Sbjct: 123 RRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 165
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 85.1 bits (209), Expect = 7e-22
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
K+ + K++L GE VGKSSL R+ F +ST+G + +DD +++ ++W
Sbjct: 3 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQ--ESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHL-LEIVTYAENAKIFLCGNN 123
DT G ER S+ YY+ A+AAI+V+ + N SF + + N I L GN
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 124 EQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQL 155
N + +TS KT V E+F I ++L
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 83.4 bits (205), Expect = 4e-21
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
+ KVI+ G GVGKS+L ++ YD F+ D++ K+ +D +Q+ + D
Sbjct: 2 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKA---DSYRKKVVLDGEEVQIDILD 58
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNN 123
T G E A+I +Y++ E + VFS+ SF + +I+ EN L GN
Sbjct: 59 TAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNK 118
Query: 124 EQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+ + +TS KT V+++F D+ R++
Sbjct: 119 SDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 165
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 82.3 bits (202), Expect = 8e-21
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L GE VGK+SL RY + F +TLG K+ + + + + +WDT G
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKH--ITTLGASFLTKKLNIGGKRVNLAIWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
ER ++ YY+ + AILV+ + + SF + + E+ N N+
Sbjct: 63 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 122
Query: 130 ISST----------------YKTSCKTGEGVEEMFADIGRQLI 156
Y TS K +G+EE+F D+ +++I
Sbjct: 123 ERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 165
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 82.6 bits (203), Expect = 1e-20
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDR----------SI 59
K++ G+ GVGK++ RY + F +T+G+D K + + +
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDNKFNPKF--ITTVGIDFREKRVVYNAQGPNGSSGKAFKV 64
Query: 60 QMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY--AENAKI 117
+QLWDT G ER S+T+++++ A +L+F L + SF + + ++ EN I
Sbjct: 65 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 124
Query: 118 FLCGNNEQCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
L GN + ++TS TG+ VE+ + ++
Sbjct: 125 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 178
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 82.3 bits (202), Expect = 1e-20
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVIL G+ GVGKSSL RY + F + T+G++ NK+ +VD + MQ+WDT G
Sbjct: 8 KVILLGDGGVGKSSLMNRYVTNKFDTQL--FHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 65
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE-----NAKIFLCGNNE 124
ER S+ + +Y+ ++ +L FS+D++ SF LS E + YA+ + + GN
Sbjct: 66 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 125
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILS 158
ST ++TS K V F + R+++ +
Sbjct: 126 DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLAT 174
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 81.6 bits (200), Expect = 2e-20
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV L G+ GVGKSS+ R+ D+F + T+G K + + + +WDT G+
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNI--NPTIGASFMTKTVQYQNELHKFLIWDTAGL 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENAKIFLCGNNEQCHN 128
ER ++ YY+ + AAI+V+ + +F L + E+ + + + GN +
Sbjct: 64 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTD 123
Query: 129 LISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS K + E+F +I R++
Sbjct: 124 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 80.7 bits (198), Expect = 3e-20
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ G GVGKS+L ++ TFI D + KE +VD +++ DT G
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKY---DPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNN---- 123
E+ AS+ Y K + ILV+SL N SF + +I+ E + L GN
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLE 121
Query: 124 -----------EQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+TS K+ V+E+FA+I RQ+
Sbjct: 122 SEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 79.7 bits (195), Expect = 1e-19
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
V K++L GE VGKSS+ R+ + F + + T+G + +++ +++ ++WD
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENK--EPTIGAAFLTQRVTINEHTVKFEIWD 58
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ 125
T G ER AS+ YY+ A+AA++V+ + SF + E+ A I N+
Sbjct: 59 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKI 118
Query: 126 CHNLISST-------------------YKTSCKTGEGVEEMFADIGRQLIL 157
++TS KTGE V ++F IG ++ L
Sbjct: 119 DMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPL 169
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 78.9 bits (193), Expect = 2e-19
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 7 PEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDT 66
E K+++ G GVGKS+L + + F+ D++ K+ +D + + + DT
Sbjct: 2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEY---DPTIEDSYRKQVVIDGETCLLDILDT 58
Query: 67 GGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNNE 124
G E +++ Y + E + VF+++N SF + Q+ +I ++ + L GN
Sbjct: 59 AGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 118
Query: 125 QCHNLISST--------------YKTSCKTGEGVEEMFADIGRQL 155
+ +TS KT +GVE+ F + R++
Sbjct: 119 DLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 76.6 bits (187), Expect = 2e-18
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSI-QMQLWDTGG 68
KVI+ G+ GVGK+SL RY D + K+T+G D KE VD + MQ+WDT G
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQY--KATIGADFLTKEVTVDGDKVATMQVWDTAG 61
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNN 123
ER S+ ++Y+ A+ +LV+ + NA+SF + E + +A E + GN
Sbjct: 62 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNK 121
Query: 124 EQCHNLISST-----------------YKTSCKTGEGVEEMFADIGRQLILSNR 160
+ TS K V+ F +I R + N+
Sbjct: 122 IDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ 175
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 75.5 bits (184), Expect = 3e-18
