BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17232
(313 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R613|SNX6_PONAB Sorting nexin-6 OS=Pongo abelii GN=SNX6 PE=2 SV=1
Length = 406
Score = 308 bits (788), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 184/246 (74%), Gaps = 5/246 (2%)
Query: 1 MMEGLVEESLNDDQLVSGKKSARSENIDL-NDNVLIVDISDALSEKEKVKFTVHTKKKEV 59
MMEGL + D L + ++ N+DL +D L VDISDALSE++KVKFTVHTK
Sbjct: 1 MMEGLDD---GPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKFTVHTKSSLP 57
Query: 60 YFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTM 119
F VVRQHEEF+WLHD F ENE YAGYIIPPAPPRPDFD+SREKLQKLGEGEG+M
Sbjct: 58 NFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSM 117
Query: 120 TKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRS 179
TKEEF KMKQELEAEYLA FKKTVAMHE+FL R+A HP+ R D FHVFL+YNQDLSVR
Sbjct: 118 TKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRG 177
Query: 180 KNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTF 239
KNK E LE F + K+ D V++S VKD +DFFE+E FL EYHN +K+A+ ++DRMT
Sbjct: 178 KNKKEKLEDFFKNMVKSADGVIVS-GVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 236
Query: 240 KRKDAA 245
K AA
Sbjct: 237 SHKSAA 242
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 244 AAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
AAK LLYRR R L DYENAN+ L++AR KNKDV
Sbjct: 305 AAKDLLYRRSRSLVDYENANKALDKARAKNKDV 337
>sp|Q9UNH7|SNX6_HUMAN Sorting nexin-6 OS=Homo sapiens GN=SNX6 PE=1 SV=1
Length = 406
Score = 308 bits (788), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 184/246 (74%), Gaps = 5/246 (2%)
Query: 1 MMEGLVEESLNDDQLVSGKKSARSENIDL-NDNVLIVDISDALSEKEKVKFTVHTKKKEV 59
MMEGL + D L + ++ N+DL +D L VDISDALSE++KVKFTVHTK
Sbjct: 1 MMEGLDD---GPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKFTVHTKSSLP 57
Query: 60 YFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTM 119
F VVRQHEEF+WLHD F ENE YAGYIIPPAPPRPDFD+SREKLQKLGEGEG+M
Sbjct: 58 NFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSM 117
Query: 120 TKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRS 179
TKEEF KMKQELEAEYLA FKKTVAMHE+FL R+A HP+ R D FHVFL+YNQDLSVR
Sbjct: 118 TKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVRG 177
Query: 180 KNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTF 239
KNK E LE F + K+ D V++S VKD +DFFE+E FL EYHN +K+A+ ++DRMT
Sbjct: 178 KNKKEKLEDFFKNMVKSADGVIVS-GVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 236
Query: 240 KRKDAA 245
K AA
Sbjct: 237 SHKSAA 242
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 244 AAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
AAK LLYRR R L DYENAN+ L++AR KNKDV
Sbjct: 305 AAKDLLYRRSRSLVDYENANKALDKARAKNKDV 337
>sp|Q6P8X1|SNX6_MOUSE Sorting nexin-6 OS=Mus musculus GN=Snx6 PE=1 SV=2
Length = 406
Score = 306 bits (785), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 184/246 (74%), Gaps = 5/246 (2%)
Query: 1 MMEGLVEESLNDDQLVSGKKSARSENIDL-NDNVLIVDISDALSEKEKVKFTVHTKKKEV 59
MMEGL + D L + ++ N+DL +D L VDISDALSE+++VKFTVHTK
Sbjct: 1 MMEGLDD---GPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDRVKFTVHTKSSLP 57
Query: 60 YFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTM 119
F VVRQHEEF+WLHD F ENE YAGYIIPPAPPRPDFD+SREKLQKLGEGEG+M
Sbjct: 58 NFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSM 117
Query: 120 TKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRS 179
TKEEF KMKQELEAEYLA FKKTVAMHE+FL R+A HP+ R D FHVFL+YNQDLSVR
Sbjct: 118 TKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRG 177
Query: 180 KNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTF 239
KNK E LE F + K+ D V++S VKD +DFFE+E FL EYHN +K+A+ ++DRMT
Sbjct: 178 KNKKEKLEDFFKNMVKSADGVIVS-GVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 236
Query: 240 KRKDAA 245
K AA
Sbjct: 237 SHKSAA 242
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 244 AAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
AAK LLYRR R L DYENAN+ L++AR KNKDV
Sbjct: 305 AAKDLLYRRSRSLVDYENANKALDKARAKNKDV 337
>sp|Q86XE0|SNX32_HUMAN Sorting nexin-32 OS=Homo sapiens GN=SNX32 PE=2 SV=1
Length = 403
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 174/244 (71%), Gaps = 17/244 (6%)
Query: 18 GKKSARSENIDL-NDNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
GK S S +DL D+ L V+ISDA+SE++KVKFTV TK +F VVRQHEEF+
Sbjct: 11 GKPSCAS--VDLQGDSSLQVEISDAVSERDKVKFTVQTKSCLPHFAQTEFSVVRQHEEFI 68
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
WLHD + ENE YAG IIPPAPPRPDF++SREKLQKLGEG+ ++T+EEF KMKQELEAEYL
Sbjct: 69 WLHDAYVENEEYAGLIIPPAPPRPDFEASREKLQKLGEGDSSVTREEFAKMKQELEAEYL 128
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKT 196
