BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1724
(473 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345479998|ref|XP_001605370.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Nasonia
vitripennis]
Length = 294
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/273 (75%), Positives = 233/273 (85%), Gaps = 2/273 (0%)
Query: 200 FNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
F +FP+IPRPFN YKCFSVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKL
Sbjct: 2 FRLFPEIPRPFNTQYKCFSVSMLPGNERQDVERGGKIIMPPSALDTLTRLNIVYPMLFKL 61
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
TN+K RITH GVLEFVADEGKVYLPYWMM NLLL EGE++N+E VSLPVAT+++FQPQ+
Sbjct: 62 TNKKTNRITHCGVLEFVADEGKVYLPYWMMHNLLLQEGEILNVECVSLPVATYARFQPQS 121
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNV 379
DFLDITNPKAVLEN LRNFACLT+GD+IAI YN++IYE+CVLETKPG+AVTIIECDMNV
Sbjct: 122 EDFLDITNPKAVLENGLRNFACLTTGDVIAIKYNARIYEMCVLETKPGSAVTIIECDMNV 181
Query: 380 DFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGT 439
+FAPPVGY EPEK KEEDN +DPVDLMPEP+GFVAF G GNRLDGK K+K++ T
Sbjct: 182 EFAPPVGYKEPEKPVSKEEDN-VDPVDLMPEPTGFVAFKGQGNRLDGK-KRKESAPTETA 239
Query: 440 PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHK 472
K Y RGIP YDY+ TL FLRN+KP + +
Sbjct: 240 SDKPVYVRGIPDYDYKIGTLKFLRNVKPVNVKE 272
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 83/102 (81%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+FP+IPRPFN YKCFSVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN
Sbjct: 4 LFPEIPRPFNTQYKCFSVSMLPGNERQDVERGGKIIMPPSALDTLTRLNIVYPMLFKLTN 63
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVE 102
+K RITH GVLEFVADEGKVYLPYW + E +VE
Sbjct: 64 KKTNRITHCGVLEFVADEGKVYLPYWMMHNLLLQEGEILNVE 105
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K RITH GVL
Sbjct: 16 YKCFSVSMLPGNERQDVERGGKIIMPPSALDTLTRLNIVYPMLFKLTNKKTNRITHCGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHK 194
LDGK K+K++ T K Y RGIP YDY+ TL FLRN+KP + +
Sbjct: 225 LDGK-KRKESAPTETASDKPVYVRGIPDYDYKIGTLKFLRNVKPVNVKE 272
>gi|383861689|ref|XP_003706317.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Megachile rotundata]
Length = 296
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/272 (73%), Positives = 232/272 (85%), Gaps = 2/272 (0%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFN+F ++PRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLF
Sbjct: 2 FGFNVFLEVPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNINYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K R+TH GVLEFVADEGKVYLPYWMMRNLLL E EL+N+ESVSLPVATFS+FQP
Sbjct: 62 KLTNKKTNRVTHCGVLEFVADEGKVYLPYWMMRNLLLQEEELINVESVSLPVATFSRFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ DFLDITNPKAVLEN LR+FACLT+GD+IAI YN +IYE+CVLETKPG AV+IIECDM
Sbjct: 122 QSEDFLDITNPKAVLENGLRSFACLTTGDIIAIKYNQRIYEMCVLETKPGPAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETG 437
NV+FAPPVGY EPE+ +K+E N++DP DLMP P+GFV F G GNRLDGK K+KD+ +
Sbjct: 182 NVEFAPPVGYVEPEEEVKKDE-NVMDPADLMPAPAGFVPFKGQGNRLDGK-KRKDSAQAE 239
Query: 438 GTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
+ K Y RGIP YDY+ TL+FLRN+KP +
Sbjct: 240 PSANKPTYVRGIPDYDYKIGTLIFLRNMKPTN 271
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 81/102 (79%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+F ++PRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 6 VFLEVPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVE 102
+K R+TH GVLEFVADEGKVYLPYW + E +VE
Sbjct: 66 KKTNRVTHCGVLEFVADEGKVYLPYWMMRNLLLQEEELINVE 107
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K R+TH GVL
Sbjct: 18 YKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTNKKTNRVTHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
LDGK K+KD+ + + K Y RGIP YDY+ TL+FLRN+KP +
Sbjct: 227 LDGK-KRKDSAQAEPSANKPTYVRGIPDYDYKIGTLIFLRNMKPTN 271
>gi|332374826|gb|AEE62554.1| unknown [Dendroctonus ponderosae]
Length = 298
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/268 (72%), Positives = 227/268 (84%), Gaps = 1/268 (0%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
FQFGFNMFP+IPRPF+ +Y+CFSV+M PGNER+DVERGGKIIMPPSALE+LTRLNI YPM
Sbjct: 2 FQFGFNMFPEIPRPFDATYQCFSVAMLPGNERQDVERGGKIIMPPSALEKLTRLNINYPM 61
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLTN+K R THSGVLEFVADEGK+YLP WMM N+ LDEG+LV IESVSLPV TFS+F
Sbjct: 62 LFKLTNKKSKRETHSGVLEFVADEGKIYLPLWMMHNMNLDEGDLVQIESVSLPVGTFSRF 121
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QP + DFLDITNP AVLENCLR+FACLT GD+IA+ YN K+YEL VLETKPG+A++IIEC
Sbjct: 122 QPLSSDFLDITNPTAVLENCLRSFACLTKGDIIAVQYNQKVYELLVLETKPGDAISIIEC 181
Query: 376 DMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
DMNV+FA PVGY EPE K+++E+ ++DP DLMPEPSGFVAF G GNRLDGK K+KD+
Sbjct: 182 DMNVEFAAPVGYQEPEVPKKRDEEMVLDPSDLMPEPSGFVAFKGAGNRLDGK-KRKDSSS 240
Query: 436 TGGTPTKREYQRGIPHYDYEPNTLVFLR 463
+K Y RGIP YDY+ TL F+R
Sbjct: 241 ADQGASKPVYVRGIPDYDYQIGTLRFIR 268
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPF+ +Y+CFSV+M PGNER+DVERGGKIIMPPSALE+LTRLNI YPMLFKLTN
Sbjct: 8 MFPEIPRPFDATYQCFSVAMLPGNERQDVERGGKIIMPPSALEKLTRLNINYPMLFKLTN 67
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R THSGVLEFVADEGK+YLP W
Sbjct: 68 KKSKRETHSGVLEFVADEGKIYLPLW 93
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSV+M PGNER+DVERGGKIIMPPSALE+LTRLNI YPMLFKLTN+K R THSGVL
Sbjct: 20 YQCFSVAMLPGNERQDVERGGKIIMPPSALEKLTRLNINYPMLFKLTNKKSKRETHSGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 185
LDGK K+KD+ +K Y RGIP YDY+ TL F+R
Sbjct: 230 LDGK-KRKDSSSADQGASKPVYVRGIPDYDYQIGTLRFIR 268
>gi|307212287|gb|EFN88095.1| Ubiquitin fusion degradation protein 1-like protein [Harpegnathos
saltator]
Length = 417
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/274 (75%), Positives = 234/274 (85%), Gaps = 1/274 (0%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
FQFGFNMFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPM
Sbjct: 120 FQFGFNMFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPM 179
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLTN+K RITH GVLEFVADEGKVYLPYWMM NLLL+EGEL+N+ESVSLPVATFS+F
Sbjct: 180 LFKLTNRKTNRITHCGVLEFVADEGKVYLPYWMMHNLLLEEGELLNVESVSLPVATFSRF 239
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QPQ+ DFLDITNPKAVLEN LR+FACLT+GD+IAI YN KIYE+CVLET+PG AV+IIEC
Sbjct: 240 QPQSEDFLDITNPKAVLENGLRSFACLTTGDVIAIKYNQKIYEMCVLETRPGLAVSIIEC 299
Query: 376 DMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
DMNV+FAPPVGY EPE+ +K+E+ M D +LMPEPSGFV F G G RLDGK K+KD +
Sbjct: 300 DMNVEFAPPVGYKEPERHIKKDEEQMEDLANLMPEPSGFVPFKGEGVRLDGK-KRKDWPK 358
Query: 436 TGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
T +K Y RGIP YDY+ TL FLRN+KPA+
Sbjct: 359 QEKTVSKPAYIRGIPDYDYQIGTLRFLRNMKPAN 392
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 126 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 185
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEFVADEGKVYLPYW
Sbjct: 186 RKTNRITHCGVLEFVADEGKVYLPYW 211
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K RITH GVL
Sbjct: 138 YKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNRKTNRITHCGVL 197
Query: 145 EL 146
E
Sbjct: 198 EF 199
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 144 LELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
+ LDGK K+KD + T +K Y RGIP YDY+ TL FLRN+KPA+
Sbjct: 346 VRLDGK-KRKDWPKQEKTVSKPAYIRGIPDYDYQIGTLRFLRNMKPAN 392
>gi|242013341|ref|XP_002427368.1| ubiquitin fusion degradaton protein, putative [Pediculus humanus
corporis]
gi|212511737|gb|EEB14630.1| ubiquitin fusion degradaton protein, putative [Pediculus humanus
corporis]
Length = 316
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/277 (70%), Positives = 227/277 (81%), Gaps = 1/277 (0%)
Query: 197 QFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
F FN FP+IPR F Y+C+SVSM PGN+REDVERGGKIIMPPSAL+ LT+LNI YPML
Sbjct: 12 HFSFNAFPEIPRSFIVQYRCYSVSMLPGNDREDVERGGKIIMPPSALDALTKLNIIYPML 71
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
FKLTN+KM R+THSGVLEFVADE +VYLPYWMMRNLLL+EG+L++IE+V+LPVATFS+FQ
Sbjct: 72 FKLTNKKMSRVTHSGVLEFVADEDRVYLPYWMMRNLLLEEGDLIHIENVTLPVATFSRFQ 131
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
PQT DFLDI+NPKAVLENCLR+FACLT+GD+IAI YNSK+YELCVLETKPG AVTIIECD
Sbjct: 132 PQTEDFLDISNPKAVLENCLRSFACLTTGDIIAIKYNSKVYELCVLETKPGEAVTIIECD 191
Query: 377 MNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
MNVDFAPPVGY EP +++ + E +D PE GFVAF G GNRLDGK K+KD V
Sbjct: 192 MNVDFAPPVGYKEPNQLESEPEKMAVDEEMFAPESCGFVAFKGAGNRLDGK-KRKDAVAQ 250
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+ K Y RGIP Y+Y+ TL F+RN KP + KE
Sbjct: 251 ETSTVKTTYSRGIPDYNYKVGTLKFIRNSKPPQSIKE 287
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 76/85 (89%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
FP+IPR F Y+C+SVSM PGN+REDVERGGKIIMPPSAL+ LT+LNI YPMLFKLTN+
Sbjct: 18 FPEIPRSFIVQYRCYSVSMLPGNDREDVERGGKIIMPPSALDALTKLNIIYPMLFKLTNK 77
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
KM R+THSGVLEFVADE +VYLPYW
Sbjct: 78 KMSRVTHSGVLEFVADEDRVYLPYW 102
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 56/62 (90%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGN+REDVERGGKIIMPPSAL+ LT+LNI YPMLFKLTN+KM R+THSGVL
Sbjct: 29 YRCYSVSMLPGNDREDVERGGKIIMPPSALDALTKLNIIYPMLFKLTNKKMSRVTHSGVL 88
Query: 145 EL 146
E
Sbjct: 89 EF 90
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFPD 205
LDGK K+KD V + K Y RGIP Y+Y+ TL F+RN KP + KE N P
Sbjct: 239 LDGK-KRKDAVAQETSTVKTTYSRGIPDYNYKVGTLKFIRNSKPPQSIKE-----NQDP- 291
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGK 235
N +K F+ + F + D E+GGK
Sbjct: 292 -----NEDFKAFTGAGFSLKQSFDKEKGGK 316
>gi|239788276|dbj|BAH70826.1| ACYPI006611 [Acyrthosiphon pisum]
Length = 317
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/277 (70%), Positives = 227/277 (81%), Gaps = 2/277 (0%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F ++F DI RPFN Y+C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLF
Sbjct: 2 FSLSLFNDILRPFNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K R TH GVLEF+A++ K+Y+PYWMM+NLLLDEG++V +ESVSL VATFSKFQP
Sbjct: 62 KLTNRKSNRQTHCGVLEFIAEDEKIYIPYWMMKNLLLDEGDVVQVESVSLEVATFSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q +FLDITNPKAVLENCLRNFACLT+GD+IAI YN K+YE+CVLETKPGNAV+IIECDM
Sbjct: 122 QNSEFLDITNPKAVLENCLRNFACLTTGDVIAIKYNQKVYEMCVLETKPGNAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKE-KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
NV+FA PVGY EP K+ ED M+DP DLMPEP+GF+AF G+GNRLDGK KKKD +
Sbjct: 182 NVEFAAPVGYQEPTHEKKPAAEDMMVDPADLMPEPTGFIAFKGSGNRLDGK-KKKDNSDD 240
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
K YQRGIP YDY T+ F+RNI+P + KE
Sbjct: 241 QSNKVKPVYQRGIPDYDYNIGTIQFIRNIRPVNNDKE 277
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 74/86 (86%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+F DI RPFN Y+C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN
Sbjct: 6 LFNDILRPFNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R TH GVLEF+A++ K+Y+PYW
Sbjct: 66 RKSNRQTHCGVLEFIAEDEKIYIPYW 91
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 56/68 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 18 YRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTNRKSNRQTHCGVL 77
Query: 145 ELDGKRKK 152
E + +K
Sbjct: 78 EFIAEDEK 85
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE--FQFGFNMF 203
LDGK KKKD + K YQRGIP YDY T+ F+RNI+P + KE Q GF F
Sbjct: 229 LDGK-KKKDNSDDQSNKVKPVYQRGIPDYDYNIGTIQFIRNIRPVNNDKEDGNQEGFKPF 287
>gi|326320041|ref|NP_001191887.1| ubiquitin fusion degradation protein 1 homolog [Acyrthosiphon
pisum]
Length = 300
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/277 (70%), Positives = 227/277 (81%), Gaps = 2/277 (0%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F ++F DI RPFN Y+C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLF
Sbjct: 2 FSLSLFNDILRPFNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K R TH GVLEF+A++ K+Y+PYWMM+NLLLDEG++V +ESVSL VATFSKFQP
Sbjct: 62 KLTNRKSNRQTHCGVLEFIAEDEKIYIPYWMMKNLLLDEGDVVQVESVSLEVATFSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q +FLDITNPKAVLENCLRNFACLT+GD+IAI YN K+YE+CVLETKPGNAV+IIECDM
Sbjct: 122 QNSEFLDITNPKAVLENCLRNFACLTTGDVIAIKYNQKVYEMCVLETKPGNAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKE-KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
NV+FA PVGY EP K+ ED M+DP DLMPEP+GF+AF G+GNRLDGK KKKD +
Sbjct: 182 NVEFAAPVGYQEPTHEKKPAAEDMMVDPADLMPEPTGFIAFKGSGNRLDGK-KKKDNSDD 240
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
K YQRGIP YDY T+ F+RNI+P + KE
Sbjct: 241 QSNKVKPVYQRGIPDYDYNIGTIQFIRNIRPVNNDKE 277
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 74/86 (86%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+F DI RPFN Y+C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN
Sbjct: 6 LFNDILRPFNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R TH GVLEF+A++ K+Y+PYW
Sbjct: 66 RKSNRQTHCGVLEFIAEDEKIYIPYW 91
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 56/68 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PG+EREDVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 18 YRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTNRKSNRQTHCGVL 77
Query: 145 ELDGKRKK 152
E + +K
Sbjct: 78 EFIAEDEK 85
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE--FQFGFNMF 203
LDGK KKKD + K YQRGIP YDY T+ F+RNI+P + KE Q GF F
Sbjct: 229 LDGK-KKKDNSDDQSNKVKPVYQRGIPDYDYNIGTIQFIRNIRPVNNDKEDGNQEGFKPF 287
>gi|307178215|gb|EFN67000.1| Ubiquitin fusion degradation protein 1-like protein [Camponotus
floridanus]
Length = 287
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/274 (74%), Positives = 231/274 (84%), Gaps = 1/274 (0%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
FQFGFNMFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPM
Sbjct: 1 FQFGFNMFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPM 60
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLTN+K RITH GVLEF+ADEGKVYLPYWMM NLLL+EGEL+N+ESVSLP+ATFS+F
Sbjct: 61 LFKLTNKKTNRITHCGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPIATFSRF 120
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QPQ+ DFLDITNPKAVLEN LR+FACLT+GD+IAI YN KIYE+CVLET+PG+AV+IIEC
Sbjct: 121 QPQSEDFLDITNPKAVLENGLRSFACLTTGDLIAIKYNQKIYEMCVLETRPGSAVSIIEC 180
Query: 376 DMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
DMNV+FAPPVGY EP++ +KEE+ M D DLMP P+GFV F G G RLDGK K+KDT
Sbjct: 181 DMNVEFAPPVGYKEPKREIKKEENEMEDLADLMPAPTGFVPFKGEGVRLDGK-KRKDTPR 239
Query: 436 TGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
K Y RGIP YDY+ TL FLRN+KP +
Sbjct: 240 QETLAAKPVYIRGIPDYDYQIGTLRFLRNMKPTN 273
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 7 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 66
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEF+ADEGKVYLPYW
Sbjct: 67 KKTNRITHCGVLEFIADEGKVYLPYW 92
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K RITH GVL
Sbjct: 19 YKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITHCGVL 78
Query: 145 EL 146
E
Sbjct: 79 EF 80
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 144 LELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
+ LDGK K+KDT K Y RGIP YDY+ TL FLRN+KP +
Sbjct: 227 VRLDGK-KRKDTPRQETLAAKPVYIRGIPDYDYQIGTLRFLRNMKPTN 273
>gi|157120560|ref|XP_001653664.1| ubiquitin fusion degradaton protein [Aedes aegypti]
gi|108874904|gb|EAT39129.1| AAEL009042-PA [Aedes aegypti]
Length = 303
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/280 (69%), Positives = 230/280 (82%), Gaps = 2/280 (0%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
FQF GFNM FPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ Y
Sbjct: 2 FQFNGFNMMFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K+ R TH+GVLEFVADEGK+Y+PYWMM NLLLDEG++V IESVSLPVA +S
Sbjct: 62 PMLFKLTNNKINRSTHAGVLEFVADEGKIYIPYWMMHNLLLDEGDIVQIESVSLPVAKYS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQPQ+ +FLDITNPKAVLENCLRNFACLT+GD+IAI YN+ YEL VLETKPG AVTII
Sbjct: 122 KFQPQSVEFLDITNPKAVLENCLRNFACLTTGDLIAIKYNNYTYELSVLETKPGPAVTII 181
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDT 433
ECDMNV+FAPPVGYTEP+K ++EE +DP +LMPEP+GFVAF G+G+RLDGK+KK +
Sbjct: 182 ECDMNVEFAPPVGYTEPQKKAKEEEPMAVDPAELMPEPAGFVAFKGSGSRLDGKKKKDGS 241
Query: 434 VETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
V + Y RGIP YD+ L F R ++ ++++
Sbjct: 242 VSESAPAHRANYVRGIPDYDHPFGLLRFDRTVRKVESNED 281
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN
Sbjct: 10 MFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K+ R TH+GVLEFVADEGK+Y+PYW
Sbjct: 70 NKINRSTHAGVLEFVADEGKIYIPYW 95
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN K+ R TH+GVL
Sbjct: 22 YKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKINRSTHAGVL 81
Query: 145 EL 146
E
Sbjct: 82 EF 83
>gi|157120562|ref|XP_001653665.1| ubiquitin fusion degradaton protein [Aedes aegypti]
gi|108874905|gb|EAT39130.1| AAEL009042-PB [Aedes aegypti]
Length = 301
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/276 (69%), Positives = 227/276 (82%), Gaps = 1/276 (0%)
Query: 199 GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
GFNM FPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLF
Sbjct: 4 GFNMMFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLF 63
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN K+ R TH+GVLEFVADEGK+Y+PYWMM NLLLDEG++V IESVSLPVA +SKFQP
Sbjct: 64 KLTNNKINRSTHAGVLEFVADEGKIYIPYWMMHNLLLDEGDIVQIESVSLPVAKYSKFQP 123
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ +FLDITNPKAVLENCLRNFACLT+GD+IAI YN+ YEL VLETKPG AVTIIECDM
Sbjct: 124 QSVEFLDITNPKAVLENCLRNFACLTTGDLIAIKYNNYTYELSVLETKPGPAVTIIECDM 183
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETG 437
NV+FAPPVGYTEP+K ++EE +DP +LMPEP+GFVAF G+G+RLDGK+KK +V
Sbjct: 184 NVEFAPPVGYTEPQKKAKEEEPMAVDPAELMPEPAGFVAFKGSGSRLDGKKKKDGSVSES 243
Query: 438 GTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+ Y RGIP YD+ L F R ++ ++++
Sbjct: 244 APAHRANYVRGIPDYDHPFGLLRFDRTVRKVESNED 279
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN
Sbjct: 8 MFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTN 67
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K+ R TH+GVLEFVADEGK+Y+PYW
Sbjct: 68 NKINRSTHAGVLEFVADEGKIYIPYW 93
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN K+ R TH+GVL
Sbjct: 20 YKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKINRSTHAGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|350401374|ref|XP_003486131.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Bombus
impatiens]
Length = 293
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/272 (71%), Positives = 225/272 (82%), Gaps = 4/272 (1%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF
Sbjct: 2 FGFNMFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
+L+N+K RITH GVLEFVADEG+VYLP WMM NLLL EGEL+N+ESV+LPVATFS+FQP
Sbjct: 62 RLSNEKTNRITHCGVLEFVADEGRVYLPCWMMYNLLLQEGELINVESVNLPVATFSRFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ DFLDITNPKAVLEN LRNFACLT+GD+IAI YN +IYE+CVLET+PG+AVTIIECDM
Sbjct: 122 QSEDFLDITNPKAVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGSAVTIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETG 437
NV+FAPP+GY E E K+++N++DP DLMP PSGFV F G GNRLDGK K++D +
Sbjct: 182 NVEFAPPLGYVEKET---KKDENVVDPADLMPAPSGFVPFKGEGNRLDGK-KRRDFAKPE 237
Query: 438 GTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
T +K Y RGIP YDY+ TL FLR KP +
Sbjct: 238 VTTSKPAYVRGIPDYDYKIGTLTFLRISKPVN 269
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF+L+N
Sbjct: 6 MFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEFVADEG+VYLP W
Sbjct: 66 EKTNRITHCGVLEFVADEGRVYLPCW 91
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 51/62 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF+L+N+K RITH GVL
Sbjct: 18 YRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSNEKTNRITHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
LDGK K++D + T +K Y RGIP YDY+ TL FLR KP +
Sbjct: 225 LDGK-KRRDFAKPEVTTSKPAYVRGIPDYDYKIGTLTFLRISKPVN 269
>gi|170058545|ref|XP_001864967.1| ubiquitin fusion degradation protein 1 [Culex quinquefasciatus]
gi|167877599|gb|EDS40982.1| ubiquitin fusion degradation protein 1 [Culex quinquefasciatus]
Length = 302
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 224/275 (81%), Gaps = 1/275 (0%)
Query: 199 GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
GFNM FPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLF
Sbjct: 4 GFNMMFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLF 63
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN K+ R TH+GVLEFVADEGK+Y+PYWMM NLLL+EG++V IESVS+PVAT+SKFQP
Sbjct: 64 KLTNNKINRSTHAGVLEFVADEGKIYIPYWMMHNLLLEEGDIVQIESVSIPVATYSKFQP 123
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q +FLDITNPKAVLENCLRNFACLT+GD+IAI YN+ +EL VLETKPG AVTIIECDM
Sbjct: 124 QNVEFLDITNPKAVLENCLRNFACLTTGDLIAIKYNNTSFELSVLETKPGPAVTIIECDM 183
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETG 437
NV+FAPPVGYTEP+K ++EE +DP +LMPEP+GFVAF G G RLDGK+KK +
Sbjct: 184 NVEFAPPVGYTEPQKKPKEEEPMAVDPAELMPEPAGFVAFKGAGTRLDGKKKKDNGANEA 243
Query: 438 GTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHK 472
+ Y RGIP Y++ L F R ++ A A++
Sbjct: 244 APVARANYVRGIPDYEHPFGLLRFDRTVRKAEANE 278
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN
Sbjct: 8 MFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTN 67
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K+ R TH+GVLEFVADEGK+Y+PYW
Sbjct: 68 NKINRSTHAGVLEFVADEGKIYIPYW 93
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN K+ R TH+GVL
Sbjct: 20 YKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKINRSTHAGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|340729118|ref|XP_003402855.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Bombus
terrestris]
Length = 293
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/272 (71%), Positives = 224/272 (82%), Gaps = 4/272 (1%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF
Sbjct: 2 FGFNMFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
+L+N+K RITH GVLEFVADEG+VYLP WMM NLLL EGEL+N+ESV+LPVATFS+FQP
Sbjct: 62 RLSNEKTNRITHCGVLEFVADEGRVYLPCWMMYNLLLQEGELINVESVNLPVATFSRFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ DFLDITNPKAVLEN LRNFACLT+GD+IAI YN +IYE+CVLET+PG AVTIIECDM
Sbjct: 122 QSEDFLDITNPKAVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETG 437
NV+FAPP+GY E E K+++N++DP DLMP PSGFV F G GNRLDGK K++D +
Sbjct: 182 NVEFAPPLGYVEKET---KKDENVVDPADLMPAPSGFVPFKGEGNRLDGK-KRRDFAKPE 237
Query: 438 GTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
T +K Y RGIP YDY+ TL FLR KP +
Sbjct: 238 VTTSKPAYVRGIPDYDYKIGTLTFLRISKPVN 269
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF+L+N
Sbjct: 6 MFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEFVADEG+VYLP W
Sbjct: 66 EKTNRITHCGVLEFVADEGRVYLPCW 91
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 51/62 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF+L+N+K RITH GVL
Sbjct: 18 YRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSNEKTNRITHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
LDGK K++D + T +K Y RGIP YDY+ TL FLR KP +
Sbjct: 225 LDGK-KRRDFAKPEVTTSKPAYVRGIPDYDYKIGTLTFLRISKPVN 269
>gi|193657081|ref|XP_001945441.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Acyrthosiphon pisum]
Length = 301
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/277 (68%), Positives = 226/277 (81%), Gaps = 2/277 (0%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F ++F I +PFN +Y+C+SVSM PG+ERE V+ GGKIIMPPSAL+ LTRLNI YPMLF
Sbjct: 2 FSLSLFNHILQPFNMTYRCWSVSMLPGSEREAVDSGGKIIMPPSALDALTRLNINYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KL+N++ R TH GVLEF+ADEGK+Y+PYWMM+NLLLDEG++V +ESVSL VATFSKFQP
Sbjct: 62 KLSNKRSNRQTHCGVLEFIADEGKIYIPYWMMKNLLLDEGDMVQVESVSLEVATFSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
+FLDITNPKAVLENCLRNFACLT+GD+IAI YN K YE+CVLETKPGNAV+IIECDM
Sbjct: 122 LNSEFLDITNPKAVLENCLRNFACLTTGDVIAIKYNQKNYEMCVLETKPGNAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKE-KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
NVDFAPPVGY EP+ K+ ED M+DP DLMPE SGF+AF G+GNRLDGK+KK++T +
Sbjct: 182 NVDFAPPVGYQEPKHEKKPATEDMMVDPADLMPELSGFIAFKGSGNRLDGKKKKENT-DD 240
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
K YQRGIP Y+Y T+ FLRNI+P KE
Sbjct: 241 PLNQVKAAYQRGIPDYEYTLGTIQFLRNIRPVIIDKE 277
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+F I +PFN +Y+C+SVSM PG+ERE V+ GGKIIMPPSAL+ LTRLNI YPMLFKL+N
Sbjct: 6 LFNHILQPFNMTYRCWSVSMLPGSEREAVDSGGKIIMPPSALDALTRLNINYPMLFKLSN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
++ R TH GVLEF+ADEGK+Y+PYW
Sbjct: 66 KRSNRQTHCGVLEFIADEGKIYIPYW 91
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSG 142
+ Y C+SVSM PG+ERE V+ GGKIIMPPSAL+ LTRLNI YPMLFKL+N++ R TH G
Sbjct: 16 MTYRCWSVSMLPGSEREAVDSGGKIIMPPSALDALTRLNINYPMLFKLSNKRSNRQTHCG 75
Query: 143 VLEL 146
VLE
Sbjct: 76 VLEF 79
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEF--QFGFNMF 203
LDGK+KK++T + K YQRGIP Y+Y T+ FLRNI+P KE Q GF F
Sbjct: 229 LDGKKKKENT-DDPLNQVKAAYQRGIPDYEYTLGTIQFLRNIRPVIIDKEIENQDGFKPF 287
>gi|380013827|ref|XP_003690947.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin fusion degradation
protein 1 homolog [Apis florea]
Length = 294
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/273 (71%), Positives = 224/273 (82%), Gaps = 5/273 (1%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLF
Sbjct: 2 FGFNMFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYW-MMRNLLLDEGELVNIESVSLPVATFSKFQ 316
KL+N+K RITH GVLEFVADEG+VYLP W MM NLLL EG+L+N+ESV+LPVATFS+FQ
Sbjct: 62 KLSNEKTNRITHCGVLEFVADEGRVYLPCWXMMYNLLLQEGDLINVESVNLPVATFSRFQ 121
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
PQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAI YN +IYE+CVLET+PG AVTIIECD
Sbjct: 122 PQSEDFLDITNPKAVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECD 181
Query: 377 MNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
MNV+FAPP+GY E E K+++N++DP DLMP PSGFV F G GNRLDGK K++D +
Sbjct: 182 MNVEFAPPLGYVEKET---KKDENVVDPADLMPAPSGFVPFKGEGNRLDGK-KRRDFAKP 237
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
T K Y RGIP YDY+ TL FLR IKP +
Sbjct: 238 EVTTNKPAYVRGIPDYDYKIGTLTFLRIIKPVN 270
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLFKL+N
Sbjct: 6 MFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEFVADEG+VYLP W
Sbjct: 66 EKTNRITHCGVLEFVADEGRVYLPCW 91
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 51/62 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLFKL+N+K RITH GVL
Sbjct: 18 YRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSNEKTNRITHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
LDGK K++D + T K Y RGIP YDY+ TL FLR IKP +
Sbjct: 226 LDGK-KRRDFAKPEVTTNKPAYVRGIPDYDYKIGTLTFLRIIKPVN 270
>gi|307178216|gb|EFN67001.1| Ubiquitin fusion degradation protein 1-like protein [Camponotus
floridanus]
Length = 281
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/268 (73%), Positives = 225/268 (83%), Gaps = 1/268 (0%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 1 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 60
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+K RITH GVLEF+ADEGKVYLPYWMM NLLL+EGEL+N+ESVSLP+ATFS+FQPQ+ D
Sbjct: 61 KKTNRITHCGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPIATFSRFQPQSED 120
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
FLDITNPKAVLEN LR+FACLT+GD+IAI YN KIYE+CVLET+PG+AV+IIECDMNV+F
Sbjct: 121 FLDITNPKAVLENGLRSFACLTTGDLIAIKYNQKIYEMCVLETRPGSAVSIIECDMNVEF 180
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPT 441
APPVGY EP++ +KEE+ M D DLMP P+GFV F G G RLDGK K+KDT
Sbjct: 181 APPVGYKEPKREIKKEENEMEDLADLMPAPTGFVPFKGEGVRLDGK-KRKDTPRQETLAA 239
Query: 442 KREYQRGIPHYDYEPNTLVFLRNIKPAS 469
K Y RGIP YDY+ TL FLRN+KP +
Sbjct: 240 KPVYIRGIPDYDYQIGTLRFLRNMKPTN 267
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 1 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 60
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEF+ADEGKVYLPYW
Sbjct: 61 KKTNRITHCGVLEFIADEGKVYLPYW 86
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K RITH GVL
Sbjct: 13 YKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITHCGVL 72
Query: 145 EL 146
E
Sbjct: 73 EF 74
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 144 LELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
+ LDGK K+KDT K Y RGIP YDY+ TL FLRN+KP +
Sbjct: 221 VRLDGK-KRKDTPRQETLAAKPVYIRGIPDYDYQIGTLRFLRNMKPTN 267
>gi|328790675|ref|XP_396320.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Apis
mellifera]
Length = 288
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 220/268 (82%), Gaps = 4/268 (1%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLFKL+N
Sbjct: 1 MFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSN 60
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+K RITH GVLEFVADEG+VYLP WMM NLLL EG+L+N+ESV+LPVATFS+FQPQ+ D
Sbjct: 61 EKTNRITHCGVLEFVADEGRVYLPCWMMYNLLLQEGDLINVESVNLPVATFSRFQPQSED 120
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
FLDITNPKAVLEN LRNFACLT+GD+IAI YN +IYE+CVLET+PG AVTIIECDMNV+F
Sbjct: 121 FLDITNPKAVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECDMNVEF 180
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPT 441
APP+GY E E K+++N++DP DLMP PSGFV F G GNRLDGK K++D + T
Sbjct: 181 APPLGYVEKET---KKDENVVDPADLMPAPSGFVPFKGEGNRLDGK-KRRDFAKPEVTTN 236
Query: 442 KREYQRGIPHYDYEPNTLVFLRNIKPAS 469
K Y RGIP YDY+ TL FLR IKP +
Sbjct: 237 KPAYVRGIPDYDYKIGTLTFLRIIKPVN 264
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+I RPFN Y+CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLFKL+N
Sbjct: 1 MFPEIVRPFNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSN 60
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEFVADEG+VYLP W
Sbjct: 61 EKTNRITHCGVLEFVADEGRVYLPCW 86
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 51/62 (82%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R DVERGGKIIMPPSALE LTRLNI +PMLFKL+N+K RITH GVL
Sbjct: 13 YRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSNEKTNRITHCGVL 72
Query: 145 EL 146
E
Sbjct: 73 EF 74
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
LDGK K++D + T K Y RGIP YDY+ TL FLR IKP +
Sbjct: 220 LDGK-KRRDFAKPEVTTNKPAYVRGIPDYDYKIGTLTFLRIIKPVN 264
>gi|321467795|gb|EFX78783.1| hypothetical protein DAPPUDRAFT_231070 [Daphnia pulex]
Length = 302
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 221/271 (81%), Gaps = 5/271 (1%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGF F ++PRPFN Y+C+SVSM PG ER DVE+GGKIIMPPSAL+QLTRLNI YPMLF
Sbjct: 2 FGFG-FLEMPRPFNTQYRCYSVSMLPGQERLDVEKGGKIIMPPSALDQLTRLNIVYPMLF 60
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN + G+ITH GVLEFVADEGK+YLPYWMM+NLLLDEG+L+NIES SLPVATFSKFQP
Sbjct: 61 KLTNPRAGQITHCGVLEFVADEGKIYLPYWMMQNLLLDEGDLLNIESASLPVATFSKFQP 120
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ DFLDI+NPKAVLEN LRNFACLTSGD++AI YN KIYEL VLETKPGNAV+IIECDM
Sbjct: 121 QSEDFLDISNPKAVLENALRNFACLTSGDVVAITYNEKIYELRVLETKPGNAVSIIECDM 180
Query: 378 NVDFAPPVGYTEPEKV-KEKEEDNM--IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTV 434
NV+FAPPVGY+EP KV KE +E++M +DP MPE GF+AF G G RLDGK +K
Sbjct: 181 NVEFAPPVGYSEPTKVSKESQEEHMDTLDPTSFMPEVQGFIAFAGEGVRLDGKIRKVKNE 240
Query: 435 ETGGTPTKREYQRGIPHYDYEPNTLVFLRNI 465
E K YQRG+P +DY+ L F+R +
Sbjct: 241 EPPPI-FKASYQRGVPDFDYQFGNLKFIRAV 270
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 75/85 (88%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F ++PRPFN Y+C+SVSM PG ER DVE+GGKIIMPPSAL+QLTRLNI YPMLFKLTN
Sbjct: 6 FLEMPRPFNTQYRCYSVSMLPGQERLDVEKGGKIIMPPSALDQLTRLNIVYPMLFKLTNP 65
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
+ G+ITH GVLEFVADEGK+YLPYW
Sbjct: 66 RAGQITHCGVLEFVADEGKIYLPYW 90
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PG ER DVE+GGKIIMPPSAL+QLTRLNI YPMLFKLTN + G+ITH GVL
Sbjct: 17 YRCYSVSMLPGQERLDVEKGGKIIMPPSALDQLTRLNIVYPMLFKLTNPRAGQITHCGVL 76
Query: 145 ELDGKRKK 152
E K
Sbjct: 77 EFVADEGK 84
>gi|118794962|ref|XP_321840.2| AGAP001307-PA [Anopheles gambiae str. PEST]
gi|116116547|gb|EAA01785.3| AGAP001307-PA [Anopheles gambiae str. PEST]
Length = 303
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/273 (69%), Positives = 225/273 (82%), Gaps = 2/273 (0%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
FQF GFNM FPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ Y
Sbjct: 2 FQFNGFNMMFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFK+TN + R TH+GVLEFVADEGK+Y+PYWMM NL LD+G++V IESVS+PVAT+S
Sbjct: 62 PMLFKITNGSINRSTHAGVLEFVADEGKIYMPYWMMHNLALDQGDIVEIESVSIPVATYS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQPQ+ +FLDITNPKAVLENCLRNFACLT+GD+IAI YN+ YEL VLETKPG AVTII
Sbjct: 122 KFQPQSVEFLDITNPKAVLENCLRNFACLTTGDLIAIKYNNTTYELSVLETKPGPAVTII 181
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDT 433
ECDMNV+FAPPVGYTEPE+ +++EE IDP +LMPEP+GFVAF G G RLDGK+KK +
Sbjct: 182 ECDMNVEFAPPVGYTEPERKEKEEEPMTIDPTELMPEPTGFVAFKGEGTRLDGKKKKDNG 241
Query: 434 VETGGTPTKREYQRGIPHYDYEPNTLVFLRNIK 466
++ Y RGIP YD+ L F R+++
Sbjct: 242 TNDAPAAQRQTYVRGIPDYDHPYGLLRFDRSVR 274
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 76/86 (88%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFK+TN
Sbjct: 10 MFPDHSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKITN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+ R TH+GVLEFVADEGK+Y+PYW
Sbjct: 70 GSINRSTHAGVLEFVADEGKIYMPYW 95
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFK+TN + R TH+GVL
Sbjct: 22 YKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKITNGSINRSTHAGVL 81
Query: 145 EL 146
E
Sbjct: 82 EF 83
>gi|332020651|gb|EGI61057.1| Ubiquitin fusion degradation protein 1-like protein [Acromyrmex
echinatior]
Length = 293
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/268 (73%), Positives = 221/268 (82%), Gaps = 1/268 (0%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 1 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 60
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+K RITH GVLEF+ADEGKVYLPYWMM NLLL+EGEL+N+ESVSLPVATFS+FQPQ+ D
Sbjct: 61 KKTNRITHCGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPVATFSRFQPQSED 120
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
FLDITNPKAVLEN LR+FACLT+GD+IAI YN KIYE+CVLET+PG AV+IIECDMNV+F
Sbjct: 121 FLDITNPKAVLENGLRSFACLTTGDVIAIKYNQKIYEMCVLETRPGPAVSIIECDMNVEF 180
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPT 441
APPVGY EP + +KEED DLMP +GFV F G G RLDGK K+KD + T
Sbjct: 181 APPVGYKEPVRKPKKEEDETEHLADLMPAQTGFVPFQGEGVRLDGK-KRKDMPKQETVST 239
Query: 442 KREYQRGIPHYDYEPNTLVFLRNIKPAS 469
K Y RGIP YDY+ TL FLRNIKP +
Sbjct: 240 KPTYVRGIPDYDYQIGTLRFLRNIKPVN 267
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPFN YKCFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 1 MFPEIPRPFNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTN 60
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K RITH GVLEF+ADEGKVYLPYW
Sbjct: 61 KKTNRITHCGVLEFIADEGKVYLPYW 86
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PG R+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K RITH GVL
Sbjct: 13 YKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITHCGVL 72
Query: 145 EL 146
E
Sbjct: 73 EF 74
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 144 LELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
+ LDGK K+KD + TK Y RGIP YDY+ TL FLRNIKP +
Sbjct: 221 VRLDGK-KRKDMPKQETVSTKPTYVRGIPDYDYQIGTLRFLRNIKPVN 267
>gi|357631593|gb|EHJ79062.1| putative ubiquitin fusion degradaton protein [Danaus plexippus]
Length = 293
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/269 (69%), Positives = 218/269 (81%), Gaps = 8/269 (2%)
Query: 213 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 272
+Y+C+SVSM PGNER+DVERGGKIIMPPSALE LTRLNI YPM+FKLTN+K RITH GV
Sbjct: 2 TYRCYSVSMLPGNERQDVERGGKIIMPPSALELLTRLNIEYPMIFKLTNKKTKRITHCGV 61
Query: 273 LEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVL 332
LEFVADEGKVYLP+WMM NL+L+EG LV IESVSLPVATFSKFQP + DFLDI+N KAVL
Sbjct: 62 LEFVADEGKVYLPHWMMANLVLEEGTLVQIESVSLPVATFSKFQPLSEDFLDISNQKAVL 121
Query: 333 ENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEK 392
ENCLRNF+CLT+GD+IAI YNSK+YELCVLETKPGNAV IIECDMNV+FAPPVGY E +
Sbjct: 122 ENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEEDH 181
Query: 393 VKEKEEDNMI-----DPVDLMPEPSGFVAFHGTGNRLDGKRKK---KDTVETGGTPTKRE 444
+ + E + + DP +MPEPSGFVAF G GNRLDGK+KK + E + +++
Sbjct: 182 ITKGEGSSDMGRMDEDPASMMPEPSGFVAFRGEGNRLDGKKKKLTSESESEPQASNSRQP 241
Query: 445 YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
Y RGIP YDY TL F+RN +P SA +E
Sbjct: 242 YVRGIPDYDYVIGTLRFIRNSRPPSAKEE 270
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 70/78 (89%)
Query: 12 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 71
+Y+C+SVSM PGNER+DVERGGKIIMPPSALE LTRLNI YPM+FKLTN+K RITH GV
Sbjct: 2 TYRCYSVSMLPGNERQDVERGGKIIMPPSALELLTRLNIEYPMIFKLTNKKTKRITHCGV 61
Query: 72 LEFVADEGKVYLPYWCFS 89
LEFVADEGKVYLP+W +
Sbjct: 62 LEFVADEGKVYLPHWMMA 79
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 55/64 (85%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSG 142
+ Y C+SVSM PGNER+DVERGGKIIMPPSALE LTRLNI YPM+FKLTN+K RITH G
Sbjct: 1 MTYRCYSVSMLPGNERQDVERGGKIIMPPSALELLTRLNIEYPMIFKLTNKKTKRITHCG 60
Query: 143 VLEL 146
VLE
Sbjct: 61 VLEF 64
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 146 LDGKRKK---KDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQ 197
LDGK+KK + E + +++ Y RGIP YDY TL F+RN +P SA +E Q
Sbjct: 218 LDGKKKKLTSESESEPQASNSRQPYVRGIPDYDYVIGTLRFIRNSRPPSAKEEVQ 272
>gi|312375159|gb|EFR22582.1| hypothetical protein AND_14508 [Anopheles darlingi]
Length = 294
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/266 (70%), Positives = 222/266 (83%), Gaps = 2/266 (0%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MFPD+ RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN
Sbjct: 1 MFPDLSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKLTN 60
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
K+ R+TH+GVLEFVADEGK+Y+PYWMMRNLLL+EG+ V IE VS+PVAT+SKF+PQ+ +
Sbjct: 61 SKINRVTHAGVLEFVADEGKIYIPYWMMRNLLLEEGDFVEIECVSIPVATYSKFEPQSVE 120
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
FLDITNPKAVLENCLRNFACLT+GD+IAI YN+ YEL VLETKPG AVTIIECDMNV+F
Sbjct: 121 FLDITNPKAVLENCLRNFACLTTGDLIAIKYNNTTYELSVLETKPGPAVTIIECDMNVEF 180
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPT 441
A PVGY EPE+ +++EE IDP +LMPEP+GFVAF G G RLDGK KKKD P
Sbjct: 181 AAPVGYKEPERKEKEEEPMTIDPTELMPEPTGFVAFKGEGTRLDGK-KKKDNGANDVVPV 239
Query: 442 KRE-YQRGIPHYDYEPNTLVFLRNIK 466
+R+ Y RGIP YD+ L F R+++
Sbjct: 240 QRQAYVRGIPDYDHPFGLLRFDRSVR 265
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 79/86 (91%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD+ RPFN +YKC+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN
Sbjct: 1 MFPDLSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKLTN 60
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K+ R+TH+GVLEFVADEGK+Y+PYW
Sbjct: 61 SKINRVTHAGVLEFVADEGKIYIPYW 86
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE GGKIIMPPSAL+QLTRLN+ YPMLFKLTN K+ R+TH+GVL
Sbjct: 13 YKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKLTNSKINRVTHAGVL 72
Query: 145 EL 146
E
Sbjct: 73 EF 74
>gi|427782195|gb|JAA56549.1| Putative ubiquitin fusion-degradation protein [Rhipicephalus
pulchellus]
Length = 303
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 217/282 (76%), Gaps = 10/282 (3%)
Query: 198 FGFNMFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
F FNMF D + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPML
Sbjct: 2 FPFNMFHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPML 61
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
FKLTN+K R TH GVLEFVADEGKVYLPYWM RNLLLDEG++V +ES +LPVATFSKFQ
Sbjct: 62 FKLTNKKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDIVQVESATLPVATFSKFQ 121
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
P + DFLDITNPKAVLEN LRNFACL++GD+IAI YN+K YELCVLETKPG AV+IIECD
Sbjct: 122 PLSVDFLDITNPKAVLENALRNFACLSTGDIIAIEYNNKNYELCVLETKPGKAVSIIECD 181
Query: 377 MNVDFAPPVGYTEPE-----KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKK 431
MNVDFAPPVGY EPE K +EKE + +D EP+GFVAF GTGNRLDGK + +
Sbjct: 182 MNVDFAPPVGYKEPEPRNAPKAQEKEAE--MDYAAFETEPTGFVAFSGTGNRLDGKNRCQ 239
Query: 432 DTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+ + K +RGIP YDY TL F+R +P E
Sbjct: 240 EAA--ANSMVKAIPKRGIPDYDYVIGTLRFIRTARPTVEDTE 279
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
MF D + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLT
Sbjct: 6 MFHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLT 65
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+K R TH GVLEFVADEGKVYLPYW
Sbjct: 66 NKKSNRETHCGVLEFVADEGKVYLPYW 92
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 19 YRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTNKKSNRETHCGVL 78
Query: 145 EL 146
E
Sbjct: 79 EF 80
>gi|346466209|gb|AEO32949.1| hypothetical protein [Amblyomma maculatum]
Length = 329
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/289 (65%), Positives = 219/289 (75%), Gaps = 8/289 (2%)
Query: 189 PASAHKEFQFGFNMFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLT 247
PAS K F FNMF D + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LT
Sbjct: 21 PASGLK--MFPFNMFHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLT 78
Query: 248 RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSL 307
RLNI YPMLFKLTN+K R TH GVLEFVADEGKVYLPYWM RNLLLDEG++V +ES +L
Sbjct: 79 RLNIVYPMLFKLTNKKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDIVQVESATL 138
Query: 308 PVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG 367
PVATFSKFQP + DFLDITNPKAVLEN LRNFACL++ D+IAI YN+K YELCVLETKPG
Sbjct: 139 PVATFSKFQPLSVDFLDITNPKAVLENALRNFACLSTNDVIAIEYNNKTYELCVLETKPG 198
Query: 368 NAVTIIECDMNVDFAPPVGYTEPEKV---KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRL 424
NAV+IIECDMNV+FAPPVGY +PE V K+ +++ +D +P FVAF GTGNRL
Sbjct: 199 NAVSIIECDMNVEFAPPVGYKDPEPVNAQKKPQKEAEMDYSAYEAQPLSFVAFSGTGNRL 258
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
DGK + ++ G K +RGIP YDY TL F+R +P E
Sbjct: 259 DGKVRSQEA--AAGNSVKTVPKRGIPDYDYTIGTLRFIRTARPTVEEAE 305
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
MF D + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLT
Sbjct: 32 MFHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLT 91
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+K R TH GVLEFVADEGKVYLPYW
Sbjct: 92 NKKSNRETHCGVLEFVADEGKVYLPYW 118
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 45 YRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTNKKSNRETHCGVL 104
Query: 145 EL 146
E
Sbjct: 105 EF 106
>gi|442754853|gb|JAA69586.1| Putative ubiquitin fusion-degradation protein [Ixodes ricinus]
Length = 303
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/275 (67%), Positives = 215/275 (78%), Gaps = 6/275 (2%)
Query: 198 FGFNMFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
F FNMF + + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPML
Sbjct: 2 FPFNMFHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPML 61
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
FKLTN+K R TH GVLEFVADEGKVYLPYWM RNLLLDEG+LV +ES +LPVATFSKFQ
Sbjct: 62 FKLTNKKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDLVQVESATLPVATFSKFQ 121
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
P + DFLDITNPKAVLEN LRNFACL++GD IAI YN+KIYELCVLET+PG AV+IIECD
Sbjct: 122 PLSVDFLDITNPKAVLENALRNFACLSTGDSIAIEYNNKIYELCVLETRPGKAVSIIECD 181
Query: 377 MNVDFAPPVGYTEPEKV---KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDT 433
MNV+FAPPVGY EPE K++E++ +D E +GFVAF G G RLDGK + +++
Sbjct: 182 MNVEFAPPVGYKEPEHHSAPKKQEKEAEMDLSAYDAEAAGFVAFSGKGTRLDGKARSQES 241
Query: 434 VETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPA 468
K +RGIP YDYE TL F+R +PA
Sbjct: 242 A--SNDVVKLPPRRGIPDYDYEIGTLRFIRTARPA 274
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 74/92 (80%), Gaps = 6/92 (6%)
Query: 1 MFP------DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 54
MFP + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPM
Sbjct: 1 MFPFNMFHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPM 60
Query: 55 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
LFKLTN+K R TH GVLEFVADEGKVYLPYW
Sbjct: 61 LFKLTNKKSNRETHCGVLEFVADEGKVYLPYW 92
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 19 YRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTNKKSNRETHCGVL 78
Query: 145 EL 146
E
Sbjct: 79 EF 80
>gi|270008879|gb|EFA05327.1| hypothetical protein TcasGA2_TC015491 [Tribolium castaneum]
Length = 239
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/227 (76%), Positives = 200/227 (88%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMFP+IPRPFN Y+C SV+M PGNER+DVERGGKIIMPPSALEQLTRLNI YPMLF
Sbjct: 2 FGFNMFPEIPRPFNMIYQCHSVAMLPGNERQDVERGGKIIMPPSALEQLTRLNINYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K R+TH GVLEFVADEGKVYLP WMM+N++L+EG+LV IESVSLPV TFSKFQP
Sbjct: 62 KLTNKKTNRVTHCGVLEFVADEGKVYLPLWMMQNMVLEEGDLVRIESVSLPVGTFSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
+ DFLDITNPKAVLENCLR+FACLT+GD+IA+ YN KIYELCVLETKPGNA++IIECDM
Sbjct: 122 LSPDFLDITNPKAVLENCLRSFACLTTGDVIAVKYNQKIYELCVLETKPGNAISIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRL 424
NV+FAPPVGY EPEKVK+++E+ +DP DLMPEP+G A G +
Sbjct: 182 NVEFAPPVGYKEPEKVKKEDEEMAVDPADLMPEPTGICALQRHGKSI 228
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+IPRPFN Y+C SV+M PGNER+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN
Sbjct: 6 MFPEIPRPFNMIYQCHSVAMLPGNERQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL 120
+K R+TH GVLEFVADEGKVYLP W + E D+ R + +P + L
Sbjct: 66 KKTNRVTHCGVLEFVADEGKVYLPLWMMQNMVL---EEGDLVRIESVSLPVGTFSKFQPL 122
Query: 121 NICYPMLFKLTNQK 134
+ P +TN K
Sbjct: 123 S---PDFLDITNPK 133
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 55/68 (80%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C SV+M PGNER+DVERGGKIIMPPSALEQLTRLNI YPMLFKLTN+K R+TH GVL
Sbjct: 18 YQCHSVAMLPGNERQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTNKKTNRVTHCGVL 77
Query: 145 ELDGKRKK 152
E K
Sbjct: 78 EFVADEGK 85
>gi|291232137|ref|XP_002736002.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Saccoglossus kowalevskii]
Length = 305
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/280 (63%), Positives = 218/280 (77%), Gaps = 8/280 (2%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMF ++ RPF Y+C+SVSM PGNER+DVE+GGKIIMPPSAL+QL+RLNI YPMLF
Sbjct: 2 FGFNMFENVGRPFKTQYRCYSVSMLPGNERQDVEKGGKIIMPPSALDQLSRLNIVYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K R+THSGVLEFVADEGK+YLPYW+MRNLLL+EG LV +ES SLPVAT+SKFQP
Sbjct: 62 KLTNKKTDRMTHSGVLEFVADEGKIYLPYWLMRNLLLEEGGLVQVESASLPVATYSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q DFLDITNPKAVLEN LR+FACLT+GD++AI YN K YEL V+ETKPG AV+IIECDM
Sbjct: 122 QASDFLDITNPKAVLENALRSFACLTTGDIVAIKYNKKDYELLVMETKPGKAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKE----EDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDT 433
+V+F PVGY EPE+ + ED ID DL + FVAF G+G+RLDGK+K+ +T
Sbjct: 182 SVEFDAPVGYKEPERQLPHQPLESEDMSIDSADLAVDR--FVAFQGSGHRLDGKKKRTET 239
Query: 434 VETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+ + Y RGIP+Y+Y+ + F+R KP +E
Sbjct: 240 KSS--NILQSTYTRGIPNYEYKKGKITFIRAPKPVDKTQE 277
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 77/86 (89%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MF ++ RPF Y+C+SVSM PGNER+DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN
Sbjct: 6 MFENVGRPFKTQYRCYSVSMLPGNERQDVEKGGKIIMPPSALDQLSRLNIVYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R+THSGVLEFVADEGK+YLPYW
Sbjct: 66 KKTDRMTHSGVLEFVADEGKIYLPYW 91
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER+DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+K R+THSGVL
Sbjct: 18 YRCYSVSMLPGNERQDVEKGGKIIMPPSALDQLSRLNIVYPMLFKLTNKKTDRMTHSGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|443694098|gb|ELT95315.1| hypothetical protein CAPTEDRAFT_175414 [Capitella teleta]
Length = 304
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 223/273 (81%), Gaps = 10/273 (3%)
Query: 198 FGFNMFPD--IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
FGFN F + R F ++Y+C+SVSM PG ER+DV++GGKIIMPPSAL+QLTRLNI YPM
Sbjct: 2 FGFNRFVNESAARTFKQTYRCYSVSMLPGQERQDVDKGGKIIMPPSALDQLTRLNIEYPM 61
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLTN+KM R TH GVLEFVADEG++YLPYWMM NLLL+EG LV++E++SLPVATF+KF
Sbjct: 62 LFKLTNEKMNRETHCGVLEFVADEGRIYLPYWMMTNLLLEEGSLVHLENMSLPVATFAKF 121
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
+PQ+ DFLDI+NPKAVLEN LRNFACLT+GDM+AI YN KIYE+ VLETKPG AVTIIEC
Sbjct: 122 EPQSVDFLDISNPKAVLENNLRNFACLTTGDMLAIKYNEKIYEMRVLETKPGKAVTIIEC 181
Query: 376 DMNVDFAPPVGYTEPE---KVKE--KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
DMNVDFAPPVGY EPE KV+E ++ED +D +D + + S F AF G+GNRLDGKR+
Sbjct: 182 DMNVDFAPPVGYQEPEVPKKVEEEHEQEDMSVDDIDFV-DHSKFRAFSGSGNRLDGKRRN 240
Query: 431 KDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
+D+ + P ++ +RG+P+YDY+ + F+R
Sbjct: 241 QDSECSDILP--QDIRRGVPNYDYKKGKITFIR 271
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 73/83 (87%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F ++Y+C+SVSM PG ER+DV++GGKIIMPPSAL+QLTRLNI YPMLFKLTN+KM R
Sbjct: 14 RTFKQTYRCYSVSMLPGQERQDVDKGGKIIMPPSALDQLTRLNIEYPMLFKLTNEKMNRE 73
Query: 67 THSGVLEFVADEGKVYLPYWCFS 89
TH GVLEFVADEG++YLPYW +
Sbjct: 74 THCGVLEFVADEGRIYLPYWMMT 96
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PG ER+DV++GGKIIMPPSAL+QLTRLNI YPMLFKLTN+KM R TH GVL
Sbjct: 20 YRCYSVSMLPGQERQDVDKGGKIIMPPSALDQLTRLNIEYPMLFKLTNEKMNRETHCGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|290562181|gb|ADD38487.1| Ubiquitin fusion degradation protein 1 homolog [Lepeophtheirus
salmonis]
Length = 307
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 214/281 (76%), Gaps = 12/281 (4%)
Query: 200 FNMF-PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F+ F P+IP RPFN Y C+S SM GN R +E GGKII+P SAL+QL+RLNI YPMLF
Sbjct: 2 FSFFGPEIPARPFNTQYACYSTSMLGGNVRSQLEWGGKIILPGSALDQLSRLNIVYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN+K GR +H+GVLEFVADEGKV+LPYWMM NL+L EG+++ +ES SLPVAT+SKFQP
Sbjct: 62 KLTNRKTGRTSHAGVLEFVADEGKVHLPYWMMENLMLGEGDILQVESASLPVATYSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
+ DFL+++NPKAVLE+ LRNFACL++GD+IAINYN +IY++ VLETKP AV+IIECDM
Sbjct: 122 HSLDFLELSNPKAVLESRLRNFACLSTGDVIAINYNDRIYQMSVLETKPDQAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPE--------KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
NV+FA PVGY EP+ +E++ED +D DL+P P GFVAF G G RLDGK+K
Sbjct: 182 NVEFAAPVGYVEPDAKSSSKNASAQEEDEDEPMDVTDLLPAPKGFVAFTGDGVRLDGKKK 241
Query: 430 KKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASA 470
+ T T G +REY RGIP D+ TL F+RN KP A
Sbjct: 242 R--TASTSGNSKEREYVRGIPDEDFAFGTLKFIRNSKPKKA 280
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Query: 3 PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
P+IP RPFN Y C+S SM GN R +E GGKII+P SAL+QL+RLNI YPMLFKLTN+
Sbjct: 7 PEIPARPFNTQYACYSTSMLGGNVRSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNR 66
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
K GR +H+GVLEFVADEGKV+LPYW
Sbjct: 67 KTGRTSHAGVLEFVADEGKVHLPYW 91
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S SM GN R +E GGKII+P SAL+QL+RLNI YPMLFKLTN+K GR +H+GVL
Sbjct: 18 YACYSTSMLGGNVRSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNRKTGRTSHAGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 138 ITHSGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASA 192
T GV LDGK+K+ T T G +REY RGIP D+ TL F+RN KP A
Sbjct: 229 FTGDGV-RLDGKKKR--TASTSGNSKEREYVRGIPDEDFAFGTLKFIRNSKPKKA 280
>gi|289740221|gb|ADD18858.1| ubiquitin fusion degradation protein [Glossina morsitans morsitans]
Length = 302
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/277 (66%), Positives = 211/277 (76%), Gaps = 8/277 (2%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
FQF GFNM FP+ R F SYKCFSVSM PGNEREDVE GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FQFSGFNMMFPETGRTFKASYKCFSVSMLPGNEREDVENGGKIIMPPSALDTLTRLNVEY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKL N K GR +H+GVLEFVADEGK YLPYWMM NLLL+EG+++ IESVSLPVA FS
Sbjct: 62 PMLFKLINNKKGRHSHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILTIESVSLPVAKFS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT+GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 122 KFQPHSTDFLDITNPKAVLENALRNFACLTTGDVIAIKYNKKVYELCVLETKPGNAVSII 181
Query: 374 ECDMNVDFAPPVGYTE-PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKD 432
ECDMNV+F PVGY E E+VKE D + P D + E F G+G RLDGK+KK++
Sbjct: 182 ECDMNVEFEAPVGYKETSEQVKENIRDEV--PQDHVMEEV-VETFKGSGVRLDGKKKKEN 238
Query: 433 TVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
++ K+ RG+P YDY+ L F IK S
Sbjct: 239 QLD--APVVKKVLARGVPDYDYKFGLLRFDHLIKAIS 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 72/86 (83%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F SYKCFSVSM PGNEREDVE GGKIIMPPSAL+ LTRLN+ YPMLFKL N
Sbjct: 10 MFPETGRTFKASYKCFSVSMLPGNEREDVENGGKIIMPPSALDTLTRLNVEYPMLFKLIN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K GR +H+GVLEFVADEGK YLPYW
Sbjct: 70 NKKGRHSHAGVLEFVADEGKCYLPYW 95
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNEREDVE GGKIIMPPSAL+ LTRLN+ YPMLFKL N K GR +H+GVL
Sbjct: 22 YKCFSVSMLPGNEREDVENGGKIIMPPSALDTLTRLNVEYPMLFKLINNKKGRHSHAGVL 81
Query: 145 EL 146
E
Sbjct: 82 EF 83
>gi|241816807|ref|XP_002414671.1| ubiquitin fusion-degradation protein, putative [Ixodes scapularis]
gi|215508882|gb|EEC18336.1| ubiquitin fusion-degradation protein, putative [Ixodes scapularis]
Length = 253
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 172/243 (70%), Positives = 197/243 (81%), Gaps = 8/243 (3%)
Query: 198 FGFNMFPD-IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
F FNMF + + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPML
Sbjct: 2 FPFNMFHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPML 61
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
FKLTN+K R TH GVLEFVADEGKVYLPYWM RNLLLDEG+LV +ES +LPVATFSKFQ
Sbjct: 62 FKLTNKKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDLVQVESATLPVATFSKFQ 121
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
P + DFLDITNPKAVLEN LRNFACL++GD IAI YN+KIYELCVLET+PG AV+IIECD
Sbjct: 122 PLSVDFLDITNPKAVLENALRNFACLSTGDSIAIEYNNKIYELCVLETRPGKAVSIIECD 181
Query: 377 MNVDFAPPVGYTEPE-----KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKK 431
MNV+FAPPVGY EPE K +EKE + + D E +GFVAF G G RLDGK + +
Sbjct: 182 MNVEFAPPVGYKEPEHHSAPKKQEKEAEMDLSAYD--AEAAGFVAFSGKGTRLDGKARSQ 239
Query: 432 DTV 434
++
Sbjct: 240 EST 242
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 74/92 (80%), Gaps = 6/92 (6%)
Query: 1 MFP------DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 54
MFP + RPFN Y+ +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPM
Sbjct: 1 MFPFNMFHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPM 60
Query: 55 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
LFKLTN+K R TH GVLEFVADEGKVYLPYW
Sbjct: 61 LFKLTNKKSNRETHCGVLEFVADEGKVYLPYW 92
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y +SVSM PGNER+DVERGGKIIMPPSAL+ LTRLNI YPMLFKLTN+K R TH GVL
Sbjct: 19 YRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTNKKSNRETHCGVL 78
Query: 145 EL 146
E
Sbjct: 79 EF 80
>gi|195128671|ref|XP_002008785.1| GI11622 [Drosophila mojavensis]
gi|193920394|gb|EDW19261.1| GI11622 [Drosophila mojavensis]
Length = 314
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/282 (63%), Positives = 207/282 (73%), Gaps = 10/282 (3%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPDGGRSFQVTYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN+K R +H+GVLEFVADEGK YLPYWMM NLLL+EG+++NIESVSL VATFS
Sbjct: 62 PMLFKLTNKKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILNIESVSLQVATFS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLET+PG+AV+II
Sbjct: 122 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETRPGDAVSII 181
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLDGK 427
ECDMNV+F PVGY E + + + G V F G+G RLDGK
Sbjct: 182 ECDMNVEFEAPVGYKEHSEQQPATQSGGQAAGGNDASAGGAVHEELVETFKGSGVRLDGK 241
Query: 428 RKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
+KK +ET K+ RG+P YDY+ L F R+IKP S
Sbjct: 242 KKKDSQLET--PVLKKVLPRGVPDYDYQFGLLRFDRSIKPIS 281
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPDGGRSFQVTYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPMLFKLTN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R +H+GVLEFVADEGK YLPYW
Sbjct: 70 KKKSRSSHAGVLEFVADEGKCYLPYW 95
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 69 SGVLEFVADEGKVY-LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 127
SG D G+ + + Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPML
Sbjct: 5 SGFNMMFPDGGRSFQVTYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPML 64
Query: 128 FKLTNQKMGRITHSGVLEL 146
FKLTN+K R +H+GVLE
Sbjct: 65 FKLTNKKKSRSSHAGVLEF 83
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK +ET K+ RG+P YDY+ L F R+IKP S
Sbjct: 234 SGV-RLDGKKKKDSQLET--PVLKKVLPRGVPDYDYQFGLLRFDRSIKPIS 281
>gi|194868901|ref|XP_001972352.1| GG13934 [Drosophila erecta]
gi|190654135|gb|EDV51378.1| GG13934 [Drosophila erecta]
Length = 314
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 207/285 (72%), Gaps = 14/285 (4%)
Query: 196 FQF-GFN-MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFN MFP+ P F SYKCFSVSM PGNER DVE+GGKIIMPPSAL++LTRLN+ Y
Sbjct: 2 FHFNGFNIMFPEGP-SFQASYKCFSVSMLPGNERSDVEKGGKIIMPPSALDRLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K R +H+GVLEFVADEGK YLPYWMM NLLL EG+++ IESVSLPVATFS
Sbjct: 61 PMLFKLTNGKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLGEGDILKIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV---------AFHGTGNRL 424
ECDMNV+F PVGY + + + E SG F G+G RL
Sbjct: 181 ECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTAGGEVSGATNAILEEVVETFKGSGVRL 240
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
DGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 DGKKKKESQLET--PVVKKVLARGVPDYDFQFGVIRFDRNIRPIS 283
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ P F SYKCFSVSM PGNER DVE+GGKIIMPPSAL++LTRLN+ YPMLFKLTN
Sbjct: 10 MFPEGP-SFQASYKCFSVSMLPGNERSDVEKGGKIIMPPSALDRLTRLNVEYPMLFKLTN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLPYW
Sbjct: 69 GKKSRSSHAGVLEFVADEGKCYLPYW 94
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMPPSAL++LTRLN+ YPMLFKLTN K R +H+GVL
Sbjct: 21 YKCFSVSMLPGNERSDVEKGGKIIMPPSALDRLTRLNVEYPMLFKLTNGKKSRSSHAGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 236 SGV-RLDGKKKKESQLET--PVVKKVLARGVPDYDFQFGVIRFDRNIRPIS 283
>gi|345486244|ref|XP_001599477.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Nasonia
vitripennis]
Length = 297
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/280 (62%), Positives = 213/280 (76%), Gaps = 9/280 (3%)
Query: 202 MFPDIPR-------PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYP 254
MFP I R FN +KC+S SM PG +R+D+E+GGKII+PPSAL+ LTRLN YP
Sbjct: 1 MFPMISRMPGGSRRSFNTHFKCYSASMLPGIDRQDIEQGGKIILPPSALDILTRLNTVYP 60
Query: 255 MLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
MLFKLTN+ R T+ GVLEF+A EG YLP WMMRNLLL EG+++N+ SVSLPVAT+++
Sbjct: 61 MLFKLTNRITRRETYCGVLEFIAGEGLAYLPCWMMRNLLLKEGDILNVMSVSLPVATYAR 120
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIE 374
FQPQ+ DFL+ITNPKAVLEN LRNFACLT+GD+IAI+YNS+IYE+ VLETKP AVTIIE
Sbjct: 121 FQPQSEDFLEITNPKAVLENGLRNFACLTAGDIIAISYNSRIYEMSVLETKPNPAVTIIE 180
Query: 375 CDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTV 434
CDMNV+FAPPVGY EPEK EE+N + VD+MPEP+GFVAF G GNRLDGK+ K+
Sbjct: 181 CDMNVEFAPPVGYKEPEK-PVSEEENSLGSVDMMPEPTGFVAFRGQGNRLDGKKGKESAP 239
Query: 435 ETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+ K Y GIP Y Y TL F+RN+KP++ KE
Sbjct: 240 TDNPSADKPVVYVMGIPDYAYTVGTLKFMRNVKPSANVKE 279
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Query: 1 MFPDIPR-------PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYP 53
MFP I R FN +KC+S SM PG +R+D+E+GGKII+PPSAL+ LTRLN YP
Sbjct: 1 MFPMISRMPGGSRRSFNTHFKCYSASMLPGIDRQDIEQGGKIILPPSALDILTRLNTVYP 60
Query: 54 MLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
MLFKLTN+ R T+ GVLEF+A EG YLP W
Sbjct: 61 MLFKLTNRITRRETYCGVLEFIAGEGLAYLPCW 93
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ C+S SM PG +R+D+E+GGKII+PPSAL+ LTRLN YPMLFKLTN+ R T+ GVL
Sbjct: 20 FKCYSASMLPGIDRQDIEQGGKIILPPSALDILTRLNTVYPMLFKLTNRITRRETYCGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|195379542|ref|XP_002048537.1| GJ11302 [Drosophila virilis]
gi|194155695|gb|EDW70879.1| GJ11302 [Drosophila virilis]
Length = 314
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 207/282 (73%), Gaps = 10/282 (3%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPDGGRSFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN+K R +H+GVLEFVADEGK YLPYWMM NLLL+EG++++IESVSL VATFS
Sbjct: 62 PMLFKLTNKKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILSIESVSLQVATFS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 122 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 181
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLDGK 427
ECDMNV+F PVGY E + + + G V F G+G RLDGK
Sbjct: 182 ECDMNVEFEAPVGYKEHGEQQPAAQSGGQGAGANEAAAGGAVHEEVVETFKGSGVRLDGK 241
Query: 428 RKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
+KK +ET K+ RG+P YDY+ L F R+IKP S
Sbjct: 242 KKKDSQLET--PVLKKVLPRGVPDYDYQFGLLRFDRSIKPIS 281
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPDGGRSFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R +H+GVLEFVADEGK YLPYW
Sbjct: 70 KKKSRSSHAGVLEFVADEGKCYLPYW 95
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN+K R +H+GVL
Sbjct: 22 YKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNKKKSRSSHAGVL 81
Query: 145 EL 146
E
Sbjct: 82 EF 83
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK +ET K+ RG+P YDY+ L F R+IKP S
Sbjct: 234 SGV-RLDGKKKKDSQLET--PVLKKVLPRGVPDYDYQFGLLRFDRSIKPIS 281
>gi|72008971|ref|XP_784491.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115760544|ref|XP_001178208.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 308
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/280 (63%), Positives = 210/280 (75%), Gaps = 9/280 (3%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFN F P F Y+CFSVSM G REDVERGGKIIMPPSAL+ L+RL+I YPMLF
Sbjct: 2 FGFNSFASFPNQFKTQYRCFSVSMLSGTYREDVERGGKIIMPPSALDTLSRLHIEYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNI--ESVSLPVATFSKF 315
KLTN+K R T+ GVLEFVADEGKVYLPYWMM+NLLLDEG+L+NI E+ LPVAT+SKF
Sbjct: 62 KLTNKKANRTTNCGVLEFVADEGKVYLPYWMMQNLLLDEGDLLNIQVEANGLPVATYSKF 121
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QPQ+ DFLDI+NPKAVLEN LR FACLT GDM+AI YN KIYEL VLETKP +AV+IIEC
Sbjct: 122 QPQSVDFLDISNPKAVLENILRGFACLTKGDMVAIKYNDKIYELEVLETKPSDAVSIIEC 181
Query: 376 DMNVDFAPPVGYTEPEKVKEKE---EDNMIDPVDLMP--EPSGFVAFHGTGNRLDGKRKK 430
DM+V+FAPPV Y EP+ + KE E+ +D D + + F AF G G+RLDGK+K
Sbjct: 182 DMSVEFAPPVDYVEPQMPRAKEHQHEEMQVDNTDYSQYIDVNKFRAFQGEGHRLDGKKKN 241
Query: 431 KDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASA 470
D P + QRGIP+YDY+ TL F+R I+P++A
Sbjct: 242 VDYKPV--IPPEDIPQRGIPNYDYKKGTLTFIRRIRPSAA 279
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F P F Y+CFSVSM G REDVERGGKIIMPPSAL+ L+RL+I YPMLFKLTN+
Sbjct: 7 FASFPNQFKTQYRCFSVSMLSGTYREDVERGGKIIMPPSALDTLSRLHIEYPMLFKLTNK 66
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
K R T+ GVLEFVADEGKVYLPYW
Sbjct: 67 KANRTTNCGVLEFVADEGKVYLPYW 91
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM G REDVERGGKIIMPPSAL+ L+RL+I YPMLFKLTN+K R T+ GVL
Sbjct: 18 YRCFSVSMLSGTYREDVERGGKIIMPPSALDTLSRLHIEYPMLFKLTNKKANRTTNCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 146 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASA 192
LDGK+K D P + QRGIP+YDY+ TL F+R I+P++A
Sbjct: 235 LDGKKKNVDYKPV--IPPEDIPQRGIPNYDYKKGTLTFIRRIRPSAA 279
>gi|17737561|ref|NP_524023.1| ubiquitin fusion-degradation 1-like [Drosophila melanogaster]
gi|12230660|sp|Q9VTF9.1|UFD1_DROME RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|12656069|gb|AAK00730.1|AF228282_1 ubiquitin fusion-degradation 1-like protein [Drosophila
melanogaster]
gi|7294755|gb|AAF50090.1| ubiquitin fusion-degradation 1-like [Drosophila melanogaster]
gi|12656071|gb|AAK00731.1| ubiquitin fusion-degradation 1-like protein [Drosophila
melanogaster]
gi|16768128|gb|AAL28283.1| GH18603p [Drosophila melanogaster]
gi|220944186|gb|ACL84636.1| Ufd1-like-PA [synthetic construct]
gi|220954134|gb|ACL89610.1| Ufd1-like-PA [synthetic construct]
Length = 316
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/285 (62%), Positives = 209/285 (73%), Gaps = 14/285 (4%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K R +H+GVLEFVADEGK YLP+WMM NLLL EG+++NIESVSLPVATFS
Sbjct: 61 PMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV---------AFHGTGNRL 424
ECDMNV+F PVGY + + + + E +G F G+G RL
Sbjct: 181 ECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRL 240
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
DGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 DGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPE-GRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLP+W
Sbjct: 69 VKKSRSSHAGVLEFVADEGKCYLPHW 94
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN K R +H+GVL
Sbjct: 21 YKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSHAGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 236 SGV-RLDGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
>gi|195589441|ref|XP_002084460.1| GD12819 [Drosophila simulans]
gi|194196469|gb|EDX10045.1| GD12819 [Drosophila simulans]
Length = 316
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/285 (62%), Positives = 209/285 (73%), Gaps = 14/285 (4%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K R +H+GVLEFVADEGK YLP+WMM NLLL EG+++NIESVSLPVATFS
Sbjct: 61 PMLFKLTNGKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSG---------FVAFHGTGNRL 424
ECDMNV+F PVGY + + + + E +G F G+G RL
Sbjct: 181 ECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEVAGANNAILEEVVETFKGSGVRL 240
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
DGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 DGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPE-GRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLP+W
Sbjct: 69 GKKSRSSHAGVLEFVADEGKCYLPHW 94
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 52/62 (83%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN K R +H+GVL
Sbjct: 21 YKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKSRSSHAGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 236 SGV-RLDGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
>gi|195326718|ref|XP_002030072.1| GM24769 [Drosophila sechellia]
gi|194119015|gb|EDW41058.1| GM24769 [Drosophila sechellia]
Length = 316
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/285 (62%), Positives = 208/285 (72%), Gaps = 14/285 (4%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFHPNYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K R +H+GVLEFVADEGK YLP+WMM NLLL EG+++NIESVSLPVATFS
Sbjct: 61 PMLFKLTNGKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSG---------FVAFHGTGNRL 424
ECDMNV+F PVGY + + + + E G F G+G RL
Sbjct: 181 ECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEVVGANNAILEEVVETFKGSGVRL 240
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
DGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 DGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPE-GRNFHPNYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLP+W
Sbjct: 69 GKKSRSSHAGVLEFVADEGKCYLPHW 94
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 78 EGKVYLP-YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 136
EG+ + P Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN K
Sbjct: 13 EGRNFHPNYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKS 72
Query: 137 RITHSGVLEL 146
R +H+GVLE
Sbjct: 73 RSSHAGVLEF 82
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 236 SGV-RLDGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
>gi|195020459|ref|XP_001985200.1| GH14636 [Drosophila grimshawi]
gi|193898682|gb|EDV97548.1| GH14636 [Drosophila grimshawi]
Length = 334
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/301 (59%), Positives = 209/301 (69%), Gaps = 31/301 (10%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPDGGRSFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEY 61
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN+K R +H+GVLEFVADEGK YLPYWMM NLLL+EG++++IESVSL VATFS
Sbjct: 62 PMLFKLTNKKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILSIESVSLQVATFS 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 122 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 181
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEE-------------------------DNMIDPVDLM 408
ECDMNV+F PVGY + + ++ + + L+
Sbjct: 182 ECDMNVEFEAPVGYKDHSEQQQAAQLAGNQAAGGSGGETGAAAGGGAGGSNAGAGGSALL 241
Query: 409 PEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPA 468
E F G+G RLDGK+KK +ET K+ RG+P YDY+ L F R IKP
Sbjct: 242 EEV--VETFKGSGVRLDGKKKKDSQLET--PVLKKMLPRGVPDYDYQFGLLRFDRAIKPI 297
Query: 469 S 469
S
Sbjct: 298 S 298
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPDGGRSFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPMLFKLTN 69
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R +H+GVLEFVADEGK YLPYW
Sbjct: 70 KKKSRSSHAGVLEFVADEGKCYLPYW 95
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN+K R +H+GVL
Sbjct: 22 YKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPMLFKLTNKKKSRSSHAGVL 81
Query: 145 EL 146
E
Sbjct: 82 EF 83
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK +ET K+ RG+P YDY+ L F R IKP S
Sbjct: 251 SGV-RLDGKKKKDSQLET--PVLKKMLPRGVPDYDYQFGLLRFDRAIKPIS 298
>gi|449282004|gb|EMC88935.1| Ubiquitin fusion degradation protein 1 like protein, partial
[Columba livia]
Length = 307
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/284 (63%), Positives = 215/284 (75%), Gaps = 21/284 (7%)
Query: 197 QFGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLN 250
QF FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLN
Sbjct: 1 QFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN 60
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVA 310
I YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VA
Sbjct: 61 ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA 120
Query: 311 TFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAV 370
T+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV
Sbjct: 121 TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV 180
Query: 371 TIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRL 424
+IIECDMNVDF P+GY EPE+ + EE D+ + SG+V AF G+GNRL
Sbjct: 181 SIIECDMNVDFDAPLGYKEPERSAQHEE-----TTDVEEDHSGYVSDIGFRAFSGSGNRL 235
Query: 425 DGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
DGK+K VE +P K + +RGIP+YD++ + F+RN +P
Sbjct: 236 DGKKK---GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRP 276
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|195493349|ref|XP_002094378.1| GE20233 [Drosophila yakuba]
gi|194180479|gb|EDW94090.1| GE20233 [Drosophila yakuba]
Length = 316
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/285 (62%), Positives = 208/285 (72%), Gaps = 14/285 (4%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFHATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKLTN K R +H+GVLEFVADEGK YLPYWMM NLLL EG+++NIESVSLPVATFS
Sbjct: 61 PMLFKLTNGKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLVEGDILNIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV---------AFHGTGNRL 424
ECDMNV+F PVGY + + + E +G F G+G RL
Sbjct: 181 ECDMNVEFEAPVGYKDHSETQASGSGQQGAAGAAGGEVAGATNAILEEVVETFKGSGVRL 240
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
DGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 DGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F+ +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN
Sbjct: 10 MFPE-GRNFHATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLPYW
Sbjct: 69 GKKSRSSHAGVLEFVADEGKCYLPYW 94
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 53/65 (81%)
Query: 82 YLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTN K R +H+
Sbjct: 18 HATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKSRSSHA 77
Query: 142 GVLEL 146
GVLE
Sbjct: 78 GVLEF 82
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 236 SGV-RLDGKKKKESQLET--PVVKKVLARGVPDYDFQFGLIRFDRNIRPIS 283
>gi|327280860|ref|XP_003225169.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Anolis
carolinensis]
Length = 307
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 214/279 (76%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV IESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQIESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + DP D + + GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAQHEEATEGEADPGDYVSD-KGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEANPFPIKPGDIRRGIPNYEFKIGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|195441598|ref|XP_002068592.1| GK20554 [Drosophila willistoni]
gi|194164677|gb|EDW79578.1| GK20554 [Drosophila willistoni]
Length = 325
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 207/291 (71%), Gaps = 20/291 (6%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
FQF GFNM FPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRL++ Y
Sbjct: 2 FQFNGFNMVFPD-GRIFKATYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLSVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKL N K R +H+GVLEFVADEGK YLPYWMM NLLL+EG++++IESVSLPVATFS
Sbjct: 61 PMLFKLNNTKKSRASHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILDIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVL+T+PGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLDTRPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKV---KEKEEDNMIDPVDLMPEPSG------------FVAFH 418
ECDMNV+F PVGY E + D E SG F
Sbjct: 181 ECDMNVEFEAPVGYNEQHAATGTSSQGGDGAQGTSAGQGEVSGTGQGTAGVLEEVIETFQ 240
Query: 419 GTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
G+G RLDGK+KK V+T K+ RG+P Y+++ L F R+IKP S
Sbjct: 241 GSGVRLDGKKKKDSQVDT--PVMKKVLPRGVPDYEFQFGMLRFDRSIKPIS 289
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+FPD R F +YKCFSVSM PGNER DVE+GGKIIMPPSAL+ LTRL++ YPMLFKL N
Sbjct: 10 VFPD-GRIFKATYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLSVEYPMLFKLNN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVE 102
K R +H+GVLEFVADEGK YLPYW + + D+E
Sbjct: 69 TKKSRASHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILDIE 110
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 78 EGKVY-LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 136
+G+++ Y CFSVSM PGNER DVE+GGKIIMPPSAL+ LTRL++ YPMLFKL N K
Sbjct: 13 DGRIFKATYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLSVEYPMLFKLNNTKKS 72
Query: 137 RITHSGVLEL 146
R +H+GVLE
Sbjct: 73 RASHAGVLEF 82
>gi|344295036|ref|XP_003419220.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Loxodonta africana]
Length = 444
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/290 (63%), Positives = 218/290 (75%), Gaps = 14/290 (4%)
Query: 188 KPASA-HKEFQFGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPP 240
K ASA H+ +F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPP
Sbjct: 128 KTASAYHRLSRFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPP 187
Query: 241 SALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELV 300
SAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV
Sbjct: 188 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLV 247
Query: 301 NIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELC 360
+ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL
Sbjct: 248 QVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 307
Query: 361 VLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFH 418
V+ETKP AV+IIECDMNVDF P+GY EPE+ EE D D E GF AF
Sbjct: 308 VMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVPHEESTDGEADHSGYAGE-LGFRAFS 366
Query: 419 GTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 367 GSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 413
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 156 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 215
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 216 HCGVLEFVADEGICYLPHW 234
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 160 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 219
Query: 144 LEL 146
LE
Sbjct: 220 LEF 222
>gi|449476983|ref|XP_002195503.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Taeniopygia guttata]
Length = 307
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 214/283 (75%), Gaps = 21/283 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ + EE D+ + SG+V AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERSAQHEE-----TADVEADHSGYVSDIGFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
GK+K VE +P K + +RGIP+YD++ + F+RN +P
Sbjct: 237 GKKK---GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|387019599|gb|AFJ51917.1| Ubiquitin fusion degradation 1 [Crotalus adamanteus]
Length = 307
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 213/283 (75%), Gaps = 21/283 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ EE D+ + SG+V AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQASHEES-----ADVEADHSGYVNDLGFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
GK+K VE +P K + +RGIP+YD++ + F+RN +P
Sbjct: 237 GKKK---GVEPSPSPIKPGDIRRGIPNYDFKIGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|426247979|ref|XP_004017745.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Ovis
aries]
Length = 328
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/286 (61%), Positives = 208/286 (72%), Gaps = 8/286 (2%)
Query: 188 KPASAHKEFQFGFNMFPD-IPR----PFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPS 241
+P QF FNMF IPR F+ Y+CFSVSM G N+R DVERGGKIIMPPS
Sbjct: 14 EPDCGQDSRQFSFNMFDHPIPRVFQSRFSTQYRCFSVSMLAGPNDRSDVERGGKIIMPPS 73
Query: 242 ALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVN 301
AL+QL+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV
Sbjct: 74 ALDQLSRLNITYPMLFKLTNKNSDRVTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQ 133
Query: 302 IESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCV 361
+ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V
Sbjct: 134 VESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRV 193
Query: 362 LETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTG 421
+ETKP AV+IIECDMNVDF P+GY EPE+ EE GF AF G+G
Sbjct: 194 METKPDKAVSIIECDMNVDFDAPLGYKEPERQAPHEEAEGEADHSGYTGELGFRAFSGSG 253
Query: 422 NRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKP 467
NRLDGK+K +T G P ++GIP+Y+++ + F+RN +P
Sbjct: 254 NRLDGKKKGVETAPQPGRPGS--CRQGIPNYEFKLGKITFIRNSRP 297
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVERGGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 41 FSTQYRCFSVSMLAGPNDRSDVERGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVT 100
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 101 HCGVLEFVADEGICYLPHW 119
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVERGGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 45 YRCFSVSMLAGPNDRSDVERGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVTHCGV 104
Query: 144 LEL 146
LE
Sbjct: 105 LEF 107
>gi|225718586|gb|ACO15139.1| Ubiquitin fusion degradation protein 1 homolog [Caligus clemensi]
Length = 312
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/287 (59%), Positives = 209/287 (72%), Gaps = 14/287 (4%)
Query: 200 FNMF-PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F+ F P+IP RPFN Y C+S SM GNER +E GGKII+P SAL+QL+RLNI YPMLF
Sbjct: 2 FSFFGPEIPARPFNTQYACYSTSMLGGNERSQLEWGGKIILPGSALDQLSRLNIVYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN + GR++H+GVLEFVADEGKV+LPYWMM NL L EG+L+ +ES SLPVAT+SKFQP
Sbjct: 62 KLTNPQTGRVSHAGVLEFVADEGKVHLPYWMMENLNLGEGDLLQVESASLPVATYSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
+ DFLD++NPKAVL + LRNFACL+SGD+IAINYN +IY++ VLETKP AV+IIECDM
Sbjct: 122 HSSDFLDLSNPKAVLVSRLRNFACLSSGDVIAINYNDRIYQMSVLETKPQTAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNM---------IDPVDLMPEPSGFVAFHGTGNRLDGKR 428
NV+FAPPVGY EP+ K++ +D L+P P GFVAF G G RLDGK
Sbjct: 182 NVEFAPPVGYVEPDHTVNKKKATATEDDDEDEPMDVSGLLPAPKGFVAFTGDGVRLDGK- 240
Query: 429 KKKDTVETGGTPTKR--EYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
KK+ T +G + +Y RGIP D+ TL +RN KP + E
Sbjct: 241 KKRTTSNSGCNSNIKDIQYVRGIPDEDFTIGTLKLIRNSKPKTNDLE 287
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 3 PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
P+IP RPFN Y C+S SM GNER +E GGKII+P SAL+QL+RLNI YPMLFKLTN
Sbjct: 7 PEIPARPFNTQYACYSTSMLGGNERSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNP 66
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
+ GR++H+GVLEFVADEGKV+LPYW
Sbjct: 67 QTGRVSHAGVLEFVADEGKVHLPYW 91
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S SM GNER +E GGKII+P SAL+QL+RLNI YPMLFKLTN + GR++H+GVL
Sbjct: 18 YACYSTSMLGGNERSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNPQTGRVSHAGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|432094843|gb|ELK26251.1| Ubiquitin fusion degradation protein 1 like protein [Myotis
davidii]
Length = 349
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/284 (63%), Positives = 215/284 (75%), Gaps = 13/284 (4%)
Query: 193 HKEFQFGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQL 246