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G VGKSS+ +RY F K T+G+D ++ +V+D +++ LWDT G
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDY--KKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
E +IT +YY+ A+A +LVFS + SF +S ++V + L N +
Sbjct: 62 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDD 121
Query: 130 ISST---------------YKTSCKTGEGVEEMFADIGRQLI 156
Y+TS K V E+F + + +
Sbjct: 122 SCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHL 163
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 75.9 bits (185), Expect = 4e-18
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KVI+ G+ GVGK+SL +Y F + K+T+G D KE VDDR + MQ+WDT G
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQY--KATIGADFLTKEVMVDDRLVTMQIWDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA-----ENAKIFLCGNNE 124
ER S+ ++Y+ A+ +LVF + +F L E + A EN + GN
Sbjct: 62 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 121
Query: 125 QCHNLISST---------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
N +T ++TS K VE+ F I R L + +EL
Sbjct: 122 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN-ALKQETEVEL 176
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 75.1 bits (183), Expect = 5e-18
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKS+L ++ F+S D++ K VD ++ + DT G
Sbjct: 8 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPT---IEDSYTKICSVDGIPARLDILDTAGQ 64
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGN----- 122
E ++ Y + +LVF++++ SF+ + + +I+ ++ + L GN
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE 124
Query: 123 ----------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ + + ++ S K V+E F + R +
Sbjct: 125 SQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAV 167
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 74.6 bits (182), Expect = 9e-18
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G GVGKS+L ++ F+ D++ K+ +VD + +++ DT G
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKY---DPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY--AENAKIFLCGNNEQCH 127
E+ ++ Y K + LV+S+ ++F+ L +I+ E+ + L GN
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLE 121
Query: 128 NLISST----------------YKTSCKTGEGVEEMFADIGRQL 155
+ ++S K+ V E+F D+ RQ+
Sbjct: 122 DERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 70.5 bits (171), Expect = 2e-16
Identities = 23/166 (13%), Positives = 60/166 (36%), Gaps = 27/166 (16%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++++ G GK+++ + T V+ ++I +WD GG
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEI-------VTTIPTIGFNVETVEYKNISFTVWDVGGQ 54
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTY--AENAKIFLCGNNEQCH 127
+++ + Y++ + I V ++ + + L+ ++ +A + + N +
Sbjct: 55 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 114
Query: 128 NLISST------------------YKTSCKTGEGVEEMFADIGRQL 155
N +++ T +G+G+ E + QL
Sbjct: 115 NAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 70.1 bits (170), Expect = 4e-16
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G+ G GK++ +R+ F +TLG++ + + I+ +WDT G
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKY--VATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGN------- 122
E+ + YY A+ AI++F + + ++ + ++V EN I LCGN
Sbjct: 63 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 122
Query: 123 ------NEQCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
Y S K+ E+ F + R+LI LE
Sbjct: 123 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI--GDPNLEF 169
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 69.7 bits (169), Expect = 8e-16
Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 32/176 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K ++ G+ VGK+ L Y + F DN++ VD + + + LWDT G
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEY---IPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYAENAKIFLCGNN----- 123
E + Y + +++ FSL + ASF +V ++ E+ + N I L G
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 123
Query: 124 ----------------------EQCHNLISSTY-KTSCKTGEGVEEMFADIGRQLI 156
+ + Y + S T G++ +F + R ++
Sbjct: 124 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 179
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 68.9 bits (167), Expect = 1e-15
Identities = 34/168 (20%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
+P K+++ G+ GVGKS+L ++ F+ D++ K ++D++ + + D
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDY---DPTIEDSYLKHTEIDNQWAILDVLD 58
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNN 123
T G E +++ Y + + ++V+S+ + ASF + + I+ + + + L N
Sbjct: 59 TAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANK 118
Query: 124 ---------------EQCHNLISSTYKTSCKTGE-GVEEMFADIGRQL 155
E +TS K V++ F D+ R +
Sbjct: 119 VDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVI 166
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 66.6 bits (161), Expect = 9e-15
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+I+ G+ VGK+ L R+ F + ++T+G+D + +D I++QLWDT G
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRT--EATIGVDFRERAVDIDGERIKIQLWDTAGQ 61
Query: 70 ER-VASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNNEQC 126
ER S+ YY+ A + V+ + N ASFH L + E + + L GN
Sbjct: 62 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL 121
Query: 127 HNLISST---------------YKTSCKT---GEGVEEMFADI 151
+ I ++TS K + VE +F +
Sbjct: 122 RSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 66.6 bits (161), Expect = 1e-14
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
++++ G GVGKS+L ++ F++ D++ K+ +DDR+ ++ + DT G
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDY---DPTIEDSYTKQCVIDDRAARLDILDTAGQ 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV----------------TYAE 113
E ++ Y + E +LVFS+ + SF + + +I+ +
Sbjct: 64 EEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLD 123
Query: 114 NAKIFLCGNNEQCHNLISSTY-KTSCKTGEGVEEMFADIGRQL 155
+ + +Q + TY + S K V++ F ++ R +
Sbjct: 124 HQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVI 166
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 65.4 bits (158), Expect = 2e-14
Identities = 27/178 (15%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 6 VPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWD 65
+PE ++ + G+ GKSSL R+ ++ +S + + KE VD ++ + + +