A FKKTVAMHE+FL RLA HP R DH F VFL+Y QDLSVR KN+ E+L GFL + K+
Sbjct: 129 AIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVFLEYGQDLSVRGKNRKELLGGFLRNIVKS 188
Query: 197 TDQVLLS--HTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAAKRLLYRRLR 254
D+ L++ +K+ +DFFE+E FL EYH +++A RADR+ R +
Sbjct: 189 ADEALITGMSGLKEVDDFFEHERTFLLEYHTRIRDACLRADRVM------------RAHK 236
Query: 255 CLAD 258
CLAD
Sbjct: 237 CLAD 240
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 244 AAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
AAK LLYRRLR LADYENAN+ L++ART+N++V
Sbjct: 302 AAKDLLYRRLRALADYENANKALDKARTRNREV 334
>sp|Q80ZJ7|SNX32_MOUSE Sorting nexin-32 OS=Mus musculus GN=Snx32 PE=2 SV=1
Length = 404
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/238 (57%), Positives = 170/238 (71%), Gaps = 15/238 (6%)
Query: 24 SENIDL-NDNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRF 82
S ++DL D+ L V+ISDA+SE++KVKFTV TK +F VVRQHEEF+WLHD +
Sbjct: 16 STSVDLQGDSPLQVEISDAVSERDKVKFTVQTKSGLPHFAQSEFSVVRQHEEFIWLHDTY 75
Query: 83 EENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKT 142
ENE YAG IIPPAPPRPDF++SREKLQKLGEG ++T+EEF KMKQELEAEYLA FKKT
Sbjct: 76 VENEEYAGLIIPPAPPRPDFEASREKLQKLGEGNSSITREEFSKMKQELEAEYLAIFKKT 135
Query: 143 VAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLL 202
VAMHE+FL RLA HP R DH F VFL+Y+QDLSVR KN+ E+L G L S ++ D+VL+
Sbjct: 136 VAMHEVFLQRLAAHPTLRRDHNFSVFLEYSQDLSVREKNRKEVLGGLLRSIVRSADEVLI 195
Query: 203 S--HTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAAKRLLYRRLRCLAD 258
+ +K+ +DFFE+E FL EYH +++ RADR+ K CLAD
Sbjct: 196 TGISGLKEVDDFFEHERTFLVEYHTRIRDTCQRADRVMHSHK------------CLAD 241
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 236 RMTFKRKDAAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
R + AAK LLYRRLR LADYENAN+ L++ART+N++V
Sbjct: 295 RYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREV 335
>sp|Q9D8U8|SNX5_MOUSE Sorting nexin-5 OS=Mus musculus GN=Snx5 PE=1 SV=1
Length = 404
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
Query: 23 RSENIDLN-DNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDR 81
RS ++DLN D L +DI DALSE++KVKFTVHTK F V RQHE+FVWLHD
Sbjct: 19 RSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLSTFQSPEFSVTRQHEDFVWLHDT 78
Query: 82 FEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKK 141
E YAG IIPPAP +PDFD REK+QKLGEGEG+MTKEEF KMKQELEAEYLA FKK
Sbjct: 79 LTETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKK 138
Query: 142 TVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVL 201
TV+ HE+FL RL+ HPV D FHVFL+Y+QDLSVR KN EM GF S K+ D+VL
Sbjct: 139 TVSTHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEVL 198
Query: 202 LSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAA 245
S VK+ +DFFE E NFL Y+N +K++ +AD+MT K+ A
Sbjct: 199 FS-GVKEVDDFFEQEKNFLINYYNRIKDSCAKADKMTRSHKNVA 241
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 243 DAAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
+AAK LLYRR + L DYEN+N+ L++AR K+KDV
Sbjct: 303 EAAKDLLYRRTKALIDYENSNKALDKARLKSKDV 336
>sp|B1H267|SNX5_RAT Sorting nexin-5 OS=Rattus norvegicus GN=Snx5 PE=1 SV=1
Length = 404
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
Query: 23 RSENIDLN-DNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDR 81
RS ++DLN D L +DI DALSE++KVKFTVHTK F V RQHE+FVWLHD
Sbjct: 19 RSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDT 78
Query: 82 FEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKK 141
E YAG IIPPAP +PDFD REK+QKLGEGEG+MTKEEF KMKQELEAEYLA FKK
Sbjct: 79 LTETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKK 138
Query: 142 TVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVL 201
TV+ HE+FL RL+ HPV D FHVFL+Y+QDLSVR KN EM GF S K+ D+VL
Sbjct: 139 TVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEVL 198
Query: 202 LSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAA 245
S VK+ +DFFE E NFL Y+N +K++ +AD+MT K+ A
Sbjct: 199 FS-GVKEVDDFFEQEKNFLINYYNRIKDSCAKADKMTRSHKNVA 241
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 243 DAAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
+AAK LLYRR + L DYEN+N+ L++AR K+KDV
Sbjct: 303 EAAKDLLYRRTKALIDYENSNKALDKARLKSKDV 336
>sp|Q3ZBM5|SNX5_BOVIN Sorting nexin-5 OS=Bos taurus GN=SNX5 PE=2 SV=1
Length = 404
Score = 268 bits (684), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 160/224 (71%), Gaps = 2/224 (0%)
Query: 23 RSENIDLN-DNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDR 81
RS ++DLN D L +DI DALSE++KVKFTVHTK F V RQHE+FVWLHD
Sbjct: 19 RSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDT 78