+K +F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL
Sbjct: 39 YKRSRFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQL 98
Query: 247 TRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVS 306
+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+
Sbjct: 99 SRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVN 158
Query: 307 LPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP 366
L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP
Sbjct: 159 LQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKP 218
Query: 367 GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRL 424
AV+IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRL
Sbjct: 219 DKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRL 277
Query: 425 DGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
DGK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 278 DGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 318
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 61 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 120
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 121 HCGVLEFVADEGICYLPHW 139
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 65 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 124
Query: 144 LEL 146
LE
Sbjct: 125 LEF 127
>gi|348585331|ref|XP_003478425.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cavia
porcellus]
Length = 307
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 213/279 (76%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE +N D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTENEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|45383542|ref|NP_989632.1| ubiquitin fusion degradation protein 1 homolog [Gallus gallus]
gi|15426003|gb|AAK97650.1|AF407671_1 ubiquitin fusion-degradation 1-like protein [Gallus gallus]
gi|12656073|gb|AAK00732.1| ubiquitin fusion-degradation 1-like protein [Gallus gallus]
Length = 307
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 214/283 (75%), Gaps = 21/283 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LR+FACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRSFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ + EE D+ + SG+V AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERSAQHEE-----TTDVEADHSGYVSDVGFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
GK+K VE +P K + +RGIP+YD++ + F+RN +P
Sbjct: 237 GKKK---GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|395753002|ref|XP_002830893.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Pongo abelii]
Length = 323
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 213/281 (75%), Gaps = 13/281 (4%)
Query: 196 FQFGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRL 249
F F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RL
Sbjct: 16 FYFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL 75
Query: 250 NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPV 309
NI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L V
Sbjct: 76 NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQV 135
Query: 310 ATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA 369
AT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP A
Sbjct: 136 ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA 195
Query: 370 VTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
V+IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK
Sbjct: 196 VSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGK 254
Query: 428 RKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 255 KK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 292
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 27 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 86
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 87 NKNSDRMTHCGVLEFVADEGICYLPHW 113
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 39 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 98
Query: 144 LEL 146
LE
Sbjct: 99 LEF 101
>gi|417398706|gb|JAA46386.1| Putative ubiquitin fusion degradation protein 1 [Desmodus rotundus]
Length = 307
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE D D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTDGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|334327462|ref|XP_001379183.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Monodelphis domestica]
Length = 307
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 213/283 (75%), Gaps = 21/283 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ EE D+ + SG+V AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQTPHEET-----TDVEADHSGYVGELGFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
GK+K +E +P K + +RGIP+YD++ + F+RN +P
Sbjct: 237 GKKK---GIEPSPSPIKPGDIKRGIPNYDFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|387915964|gb|AFK11591.1| ubiquitin fusion degradation protein 1-like protein [Callorhinchus
milii]
gi|392883700|gb|AFM90682.1| ubiquitin fusion degradation protein 1-like protein [Callorhinchus
milii]
Length = 307
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 209/277 (75%), Gaps = 9/277 (3%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC 252
F FNMF IP F NR Y+C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I
Sbjct: 2 FAFNMFDQAIPHAFRNRFSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSIT 61
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATF 312
YPMLFKL N++ R+TH GVLEFVA+EG YLP+WMM+NLLL+EG LV +ESV+L VAT+
Sbjct: 62 YPMLFKLANKRTERVTHCGVLEFVAEEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATY 121
Query: 313 SKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTI 372
SKF+PQ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+I
Sbjct: 122 SKFEPQAPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDTAVSI 181
Query: 373 IECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP--VDLMPEPSGFVAFHGTGNRLDGKRKK 430
IECDMNVDF P+GY EPE+ + E+ +DP + GF AF G+GNRLDGK+K
Sbjct: 182 IECDMNVDFDAPLGYKEPERFSKHEDSLDLDPEEAAFLAADLGFRAFTGSGNRLDGKKKG 241
Query: 431 KDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKP 467
+ P + +RGIP+YD++ + F+RN +P
Sbjct: 242 VEPSPAHINP--EDIKRGIPNYDFKIGKITFIRNSRP 276
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 67/78 (85%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I YPMLFKL N++ R+TH
Sbjct: 19 FSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTH 78
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG YLP+W
Sbjct: 79 CGVLEFVAEEGICYLPHW 96
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I YPMLFKL N++ R+TH GVL
Sbjct: 23 YRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTHCGVL 82
Query: 145 EL 146
E
Sbjct: 83 EF 84
>gi|296191344|ref|XP_002743586.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Callithrix jacchus]
Length = 307
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|403304246|ref|XP_003942717.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Saimiri
boliviensis boliviensis]
Length = 307
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|426393528|ref|XP_004063071.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Gorilla gorilla gorilla]
Length = 307
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 213/279 (76%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE ++ D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTESEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|62901862|gb|AAY18882.1| ubiquitin fusion degradation 1-like [synthetic construct]
Length = 331
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/290 (62%), Positives = 217/290 (74%), Gaps = 15/290 (5%)
Query: 189 PASAHKEFQ--FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPP 240
P + + FQ F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPP
Sbjct: 15 PTTENLYFQGSFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPP 74
Query: 241 SALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELV 300
SAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV
Sbjct: 75 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLV 134
Query: 301 NIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELC 360
+ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL
Sbjct: 135 QVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 194
Query: 361 VLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFH 418
V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE + D E GF AF
Sbjct: 195 VMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFS 253
Query: 419 GTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 254 GSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 300
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 35 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 94
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 95 NKNSDRMTHCGVLEFVADEGICYLPHW 121
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 47 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 106
Query: 144 LEL 146
LE
Sbjct: 107 LEF 109
>gi|359323018|ref|XP_850373.3| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Canis
lupus familiaris]
gi|410977170|ref|XP_003994983.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Felis
catus]
Length = 307
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESAEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|194748120|ref|XP_001956497.1| GF24568 [Drosophila ananassae]
gi|190623779|gb|EDV39303.1| GF24568 [Drosophila ananassae]
Length = 317
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/286 (60%), Positives = 204/286 (71%), Gaps = 15/286 (5%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F +YKCFSVSM PGNER DVE+GGKIIMP SAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFTAAYKCFSVSMLPGNERSDVEKGGKIIMPNSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKL N K R +H+GVLEFVADEGK YLPYWMM NLLL+EG+++NIESVSLPVATFS
Sbjct: 61 PMLFKLINGKKSRSSHAGVLEFVADEGKCYLPYWMMDNLLLEEGDILNIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN K+YELCVLETKPGNAV+II
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV----------AFHGTGNR 423
ECDMNV+F PVGY + + + + F G+G R
Sbjct: 181 ECDMNVEFEAPVGYKDQSETQASGSGQQGAGAGAVGGELAGAANAVLEEVVETFKGSGVR 240
Query: 424 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 241 LDGKKKKESQLET--PVLKKVLPRGVPDYDFQFGLIRFDRNIRPIS 284
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F +YKCFSVSM PGNER DVE+GGKIIMP SAL+ LTRLN+ YPMLFKL N
Sbjct: 10 MFPE-GRNFTAAYKCFSVSMLPGNERSDVEKGGKIIMPNSALDTLTRLNVEYPMLFKLIN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLPYW
Sbjct: 69 GKKSRSSHAGVLEFVADEGKCYLPYW 94
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM PGNER DVE+GGKIIMP SAL+ LTRLN+ YPMLFKL N K R +H+GVL
Sbjct: 21 YKCFSVSMLPGNERSDVEKGGKIIMPNSALDTLTRLNVEYPMLFKLINGKKSRSSHAGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 141 SGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 191
SGV LDGK+KK+ +ET K+ RG+P YD++ + F RNI+P S
Sbjct: 237 SGV-RLDGKKKKESQLET--PVLKKVLPRGVPDYDFQFGLIRFDRNIRPIS 284
>gi|29501813|ref|NP_005650.2| ubiquitin fusion degradation protein 1 homolog isoform A [Homo
sapiens]
gi|149758697|ref|XP_001488669.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Equus
caballus]
gi|301770447|ref|XP_002920655.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Ailuropoda melanoleuca]
gi|332262705|ref|XP_003280400.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Nomascus leucogenys]
gi|397485938|ref|XP_003814093.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Pan paniscus]
gi|160332310|sp|Q92890.3|UFD1_HUMAN RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|4741983|gb|AAD28788.1|AF141201_1 ubiquitin fusion-degradation 1 protein [Homo sapiens]
gi|12053683|emb|CAC20414.1| ubiquitin fusion degradation 1 protein [Homo sapiens]
gi|12654447|gb|AAH01049.1| Ubiquitin fusion degradation 1 like (yeast) [Homo sapiens]
gi|13477241|gb|AAH05087.1| Ubiquitin fusion degradation 1 like (yeast) [Homo sapiens]
gi|21392363|gb|AAM48288.1| ubiquitin fusion degradation 1-like [Homo sapiens]
gi|47678745|emb|CAG30493.1| UFD1L [Homo sapiens]
gi|109451548|emb|CAK54634.1| UFD1L [synthetic construct]
gi|109452142|emb|CAK54933.1| UFD1L [synthetic construct]
gi|117644502|emb|CAL37746.1| hypothetical protein [synthetic construct]
gi|119623443|gb|EAX03038.1| ubiquitin fusion degradation 1 like (yeast), isoform CRA_b [Homo
sapiens]
gi|261859826|dbj|BAI46435.1| ubiquitin fusion degradation 1 like [synthetic construct]
gi|410213858|gb|JAA04148.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410262416|gb|JAA19174.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410288576|gb|JAA22888.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410336321|gb|JAA37107.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
Length = 307
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|291414740|ref|XP_002723616.1| PREDICTED: ubiquitin fusion degradation 1-like [Oryctolagus
cuniculus]
Length = 307
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 212/283 (74%), Gaps = 21/283 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPS------GFVAFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ + EE + E S GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAQHEES-----AEGEAEHSGYTGELGFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
GK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 237 GKKK---GVEPSPSPLKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|16758158|ref|NP_445870.1| ubiquitin fusion degradation protein 1 homolog [Rattus norvegicus]
gi|81881868|sp|Q9ES53.1|UFD1_RAT RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|11037254|gb|AAG27535.1|AF234601_1 UFD1 [Rattus norvegicus]
gi|149019812|gb|EDL77960.1| ubiquitin fusion degradation 1-like [Rattus norvegicus]
gi|171846755|gb|AAI61818.1| Ubiquitin fusion degradation 1 like (yeast) [Rattus norvegicus]
Length = 307
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|257153392|ref|NP_035802.3| ubiquitin fusion degradation protein 1 homolog [Mus musculus]
gi|342187103|sp|P70362.2|UFD1_MOUSE RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|13879310|gb|AAH06630.1| Ubiquitin fusion degradation 1 like [Mus musculus]
gi|74139416|dbj|BAE40849.1| unnamed protein product [Mus musculus]
gi|74151171|dbj|BAE27708.1| unnamed protein product [Mus musculus]
gi|148665119|gb|EDK97535.1| ubiquitin fusion degradation 1 like [Mus musculus]
Length = 307
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|194388222|dbj|BAG65495.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|225710802|gb|ACO11247.1| Ubiquitin fusion degradation protein 1 homolog [Caligus
rogercresseyi]
Length = 312
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/283 (58%), Positives = 209/283 (73%), Gaps = 13/283 (4%)
Query: 200 FNMF-PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F+ F P+IP RPFN Y C+S SM GN R +E GGKII+P SAL++L+RLNI YPMLF
Sbjct: 2 FSFFGPEIPARPFNTQYACYSTSMLGGNVRSQLEWGGKIILPSSALDRLSRLNIVYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN GR +H+GVLEFVADEGKV+LPYWMM NL+L EG+L+ +ES SLPVA++SKFQP
Sbjct: 62 KLTNPASGRFSHAGVLEFVADEGKVHLPYWMMENLMLGEGDLLRVESASLPVASYSKFQP 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
+ DFL+++NPKAVLE+ LRNFACL+SGD+IAINYN +IY++ VLETKP AV+IIECDM
Sbjct: 122 HSSDFLELSNPKAVLESRLRNFACLSSGDVIAINYNDRIYQMSVLETKPQAAVSIIECDM 181
Query: 378 NVDFAPPVGYTEPEKVKEKEEDNMIDPVD---LMPEPSGFVAFHGTGNRLDGKRKKKDTV 434
NV+FAPP+GY EP + ED+ +P+D L+P P GFVAF G G RLDGK+K+ +
Sbjct: 182 NVEFAPPLGYVEPTAPSKPTEDDEEEPMDIAGLLPAPKGFVAFQGDGVRLDGKKKRTSQL 241
Query: 435 ETGGTPTKR--------EYQRGIPHYDYEPNTLVFLRNIKPAS 469
T + + EY RGIP D+ TL F+RN K +
Sbjct: 242 NTNASTSNSTSNNNNEIEYTRGIPDEDFVFGTLKFIRNPKKGA 284
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 3 PDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
P+IP RPFN Y C+S SM GN R +E GGKII+P SAL++L+RLNI YPMLFKLTN
Sbjct: 7 PEIPARPFNTQYACYSTSMLGGNVRSQLEWGGKIILPSSALDRLSRLNIVYPMLFKLTNP 66
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
GR +H+GVLEFVADEGKV+LPYW
Sbjct: 67 ASGRFSHAGVLEFVADEGKVHLPYW 91
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S SM GN R +E GGKII+P SAL++L+RLNI YPMLFKLTN GR +H+GVL
Sbjct: 18 YACYSTSMLGGNVRSQLEWGGKIILPSSALDRLSRLNIVYPMLFKLTNPASGRFSHAGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|125979821|ref|XP_001353943.1| GA19461 [Drosophila pseudoobscura pseudoobscura]
gi|54640928|gb|EAL29679.1| GA19461 [Drosophila pseudoobscura pseudoobscura]
Length = 313
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 205/284 (72%), Gaps = 13/284 (4%)
Query: 196 FQF-GFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
F F GFNM FP+ R F+ +YKC+SVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ Y
Sbjct: 2 FHFSGFNMMFPE-GRNFHATYKCYSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKL+N K R +H+GVLEFVADEGK YLP+WMM NLLL+EG ++ IESVSLPVATFS
Sbjct: 61 PMLFKLSNNKKMRSSHAGVLEFVADEGKCYLPHWMMHNLLLEEGNILIIESVSLPVATFS 120
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KFQP + DFLDITNPKAVLEN LRNFACLT GD+IAI YN KIYELCVLET+PGNAV+II
Sbjct: 121 KFQPNSTDFLDITNPKAVLENALRNFACLTKGDVIAIKYNKKIYELCVLETRPGNAVSII 180
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVA--------FHGTGNRLD 425
ECDMNV+F PVGY E + + + S A F G G RLD
Sbjct: 181 ECDMNVEFEAPVGYKEHHETQIPGSGQQGTQGTGASDASALGAALEEVVETFKGPGVRLD 240
Query: 426 GKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPAS 469
GK+KK+ +ET K+ RG+P Y Y+ + F R+I+P S
Sbjct: 241 GKKKKESQLET--PVVKKFLPRGVPDYHYKFGQIRFDRSIRPVS 282
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP+ R F+ +YKC+SVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKL+N
Sbjct: 10 MFPE-GRNFHATYKCYSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLSN 68
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K R +H+GVLEFVADEGK YLP+W
Sbjct: 69 NKKMRSSHAGVLEFVADEGKCYLPHW 94
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%)
Query: 82 YLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ Y C+SVSM PGNER DVE+GGKIIMPPSAL+ LTRLN+ YPMLFKL+N K R +H+
Sbjct: 18 HATYKCYSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLSNNKKMRSSHA 77
Query: 142 GVLEL 146
GVLE
Sbjct: 78 GVLEF 82
>gi|395858802|ref|XP_003801747.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Otolemur
garnettii]
Length = 307
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 211/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAPHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|355563458|gb|EHH20020.1| Ubiquitin fusion degradation protein 1-like protein, partial
[Macaca mulatta]
Length = 306
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/278 (63%), Positives = 210/278 (75%), Gaps = 11/278 (3%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 1 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 60
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 61 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 120
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 121 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 180
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL-MPEPSGFVAFHGTGNRLDGKRKK 430
IIECDMNVDF P+GY EPE+ + EE + GF AF G+GNRLDGK+K
Sbjct: 181 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEAGHSGYAGELGFRAFSGSGNRLDGKKK- 239
Query: 431 KDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 240 --GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 275
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 10 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 69
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 70 NKNSDRMTHCGVLEFVADEGICYLPHW 96
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 22 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 81
Query: 144 LEL 146
LE
Sbjct: 82 LEF 84
>gi|383873009|ref|NP_001244660.1| ubiquitin fusion degradation protein 1 homolog [Macaca mulatta]
gi|380783603|gb|AFE63677.1| ubiquitin fusion degradation protein 1 homolog isoform A [Macaca
mulatta]
Length = 307
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/278 (63%), Positives = 210/278 (75%), Gaps = 11/278 (3%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL-MPEPSGFVAFHGTGNRLDGKRKK 430
IIECDMNVDF P+GY EPE+ + EE + GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEAGHSGYAGELGFRAFSGSGNRLDGKKK- 240
Query: 431 KDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 --GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|354480605|ref|XP_003502495.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Cricetulus griseus]
Length = 307
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/279 (63%), Positives = 211/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFS SM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSASMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYTGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFS SM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSASMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFS SM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSASMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|395518461|ref|XP_003763379.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Sarcophilus harrisii]
Length = 302
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 205/266 (77%), Gaps = 16/266 (6%)
Query: 210 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNP
Sbjct: 74 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 133
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY
Sbjct: 134 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 193
Query: 389 EPEKVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLDGKRKKKDTVETGGTPTK 442
EPE+ + EE D+ + SG+V AF G+GNRLDGK+K +E +P K
Sbjct: 194 EPERQTQHEE-----TADVEADHSGYVGELGFRAFSGSGNRLDGKKK---GIEPSPSPIK 245
Query: 443 -REYQRGIPHYDYEPNTLVFLRNIKP 467
+ +RGIP+YD++ + F+RN +P
Sbjct: 246 PGDIKRGIPNYDFKLGKITFIRNSRP 271
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 74 HCGVLEFVADEGICYLPHW 92
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 18 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 77
Query: 144 LEL 146
LE
Sbjct: 78 LEF 80
>gi|12845923|dbj|BAB26956.1| unnamed protein product [Mus musculus]
Length = 307
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LR+FACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRDFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|221045384|dbj|BAH14369.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 211/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLGRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 69/87 (79%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLGRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLGRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|355784789|gb|EHH65640.1| Ubiquitin fusion degradation protein 1-like protein, partial
[Macaca fascicularis]
Length = 306
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/278 (62%), Positives = 209/278 (75%), Gaps = 11/278 (3%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 1 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 60
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 61 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGSLVQVESVNLQVAT 120
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAI YN KIYEL V+ETKP AV+
Sbjct: 121 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAIKYNEKIYELRVMETKPDKAVS 180
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL-MPEPSGFVAFHGTGNRLDGKRKK 430
IIECDMNVDF P+GY EPE+ + EE + GF AF G+GNRLDGK+K
Sbjct: 181 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEAGHSGYAGELGFRAFSGSGNRLDGKKK- 239
Query: 431 KDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 240 --GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 275
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 10 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 69
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 70 NKNSDRMTHCGVLEFVADEGICYLPHW 96
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 22 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 81
Query: 144 LEL 146
LE
Sbjct: 82 LEF 84
>gi|1654348|gb|AAD08719.1| ubiquitin fusion-degradation 1 like protein [Mus musculus]
Length = 307
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/279 (63%), Positives = 212/279 (75%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFAC+T+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EP++ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPKRPVQHEESIEGEADHSGYAGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|432873442|ref|XP_004072218.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Oryzias
latipes]
Length = 310
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/284 (59%), Positives = 210/284 (73%), Gaps = 21/284 (7%)
Query: 198 FGFNMFP-----DIPRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F F++F P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFHVFDPPMGRGFPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPS-------GFVAFHGTGNRL 424
IIECDMNVDF P+GY EPE+ + ++ +P + P+PS GF AF G+GNRL
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRSQNQD----EPTEEEPDPSSYADMDLGFRAFTGSGNRL 237
Query: 425 DGKRKKKDTVETGGTP-TKREYQRGIPHYDYEPNTLVFLRNIKP 467
DGK K +E P + +RGIP+YD++ + F+RN +P
Sbjct: 238 DGKTK---GIEPNPVPLAASDIKRGIPNYDFKVGKITFIRNSRP 278
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Query: 6 PRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+
Sbjct: 16 PNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSD 75
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
R+TH GVLEFVADEG YLP+W
Sbjct: 76 RMTHCGVLEFVADEGICYLPHW 97
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|225715190|gb|ACO13441.1| Ubiquitin fusion degradation protein 1 homolog [Esox lucius]
Length = 309
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/280 (62%), Positives = 209/280 (74%), Gaps = 13/280 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPE---KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKR 428
IIECDMNVDF P+GY EPE KV E+ + DP F AF G+GNRLDGK+
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRYKVPEEPTEEEGDPGTWTDMDMRFRAFTGSGNRLDGKK 241
Query: 429 KKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
K +E P + +RGIP+Y+Y+ + F+RN +P
Sbjct: 242 K---GIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRP 278
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|26353928|dbj|BAC40594.1| unnamed protein product [Mus musculus]
Length = 307
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/279 (62%), Positives = 209/279 (74%), Gaps = 13/279 (4%)
Query: 198 FGFNMFPD-IPRPFNR----SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFHNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGAWFRVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGE-VGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 276
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|209737864|gb|ACI69801.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
gi|225705842|gb|ACO08767.1| Ubiquitin fusion degradation protein 1 homolog [Oncorhynchus
mykiss]
Length = 309
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 175/280 (62%), Positives = 208/280 (74%), Gaps = 13/280 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPE---KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKR 428
IIECDMNVDF P+GY EPE K E+ + DP F AF G+GNRLDGK+
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEGDPSTWTDMDMRFRAFTGSGNRLDGKK 241
Query: 429 KKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
K +E P + +RGIP+Y+Y+ + F+RN +P
Sbjct: 242 K---GIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRP 278
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|431904440|gb|ELK09825.1| Ubiquitin fusion degradation protein 1 like protein [Pteropus
alecto]
Length = 400
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 203/262 (77%), Gaps = 8/262 (3%)
Query: 210 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNP
Sbjct: 74 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 133
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY
Sbjct: 134 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 193
Query: 389 EPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REY 445
EPE+ + EE + D E GF AF G+GNRLDGK+K VE +P K +
Sbjct: 194 EPERQVQHEESTEGETDHSGYAGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDI 249
Query: 446 QRGIPHYDYEPNTLVFLRNIKP 467
+RGIP+Y+++ + F+RN +P
Sbjct: 250 KRGIPNYEFKLGKITFIRNSRP 271
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 74 HCGVLEFVADEGICYLPHW 92
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 18 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 77
Query: 144 LEL 146
LE
Sbjct: 78 LEF 80
>gi|225706076|gb|ACO08884.1| Ubiquitin fusion degradation protein 1 homolog [Osmerus mordax]
Length = 309
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/285 (61%), Positives = 211/285 (74%), Gaps = 23/285 (8%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEK--------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNR 423
IIECDMNVDF P+GY EPE+ +E+ + N +D+ GF AF G+GNR
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRPQHHEEPTEEEGDANSYADMDM-----GFRAFTGSGNR 236
Query: 424 LDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
LDGK K +E P + +RGIP+Y+Y+ + F+RN +P
Sbjct: 237 LDGKLK---GIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRP 278
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|226470046|emb|CAX70304.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 305
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/278 (58%), Positives = 202/278 (72%), Gaps = 11/278 (3%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAI+YN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGYTEPEKVKEKEEDNMI------DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGG 438
VGY + + DN+ D +++ GF AF GTG RLDGK K+ T ET
Sbjct: 188 VGYQSTDSGSLSKLDNVDAHQIEEDHIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNETNS 247
Query: 439 T----PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHK 472
P+K +RG+P+YDY+P +L F RN K S K
Sbjct: 248 DRPLGPSKNR-ERGVPNYDYQPGSLTFFRNSKLISTEK 284
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
R TH GVLEFVADEG++Y+PYW + +E GG + + +AL
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWML--------KNLHLEEGGLVSVVNAAL 110
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 146 LDGKRKKKDTVETGGT----PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFN 201
LDGK K+ T ET P+K +RG+P+YDY+P +L F RN K S K + F
Sbjct: 233 LDGKTKQDKTNETNSDRPLGPSKNR-ERGVPNYDYQPGSLTFFRNSKLISTEKTEESVFK 291
Query: 202 MF 203
F
Sbjct: 292 PF 293
>gi|229367492|gb|ACQ58726.1| Ubiquitin fusion degradation protein 1 homolog [Anoplopoma fimbria]
Length = 310
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/280 (60%), Positives = 207/280 (73%), Gaps = 13/280 (4%)
Query: 198 FGFNMFPD-----IPRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F F++F P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFHVFDHPMSRGFPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD++AINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE---DNMIDPVDLMPEPSGFVAFHGTGNRLDGKR 428
IIECDMNVDF P+GY EPE+ + +E + DP + GF AF G+GNRLDGK
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRPQHQEEPTEEEADPTNYADMDLGFRAFTGSGNRLDGKT 241
Query: 429 KKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
K +E P + +RGIP+Y+++ + F+RN KP
Sbjct: 242 K---GIEPSPVPLDPSDIKRGIPNYEFKVGRITFIRNSKP 278
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 5 IPRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+
Sbjct: 15 FPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNS 74
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R+TH GVLEFVADEG YLP+W
Sbjct: 75 DRMTHCGVLEFVADEGICYLPHW 97
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|260803421|ref|XP_002596588.1| hypothetical protein BRAFLDRAFT_122069 [Branchiostoma floridae]
gi|229281847|gb|EEN52600.1| hypothetical protein BRAFLDRAFT_122069 [Branchiostoma floridae]
Length = 241
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 186/241 (77%), Gaps = 6/241 (2%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F FGF F P FN Y+C+SVSM PGNER DVERGGKIIMPPSAL+QLTRLNI YPM
Sbjct: 2 FGFGFEGFQR-PTRFNTQYRCYSVSMLPGNERSDVERGGKIIMPPSALDQLTRLNIVYPM 60
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLTN++ R THSGVLEFVADEGKVYLPYWMMRNLL++EG ++ +E+ SLPVATFSKF
Sbjct: 61 LFKLTNKRANRETHSGVLEFVADEGKVYLPYWMMRNLLIEEGGILQVENASLPVATFSKF 120
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QPQ+ DFLDITNPKAVLEN LRNFACLT GD++AI YN K+YEL V+E KPG AV+IIEC
Sbjct: 121 QPQSEDFLDITNPKAVLENALRNFACLTKGDVVAITYNEKVYELHVMEVKPGQAVSIIEC 180
Query: 376 DMNVDFAPPVGYTEP--EKVKEKEEDNMIDPVDLMPE---PSGFVAFHGTGNRLDGKRKK 430
DMNV+FA PVGY EP +K +E E++ +D D PE F F G G L K +
Sbjct: 181 DMNVEFAAPVGYQEPVYKKKEETEQEMAVDEADFAPEGFLDDEFQPFTGEGQALRRKGGR 240
Query: 431 K 431
K
Sbjct: 241 K 241
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 71/81 (87%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
P FN Y+C+SVSM PGNER DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN++ R
Sbjct: 12 PTRFNTQYRCYSVSMLPGNERSDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNKRANR 71
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
THSGVLEFVADEGKVYLPYW
Sbjct: 72 ETHSGVLEFVADEGKVYLPYW 92
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM PGNER DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN++ R THSGVL
Sbjct: 19 YRCYSVSMLPGNERSDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNKRANRETHSGVL 78
Query: 145 EL 146
E
Sbjct: 79 EF 80
>gi|405972576|gb|EKC37338.1| Ubiquitin fusion degradation protein 1-like protein [Crassostrea
gigas]
Length = 692
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 205/281 (72%), Gaps = 16/281 (5%)
Query: 198 FGF-NMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
FGF MFP++ R FN++Y+C+SV+M ER+DVERGGKIIMPPSAL+QLTRL+I YPML
Sbjct: 387 FGFGQMFPEMGRSFNQTYRCYSVTML--GERDDVERGGKIIMPPSALDQLTRLHIQYPML 444
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
FKLTN+K R TH GVLEFVADEG++Y+PYWMM NLLL EG+L+ +E+VSL VATF++FQ
Sbjct: 445 FKLTNKKKNRETHCGVLEFVADEGRIYIPYWMMTNLLLTEGDLIQVENVSLKVATFARFQ 504
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKI---------YELCVLETKPG 367
PQ+ DFLDITNPKAVLEN LR+FACL++ D+I+I YN + Y+L VLETKP
Sbjct: 505 PQSVDFLDITNPKAVLENMLRSFACLSTDDVISIKYNERAIITDVWFQNYDLLVLETKPD 564
Query: 368 NAVTIIECDMNVDFAPPVGYTEPE--KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLD 425
AV+IIECDMNVDFAPPVGY EPE K + +E+ VD M S F F G GNRLD
Sbjct: 565 RAVSIIECDMNVDFAPPVGYKEPEFQKKTQGDEEMASAEVDHMDTDSSFKVFSGAGNRLD 624
Query: 426 GKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIK 466
GK+K + G +RGIP Y Y+ T+ F+R +
Sbjct: 625 GKKKGTEPAPVEGHSVAP--KRGIPDYGYKKGTIKFIRTAR 663
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP++ R FN++Y+C+SV+M ER+DVERGGKIIMPPSAL+QLTRL+I YPMLFKLTN
Sbjct: 392 MFPEMGRSFNQTYRCYSVTML--GERDDVERGGKIIMPPSALDQLTRLHIQYPMLFKLTN 449
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+K R TH GVLEFVADEG++Y+PYW
Sbjct: 450 KKKNRETHCGVLEFVADEGRIYIPYW 475
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 2/62 (3%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SV+M ER+DVERGGKIIMPPSAL+QLTRL+I YPMLFKLTN+K R TH GVL
Sbjct: 404 YRCYSVTML--GERDDVERGGKIIMPPSALDQLTRLHIQYPMLFKLTNKKKNRETHCGVL 461
Query: 145 EL 146
E
Sbjct: 462 EF 463
>gi|348527158|ref|XP_003451086.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Oreochromis niloticus]
Length = 310
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 200/262 (76%), Gaps = 6/262 (2%)
Query: 210 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 389 EPEKVKEKEE---DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREY 445
EPE+ ++ + DP +GF AF G+GNRLDGK K + P+ +
Sbjct: 199 EPERRPNHQDEPTEEETDPSSYADMDTGFRAFTGSGNRLDGKTKGIEPSPAPIAPS--DI 256
Query: 446 QRGIPHYDYEPNTLVFLRNIKP 467
+RGIP+YD++ + F+RN +P
Sbjct: 257 KRGIPNYDFKIGRITFIRNSRP 278
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|209737186|gb|ACI69462.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
Length = 309
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/281 (61%), Positives = 207/281 (73%), Gaps = 15/281 (5%)
Query: 198 FGFNMFPDIPRP------FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLN 250
F FNMF D P P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLN
Sbjct: 2 FSFNMF-DHPMPRTFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN 60
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVA 310
I YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VA
Sbjct: 61 ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA 120
Query: 311 TFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAV 370
T+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD++AINYN KIYEL V+ETKP AV
Sbjct: 121 TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV 180
Query: 371 TIIECDMNVDFAPPVGYTEPE---KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
+IIECDMNVDF P+GY EPE K E+ + DP F AF G+GNRLDGK
Sbjct: 181 SIIECDMNVDFDAPLGYKEPERCYKAPEEPTEEEGDPNTWTDMDMRFRAFTGSGNRLDGK 240
Query: 428 RKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
+K +E P + +RGIP+Y+Y+ + F+RN +P
Sbjct: 241 KK---GIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRP 278
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|392877780|gb|AFM87722.1| ubiquitin fusion degradation 1-like protein [Callorhinchus milii]
Length = 302
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/260 (60%), Positives = 200/260 (76%), Gaps = 4/260 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I YPMLFKL N++ R+TH
Sbjct: 14 FSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTH 73
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKF+PQ DFLDITNPK
Sbjct: 74 CGVLEFVAEEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFEPQAPDFLDITNPK 133
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+G E
Sbjct: 134 AVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDTAVSIIECDMNVDFDAPLGCKE 193
Query: 390 PEKVKEKEEDNMIDP--VDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQR 447
PE+ + E+ +DP + GF AF G+GNRLDGK+K + P + +R
Sbjct: 194 PERFSKHEDSLDLDPEEAAFLAADLGFRAFTGSGNRLDGKKKGVEPSPAHINP--EDIKR 251
Query: 448 GIPHYDYEPNTLVFLRNIKP 467
GIP+YD++ + F+RN +P
Sbjct: 252 GIPNYDFKIGKITFIRNSRP 271
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 67/78 (85%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I YPMLFKL N++ R+TH
Sbjct: 14 FSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTH 73
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG YLP+W
Sbjct: 74 CGVLEFVAEEGICYLPHW 91
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSMF G++R DVE+GGKIIMPPS+L+QL+RL+I YPMLFKL N++ R+TH GVL
Sbjct: 18 YRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|50539970|ref|NP_001002451.1| ubiquitin fusion degradation protein 1 homolog [Danio rerio]
gi|49619115|gb|AAT68142.1| ubiquitin fusion degradation 1-like protein [Danio rerio]
gi|49902820|gb|AAH76020.1| Ubiquitin fusion degradation 1-like [Danio rerio]
gi|157423585|gb|AAI53587.1| Ubiquitin fusion degradation 1-like [Danio rerio]
gi|169154400|emb|CAQ13301.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 308
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/282 (61%), Positives = 211/282 (74%), Gaps = 20/282 (7%)
Query: 198 FGFNMF-PDIPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF P + R F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFEPHVGRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPS------GFVAFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ + E +P + +PS GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERHMQHPE----EPAEEETDPSNYDMDLGFRAFTGSGNRLD 237
Query: 426 GKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 466
GK+K +E P + +RGIP+Y+++ + F+RN +
Sbjct: 238 GKKK---GIEPSPAPLDPSDIKRGIPNYEFKVGRITFIRNAR 276
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGFCYLPHW 97
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|47939988|gb|AAH72284.1| Unknown (protein for MGC:82436) [Xenopus laevis]
gi|56269190|gb|AAH87439.1| Unknown (protein for MGC:99253) [Xenopus laevis]
Length = 307
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 217/289 (75%), Gaps = 21/289 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+E L+ +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGVCYLPHWMMQNLLLEEEGLLQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP------VDLMPEPSGFVAFHGTGNRLD 425
IIECDMNVDF P+GY EP++ ++EE I+P DL GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPDRHTQQEEQTEIEPDHSEYAADL-----GFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTKRE-YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
GK+K ++ +P K E +RGIP+YD++ T+ F+RN +P + E