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTES----EQYKKEMLVDGQTHLVLIRE 58
Query: 66 TGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQ 125
G + L A + Q + L G ++
Sbjct: 59 EAGAPDAKFSGWADA-VIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 117
Query: 126 CHNLISST------------------YKTSCKTGEGVEEMFADIGRQLILSNRSRLEL 165
Y+T G V+ +F ++ ++ +++ R + +L
Sbjct: 118 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQK-VVTLRKQQQL 174
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 65.4 bits (158), Expect = 3e-14
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 32/176 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K ++ G+ VGK+ L Y + F S T+ DN+ + + L+DT G
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEY--VPTVF-DNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYAENAKIFLCGN------ 122
E + Y + ++ FS+ + +SF +V + + EI + L G
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121
Query: 123 -----------------NEQCHNL-----ISSTYKTSCKTGEGVEEMFADIGRQLI 156
E L + S T +G++ +F + +
Sbjct: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 63.8 bits (154), Expect = 9e-14
Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 21/164 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+V + G GVGKSSL R+ TF S D + + D +Q+ DT G
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESY---IPTVEDTYRQVISCDKSICTLQITDTTGS 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQ---HLLEIVTYAENAKIFLCGNNEQC 126
+ ++ A ILV+S+ + S L + EI E+ I L GN
Sbjct: 61 HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDE 120
Query: 127 HNLISST---------------YKTSCKTGEGVEEMFADIGRQL 155
+TS K V+E+F ++
Sbjct: 121 SPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLE 164
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 63.6 bits (153), Expect = 1e-13
Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+ + G VGKSSL ++ F+ S + F K V+ + +QL DT G
Sbjct: 6 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIE---NTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNNEQCH 127
+ + +Y ILV+S+ + SF V+ +++ I L GN + H
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH 122
Query: 128 NLISST---------------YKTSCKTGEGVEEMFADIGRQ 154
+ ++S K + ++F I +
Sbjct: 123 MERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILE 164
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 63.5 bits (153), Expect = 1e-13
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GK+ L + D F T+ +N+ + +VD + +++ LWDT G+
Sbjct: 4 KLVIVGDGACGKTCLLIVNSKDQFPEVY--VPTVF-ENYVADIEVDGKQVELALWDTAGL 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYAENAKIFLCGNNEQCHN 128
E + Y + ++ FS+D+ S ++ + E+ + N I L GN + N
Sbjct: 61 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 120
Query: 129 LISSTYK----------------------------TSCKTGEGVEEMFADIGRQLI 156
+ + S KT +GV E+F R +
Sbjct: 121 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 176
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 63.1 bits (152), Expect = 2e-13
Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 27/168 (16%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E ++++ G GK+++ + +++ V ++++ +WD G
Sbjct: 12 EMRILMLGLDAAGKTTILYKLKLGQSVTTIPT-------VGFNVETVTYKNVKFNVWDVG 64
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNNEQ 125
G +++ + YY + I V + Q L I+ E +A I + N +
Sbjct: 65 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 124
Query: 126 CHNLISST------------------YKTSCKTGEGVEEMFADIGRQL 155
+ + + +G+G+ E +
Sbjct: 125 LPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 62.8 bits (151), Expect = 3e-13
Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 33/177 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K+++ G+ GK++L +A D F + +N+ +++D + I++ LWDT G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENY---VPTVFENYTASFEIDTQRIELSLWDTSGS 60
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYAENAKIFLCGN------ 122
++ Y ++A ++ F + + VL + EI + N K+ L G
Sbjct: 61 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 120
Query: 123 -----------------NEQCHNL-----ISSTYKTSCKTGE-GVEEMFADIGRQLI 156
+Q N+ ++ + S E V ++F +
Sbjct: 121 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 177
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 59.2 bits (142), Expect = 6e-12
Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 27/168 (16%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E ++++ G G GK+++ R +++ K T+G + YK ++++ +WD G
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTT---KPTIGFNVETLSYK----NLKLNVWDLG 69
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC------- 120
G + YY A I V + S+ L ++ E L
Sbjct: 70 GQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 129
Query: 121 -------------GNNEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
N + + S +S GEG+ E + +
Sbjct: 130 QPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 177
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 59.0 bits (141), Expect = 7e-12
Identities = 38/166 (22%), Positives = 56/166 (33%), Gaps = 19/166 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+V+L GE GVGKS+L +A S S LG D + + VD S + L D
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHD-SMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 63
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLE---IVTYAENAKIFLCGNNEQC 126
+ + A L+ + + L E+ I L GN
Sbjct: 64 KGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDL 123
Query: 127 HNLISST---------------YKTSCKTGEGVEEMFADIGRQLIL 157
+ +TS V+E+F I RQ+ L
Sbjct: 124 VRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRL 169
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 58.5 bits (140), Expect = 1e-11
Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 32/176 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K ++ G+ VGK+ L YA D F D++ V + + L+DT G
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEE---YVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-HVLSQHLLEIVTYAENAKIFLCGNN----- 123
E + Y + ++ FS+ N ASF +V + + E+ YA N L G
Sbjct: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127
Query: 124 ------------------EQCHNLISST-----YKTSCKTGEGVEEMFADIGRQLI 156
EQ L + S T +G++ +F + ++