Query: 82 FEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKK 141
E YAG IIPPAP +PDFD REK+QKLGEGEG+MTKEEF KMKQELEAEYLA FKK
Sbjct: 79 LIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKK 138
Query: 142 TVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVL 201
TV+ HE+FL RL+ HPV D FHVFL+Y+QDLSVR KN EM GF S K+ D+VL
Sbjct: 139 TVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEVL 198
Query: 202 LSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAA 245
S VK+ +DFFE E FL Y+N +K++ +ADRMT K+ A
Sbjct: 199 FS-GVKEVDDFFEQEKTFLINYYNRIKDSCAKADRMTRSHKNVA 241
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 243 DAAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
+AAK LLYRR + L DYEN+N+ L++AR K++DV
Sbjct: 303 EAAKDLLYRRTKALIDYENSNKALDKARLKSRDV 336
>sp|Q9Y5X3|SNX5_HUMAN Sorting nexin-5 OS=Homo sapiens GN=SNX5 PE=1 SV=1
Length = 404
Score = 267 bits (683), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/224 (60%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
Query: 23 RSENIDLN-DNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDR 81
RS ++DLN D L +DI DALSE++KVKFTVHTK F V RQHE+FVWLHD
Sbjct: 19 RSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDT 78
Query: 82 FEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKK 141
E YAG IIPPAP +PDFD REK+QKLGEGEG+MTKEEF KMKQELEAEYLA FKK
Sbjct: 79 LIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKK 138
Query: 142 TVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVL 201
TV+ HE+FL RL+ HPV D FHVFL+Y+QDLSVR KN EM GF S K+ D+VL
Sbjct: 139 TVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEVL 198
Query: 202 LSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAA 245
+ VK+ +DFFE E NFL Y+N +K++ +AD+MT K+ A
Sbjct: 199 FT-GVKEVDDFFEQEKNFLINYYNRIKDSCVKADKMTRSHKNVA 241
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 243 DAAKRLLYRRLRCLADYENANRNLERARTKNKDV 276
+AAK LLYRR + L DYEN+N+ L++AR K+KDV
Sbjct: 303 EAAKDLLYRRTKALIDYENSNKALDKARLKSKDV 336
>sp|Q9FG38|SNX1_ARATH Sorting nexin 1 OS=Arabidopsis thaliana GN=SNX1 PE=1 SV=1
Length = 402
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 38/192 (19%)
Query: 67 IVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIK 126
IV+R++ +FVWL DR E Y G IPP P + S+ EK + EFI+
Sbjct: 63 IVIRRYSDFVWLRDRL--FEKYKGIFIPPLPEK----SAVEKFR---------FSAEFIE 107
Query: 127 MKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVR-------- 178
M++ A ++F+ R+A HP + FLQ +++ R
Sbjct: 108 MRR--------------AALDIFVNRIALHPELQQSEDLRTFLQADEETMDRFRFQETSI 153
Query: 179 SKNKMEMLEGFLNSFSKTTDQVLLSH-TVKDHNDFFENENNFLHEYHNHLKEATTRADRM 237
K ++++ F + SK +D VL V++ +E +++ E NHL EA A R+
Sbjct: 154 FKKPADLMQMFRDVQSKVSDAVLGKEKPVEETTADYEKLKHYIFELENHLTEAQKHAYRL 213
Query: 238 TFKRKDAAKRLL 249
+ ++ + LL
Sbjct: 214 VKRHRELGQSLL 225
>sp|Q9CY18|SNX7_MOUSE Sorting nexin-7 OS=Mus musculus GN=Snx7 PE=2 SV=1
Length = 387
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 61/217 (28%)
Query: 28 DLNDNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYRTVI-------------VVRQHEE 74
DL D + VD ++ H E + YR V V R++++
Sbjct: 28 DLKDLFITVDAPES-----------HVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQD 76
Query: 75 FVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFI--KMKQELE 132
F+WL + EE A+ IIPP P E+FI M +
Sbjct: 77 FLWLKGKLEE--AHPTLIIPPLP------------------------EKFIVKGMVERFN 110
Query: 133 AEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYN-QDLSVRSKNKMEMLEGFLN 191
+++ T +K A+H+ FL R+A HP + F VFL ++LS K G L+
Sbjct: 111 DDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKVFLTAQAEELSSYKKQG----PGLLS 163
Query: 192 SFSKTTDQVLLS-HTVKDHNDFFENENNFLHEYHNHL 227
+T V S VK+ + F NNF+ + +
Sbjct: 164 RMGQTVRAVASSMRGVKNRPEEFMEMNNFIETFSQKI 200
>sp|P0C220|SNX2_MACFA Sorting nexin-2 OS=Macaca fascicularis GN=SNX2 PE=2 SV=1
Length = 523
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 31/229 (13%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV--------KFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
E I+ N I DI +S+ EKV + V TK F V R+ +F+
Sbjct: 129 EEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFL 188
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
LH + + GYI+PPAP + S + K+ G+ + EF++ ++
Sbjct: 189 GLHSKLASKYLHVGYIVPPAP-----EKSIVGMTKVKVGKEDSSSTEFVEKRR------- 236
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEML-EGFLNSFSK 195
A E +L R +HP D FL+ ++ R+ N + G L +K
Sbjct: 237 -------AALERYLQRTVKHPTLLQDPDLRQFLESSE--LPRAVNTQALSGAGILRMVNK 287
Query: 196 TTDQV-LLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKD 243
D V ++ + + + +FE + L++ + + RK+
Sbjct: 288 AADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKE 336