Sbjct: 237 GKKK---GIDPSPSPLKPEDIRRGIPNYDFKIGTITFIRNSRPQTKKVE 282
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGVCYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|56756593|gb|AAW26469.1| SJCHGC05907 protein [Schistosoma japonicum]
Length = 305
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/278 (58%), Positives = 201/278 (72%), Gaps = 11/278 (3%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLDLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAI+YN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGYTEPEKVKEKEEDNMI------DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGG 438
VGY + + DN+ D +++ GF AF GTG RLDGK K+ T ET
Sbjct: 188 VGYQSTDSGSLSKLDNVNAHQIEEDHIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNETNS 247
Query: 439 T----PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHK 472
P+K +RG+P+YDY P +L F RN K S K
Sbjct: 248 DRPLGPSKNR-ERGVPNYDYHPGSLTFFRNSKLISTEK 284
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 8/111 (7%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
R TH GVLEFVADEG++Y+PYW + D+E GG + + +AL
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWML--------KNLDLEEGGLVSVVNAAL 110
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 146 LDGKRKKKDTVETGGT----PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFN 201
LDGK K+ T ET P+K +RG+P+YDY P +L F RN K S K + F
Sbjct: 233 LDGKTKQDKTNETNSDRPLGPSKNR-ERGVPNYDYHPGSLTFFRNSKLISTEKTEESVFK 291
Query: 202 MF 203
F
Sbjct: 292 PF 293
>gi|47226555|emb|CAG08571.1| unnamed protein product [Tetraodon nigroviridis]
Length = 309
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/280 (61%), Positives = 207/280 (73%), Gaps = 12/280 (4%)
Query: 197 QFGFNMFP-DIPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLN 250
QF F +F I R F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLN
Sbjct: 1 QFSFQVFDHQISRAFQNRFSTQYRCYSVSMLEGPNDRSDVEKGGKIIMPPSALDHLSRLN 60
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVA 310
I YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VA
Sbjct: 61 ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA 120
Query: 311 TFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAV 370
T+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV
Sbjct: 121 TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV 180
Query: 371 TIIECDMNVDFAPPVGYTEPEKVKEKEED--NMIDPVDLMPEPSGFVAFHGTGNRLDGKR 428
+IIECDMNVDF P+GY EPE+ + +E+ D +GF AF G+GNRLDGK
Sbjct: 181 SIIECDMNVDFDAPLGYKEPERQPQHQEEPTEGEDASSYADMDTGFRAFTGSGNRLDGKT 240
Query: 429 KKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
K +E P + +RGIP+YD++ + F+RN +P
Sbjct: 241 K---GIEPSPAPLGPSDIKRGIPNYDFKIGRITFIRNSRP 277
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLEGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLEGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|225704124|gb|ACO07908.1| Ubiquitin fusion degradation protein 1 homolog [Oncorhynchus
mykiss]
Length = 309
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/281 (61%), Positives = 206/281 (73%), Gaps = 15/281 (5%)
Query: 198 FGFNMFPDIPRP------FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLN 250
F FNMF D P P F+ Y+ +SVSM G N+R DVE+GGKIIMPPSAL+QL+RLN
Sbjct: 2 FSFNMF-DHPMPRTFQNRFSTQYRRYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN 60
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVA 310
I YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VA
Sbjct: 61 ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA 120
Query: 311 TFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAV 370
T+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD++AINYN KIYEL V+ETKP AV
Sbjct: 121 TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNGKIYELRVMETKPDKAV 180
Query: 371 TIIECDMNVDFAPPVGYTEPE---KVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
+IIECDMNVDF P+GY EPE K E+ D DP F AF G+GNRLDGK
Sbjct: 181 SIIECDMNVDFDAPLGYKEPERCYKAPEEPTDEEGDPNTWTEMDMRFRAFTGSGNRLDGK 240
Query: 428 RKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
+K +E P + +RGIP+Y+Y+ + F+RN +P
Sbjct: 241 KK---GIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRP 278
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+ +SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRRYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y +SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRRYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|10998388|gb|AAG25922.1|AF233524_1 ubiquitin fusion degradation 1-like protein [Xenopus laevis]
Length = 305
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 216/289 (74%), Gaps = 21/289 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+E L+ +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGVCYLPHWMMQNLLLEEEGLLQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP------VDLMPEPSGFVAFHGTGNRLD 425
IIECDMNVDF P+GY EP++ ++EE I+P DL GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPDRHTQQEEQTEIEPDHSEYAADL-----GFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTKRE-YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
GK+K + +P K E +RGIP+YD++ T+ F+RN +P + E
Sbjct: 237 GKKK---GIGPSPSPLKPEGIRRGIPNYDFKIGTITFIRNSRPQTKKVE 282
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGVCYLPHW 97
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|55742511|ref|NP_001006806.1| ubiquitin fusion degradation protein 1 homolog [Xenopus (Silurana)
tropicalis]
gi|50370156|gb|AAH76680.1| ubiquitin fusion degradation 1 like [Xenopus (Silurana) tropicalis]
Length = 307
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/289 (62%), Positives = 217/289 (75%), Gaps = 21/289 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG L+ +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP------VDLMPEPSGFVAFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ ++EE I+P DL GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERHTQQEEPTEIEPDHSEYAADL-----GFRAFSGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTKRE-YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
GK+K ++ P K E +RGIP+YD++ T+ F+RN +P + E
Sbjct: 237 GKKK---GIDPSPFPLKPEDIRRGIPNYDFKIGTITFIRNSRPQAKKVE 282
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|410923016|ref|XP_003974978.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Takifugu
rubripes]
Length = 309
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/262 (62%), Positives = 199/262 (75%), Gaps = 7/262 (2%)
Query: 210 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKLTNKNSDRMT 78
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 389 EPEKVKEKEED--NMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REY 445
EPE+ + +E+ D +GF AF G+GNRLDGK K +E P +
Sbjct: 199 EPERQPQHQEEPTEGEDHSSYADMDTGFRAFTGSGNRLDGKTK---GIEPSPAPLDPSDI 255
Query: 446 QRGIPHYDYEPNTLVFLRNIKP 467
+RGIP+YD++ + F+RN KP
Sbjct: 256 KRGIPNYDFKIGRITFIRNSKP 277
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+ L+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|426393530|ref|XP_004063072.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Gorilla gorilla gorilla]
Length = 266
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 206/267 (77%), Gaps = 13/267 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE ++ D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTESEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYE 455
VE +P K + +RGIP+Y+++
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFK 264
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|147900383|ref|NP_001083638.1| ubiquitin fusion degradation protein 1 homolog [Xenopus laevis]
gi|38540890|gb|AAH61930.1| MGC68571 protein [Xenopus laevis]
Length = 307
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 218/289 (75%), Gaps = 21/289 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG L+ +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD++AINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP------VDLMPEPSGFVAFHGTGNRLD 425
IIECDMNVDF P+GY EPE+ ++EE +P VDL GF AF G+GNRLD
Sbjct: 182 IIECDMNVDFDAPLGYKEPERHTQQEEPTENEPDHSEYAVDL-----GFRAFTGSGNRLD 236
Query: 426 GKRKKKDTVETGGTPTKRE-YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
GK+K ++ +P K E +RGIP+YD++ T+ F+RN +P + E
Sbjct: 237 GKKK---GIDPSPSPLKPEDIRRGIPNYDFKIGTITFIRNSRPQAKKVE 282
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|241982785|ref|NP_001030324.2| ubiquitin fusion degradation protein 1 homolog isoform B [Homo
sapiens]
gi|332262707|ref|XP_003280401.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Nomascus leucogenys]
gi|397485940|ref|XP_003814094.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Pan paniscus]
Length = 266
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 205/267 (76%), Gaps = 13/267 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK 240
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYE 455
VE +P K + +RGIP+Y+++
Sbjct: 241 ---GVEPSPSPIKPGDIKRGIPNYEFK 264
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|353229817|emb|CCD75988.1| putative ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 292
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/275 (58%), Positives = 201/275 (73%), Gaps = 18/275 (6%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAINYN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGY----------TEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK--KKD 432
VGY + + + EED I V GF AF GTG RLDGK K K D
Sbjct: 188 VGYQPTDSSSSSKQSDKDLHQIEEDIKIPSV-----VQGFQAFSGTGYRLDGKNKQDKTD 242
Query: 433 TVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 466
+ G + + +E +RG+P+Y+Y+P +L F RN+K
Sbjct: 243 EADNGQSLGQLKERERGVPNYNYQPGSLTFFRNVK 277
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
R TH GVLEFVADEG++Y+PYW + +E GG + + +AL
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWML--------KNLHLEEGGLVSVVNAAL 110
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 146 LDGKRK--KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 188
LDGK K K D + G + + +E +RG+P+Y+Y+P +L F RN+K
Sbjct: 232 LDGKNKQDKTDEADNGQSLGQLKERERGVPNYNYQPGSLTFFRNVK 277
>gi|256078324|ref|XP_002575446.1| ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 376
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/275 (58%), Positives = 201/275 (73%), Gaps = 18/275 (6%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAINYN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGY----------TEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK--KKD 432
VGY + + + EED I V GF AF GTG RLDGK K K D
Sbjct: 188 VGYQPTDSSSSSKQSDKDLHQIEEDIKIPSV-----VQGFQAFSGTGYRLDGKNKQDKTD 242
Query: 433 TVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 466
+ G + + +E +RG+P+Y+Y+P +L F RN+K
Sbjct: 243 EADNGQSLGQLKERERGVPNYNYQPGSLTFFRNVK 277
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R TH GVLEFVADEG++Y+PYW
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYW 90
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 146 LDGKRK--KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 188
LDGK K K D + G + + +E +RG+P+Y+Y+P +L F RN+K
Sbjct: 232 LDGKNKQDKTDEADNGQSLGQLKERERGVPNYNYQPGSLTFFRNVK 277
>gi|440899628|gb|ELR50903.1| Ubiquitin fusion degradation protein 1-like protein, partial [Bos
grunniens mutus]
Length = 330
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/303 (58%), Positives = 212/303 (69%), Gaps = 37/303 (12%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 1 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 60
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW------------------------ 287
YPMLFKLTN+ R+TH GVLEFVADEG YLP+W
Sbjct: 61 TYPMLFKLTNKNSDRVTHCGVLEFVADEGICYLPHWVFPRFPPTTRPWPRPYCVPSAPFQ 120
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+
Sbjct: 121 MMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDV 180
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPV 405
IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE + D
Sbjct: 181 IAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQAQHEESAEGEADHS 240
Query: 406 DLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRN 464
E GF AF G+GNRLDGK+K VE +P + + +RGIP+Y+++ + F+RN
Sbjct: 241 GYTGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPVRPGDIKRGIPNYEFKLGKITFIRN 296
Query: 465 IKP 467
+P
Sbjct: 297 SRP 299
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVT 77
Query: 68 HSGVLEFVADEGKVYLPYWCF 88
H GVLEFVADEG YLP+W F
Sbjct: 78 HCGVLEFVADEGICYLPHWVF 98
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 22 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVTHCGV 81
Query: 144 LEL 146
LE
Sbjct: 82 LEF 84
>gi|402883575|ref|XP_003905288.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Papio
anubis]
Length = 381
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 214/303 (70%), Gaps = 17/303 (5%)
Query: 178 PNTLVFLRNIKPASAHKEFQFGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVE 231
P T V L S F FNMF IPR F NR Y+CFSVSM G N+R DVE
Sbjct: 52 PGTFVVLPERSGVSEVVSIMFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVE 111
Query: 232 RGGKIIMPPSALEQLTRLNIC----YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
+GGKIIMPPSAL+QL++ + YP++ K+TN+ R+TH GVLEFVADEG YLP+W
Sbjct: 112 KGGKIIMPPSALDQLSKYLLSDLRTYPLIHKMTNKNSDRMTHCGVLEFVADEGICYLPHW 171
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+
Sbjct: 172 MMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDV 231
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPV 405
IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE + D
Sbjct: 232 IAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHS 291
Query: 406 DLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRN 464
E GF AF G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN
Sbjct: 292 GYAGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRN 347
Query: 465 IKP 467
+P
Sbjct: 348 SRP 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNIC----YPMLFKLTNQKM 63
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL++ + YP++ K+TN+
Sbjct: 89 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSKYLLSDLRTYPLIHKMTNKNS 148
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R+TH GVLEFVADEG YLP+W
Sbjct: 149 DRMTHCGVLEFVADEGICYLPHW 171
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNIC----YPMLFKLTNQKMGRIT 139
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL++ + YP++ K+TN+ R+T
Sbjct: 93 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSKYLLSDLRTYPLIHKMTNKNSDRMT 152
Query: 140 HSGVLEL 146
H GVLE
Sbjct: 153 HCGVLEF 159
>gi|29840998|gb|AAP06011.1| similar to GenBank Accession Number AF228284 ubiquitin
fusion-degradation 1-like protein in Gallus gallus
[Schistosoma japonicum]
Length = 285
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 193/262 (73%), Gaps = 11/262 (4%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAI+YN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGYTEPEKVKEKEEDNMI------DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGG 438
VGY + + DN+ D +++ GF AF GTG RLDGK K+ T ET
Sbjct: 188 VGYQSTDSGSLSKLDNVDAHQIEEDHIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNETNS 247
Query: 439 T----PTKREYQRGIPHYDYEP 456
P+K +RG+P+YDY P
Sbjct: 248 DRPLGPSKNR-ERGVPNYDYHP 268
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
R TH GVLEFVADEG++Y+PYW + +E GG + + +AL
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWML--------KNLHLEEGGLVSVVNAAL 110
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
>gi|1654346|gb|AAD08720.1| ubiquitin fusion-degradation 1 like protein [Homo sapiens]
Length = 343
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 176/315 (55%), Positives = 210/315 (66%), Gaps = 49/315 (15%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE--------------- 296
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+E
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEDGLVQLETVNLQVAT 121
Query: 297 ---------------------GELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENC 335
G LV +ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN
Sbjct: 122 YSKSKFCYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSADFLDITNPKAVLENA 181
Query: 336 LRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKE 395
LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+I ECDMNVDF P+GY EPE+ +
Sbjct: 182 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIHECDMNVDFDAPLGYKEPERQVQ 241
Query: 396 KEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHY 452
EE + D E GF AF G+GNRLDGK+K VE +P K + +RGIP+Y
Sbjct: 242 HEESTEGEADHSGYAGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNY 297
Query: 453 DYEPNTLVFLRNIKP 467
+++ + F+RN +P
Sbjct: 298 EFKLGKITFIRNSRP 312
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 69/87 (79%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|417398548|gb|JAA46307.1| Putative ubiquitin fusion degradation protein 1 [Desmodus rotundus]
Length = 298
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/278 (61%), Positives = 201/278 (72%), Gaps = 20/278 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC 252
F FNMF IPR F NR Y+CFSVSM G IMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPN--------XXIMPPSALDQLSRLNIT 53
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATF 312
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+
Sbjct: 54 YPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATY 113
Query: 313 SKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTI 372
SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+I
Sbjct: 114 SKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSI 173
Query: 373 IECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
IECDMNVDF P+GY EPE+ + EE D D E GF AF G+GNRLDGK+K
Sbjct: 174 IECDMNVDFDAPLGYKEPERQVQHEESTDGEADHSGYAGE-LGFRAFSGSGNRLDGKKK- 231
Query: 431 KDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 232 --GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 267
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 55/78 (70%), Gaps = 8/78 (10%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+CFSVSM G IMPPSAL+QL+RLNI YPMLFKLTN+ R+TH
Sbjct: 19 FSTQYRCFSVSMLAGPN--------XXIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTH 70
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVADEG YLP+W
Sbjct: 71 CGVLEFVADEGICYLPHW 88
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 41/62 (66%), Gaps = 8/62 (12%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVSM G IMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GVL
Sbjct: 23 YRCFSVSMLAGPN--------XXIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|156374459|ref|XP_001629824.1| predicted protein [Nematostella vectensis]
gi|156216833|gb|EDO37761.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/283 (56%), Positives = 200/283 (70%), Gaps = 15/283 (5%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FGFNMF +PR F Y+C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLF
Sbjct: 2 FGFNMFEPMPRVFKTQYRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KLTN ++ R TH GVLEFVADEGK+YLP+WMMRN+LLDEG L+ +ES SLPVA+F+KFQP
Sbjct: 62 KLTNNRIDRSTHCGVLEFVADEGKIYLPHWMMRNMLLDEGGLLQVESASLPVASFAKFQP 121
Query: 318 QTCDFLDITNPKAVL-ENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
Q+ DFLDITNPKAVL C + D ++ + +IYE V+ETKPG AV+IIECD
Sbjct: 122 QSVDFLDITNPKAVLGMYCTVVLVTASYFDCCSLFLSPQIYEFLVMETKPGKAVSIIECD 181
Query: 377 MNVDFAPPVGYTEP----EKVKEKEEDNMIDPVDLMPEPSGFV---AFHGTGNRLDGKRK 429
M V+FA PVGY EP ++VK+ EE++ P P+ V AF G G RLDGK+K
Sbjct: 182 MQVEFAAPVGYVEPKRQQQQVKKMEEESE------EPHPAAQVTKLAFTGEGFRLDGKKK 235
Query: 430 KKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNI-KPASAH 471
K + +RGIP+YDY+ + F RN KP+++
Sbjct: 236 KMNVSSEPVPLEPVVIKRGIPNYDYKKGKITFKRNFYKPSNSQ 278
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 74/86 (86%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MF +PR F Y+C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN
Sbjct: 6 MFEPMPRVFKTQYRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTN 65
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
++ R TH GVLEFVADEGK+YLP+W
Sbjct: 66 NRIDRSTHCGVLEFVADEGKIYLPHW 91
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN ++ R TH GVL
Sbjct: 18 YRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRSTHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|198430047|ref|XP_002122249.1| PREDICTED: similar to ubiquitin fusion degradation 1-like [Ciona
intestinalis]
Length = 315
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 200/284 (70%), Gaps = 12/284 (4%)
Query: 194 KEFQFGFNMFPDIPRPFNRSYKCFSVSM--FPGNEREDVERGGKIIMPPSALEQLTRLNI 251
++F FNM P F+ Y+C+S S + +D+++GGKIIMPPSAL+QL+RLNI
Sbjct: 3 QDFLNEFNMGARRPNTFSNGYRCYSSSFGALSDQKSKDIQKGGKIIMPPSALDQLSRLNI 62
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN GR TH GVLEFVA+EG +YLPYWMM+NLLL EG+LV +E+ +LPVAT
Sbjct: 63 SYPMLFKLTNSPKGRSTHCGVLEFVAEEGVIYLPYWMMQNLLLGEGDLVQLENCTLPVAT 122
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+++FQPQ+ DF DI+NPKAVLEN LRNFACLT DMIAI YNS+ YELCV E +P NAV
Sbjct: 123 YARFQPQSTDFHDISNPKAVLENALRNFACLTKSDMIAIQYNSRQYELCVQEVRPQNAVC 182
Query: 372 IIECDMNVDFAPPVGYTEP-EKVKEKEEDNMIDPVDL-------MPEPSGFVAFHGTGNR 423
IIECD++++F PVGY P K K+ E D ++ D+ M E SGF AF GTGNR
Sbjct: 183 IIECDISLEFDAPVGYEPPVPKPKQVESDMIVGTPDMKKAIEEYMKETSGFSAFEGTGNR 242
Query: 424 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKP 467
LDGK+K+ T + +RG+P+Y ++ L F+RN +P
Sbjct: 243 LDGKKKR--TRQKKVEIDVSNIERGVPNYKWKFGQLTFIRNNEP 284
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 6 PRPFNRSYKCFSVSM--FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
P F+ Y+C+S S + +D+++GGKIIMPPSAL+QL+RLNI YPMLFKLTN
Sbjct: 16 PNTFSNGYRCYSSSFGALSDQKSKDIQKGGKIIMPPSALDQLSRLNISYPMLFKLTNSPK 75
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
GR TH GVLEFVA+EG +YLPYW
Sbjct: 76 GRSTHCGVLEFVAEEGVIYLPYW 98
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Query: 85 YWCFSVSM--FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSG 142
Y C+S S + +D+++GGKIIMPPSAL+QL+RLNI YPMLFKLTN GR TH G
Sbjct: 23 YRCYSSSFGALSDQKSKDIQKGGKIIMPPSALDQLSRLNISYPMLFKLTNSPKGRSTHCG 82
Query: 143 VLEL 146
VLE
Sbjct: 83 VLEF 86
>gi|351715455|gb|EHB18374.1| Ubiquitin fusion degradation protein 1-like protein [Heterocephalus
glaber]
Length = 296
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/279 (60%), Positives = 202/279 (72%), Gaps = 24/279 (8%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGK +RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGK-----------SRLNI 50
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 51 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 110
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 111 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 170
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
IIECDMNVDF P+GY EPE+ + EE +N D E GF AF G+GNRLDGK+K
Sbjct: 171 IIECDMNVDFDAPLGYKEPERQVQHEESTENEADHSGYAGE-LGFRAFSGSGNRLDGKKK 229
Query: 430 KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 230 ---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 265
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 59/87 (67%), Gaps = 16/87 (18%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGK +RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLT 59
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 60 NKNSDRMTHCGVLEFVADEGICYLPHW 86
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 41/63 (65%), Gaps = 12/63 (19%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGK +RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLTNKNSDRMTHCGV 71
Query: 144 LEL 146
LE
Sbjct: 72 LEF 74
>gi|196010571|ref|XP_002115150.1| hypothetical protein TRIADDRAFT_28674 [Trichoplax adhaerens]
gi|190582533|gb|EDV22606.1| hypothetical protein TRIADDRAFT_28674, partial [Trichoplax
adhaerens]
Length = 292
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/261 (59%), Positives = 197/261 (75%), Gaps = 3/261 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
+N S +C+SVSM P + RE+++ GGKII+PPSAL+ LTRLNI YPMLFK+TN++ R TH
Sbjct: 1 YNTSLRCYSVSMMP-DSREELDNGGKIILPPSALDILTRLNIVYPMLFKITNKQSDRSTH 59
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVADEGK+Y+PYWMMRNLL+ EG+LV IES SLPVAT+SKFQP + DFLDITN K
Sbjct: 60 CGVLEFVADEGKMYIPYWMMRNLLVSEGDLVRIESASLPVATYSKFQPFSVDFLDITNHK 119
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLEN LR+FACLT GD++AI YN K+YEL V+ETKPG AV+IIECDM+V+FAPP+ Y E
Sbjct: 120 AVLENALRSFACLTKGDVVAIKYNDKVYELLVMETKPGQAVSIIECDMSVEFAPPIDYKE 179
Query: 390 PEK-VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRG 448
P++ +KE+E++ + + F F G G+R+DGK+KK P K RG
Sbjct: 180 PQRNIKEEEKEEEDESEIFEEDEDEFKIFGGEGHRIDGKKKKSAATSAVSVP-KELKNRG 238
Query: 449 IPHYDYEPNTLVFLRNIKPAS 469
IP+YDY+ L F+R K A+
Sbjct: 239 IPNYDYKIGNLKFIRPKKCAN 259
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
+N S +C+SVSM P + RE+++ GGKII+PPSAL+ LTRLNI YPMLFK+TN++ R TH
Sbjct: 1 YNTSLRCYSVSMMP-DSREELDNGGKIILPPSALDILTRLNIVYPMLFKITNKQSDRSTH 59
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVADEGK+Y+PYW
Sbjct: 60 CGVLEFVADEGKMYIPYW 77
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
C+SVSM P + RE+++ GGKII+PPSAL+ LTRLNI YPMLFK+TN++ R TH GVLE
Sbjct: 7 CYSVSMMP-DSREELDNGGKIILPPSALDILTRLNIVYPMLFKITNKQSDRSTHCGVLEF 65
>gi|391346786|ref|XP_003747649.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Metaseiulus occidentalis]
Length = 300
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/267 (54%), Positives = 185/267 (69%), Gaps = 1/267 (0%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F + F DI R F Y+ FSVSM GNER+++E+G K+I+PPS L+ L+RLNI YP+LF
Sbjct: 2 FNLDHFQDIHRKFTAEYRAFSVSMLCGNERQNLEQGNKVILPPSTLDMLSRLNITYPILF 61
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
K+ N+++ R TH GVLEF ADEGK YLPYWMM+ L LDEG+ + +E+ LPV F+KFQ
Sbjct: 62 KVENRRLKRDTHCGVLEFSADEGKCYLPYWMMKYLCLDEGDHLYVENTQLPVGNFAKFQA 121
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
Q+ DFLDITNPKAVLEN LR+FACLT+ D I I YN K YELCVLET+PG A+ I ECD+
Sbjct: 122 QSVDFLDITNPKAVLENSLRHFACLTANDTIVIKYNDKQYELCVLETRPGPAIDIHECDL 181
Query: 378 NVDFAPPVGYTEPEKVK-EKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
NV+FA PVGY EPE K +EE + P ++ F AF G+GNR+DGK K D
Sbjct: 182 NVEFAAPVGYQEPETKKVSQEEIDFKKPEVIVDTKKAFQAFAGSGNRIDGKAKNLDASVA 241
Query: 437 GGTPTKREYQRGIPHYDYEPNTLVFLR 463
G E +RG+P ++ + F+R
Sbjct: 242 QGNLQAAEIERGVPDDRWKLGQINFIR 268
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F DI R F Y+ FSVSM GNER+++E+G K+I+PPS L+ L+RLNI YP+LFK+ N+
Sbjct: 7 FQDIHRKFTAEYRAFSVSMLCGNERQNLEQGNKVILPPSTLDMLSRLNITYPILFKVENR 66
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
++ R TH GVLEF ADEGK YLPYW
Sbjct: 67 RLKRDTHCGVLEFSADEGKCYLPYW 91
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 80 KVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 139
K Y FSVSM GNER+++E+G K+I+PPS L+ L+RLNI YP+LFK+ N+++ R T
Sbjct: 13 KFTAEYRAFSVSMLCGNERQNLEQGNKVILPPSTLDMLSRLNITYPILFKVENRRLKRDT 72
Query: 140 HSGVLELDGKRKK 152
H GVLE K
Sbjct: 73 HCGVLEFSADEGK 85
>gi|226489142|emb|CAX74920.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 256
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 180/238 (75%), Gaps = 6/238 (2%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R TH GVLEFVADEG++Y+PYWM++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLD
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLD 127
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPKAVLEN LR+FACLT GD+IAI+YN +IYEL VLETKP +AVTIIECDM+VDFAPP
Sbjct: 128 ISNPKAVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPP 187
Query: 385 VGYTEPEKVKEKEEDNMI------DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
VGY + + DN+ D +++ GF AF GTG RLDGK K+ T ET
Sbjct: 188 VGYQSTDSGSLSKLDNVDAHQIEEDHIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNET 245
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D PF SY+C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+
Sbjct: 8 DNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQA 67
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
R TH GVLEFVADEG++Y+PYW + +E GG + + +AL
Sbjct: 68 NRTTHCGVLEFVADEGRIYVPYWML--------KNLHLEEGGLVSVVNAAL 110
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS N R VE+GGKIIMPPSAL+ LTRLN+ YPMLFKLTNQ+ R TH GVL
Sbjct: 17 YRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTHCGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
>gi|115496962|ref|NP_001068768.1| ubiquitin fusion degradation protein 1 homolog [Bos taurus]
gi|112362255|gb|AAI20442.1| Ubiquitin fusion degradation 1 like [Bos taurus]
gi|296478270|tpg|DAA20385.1| TPA: ubiquitin fusion degradation 1 like [Bos taurus]
Length = 231
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 171/207 (82%), Gaps = 6/207 (2%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRVTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE 398
IIECDMNVDF P+GY EPE+ + EE
Sbjct: 182 IIECDMNVDFDAPLGYKEPERQAQHEE 208
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRVTHCGVLEFVADEGICYLPHW 97
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|229365840|gb|ACQ57900.1| Ubiquitin fusion degradation protein 1 homolog [Anoplopoma fimbria]
Length = 239
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/230 (63%), Positives = 176/230 (76%), Gaps = 9/230 (3%)
Query: 198 FGFNMFPD-----IPRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F F++F P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFHVFDHPMSRGFPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD++AINYN KIYEL V+ETKP AV+
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE---DNMIDPVDLMPEPSGFVAFH 418
IIECDMNVDF P+GY EPE+ + +E + DP + G +FH
Sbjct: 182 IIECDMNVDFDAPLGYKEPERRPQHQEEPTEEEADPTNYADMDLGVQSFH 231
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 5 IPRPFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
P F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+
Sbjct: 15 FPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNS 74
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R+TH GVLEFVADEG YLP+W
Sbjct: 75 DRMTHCGVLEFVADEGICYLPHW 97
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|344241479|gb|EGV97582.1| Protein HIRA [Cricetulus griseus]
Length = 1007
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 188/258 (72%), Gaps = 23/258 (8%)
Query: 206 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 260
IPR F NR Y+CFS SM G N+R DVE+GGK +RLNI YPMLFKLT
Sbjct: 6 IPRVFQNRFSTQYRCFSASMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLT 54
Query: 261 NQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
N+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+
Sbjct: 55 NKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSP 114
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVD 380
DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVD
Sbjct: 115 DFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVD 174
Query: 381 FAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGG 438
F P+GY EPE+ + EE + D E GF AF G+GNRLDGK+K VE
Sbjct: 175 FDAPLGYKEPERPVQHEESIEGEADHSGYTGE-VGFRAFSGSGNRLDGKKKG---VEPSP 230
Query: 439 TPTK-REYQRGIPHYDYE 455
+P K + +RGIP+Y+++
Sbjct: 231 SPIKPGDIKRGIPNYEFK 248
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 58/87 (66%), Gaps = 16/87 (18%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFS SM G N+R DVE+GGK +RLNI YPMLFKLT
Sbjct: 6 IPRVFQNRFSTQYRCFSASMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLT 54
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 55 NKNSDRMTHCGVLEFVADEGICYLPHW 81
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 12/63 (19%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFS SM G N+R DVE+GGK +RLNI YPMLFKLTN+ R+TH GV
Sbjct: 18 YRCFSASMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLTNKNSDRMTHCGV 66
Query: 144 LEL 146
LE
Sbjct: 67 LEF 69
>gi|313225424|emb|CBY06898.1| unnamed protein product [Oikopleura dioica]
Length = 326
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 198/290 (68%), Gaps = 16/290 (5%)
Query: 198 FGFNMFPDIPRP------FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNI 251
F FN +P P F+R + +SV M PGNER DV GGKIIMPPS+LE L+RLNI
Sbjct: 12 FYFNRQGGVPMPRGMRSTFSREFAAYSVMMMPGNERPDVNAGGKIIMPPSSLETLSRLNI 71
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
+PMLFKL N+ R TH+GVLEF+A+EGKVYLP WMMRNL+L+EG+ + I SLPVA+
Sbjct: 72 SFPMLFKLENRSKERQTHAGVLEFIAEEGKVYLPGWMMRNLVLNEGDRIAITYASLPVAS 131
Query: 312 FSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
+SKF+PQ+CDFL+I+NPKAVLE LR+FACL+ GD+I+I+Y + +E+ ++ETKP +AV
Sbjct: 132 YSKFKPQSCDFLEISNPKAVLEKHLRSFACLSKGDIISIDYIGREFEVQIVETKPEDAVN 191
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKEE--------DNMIDPVDLMPEPSGFVAFHGTGNR 423
IIECDMNVDF PVGY EPE+V+ EE D VD + + F +F G G R
Sbjct: 192 IIECDMNVDFEAPVGYKEPERVQPPEETPGSFGTPDIQKKLVDYYEKQTNFHSFQGKGGR 251
Query: 424 LDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
+D +KK + Y+RG+P+YD++ TL ++ + KP + +E
Sbjct: 252 ID-GKKKGTKGVKKAIDLDQIYKRGVPNYDWDGRTLHYI-HTKPKTKTEE 299
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 62/78 (79%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+R + +SV M PGNER DV GGKIIMPPS+LE L+RLNI +PMLFKL N+ R TH
Sbjct: 30 FSREFAAYSVMMMPGNERPDVNAGGKIIMPPSSLETLSRLNISFPMLFKLENRSKERQTH 89
Query: 69 SGVLEFVADEGKVYLPYW 86
+GVLEF+A+EGKVYLP W
Sbjct: 90 AGVLEFIAEEGKVYLPGW 107
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ +SV M PGNER DV GGKIIMPPS+LE L+RLNI +PMLFKL N+ R TH+GVL
Sbjct: 34 FAAYSVMMMPGNERPDVNAGGKIIMPPSSLETLSRLNISFPMLFKLENRSKERQTHAGVL 93
Query: 145 ELDGKRKK 152
E + K
Sbjct: 94 EFIAEEGK 101
>gi|444724101|gb|ELW64720.1| Ubiquitin fusion degradation protein 1 like protein [Tupaia
chinensis]
Length = 327
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/299 (54%), Positives = 197/299 (65%), Gaps = 33/299 (11%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLT----- 247
F FNMF IPR F NR Y+CFSVSM G + ++ P + + T
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDSRQQSSLRMWGPEAGVTAKTFPIPD 61
Query: 248 -----RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNI 302
RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +
Sbjct: 62 LLSGGRLNITYPMLFKLTNKNSDRVTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQV 121
Query: 303 ESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVL 362
ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+
Sbjct: 122 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 181
Query: 363 ETKPGNAVTIIECDMN-----------VDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMP 409
ETKP AV+IIECDMN VDF P+GY EPE+ + EE D D
Sbjct: 182 ETKPDKAVSIIECDMNVSGSVCFRQARVDFDAPLGYKEPERQAQHEESTDGEADHGGYAG 241
Query: 410 EPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
E GF AF G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 242 E-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRP 296
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 14/96 (14%)
Query: 5 IPRPF-NR---SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLT----------RLNI 50
IPR F NR Y+CFSVSM G + ++ P + + T RLNI
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDSRQQSSLRMWGPEAGVTAKTFPIPDLLSGGRLNI 70
Query: 51 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
YPMLFKLTN+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 TYPMLFKLTNKNSDRVTHCGVLEFVADEGICYLPHW 106
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLT----------RLNICYPMLFKLTNQK 134
Y CFSVSM G + ++ P + + T RLNI YPMLFKLTN+
Sbjct: 23 YRCFSVSMLAGPNDSRQQSSLRMWGPEAGVTAKTFPIPDLLSGGRLNITYPMLFKLTNKN 82
Query: 135 MGRITHSGVLEL 146
R+TH GVLE
Sbjct: 83 SDRVTHCGVLEF 94
>gi|340374671|ref|XP_003385861.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Amphimedon queenslandica]
Length = 324
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 181/264 (68%), Gaps = 11/264 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++KC+S+ F + + D + GGKII+PPSALE+L RLNI YPMLF+LTN + R TH
Sbjct: 25 FCDNFKCYSMVYF-SSAKVDADHGGKIILPPSALERLARLNITYPMLFRLTNDMINRHTH 83
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG+VY+P WM+ +L+ + G L+ IE+V+LP+ATFSKFQPQ+ DFLDI+NPK
Sbjct: 84 CGVLEFSAEEGRVYVPKWMLGHLMAEAGHLLKIENVTLPLATFSKFQPQSVDFLDISNPK 143
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LR FACLT GD+I INYN K YEL VLET+P NAV+IIECDM VDFA PVGY E
Sbjct: 144 AVLELKLRLFACLTKGDVIQINYNEKNYELLVLETQPNNAVSIIECDMKVDFAAPVGYKE 203
Query: 390 PEKVK-----EKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
P+ V+ + +E + D F AF G G RLDGK KK + P K++
Sbjct: 204 PQPVEPMETVDHDEQSTYDATTTELPTKEFKAFSGQGQRLDGKVKKSNDSNQTQLPQKQQ 263
Query: 445 Y-----QRGIPHYDYEPNTLVFLR 463
+RGIP+Y+Y + F R
Sbjct: 264 VTQSKRERGIPNYNYVKGRITFAR 287
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++KC+S+ F + + D + GGKII+PPSALE+L RLNI YPMLF+LTN + R TH
Sbjct: 25 FCDNFKCYSMVYF-SSAKVDADHGGKIILPPSALERLARLNITYPMLFRLTNDMINRHTH 83
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG+VY+P W
Sbjct: 84 CGVLEFSAEEGRVYVPKW 101
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ C+S+ F + + D + GGKII+PPSALE+L RLNI YPMLF+LTN + R TH GVL
Sbjct: 29 FKCYSMVYF-SSAKVDADHGGKIILPPSALERLARLNITYPMLFRLTNDMINRHTHCGVL 87
Query: 145 ELDGK 149
E +
Sbjct: 88 EFSAE 92
>gi|183448198|pdb|2YUJ|A Chain A, Solution Structure Of Human Ubiquitin Fusion Degradation
Protein 1 Homolog Ufd1
Length = 190
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 155/181 (85%), Gaps = 5/181 (2%)
Query: 206 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 260
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 8 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 67
Query: 261 NQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
N+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT+SKFQPQ+
Sbjct: 68 NKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSP 127
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVD 380
DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVD
Sbjct: 128 DFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVD 187
Query: 381 F 381
F
Sbjct: 188 F 188
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 8 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 67
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 68 NKNSDRMTHCGVLEFVADEGICYLPHW 94
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 20 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 79
Query: 144 LEL 146
LE
Sbjct: 80 LEF 82
>gi|12849353|dbj|BAB28306.1| unnamed protein product [Mus musculus]
Length = 267
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/230 (61%), Positives = 175/230 (76%), Gaps = 8/230 (3%)
Query: 241 SALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELV 300
SAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFV + ++LP+WMM+NLLL+EG LV
Sbjct: 12 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVLMK-HLFLPHWMMQNLLLEEGGLV 70
Query: 301 NIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELC 360
+ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIYEL
Sbjct: 71 QVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 130
Query: 361 VLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPVDLMPEPSGFVAFH 418
V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE + D E GF AF
Sbjct: 131 VMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGE-VGFRAFS 189
Query: 419 GTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIKP 467
G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN +P
Sbjct: 190 GSGNRLDGKKK---GVEPSPSPIKPGDIRRGIPNYEFKLGKITFIRNSRP 236
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 40 SALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
SAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFV + ++LP+W
Sbjct: 12 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVLMK-HLFLPHW 57
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 112 SALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
SAL+QL+RLNI YPMLFKLTN+ R+TH GVLE
Sbjct: 12 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEF 46
>gi|355737765|gb|AES12423.1| ubiquitin fusion degradation 1-like protein [Mustela putorius furo]
Length = 179
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 139/161 (86%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
MPPSAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG
Sbjct: 1 MPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEG 60
Query: 298 ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIY 357
LV +ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+IAINYN KIY
Sbjct: 61 GLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIY 120
Query: 358 ELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE 398
EL V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE
Sbjct: 121 ELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEE 161
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