Sbjct: 128 DPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 57.4 bits (137), Expect = 2e-11
Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 21/170 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV+L G GVGKS+L R + ++ +++ VD + ++D
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVED----GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQ 58
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIF--LCGNNEQCH 127
+ + +A ++V+S+ + SF S+ +++ + + L GN
Sbjct: 59 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 118
Query: 128 NLISSTYK---------------TSCKTGEGVEEMFADIGRQLILSNRSR 162
+ TS V+ +F + RQ+ L S+
Sbjct: 119 RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRRDSK 168
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 57.3 bits (137), Expect = 3e-11
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 22/167 (13%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E K+ + G GVGKS+L R+ FI L++ + D +
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPT----LESTYRHQATIDDEVVSMEILDT 57
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNN-- 123
+ + ++ E +LV+ + + SF + + + N + L GN
Sbjct: 58 AGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKAD 117
Query: 124 -------------EQCHNLISSTYKTSCKTGEG-VEEMFADIGRQLI 156
+ L + Y+ S TGEG + E+F ++ R++
Sbjct: 118 LDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVR 164
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 55.1 bits (131), Expect = 2e-10
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 27/168 (16%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E ++++ G G GK+++ R T V ++++ Q+WD G
Sbjct: 5 EMRILILGLDGAGKTTILYRLQVGEV-------VTTIPTIGFNVETVTYKNLKFQVWDLG 57
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCH 127
G+ + YY +A I V + + L+ ++ E K L +
Sbjct: 58 GLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQD 117
Query: 128 NLISST--------------------YKTSCKTGEGVEEMFADIGRQL 155
+ T +KTS G G++E + L
Sbjct: 118 MEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 54.3 bits (129), Expect = 3e-10
Identities = 22/168 (13%), Positives = 56/168 (33%), Gaps = 27/168 (16%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E ++++ G GK+++ +++ + T+ ++ R ++ +WD G
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDV-------DTISPTLGFNIKTLEHRGFKLNIWDVG 54
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNNEQ 125
G + + S +Y++ + I V + + L ++ A + + N +
Sbjct: 55 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 114
Query: 126 CHNLISST------------------YKTSCKTGEGVEEMFADIGRQL 155
+S S TGE + + +
Sbjct: 115 LPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDI 162
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 53.9 bits (128), Expect = 4e-10
Identities = 21/166 (12%), Positives = 43/166 (25%), Gaps = 34/166 (20%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++ G GK++L D +TL ++ +I+ +D GG
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-------ATLQPTWHPTSEELAIGNIKFTTFDLGGH 54
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
+ + Y+ + + + F L + AE + +
Sbjct: 55 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAP 114
Query: 130 ISST---------------------------YKTSCKTGEGVEEMF 148
+ + + S G E F
Sbjct: 115 NAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAF 160
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 53.1 bits (126), Expect = 1e-09
Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 27/168 (16%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E KVI+ G GK+++ +++ + + ++ + + +WD G
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMN-------EVVHTSPTIGSNVEEIVINNTRFLMWDIG 67
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCH 127
G E + S ++YY E I+V + V + L +++ + + K L +
Sbjct: 68 GQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQD 127
Query: 128 NLISST--------------------YKTSCKTGEGVEEMFADIGRQL 155
T TGEG+ + + +L
Sbjct: 128 VKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 51.5 bits (122), Expect = 4e-09
Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 27/175 (15%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQ 60
+ S E +++L G GK++L ++ A + S T G + + + + +
Sbjct: 9 LKSAPDQEVRILLLGLDNAGKTTLLKQLASEDI---SHITPTQGFNIKSVQSQ----GFK 61
Query: 61 MQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIF 118
+ +WD GG ++ SY++ + I V + F Q L E++ + +
Sbjct: 62 LNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVL 121
Query: 119 LCGNNEQCHNLISST------------------YKTSCKTGEGVEEMFADIGRQL 155
+ N + ++ S TGEGV++ + + +
Sbjct: 122 IFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 50.7 bits (120), Expect = 1e-08
Identities = 15/131 (11%), Positives = 38/131 (29%), Gaps = 10/131 (7%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
K++L G GKS+ ++ + T G+ EY + +++ ++ D GG
Sbjct: 4 KILLLGAGESGKSTFLKQMRII-----HGQDPTKGI----HEYDFEIKNVPFKMVDVGGQ 54
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAEN-AKIFLCGNNEQCHN 128
+ + + + S + + + I
Sbjct: 55 RSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSI 114
Query: 129 LISSTYKTSCK 139
++ +
Sbjct: 115 ILFLNKTDLLE 125
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 48.0 bits (113), Expect = 8e-08
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E K++L G GKS+ ++ S T G+ EY D +S+ ++ D G
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHG----SGVPTTGII----EYPFDLQSVIFRMVDVG 53
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHV 100
G ++ + + + +L V
Sbjct: 54 GQRSERRKWIHCFENVTSIMFLVALSEYDQVLV 86
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 47.4 bits (111), Expect = 8e-08
Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 26/168 (15%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E ++ L G GK++ A F K+ ++ ++LWD G
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPT------VGFNMRKITKGNVTIKLWDIG 55
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA--ENAKIFLCGNNEQ 125
G R S+ Y + A + + + L ++ + + + GN
Sbjct: 56 GQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRD 115
Query: 126 CHNLISST------------------YKTSCKTGEGVEEMFADIGRQL 155
+ Y SCK + ++ + +
Sbjct: 116 LPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 163
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 47.7 bits (112), Expect = 1e-07
Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 21/185 (11%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
V+ G GK+ LF R + + +++ + + + + + G
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ---TSITDSSAIYKVNNNRGNSLTLIDLPGHE 58
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASF-----HVLSQHLLEIVTYAENAKIFLCGNNE 124
+ + A A + V L Q L++ + + + + N
Sbjct: 59 SLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACN-- 116
Query: 125 QCHNLISSTYKTSCKTGEGVEEMFADIGRQLILSNRSRLELQTMGAGGIGTDSFKLGGRG 184
K + + + + ++L +R T +LG +G
Sbjct: 117 ----------KQDIAMAKSAKLIQQQLEKELNTLRVTR-SAAPSTLDSSSTAPAQLGKKG 165
Query: 185 SEEVF 189
E F
Sbjct: 166 KEFEF 170
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 47.0 bits (110), Expect = 2e-07
Identities = 17/180 (9%), Positives = 44/180 (24%), Gaps = 39/180 (21%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
K++ G GK++L D ++ + +D G
Sbjct: 13 TGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPT-------LHPTSEELTIAGMTFTTFDLG 65
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCH 127
G + + +Y + + + + L ++T A + + +
Sbjct: 66 GHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKID 125
Query: 128 NLISST--------------------------------YKTSCKTGEGVEEMFADIGRQL 155
+ + + S +G E F + + +
Sbjct: 126 RPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 46.3 bits (109), Expect = 4e-07
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 10/93 (10%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
+++L G GKS++ ++ + T G+ E K + ++D G
Sbjct: 6 THRLLLLGAGESGKSTIVKQMRILHVV------LTSGIF----ETKFQVDKVNFHMFDVG 55
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHV 100
G + A I V + +
Sbjct: 56 GQRDERRKWIQCFNDVTAIIFVVASSSYNMVIR 88
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 43.8 bits (102), Expect = 2e-06
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 11/97 (11%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
E K++L G GKS++ ++ + G+ E + + +++D G
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHE-------AGTGI----VETHFTFKDLHFKMFDVG 50
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQH 104
G ++ A I +L + +
Sbjct: 51 GQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE 87
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 39.6 bits (91), Expect = 5e-05
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 21/162 (12%)
Query: 10 KVILCGEYGVGKSSLFRRYA-YDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
++++ G+ VGKS+L R D I + G ++ R I ++ DT G
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVT----DIPGTTRDVISEEIVIRGILFRIVDTAG 57
Query: 69 M---------ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL 119
+ T + A+ + V + +
Sbjct: 58 VRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKV 117
Query: 120 CGNNEQCHNLISS-------TYKTSCKTGEGVEEMFADIGRQ 154
+ I + K S GEG+E++ I R+
Sbjct: 118 DVVEKINEEEIKNKLGTDRHMVKISALKGEGLEKLEESIYRE 159
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 38.2 bits (87), Expect = 2e-04
Identities = 20/160 (12%), Positives = 42/160 (26%), Gaps = 15/160 (9%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV++ G GKSSL A + + + D + +D + +
Sbjct: 3 KVVIAGRPNAGKSSLLNALA-GREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNL 129
+ + + + A++ N
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 130 ISST--------------YKTSCKTGEGVEEMFADIGRQL 155
T + S +TGEGV+ + + + +
Sbjct: 122 ADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 161
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 35.4 bits (80), Expect = 0.002
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 13/114 (11%)
Query: 8 EQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
+ +I+ G GK+SL D+ + + L D + L D
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLS--------AADYDGSGVTLVDFP 54
Query: 68 GMERVASITSSYY-----KFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAK 116
G ++ S Y +V S + ++ L++I++ E++
Sbjct: 55 GHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSC 108
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 34.3 bits (77), Expect = 0.004
Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 32/171 (18%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
KV + G VGKS+LF S G + +V + DT G+
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSP---IPGTTRDPVDDEVFIDGRKYVFVDTAGL 66
Query: 70 ERVASITSSYYKF----------AEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFL 119
R + + + +A ++V LD Q + ++ A + +
Sbjct: 67 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVV 126
Query: 120 CGNNEQCHN-------------------LISSTYKTSCKTGEGVEEMFADI 151
+ + S TS G ++ M +
Sbjct: 127 FNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAM 177
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 32.8 bits (73), Expect = 0.011
Identities = 20/161 (12%), Positives = 43/161 (26%), Gaps = 16/161 (9%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTL----GLDNFNKEYKVDDRSIQMQLWDT 66
V++ G VGKS+LF + + +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 67 GGMERVASITSSYYKFAEAAILV-----------FSLDNAASFHVLSQHLLEIVTYAENA 115
+ + EA +++ A + + + AEN
Sbjct: 63 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENL 122
Query: 116 KIFLCGNNEQCHNL-ISSTYKTSCKTGEGVEEMFADIGRQL 155
+ F + ++L S + ++ M I ++L
Sbjct: 123 REFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKL 163
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 33.1 bits (74), Expect = 0.011
Identities = 20/167 (11%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
V L G GKSSL + T N ++ + D G+
Sbjct: 4 VGLVGYPNAGKSSLLAAMT-RAHPKIAPYPFTTLSPNLGVVEVSEEERFTL--ADIPGII 60
Query: 71 RVAS----ITSSYYKFAEAAILVFSLDNAAS--------------FHVLSQHLLEIVTYA 112
AS + + + ++ + +AA + + +
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVAL 120
Query: 113 ENAKIFLCGNNEQCHNLISS----TYKTSCKTGEGVEEMFADIGRQL 155
+ + + ++ S TG G+ + + +
Sbjct: 121 NKVDLLEEEAVKALADALAREGLAVLPVSALTGAGLPALKEALHALV 167
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 32.8 bits (73), Expect = 0.013
Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 26/167 (15%)
Query: 11 VILCGEYGVGKSSLFRRYA-YDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGM 69
+ + G VGKS+L + I+S ++T + + Q DT G+
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTT----RHRIVGIHTEGAYQAIYVDTPGL 63