>sp|O60749|SNX2_HUMAN Sorting nexin-2 OS=Homo sapiens GN=SNX2 PE=1 SV=2
Length = 519
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 31/229 (13%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV--------KFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
E I+ N I DI +S+ EKV + V TK F V R+ +F+
Sbjct: 129 EEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFL 188
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
LH + + GYI+PPAP + S + K+ G+ + EF++ ++
Sbjct: 189 GLHSKLASKYLHVGYIVPPAP-----EKSIVGMTKVKVGKEDSSSTEFVEKRR------- 236
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEML-EGFLNSFSK 195
A E +L R +HP D FL+ ++ R+ N + G L +K
Sbjct: 237 -------AALERYLQRTVKHPTLLQDPDLRQFLESSE--LPRAVNTQALSGAGILRMVNK 287
Query: 196 TTDQV-LLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKD 243
D V ++ + + + +FE + L++ + + RK+
Sbjct: 288 AADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKE 336
>sp|Q5R9A9|SNX2_PONAB Sorting nexin-2 OS=Pongo abelii GN=SNX2 PE=2 SV=1
Length = 523
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 31/229 (13%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV--------KFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
E I+ N I DI +S+ EKV + V TK F V R+ +F+
Sbjct: 129 EEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFL 188
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
LH + + GYI+PPAP + S + K+ G+ + EF++ ++
Sbjct: 189 GLHSKLASKYLHVGYIVPPAP-----EKSIVGMTKVKVGKEDSSSTEFVEKRR------- 236
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEML-EGFLNSFSK 195
A E +L R +HP D FL+ ++ R+ N + G L +K
Sbjct: 237 -------AALERYLQRTVKHPTLLQDPDLRQFLESSE--LPRAVNTQALSGAGILRMVNK 287
Query: 196 TTDQV-LLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKD 243
D V ++ + + + +FE + L++ + + RK+
Sbjct: 288 AADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKE 336
>sp|Q4R5U9|SNX7_MACFA Sorting nexin-7 OS=Macaca fascicularis GN=SNX7 PE=2 SV=1
Length = 387
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 50/192 (26%)
Query: 53 HTKKKEVYFLYRTVI-------------VVRQHEEFVWLHDRFEENEAYAGYIIPPAPPR 99
H E + YR + V R++++F+WL + EE A+ IIPP P
Sbjct: 42 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE--AHPTLIIPPLP-- 97
Query: 100 PDFDSSREKLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHP 157
E+FI M + +++ T +K A+H+ FL R+A HP
Sbjct: 98 ----------------------EKFIVKGMVERFNDDFIETRRK--ALHK-FLNRIADHP 132
Query: 158 VFRLDHQFHVFLQYNQ-DLSVRSKNKMEMLEGFLNSFSKTTDQVLLS-HTVKDHNDFFEN 215
+ F +FL +LS K G L+ +T V S VK+ + F
Sbjct: 133 TLTFNEDFKIFLTAQAWELSSHKKQG----PGLLSRMGQTVRAVASSMRGVKNRPEEFME 188
Query: 216 ENNFLHEYHNHL 227
NNF+ + +
Sbjct: 189 MNNFIELFSQKI 200
>sp|Q9WV80|SNX1_MOUSE Sorting nexin-1 OS=Mus musculus GN=Snx1 PE=1 SV=1
Length = 522
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F R V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E +L R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYLQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G L F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQALSGAGLLKMFNKATDAV 295
>sp|B9DFS6|SNX2B_ARATH Sorting nexin 2B OS=Arabidopsis thaliana GN=SNX2B PE=1 SV=1
Length = 572
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 30/123 (24%)
Query: 68 VVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKM 127
V R+ + V L DR E +Y G+ IPP P + +S M K+EF++
Sbjct: 187 VRRRFRDIVTLADRLAE--SYRGFCIPPRPDKSIVESQ------------VMQKQEFVEQ 232
Query: 128 KQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKM--EM 185
++ VA+ E +L RL HPV R + VFLQ L + + + M
Sbjct: 233 RR-------------VAL-EKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRM 278
Query: 186 LEG 188
L+G
Sbjct: 279 LDG 281
>sp|Q99N27|SNX1_RAT Sorting nexin-1 OS=Rattus norvegicus GN=Snx1 PE=1 SV=1
Length = 522
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F R V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E +L R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYLQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G L F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQALSGAGLLKMFNKATDAV 295
>sp|Q9UNH6|SNX7_HUMAN Sorting nexin-7 OS=Homo sapiens GN=SNX7 PE=1 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 50/192 (26%)
Query: 53 HTKKKEVYFLYRTVI-------------VVRQHEEFVWLHDRFEENEAYAGYIIPPAPPR 99
H E + YR + V R++++F+WL + EE A+ IIPP P
Sbjct: 42 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE--AHPTLIIPPLP-- 97
Query: 100 PDFDSSREKLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHP 157
E+FI M + +++ T +K A+H+ FL R+A HP
Sbjct: 98 ----------------------EKFIVKGMVERFNDDFIETRRK--ALHK-FLNRIADHP 132