MPPSAL+QL+RLNI YPMLFKLTN+ R+TH GVLEFVADEG YLP+W
Sbjct: 1 MPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHW 50
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 109 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
MPPSAL+QL+RLNI YPMLFKLTN+ R+TH GVLE
Sbjct: 1 MPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEF 38
>gi|296808985|ref|XP_002844831.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
gi|238844314|gb|EEQ33976.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
Length = 376
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 166/267 (62%), Gaps = 33/267 (12%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 9 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQRM 68
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV I+S LP + K Q Q+ FLDI++
Sbjct: 69 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSRIKLQAQSTSFLDISD 128
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 129 PKAVLENAFRNFSCLTKGDVFTFSYNDQIYEMAVLETKPETSQNALSVLETDLEVDFAPP 188
Query: 385 VGYTEPEKVKEKE------------EDNMIDPVDLMPEPSGFVA---------------- 416
VGY EP++V + M + + A
Sbjct: 189 VGYEEPKRVSGASTPSSSVVSGSLPSGGTLHSHGTMAQSINYAAIAPGSNDAVRAANAAS 248
Query: 417 --FHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 249 SNFHGSGQRLNMKKGSKSSTPKSTTPA 275
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 9 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQRM 68
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 69 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGD 99
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 15 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQRMTHAGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|449461623|ref|XP_004148541.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
gi|449520152|ref|XP_004167098.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 322
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 159/220 (72%), Gaps = 6/220 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+CFS S ++ +E G +IIMPPSAL++L L I YPMLF+L N + R++H
Sbjct: 13 FEQSYQCFSTSFI---DKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG +Y+PYWMM N++L EG+LV +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFVAEEGMIYMPYWMMENMVLQEGDLVRVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKV--KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK+ K ++ + + D EP F AF GTG RLDGK
Sbjct: 190 PEKLVAPTKGKEQVAEAPDSEAEPK-FSAFTGTGRRLDGK 228
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+CFS S ++ +E G +IIMPPSAL++L L I YPMLF+L N + R++H
Sbjct: 13 FEQSYQCFSTSFI---DKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG +Y+PYW
Sbjct: 70 CGVLEFVAEEGMIYMPYW 87
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFS S ++ +E G +IIMPPSAL++L L I YPMLF+L N + R++H GVL
Sbjct: 17 YQCFSTSFI---DKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|312075778|ref|XP_003140568.1| ubiquitin fusion degradation protein UFD1 containing protein [Loa
loa]
gi|307764267|gb|EFO23501.1| ubiquitin fusion degradation protein UFD1 containing protein [Loa
loa]
Length = 321
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 170/278 (61%), Gaps = 13/278 (4%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYP 254
FG MF RPF+ +CFS + + G + + ++ GGKI++PPSAL+ L RLNI YP
Sbjct: 5 FGAMMFGAPVRPFDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYP 64
Query: 255 MLFKLTN-QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
M+F++ N G TH GVLEF+A+EG+ YLP WMMR L L+EGE V I +LP AT++
Sbjct: 65 MMFRVQNLSDSGYSTHCGVLEFLAEEGRCYLPSWMMRQLHLNEGECVRITYATLPKATYT 124
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
K +PQ+ DFL I+NP+AVLE LR FACLT GD+IA+ YN +I E V+E KPG AV+II
Sbjct: 125 KLKPQSTDFLAISNPRAVLEVELRKFACLTKGDIIAVEYNDQILEFLVMEVKPGRAVSII 184
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMP--------EPSGFVAFHGTGNRLD 425
ECDMNV+F P GY EP N + P SGF AF GTG+RLD
Sbjct: 185 ECDMNVEFDAPEGYVEP-NTNAASSSNATPSMSSTPVVNETGIKAGSGFKAFTGTGHRLD 243
Query: 426 GKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
GK K T T R + + + +Y P L F+R
Sbjct: 244 GKLKSSTTSLTEMEAAVRSLPQLVVNTNYIPGKLEFVR 281
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFK 57
MF RPF+ +CFS + + G + + ++ GGKI++PPSAL+ L RLNI YPM+F+
Sbjct: 9 MFGAPVRPFDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPMMFR 68
Query: 58 LTN-QKMGRITHSGVLEFVADEGKVYLPYW 86
+ N G TH GVLEF+A+EG+ YLP W
Sbjct: 69 VQNLSDSGYSTHCGVLEFLAEEGRCYLPSW 98
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 83 LPYWCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRI 138
L CFS + + G + + ++ GGKI++PPSAL+ L RLNI YPM+F++ N G
Sbjct: 19 LQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPMMFRVQNLSDSGYS 78
Query: 139 THSGVLEL 146
TH GVLE
Sbjct: 79 THCGVLEF 86
>gi|224059470|ref|XP_002299862.1| predicted protein [Populus trichocarpa]
gi|222847120|gb|EEE84667.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 155/227 (68%), Gaps = 3/227 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H
Sbjct: 6 FEQSYRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 62
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+ADEG +YLPYWMM N+LL EG++V + + SL TF K QP T DFLDI+NPK
Sbjct: 63 CGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPK 122
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++E KP +A++IIE D VDFAPP+ Y E
Sbjct: 123 AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFAPPLDYKE 182
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
PEK K N I P + + F AF G+ RLDGK + T T
Sbjct: 183 PEKPKSIPRSNKIPPEEPAAKMPRFSAFTGSARRLDGKPATQPTAST 229
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H
Sbjct: 6 FEQSYRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 62
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+ADEG +YLPYW
Sbjct: 63 CGVLEFIADEGMIYLPYW 80
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H GVL
Sbjct: 10 YRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSHCGVL 66
Query: 145 EL 146
E
Sbjct: 67 EF 68
>gi|118485222|gb|ABK94471.1| unknown [Populus trichocarpa]
Length = 314
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 158/231 (68%), Gaps = 8/231 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H
Sbjct: 11 FEQSYRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 67
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+ADEG +YLPYWMM N+LL EG++V + + SL TF K QP T DFLDI+NPK
Sbjct: 68 CGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPK 127
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++E KP +A++IIE D VDFAPP+ Y E
Sbjct: 128 AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFAPPLDYKE 187
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSG----FVAFHGTGNRLDGKRKKKDTVET 436
PEK K N I P + M EP+ F AF G+ RLDGK + T T
Sbjct: 188 PEKPKSIPRSNKIPP-EGMEEPAAKMPRFSAFTGSARRLDGKPATQPTAST 237
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H
Sbjct: 11 FEQSYRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 67
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+ADEG +YLPYW
Sbjct: 68 CGVLEFIADEGMIYLPYW 85
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS ++ +E+G KIIMPPSAL++L L+I YPMLF+L N GR +H GVL
Sbjct: 15 YRCYPVSFI---DKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSHCGVL 71
Query: 145 EL 146
E
Sbjct: 72 EF 73
>gi|169766788|ref|XP_001817865.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus oryzae
RIB40]
gi|238483559|ref|XP_002373018.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
flavus NRRL3357]
gi|83765720|dbj|BAE55863.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701068|gb|EED57406.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
flavus NRRL3357]
gi|391870949|gb|EIT80118.1| ubiquitin fusion-degradation protein [Aspergillus oryzae 3.042]
Length = 369
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 87
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 147
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 148 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPATNSNAISVLETDLEVDFAPP 207
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 208 VGYEEPQR 215
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 87
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 118
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 34 YRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTHAGVL 93
Query: 145 ELDGKRKK 152
E + K
Sbjct: 94 EFIAEEGK 101
>gi|317139938|ref|XP_003189216.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus oryzae
RIB40]
Length = 374
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 33 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 92
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 93 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 152
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 153 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPATNSNAISVLETDLEVDFAPP 212
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 213 VGYEEPQR 220
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 33 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 92
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 93 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 123
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 39 YRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTHAGVL 98
Query: 145 ELDGKRKK 152
E + K
Sbjct: 99 EFIAEEGK 106
>gi|145229383|ref|XP_001389000.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus niger CBS
513.88]
gi|134055104|emb|CAK43744.1| unnamed protein product [Aspergillus niger]
Length = 366
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSTDTNAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 207 VGYEEPQR 214
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 117
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 33 YRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTHAGVL 92
Query: 145 ELDGKRKK 152
E + K
Sbjct: 93 EFIAEEGK 100
>gi|326468676|gb|EGD92685.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton tonsurans
CBS 112818]
gi|326485141|gb|EGE09151.1| ubiquitin fusion degradation protein 1 [Trichophyton equinum CBS
127.97]
Length = 384
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 166/266 (62%), Gaps = 32/266 (12%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 18 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 77
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV I+S LP + K Q Q+ FLDI++
Sbjct: 78 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTSFLDISD 137
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 138 PKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLEVDFAPP 197
Query: 385 VGYTEPEKVKEKE-----------EDNMIDPVDLMPEPSGFVA----------------- 416
VGY EP+++ + M + + A
Sbjct: 198 VGYEEPKRLSGTSTPASGAAGSLPAGGTLHSHGTMAQSINYAAIAPGSNDAARAANAASS 257
Query: 417 -FHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 258 NFHGSGQRLNMKKGSKSSTPKSATPA 283
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 18 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 77
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN----EREDVERGGKIIM 109
TH+GVLEF+A+EGK+YLP+W + PG+ + D+ G KI +
Sbjct: 78 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKL 125
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++TH+GVL
Sbjct: 24 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQMTHAGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|358366891|dbj|GAA83511.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus kawachii IFO
4308]
Length = 366
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSTDTNAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 207 VGYEEPQR 214
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERL 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 117
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 33 YRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTHAGVL 92
Query: 145 ELDGKRKK 152
E + K
Sbjct: 93 EFIAEEGK 100
>gi|302505529|ref|XP_003014471.1| hypothetical protein ARB_07033 [Arthroderma benhamiae CBS 112371]
gi|291178292|gb|EFE34082.1| hypothetical protein ARB_07033 [Arthroderma benhamiae CBS 112371]
Length = 375
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 165/266 (62%), Gaps = 32/266 (12%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 9 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 68
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV I+S LP + K Q Q+ FLDI++
Sbjct: 69 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTSFLDISD 128
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 129 PKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLEVDFAPP 188
Query: 385 VGYTEPEKVKEKE-----------EDNMIDPVDLMPEPSGFVA----------------- 416
VGY EP ++ + M + + A
Sbjct: 189 VGYEEPTRLSGTSTPASGAAGSLPAGGTLHSHGTMAQSINYAAIAPGSNDAARAANAASS 248
Query: 417 -FHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 249 NFHGSGQRLNMKKGSKSSTPKSATPA 274
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 9 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 68
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN----EREDVERGGKIIM 109
TH+GVLEF+A+EGK+YLP+W + PG+ + D+ G KI +
Sbjct: 69 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKL 116
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++TH+GVL
Sbjct: 15 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQMTHAGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|115396772|ref|XP_001214025.1| hypothetical protein ATEG_04847 [Aspergillus terreus NIH2624]
gi|114193594|gb|EAU35294.1| hypothetical protein ATEG_04847 [Aspergillus terreus NIH2624]
Length = 365
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPEREGVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERM 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NAV+++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEVDFAPP 206
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 207 VGYEEPQR 214
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMMPGPEREGVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERM 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 117
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 33 YRCYPVAMMPGPEREGVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERMTHAGVL 92
Query: 145 ELDGKRKK 152
E + K
Sbjct: 93 EFIAEEGK 100
>gi|121703245|ref|XP_001269887.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
clavatus NRRL 1]
gi|119398030|gb|EAW08461.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
clavatus NRRL 1]
Length = 397
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELVNGSKERM 87
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ L L+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLQLEPGDLVQVKSTDLPSGRFIKLQAQSTSFLDISD 147
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP N A++++E D+ VDFAPP
Sbjct: 148 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNPTDAISVLETDLEVDFAPP 207
Query: 385 VGYTEPEK 392
VGY EP++
Sbjct: 208 VGYEEPKR 215
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELVNGSKERM 87
Query: 67 THSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
TH+GVLEF+A+EGK+YLP+W ++ + PG+
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLQLEPGD 118
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 34 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELVNGSKERMTHAGVL 93
Query: 145 EL 146
E
Sbjct: 94 EF 95
>gi|315048571|ref|XP_003173660.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
gi|311341627|gb|EFR00830.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
Length = 393
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 165/266 (62%), Gaps = 32/266 (12%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQRM 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV I+S LP + K Q Q+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWVMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP A++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDVFTFSYNDQIYEMAVLETKPETSQKAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEKVKEKE-----------EDNMIDPVDLMPEPSGFVA----------------- 416
VGY EP+++ + M + + A
Sbjct: 207 VGYEEPKRLSGTSTPSSGVAGSLPAGGTLHSHGTMAQSINYAAIAPGSSDAARAANAASS 266
Query: 417 -FHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 267 NFHGSGQRLNLKKGSKSSTPKSATPA 292
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQRM 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN----EREDVERGGKIIM 109
TH+GVLEF+A+EGK+YLP+W + PG+ + D+ G KI +
Sbjct: 87 THAGVLEFIAEEGKIYLPFWVMQTLLLEPGDLVQIKSTDLPPGSKIKL 134
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 63 MGRITHSGVLEFVADEGKVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLN 121
M I H ++ A + + Y+ C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+
Sbjct: 10 MDGILHPSMMRHGAHSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLH 69
Query: 122 ICYPMLFKLTNQKMGRITHSGVLEL 146
I YPMLF+L N R+TH+GVLE
Sbjct: 70 ITYPMLFELHNGAKQRMTHAGVLEF 94
>gi|119497287|ref|XP_001265403.1| ubiquitin fusion degradation protein Ufd1, putative [Neosartorya
fischeri NRRL 181]
gi|119413565|gb|EAW23506.1| ubiquitin fusion degradation protein Ufd1, putative [Neosartorya
fischeri NRRL 181]
Length = 384
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 142/185 (76%), Gaps = 3/185 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 17 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 76
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 77 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 136
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NAV+++E D+ VDFAPP
Sbjct: 137 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEVDFAPP 196
Query: 385 VGYTE 389
VGY E
Sbjct: 197 VGYEE 201
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 17 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 76
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 77 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 107
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 23 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTHAGVL 82
Query: 145 ELDGKRKK 152
E + K
Sbjct: 83 EFIAEEGK 90
>gi|255950618|ref|XP_002566076.1| Pc22g21810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593093|emb|CAP99469.1| Pc22g21810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 4/216 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERM 87
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ I+S LP F K Q Q+ FLDI++
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLLQIKSTDLPPGQFIKLQAQSTSFLDISD 147
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CL+ GD+ +YN ++YE+ VLETKP +AV+++E D+ VDFAPP
Sbjct: 148 PKAVLENAFRNFSCLSKGDVFTFSYNDQVYEMAVLETKPSGTKDAVSVLETDLEVDFAPP 207
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGT 420
VG+ EP++ + +P G + HGT
Sbjct: 208 VGFEEPQRTSGTSTPGSVVSGGKLPA-GGLLHPHGT 242
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERM 87
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 118
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 34 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERMTHAGVL 93
Query: 145 EL 146
E
Sbjct: 94 EF 95
>gi|70990288|ref|XP_749993.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus fumigatus
Af293]
gi|66847625|gb|EAL87955.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
fumigatus Af293]
gi|159130474|gb|EDP55587.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
fumigatus A1163]
Length = 384
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 142/185 (76%), Gaps = 3/185 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 17 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 76
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV ++S LP F K Q Q+ FLDI++
Sbjct: 77 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISD 136
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN ++YE+ VLETKP NAV+++E D+ VDFAPP
Sbjct: 137 PKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEVDFAPP 196
Query: 385 VGYTE 389
VGY E
Sbjct: 197 VGYEE 201
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 17 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 76
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 77 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 107
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 23 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTHAGVL 82
Query: 145 ELDGKRKK 152
E + K
Sbjct: 83 EFIAEEGK 90
>gi|327300849|ref|XP_003235117.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton rubrum CBS
118892]
gi|326462469|gb|EGD87922.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton rubrum CBS
118892]
Length = 393
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 165/266 (62%), Gaps = 32/266 (12%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+LV I+S LP + K Q Q+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEKVKEKEE---------------------DNMIDPVDLMPE--------PSGFV 415
VGY E ++ I+ + PE +
Sbjct: 207 VGYEESNRLSGTSTPASGAAGSLPAGGTLHSHGTMAQSINYAAIAPESNDAARAANAASS 266
Query: 416 AFHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 267 NFHGSGQRLNMKKGSKSSTPKSATPA 292
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN----EREDVERGGKIIM 109
TH+GVLEF+A+EGK+YLP+W + PG+ + D+ G KI +
Sbjct: 87 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKL 134
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++TH+GVL
Sbjct: 33 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQMTHAGVL 92
Query: 145 EL 146
E
Sbjct: 93 EF 94
>gi|297744721|emb|CBI37983.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 165/245 (67%), Gaps = 10/245 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 3 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 59
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG+ V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 60 CGVLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDISNPK 119
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ + E
Sbjct: 120 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDFKE 179
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKD--TVETGGTPTKR 443
PEK V + + + PEP F F G G RLDGK +K + V + G+ K+
Sbjct: 180 PEKPVAPVPLGKAAAEVQEAPVEPEPK-FNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQ 238
Query: 444 EYQRG 448
RG
Sbjct: 239 PVNRG 243
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 3 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 59
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 60 CGVLEFIAEEGMIYMPYW 77
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H GVL
Sbjct: 7 YRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVL 63
Query: 145 EL 146
E
Sbjct: 64 EF 65
>gi|295658985|ref|XP_002790052.1| ubiquitin fusion degradation protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282135|gb|EEH37701.1| ubiquitin fusion degradation protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 145/189 (76%), Gaps = 3/189 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R
Sbjct: 17 PRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDR 76
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+TH+GVLEF+A+EGK+YLP+W+M+ L L+ G+ V ++S LP + K Q Q+ FLDI+
Sbjct: 77 MTHAGVLEFIAEEGKIYLPFWLMQTLFLEPGDFVQVKSTDLPPGRYIKLQAQSTSFLDIS 136
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAP 383
+PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFA
Sbjct: 137 DPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLEVDFAT 196
Query: 384 PVGYTEPEK 392
PVGY EP++
Sbjct: 197 PVGYEEPKR 205
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R
Sbjct: 17 PRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDR 76
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSV 90
+TH+GVLEF+A+EGK+YLP+W
Sbjct: 77 MTHAGVLEFIAEEGKIYLPFWLMQT 101
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 50/62 (80%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVL
Sbjct: 24 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|225427780|ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
vinifera]
Length = 319
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 165/245 (67%), Gaps = 10/245 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 13 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG+ V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ + E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDFKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKD--TVETGGTPTKR 443
PEK V + + + PEP F F G G RLDGK +K + V + G+ K+
Sbjct: 190 PEKPVAPVPLGKAAAEVQEAPVEPEPK-FNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQ 248
Query: 444 EYQRG 448
RG
Sbjct: 249 PVNRG 253
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 13 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H GVL
Sbjct: 17 YRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|225554579|gb|EEH02875.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus
G186AR]
Length = 401
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 146/193 (75%), Gaps = 3/193 (1%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
IPR F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+
Sbjct: 26 IPRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKD 85
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI
Sbjct: 86 RTTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDI 145
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFA 382
++PKAVLEN RNF+CL+ D+ +YN YE+ VLETKP NA++++E D+ VDFA
Sbjct: 146 SDPKAVLENAFRNFSCLSKDDIFTFSYNDHTYEMAVLETKPQHSKNAISVLETDLEVDFA 205
Query: 383 PPVGYTEPEKVKE 395
PVGY EP+++ E
Sbjct: 206 TPVGYEEPKRINE 218
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
IPR F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+
Sbjct: 26 IPRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKD 85
Query: 65 RITHSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
R TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 86 RTTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGD 118
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVL
Sbjct: 34 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVL 93
Query: 145 ELDGKRKK 152
E + K
Sbjct: 94 EFIAEEGK 101
>gi|396495931|ref|XP_003844665.1| similar to ubiquitin fusion degradation protein 1 [Leptosphaeria
maculans JN3]
gi|312221245|emb|CBY01186.1| similar to ubiquitin fusion degradation protein 1 [Leptosphaeria
maculans JN3]
Length = 344
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 146/191 (76%), Gaps = 4/191 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 265
PR F+ ++C+ ++M PG ERE+ GGK+ +PPSAL++LTR++I YPMLF+L N K G
Sbjct: 13 PRRFDEYFRCYPIAMLPGPEREEANHGGKVFLPPSALDKLTRMHITYPMLFELINGKQDG 72
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R TH+GVLEF+A+EGK+YLPYW+M+ LLL+ G+L+ ++S LP+ TF K QPQ FLDI
Sbjct: 73 RKTHAGVLEFIAEEGKIYLPYWLMQTLLLEPGDLLQVKSTDLPLGTFIKLQPQDPSFLDI 132
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFA 382
++PKAVLEN RNF+CLT+GD+ +YN +Y + VLET+P + A+ +E D++VDFA
Sbjct: 133 SDPKAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETRPDHPSKAICTLETDLSVDFA 192
Query: 383 PPVGYTEPEKV 393
PPVGY EP+K
Sbjct: 193 PPVGYQEPQKT 203
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 2/93 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 64
PR F+ ++C+ ++M PG ERE+ GGK+ +PPSAL++LTR++I YPMLF+L N K G
Sbjct: 13 PRRFDEYFRCYPIAMLPGPEREEANHGGKVFLPPSALDKLTRMHITYPMLFELINGKQDG 72
Query: 65 RITHSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
R TH+GVLEF+A+EGK+YLPYW + PG+
Sbjct: 73 RKTHAGVLEFIAEEGKIYLPYWLMQTLLLEPGD 105
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
+ C+ ++M PG ERE+ GGK+ +PPSAL++LTR++I YPMLF+L N K GR TH+GV
Sbjct: 20 FRCYPIAMLPGPEREEANHGGKVFLPPSALDKLTRMHITYPMLFELINGKQDGRKTHAGV 79
Query: 144 LELDGKRKK 152
LE + K
Sbjct: 80 LEFIAEEGK 88
>gi|170596976|ref|XP_001902965.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Brugia malayi]
gi|158589018|gb|EDP28183.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Brugia malayi]
Length = 320
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 169/276 (61%), Gaps = 10/276 (3%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYP 254
FG MF RPF+ +CFS + + G + + ++ GGKI++PPSAL+ L RLNI YP
Sbjct: 5 FGAIMFGASVRPFDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYP 64
Query: 255 MLFKLTNQKMGR-ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
M+FK+ N + TH GVLEF+A+EG+ YLP WMMR L L+EGE V I +LP AT++
Sbjct: 65 MMFKVQNLTDAKCFTHCGVLEFLAEEGRCYLPSWMMRQLHLNEGECVRITYATLPKATYT 124
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
K +PQ+ DFL I+NP+AVLE LR FACLT GD+IA+ YN +I E V+E KP AV+II
Sbjct: 125 KLKPQSTDFLAISNPRAVLEVELRKFACLTKGDIIAVEYNDQILEFLVMEVKPERAVSII 184
Query: 374 ECDMNVDFAPPVGYTEPE----KVKEKEEDNMIDPV--DLMPEPSGFVAFHGTGNRLDGK 427
ECDMNV+F P GY EP P ++ SGF AF G G+RLDGK
Sbjct: 185 ECDMNVEFDAPEGYVEPNTNAASSSNAAPSMSSTPAADEIGKGGSGFKAFTGAGHRLDGK 244
Query: 428 RKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
K T T +R + + + +Y P L F+R
Sbjct: 245 SKSSTTSLTEMEAAERSLPQLVVNTNYTPGKLEFVR 280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFK 57
MF RPF+ +CFS + + G + + ++ GGKI++PPSAL+ L RLNI YPM+FK
Sbjct: 9 MFGASVRPFDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPMMFK 68
Query: 58 LTNQKMGR-ITHSGVLEFVADEGKVYLPYW 86
+ N + TH GVLEF+A+EG+ YLP W
Sbjct: 69 VQNLTDAKCFTHCGVLEFLAEEGRCYLPSW 98
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 70 GVLEFVADEGKVYLPYWCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPM 126
G + F A L CFS + + G + + ++ GGKI++PPSAL+ L RLNI YPM
Sbjct: 6 GAIMFGASVRPFDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPM 65
Query: 127 LFKLTNQKMGR-ITHSGVLEL 146
+FK+ N + TH GVLE
Sbjct: 66 MFKVQNLTDAKCFTHCGVLEF 86
>gi|242060760|ref|XP_002451669.1| hypothetical protein SORBIDRAFT_04g005550 [Sorghum bicolor]
gi|241931500|gb|EES04645.1| hypothetical protein SORBIDRAFT_04g005550 [Sorghum bicolor]
Length = 313
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 162/239 (67%), Gaps = 11/239 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVK----EKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE VK E P + P+ F+ F G+G RLDGK K V+ +P KR+
Sbjct: 190 PEPVKPAVPASTEPTTEAPAEEEPK---FIPFTGSGRRLDGKPSKDKDVQ-ASSPAKRQ 244
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|212537845|ref|XP_002149078.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
marneffei ATCC 18224]
gi|210068820|gb|EEA22911.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
marneffei ATCC 18224]
Length = 380
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 142/188 (75%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ ++S LP F K QPQ+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLIQVKSTDLPPGRFIKLQPQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD YN ++YE+ VL+ KP A++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDAFTFAYNDQVYEIAVLDVKPDGDKKAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEK 392
VGY EP +
Sbjct: 207 VGYEEPTR 214
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 117
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 33 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTHAGVL 92
Query: 145 EL 146
E
Sbjct: 93 EF 94
>gi|425771292|gb|EKV09739.1| Ubiquitin fusion degradation protein Ufd1, putative [Penicillium
digitatum Pd1]
gi|425776823|gb|EKV15024.1| Ubiquitin fusion degradation protein Ufd1, putative [Penicillium
digitatum PHI26]
Length = 395
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 144/189 (76%), Gaps = 3/189 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERESVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 87
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ I+S LP F K Q Q+ FLDI++
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLLQIKSTDLPPGQFIKIQAQSTSFLDISD 147
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CL+ GD+ +YN ++YE+ VLETKP NA++++E D+ VDFA P
Sbjct: 148 PKAVLENAFRNFSCLSKGDVFTFSYNDQVYEMAVLETKPSGTKNAISVLETDLEVDFAAP 207
Query: 385 VGYTEPEKV 393
VG+ EP++
Sbjct: 208 VGFEEPQRA 216
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 28 RRFDEYYRCYPVAMLPGPERESVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 87
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 88 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 118
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE V GGK+IMPPSAL++LTRL+I YPMLF+L N R+TH+GVL
Sbjct: 34 YRCYPVAMLPGPERESVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTHAGVL 93
Query: 145 EL 146
E
Sbjct: 94 EF 95
>gi|327354928|gb|EGE83785.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 408
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 146/189 (77%), Gaps = 3/189 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R
Sbjct: 30 RRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRT 89
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI++
Sbjct: 90 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISD 149
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CL+ GD+ +YN +IYE+ VLETKP +A++++E D+ VDFA P
Sbjct: 150 PKAVLENAFRNFSCLSKGDIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLEVDFATP 209
Query: 385 VGYTEPEKV 393
+GY EP++V
Sbjct: 210 IGYEEPKRV 218
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R
Sbjct: 30 RRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRT 89
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 90 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGD 120
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVL
Sbjct: 36 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|242808131|ref|XP_002485099.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218715724|gb|EED15146.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 380
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 142/189 (75%), Gaps = 3/189 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG RE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPVRENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ ++S LP F K QPQ+ FLDI++
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLIQVKSTDLPPGRFIKLQPQSTSFLDISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ YN +IYE+ VL+ KP A++++E D+ VDFAPP
Sbjct: 147 PKAVLENAFRNFSCLTKGDVFTFAYNDQIYEIAVLDVKPDGDKKAISVLETDLEVDFAPP 206
Query: 385 VGYTEPEKV 393
VGY EP +
Sbjct: 207 VGYEEPTRT 215
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG RE+V GGK+IMPPSAL++LTRL+I YPMLF+L N R+
Sbjct: 27 RRFDEYYRCYPVAMLPGPVRENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERM 86
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 87 THAGVLEFIAEEGKIYLPFWLMQTLLLEPGD 117
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 128
SG + + A + Y C+ V+M PG RE+V GGK+IMPPSAL++LTRL+I YPMLF
Sbjct: 17 SGAIRYGAPTRRFDEYYRCYPVAMLPGPVRENVNHGGKVIMPPSALDKLTRLHITYPMLF 76
Query: 129 KLTNQKMGRITHSGVLEL 146
+L N R+TH+GVLE
Sbjct: 77 ELHNGAKERMTHAGVLEF 94
>gi|238013196|gb|ACR37633.1| unknown [Zea mays]
gi|413926362|gb|AFW66294.1| ubiquitin fusion degradation protein 1 [Zea mays]
Length = 310
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 7/237 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKEKEEDNMIDPVDL-MPEPSGFVAFHGTGNRLDGK-RKKKDTVETGGTPTKRE 444
PE VK + D+ E F+ F G+G RLDGK K KD + + +P KR+
Sbjct: 190 PEPVKPAVPASTEPGTDVPAEEEPKFIPFTGSGRRLDGKPSKDKDVLAS--SPAKRQ 244
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|226505988|ref|NP_001149183.1| LOC100282805 [Zea mays]
gi|195625298|gb|ACG34479.1| ubiquitin fusion degradation protein 1 [Zea mays]
Length = 310
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 7/237 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKEKEEDNMIDPVDL-MPEPSGFVAFHGTGNRLDGK-RKKKDTVETGGTPTKRE 444
PE VK + D+ E F+ F G+G RLDGK K KD + + +P KR+
Sbjct: 190 PEPVKPAVPASTEPGTDVPAEEEPKFIPFTGSGRRLDGKPSKDKDVLAS--SPAKRQ 244
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|167521720|ref|XP_001745198.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776156|gb|EDQ89776.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 142/188 (75%), Gaps = 3/188 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
+ R ++C S+ M G RED + GGKI +PP ALE L N+ YPM+FKL N +G+ TH
Sbjct: 14 WQRKFRCHSIMMLQGAAREDADTGGKIFLPPDALEDLASRNVQYPMMFKLRNDSIGKETH 73
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF A G VY+P WMMRNLLL E E++ ++++S+ T++KFQPQ+ DFLDI+NPK
Sbjct: 74 AGVLEFTATPGHVYMPGWMMRNLLLQEDEIITVQNLSMVTCTYAKFQPQSPDFLDISNPK 133
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLEN LR F+CLT D+IAINYN+K+YE+ VLE KP N AV+I+ECDM ++FA P+G
Sbjct: 134 AVLENTLRKFSCLTVNDIIAINYNNKVYEIEVLEVKPENSDQAVSIVECDMQLEFAAPIG 193
Query: 387 YTEPEKVK 394
Y EPE+V+
Sbjct: 194 YKEPERVR 201
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
+ R ++C S+ M G RED + GGKI +PP ALE L N+ YPM+FKL N +G+ TH
Sbjct: 14 WQRKFRCHSIMMLQGAAREDADTGGKIFLPPDALEDLASRNVQYPMMFKLRNDSIGKETH 73
Query: 69 SGVLEFVADEGKVYLPYW 86
+GVLEF A G VY+P W
Sbjct: 74 AGVLEFTATPGHVYMPGW 91
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
C S+ M G RED + GGKI +PP ALE L N+ YPM+FKL N +G+ TH+GVLE
Sbjct: 20 CHSIMMLQGAAREDADTGGKIFLPPDALEDLASRNVQYPMMFKLRNDSIGKETHAGVLEF 79
Query: 147 DG 148
Sbjct: 80 TA 81
>gi|325094858|gb|EGC48168.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H88]
Length = 444
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 145/191 (75%), Gaps = 3/191 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R
Sbjct: 71 RRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRT 130
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI++
Sbjct: 131 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISD 190
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CL+ D+ +YN IYE+ VLETKP NA++++E D+ VDFA P
Sbjct: 191 PKAVLENAFRNFSCLSKDDIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFATP 250
Query: 385 VGYTEPEKVKE 395
VGY EP+++ E
Sbjct: 251 VGYEEPKRINE 261
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R
Sbjct: 71 RRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRT 130
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 131 THAGVLEFIAEEGKIYLPFWIMQTLLLEPGD 161
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVL
Sbjct: 77 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVL 136
Query: 145 ELDGKRKK 152
E + K
Sbjct: 137 EFIAEEGK 144
>gi|255586174|ref|XP_002533746.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223526334|gb|EEF28633.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 315
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 150/222 (67%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F RSY+C+ S ++ +E+G KIIMPPSAL+QL L+I YPMLF+L N R+TH
Sbjct: 11 FERSYRCYPGSFI---DKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERVTH 67
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVADEG ++LPYWMM N+LL EG+LV +++ SL T+ K QP T DFLDI+NPK
Sbjct: 68 CGVLEFVADEGLIFLPYWMMENMLLQEGDLVQLKNASLMKGTYVKLQPHTTDFLDISNPK 127
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP AV+IIE D VDFAPP+ Y E
Sbjct: 128 AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPPLDYKE 187
Query: 390 PEKVKEKEEDNMIDPVDLMPEPS----GFVAFHGTGNRLDGK 427
PEK N P + EP+ F F G RLDGK
Sbjct: 188 PEKPSPSPRSNQTRP-KVEEEPAKKIPKFSPFSGAARRLDGK 228
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F RSY+C+ S ++ +E+G KIIMPPSAL+QL L+I YPMLF+L N R+TH
Sbjct: 11 FERSYRCYPGSFI---DKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERVTH 67
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVADEG ++LPYW
Sbjct: 68 CGVLEFVADEGLIFLPYW 85
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E+G KIIMPPSAL+QL L+I YPMLF+L N R+TH GVL
Sbjct: 15 YRCYPGSFI---DKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERVTHCGVL 71
Query: 145 EL 146
E
Sbjct: 72 EF 73
>gi|18399646|ref|NP_565504.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|79322611|ref|NP_001031384.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|20197912|gb|AAD23675.2| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
gi|110741145|dbj|BAE98665.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
gi|111609940|gb|ABH11520.1| UFD1a [synthetic construct]
gi|193885163|gb|ACF28395.1| At2g21270 [Arabidopsis thaliana]
gi|330252058|gb|AEC07152.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|330252059|gb|AEC07153.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
Length = 319
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 156/222 (70%), Gaps = 9/222 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLTSGD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ K + VD PEP F F G+G RLDG+
Sbjct: 190 PERPTAPSAAKGPAKAEEVVD-EPEPK-FNPFTGSGRRLDGR 229
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH GVL
Sbjct: 17 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|297821317|ref|XP_002878541.1| hypothetical protein ARALYDRAFT_480987 [Arabidopsis lyrata subsp.