Query: 70 ERVASIT-------SSYYKFAEAAILVFSLDNA--------------ASFHVLSQHLLEI 108
++ + +++F ++ + + ++
Sbjct: 64 HMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKV 123
Query: 109 VTYAENAKIFLCGNNEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
E A + S +TG V+ + A + + L
Sbjct: 124 DNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHL 170
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 32.4 bits (72), Expect = 0.017
Identities = 22/162 (13%), Positives = 39/162 (24%), Gaps = 17/162 (10%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDR---SIQMQLWDTG 67
V + G+ VGKS+L S R T + + L
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 68 GMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNE--- 124
Y A+ +V+ +D + + + L N+
Sbjct: 68 DALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 127
Query: 125 -----------QCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
+ S V E+ AD+ +
Sbjct: 128 AKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALM 169
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 32.1 bits (71), Expect = 0.024
Identities = 14/166 (8%), Positives = 41/166 (24%), Gaps = 24/166 (14%)
Query: 10 KVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTL-----GLDNFNKEYKVDDRSIQMQLW 64
+V G GKSS ++ +S+ + + + VD
Sbjct: 18 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEV 77
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDN------AASFHVLSQHLLEIVTYAENAKIF 118
+ Y + ++ + L + ++ + +
Sbjct: 78 PEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKA 137
Query: 119 LCGNNEQCHNLISSTYK-------------TSCKTGEGVEEMFADI 151
+ ++ + S +GV+++ +
Sbjct: 138 DKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKL 183
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 31.4 bits (70), Expect = 0.035
Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 29/171 (16%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
V L G VGKS+L + + T + N D RS M D G+
Sbjct: 4 VGLVGFPSVGKSTLLSVVS-SAKPKIADYHFTTLVPNLGMVETDDGRSFVM--ADLPGLI 60
Query: 71 RVAS----ITSSYYKFAEAAILVFSLDNAAS----------------FHVLSQHLLEIVT 110
A + + + E ++ + + + + L E
Sbjct: 61 EGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQ 120
Query: 111 YAENAKIFLCGNNEQCHNLISSTYK------TSCKTGEGVEEMFADIGRQL 155
K+ + E S T EG+ E+ ++ QL
Sbjct: 121 IIVANKMDMPEAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQL 171
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 31.7 bits (70), Expect = 0.038
Identities = 21/174 (12%), Positives = 41/174 (23%), Gaps = 25/174 (14%)
Query: 5 KVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSI----- 59
+PE + L G VGKSS ++ +S K + +
Sbjct: 22 GLPE--IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGY 79
Query: 60 -------QMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYA 112
+ +E + + L + N I
Sbjct: 80 GFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIV 139
Query: 113 ENAKIFLCGNNEQCHNL-----------ISSTYKTSCKTGEGVEEMFADIGRQL 155
K + + S +T +G +E + I + +
Sbjct: 140 IATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMI 193
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.9 bits (69), Expect = 0.065
Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 14/119 (11%)
Query: 1 MASIKVPEQKVILCGEYGVGKSSLFRRYA-YDTFISSSSRKSTLGLDNFNKEYKVDDRSI 59
+ V +++ G+ GVGKSS S + ++
Sbjct: 25 LKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEG--PRPVMVSRSRAGFTL 82
Query: 60 QMQ---------LWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV 109
+ + + + S + + V LD ++ I
Sbjct: 83 NIIDTPGLIEGGYINDMALNIIKSFLLDKT--IDVLLYVDRLDAYRVDNLDKLVAKAIT 139
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 30.5 bits (68), Expect = 0.10
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 6/121 (4%)
Query: 10 KVILCGEYGVGKSSLFRR-YAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
V + GE G GKSS +++ + + YK + + WD G
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIP-NVVFWDLPG 116
Query: 69 MERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE--NAKIFLCGNNEQC 126
+ +Y + + F + +A ++ ++I + +
Sbjct: 117 IGSTNFPPDTYLEKMKFYEYDFFIIISA--TRFKKNDIDIAKAISMMKKEFYFVRTKVDS 174
Query: 127 H 127
Sbjct: 175 D 175
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.5 bits (62), Expect = 0.43
Identities = 25/179 (13%), Positives = 46/179 (25%), Gaps = 34/179 (18%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVD-------DRSIQMQL 63
+I G VGKS+L R T + + +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 64 WDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAE---------- 113
+ + K + A+LV A + EI E
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 114 -----NAKIFLCGNNEQCHNLISSTYK------------TSCKTGEGVEEMFADIGRQL 155
K+ N ++ N ++ ++ S K G+ +E + I +
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVI 181
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 28.6 bits (62), Expect = 0.44
Identities = 9/63 (14%), Positives = 17/63 (26%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
++ E ++ G+ G GKSSL + + I
Sbjct: 17 TVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFE 76
Query: 62 QLW 64
+
Sbjct: 77 KDG 79
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 28.4 bits (63), Expect = 0.49
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 3 SIKVPEQKVILCGEYGVGKSSLFR 26
++ +L G G GKS
Sbjct: 19 DFEMGRDYCVLLGPTGAGKSVFLE 42
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.3 bits (59), Expect = 0.97
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 10 KVILCGEYGVGKSSLFR 26
K+I+ GE GVGK++L +
Sbjct: 2 KIIITGEPGVGKTTLVK 18
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 25.1 bits (55), Expect = 1.1
Identities = 6/22 (27%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Query: 120 CGNNEQCHNLISSTYKTSCKTG 141
C + +C N + S ++ C G
Sbjct: 13 CEHAGKCINTLGS-FECQCLQG 33
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.9 bits (58), Expect = 1.4
Identities = 9/68 (13%), Positives = 16/68 (23%), Gaps = 1/68 (1%)
Query: 84 EAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHNLISSTYKTSCKTGEG 143
L+ L + +C + + S KT EG
Sbjct: 171 SEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVR-VLYLSAKTREG 229
Query: 144 VEEMFADI 151
E++
Sbjct: 230 FEDLETLA 237