Query: 158 VFRLDHQFHVFLQYNQ-DLSVRSKNKMEMLEGFLNSFSKTTDQVLLS-HTVKDHNDFFEN 215
+ F +FL +LS K G L+ +T V S VK+ + F
Sbjct: 133 TLTFNEDFKIFLTAQAWELSSHKKQG----PGLLSRMGQTVRAVASSMRGVKNRPEEFME 188
Query: 216 ENNFLHEYHNHL 227
NNF+ + +
Sbjct: 189 MNNFIELFSQKI 200
>sp|Q9CWK8|SNX2_MOUSE Sorting nexin-2 OS=Mus musculus GN=Snx2 PE=1 SV=2
Length = 519
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 31/229 (13%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV--------KFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
+ I+ N I DI +S+ EKV + V TK F V R+ +F+
Sbjct: 129 DEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFL 188
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
LH + + GYI+PPAP + S + K+ G+ + EF++ ++
Sbjct: 189 GLHSKLASKYLHVGYIVPPAP-----EKSIVGMTKVKVGKEDSSSTEFVEKRR------- 236
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSVRSKNKMEML-EGFLNSFSK 195
A E +L R +HP D FL+ ++ R+ N + G L +K
Sbjct: 237 -------AALERYLQRTVKHPTLLQDPDLRQFLESSE--LPRAVNTQALSGAGILRMVNK 287
Query: 196 TTDQV-LLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKD 243
D V ++ + + + +FE + L++ + + RK+
Sbjct: 288 AADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKE 336
>sp|Q2TBW7|SNX2_BOVIN Sorting nexin-2 OS=Bos taurus GN=SNX2 PE=2 SV=1
Length = 519
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 27/157 (17%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV--------KFTVHTKKKEVYFLYRTVIVVRQHEEFV 76
+ I+ N + DI +S+ EKV + V TK F V R+ +F+
Sbjct: 129 DEIEEEANGDVFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFL 188
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYL 136
LH + + GYI+PPAP + S + K+ G+ + EF++ ++
Sbjct: 189 GLHSKLASKYLHVGYIVPPAP-----EKSIVGMTKVKVGKEDSSSTEFVEKRR------- 236
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQ 173
A E +L R +HP D FL+ ++
Sbjct: 237 -------AALERYLQRTVKHPTLLQDPDLRQFLESSE 266
>sp|Q4V7P7|SNX30_XENLA Sorting nexin-30 OS=Xenopus laevis GN=snx30 PE=2 SV=1
Length = 452
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
+ ++V TK F V R++++F WL ++ EE + + IPP P
Sbjct: 124 ITYSVSTKTTRTEFDLPEYSVRRRYQDFDWLRNKLEETQP--THFIPPLP---------- 171
Query: 108 KLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
E+F+ + E++ T +K + + FL R+A HPV + F
Sbjct: 172 --------------EKFVVKGVVDRFSEEFVETRRKAL---DKFLKRIADHPVLSFNEHF 214
Query: 166 HVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLLSH------TVKDHNDFF 213
+VFL +DL+ K + +L S T L + TV D+ D F
Sbjct: 215 NVFLT-AKDLNSHKKQGVTLLSKMGESVRYVTSGYKLRNRPAEFATVTDYLDTF 267
>sp|Q13596|SNX1_HUMAN Sorting nexin-1 OS=Homo sapiens GN=SNX1 PE=1 SV=3
Length = 522
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F + V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E +L R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYLQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G L F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQTLSGAGLLKMFNKATDAV 295
>sp|Q8L5Z7|SNX2A_ARATH Sorting nexin 2A OS=Arabidopsis thaliana GN=SNX2A PE=1 SV=1
Length = 587
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 68 VVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKM 127
V R+ + V L DR E Y G+ IPP P + +S M K+EF++
Sbjct: 198 VRRRFRDVVTLADRLAE--TYRGFCIPPRPDKSVVESQ------------VMQKQEFVEQ 243
Query: 128 KQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQYNQDLSV 177
++ VA+ E +L RL+ HPV R + VFLQ L +
Sbjct: 244 RR-------------VAL-EKYLRRLSAHPVIRNSDELKVFLQVQGKLPL 279
>sp|Q4R503|SNX1_MACFA Sorting nexin-1 OS=Macaca fascicularis GN=SNX1 PE=2 SV=1
Length = 522
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F + V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E +L R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYLQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G L F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQTLSGAGLLKMFNKATDAV 295
>sp|Q05B62|SNX1_BOVIN Sorting nexin-1 OS=Bos taurus GN=SNX1 PE=2 SV=1
Length = 522
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F + V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPMFRSKHFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E +L R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYLQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G L F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQTLSGAGLLKMFNKATDAV 295
>sp|Q8CE50|SNX30_MOUSE Sorting nexin-30 OS=Mus musculus GN=Snx30 PE=2 SV=1
Length = 437
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 32/141 (22%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
+ + + TK V F V R++++F WL ++ EE++ ++IPP P
Sbjct: 109 ITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRNKLEESQPT--HLIPPLP---------- 156