lyrata]
gi|297324380|gb|EFH54800.1| hypothetical protein ARALYDRAFT_480987 [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 155/221 (70%), Gaps = 7/221 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQIESGDKIIMPPSALDRLASLHIDYPMLFEVRNAGIERVTH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK---VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ + + V PEP F F G+G RLDG+
Sbjct: 190 PERPTAPAAAKGPAKAEEVVTEPEPK-FNPFTGSGRRLDGR 229
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQIESGDKIIMPPSALDRLASLHIDYPMLFEVRNAGIERVTH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N + R+TH GVL
Sbjct: 17 YRCYPASFI---DKPQIESGDKIIMPPSALDRLASLHIDYPMLFEVRNAGIERVTHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|21592947|gb|AAM64897.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
Length = 319
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 155/221 (70%), Gaps = 7/221 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLTSGD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK---VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ + + V PEP F F G+G RLDG+
Sbjct: 190 PERPTAPAAAKGPAKAEEVVDEPEPK-FNPFTGSGRRLDGR 229
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH GVL
Sbjct: 17 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|118488238|gb|ABK95938.1| unknown [Populus trichocarpa]
Length = 324
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 14 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSH 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM NLLL EG+ V +++V+LP + K QP T DFLDI+NPK
Sbjct: 71 CGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDISNPK 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 131 AILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKE 190
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK V + + + V EP F F G G RLDGK
Sbjct: 191 PEKPVASVPPSKATSQAEEVPAETEPK-FNPFTGAGRRLDGK 231
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 14 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSH 70
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 71 CGVLEFIAEEGMIYMPYW 88
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 18 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSHCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|145329208|ref|NP_001077933.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|222424176|dbj|BAH20047.1| AT2G21270 [Arabidopsis thaliana]
gi|330252060|gb|AEC07154.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
Length = 340
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 156/222 (70%), Gaps = 9/222 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 34 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 90
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI+NPK
Sbjct: 91 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPK 150
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLTSGD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 151 AILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKE 210
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ K + VD PEP F F G+G RLDG+
Sbjct: 211 PERPTAPSAAKGPAKAEEVVD-EPEPK-FNPFTGSGRRLDGR 250
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH
Sbjct: 34 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTH 90
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 91 CGVLEFIAEEGMIYMPYW 108
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N + R+TH GVL
Sbjct: 38 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVL 94
Query: 145 EL 146
E
Sbjct: 95 EF 96
>gi|224103317|ref|XP_002313007.1| predicted protein [Populus trichocarpa]
gi|222849415|gb|EEE86962.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM NLLL EG+ V +++V+LP + K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK V + + + V EP F F G G RLDGK
Sbjct: 190 PEKPVASVPPSKATSQAEEVPAETEPK-FNPFTGAGRRLDGK 230
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|357521303|ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation protein [Medicago truncatula]
Length = 320
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 155/224 (69%), Gaps = 12/224 (5%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++E+KP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPANAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ + E + P + P+ F F G+G RLDGK
Sbjct: 190 PERPVAPRSAGKAPEADKEAPAETEPK---FNPFTGSGRRLDGK 230
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMP 110
GVLEF+A+EG +Y+PYW + + DV R + +P
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLL---QEGDVVRVKNVTLP 108
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|303319189|ref|XP_003069594.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109280|gb|EER27449.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 351
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE GGK+ MP SAL++LTRL+I YPMLF++ N R+
Sbjct: 18 RRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGAKQRM 77
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+WMM+ LLL+ G+L+ I+S LP+ K Q Q+ FLDI++
Sbjct: 78 THAGVLEFIAEEGKIYLPFWMMQTLLLEPGDLLQIKSTDLPLGRLIKLQAQSTSFLDISD 137
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN + YE+ VLETK P NA++++E D+ VDFAPP
Sbjct: 138 PKAVLENAFRNFSCLTKGDVFTFSYNDQTYEMAVLETKPENPENAISVLETDLEVDFAPP 197
Query: 385 VGYTEPEK 392
+GY EP++
Sbjct: 198 LGYEEPKR 205
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE GGK+ MP SAL++LTRL+I YPMLF++ N R+
Sbjct: 18 RRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGAKQRM 77
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 78 THAGVLEFIAEEGKIYLPFWMMQTLLLEPGD 108
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 63 MGRITHSGVLEFVADEGKVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLN 121
M + H G++ + + Y+ C+ V+M PG ERE GGK+ MP SAL++LTRL+
Sbjct: 1 MDGVFHPGLMRRAGHAARRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLH 60
Query: 122 ICYPMLFKLTNQKMGRITHSGVLELDGKRKK 152
I YPMLF++ N R+TH+GVLE + K
Sbjct: 61 ITYPMLFEVHNGAKQRMTHAGVLEFIAEEGK 91
>gi|307105024|gb|EFN53275.1| hypothetical protein CHLNCDRAFT_136896 [Chlorella variabilis]
Length = 347
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 156/232 (67%), Gaps = 18/232 (7%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F SY+C+ VS ++ + ERG KI +PPSAL++L +L+I YPMLF++ N++ GR TH
Sbjct: 13 FEASYRCYPVSFL---DKPEAERGDKIFLPPSALDRLAQLHIDYPMLFQVENRRDGRNTH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+ADEG VY+PYWMM+NLLL EG++V + S +LP TF K QP + DFLDITNP+
Sbjct: 70 CGVLEFIADEGMVYMPYWMMQNLLLQEGDVVQLRSATLPKGTFVKLQPHSADFLDITNPR 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LRNF+CLT GD I INYN++ Y + ++E KP +A+++IE D NVDFAPP+ Y E
Sbjct: 130 AVLETTLRNFSCLTVGDTIPINYNNRRYFIDIIEAKPSDAISVIETDCNVDFAPPLDYVE 189
Query: 390 PEKVKEKEEDNM--------------IDPVDLMPEPSGFVAFHGTGNRLDGK 427
P + + M D +P F+AF G+G RLDGK
Sbjct: 190 PARQPPPQPVPMAAEGPAAAAGAAPAADEAAEPEQPK-FLAFAGSGRRLDGK 240
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F SY+C+ VS ++ + ERG KI +PPSAL++L +L+I YPMLF++ N++ GR TH
Sbjct: 13 FEASYRCYPVSFL---DKPEAERGDKIFLPPSALDRLAQLHIDYPMLFQVENRRDGRNTH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+ADEG VY+PYW
Sbjct: 70 CGVLEFIADEGMVYMPYW 87
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS ++ + ERG KI +PPSAL++L +L+I YPMLF++ N++ GR TH GVL
Sbjct: 17 YRCYPVSFL---DKPEAERGDKIFLPPSALDRLAQLHIDYPMLFQVENRRDGRNTHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|119182456|ref|XP_001242357.1| hypothetical protein CIMG_06253 [Coccidioides immitis RS]
gi|320040993|gb|EFW22926.1| ubiquitin fusion degradation protein Ufd1 [Coccidioides posadasii
str. Silveira]
gi|392865250|gb|EAS31032.2| ubiquitin fusion degradation protein Ufd1 [Coccidioides immitis RS]
Length = 363
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE GGK+ MP SAL++LTRL+I YPMLF++ N R+
Sbjct: 30 RRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGAKQRM 89
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+WMM+ LLL+ G+L+ I+S LP+ K Q Q+ FLDI++
Sbjct: 90 THAGVLEFIAEEGKIYLPFWMMQTLLLEPGDLLQIKSTDLPLGRLIKLQAQSTSFLDISD 149
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN + YE+ VLETK P NA++++E D+ VDFAPP
Sbjct: 150 PKAVLENAFRNFSCLTKGDVFTFSYNDQTYEMAVLETKPENPENAISVLETDLEVDFAPP 209
Query: 385 VGYTEPEK 392
+GY EP++
Sbjct: 210 LGYEEPKR 217
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE GGK+ MP SAL++LTRL+I YPMLF++ N R+
Sbjct: 30 RRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGAKQRM 89
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN 96
TH+GVLEF+A+EGK+YLP+W + PG+
Sbjct: 90 THAGVLEFIAEEGKIYLPFWMMQTLLLEPGD 120
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLT 118
N M + H G++ + + Y+ C+ V+M PG ERE GGK+ MP SAL++LT
Sbjct: 10 NDPMDGVFHPGLMRRAGHAARRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLT 69
Query: 119 RLNICYPMLFKLTNQKMGRITHSGVLELDGKRKK 152
RL+I YPMLF++ N R+TH+GVLE + K
Sbjct: 70 RLHITYPMLFEVHNGAKQRMTHAGVLEFIAEEGK 103
>gi|168052703|ref|XP_001778779.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669785|gb|EDQ56365.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 159/241 (65%), Gaps = 14/241 (5%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
FG P PF ++Y+C+S S ++ +E G K++MPPSAL++L L I YPMLF
Sbjct: 3 FGNYGIPYSSAPFEQNYRCYSASFI---DKPHLENGDKVVMPPSALDRLASLRIDYPMLF 59
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
++ N R +H GVLEFVA+EG +Y+PYWMM+N+LL EG++V ++S +LP TF K QP
Sbjct: 60 EVHNPSTLRTSHCGVLEFVAEEGMIYMPYWMMQNMLLQEGDIVRVKSATLPKGTFVKLQP 119
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDM 377
T DFLDI+NPKAVLE LRNF+CLT GD I + YN+K Y + ++E+KP NA++IIE D
Sbjct: 120 HTKDFLDISNPKAVLETTLRNFSCLTIGDNIMVAYNNKKYYIDIIESKPANAISIIETDC 179
Query: 378 NVDFAPPVGYTEPEKV--------KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
VDFAPP+ Y EPE+V + +D P P+ F AF GTG RLDGK
Sbjct: 180 EVDFAPPLDYKEPERVTPPPVSVPAQSSQDATPPPEPEEPK---FSAFTGTGRRLDGKPG 236
Query: 430 K 430
K
Sbjct: 237 K 237
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
PF ++Y+C+S S ++ +E G K++MPPSAL++L L I YPMLF++ N R +
Sbjct: 14 PFEQNYRCYSASFI---DKPHLENGDKVVMPPSALDRLASLRIDYPMLFEVHNPSTLRTS 70
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVA+EG +Y+PYW
Sbjct: 71 HCGVLEFVAEEGMIYMPYW 89
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S S ++ +E G K++MPPSAL++L L I YPMLF++ N R +H GVL
Sbjct: 19 YRCYSASFI---DKPHLENGDKVVMPPSALDRLASLRIDYPMLFEVHNPSTLRTSHCGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|330933598|ref|XP_003304234.1| hypothetical protein PTT_16730 [Pyrenophora teres f. teres 0-1]
gi|311319317|gb|EFQ87691.1| hypothetical protein PTT_16730 [Pyrenophora teres f. teres 0-1]
Length = 357
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 142/191 (74%), Gaps = 4/191 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 265
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 85
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
+ TH+GVLEF+A+EGK+YLP+W+M L L+ G+L+ ++S +P+ TF K QPQ FLDI
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPHWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLDI 145
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFA 382
++PKAVLEN RNF+CLT+GD+ +YN +Y + VLETK P AV IE D++VDFA
Sbjct: 146 SDPKAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFA 205
Query: 383 PPVGYTEPEKV 393
PPVGY EP++
Sbjct: 206 PPVGYQEPQRT 216
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 64
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 85
Query: 65 RITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+ TH+GVLEF+A+EGK+YLP+W ++ + PG+
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPHWLMETLKLEPGD 118
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
+ C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G+ TH+GV
Sbjct: 33 FRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKKTHAGV 92
Query: 144 LELDGKRKK 152
LE + K
Sbjct: 93 LEFIAEEGK 101
>gi|189189186|ref|XP_001930932.1| ubiquitin fusion degradation protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972538|gb|EDU40037.1| ubiquitin fusion degradation protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 357
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 142/191 (74%), Gaps = 4/191 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 265
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 85
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
+ TH+GVLEF+A+EGK+YLP+W+M L L+ G+L+ ++S +P+ TF K QPQ FLDI
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPHWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLDI 145
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFA 382
++PKAVLEN RNF+CLT+GD+ +YN +Y + VLETK P AV IE D++VDFA
Sbjct: 146 SDPKAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFA 205
Query: 383 PPVGYTEPEKV 393
PPVGY EP++
Sbjct: 206 PPVGYQEPQRT 216
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 64
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 85
Query: 65 RITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+ TH+GVLEF+A+EGK+YLP+W ++ + PG+
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPHWLMETLKLEPGD 118
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
+ C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G+ TH+GV
Sbjct: 33 FRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKKTHAGV 92
Query: 144 LELDGKRKK 152
LE + K
Sbjct: 93 LEFIAEEGK 101
>gi|357168246|ref|XP_003581555.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Brachypodium distachyon]
Length = 434
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 158/241 (65%), Gaps = 21/241 (8%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 127 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGATERISH 183
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG++V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 184 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDMVRVKNATLPKGTYVKLQPHTTDFLDISNPK 243
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++E KP +AV+IIE D VDFAPP+ Y E
Sbjct: 244 AILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVEAKPASAVSIIETDCEVDFAPPLDYKE 303
Query: 390 PEK-----------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGG 438
PEK + E ++ N+ D EP F F G G RLDGK K+ E
Sbjct: 304 PEKPQQPIVPARKALAEAQDANVED------EPK-FKPFTGYGKRLDGKGSKQQAPEVSS 356
Query: 439 T 439
Sbjct: 357 A 357
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 127 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGATERISH 183
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 184 CGVLEFVAEEGMIIMPYW 201
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 131 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGATERISHCGVL 187
Query: 145 EL 146
E
Sbjct: 188 EF 189
>gi|222354863|gb|ACM48192.1| ubiquitin fusion degradation 1 protein [Triticum aestivum]
Length = 317
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 7/237 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERTSH 71
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 72 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 131
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP +A++IIE D VDFAPP+ Y E
Sbjct: 132 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPASAISIIETDCEVDFAPPLDYKE 191
Query: 390 PEKVKEKEEDNMIDPV--DLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE+ K + DP + E F F G G RLDGK KD + +P KR+
Sbjct: 192 PERPKPTAPPSA-DPAAEAQVEEEPKFSPFTGPGRRLDGK-PAKDLDASSSSPAKRQ 246
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERTSH 71
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 72 CGVLEFIAEEGMIYMPYW 89
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 19 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERTSHCGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|226528266|ref|NP_001148560.1| LOC100282176 [Zea mays]
gi|195620438|gb|ACG32049.1| ubiquitin fusion degradation protein 1 [Zea mays]
gi|414585800|tpg|DAA36371.1| TPA: ubiquitin fusion degradation protein 1 isoform 1 [Zea mays]
gi|414585801|tpg|DAA36372.1| TPA: ubiquitin fusion degradation protein 1 isoform 2 [Zea mays]
Length = 321
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 157/235 (66%), Gaps = 9/235 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG+ V++++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVHVKNATLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP +AV+IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKEKEEDNMIDPVD-----LMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGT 439
PEK ++ P + + EP F F G G RLDGK K E T
Sbjct: 190 PEKPRQPTVPASKAPAEDGNTAVEDEPK-FKPFTGFGKRLDGKASKLQASEVPST 243
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 70 CGVLEFVAEEGMIIMPYW 87
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 17 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|324519112|gb|ADY47288.1| Ubiquitin fusion degradation protein 1 [Ascaris suum]
Length = 322
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 169/279 (60%), Gaps = 14/279 (5%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYP 254
G +F RPF+ +CFS + + + ++ GGKI++PPSAL+ L RLNI YP
Sbjct: 5 LGGMLFGGPVRPFDMQLRCFSAPFYGRADSDKINELNHGGKILLPPSALDLLVRLNIEYP 64
Query: 255 MLFKLTN-QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
M+FK+++ + R TH GVLEF+A+EG+ YLP WMMR L L EG+ + + SLP AT++
Sbjct: 65 MMFKVSSINEPQRFTHCGVLEFLAEEGRCYLPSWMMRQLHLSEGDCIRVTYSSLPSATYA 124
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
KF+PQ+ DFL I+NP+A+LE LR FACLT GD+IA+ YN ++ E V+E KPGNAV II
Sbjct: 125 KFKPQSTDFLAISNPRAMLEVELRKFACLTKGDVIAVQYNEQLLEFLVMEVKPGNAVAII 184
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDN---------MIDPVDLMPEPSGFVAFHGTGNRL 424
ECDMNV+F P GY EP + + P F AF G+G+RL
Sbjct: 185 ECDMNVEFDAPEGYVEPSVSGASSTSTKPSAPPRVPSVGKGLVAPSEKKFTAFTGSGHRL 244
Query: 425 DGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
DGK K + ++ + Q + +YEP +L F+R
Sbjct: 245 DGKTKSQTSLAELADSENKLPQL-VVETNYEPGSLTFVR 282
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 7 RPFNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QK 62
RPF+ +CFS + + + ++ GGKI++PPSAL+ L RLNI YPM+FK+++ +
Sbjct: 15 RPFDMQLRCFSAPFYGRADSDKINELNHGGKILLPPSALDLLVRLNIEYPMMFKVSSINE 74
Query: 63 MGRITHSGVLEFVADEGKVYLPYW 86
R TH GVLEF+A+EG+ YLP W
Sbjct: 75 PQRFTHCGVLEFLAEEGRCYLPSW 98
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 87 CFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSG 142
CFS + + + ++ GGKI++PPSAL+ L RLNI YPM+FK+++ + R TH G
Sbjct: 23 CFSAPFYGRADSDKINELNHGGKILLPPSALDLLVRLNIEYPMMFKVSSINEPQRFTHCG 82
Query: 143 VLEL 146
VLE
Sbjct: 83 VLEF 86
>gi|451854566|gb|EMD67859.1| hypothetical protein COCSADRAFT_293916 [Cochliobolus sativus
ND90Pr]
gi|451995858|gb|EMD88325.1| hypothetical protein COCHEDRAFT_1181249 [Cochliobolus
heterostrophus C5]
gi|451999648|gb|EMD92110.1| hypothetical protein COCHEDRAFT_1173688 [Cochliobolus
heterostrophus C5]
Length = 357
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 141/191 (73%), Gaps = 4/191 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 265
PR F+ ++C+ ++M PG ER + GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIAMLPGPERPEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKQDG 85
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
+ TH+GVLEF+A+EGK+YLPYW+M L L+ G+L+ ++S +P+ TF K QPQ FL+I
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPYWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLEI 145
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFA 382
++PKAVLEN RNF+CLT+GD+ YN +Y + VLETK P AV IE D++VDFA
Sbjct: 146 SDPKAVLENAFRNFSCLTTGDIFTFAYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFA 205
Query: 383 PPVGYTEPEKV 393
PPVGY EP++
Sbjct: 206 PPVGYQEPQRT 216
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 64
PR F+ ++C+ ++M PG ER + GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 26 PRRFDEYFRCYPIAMLPGPERPEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKQDG 85
Query: 65 RITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+ TH+GVLEF+A+EGK+YLPYW ++ + PG+
Sbjct: 86 KKTHAGVLEFIAEEGKIYLPYWLMETLKLEPGD 118
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
+ C+ ++M PG ER + GGK+ +PPSAL++LTRL+I YPMLF+L N K G+ TH+GV
Sbjct: 33 FRCYPIAMLPGPERPEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKQDGKKTHAGV 92
Query: 144 LELDGKRKK 152
LE + K
Sbjct: 93 LEFIAEEGK 101
>gi|407916528|gb|EKG09896.1| Ubiquitin fusion degradation protein UFD1 [Macrophomina phaseolina
MS6]
Length = 369
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+Q M PR F+ ++C+ V+M PG ERE+ GGK +PPSAL++LTRL+I YPM
Sbjct: 16 YQAAMGMRGGQPRRFDEYFRCYPVAMMPGPEREEANHGGKAFLPPSALDKLTRLHITYPM 75
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LF+LTN G+ TH+GVLEF A+EGK+YLPYW+M+ L L+ G+LV ++S LP+ F K
Sbjct: 76 LFELTNGTDGKRTHAGVLEFTAEEGKIYLPYWLMQTLSLEPGDLVQVKSTDLPLGNFIKL 135
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTI 372
QPQ+ FLDI++PKAVLE RNF+CLT GD+ YN ++Y + VLE KP +A+
Sbjct: 136 QPQSPAFLDISDPKAVLEQAFRNFSCLTVGDIFTFAYNDQVYSIKVLEVKPDKESHAICT 195
Query: 373 IECDMNVDFAPPVGYTEPEKV 393
+E D++VDFAPPVGY EP +
Sbjct: 196 LETDLSVDFAPPVGYEEPPRA 216
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ ++C+ V+M PG ERE+ GGK +PPSAL++LTRL+I YPMLF+LTN G+
Sbjct: 27 PRRFDEYFRCYPVAMMPGPEREEANHGGKAFLPPSALDKLTRLHITYPMLFELTNGTDGK 86
Query: 66 ITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
TH+GVLEF A+EGK+YLPYW ++S+ PG+
Sbjct: 87 RTHAGVLEFTAEEGKIYLPYWLMQTLSLEPGD 118
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ C+ V+M PG ERE+ GGK +PPSAL++LTRL+I YPMLF+LTN G+ TH+GVL
Sbjct: 34 FRCYPVAMMPGPEREEANHGGKAFLPPSALDKLTRLHITYPMLFELTNGTDGKRTHAGVL 93
Query: 145 ELDGKRKK 152
E + K
Sbjct: 94 EFTAEEGK 101
>gi|357138899|ref|XP_003571024.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Brachypodium distachyon]
Length = 422
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 158/236 (66%), Gaps = 5/236 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 120 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERASH 176
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 177 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 236
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP +A++IIE D VDFAPP+ Y E
Sbjct: 237 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDYKE 296
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSG-FVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE+ K + E F F G G RLDGK KD +G +P KR+
Sbjct: 297 PERPKPTAPPTAAPTAEAEAEEEPMFTPFTGPGRRLDGK-PSKDLDASGSSPAKRQ 351
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 120 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERASH 176
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 177 CGVLEFIAEEGMIYMPYW 194
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 124 YRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERASHCGVL 180
Query: 145 EL 146
E
Sbjct: 181 EF 182
>gi|192911936|gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guineensis]
Length = 320
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 163/255 (63%), Gaps = 26/255 (10%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNSATERVSH 71
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG+ V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 72 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDTVRVKNATLPKGTYVKLQPHTKDFLDISNPK 131
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP +A++IIE D VDFAPP+ Y E
Sbjct: 132 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDYKE 191
Query: 390 PEK-------------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK--RKKKDTV 434
PE+ V++ + + ++P F F G G RLDGK + + TV
Sbjct: 192 PERPQPSIPTSKAPVPVEDAQAEAEVEP--------KFTPFTGIGRRLDGKPLKHQAPTV 243
Query: 435 ETGGTPTKREYQRGI 449
+ + E G+
Sbjct: 244 SSSAKGQQSETTNGV 258
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNSATERVSH 71
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 72 CGVLEFIAEEGMIYMPYW 89
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 19 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNSATERVSHCGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|115444631|ref|NP_001046095.1| Os02g0181800 [Oryza sativa Japonica Group]
gi|49388027|dbj|BAD25143.1| putative ubiquitin fusion degradation protein [Oryza sativa
Japonica Group]
gi|113535626|dbj|BAF08009.1| Os02g0181800 [Oryza sativa Japonica Group]
gi|125581047|gb|EAZ21978.1| hypothetical protein OsJ_05633 [Oryza sativa Japonica Group]
Length = 315
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 158/236 (66%), Gaps = 5/236 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKEK-EEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE+ K + E F+ F G G RLDGK K V + +P KR+
Sbjct: 190 PERQKAAVPPSTAPTAEEAAEEEPKFIPFTGPGRRLDGKAPKDKDV-SASSPAKRQ 244
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|449464840|ref|XP_004150137.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 321
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 156/229 (68%), Gaps = 22/229 (9%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK-----------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK V+++E P + P+ F F G G RLDGK
Sbjct: 190 PEKPVPSLPTGKAPVQDEEP-----PAEAEPK---FNPFTGAGRRLDGK 230
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSH 69
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMP 110
GVLEF+A+EG +Y+PYW + + DV R + +P
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLL---QEGDVVRVKNVTLP 108
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|449526164|ref|XP_004170084.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 321
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 156/229 (68%), Gaps = 22/229 (9%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK-----------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK V+++E P + P+ F F G G RLDGK
Sbjct: 190 PEKPVPSLPTGKAPVQDEEP-----PAEAEPK---FNPFTGAGRRLDGK 230
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSH 69
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMP 110
GVLEF+A+EG +Y+PYW + + DV R + +P
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLL---QEGDVVRVKNVTLP 108
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|125538345|gb|EAY84740.1| hypothetical protein OsI_06110 [Oryza sativa Indica Group]
Length = 315
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 158/236 (66%), Gaps = 5/236 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKEK-EEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE+ K + E F+ F G G RLDGK K V + +P KR+
Sbjct: 190 PERQKAAVPPSTAPTAEEAAEEEPKFIPFTGPGRRLDGKAPKDKDV-SASSPAKRQ 244
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|116309678|emb|CAH66726.1| H0404F02.2 [Oryza sativa Indica Group]
gi|125549426|gb|EAY95248.1| hypothetical protein OsI_17067 [Oryza sativa Indica Group]
Length = 320
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 7/230 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG+ V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP +AV+IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKE----KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
PE ++ E D + + F F G+G RLDGK K E
Sbjct: 190 PENPQQPSVPASEATAEDENAKVGDELKFRPFTGSGKRLDGKASKLQATE 239
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 70 CGVLEFVAEEGMIIMPYW 87
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 17 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|356513060|ref|XP_003525232.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 316
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP A++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDTAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK + + + + EP F F GTG RLDGK
Sbjct: 190 PEKPTAPLSAGKAAVAAEVIPAEDEPK-FNPFSGTGRRLDGK 230
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|125591368|gb|EAZ31718.1| hypothetical protein OsJ_15868 [Oryza sativa Japonica Group]
Length = 384
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 7/230 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 77 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 133
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG+ V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 134 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISNPK 193
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP +AV+IIE D VDFAPP+ Y E
Sbjct: 194 AILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDYKE 253
Query: 390 PEKVKE----KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
PE ++ E D + + F F G+G RLDGK K E
Sbjct: 254 PENPQQPSVPASEATAEDENAKVEDELKFKPFTGSGKRLDGKASKLQATE 303
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 77 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 133
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 134 CGVLEFVAEEGMIIMPYW 151
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 81 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISHCGVL 137
Query: 145 EL 146
E
Sbjct: 138 EF 139
>gi|430813926|emb|CCJ28774.1| unnamed protein product [Pneumocystis jirovecii]
Length = 328
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 145/189 (76%), Gaps = 3/189 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y+C+SVSM GNER V GGK+I+PPS L +L+RLNI YPMLF+L N + RITH
Sbjct: 22 FRGYYRCYSVSMMEGNERNSVNFGGKVILPPSVLNKLSRLNISYPMLFELKNTEKDRITH 81
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG++YLP WMM+ LLL++G+L+++ S LP+ ++ K +PQ DFL IT+PK
Sbjct: 82 AGVLEFIAEEGRIYLPLWMMQTLLLEQGDLLSVVSTKLPLGSYVKIRPQHPDFLQITDPK 141
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLEN LRNF+ LT D+ INYN +IYE+ VL+ KP + ++++IE D+ +FAPP+G
Sbjct: 142 AVLENALRNFSALTKEDIFQINYNEQIYEIEVLDIKPDDGRGSISVIETDLEANFAPPLG 201
Query: 387 YTEPEKVKE 395
Y+EPE VK+
Sbjct: 202 YSEPEPVKK 210
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 61/78 (78%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y+C+SVSM GNER V GGK+I+PPS L +L+RLNI YPMLF+L N + RITH
Sbjct: 22 FRGYYRCYSVSMMEGNERNSVNFGGKVILPPSVLNKLSRLNISYPMLFELKNTEKDRITH 81
Query: 69 SGVLEFVADEGKVYLPYW 86
+GVLEF+A+EG++YLP W
Sbjct: 82 AGVLEFIAEEGRIYLPLW 99
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SVSM GNER V GGK+I+PPS L +L+RLNI YPMLF+L N + RITH+GVL
Sbjct: 26 YRCYSVSMMEGNERNSVNFGGKVILPPSVLNKLSRLNISYPMLFELKNTEKDRITHAGVL 85
Query: 145 EL 146
E
Sbjct: 86 EF 87
>gi|294463400|gb|ADE77231.1| unknown [Picea sitchensis]
Length = 314
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 152/224 (67%), Gaps = 11/224 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R +H
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHNPATQRRSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+N+LL+EG+ V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNMLLEEGDTVKVKNATLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LRNF+CLT+GD I + YN+K Y + ++E+KP +A+TIIE D VDFAPP+ Y E
Sbjct: 130 AVLETTLRNFSCLTTGDSIMVAYNNKKYYIDIIESKPASAITIIETDCEVDFAPPLDYKE 189
Query: 390 PEKV------KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+V K + D+ E F F G G RLDGK
Sbjct: 190 PERVPAVPAPAAKTTATQEESKDV--EEPKFTPFTGVGRRLDGK 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F +SY+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R +H
Sbjct: 13 FEQSYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHNPATQRRSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R +H GVL
Sbjct: 17 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHNPATQRRSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|345560367|gb|EGX43492.1| hypothetical protein AOL_s00215g228 [Arthrobotrys oligospora ATCC
24927]
Length = 403
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 150/216 (69%), Gaps = 5/216 (2%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M P RE++ GGK+IMPPSAL++LTRL+I YPMLF+L N K G++
Sbjct: 22 RRFDEYYRCYPVAMMP-TGRENLNYGGKVIMPPSALDKLTRLHISYPMLFELHNGK-GKL 79
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH GVLEFVA+EG++YLP W+M+ LLL+ G+L+ ++S LP +F K QPQ+ DFLDI++
Sbjct: 80 THCGVLEFVAEEGRIYLPQWIMQTLLLEPGDLMQVKSTDLPPGSFIKLQPQSVDFLDISD 139
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN LRNF+ LT D+ + +YN I+E+ VLE KP A++++E D+ VDFA P
Sbjct: 140 PKAVLENALRNFSALTKDDVFSFSYNDTIFEIAVLEVKPNVRNGAISVVETDIEVDFAAP 199
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGT 420
VGY EPE+ K N P + G A G
Sbjct: 200 VGYVEPERSKPASSVNSTRPSSALAGGVGANAGQGA 235
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M P RE++ GGK+IMPPSAL++LTRL+I YPMLF+L N K G++
Sbjct: 22 RRFDEYYRCYPVAMMP-TGRENLNYGGKVIMPPSALDKLTRLHISYPMLFELHNGK-GKL 79
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMF-PGN----EREDVERGGKIIMPPSALEQL 117
TH GVLEFVA+EG++YLP W + PG+ + D+ G I + P +++ L
Sbjct: 80 THCGVLEFVAEEGRIYLPQWIMQTLLLEPGDLMQVKSTDLPPGSFIKLQPQSVDFL 135
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M P RE++ GGK+IMPPSAL++LTRL+I YPMLF+L N K G++TH GVL
Sbjct: 28 YRCYPVAMMP-TGRENLNYGGKVIMPPSALDKLTRLHISYPMLFELHNGK-GKLTHCGVL 85
Query: 145 EL 146
E
Sbjct: 86 EF 87
>gi|255637543|gb|ACU19098.1| unknown [Glycine max]
Length = 316
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK + + + EP F F GTG RLDGK
Sbjct: 190 PEKPIAPLSAGKAAVAAEETPAEEEPK-FSPFSGTGRRLDGK 230
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|384250372|gb|EIE23851.1| UFD1-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 306
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 153/221 (69%), Gaps = 6/221 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y+C+ VS ++ + E G KI +P SAL++L L+I YPMLFK+ ++ GR TH
Sbjct: 6 FQAHYRCYPVSFM---DKPEAETGNKIFLPSSALDRLASLHIEYPMLFKVESRGNGRSTH 62
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG VY+PYWMM+NLL++EG +V + S +LP ++ K QP T DFLDI+NPK
Sbjct: 63 CGVLEFSADEGLVYMPYWMMQNLLVEEGSVVTVSSATLPKGSYVKLQPHTSDFLDISNPK 122
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LRNF+CLT GD I ++YN+K Y + ++E KP +A+++IE D VDFAPP+ Y E
Sbjct: 123 AVLEMTLRNFSCLTKGDCICLHYNNKKYYIDIIEAKPEDAISVIETDCEVDFAPPLDYVE 182
Query: 390 PEKVKEK-EEDNMIDPV--DLMPEPSGFVAFHGTGNRLDGK 427
P++V+ E D ++ PEP F+AF G G RLDG+
Sbjct: 183 PKRVERAPEPARTTDDAGPEVAPEPERFLAFVGPGRRLDGR 223
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y+C+ VS ++ + E G KI +P SAL++L L+I YPMLFK+ ++ GR TH
Sbjct: 6 FQAHYRCYPVSFM---DKPEAETGNKIFLPSSALDRLASLHIEYPMLFKVESRGNGRSTH 62
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG VY+PYW
Sbjct: 63 CGVLEFSADEGLVYMPYW 80
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 79 GKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 138
G Y C+ VS ++ + E G KI +P SAL++L L+I YPMLFK+ ++ GR
Sbjct: 4 GSFQAHYRCYPVSFM---DKPEAETGNKIFLPSSALDRLASLHIEYPMLFKVESRGNGRS 60
Query: 139 THSGVLEL 146
TH GVLE
Sbjct: 61 THCGVLEF 68
>gi|46452265|gb|AAS98216.1| ubiquitin fusion degradation protein [Triticum aestivum]
Length = 317
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 158/236 (66%), Gaps = 5/236 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNAAAERTSH 71
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYW+M+NLLL EG++V I++ +LP T+ K QP T DFLDI+NPK
Sbjct: 72 CGVLEFIAEEGMIYMPYWVMQNLLLREGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 131
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP +A++IIE D VDFAPP+ Y E
Sbjct: 132 AILEETLRNYSCLTTGDSIMVAYNNKGYYIDIVETKPASAISIIETDCEVDFAPPLDYKE 191
Query: 390 PEKVKEKEEDNMIDPVDLMPEPS-GFVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PE+ K + + E F F G G RLDGK KD + +P KR+
Sbjct: 192 PERPKPTAPPSADPAAEAQDEEEPKFSPFTGPGRRLDGK-PAKDLDASSSSPAKRQ 246
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H
Sbjct: 15 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNAAAERTSH 71
Query: 69 SGVLEFVADEGKVYLPYWCF 88
GVLEF+A+EG +Y+PYW
Sbjct: 72 CGVLEFIAEEGMIYMPYWVM 91
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF++ N R +H GVL
Sbjct: 19 YRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNAAAERTSHCGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|255543881|ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 356
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 149/221 (67%), Gaps = 6/221 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 48 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERISH 104
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM NLLL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 105 CGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPK 164
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 165 AILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 224
Query: 390 PEKVK---EKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ +++ F F G RLDGK
Sbjct: 225 PERTTPSIPQKKATAQVEEVPEETEPKFNPFTGVARRLDGK 265
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 48 FEQTYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERISH 104
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMP 110
GVLEF+A+EG +Y+PYW + + D+ R + +P
Sbjct: 105 CGVLEFIAEEGMIYMPYWMMENLLL---QEGDIVRVKNVTLP 143
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 52 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERISHCGVL 108
Query: 145 EL 146
E
Sbjct: 109 EF 110
>gi|222354865|gb|ACM48193.1| ubiquitin fusion degradation 1 protein [Triticum aestivum]
Length = 323
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 156/230 (67%), Gaps = 15/230 (6%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGVTDRISH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG++V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDIVRVKNATLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++E KP +AV+IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVEAKPASAVSIIETDCEVDFAPPLDYKE 189
Query: 390 PEKV--------KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKK 431
PEK K ED + ++ + F F G+G RLDGK K+
Sbjct: 190 PEKPQRPIVPAGKAPAEDQEV----IVEDEPKFKPFTGSGKRLDGKGPKQ 235
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGVTDRISH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 70 CGVLEFVAEEGMIIMPYW 87
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 17 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGVTDRISHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|320165244|gb|EFW42143.1| ubiquitin fusion degradaton protein [Capsaspora owczarzaki ATCC
30864]
Length = 368
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 163/255 (63%), Gaps = 35/255 (13%)
Query: 210 FNRSYKCFSVSMFPGNE---REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---- 262
F+ +++CF V+M +++E GGKII+PPSAL++LTRLNI YPMLF+++
Sbjct: 12 FSDNFRCFPVAMLAAKSVSMTQELETGGKIILPPSALDRLTRLNISYPMLFEISEYDEVL 71
Query: 263 --------KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
+G++TH+GVLEF+A+ G+VY+PYW+M NL + EG LV I S +L +++K
Sbjct: 72 SRDHPDAPAVGKVTHAGVLEFIAEPGRVYMPYWLMTNLGISEGSLVRIRSATLDPCSYTK 131
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIE 374
FQ Q +F++I+NPKAVLE LR FACLT GD IA++YN+KIYEL V + KP +AV+IIE
Sbjct: 132 FQWQDAEFMEISNPKAVLEKTLRKFACLTLGDTIAMHYNNKIYELRVTDLKPKSAVSIIE 191
Query: 375 CDMNVDFAPPVGYTEPE------KVKEKEEDNMIDPVDLMPEPSG--------------F 414