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 26.8 bits (58), Expect = 1.5
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 2 ASIKVPEQK-VILCGEYGVGKSSLFRRYA 29
+S+ P + V+ G G GKS+ + +
Sbjct: 7 SSLLSPNPEVVVAVGFPGAGKSTFIQEHL 35
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.7 bits (58), Expect = 1.7
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%)
Query: 11 VILCGEYGVGKSSLFRR-------YAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQL 63
I+ G GKSSL + Y +S ++R+ G + + Y + ++
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPG-EVHGEHYFFVNHDEFKEM 63
Query: 64 WDTGGMERVASITSSYYKFAE-AAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLC 120
A + +YY + A V + + Q +I +A+
Sbjct: 64 ISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFI 121
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 26.7 bits (59), Expect = 1.8
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++ + + + V G G GKS+L
Sbjct: 38 NLSIEKGETVAFVGMSGGGKSTLIN 62
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 26.6 bits (57), Expect = 2.0
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 11 VILCGEYGVGKSSLFRRYA 29
++ G GKSS+ +
Sbjct: 32 TLVLGLRRTGKSSIIKIGI 50
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 26.5 bits (57), Expect = 2.1
Identities = 3/19 (15%), Positives = 10/19 (52%)
Query: 11 VILCGEYGVGKSSLFRRYA 29
+++ G GK+ + ++
Sbjct: 5 IVMVGLPARGKTYISKKLT 23
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 26.4 bits (58), Expect = 2.1
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
S + + G G GKS++F
Sbjct: 22 SFEAQPNSIIAFAGPSGGGKSTIFS 46
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 26.7 bits (57), Expect = 2.1
Identities = 19/139 (13%), Positives = 36/139 (25%), Gaps = 5/139 (3%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQM 61
++ E ++ G+ G GKSSL + + D I +
Sbjct: 17 TVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGA---RDTYIDL 73
Query: 62 QLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHV--LSQHLLEIVTYAENAKIFL 119
G R+ Y E + + N S+ + + IFL
Sbjct: 74 IFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFL 133
Query: 120 CGNNEQCHNLISSTYKTSC 138
+ + +
Sbjct: 134 NAIYIRQGQIDAILESDEA 152
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 225
Score = 26.4 bits (57), Expect = 2.2
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 10 KVILCGEYGV--GKSSL---FRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLW 64
KVIL GE+ V GK +L + S+ K +L L N + D ++ QL
Sbjct: 13 KVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNVGIKQVWDVATL--QLL 70
Query: 65 DTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV 109
DTG +E+ + + + + + LS +
Sbjct: 71 DTGFLEQGDVPAPTLEQLEKLKKVAGLPRDCVGNEGLSLLAFLYL 115
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.5 bits (57), Expect = 2.3
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 6 VPEQKVILCGEYGVGKSSL 24
V L G GKS L
Sbjct: 27 VAGTVGALVSPGGAGKSML 45
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 26.3 bits (58), Expect = 2.3
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++K+P + V L G G GKS++
Sbjct: 35 NLKIPAGKTVALVGRSGSGKSTIAS 59
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 26.4 bits (58), Expect = 2.3
Identities = 6/25 (24%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++ + + + + + G G GKS+L +
Sbjct: 23 NLSIKQGEVIGIVGRSGSGKSTLTK 47
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 26.4 bits (57), Expect = 2.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 VILCGEYGVGKSSLFRRYA 29
V++ G+ G GKS+ R A
Sbjct: 31 VLVFGDRGTGKSTAVRALA 49
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.0 bits (57), Expect = 2.7
Identities = 6/25 (24%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
+ + + L G G GKS++
Sbjct: 34 TFTLRPGEVTALVGPNGSGKSTVAA 58
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 25.9 bits (55), Expect = 3.5
Identities = 10/118 (8%), Positives = 24/118 (20%), Gaps = 7/118 (5%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGGME 70
L G G GK+ R+ K + + +
Sbjct: 46 ATLLGRPGTGKTVTLRKLWELY-------KDKTTARFVYINGFIYRNFTAIIGEIARSLN 98
Query: 71 RVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIVTYAENAKIFLCGNNEQCHN 128
A ++ + ++ + + I L ++
Sbjct: 99 IPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGA 156
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.3 bits (54), Expect = 3.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 10 KVILCGEYGVGKSSLFRRYA 29
K +L G G GKS++ RR A
Sbjct: 3 KAVLVGLPGSGKSTIGRRLA 22
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 25.6 bits (56), Expect = 3.9
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 3 SIKVPEQKVI-LCGEYGVGKSSLFR 26
+KVP +++ L G G GK++
Sbjct: 26 DLKVPRGQIVTLIGANGAGKTTTLS 50
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 25.4 bits (55), Expect = 4.1
Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Query: 9 QKVILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTGG 68
+ + G GVGKSSL + S + + Q+ +D GG
Sbjct: 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEVSEK---LQRGRHTT---TTAQLLKFDFGG 149
Query: 69 M 69
Sbjct: 150 Y 150
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 25.3 bits (55), Expect = 5.0
Identities = 6/25 (24%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++ + + + + + G G GK+SL
Sbjct: 56 NLNIEKGEMLAITGSTGSGKTSLLM 80
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK)
{Streptococcus pneumoniae r6 [TaxId: 171101]}
Length = 194
Score = 25.2 bits (54), Expect = 5.2
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 1 MASIKVPEQKVILCGEYGV---GKSSL---FRRYAYDTFISSSSRKSTLGLDNFNKEYKV 54
M ++K K+ GEY + G+ +L Y S S + + +F + +
Sbjct: 1 MIAVKTC-GKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYSDMFDFAVDLRP 59
Query: 55 DD 56
+
Sbjct: 60 NP 61
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 24.9 bits (53), Expect = 5.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 11 VILCGEYGVGKSSLFRR 27
V+L G G GKS+L ++
Sbjct: 3 VVLSGPSGAGKSTLLKK 19
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 25.0 bits (53), Expect = 5.6
Identities = 25/166 (15%), Positives = 42/166 (25%), Gaps = 21/166 (12%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSS----------------SRKSTLGLD-----NFN 49