Query: 108 KLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
E+F+ + E++ T +K + + FL R+ HPV + F
Sbjct: 157 --------------EKFVVKGVVDRFSEEFVETRRKAL---DKFLKRITDHPVLSFNEHF 199
Query: 166 HVFLQYNQDLSVRSKNKMEML 186
+VFL +DL+ K + +L
Sbjct: 200 NVFLT-AKDLNAYKKQGIALL 219
>sp|Q28E02|SNX30_XENTR Sorting nexin-30 OS=Xenopus tropicalis GN=snx30 PE=2 SV=1
Length = 446
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
+ + V TK F + R++++F WL ++ EE + + IPP P
Sbjct: 118 ITYRVSTKTTRTEFDLPEYSIRRRYQDFDWLRNKLEETQP--THFIPPLP---------- 165
Query: 108 KLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
E+F+ + E++ T +K + + FL R+A HPV + F
Sbjct: 166 --------------EKFVVKGVVDRFSEEFVETRRKAL---DKFLKRIADHPVLSFNEHF 208
Query: 166 HVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLLSH------TVKDHNDFFE 214
+VFL +DL+ K + +L S T L + T+ D+ D F+
Sbjct: 209 NVFLT-AKDLNSHKKQGITLLSKMGESVRYVTSGYKLRNRPVEFATITDYLDTFQ 262
>sp|Q5VWJ9|SNX30_HUMAN Sorting nexin-30 OS=Homo sapiens GN=SNX30 PE=1 SV=1
Length = 437
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 32/141 (22%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
+ + + TK V F V R++++F WL + EE++ ++IPP P
Sbjct: 109 ITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPT--HLIPPLP---------- 156
Query: 108 KLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
E+F+ + E++ T +K + + FL R+ HPV + F
Sbjct: 157 --------------EKFVVKGVVDRFSEEFVETRRKAL---DKFLKRITDHPVLSFNEHF 199
Query: 166 HVFLQYNQDLSVRSKNKMEML 186
++FL +DL+ K + +L
Sbjct: 200 NIFLT-AKDLNAYKKQGIALL 219
>sp|Q5RFP8|SNX1_PONAB Sorting nexin-1 OS=Pongo abelii GN=SNX1 PE=2 SV=1
Length = 522
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V + V T+ F + V R+ +F+ L+++ E + G+I+PP P + S
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP-----EKSLI 217
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
+ K+ G+ + EF++ ++ A E ++ R+ HP D
Sbjct: 218 GMTKVKVGKEDSSSAEFLEKRR--------------AALERYIQRIVNHPTMLQDPDVRE 263
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQV 200
FL+ ++L + G F+K TD V
Sbjct: 264 FLE-KEELPRAVGTQTLSGAGLPKMFNKATDAV 295
>sp|P0CR58|MVP1_CRYNJ Sorting nexin MVP1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=MVP1 PE=3
SV=1
Length = 612
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 43/135 (31%)
Query: 44 EKEKVKFTVHTKKKEVYFLYRTVI---------VVRQHEEFVWLHDRFEENEAYAGYIIP 94
++E++ T+ +KE +FL + I V R++ +FVWL D E+ Y I+P
Sbjct: 228 DQERIVVTL-IPEKEGWFLQKYRIESDKRGEGPVARRYSDFVWLMDVLEKR--YPFRILP 284
Query: 95 PAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLA 154
P PP+ SS LEA LA + L+ L
Sbjct: 285 PLPPKRINPSS-----------------------AFLEARRLALIR--------LLSFLT 313
Query: 155 QHPVFRLDHQFHVFL 169
HPV R D ++FL
Sbjct: 314 AHPVLRTDACLNIFL 328
>sp|P0CR59|MVP1_CRYNB Sorting nexin MVP1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=MVP1 PE=3 SV=1
Length = 612
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 43/135 (31%)
Query: 44 EKEKVKFTVHTKKKEVYFLYRTVI---------VVRQHEEFVWLHDRFEENEAYAGYIIP 94
++E++ T+ +KE +FL + I V R++ +FVWL D E+ Y I+P
Sbjct: 228 DQERIVVTL-IPEKEGWFLQKYRIESDKRGEGPVARRYSDFVWLMDVLEKR--YPFRILP 284
Query: 95 PAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLA 154
P PP+ SS LEA LA + L+ L
Sbjct: 285 PLPPKRINPSS-----------------------AFLEARRLALIR--------LLSFLT 313
Query: 155 QHPVFRLDHQFHVFL 169
HPV R D ++FL
Sbjct: 314 AHPVLRTDACLNIFL 328
>sp|Q91WL6|SNX11_MOUSE Sorting nexin-11 OS=Mus musculus GN=Snx11 PE=2 SV=1
Length = 271
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 43/154 (27%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKV-------KFTVHTKKKEVYFLYRTVIVVRQHEEFVW 77
EN DL + V+ V + D + E K +HT K F +T V R++ EFVW
Sbjct: 9 ENQDLEE-VITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKA--FTAKTSCVRRRYREFVW 65
Query: 78 LHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFI-KMKQELEAEYL 136
L + + N AG + P P P G+ +EFI K +Q L+
Sbjct: 66 LRKQLQRN---AGLV--PVPELP------------GKSTFFGGSDEFIEKRRQGLQ---- 104
Query: 137 ATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQ 170
FL ++ Q V D Q H+FLQ
Sbjct: 105 -----------HFLEKVLQSVVLLSDSQLHLFLQ 127
>sp|Q9C0U7|VPS5_SCHPO Vacuolar protein sorting-associated protein vps5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps5 PE=1 SV=1
Length = 576
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 31/105 (29%)
Query: 66 VIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFI 125
V V R++ +F +L+ N + G IIPP P + Q +G + +EFI
Sbjct: 239 VTVQRRYNDFAFLYQLLSNN--HPGCIIPPIPEK----------QVVGRFD-----DEFI 281
Query: 126 KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQ 170
+ ++ A E+ L +++ HPV R D+ F +FL+