CDM VDF P Y EP+ K+ E+ ++ L P+G F
Sbjct: 192 CDMQVDFEAPPHYVEPDYKAQSAAAKQVAENQVLQRASLSQSPAGQTMLSLPEEEFSARF 251
Query: 415 VAFHGTGNRLDGKRK 429
AF G+G RLDGK++
Sbjct: 252 KAFSGSGARLDGKQR 266
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 65/96 (67%), Gaps = 15/96 (15%)
Query: 9 FNRSYKCFSVSMFPGNE---REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---- 61
F+ +++CF V+M +++E GGKII+PPSAL++LTRLNI YPMLF+++
Sbjct: 12 FSDNFRCFPVAMLAAKSVSMTQELETGGKIILPPSALDRLTRLNISYPMLFEISEYDEVL 71
Query: 62 --------KMGRITHSGVLEFVADEGKVYLPYWCFS 89
+G++TH+GVLEF+A+ G+VY+PYW +
Sbjct: 72 SRDHPDAPAVGKVTHAGVLEFIAEPGRVYMPYWLMT 107
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 15/77 (19%)
Query: 85 YWCFSVSMFPGNE---REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ-------- 133
+ CF V+M +++E GGKII+PPSAL++LTRLNI YPMLF+++
Sbjct: 16 FRCFPVAMLAAKSVSMTQELETGGKIILPPSALDRLTRLNISYPMLFEISEYDEVLSRDH 75
Query: 134 ----KMGRITHSGVLEL 146
+G++TH+GVLE
Sbjct: 76 PDAPAVGKVTHAGVLEF 92
>gi|356524503|ref|XP_003530868.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 316
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK + + + EP F F GTG RLDGK
Sbjct: 190 PEKPIAPLSAGKAAVAAEETPAEEEPK-FNPFSGTGRRLDGK 230
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|255646036|gb|ACU23505.1| unknown [Glycine max]
Length = 316
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP T+ K QP T DFLDI++PK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISDPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRNF+CLT+GD I + YN+K Y + ++ETKP A++IIE D VDFAPP+ Y E
Sbjct: 130 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDTAISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK----VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK + + + + EP F F GTG RLDGK
Sbjct: 190 PEKPTAPLSAGKAAVAAEVIPAEDEPK-FNPFSGTGRRLDGK 230
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQIYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGMIYMPYW 87
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|297797880|ref|XP_002866824.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312660|gb|EFH43083.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 313
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 152/224 (67%), Gaps = 12/224 (5%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELRNASTDRVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG +V + +V+LP T+ K QP T DFLDI NPK
Sbjct: 70 CGVLEFIAEEGVIYMPYWMMQNLLLQEGNIVRVRNVTLPKGTYVKLQPHTTDFLDIANPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT GD I + YN+K Y + ++E KP N ++IIE D VDFAPP+ Y +
Sbjct: 130 AILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNCISIIETDCEVDFAPPLDYKD 189
Query: 390 PEK------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ K + + N + + P+ F F G+G RLDG+
Sbjct: 190 PERPVVPASAKGQAKANEVAVAEAEPK---FNPFTGSGRRLDGR 230
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELRNASTDRVSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGVIYMPYW 87
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPSSFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELRNASTDRVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|328768466|gb|EGF78512.1| hypothetical protein BATDEDRAFT_4457, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Query: 214 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 273
Y+CFS++M PGN+++ GGK+ MPPSAL +L+ L+I YPM+F++ N + TH+GVL
Sbjct: 4 YRCFSIAMLPGNDKKSANYGGKVFMPPSALAKLSSLHIEYPMIFEIKNNSLPNKTHAGVL 63
Query: 274 EFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLE 333
EF+A+EG+VY+P WMM+ LLL EG+LV + S SLP+ F K QPQ+ FLDIT+PKAVLE
Sbjct: 64 EFIAEEGRVYIPNWMMQTLLLQEGQLVQMRSTSLPLGKFVKIQPQSVAFLDITDPKAVLE 123
Query: 334 NCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPE 391
R+F LT GD+I+INYN K+Y++ ++ETKP GN ++IIE D+ VDFA P+GY +PE
Sbjct: 124 QAFRSFTTLTQGDIISINYNDKLYDILLMETKPDGNGISIIETDLEVDFAAPLGYVDPE 182
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 58/74 (78%)
Query: 13 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 72
Y+CFS++M PGN+++ GGK+ MPPSAL +L+ L+I YPM+F++ N + TH+GVL
Sbjct: 4 YRCFSIAMLPGNDKKSANYGGKVFMPPSALAKLSSLHIEYPMIFEIKNNSLPNKTHAGVL 63
Query: 73 EFVADEGKVYLPYW 86
EF+A+EG+VY+P W
Sbjct: 64 EFIAEEGRVYIPNW 77
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFS++M PGN+++ GGK+ MPPSAL +L+ L+I YPM+F++ N + TH+GVL
Sbjct: 4 YRCFSIAMLPGNDKKSANYGGKVFMPPSALAKLSSLHIEYPMIFEIKNNSLPNKTHAGVL 63
Query: 145 EL 146
E
Sbjct: 64 EF 65
>gi|356557947|ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 318
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 162/241 (67%), Gaps = 9/241 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH
Sbjct: 12 FEQFYRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTH 68
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFV+DEG +Y+PYWMM N+LL EG++V +++ +L T+ K QP T DFLDI+NPK
Sbjct: 69 CGVLEFVSDEGIIYIPYWMMENMLLQEGDIVKVKNTNLAKGTYVKLQPHTKDFLDISNPK 128
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR+++CLT+GD I + YN+K Y + ++ETKP AV+IIE D VDFAPP+ Y E
Sbjct: 129 AILETTLRSYSCLTTGDTIMVPYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPPLDYKE 188
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVA----FHGTGNRLDGKRKKKDTVETGGTPTKREY 445
PEK + + P + EP +A F G+G RLDGK +VE +P ++
Sbjct: 189 PEKQAKPVVFDRKRP-KVEDEPPTKIARLTPFTGSGRRLDGK-PSAPSVEQTSSPELKQR 246
Query: 446 Q 446
Q
Sbjct: 247 Q 247
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH
Sbjct: 12 FEQFYRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTH 68
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFV+DEG +Y+PYW
Sbjct: 69 CGVLEFVSDEGIIYIPYW 86
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH GVL
Sbjct: 16 YRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTHCGVL 72
Query: 145 EL 146
E
Sbjct: 73 EF 74
>gi|302754576|ref|XP_002960712.1| hypothetical protein SELMODRAFT_74563 [Selaginella moellendorffii]
gi|300171651|gb|EFJ38251.1| hypothetical protein SELMODRAFT_74563 [Selaginella moellendorffii]
Length = 309
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 150/222 (67%), Gaps = 5/222 (2%)
Query: 209 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
PF ++Y+C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +
Sbjct: 16 PFEQNYRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPATSRTS 72
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG + +PYWMM+NLLL EG+LV ++S +LP ++ K QP T DFLDI+NP
Sbjct: 73 HCGVLEFVADEGIIIMPYWMMQNLLLQEGDLVRVKSATLPKGSYVKLQPHTKDFLDISNP 132
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLE LRNF+CLT GD I + YN+K Y + ++E KP A++IIE D VDFAPP+ Y
Sbjct: 133 KAVLETTLRNFSCLTVGDNIMVAYNNKKYYIDIVEAKPAPAISIIETDCEVDFAPPLDYK 192
Query: 389 EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
EPE+ ++ D EP F AF G G RLDGK K
Sbjct: 193 EPERAAPPQQPPAAATGD-KSEPK-FNAFTGVGRRLDGKAPK 232
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
PF ++Y+C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +
Sbjct: 16 PFEQNYRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPATSRTS 72
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG + +PYW
Sbjct: 73 HCGVLEFVADEGIIIMPYW 91
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +H GVL
Sbjct: 21 YRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPATSRTSHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|42570967|ref|NP_973557.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
gi|44917441|gb|AAS49045.1| At2g29070 [Arabidopsis thaliana]
gi|45773886|gb|AAS76747.1| At2g29070 [Arabidopsis thaliana]
gi|111609944|gb|ABH11522.1| UFD1c [synthetic construct]
gi|330253112|gb|AEC08206.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
Length = 312
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 159/233 (68%), Gaps = 24/233 (10%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H
Sbjct: 8 FEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG VYLPYWMM+N+ L+EG+++ ++++SL T+ K QP T DFLDI+NPK
Sbjct: 65 CGVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPK 124
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR+++CLT+GD I + YN+K Y + V+E KP +AV+IIE D VDFAPP+ Y E
Sbjct: 125 AILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKE 184
Query: 390 PEK-------------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
PEK VKE+EE P +P+ F F G+G RLDGK +
Sbjct: 185 PEKPQKLTPSNKRPLQVKEEEE-----PASKVPK---FTPFTGSGKRLDGKAQ 229
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H
Sbjct: 8 FEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG VYLPYW
Sbjct: 65 CGVLEFTADEGLVYLPYW 82
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H GVL
Sbjct: 12 YRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVL 68
Query: 145 EL 146
E
Sbjct: 69 EF 70
>gi|226287987|gb|EEH43500.1| ubiquitin fusion degradation protein [Paracoccidioides brasiliensis
Pb18]
Length = 362
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
K+YLP+W+M+ LLL+ G+ V ++S LP + K Q Q+ FLDI++PKAVLEN RNF+
Sbjct: 61 KIYLPFWLMQTLLLEPGDFVQVKSTDLPPGRYIKLQAQSTSFLDISDPKAVLENAFRNFS 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEK 392
CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFA PVGY EP++
Sbjct: 121 CLTKGDIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKR 175
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEG 60
Query: 80 KVYLPYWCFSVSMF-PGN 96
K+YLP+W + PG+
Sbjct: 61 KIYLPFWLMQTLLLEPGD 78
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLE
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEF 55
>gi|225678983|gb|EEH17267.1| ubiquitin fusion degradation protein [Paracoccidioides brasiliensis
Pb03]
Length = 362
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
K+YLP+W+M+ LLL+ G+ V ++S LP + K Q Q+ FLDI++PKAVLEN RNF+
Sbjct: 61 KIYLPFWLMQTLLLEPGDFVQVKSTDLPPGRYIKLQAQSTSFLDISDPKAVLENAFRNFS 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEK 392
CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFA PVGY EP++
Sbjct: 121 CLTKGDIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKR 175
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEG 60
Query: 80 KVYLPYWCFSVSMF-PGN 96
K+YLP+W + PG+
Sbjct: 61 KIYLPFWLMQTLLLEPGD 78
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF++ N + R+TH+GVLE
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEF 55
>gi|76160972|gb|ABA40449.1| unknown [Solanum tuberosum]
Length = 316
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 152/229 (66%), Gaps = 11/229 (4%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R+
Sbjct: 11 RSFEQTYRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNDSTERV 67
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
+H GVLEF+A+EG +Y+PYWMM NL L EG++V +++V+LP + K QP T DFLDI+N
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENLCLQEGDIVTVKNVTLPKGKYVKLQPHTKDFLDISN 127
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY 387
PKA+LE LRNF+CLT+GD I + YN+K Y + ++ETKP N ++IIE D VDFAPP+ Y
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNGISIIETDCEVDFAPPLDY 187
Query: 388 TEPEKVKEKEEDN-----MIDPVDLMPEPSGFVAFHGTGNRLDGKRKKK 431
EPE+ N D ++ P+ F F G RLDGK K+
Sbjct: 188 KEPERTAPSRPSNSPAEVQEDATEVEPK---FYPFTGGARRLDGKPLKQ 233
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R+
Sbjct: 11 RSFEQTYRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNDSTERV 67
Query: 67 THSGVLEFVADEGKVYLPYW 86
+H GVLEF+A+EG +Y+PYW
Sbjct: 68 SHCGVLEFIAEEGMIYMPYW 87
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNDSTERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|218202383|gb|EEC84810.1| hypothetical protein OsI_31880 [Oryza sativa Indica Group]
Length = 330
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 151/228 (66%), Gaps = 10/228 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGR 266
F ++Y+C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R
Sbjct: 17 FEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHR 73
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+TH GVLEFVADEG V +P WMMR + LD+G LV + S SLP +++K QP T DFLD
Sbjct: 74 VTHCGVLEFVADEGTVIMPRWMMRGMRLDDGGLVVVRSASLPKGSYAKLQPHTGDFLDTA 133
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKAVLE LR+F CLT+GD I + YN+K + + ++ETKP +AV IIE D VDFAPP+
Sbjct: 134 NPKAVLEKTLRSFTCLTTGDTIMVAYNNKEFLIDIIETKPASAVCIIETDCEVDFAPPLD 193
Query: 387 YTEPEKVKEK----EEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
Y EPEKV++K + D + + F AF G+GNRLDGK K
Sbjct: 194 YKEPEKVQQKPSVPSSKAASEDQDQIKDEPEFRAFTGSGNRLDGKASK 241
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 14/109 (12%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGR 65
F ++Y+C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R
Sbjct: 17 FEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHR 73
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
+TH GVLEFVADEG V +P W M G +D GG +++ ++L
Sbjct: 74 VTHCGVLEFVADEGTVIMPRW-----MMRGMRLDD---GGLVVVRSASL 114
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGRITHS 141
Y C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R+TH
Sbjct: 21 YRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHRVTHC 77
Query: 142 GVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIK-PASAHKEFQFGF 200
GVLE + G R RG+ D LV +R+ P ++ + Q
Sbjct: 78 GVLEF--------VADEGTVIMPRWMMRGMRLDD---GGLVVVRSASLPKGSYAKLQPHT 126
Query: 201 NMFPDIPRPFN------RSYKCFSV 219
F D P RS+ C +
Sbjct: 127 GDFLDTANPKAVLEKTLRSFTCLTT 151
>gi|222641841|gb|EEE69973.1| hypothetical protein OsJ_29866 [Oryza sativa Japonica Group]
Length = 330
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 151/228 (66%), Gaps = 10/228 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGR 266
F ++Y+C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R
Sbjct: 17 FEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHR 73
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+TH GVLEFVADEG V +P WMMR + LD+G LV + S SLP +++K QP T DFLD
Sbjct: 74 VTHCGVLEFVADEGTVIMPRWMMRGMRLDDGGLVVVRSASLPKGSYAKLQPHTGDFLDTA 133
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKAVLE LR+F CLT+GD I + YN+K + + ++ETKP +AV IIE D VDFAPP+
Sbjct: 134 NPKAVLEKTLRSFTCLTTGDTIMVAYNNKEFLIDIVETKPASAVCIIETDCEVDFAPPLD 193
Query: 387 YTEPEKVKEK----EEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
Y EPEKV++K + D + + F AF G+GNRLDGK K
Sbjct: 194 YKEPEKVQQKPSVPSSKAASEDQDQIKDEPEFRAFTGSGNRLDGKASK 241
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 14/109 (12%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGR 65
F ++Y+C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R
Sbjct: 17 FEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHR 73
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSAL 114
+TH GVLEFVADEG V +P W M G +D GG +++ ++L
Sbjct: 74 VTHCGVLEFVADEGTVIMPRW-----MMRGMRLDD---GGLVVVRSASL 114
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGRITHS 141
Y C+S + F + +E G K+IMP SAL +L L+I YPMLF+L++ R+TH
Sbjct: 21 YRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHRVTHC 77
Query: 142 GVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIK-PASAHKEFQFGF 200
GVLE + G R RG+ D LV +R+ P ++ + Q
Sbjct: 78 GVLEF--------VADEGTVIMPRWMMRGMRLDD---GGLVVVRSASLPKGSYAKLQPHT 126
Query: 201 NMFPDIPRPFN------RSYKCFSV 219
F D P RS+ C +
Sbjct: 127 GDFLDTANPKAVLEKTLRSFTCLTT 151
>gi|297822635|ref|XP_002879200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325039|gb|EFH55459.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 158/233 (67%), Gaps = 24/233 (10%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H
Sbjct: 8 FEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG VYLPYWMM+N+ L EG+++ ++++SL T+ K QP T DFLDI+NPK
Sbjct: 65 CGVLEFSADEGLVYLPYWMMQNMSLQEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPK 124
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR+++CLT+GD I + YN+K Y + V+E KP +AV+IIE D VDFAPP+ Y E
Sbjct: 125 AILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKE 184
Query: 390 PEK-------------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
PEK VKE+EE P +P+ F F G+G RLDGK +
Sbjct: 185 PEKLQKLTPSNKRPLEVKEEEE-----PASKVPK---FTPFTGSGKRLDGKAQ 229
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H
Sbjct: 8 FEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG VYLPYW
Sbjct: 65 CGVLEFSADEGLVYLPYW 82
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+ ++ +E+G KIIMPPSAL++L L+I YPMLF+L+N + + +H GVL
Sbjct: 12 YRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVL 68
Query: 145 ELDG 148
E
Sbjct: 69 EFSA 72
>gi|239613550|gb|EEQ90537.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
ER-3]
Length = 366
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVRDRTTHAGVLEFIAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
K+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI++PKAVLEN RNF+
Sbjct: 61 KIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFS 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEKV 393
CL+ GD+ +YN +IYE+ VLETKP +A++++E D+ VDFA P+GY EP++V
Sbjct: 121 CLSKGDIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLEVDFATPIGYEEPKRV 176
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVRDRTTHAGVLEFIAEEG 60
Query: 80 KVYLPYWCFSVSMF-PGN 96
K+YLP+W + PG+
Sbjct: 61 KIYLPFWIMQTLLLEPGD 78
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLE
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVRDRTTHAGVLEF 55
>gi|67516095|ref|XP_657933.1| hypothetical protein AN0329.2 [Aspergillus nidulans FGSC A4]
gi|40746579|gb|EAA65735.1| hypothetical protein AN0329.2 [Aspergillus nidulans FGSC A4]
gi|259489438|tpe|CBF89710.1| TPA: ubiquitin fusion degradation protein Ufd1, putative
(AFU_orthologue; AFUA_1G02430) [Aspergillus nidulans
FGSC A4]
Length = 393
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 134/174 (77%), Gaps = 3/174 (1%)
Query: 222 FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGK 281
PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N +++H+GVLEF+A+EGK
Sbjct: 1 MPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKEKMSHAGVLEFIAEEGK 60
Query: 282 VYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFAC 341
+YLPYW+M+ LLL+ G+LV I+S LP F K Q Q+ FLDI++PKAVLEN RNF+C
Sbjct: 61 IYLPYWLMQTLLLEPGDLVQIKSTDLPPGRFIKLQAQSTSFLDISDPKAVLENAFRNFSC 120
Query: 342 LTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPPVGYTEPEK 392
LT D+ YN ++YE+ VLETKP NA++++E D+ VDFAPPVGY EP++
Sbjct: 121 LTKDDVFTFAYNDQVYEMAVLETKPANDTNAISVLETDLEVDFAPPVGYEEPQR 174
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 21 FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGK 80
PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N +++H+GVLEF+A+EGK
Sbjct: 1 MPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKEKMSHAGVLEFIAEEGK 60
Query: 81 VYLPYWCFSVSMF-PGN 96
+YLPYW + PG+
Sbjct: 61 IYLPYWLMQTLLLEPGD 77
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 93 FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRKK 152
PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N +++H+GVLE + K
Sbjct: 1 MPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKEKMSHAGVLEFIAEEGK 60
>gi|154288476|ref|XP_001545033.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408674|gb|EDN04215.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 361
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%), Gaps = 3/178 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVLEFIAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
K+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI++PKAVLEN RNF+
Sbjct: 61 KIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFS 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEKVKE 395
CL+ D+ +YN IYE+ VLETKP NA++++E D+ VDFA PVGY EP+++ E
Sbjct: 121 CLSKDDIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKRINE 178
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVLEFIAEEG 60
Query: 80 KVYLPYWCFSVSMF-PGN 96
K+YLP+W + PG+
Sbjct: 61 KIYLPFWIMQTLLLEPGD 78
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N+ R TH+GVLE
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVLEF 55
>gi|115460058|ref|NP_001053629.1| Os04g0577000 [Oryza sativa Japonica Group]
gi|38345534|emb|CAD41304.2| OSJNBa0020J04.9 [Oryza sativa Japonica Group]
gi|113565200|dbj|BAF15543.1| Os04g0577000 [Oryza sativa Japonica Group]
Length = 320
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 7/230 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG + +PYWMM+N+LL EG+ V +++ +LP T+ K QP T DFLDI+NPK
Sbjct: 70 CGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR +C+T+GD I + YN+K Y + ++ETKP +AV+IIE D VDFAPP+ Y E
Sbjct: 130 AILEKTLRKLSCITTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDYKE 189
Query: 390 PEKVKE----KEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
PE ++ E D + + F F G+G RLDGK K E
Sbjct: 190 PENPQQPSVPASEATAEDENAKVEDELKFKPFTGSGKRLDGKASKLQATE 239
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H
Sbjct: 13 FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG + +PYW
Sbjct: 70 CGVLEFVAEEGMIIMPYW 87
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S F ++ +E G K+IMPPSAL++L L+I YPMLF+L N RI+H GVL
Sbjct: 17 YRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRISHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|213409447|ref|XP_002175494.1| ubiquitin fusion degradation protein [Schizosaccharomyces japonicus
yFS275]
gi|212003541|gb|EEB09201.1| ubiquitin fusion degradation protein [Schizosaccharomyces japonicus
yFS275]
Length = 335
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 168/255 (65%), Gaps = 19/255 (7%)
Query: 195 EFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYP 254
+FQ F ++ F+ Y+C+ +M PG ER ++ GGK+I+PPSALE+L+RLNI YP
Sbjct: 4 QFQNAFASNANLT--FDTYYRCYPTAMLPGEERPNLNYGGKVILPPSALEKLSRLNISYP 61
Query: 255 MLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
MLF+ N++ G+ TH GVLEF+ADEG+VYLP+WMM L + G+L+ + + + +F K
Sbjct: 62 MLFEFQNKQTGQRTHGGVLEFIADEGRVYLPHWMMSTLGVQPGDLIRVINTDIQQGSFVK 121
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VT 371
QPQ+ +FLDITN +AVLE+ LR+F+ LT GD+I I YN ++Y+L VLE KP + ++
Sbjct: 122 LQPQSSNFLDITNHRAVLESALRDFSTLTQGDVIEILYNDQVYKLAVLEVKPEDGRGVIS 181
Query: 372 IIECDMNVDFAPPVGYTEPEKVKEKE----------EDNMIDPV---DLMPEPSGFVAFH 418
++E D+ VDFAPPVGY + + K++E E M + +L+ + S A H
Sbjct: 182 VVETDLVVDFAPPVGYEQEMQRKQQEMAKSKVPPSVEGTMAKRIHYDELVAKGSSLSA-H 240
Query: 419 GTGNRLDGKRKKKDT 433
G+G++L+GK K +
Sbjct: 241 GSGSKLNGKGTKSKS 255
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ +M PG ER ++ GGK+I+PPSALE+L+RLNI YPMLF+ N++ G+ TH
Sbjct: 17 FDTYYRCYPTAMLPGEERPNLNYGGKVILPPSALEKLSRLNISYPMLFEFQNKQTGQRTH 76
Query: 69 SGVLEFVADEGKVYLPYWCFS-VSMFPGNE----REDVERGGKIIMPPSA 113
GVLEF+ADEG+VYLP+W S + + PG+ D+++G + + P +
Sbjct: 77 GGVLEFIADEGRVYLPHWMMSTLGVQPGDLIRVINTDIQQGSFVKLQPQS 126
>gi|302804412|ref|XP_002983958.1| hypothetical protein SELMODRAFT_119522 [Selaginella moellendorffii]
gi|300148310|gb|EFJ14970.1| hypothetical protein SELMODRAFT_119522 [Selaginella moellendorffii]
Length = 314
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 149/225 (66%), Gaps = 6/225 (2%)
Query: 209 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
PF ++Y+C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +
Sbjct: 16 PFEQNYRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPSTSRTS 72
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG + +PYWMM+NLLL EG+LV ++S +LP ++ K QP T DFLDI+NP
Sbjct: 73 HCGVLEFVADEGIIIMPYWMMQNLLLQEGDLVRVKSATLPKGSYVKLQPHTKDFLDISNP 132
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLE LRNF+CLT GD I + YN+K Y + ++E KP A++IIE D VDFAPP+ Y
Sbjct: 133 KAVLETTLRNFSCLTVGDNIMVAYNNKKYYIDIVEAKPAPAISIIETDCEVDFAPPLDYK 192
Query: 389 EPEKV---KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
EPE+ ++ D E F AF G G RLDGK K
Sbjct: 193 EPERAVPPQQPPAAATADGEAEAAEEPKFNAFTGVGRRLDGKAPK 237
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
PF ++Y+C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +
Sbjct: 16 PFEQNYRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPSTSRTS 72
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG + +PYW
Sbjct: 73 HCGVLEFVADEGIIIMPYW 91
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S S ++ +E G K+IMPPSAL++L L I YPMLF++ N R +H GVL
Sbjct: 21 YRCYSASFI---DKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPSTSRTSHCGVL 77
Query: 145 EL 146
E
Sbjct: 78 EF 79
>gi|361128685|gb|EHL00615.1| putative Ubiquitin fusion degradation protein 1 [Glarea lozoyensis
74030]
Length = 392
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ M PG R+++ GGKIIMPPSALE+LTRL+I YPMLF+L N + GR TH
Sbjct: 37 FDEYYRCYPTVMLPGPNRDNLNYGGKIIMPPSALEKLTRLHITYPMLFELLNGQEGRHTH 96
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A EG+VY+P WMM+ L LD+G+++ I+S L ATF K QPQ +FLDI++PK
Sbjct: 97 AGVLEFIAAEGRVYIPRWMMKTLKLDDGDMIQIKSTDLAPATFVKLQPQNKNFLDISDPK 156
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE R+FA +T GD+ + YN +Y++ V+ETKP + V+++E D+ VDFAPPVG
Sbjct: 157 AVLEKAFRDFATVTKGDIFSFTYNDTVYDIAVIETKPKSDKMGVSMLETDVEVDFAPPVG 216
Query: 387 YTEPEKVK 394
Y EP +
Sbjct: 217 YVEPTSTR 224
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 61/78 (78%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ M PG R+++ GGKIIMPPSALE+LTRL+I YPMLF+L N + GR TH
Sbjct: 37 FDEYYRCYPTVMLPGPNRDNLNYGGKIIMPPSALEKLTRLHITYPMLFELLNGQEGRHTH 96
Query: 69 SGVLEFVADEGKVYLPYW 86
+GVLEF+A EG+VY+P W
Sbjct: 97 AGVLEFIAAEGRVYIPRW 114
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ M PG R+++ GGKIIMPPSALE+LTRL+I YPMLF+L N + GR TH+GVL
Sbjct: 41 YRCYPTVMLPGPNRDNLNYGGKIIMPPSALEKLTRLHITYPMLFELLNGQEGRHTHAGVL 100
Query: 145 EL 146
E
Sbjct: 101 EF 102
>gi|209879537|ref|XP_002141209.1| ubiquitin fusion degradation protein 1 [Cryptosporidium muris RN66]
gi|209556815|gb|EEA06860.1| ubiquitin fusion degradation protein 1, putative [Cryptosporidium
muris RN66]
Length = 300
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 154/234 (65%), Gaps = 14/234 (5%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F G++ P + PF+ Y C+ VS F G R+++E G KI++PPSAL QL R NI +PM
Sbjct: 13 FASGYDGDP-LSSPFSHEYSCYPVS-FAG--RDELEAGNKILLPPSALNQLARRNISWPM 68
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFK+ N ++THSGVLEFVA+EG Y+PYWMM+NL L EG++VNI + SL T+ K
Sbjct: 69 LFKVQNSLKHKVTHSGVLEFVAEEGTCYMPYWMMQNLELQEGDIVNITNTSLSKGTYVKL 128
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QP + +FLDITNPKAVLE LR FA LT GD I I YN Y++ +LETKP NA++IIE
Sbjct: 129 QPLSMEFLDITNPKAVLETALRGFATLTIGDTIVIQYNDASYKVEILETKPTNAISIIET 188
Query: 376 DMNVDFAPPVGYTEP--EKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
D+ VDFAPP Y EP +++ ++ + + + F G G RLDGK
Sbjct: 189 DIQVDFAPPPDYVEPGVQQIATTSDEFLGTSRETL--------FSGYGQRLDGK 234
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+ PF+ Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLFK+ N
Sbjct: 22 LSSPFSHEYSCYPVS-FAG--RDELEAGNKILLPPSALNQLARRNISWPMLFKVQNSLKH 78
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
++THSGVLEFVA+EG Y+PYW
Sbjct: 79 KVTHSGVLEFVAEEGTCYMPYW 100
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLFK+ N ++THSGVL
Sbjct: 30 YSCYPVS-FAG--RDELEAGNKILLPPSALNQLARRNISWPMLFKVQNSLKHKVTHSGVL 86
Query: 145 EL 146
E
Sbjct: 87 EF 88
>gi|18420341|ref|NP_568048.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|16930497|gb|AAL31934.1|AF419602_1 AT4g38930/F19H22_30 [Arabidopsis thaliana]
gi|22135779|gb|AAM91046.1| AT4g38930/F19H22_30 [Arabidopsis thaliana]
gi|62320416|dbj|BAD94866.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|111609942|gb|ABH11521.1| UFD1b [synthetic construct]
gi|332661594|gb|AEE86994.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 311
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 147/224 (65%), Gaps = 16/224 (7%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI NPK
Sbjct: 70 CGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTDFLDIANPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT GD I + YN+K Y + ++E KP N ++IIE D VDFAPP+ Y E
Sbjct: 130 AILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ K KE VD+ F F G+G RLDG+
Sbjct: 190 PERPVAPAPAKAKE-------VDVAEAEPKFNPFTGSGRRLDGR 226
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGVIYIPYW 87
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H GVL
Sbjct: 17 YRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|357472787|ref|XP_003606678.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507733|gb|AES88875.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 389
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 156/243 (64%), Gaps = 13/243 (5%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y CFSVS R +E G KIIMP SAL++L RLNI YPMLF+L N R TH
Sbjct: 93 FEHVYSCFSVSSL---NRPILENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTTH 149
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG V+LP WMM ++LL EG+LV+++S SL F KFQP + DFLDI+NPK
Sbjct: 150 CGVLEFTADEGIVFLPNWMMEDMLLQEGDLVSLKSTSLEKGKFVKFQPHSKDFLDISNPK 209
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR+++CLT+G I I YN+K Y + V+ETKP A++IIE D VDFAPP+ Y E
Sbjct: 210 AMLETSLRSYSCLTTGRTIMIPYNNKKYYIDVVETKPSPAISIIEIDCEVDFAPPLDYKE 269
Query: 390 PEK------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKR 443
PEK +K +P +P+ + F G+G RLDGK + ++E TP +
Sbjct: 270 PEKPLPSDLSHKKHRQVEEEPPTKVPK---LIPFSGSGRRLDGKPSAQ-SIEQTSTPIIK 325
Query: 444 EYQ 446
+ Q
Sbjct: 326 QQQ 328
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y CFSVS R +E G KIIMP SAL++L RLNI YPMLF+L N R TH
Sbjct: 93 FEHVYSCFSVSSL---NRPILENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTTH 149
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG V+LP W
Sbjct: 150 CGVLEFTADEGIVFLPNW 167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYP 125
I H+ + E V Y CFSVS R +E G KIIMP SAL++L RLNI YP
Sbjct: 87 IRHNEIFEHV---------YSCFSVSSL---NRPILENGDKIIMPSSALDRLARLNIEYP 134
Query: 126 MLFKLTNQKMGRITHSGVLEL 146
MLF+L N R TH GVLE
Sbjct: 135 MLFELRNTSAERTTHCGVLEF 155
>gi|78191476|gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanum tuberosum]
Length = 315
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 149/227 (65%), Gaps = 5/227 (2%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R+
Sbjct: 11 RSFEQTYRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERV 67
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
+H GVLEF+A+EG +Y+PYWMM NL L EG+ V +++V+LP + K QP T DFLDI+N
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENLFLQEGDTVTVKNVTLPKGKYVKLQPHTKDFLDISN 127
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY 387
PKA+LE LRNF+CLT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 187
Query: 388 TEPEKV--KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKD 432
EPE+V + F F G RLDGK K++
Sbjct: 188 KEPERVAPSRPSKAPAEVEEAAAEVEPKFNPFTGGARRLDGKPLKQE 234
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F ++Y+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R+
Sbjct: 11 RSFEQTYRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERV 67
Query: 67 THSGVLEFVADEGKVYLPYW 86
+H GVLEF+A+EG +Y+PYW
Sbjct: 68 SHCGVLEFIAEEGMIYMPYW 87
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVL
Sbjct: 17 YRCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERVSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|42573225|ref|NP_974709.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|4539312|emb|CAB38813.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|7270876|emb|CAB80556.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|332661595|gb|AEE86995.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 315
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 12/224 (5%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM+NLLL EG++V + +V+LP T+ K QP T DFLDI NPK
Sbjct: 70 CGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTDFLDIANPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LRN++CLT GD I + YN+K Y + ++E KP N ++IIE D VDFAPP+ Y E
Sbjct: 130 AILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDFAPPLDYKE 189
Query: 390 PEK------VKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PE+ K + + +D + P+ F F G+G RLDG+
Sbjct: 190 PERPVAPAPAKGEAKAKEVDVAEAEPK---FNPFTGSGRRLDGR 230
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H
Sbjct: 13 FEQTYRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSH 69
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 70 CGVLEFIAEEGVIYIPYW 87
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E G KIIMPPSAL++L L I YPMLF+L N +H GVL
Sbjct: 17 YRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSFSHCGVL 73
Query: 145 EL 146
E
Sbjct: 74 EF 75
>gi|261194445|ref|XP_002623627.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
SLH14081]
gi|239588165|gb|EEQ70808.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
SLH14081]
Length = 299
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ERE+V GGK+IMPPSAL++LTRL+I YPM+F+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMIFELHNRVKDRTTHAGVLEFIAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
K+YLP+W+M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI++PKAVLEN RNF+
Sbjct: 61 KIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFS 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEKV 393
CL+ GD+ +YN +IYE+ VLETKP +A++++E D+ VDFA P+GY EP++V
Sbjct: 121 CLSKGDIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLEVDFATPIGYEEPKRV 176
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ERE+V GGK+IMPPSAL++LTRL+I YPM+F+L N+ R TH+GVLEF+A+EG
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMIFELHNRVKDRTTHAGVLEFIAEEG 60
Query: 80 KVYLPYWCFSVSMF-PGN 96
K+YLP+W + PG+
Sbjct: 61 KIYLPFWIMQTLLLEPGD 78
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRK 151
M PG ERE+V GGK+IMPPSAL++LTRL+I YPM+F+L N+ R TH+GVLE +
Sbjct: 1 MLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMIFELHNRVKDRTTHAGVLEFIAEEG 60
Query: 152 K 152
K
Sbjct: 61 K 61
>gi|402225223|gb|EJU05284.1| UFD1-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 378
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 149/238 (62%), Gaps = 13/238 (5%)
Query: 206 IPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
+PRP F+ ++ +SV+M ER +V GGKIIMPPSAL LTRL+I P +F+L N
Sbjct: 1 MPRPPARAFDEYFRAYSVAMLNQKERANVSYGGKIIMPPSALASLTRLDIEAPWMFQLRN 60
Query: 262 -QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
THSGVLEF+ADEG VYLPYWMM+ L L EG+ + I LP T K Q QT
Sbjct: 61 PSNSAATTHSGVLEFIADEGCVYLPYWMMKTLRLAEGDAIRITGAVLPKGTLVKLQAQTV 120
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNV 379
DFLD++ PKAVLE RN++ LT GD+I I YN +EL V+E +P G A+ II+ D++V
Sbjct: 121 DFLDVSEPKAVLEQSFRNYSALTMGDIIEIAYNGLTFELLVMEVQPLGQAINIIDVDLSV 180
Query: 380 DFAPPVGYTEPEKVKEKEEDNMIDPVDL-------MPEPSGFVAFHGTGNRLDGKRKK 430
+FAPP GY EPE+ K M + + + E +GF AF G G L+G+R K
Sbjct: 181 EFAPPKGYVEPERPAPKPVPTMASKLGIDTGKQETVAEAAGFEAFKGVGQALNGRRTK 238
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 5 IPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+PRP F+ ++ +SV+M ER +V GGKIIMPPSAL LTRL+I P +F+L N
Sbjct: 1 MPRPPARAFDEYFRAYSVAMLNQKERANVSYGGKIIMPPSALASLTRLDIEAPWMFQLRN 60
Query: 61 -QKMGRITHSGVLEFVADEGKVYLPYWCF 88
THSGVLEF+ADEG VYLPYW
Sbjct: 61 PSNSAATTHSGVLEFIADEGCVYLPYWMM 89
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGV 143
+ +SV+M ER +V GGKIIMPPSAL LTRL+I P +F+L N THSGV
Sbjct: 13 FRAYSVAMLNQKERANVSYGGKIIMPPSALASLTRLDIEAPWMFQLRNPSNSAATTHSGV 72
Query: 144 LEL 146
LE
Sbjct: 73 LEF 75
>gi|169611855|ref|XP_001799345.1| hypothetical protein SNOG_09042 [Phaeosphaeria nodorum SN15]
gi|160702380|gb|EAT83234.2| hypothetical protein SNOG_09042 [Phaeosphaeria nodorum SN15]
Length = 352
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 142/199 (71%), Gaps = 12/199 (6%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 265
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 13 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 72
Query: 266 RITHSGVLEFVADEGKVYLPYW--------MMRNLLLDEGELVNIESVSLPVATFSKFQP 317
+ TH+GVLEF+A+EGK+YLPYW +M+ L L+ G+L+ ++S +LP+ TF K QP
Sbjct: 73 KTTHAGVLEFIAEEGKIYLPYWPPSTDASQLMQTLKLEPGDLLQVKSTNLPLGTFIKLQP 132
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIE 374
Q FL+I++PKAVLEN RNF+CLT GD+ YN ++ + VLETKP A+ +E
Sbjct: 133 QDPSFLEISDPKAVLENAFRNFSCLTQGDIFTFAYNDDVFSIAVLETKPEHASKAICTLE 192
Query: 375 CDMNVDFAPPVGYTEPEKV 393
D++VDFAPP+GY EP++
Sbjct: 193 TDLSVDFAPPIGYQEPQRT 211
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-G 64
PR F+ ++C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G
Sbjct: 13 PRRFDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDG 72
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
+ TH+GVLEF+A+EGK+YLPYW
Sbjct: 73 KTTHAGVLEFIAEEGKIYLPYW 94
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
+ C+ + M PG ERE+ GGK+ +PPSAL++LTRL+I YPMLF+L N K G+ TH+GV
Sbjct: 20 FRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKTTHAGV 79
Query: 144 LELDGKRKK 152
LE + K
Sbjct: 80 LEFIAEEGK 88
>gi|145350179|ref|XP_001419494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579726|gb|ABO97787.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 355
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 154/245 (62%), Gaps = 30/245 (12%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRIT 268
FN SY+ + VS +R +E G K+I+PPSALE+LTR+ I YPMLF++TN K G+ T
Sbjct: 12 FNASYRAYPVSFI---DRPQLELGDKVILPPSALERLTRMQIDDYPMLFEVTNAKEGKST 68
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEFVADEG VYLPYWMM+NLLL EG++V +LP T+ K QPQT DFLDI+NP
Sbjct: 69 HCGVLEFVADEGVVYLPYWMMQNLLLGEGDIVKFSYSTLPKGTYVKLQPQTQDFLDISNP 128
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLE LR + CLT GD I+YN+K Y + V+E KPG+A+ +++ D VDFAPP+ Y
Sbjct: 129 KAVLETTLRQYTCLTVGDTFVIHYNNKQYHIDVIEAKPGDAIGVVDTDCEVDFAPPLDYV 188
Query: 389 EPEK-VKEKEEDNMIDPVDL-----------------------MPEP--SGFVAFHGTGN 422
+P K ED ++ P+P + F+AF G G+
Sbjct: 189 DPYGPDTTKFEDTNSGAINAPKTADKADAGASGDAATNGETLAAPQPVVNTFLAFAGGGH 248
Query: 423 RLDGK 427
RLDGK
Sbjct: 249 RLDGK 253
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRIT 67
FN SY+ + VS +R +E G K+I+PPSALE+LTR+ I YPMLF++TN K G+ T
Sbjct: 12 FNASYRAYPVSFI---DRPQLELGDKVILPPSALERLTRMQIDDYPMLFEVTNAKEGKST 68
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG VYLPYW
Sbjct: 69 HCGVLEFVADEGVVYLPYW 87
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 74 FVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNI-CYPMLFKLTN 132
F + + Y + VS +R +E G K+I+PPSALE+LTR+ I YPMLF++TN
Sbjct: 5 FGVGQARFNASYRAYPVSFI---DRPQLELGDKVILPPSALERLTRMQIDDYPMLFEVTN 61
Query: 133 QKMGRITHSGVLEL 146
K G+ TH GVLE
Sbjct: 62 AKEGKSTHCGVLEF 75
>gi|308807517|ref|XP_003081069.1| Ubiquitin fusion-degradation protein (IC) [Ostreococcus tauri]
gi|116059531|emb|CAL55238.1| Ubiquitin fusion-degradation protein (IC) [Ostreococcus tauri]
Length = 354
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 151/245 (61%), Gaps = 27/245 (11%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMG 265
PR F SY+ + VS +R VE G K IMPPSALE+LTR+ I +PM F++ N K G