++ G G GK+ ++ Y+ I + G D +
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEG 88
Query: 50 KEYKVDDRSIQMQLWDTGGMERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEIV 109
K + +D GG + A I Y + S+D+ S +
Sbjct: 89 KLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVR 148
Query: 110 TYAENAKIFLCGNNEQCHNLISSTYKTSCKTGEGVEEMFADIGRQL 155
L + GVEE +D L
Sbjct: 149 RELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVIL 194
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 24.9 bits (54), Expect = 5.6
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 3 SIKVPEQKVI-LCGEYGVGKSSLFR 26
SI V + V + G G GKS+L
Sbjct: 24 SISVNKGDVTLIIGPNGSGKSTLIN 48
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 25.0 bits (54), Expect = 5.7
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
S+KV + ++ G G GK+
Sbjct: 20 SLKVESGEYFVILGPTGAGKTLFLE 44
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK
{Porphyromonas gingivalis [TaxId: 837]}
Length = 186
Score = 24.8 bits (54), Expect = 5.9
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 108 IVTYAENAKIFLCGNNEQCHNLISST 133
+ Y E+++I+ N + ISS
Sbjct: 84 VDMYLEHSRIWCFHNGGKEEVFISSA 109
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 24.9 bits (54), Expect = 6.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSL 24
++V V+L G G+GKS
Sbjct: 9 VLLEVFGVGVLLTGRSGIGKSEC 31
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 24.7 bits (52), Expect = 6.8
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 12 ILCGEYGVGKSSLFRRYA 29
++ G+G +L +
Sbjct: 28 LIQALPGMGDDALIYALS 45
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 24.9 bits (54), Expect = 7.0
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++ + E + V+ G G GKS+L R
Sbjct: 20 NLDIHEGEFVVFVGPSGCGKSTLLR 44
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 25.0 bits (54), Expect = 7.1
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 3 SIKVPEQKVI-LCGEYGVGKSSLFR 26
S ++ E ++ L G G GK++ R
Sbjct: 22 SFEIEEGEIFGLIGPNGAGKTTTLR 46
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 24.5 bits (52), Expect = 7.4
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 11 VILCGEYGVGKSSLFRR 27
+++ G G GKS+L ++
Sbjct: 4 IVISGPSGTGKSTLLKK 20
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 24.5 bits (52), Expect = 7.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTF 33
+L G+ G GK+SL +T
Sbjct: 35 FLLGGQPGSGKTSLRSAIFEETQ 57
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 24.6 bits (52), Expect = 8.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 11 VILCGEYGVGKSSLFRR 27
V+L G VGKS++ R
Sbjct: 5 VVLSGPSAVGKSTVVRC 21
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 24.4 bits (53), Expect = 8.2
Identities = 6/28 (21%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 3 SIKVPEQKVI-LCGEYGVGKSSLFRRYA 29
++ + E + + + G G GKS++
Sbjct: 25 NLNIKEGEFVSIMGPSGSGKSTMLNIIG 52
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 24.5 bits (53), Expect = 8.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSL 24
+ + V++ G+ GVGKS
Sbjct: 8 VLVDIYGLGVLITGDSGVGKSET 30
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 24.3 bits (52), Expect = 8.3
Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 8/125 (6%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTFISSSSRKSTLGLDNFNKEYKVDDRSI-QMQLWDTGGM 69
V L G+ G GK++L R + + T +EY + + I L+
Sbjct: 36 VYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTY---TLVEEYNIAGKMIYHFDLYRLADP 92
Query: 70 ERVASITSSYYKFAEAAILVFSLDNAASFHVLSQHLLEI-VTYAENA-KIFLCGNNEQCH 127
E + + Y ++ L+ + L + + + + Y ++A I L
Sbjct: 93 EELEFMGIRDYFNTDSICLIEWSEKGQGI--LPEADILVNIDYYDDARNIELIAQTNLGK 150
Query: 128 NLISS 132
N+IS+
Sbjct: 151 NIISA 155
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 24.4 bits (52), Expect = 9.2
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 11 VILCGEYGVGKSSLFRR 27
++L G +GVG+ +
Sbjct: 6 LVLLGAHGVGRRHIKNT 22
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 24.3 bits (52), Expect = 9.2
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
+I + ++ + G G GK++ R
Sbjct: 25 NINIENGERFGILGPSGAGKTTFMR 49
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 24.1 bits (52), Expect = 9.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 2 ASIKVPEQKVILCGEYGVGKSSL 24
+ V V++ G+ G+GKS
Sbjct: 9 VLVDVYGVGVLITGDSGIGKSET 31
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 24.5 bits (53), Expect = 9.3
Identities = 6/25 (24%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
++ + + V G G+GK++L +
Sbjct: 21 TMTIEKGNVVNFHGPNGIGKTTLLK 45
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 24.6 bits (53), Expect = 9.4
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 11 VILCGEYGVGKSSLFRRYAYDTF---ISSSSRKSTLGLDNFNKEYKVDDRSIQMQLWDTG 67
V + G Y GKS L + A + S+ + T G+ + + I + L DT
Sbjct: 35 VAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILV-LLDTE 93
Query: 68 GMERVASITSSYYKFAEAAILVFSL 92
G+ V + ++ I ++
Sbjct: 94 GLGDVEKGDNQN----DSWIFALAV 114
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 24.5 bits (53), Expect = 9.5
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 3 SIKVPE-QKVILCGEYGVGKSSLFR 26
S++V + + +IL G G GK++ R
Sbjct: 23 SLEVKDGEFMILLGPSGCGKTTTLR 47
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 24.4 bits (52), Expect = 9.8
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 10 KVILCGEYGVGKSSL 24
++ + G GKSS+
Sbjct: 28 QIAVVGGQSAGKSSV 42
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 24.4 bits (52), Expect = 9.8
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 10 KVILCGEYGVGKSSL 24
++++ G GKSS+
Sbjct: 26 QIVVVGSQSSGKSSV 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.377
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 644,064
Number of extensions: 26202
Number of successful extensions: 305
Number of sequences better than 10.0: 1
Number of HSP's gapped: 243
Number of HSP's successfully gapped: 140
Length of query: 189
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 109
Effective length of database: 1,309,196
Effective search space: 142702364
Effective search space used: 142702364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (24.0 bits)