Sbjct: 282 EQRR--------------AALEVMLRKISAHPVLRDDYSFKLFLE 312
>sp|Q9Y5W9|SNX11_HUMAN Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=2 SV=2
Length = 270
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 35/123 (28%)
Query: 49 KFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREK 108
K +HT K F +T V R++ EFVWL + + N AG + P P P
Sbjct: 39 KIFLHTNSKA--FTAKTSCVRRRYREFVWLRKQLQRN---AGLV--PVPELP-------- 83
Query: 109 LQKLGEGEGTMTKEEFI-KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
G+ T +EFI K +Q L + FL ++ Q V D Q H+
Sbjct: 84 ----GKSTFFGTSDEFIEKRRQGL---------------QHFLEKVLQSVVLLSDSQLHL 124
Query: 168 FLQ 170
FLQ
Sbjct: 125 FLQ 127
>sp|Q566W7|SNX30_DANRE Sorting nexin-30 OS=Danio rerio GN=snx30 PE=2 SV=1
Length = 430
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
+ + V TK F V R++++F WL + E+++ ++IPP P
Sbjct: 100 ITYRVCTKTTRTEFDLPEYSVRRRYQDFDWLRIKLEDSQP--THLIPPLP---------- 147
Query: 108 KLQKLGEGEGTMTKEEFI--KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
E+F+ + E++ T +K + + FL R+A HPV + F
Sbjct: 148 --------------EKFVMKGVVDRFSEEFVETRRKAL---DKFLKRVADHPVLSFNEHF 190
Query: 166 HVFLQYNQDLSVR 178
+ FL +DL+ R
Sbjct: 191 NAFLS-AKDLNKR 202
>sp|Q92331|VPS5_YEAST Vacuolar protein sorting-associated protein 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS5 PE=1
SV=1
Length = 675
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 49/167 (29%)
Query: 48 VKFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSRE 107
V++TV ++ + Y V R++ +F WL+ + + N + G +IPP P +
Sbjct: 299 VEYTVISESSLLELKY--AQVSRRYRDFRWLYRQLQNN--HWGKVIPPPPEK-------- 346
Query: 108 KLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV 167
Q +G KE FI+ ++ E L ++ Q PV + D F +
Sbjct: 347 --QSVGS-----FKENFIENRR--------------FQMESMLKKICQDPVLQKDKDFLL 385
Query: 168 FLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFE 214
FL + D S SK + FL S + D ND E
Sbjct: 386 FLTSD-DFSSESKKR-----AFLTG----------SGAINDSNDLSE 416
>sp|B2THC8|ADDA_CLOBB ATP-dependent helicase/nuclease subunit A OS=Clostridium botulinum
(strain Eklund 17B / Type B) GN=addA PE=3 SV=1
Length = 1243
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 169 LQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFENENNFLHEYHNHLK 228
L+ ++ L + N+ L+G ++ F K D+++L + D+ ENE F +Y N L
Sbjct: 1157 LEIDESLPQKYANEKIRLQGIIDCFFKCDDEIIL---LDYKTDYVENEEEFKDKYKNQLS 1213
Query: 229 EATTRADRMTFKRKDAAKRLLY 250
+ +MT K+ D K+ LY
Sbjct: 1214 YYSEAIFKMTGKKVD--KKYLY 1233
>sp|Q08DD7|SNX11_BOVIN Sorting nexin-11 OS=Bos taurus GN=SNX11 PE=2 SV=1
Length = 270
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 39/125 (31%)
Query: 49 KFTVHTKKKEVYFLYRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREK 108
K +HT K F +T V R++ EFVWL + + N AG + P P P
Sbjct: 39 KIFLHTNSKA--FTAKTSCVRRRYREFVWLRKQLQRN---AGLV--PVPELP-------- 83
Query: 109 LQKLGEGEGTM--TKEEFI-KMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQF 165
G+ T + +EFI K +Q L+ FL ++ Q V D Q
Sbjct: 84 ------GKSTFFGSSDEFIEKRRQGLQ---------------HFLEKVLQSVVLLSDSQL 122
Query: 166 HVFLQ 170
H+FLQ
Sbjct: 123 HLFLQ 127
>sp|Q75C43|SNX4_ASHGO Sorting nexin-4 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51
/ FGSC 9923 / NRRL Y-1056) GN=SNX4 PE=3 SV=1
Length = 410
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 52/148 (35%), Gaps = 47/148 (31%)
Query: 66 VIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFI 125
+V R++ +FV L+ + Y I+PP P + +
Sbjct: 53 TVVHRRYSDFVLLYQILAND--YPACIVPPLPDKKVLN---------------------- 88
Query: 126 KMKQELEAEYLATFKKTVA---MHEM--FLTRLAQHPVFRLDHQFHVFL------QYNQD 174
YL F ++ H + FL RLAQHPV H FL Y +
Sbjct: 89 ---------YLDRFSQSFTQKRCHSLQNFLQRLAQHPVLSQSKILHTFLVSSDWDAYQKS 139
Query: 175 LSVRS---KNKMEMLEGFLNSFSKTTDQ 199
L+ NK E+ E +N+F Q
Sbjct: 140 LAETVGNLSNKEELTETIMNAFKSVHSQ 167
>sp|B2UX57|ADDA_CLOBA ATP-dependent helicase/nuclease subunit A OS=Clostridium botulinum
(strain Alaska E43 / Type E3) GN=addA PE=3 SV=1
Length = 1244
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 77 WLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEY- 135
+L ++ + A G I A + DF S L+++ E + +EEFI L+ EY
Sbjct: 1063 FLQEKKGISSAERGTAIHFAMKKIDF-SKVGTLKEIKEQLNKLYEEEFI-----LQEEYS 1116
Query: 136 ------LATFKKTVAMHEMFLTRLAQHPVFRLDHQFHV---FLQYNQDLSVRSKNKMEML 186
+ +F K+ +M ++R + FH L+ ++ L + N+ L
Sbjct: 1117 SINPYKILSFFKSNLGKKMLDVYNKGGKIYR-EIPFHTEISSLELDESLPQKYANEKIRL 1175
Query: 187 EGFLNSFSKTTDQVLLSHTVKDHNDFFENENNFLHEYHNHLKEATTRADRMTFKRKDAAK 246
+G ++ F K D+++L + D+ ENE F +Y + L + +MT K+ K
Sbjct: 1176 QGIIDCFFKCDDEIIL---LDYKTDYVENEEEFKEKYKSQLLYYSEAVFKMTGKK--VNK 1230
Query: 247 RLLY 250
R LY
Sbjct: 1231 RYLY 1234
>sp|Q9UMY4|SNX12_HUMAN Sorting nexin-12 OS=Homo sapiens GN=SNX12 PE=1 SV=3
Length = 172
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 33/168 (19%)
Query: 13 DQLVSGKKSARSENIDLND------NVLIVDISDALSEK-EKVKFT---VHTKKKEVYFL 62
D V+ + S+ DL D N L +DI + + + +FT V + F
Sbjct: 3 DTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFK 62
Query: 63 YRTVIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKE 122
+ V R++ +F WL + E + + ++PP P K Q G+ + +E
Sbjct: 63 LKESCVRRRYSDFEWLKNELERD---SKIVVPPLP------GKALKRQLPFRGDEGIFEE 113
Query: 123 EFIKMKQELEAEYLATFKKTVAMHEMFLTRLAQHPVFRLDHQFHVFLQ 170
FI+ +++ E F+ ++A HP+ + + H+FLQ
Sbjct: 114 SFIEERRQ--------------GLEQFINKIAGHPLAQNERCLHMFLQ 147
>sp|Q5H7C3|SNX4_PICPA Sorting nexin-4 OS=Komagataella pastoris GN=SNX4 PE=3 SV=1
Length = 661
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 24/79 (30%)
Query: 92 IIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKTVAMHEMFLT 151
IIPP P + Q+L E+IK + EY T K+++A++ FL
Sbjct: 139 IIPPLPNK----------QRL----------EYIKGDRF--GEYFTT-KRSIALNN-FLN 174
Query: 152 RLAQHPVFRLDHQFHVFLQ 170
R+++HP+ + +H+FL+
Sbjct: 175 RISKHPLLKQAKIYHIFLE 193
>sp|Q6FPT9|SNX4_CANGA Sorting nexin-4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SNX4 PE=3 SV=1
Length = 430
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 38/163 (23%)
Query: 66 VIVVRQHEEFVWLHDRFEENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFI 125
++V R++ + V LHD + + IIPP P +
Sbjct: 78 IVVHRRYNDVVLLHDILQNDHPTC--IIPPLPDK-------------------------- 109
Query: 126 KMKQELEAEYLATFKKTVAMHEM--FLTRLAQHPVFRLDHQFHVFL------QYNQDL-- 175
K+ Q + + H + FL R++QHP+ +FL Y +++
Sbjct: 110 KVLQYIAGDRFGRRFTQRRCHSLQNFLRRVSQHPILSTSKVLEIFLVGNEWDTYRKNIAG 169
Query: 176 SVRSKNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDFFENENN 218
++++ K ++ + +N+F K +Q ++D +D +N N
Sbjct: 170 TLQNAQKEDVTDAVMNAFKKVHNQNEEFTEIRDRSDKLDNSVN 212
>sp|P0CR65|SNX41_CRYNB Sorting nexin-41 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=SNX41 PE=3 SV=1
Length = 638
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 61/247 (24%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYR--TVIVVRQHEEFVWLHDRF 82
++I + V IVD +K T + ++ R T V R++ F+ LH
Sbjct: 79 KDISAGEQVHIVD---------ALKTTEGGTASYITYVIRLGTHTVRRRYSAFLSLHQSL 129
Query: 83 EENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKT 142
Y IIPP P S++ L + +E+ A +A K+
Sbjct: 130 --TGLYPVLIIPPIP-------SKQSLTDYAVKGQSKARED---------ATIIARRKRL 171
Query: 143 VAMHEMFLTRLAQHPVFRLDHQFHVFLQ---------YNQDLSVRSKNKMEMLEGFLNSF 193
+ E FL RL +HP+ +H H FL+ ++ +S+ SKN + +F
Sbjct: 172 L---EDFLQRLIRHPILGGEHVLHRFLEEDVSWSEVLHSPPISLLSKNPLHA-PSHNPTF 227
Query: 194 SKTTDQV--------------LL-----SHTVKDHNDFFENENNFLHEYHNHLKEATTRA 234
TT LL SH ++ + F + F ++ +H +
Sbjct: 228 QPTTPTSPSEAPATTSYIAHHLLPTPSPSHPLRQPDQRFMDSEAFTEKFQSHFSGTMEKV 287
Query: 235 DRMTFKR 241
+R KR
Sbjct: 288 NRRVTKR 294
>sp|P0CR64|SNX41_CRYNJ Sorting nexin-41 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=SNX41 PE=3
SV=1
Length = 638
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 61/247 (24%)
Query: 25 ENIDLNDNVLIVDISDALSEKEKVKFTVHTKKKEVYFLYR--TVIVVRQHEEFVWLHDRF 82
++I + V IVD +K T + ++ R T V R++ F+ LH
Sbjct: 79 KDISAGEQVHIVD---------ALKTTEGGTASYITYVIRLGTHTVRRRYSAFLSLHQSL 129
Query: 83 EENEAYAGYIIPPAPPRPDFDSSREKLQKLGEGEGTMTKEEFIKMKQELEAEYLATFKKT 142
Y IIPP P S++ L + +E+ A +A K+
Sbjct: 130 --TGLYPVLIIPPIP-------SKQSLTDYAVKGQSKARED---------ATIIARRKRL 171
Query: 143 VAMHEMFLTRLAQHPVFRLDHQFHVFLQ---------YNQDLSVRSKNKMEMLEGFLNSF 193
+ E FL RL +HP+ +H H FL+ ++ +S+ SKN + +F
Sbjct: 172 L---EDFLQRLIRHPILGGEHVLHRFLEEDVSWSEVLHSPPISLLSKNPLHA-PSHNPTF 227
Query: 194 SKTTDQV--------------LL-----SHTVKDHNDFFENENNFLHEYHNHLKEATTRA 234
TT LL SH ++ + F + F ++ +H +
Sbjct: 228 QPTTPTSPSEAPATTSYIAHHLLPTPSPSHPLRQPDQRFMDSEAFTEKFQSHFSGTMEKV 287
Query: 235 DRMTFKR 241
+R KR
Sbjct: 288 NRRVTKR 294
>sp|P49221|TGM4_HUMAN Protein-glutamine gamma-glutamyltransferase 4 OS=Homo sapiens
GN=TGM4 PE=1 SV=2
Length = 684
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 157 PVFRLDHQFHVFLQYNQDLSVRSKNKMEMLEGFLNSFSKTTDQVLLSHTVKDHNDF---F 213
PVFR FH+ L NQ L + K+E G S +K T VL T DH ++
Sbjct: 34 PVFRRGQVFHLRLVLNQPLQSYHQLKLEFSTGPNPSIAKHTLVVLDPRTPSDHYNWQATL 93
Query: 214 ENENN 218
+NE+
Sbjct: 94 QNESG 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,612,075
Number of Sequences: 539616
Number of extensions: 4756545
Number of successful extensions: 16128
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 16041
Number of HSP's gapped (non-prelim): 126
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)