Sbjct: 8 PRGFTASYRVYPVSFI---DRPQVELGDKAIMPPSALERLTRMQIDEFPMTFEVENAKRG 64
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R TH GVLEFVADEG VYLPYWMM+NLLL+EG++V S P T+ K QPQT DFLDI
Sbjct: 65 RKTHCGVLEFVADEGVVYLPYWMMQNLLLEEGDVVKFTYASPPKGTYVKLQPQTKDFLDI 124
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
+NPKAVLE LRN+ CLT GD I+YN+K Y + V+E KPG+A+ +++ D VDFAPP+
Sbjct: 125 SNPKAVLEMTLRNYTCLTVGDTFVIHYNNKKYYMDVVEAKPGDAIGVVDTDCEVDFAPPL 184
Query: 386 GYTEPE---------------KVKEKEEDNMIDP--------VDLMPEPSGFVAFHGTGN 422
Y +P +KEE D + P+ F+AF G G
Sbjct: 185 DYVDPYGPDNTKFEDTNSGAINAPKKEEVAGDDAGASTSGAETSVEPKTKTFLAFAGGGR 244
Query: 423 RLDGK 427
RLDGK
Sbjct: 245 RLDGK 249
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMG 64
PR F SY+ + VS +R VE G K IMPPSALE+LTR+ I +PM F++ N K G
Sbjct: 8 PRGFTASYRVYPVSFI---DRPQVELGDKAIMPPSALERLTRMQIDEFPMTFEVENAKRG 64
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
R TH GVLEFVADEG VYLPYW
Sbjct: 65 RKTHCGVLEFVADEGVVYLPYW 86
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRITHSGV 143
Y + VS +R VE G K IMPPSALE+LTR+ I +PM F++ N K GR TH GV
Sbjct: 15 YRVYPVSFI---DRPQVELGDKAIMPPSALERLTRMQIDEFPMTFEVENAKRGRKTHCGV 71
Query: 144 LEL 146
LE
Sbjct: 72 LEF 74
>gi|453083566|gb|EMF11611.1| UFD1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 367
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F+ Y+C+ ++M PG ERE GGKI +P SAL++LT+L+I YPMLF+L N
Sbjct: 25 PRKFDEYYRCYPIAMMPGPERESANHGGKIFLPASALDKLTQLHIEYPMLFELINGTKST 84
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+H+GVLEF A+EG+ YLP+WMM+ L L+ G+L+ +S SLP F K QPQT +FLDI+
Sbjct: 85 SSHAGVLEFTAEEGRCYLPFWMMQTLALEPGDLIQTKSTSLPPGRFIKLQPQTTNFLDIS 144
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAP 383
+PKAVLE R FAC++ GD+ +YN +YE+ VLE KP +A+++ E D+ VDFAP
Sbjct: 145 DPKAVLEQAFRGFACMSKGDIFTFSYNDTVYEIAVLEVKPEGEKSAISVQETDLEVDFAP 204
Query: 384 PVGYTEPEK 392
P+GY EP++
Sbjct: 205 PIGYEEPKR 213
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ Y+C+ ++M PG ERE GGKI +P SAL++LT+L+I YPMLF+L N
Sbjct: 25 PRKFDEYYRCYPIAMMPGPERESANHGGKIFLPASALDKLTQLHIEYPMLFELINGTKST 84
Query: 66 ITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+H+GVLEF A+EG+ YLP+W ++++ PG+
Sbjct: 85 SSHAGVLEFTAEEGRCYLPFWMMQTLALEPGD 116
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ ++M PG ERE GGKI +P SAL++LT+L+I YPMLF+L N +H+GVL
Sbjct: 32 YRCYPIAMMPGPERESANHGGKIFLPASALDKLTQLHIEYPMLFELINGTKSTSSHAGVL 91
Query: 145 EL 146
E
Sbjct: 92 EF 93
>gi|302652396|ref|XP_003018049.1| hypothetical protein TRV_07937 [Trichophyton verrucosum HKI 0517]
gi|291181652|gb|EFE37404.1| hypothetical protein TRV_07937 [Trichophyton verrucosum HKI 0517]
Length = 362
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 155/266 (58%), Gaps = 46/266 (17%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 10 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 69
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EGK+YLP+W I+S LP + K Q Q+ FLDI++
Sbjct: 70 THAGVLEFIAEEGKIYLPFW--------------IKSTDLPPGSKIKLQAQSTSFLDISD 115
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
PKAVLEN RNF+CLT GD+ +YN +IYE+ VLETKP NA++++E D+ VDFAPP
Sbjct: 116 PKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLEVDFAPP 175
Query: 385 VGYTEPEKVKEKE-----------EDNMIDPVDLMPEPSGFVA----------------- 416
VGY EP+++ + M + + A
Sbjct: 176 VGYEEPKRLSGTSTPASGVAGSLPAGGTLHSHGTMAQSINYAAIAPGSNDAARAANAASS 235
Query: 417 -FHGTGNRLDGKRKKKDTVETGGTPT 441
FHG+G RL+ K+ K + TP
Sbjct: 236 NFHGSGQRLNMKKGSKSSTPKSATPA 261
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 72/91 (79%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++
Sbjct: 10 RRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQM 69
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMFPGNE 97
TH+GVLEF+A+EGK+YLP+W S + PG++
Sbjct: 70 THAGVLEFIAEEGKIYLPFWIKSTDLPPGSK 100
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ERE+V GGK+IMPPSAL++LTRL+I YPMLF+L N ++TH+GVL
Sbjct: 16 YRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKQQMTHAGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|402591462|gb|EJW85391.1| ubiquitin fusion degradation protein UFD1 containing protein,
partial [Wuchereria bancrofti]
Length = 276
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 148/237 (62%), Gaps = 10/237 (4%)
Query: 236 IIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHSGVLEFVADEGKVYLPYWMMRNLLL 294
I++PPSAL+ L RLNI YPM+FK+ N + TH GVLEF+A+EG+ YLP WMMR L L
Sbjct: 1 ILLPPSALDLLVRLNIEYPMMFKVQNLTDAKCFTHCGVLEFLAEEGRCYLPSWMMRQLHL 60
Query: 295 DEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNS 354
+EGE V I +LP AT++K +PQ+ DFL I+NP+AVLE LR FACLT GD+IA+ YN
Sbjct: 61 NEGECVRITYATLPKATYTKLKPQSTDFLAISNPRAVLEVELRKFACLTKGDIIAVEYND 120
Query: 355 KIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEP--- 411
+I E V+E +P AV+IIECDMNV+F P GY EP N P+ P
Sbjct: 121 QILEFLVMEVEPERAVSIIECDMNVEFDAPEGYVEP-NTNAASSSNAAPPMSSAPAADET 179
Query: 412 -----SGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
SGF AF G G+RLDGK K T T +R + + + +Y P L F+R
Sbjct: 180 GIKGGSGFKAFTGAGHRLDGKSKSSTTSLTEMEAAERSLPQLVVNTNYTPGKLEFVR 236
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 35 IIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHSGVLEFVADEGKVYLPYW 86
I++PPSAL+ L RLNI YPM+FK+ N + TH GVLEF+A+EG+ YLP W
Sbjct: 1 ILLPPSALDLLVRLNIEYPMMFKVQNLTDAKCFTHCGVLEFLAEEGRCYLPSW 53
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 107 IIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHSGVLEL 146
I++PPSAL+ L RLNI YPM+FK+ N + TH GVLE
Sbjct: 1 ILLPPSALDLLVRLNIEYPMMFKVQNLTDAKCFTHCGVLEF 41
>gi|378728391|gb|EHY54850.1| hypothetical protein HMPREF1120_03012 [Exophiala dermatitidis
NIH/UT8656]
Length = 388
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ V M G +R+ V GGK+ +PPSAL++LT+L+I YPM+F+L N G+
Sbjct: 26 RRFDEYYRCYPVVMMNGPDRKSVNYGGKVFLPPSALDKLTKLHIAYPMVFELVNGNAGKK 85
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEF+A+EG++YLP W+MR L LD G+LV I+S LP F K QPQ+ FLDI++
Sbjct: 86 THAGVLEFIAEEGRIYLPQWLMRTLELDPGDLVQIKSTDLPPGKFIKLQPQSPAFLDISD 145
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPP 384
P+AVLEN RNF+CLT GD+ YN + Y++ VLE +P +A+ +E D+ VDFAPP
Sbjct: 146 PRAVLENAFRNFSCLTKGDVFTFEYNDQTYDIAVLEIRPDTESHAIVTMETDLEVDFAPP 205
Query: 385 VGYTEPEKV 393
VGY PE+
Sbjct: 206 VGYVPPERT 214
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ V M G +R+ V GGK+ +PPSAL++LT+L+I YPM+F+L N G+
Sbjct: 26 RRFDEYYRCYPVVMMNGPDRKSVNYGGKVFLPPSALDKLTKLHIAYPMVFELVNGNAGKK 85
Query: 67 THSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
TH+GVLEF+A+EG++YLP W ++ + PG+
Sbjct: 86 THAGVLEFIAEEGRIYLPQWLMRTLELDPGD 116
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M G +R+ V GGK+ +PPSAL++LT+L+I YPM+F+L N G+ TH+GVL
Sbjct: 32 YRCYPVVMMNGPDRKSVNYGGKVFLPPSALDKLTKLHIAYPMVFELVNGNAGKKTHAGVL 91
Query: 145 EL 146
E
Sbjct: 92 EF 93
>gi|356508175|ref|XP_003522835.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 300
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 145/217 (66%), Gaps = 11/217 (5%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++++C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H
Sbjct: 14 FEQTFRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSH 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+ADEG +Y+PYWMM+NLLL EG++V ++ VSLP T+ K QP T DF DI+NPK
Sbjct: 71 CGVLEFIADEGTIYMPYWMMQNLLLQEGDIVRVKFVSLPKGTYVKLQPHTKDFFDISNPK 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR F+CLT+GD I + YN+K Y L V+ETKP NA++IIE D VDFAP + Y
Sbjct: 131 AILETTLRKFSCLTTGDTIMMTYNNKKYYLDVIETKPANAISIIETDCEVDFAPSLDYKV 190
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDG 426
K ++ ++ F F GTG RLDG
Sbjct: 191 TTASKTLDKAIFLE--------GKFNPFFGTGRRLDG 219
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++++C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H
Sbjct: 14 FEQTFRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSH 70
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+ADEG +Y+PYW
Sbjct: 71 CGVLEFIADEGTIYMPYW 88
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H GVL
Sbjct: 18 FRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSHCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|449300954|gb|EMC96965.1| hypothetical protein BAUCODRAFT_32710 [Baudoinia compniacensis UAMH
10762]
Length = 373
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 163/297 (54%), Gaps = 40/297 (13%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F+ Y+C+ V+M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N +
Sbjct: 26 PRRFDEYYRCYPVAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELNNGIKSK 85
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
TH+GVLEF A+EG+ YLPYW+M+ LLL+ G+L+ +S LP F K QPQ +FL+I+
Sbjct: 86 STHAGVLEFTAEEGRCYLPYWLMQTLLLEPGDLLQTKSTDLPPGQFIKLQPQNVNFLEIS 145
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAP 383
+PKAVLE RNF+CLT GD+ +YN +E+ VLE KP A+++ E D+ VDFA
Sbjct: 146 DPKAVLETAFRNFSCLTVGDIFTFSYNDTTFEIAVLEVKPEGEKKAISVQETDLEVDFAA 205
Query: 384 PVGYTEPEKVKE-------------------KEEDNMIDPVD---LMPEPS--------G 413
PVGY EP E M ++ + P S
Sbjct: 206 PVGYQEPTAKTSGTSTPRSIGSTMASKGGLMHAEGTMAQAINYSAIAPSSSTAAVGHAQA 265
Query: 414 FVAFHGTGNRLDGKRKKKDT------VETGGTPTKREYQRGIPHYDYEPNTLVFLRN 464
AF G+GNRL ++ K T T GTP K + +P P T+ RN
Sbjct: 266 SSAFSGSGNRLAARKGKAGTSVSTPASSTPGTP-KPDQSASVPTTAALPKTVSKNRN 321
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ Y+C+ V+M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N +
Sbjct: 26 PRRFDEYYRCYPVAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELNNGIKSK 85
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 124
TH+GVLEF A+EG+ YLPYW + E D+ + +PP +L N+ +
Sbjct: 86 STHAGVLEFTAEEGRCYLPYWLMQTLLL---EPGDLLQTKSTDLPPGQFIKLQPQNVNF 141
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N + TH+GVL
Sbjct: 33 YRCYPVAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELNNGIKSKSTHAGVL 92
Query: 145 EL 146
E
Sbjct: 93 EF 94
>gi|296422279|ref|XP_002840689.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636910|emb|CAZ84880.1| unnamed protein product [Tuber melanosporum]
Length = 367
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 139/192 (72%), Gaps = 4/192 (2%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ +C+ + M G ER ++ GGK+IMPPSAL++L+RL+I YPMLF+L N ++
Sbjct: 10 RRFDEFLRCYPIVMMSGAERAELNFGGKVIMPPSALDKLSRLHIAYPMLFELRNGSKDKV 69
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFL-DIT 326
TH+GVLEF+A+EG+VYLP+WMM+ LLL+ GEL+ I+S L TF K QPQ+ F+ IT
Sbjct: 70 THAGVLEFIAEEGRVYLPHWMMKTLLLEPGELLQIKSTDLLAGTFIKLQPQSTAFITSIT 129
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAP 383
+PKAVLEN LR F+ LT GD+ + YN +++++ VLE KP A+T IE D++VDFAP
Sbjct: 130 DPKAVLENALRTFSALTVGDVFSFFYNDQVFDIAVLEVKPETKMKAITTIETDISVDFAP 189
Query: 384 PVGYTEPEKVKE 395
PVGY EP + +
Sbjct: 190 PVGYVEPSRAPQ 201
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 16/133 (12%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ +C+ + M G ER ++ GGK+IMPPSAL++L+RL+I YPMLF+L N ++
Sbjct: 10 RRFDEFLRCYPIVMMSGAERAELNFGGKVIMPPSALDKLSRLHIAYPMLFELRNGSKDKV 69
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 126
TH+GVLEF+A+EG+VYLP+W +++ P L Q+ ++
Sbjct: 70 THAGVLEFIAEEGRVYLPHWMMKT----------------LLLEPGELLQIKSTDLLAGT 113
Query: 127 LFKLTNQKMGRIT 139
KL Q IT
Sbjct: 114 FIKLQPQSTAFIT 126
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
C+ + M G ER ++ GGK+IMPPSAL++L+RL+I YPMLF+L N ++TH+GVLE
Sbjct: 18 CYPIVMMSGAERAELNFGGKVIMPPSALDKLSRLHIAYPMLFELRNGSKDKVTHAGVLEF 77
>gi|398393980|ref|XP_003850449.1| hypothetical protein MYCGRDRAFT_74587 [Zymoseptoria tritici IPO323]
gi|339470327|gb|EGP85425.1| hypothetical protein MYCGRDRAFT_74587 [Zymoseptoria tritici IPO323]
Length = 360
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 45/305 (14%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ + M G ERE + GGKI +P SAL++LT+L+I YPM F++TN R
Sbjct: 27 RRFDEYYRCYPIVMMSGPEREALNHGGKIFLPASALDKLTQLHISYPMQFEITNGARERT 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
H+GVLEF A+EG+ Y P+W+M+ L L+ G+L+ I+S LP+ +F K QPQ +FL+I++
Sbjct: 87 AHAGVLEFTAEEGRCYFPWWLMQTLHLEAGDLIQIKSTDLPLGSFIKLQPQNTNFLEISD 146
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLE RNF+CLT GD+ +YN +YE+ VLE KP A++++E D+ VDFAPP
Sbjct: 147 PKAVLETAFRNFSCLTLGDVFTFSYNDTVYEIAVLEVKPDTGKKAISVVETDLEVDFAPP 206
Query: 385 VGYTEPEK---------------------VKEKEEDNMIDPVDLMPEPSGFVA--FHGTG 421
VGY EP+K + I+ + P + F G G
Sbjct: 207 VGYEEPKKNSGTSTPRSIASTMASKGGVLHSDGTMAAAINYSSIAPSVTAAATSNFSGGG 266
Query: 422 NRLDGKRKK----------KDTVETGGT--------PTKREYQRGIPH-YDYEPNTLVFL 462
NRL K+ K T TGG+ P K +R P PN L F
Sbjct: 267 NRLVAKKGKAASTATPTPGASTPTTGGSAVSIPGLGPAKSSKRRTGPQPLRLPPNKLFFG 326
Query: 463 RNIKP 467
IKP
Sbjct: 327 YEIKP 331
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ + M G ERE + GGKI +P SAL++LT+L+I YPM F++TN R
Sbjct: 27 RRFDEYYRCYPIVMMSGPEREALNHGGKIFLPASALDKLTQLHISYPMQFEITNGARERT 86
Query: 67 THSGVLEFVADEGKVYLPYW 86
H+GVLEF A+EG+ Y P+W
Sbjct: 87 AHAGVLEFTAEEGRCYFPWW 106
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M G ERE + GGKI +P SAL++LT+L+I YPM F++TN R H+GVL
Sbjct: 33 YRCYPIVMMSGPEREALNHGGKIFLPASALDKLTQLHISYPMQFEITNGARERTAHAGVL 92
Query: 145 EL 146
E
Sbjct: 93 EF 94
>gi|50304703|ref|XP_452307.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641440|emb|CAH01158.1| KLLA0C02475p [Kluyveromyces lactis]
Length = 345
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 156/248 (62%), Gaps = 18/248 (7%)
Query: 201 NMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
N + +IP+ ++C+ ++M N R +D GGKI +PPSAL +LT LN+ YPMLF+L
Sbjct: 10 NAYANIPQRLEEFFRCYPIAMMNDNIRKDDANYGGKIFLPPSALNKLTLLNVRYPMLFEL 69
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
+Q+ G++TH GVLEF+A+EG+VYLP WMM L + G ++ I S +P+ F K +PQ+
Sbjct: 70 KSQESGKVTHGGVLEFIAEEGRVYLPQWMMETLEIQPGSVLQICSTDVPLGQFVKLEPQS 129
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECD 376
DFLDI++PKAVLE LRNF+ LT D+I I+YN+K+Y + +LE KP ++ +IE D
Sbjct: 130 VDFLDISDPKAVLERVLRNFSTLTIDDIIEISYNNKVYRIRILEVKPESSSKSICVIETD 189
Query: 377 MNVDFAPPVGYTEPEKVKEKEEDNMIDP--------------VDLMPEPSGFVAFHGTGN 422
+ DFAPPVGY EP+ +K++ DP +++ +FHG G
Sbjct: 190 LVTDFAPPVGYVEPDYKSQKKQTPSFDPSIKGLGSMSKRINYAEILDPTDKDKSFHGEGQ 249
Query: 423 RLDGKRKK 430
+L GK K
Sbjct: 250 KLSGKAIK 257
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 6/122 (4%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+ +IP+ ++C+ ++M N R +D GGKI +PPSAL +LT LN+ YPMLF+L +
Sbjct: 12 YANIPQRLEEFFRCYPIAMMNDNIRKDDANYGGKIFLPPSALNKLTLLNVRYPMLFELKS 71
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGNERE----DVERGGKIIMPPSALE 115
Q+ G++TH GVLEF+A+EG+VYLP W ++ + PG+ + DV G + + P +++
Sbjct: 72 QESGKVTHGGVLEFIAEEGRVYLPQWMMETLEIQPGSVLQICSTDVPLGQFVKLEPQSVD 131
Query: 116 QL 117
L
Sbjct: 132 FL 133
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M N R +D GGKI +PPSAL +LT LN+ YPMLF+L +Q+ G++TH GV
Sbjct: 23 FRCYPIAMMNDNIRKDDANYGGKIFLPPSALNKLTLLNVRYPMLFELKSQESGKVTHGGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|224080470|ref|XP_002306140.1| predicted protein [Populus trichocarpa]
gi|222849104|gb|EEE86651.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
MPPSAL++L L+I YPMLF+L N R++H GVLEF+A+EG +Y+PYWMM NLLL EG
Sbjct: 1 MPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEG 60
Query: 298 ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIY 357
++V +++V+LP + K QP T DFLDI+NPKA+LE LRN++CLT+GD I + YN+K Y
Sbjct: 61 DIVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKY 120
Query: 358 ELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEK----VKEKEEDNMIDPVDLMPEPSG 413
+ ++ETKP NA++IIE D VDFAPP+ Y EPEK V + + + V EP
Sbjct: 121 YIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVASVPPSKATSQAEEVPAETEPK- 179
Query: 414 FVAFHGTGNRLDGK 427
F F GTG RLDGK
Sbjct: 180 FNPFTGTGRRLDGK 193
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGN 96
MPPSAL++L L+I YPMLF+L N R++H GVLEF+A+EG +Y+PYW +
Sbjct: 1 MPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVLEFIAEEGMIYMPYWMMENLLL--- 57
Query: 97 EREDVERGGKIIMP 110
+ D+ R + +P
Sbjct: 58 QEGDIVRVKNVTLP 71
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 109 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
MPPSAL++L L+I YPMLF+L N R++H GVLE
Sbjct: 1 MPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVLEF 38
>gi|255716080|ref|XP_002554321.1| KLTH0F02530p [Lachancea thermotolerans]
gi|238935704|emb|CAR23884.1| KLTH0F02530p [Lachancea thermotolerans CBS 6340]
Length = 351
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 163/277 (58%), Gaps = 32/277 (11%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
+IP+ F ++C+ +SM N+R +D GGKI +PPSAL +LT LN+ YPMLF+LT
Sbjct: 17 NIPQKFEDFFRCYPISMM--NDRIRKDDANFGGKIFLPPSALNKLTMLNVRYPMLFELTV 74
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
++TH GVLEF+A+EG+VYLP WMM L ++ G L+ I S +P+ F K +PQ+ D
Sbjct: 75 PDTKKVTHGGVLEFIAEEGRVYLPQWMMETLGVNPGSLLQIASTDVPLGQFVKIEPQSVD 134
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMN 378
FLDI++PKAVLEN LR F+ LT D+I INYNSK+Y + VLE KP N++ +IE D+
Sbjct: 135 FLDISDPKAVLENVLRKFSTLTVDDIIEINYNSKLYRIKVLEVKPESSSNSICVIETDLV 194
Query: 379 VDFAPPVGYTEPEKVKE--KEEDNMIDP--------------VDLMPEPSGFVAFHGTGN 422
DFAPPVGY EP+ E K + +DP + S AF GTG
Sbjct: 195 TDFAPPVGYVEPDYRTEHRKSQKPKLDPSAQGLGPMSQRIDYATSVKSTSTTRAFVGTGQ 254
Query: 423 RLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTL 459
L G+ T +RE +R + D EP L
Sbjct: 255 SLSGR--------TANKSEERELERPMISLDNEPAPL 283
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 6/97 (6%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
+IP+ F ++C+ +SM N+R +D GGKI +PPSAL +LT LN+ YPMLF+LT
Sbjct: 17 NIPQKFEDFFRCYPISMM--NDRIRKDDANFGGKIFLPPSALNKLTMLNVRYPMLFELTV 74
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
++TH GVLEF+A+EG+VYLP W ++ + PG+
Sbjct: 75 PDTKKVTHGGVLEFIAEEGRVYLPQWMMETLGVNPGS 111
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ +SM N+R +D GGKI +PPSAL +LT LN+ YPMLF+LT ++TH
Sbjct: 26 FRCYPISMM--NDRIRKDDANFGGKIFLPPSALNKLTMLNVRYPMLFELTVPDTKKVTHG 83
Query: 142 GVLEL 146
GVLE
Sbjct: 84 GVLEF 88
>gi|452841545|gb|EME43482.1| hypothetical protein DOTSEDRAFT_154014 [Dothistroma septosporum
NZE10]
Length = 370
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 134/190 (70%), Gaps = 4/190 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F+ Y+C+ ++M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N G+
Sbjct: 25 PRRFDEYYRCYPIAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELVNGARGK 84
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
TH+GVLEF A+EG+ YLP+W M L L+ G+L+ +S LP F K QPQ +FLDI+
Sbjct: 85 STHAGVLEFTAEEGRCYLPFWTMTVLGLEPGDLLQTKSTDLPPGQFIKLQPQNVNFLDIS 144
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG----NAVTIIECDMNVDFA 382
+PKAVLE RNF+CL+ GD+ +YN +YE+ VLE KP +++++ E D+ VDFA
Sbjct: 145 DPKAVLETAFRNFSCLSLGDVFTFSYNDTVYEIAVLEVKPNIEGKHSISVQETDLEVDFA 204
Query: 383 PPVGYTEPEK 392
PPVGY EP++
Sbjct: 205 PPVGYQEPQR 214
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ Y+C+ ++M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N G+
Sbjct: 25 PRRFDEYYRCYPIAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELVNGARGK 84
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 124
TH+GVLEF A+EG+ YLP+W +V G E D+ + +PP +L N+ +
Sbjct: 85 STHAGVLEFTAEEGRCYLPFWTMTVL---GLEPGDLLQTKSTDLPPGQFIKLQPQNVNF 140
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ ++M PG ER+ GGKI +P SAL++LT+L+I YPMLF+L N G+ TH+GVL
Sbjct: 32 YRCYPIAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELVNGARGKSTHAGVL 91
Query: 145 EL 146
E
Sbjct: 92 EF 93
>gi|440634826|gb|ELR04745.1| hypothetical protein GMDG_06973 [Geomyces destructans 20631-21]
Length = 397
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F+ Y+C+ M G R+ + GGKIIMPPSAL++LTRL+I YPMLF+L N+
Sbjct: 30 RRFDEYYRCYPTVMMSGPSRDYLNYGGKIIMPPSALDKLTRLHITYPMLFELINKPKKAQ 89
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH+GVLEFVA+EGKVYLP WMM L L+ G+L+ I+S +L A K QPQ+ FLDI++
Sbjct: 90 THAGVLEFVAEEGKVYLPQWMMNTLHLEVGDLIQIKSTNLADAKLVKLQPQSPTFLDISD 149
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLEN RNF+ LT GD+ + +YN +Y++ VLE KP + V++IE D+ VDFA P
Sbjct: 150 PKAVLENAFRNFSTLTKGDIFSFHYNDTVYDVAVLEVKPESDKMGVSMIETDVEVDFAAP 209
Query: 385 VGYTEPEKVK 394
VGY EPE+ K
Sbjct: 210 VGYVEPERTK 219
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 60/84 (71%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F+ Y+C+ M G R+ + GGKIIMPPSAL++LTRL+I YPMLF+L N+
Sbjct: 30 RRFDEYYRCYPTVMMSGPSRDYLNYGGKIIMPPSALDKLTRLHITYPMLFELINKPKKAQ 89
Query: 67 THSGVLEFVADEGKVYLPYWCFSV 90
TH+GVLEFVA+EGKVYLP W +
Sbjct: 90 THAGVLEFVAEEGKVYLPQWMMNT 113
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ M G R+ + GGKIIMPPSAL++LTRL+I YPMLF+L N+ TH+GVL
Sbjct: 36 YRCYPTVMMSGPSRDYLNYGGKIIMPPSALDKLTRLHITYPMLFELINKPKKAQTHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|406863163|gb|EKD16211.1| ubiquitin fusion degradation protein Ufd1 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 395
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 137/192 (71%), Gaps = 4/192 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG- 265
P+ F+ Y+C+ M PG ERE++ GGKIIMP SAL++LTRL+I YPMLF+LTN G
Sbjct: 30 PKRFDEYYRCYPTVMLPGPEREELNYGGKIIMPASALDKLTRLHITYPMLFELTNGLKGD 89
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R TH GVLEF+A+EGKVYLP+WMM+ LL++ G+L+ I S L A F K Q Q +FL++
Sbjct: 90 RTTHCGVLEFIAEEGKVYLPHWMMQTLLVETGDLIQIRSTDLAPARFIKVQAQDVNFLEV 149
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFA 382
++PKAVLE RNFA +T GD+ + YN + Y++ VLE KP + AV +IE D+ VDFA
Sbjct: 150 SDPKAVLERAFRNFATMTKGDVFSFKYNDETYDMAVLEVKPESGKGAVCVIETDVEVDFA 209
Query: 383 PPVGYTEPEKVK 394
P+GY EP+ +
Sbjct: 210 APLGYVEPQPTR 221
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG- 64
P+ F+ Y+C+ M PG ERE++ GGKIIMP SAL++LTRL+I YPMLF+LTN G
Sbjct: 30 PKRFDEYYRCYPTVMLPGPEREELNYGGKIIMPASALDKLTRLHITYPMLFELTNGLKGD 89
Query: 65 RITHSGVLEFVADEGKVYLPYWCFSV 90
R TH GVLEF+A+EGKVYLP+W
Sbjct: 90 RTTHCGVLEFIAEEGKVYLPHWMMQT 115
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG-RITHSGV 143
Y C+ M PG ERE++ GGKIIMP SAL++LTRL+I YPMLF+LTN G R TH GV
Sbjct: 37 YRCYPTVMLPGPEREELNYGGKIIMPASALDKLTRLHITYPMLFELTNGLKGDRTTHCGV 96
Query: 144 LEL 146
LE
Sbjct: 97 LEF 99
>gi|294954444|ref|XP_002788171.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239903386|gb|EER19967.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 326
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 148/236 (62%), Gaps = 21/236 (8%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y C+ VS RE++E+G KI++P SAL+QL RLN+ YPMLF+++N K R TH
Sbjct: 36 FDVQYHCYPVSFL---GREELEKGNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTH 92
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG Y+PYWMM+NL+L EG++V +++VSLP K QP T DFL+I NP+
Sbjct: 93 CGVLEFTAEEGFCYIPYWMMQNLVLQEGDIVRVKNVSLPKGRSVKLQPVTKDFLEIHNPR 152
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LEN LRNFA LT+GD IAI YN+K +E+ V+E KP NA++IIE D++V+F P Y E
Sbjct: 153 AILENSLRNFAALTAGDNIAIQYNNKTFEIEVVECKPANAISIIEADVSVEFLAPKDYVE 212
Query: 390 PEKVKEKEED---------NMIDPVDLMPEPSGF---------VAFHGTGNRLDGK 427
P + E+ I D V F G G RLDGK
Sbjct: 213 PSPSASQAEEMPGTSTGAPGTIASSDTQSNAENIESASLAGKTVLFQGKGMRLDGK 268
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y C+ VS RE++E+G KI++P SAL+QL RLN+ YPMLF+++N K R TH
Sbjct: 36 FDVQYHCYPVSFL---GREELEKGNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTH 92
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG Y+PYW
Sbjct: 93 CGVLEFTAEEGFCYIPYW 110
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLT 118
N +MG G + G + Y C+ VS RE++E+G KI++P SAL+QL
Sbjct: 15 VNPQMGGFLQ-GFFGAMGSGGTFDVQYHCYPVSFL---GREELEKGNKILLPQSALDQLA 70
Query: 119 RLNICYPMLFKLTNQKMGRITHSGVLEL 146
RLN+ YPMLF+++N K R TH GVLE
Sbjct: 71 RLNVSYPMLFQISNLKEPRTTHCGVLEF 98
>gi|299117449|emb|CBN73952.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 148/259 (57%), Gaps = 36/259 (13%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F Y C+ VS ++E +E G KI++P SAL+ L R + YPMLF+L+N G
Sbjct: 25 PRGFEEQYHCYPVSF---QDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGN 81
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
TH GVLEF A EG Y+P+WMM+NLLL+ G L+ +++VSLP TF KFQPQ+ DFL+I+
Sbjct: 82 RTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEIS 141
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NP+AVLE +R+F+CLT GD+I + YN + YEL V E KP NAV I+E D+NVDF PVG
Sbjct: 142 NPRAVLETTMRHFSCLTEGDVICLPYNDRNYELAVKELKPSNAVGIVETDLNVDFDAPVG 201
Query: 387 YTEPE------------------------------KVKEKEEDNMIDPVDLMPEPSGFVA 416
Y E + PVD P+ FV
Sbjct: 202 YDESLAASNAAAAAAAAAGTGGAVAGSSSGATGAINIPAPASGKAPKPVDEAPK---FVP 258
Query: 417 FHGTGNRLDGKRKKKDTVE 435
F G G RLDGK+ E
Sbjct: 259 FGGGGARLDGKKTPAKGAE 277
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F Y C+ VS ++E +E G KI++P SAL+ L R + YPMLF+L+N G
Sbjct: 25 PRGFEEQYHCYPVSF---QDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGN 81
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
TH GVLEF A EG Y+P+W
Sbjct: 82 RTHCGVLEFSAPEGSCYIPHW 102
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS ++E +E G KI++P SAL+ L R + YPMLF+L+N G TH GVL
Sbjct: 32 YHCYPVSF---QDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGNRTHCGVL 88
Query: 145 EL 146
E
Sbjct: 89 EF 90
>gi|366990979|ref|XP_003675257.1| hypothetical protein NCAS_0B08020 [Naumovozyma castellii CBS 4309]
gi|342301121|emb|CCC68886.1| hypothetical protein NCAS_0B08020 [Naumovozyma castellii CBS 4309]
Length = 361
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 29/265 (10%)
Query: 197 QFGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPM 255
G F +P+ F ++C+ ++M R +D GGKI +PPSAL +L+ LNI YPM
Sbjct: 8 HLGSQTFAALPQTFEEFFRCYPIAMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPM 67
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LF+LT+ + G++TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K
Sbjct: 68 LFQLTSSENGKVTHGGVLEFIAEEGRVYLPQWMMITLGVQPGSLLKIASTDVPLGQFVKI 127
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTI 372
+PQ+ DFLDI++PKAVLEN LRNF+ LT D+I I YN+KIY + +LE KP ++ +
Sbjct: 128 EPQSVDFLDISDPKAVLENVLRNFSTLTVDDIIEIRYNNKIYGIKILEVKPESQSRSICV 187
Query: 373 IECDMNVDFAPPVGYTEP--EKVKEKEED----------------------NMIDPVDLM 408
IE D+ DFAPPVGY EP E +K +EE+ I+ +++
Sbjct: 188 IETDLVTDFAPPVGYVEPDYEALKAQEEEKKRIQKQNRKFDPSIVSQGSMSTRINYSEIV 247
Query: 409 PEPS-GFVAFHGTGNRLDGKRKKKD 432
S G F G G +L GK KKD
Sbjct: 248 ENASAGDSNFTGQGQKLSGKEIKKD 272
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F +P+ F ++C+ ++M R +D GGKI +PPSAL +L+ LNI YPMLF+LT+
Sbjct: 14 FAALPQTFEEFFRCYPIAMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTS 73
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW-CFSVSMFPGN 96
+ G++TH GVLEF+A+EG+VYLP W ++ + PG+
Sbjct: 74 SENGKVTHGGVLEFIAEEGRVYLPQWMMITLGVQPGS 110
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 64 GRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNI 122
G +H G F A + C+ ++M R +D GGKI +PPSAL +L+ LNI
Sbjct: 4 GFTSHLGSQTFAALPQTFEEFFRCYPIAMMNDRIRKDDANYGGKIFLPPSALNKLSMLNI 63
Query: 123 CYPMLFKLTNQKMGRITHSGVLEL 146
YPMLF+LT+ + G++TH GVLE
Sbjct: 64 RYPMLFQLTSSENGKVTHGGVLEF 87
>gi|402076563|gb|EJT71986.1| ubiquitin fusion degradation protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 373
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 140/192 (72%), Gaps = 3/192 (1%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
I + F+ Y+C+ + M PG+ER ++ G KI +P SAL+++++L++ +P+L +L N +
Sbjct: 13 IAQRFDEYYRCYPMIMAPGSERPELNHGSKIFLPASALDKVSKLHVQWPLLMELINGEND 72
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R THSGVLEFVA+EG+ YLP WMM+ LLLD G+++ I+S SL +A K QPQ+ FLDI
Sbjct: 73 RHTHSGVLEFVAEEGRAYLPQWMMQTLLLDVGDMIQIKSTSLDLARLVKLQPQSTKFLDI 132
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFA 382
++P+AVLE RNFA LT GD+ + YN +YE+ VL+ KP +A V++IE D++VDFA
Sbjct: 133 SDPRAVLEKAFRNFATLTKGDVFSFEYNDDVYEMAVLDVKPESAKMGVSMIETDVSVDFA 192
Query: 383 PPVGYTEPEKVK 394
PPVGY EPE+ K
Sbjct: 193 PPVGYVEPERQK 204
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 61/89 (68%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
I + F+ Y+C+ + M PG+ER ++ G KI +P SAL+++++L++ +P+L +L N +
Sbjct: 13 IAQRFDEYYRCYPMIMAPGSERPELNHGSKIFLPASALDKVSKLHVQWPLLMELINGEND 72
Query: 65 RITHSGVLEFVADEGKVYLPYWCFSVSMF 93
R THSGVLEFVA+EG+ YLP W +
Sbjct: 73 RHTHSGVLEFVAEEGRAYLPQWMMQTLLL 101
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG+ER ++ G KI +P SAL+++++L++ +P+L +L N + R THSGVL
Sbjct: 21 YRCYPMIMAPGSERPELNHGSKIFLPASALDKVSKLHVQWPLLMELINGENDRHTHSGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
>gi|393216917|gb|EJD02407.1| UFD1-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 492
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 141/207 (68%), Gaps = 2/207 (0%)
Query: 190 ASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL 249
A + F GF R ++ K +SV++ PGNER ++ GGKIIMPPSAL LT L
Sbjct: 20 AQLAQGFPGGFGPNRRSARSYDEYMKAYSVALLPGNERTNLSYGGKIIMPPSALANLTNL 79
Query: 250 NICYPMLFKLTN-QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLP 308
++ P +FKL+N TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I LP
Sbjct: 80 DLESPWMFKLSNPANPAASTHAGVLEFIAEEGCVHLPYWMMKTLNLNEGDPIRITGAELP 139
Query: 309 VATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN 368
F K QPQ FL+I++PKAVLE+ LRNF+ LT GD+IAI+YNS +++ V+E++PG
Sbjct: 140 KGQFVKLQPQAVHFLEISDPKAVLEHALRNFSALTQGDIIAISYNSIVFDFLVMESQPGG 199
Query: 369 -AVTIIECDMNVDFAPPVGYTEPEKVK 394
+ II+ D+ VDFAPPVGY EPE+ K
Sbjct: 200 EGINIIDTDLEVDFAPPVGYKEPERPK 226
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 65
R ++ K +SV++ PGNER ++ GGKIIMPPSAL LT L++ P +FKL+N
Sbjct: 38 RSYDEYMKAYSVALLPGNERTNLSYGGKIIMPPSALANLTNLDLESPWMFKLSNPANPAA 97
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+A+EG V+LPYW
Sbjct: 98 STHAGVLEFIAEEGCVHLPYW 118
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV++ PGNER ++ GGKIIMPPSAL LT L++ P +FKL+N TH+GVLE
Sbjct: 46 AYSVALLPGNERTNLSYGGKIIMPPSALANLTNLDLESPWMFKLSNPANPAASTHAGVLE 105
Query: 146 L 146
Sbjct: 106 F 106
>gi|321149977|gb|ADW66136.1| ubiquitin fusion degradation protein 1 [Solanum nigrum]
Length = 292
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 140/215 (65%), Gaps = 5/215 (2%)
Query: 215 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLE 274
+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVLE
Sbjct: 1 RCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERVSHCGVLE 57
Query: 275 FVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLEN 334
F+A+EG VY+PYWMM NL L EG++V +++V+LP + K QP T DFLDI+NPKA+LE
Sbjct: 58 FIAEEGMVYMPYWMMENLCLQEGDIVTVKNVTLPKGKYVKLQPHTKDFLDISNPKAILET 117
Query: 335 CLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKV- 393
LRNF+CLT+GD I + YN+K Y + ++ETKP N ++IIE D VDFAPP+ Y EPE+
Sbjct: 118 TLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNGISIIETDCEVDFAPPLDYKEPERAA 177
Query: 394 -KEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
+ F F G RLDGK
Sbjct: 178 PSRPSKAPAEVEEAATEVEPKFNPFTGGARRLDGK 212
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 14 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLE 73
+C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVLE
Sbjct: 1 RCYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERVSHCGVLE 57
Query: 74 FVADEGKVYLPYW 86
F+A+EG VY+PYW
Sbjct: 58 FIAEEGMVYMPYW 70
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
C+ S ++ +E G KIIMPPSAL++L L+I YPMLF+L N R++H GVLE
Sbjct: 2 CYPASFI---DKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERVSHCGVLEF 58
>gi|159481951|ref|XP_001699038.1| hypothetical protein CHLREDRAFT_106366 [Chlamydomonas reinhardtii]
gi|158273301|gb|EDO99092.1| predicted protein [Chlamydomonas reinhardtii]
Length = 236
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 145/239 (60%), Gaps = 16/239 (6%)
Query: 202 MFPDIPRP---FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK 258
MFP + P F Y+ V+ +++ E G KIIMPPSALE+L L+I YPMLF+
Sbjct: 1 MFPGMGYPGQSFEAVYRAMPVAFI---DKQSAEHGDKIIMPPSALERLASLHIEYPMLFR 57
Query: 259 LTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQ 318
L R TH GVLEF+A+EG VY+P+WMM+NLLL G+ + + SVSLP T+ K QP
Sbjct: 58 LEGVHSKRETHCGVLEFIAEEGVVYMPHWMMQNLLLQVGDTIRVRSVSLPKGTYVKLQPV 117
Query: 319 TCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMN 378
T DFLDITNPKAVLE LR ++CLT GD ++YN+K YE+ V + KPG A+++IE D
Sbjct: 118 TSDFLDITNPKAVLERTLRGYSCLTVGDCFVVHYNNKNYEIEVRDAKPGRAISVIETDCQ 177
Query: 379 VDFAPPVGYTEPEKVKEKEEDNMIDPVDLM----------PEPSGFVAFHGTGNRLDGK 427
VDF P Y EPE+V + PE F+AF GT RLDGK
Sbjct: 178 VDFEAPKDYKEPERVPPAQPKPEPAAAAAGAHQGGGVAPEPEEPKFLAFAGTARRLDGK 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 1 MFPDIPRP---FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK 57
MFP + P F Y+ V+ +++ E G KIIMPPSALE+L L+I YPMLF+
Sbjct: 1 MFPGMGYPGQSFEAVYRAMPVAFI---DKQSAEHGDKIIMPPSALERLASLHIEYPMLFR 57
Query: 58 LTNQKMGRITHSGVLEFVADEGKVYLPYW 86
L R TH GVLEF+A+EG VY+P+W
Sbjct: 58 LEGVHSKRETHCGVLEFIAEEGVVYMPHW 86
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
+++ E G KIIMPPSALE+L L+I YPMLF+L R TH GVLE
Sbjct: 25 DKQSAEHGDKIIMPPSALERLASLHIEYPMLFRLEGVHSKRETHCGVLEF 74
>gi|444314411|ref|XP_004177863.1| hypothetical protein TBLA_0A05510 [Tetrapisispora blattae CBS 6284]
gi|387510902|emb|CCH58344.1| hypothetical protein TBLA_0A05510 [Tetrapisispora blattae CBS 6284]
Length = 354
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 142/208 (68%), Gaps = 8/208 (3%)
Query: 199 GFNMF----PDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICY 253
GFN F +IP+ F ++C+ ++M R +D GGKI +PPSAL +LT LNI Y
Sbjct: 4 GFNTFSTGFANIPQKFESLFRCYPIAMMNDQIRKDDANYGGKIFLPPSALHKLTMLNIRY 63
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLF+LT ++TH GVLEF+A+EG+VYLP WMM L + G L+ + S+ +P+ F
Sbjct: 64 PMLFELTANDSKKVTHGGVLEFIAEEGRVYLPQWMMETLQIQPGSLLKVASIDVPLGNFV 123
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAV 370
K +PQ+ DFLDI++PKAVLEN LR+F+ LT D+I I+YN+KIY + +LE KP N++
Sbjct: 124 KIEPQSVDFLDISDPKAVLENVLRSFSTLTINDIIEISYNNKIYRIKILEVKPESSSNSI 183
Query: 371 TIIECDMNVDFAPPVGYTEPEKVKEKEE 398
+IE D+ DFAPPVGY EP+ KE+
Sbjct: 184 CVIETDLITDFAPPVGYVEPDYKALKEQ 211
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F +IP+ F ++C+ ++M R +D GGKI +PPSAL +LT LNI YPMLF+LT
Sbjct: 12 FANIPQKFESLFRCYPIAMMNDQIRKDDANYGGKIFLPPSALHKLTMLNIRYPMLFELTA 71
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGNERE----DVERGGKIIMPPSALE 115
++TH GVLEF+A+EG+VYLP W ++ + PG+ + DV G + + P +++
Sbjct: 72 NDSKKVTHGGVLEFIAEEGRVYLPQWMMETLQIQPGSLLKVASIDVPLGNFVKIEPQSVD 131
Query: 116 QL 117
L
Sbjct: 132 FL 133
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M R +D GGKI +PPSAL +LT LNI YPMLF+LT ++TH GV
Sbjct: 23 FRCYPIAMMNDQIRKDDANYGGKIFLPPSALHKLTMLNIRYPMLFELTANDSKKVTHGGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|156848135|ref|XP_001646950.1| hypothetical protein Kpol_2000p59 [Vanderwaltozyma polyspora DSM
70294]
gi|156117632|gb|EDO19092.1| hypothetical protein Kpol_2000p59 [Vanderwaltozyma polyspora DSM
70294]
Length = 352
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 153/236 (64%), Gaps = 15/236 (6%)
Query: 201 NMFPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLF 257
N F IP+ F ++C+ +SM N+R +D GGKI +PPSAL +LT LNI YPMLF
Sbjct: 11 NQFASIPQKFESFFRCYPISMM--NDRIRKDDANYGGKIFLPPSALNKLTMLNIRYPMLF 68
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
+L + G+ITH GVLEF+A+EG+ YLP WMM L + G L+ I ++ +P+ ++ +P
Sbjct: 69 ELMANENGKITHGGVLEFIAEEGRTYLPNWMMETLDVKPGSLLKISTIDIPLGSYVNIEP 128
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIE 374
Q+ DFLDI++PKAVLEN LRNF+ LT D+I I+YN+KIY + +LE K P + +IE
Sbjct: 129 QSVDFLDISDPKAVLENVLRNFSTLTINDIIEISYNNKIYRIKILEVKPESPSKGICVIE 188
Query: 375 CDMNVDFAPPVGYTEPEKVKE------KEEDNMIDPVDL-MPEPSGFVAFHGTGNR 423
D+ DFAPPVGY EP+ E K+++ IDP ++ S + +HG N+
Sbjct: 189 TDLITDFAPPVGYVEPDYRSEAAKNEVKKDNAKIDPSNISQGSMSKRIDYHGIVNK 244
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 6/99 (6%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
F IP+ F ++C+ +SM N+R +D GGKI +PPSAL +LT LNI YPMLF+L
Sbjct: 13 FASIPQKFESFFRCYPISMM--NDRIRKDDANYGGKIFLPPSALNKLTMLNIRYPMLFEL 70
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+ G+ITH GVLEF+A+EG+ YLP W ++ + PG+
Sbjct: 71 MANENGKITHGGVLEFIAEEGRTYLPNWMMETLDVKPGS 109
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ +SM N+R +D GGKI +PPSAL +LT LNI YPMLF+L + G+ITH
Sbjct: 24 FRCYPISMM--NDRIRKDDANYGGKIFLPPSALNKLTMLNIRYPMLFELMANENGKITHG 81
Query: 142 GVLEL 146
GVLE
Sbjct: 82 GVLEF 86
>gi|50291255|ref|XP_448060.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527371|emb|CAG61011.1| unnamed protein product [Candida glabrata]
Length = 332
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 159/262 (60%), Gaps = 29/262 (11%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNIC 252
F FG IP+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI
Sbjct: 5 FGFGNTGSVPIPQEFEDFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALNRLSMLNIR 62
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATF 312
YPMLF+LT+ + G++TH GVLEF+A+EG+VYLP WMM L G L+ I S +P+ F
Sbjct: 63 YPMLFRLTSNESGKVTHGGVLEFIAEEGRVYLPQWMMETLNAQPGSLMKINSTDVPLGQF 122
Query: 313 SKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA--- 369
K +PQ+ DFLDIT+PKAVLEN LRNF+ LT D+I I+YN+K Y + VLE KP +A
Sbjct: 123 VKIEPQSTDFLDITDPKAVLENVLRNFSTLTIDDIIEISYNNKTYRIKVLEVKPESAAKS 182
Query: 370 VTIIECDMNVDFAPPVGYTEPE-KVKEKEED-----NMIDPVD---------------LM 408
+ +IE D+ DFAPPVGY EP+ K + E+D IDPV L
Sbjct: 183 ICVIETDLVTDFAPPVGYVEPDYKALKAEQDAKRKSAAIDPVKHSQGSMATRINYSNILN 242
Query: 409 PEPSGFVAFHGTGNRLDGKRKK 430
S + F G G ++ GK K
Sbjct: 243 STDSETIRFAGEGQKISGKPNK 264
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 5 IPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
IP+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLF+LT+
Sbjct: 15 IPQEFEDFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALNRLSMLNIRYPMLFRLTSN 72
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
+ G++TH GVLEF+A+EG+VYLP W
Sbjct: 73 ESGKVTHGGVLEFIAEEGRVYLPQW 97
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLF+LT+ + G++TH
Sbjct: 23 FRCYPIAMM--NDRIRKDDANFGGKIFLPPSALNRLSMLNIRYPMLFRLTSNESGKVTHG 80
Query: 142 GVLEL 146
GVLE
Sbjct: 81 GVLEF 85
>gi|302828168|ref|XP_002945651.1| hypothetical protein VOLCADRAFT_102621 [Volvox carteri f.
nagariensis]
gi|300268466|gb|EFJ52646.1| hypothetical protein VOLCADRAFT_102621 [Volvox carteri f.
nagariensis]
Length = 361
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 149/249 (59%), Gaps = 24/249 (9%)
Query: 200 FNMFPDIP----RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F FP +P + F Y+ V+ +++ E G KIIMPPSALE+L L+I YPM
Sbjct: 2 FGAFPGLPGFPGQTFEAMYRAMPVAFI---DKQSAEHGDKIIMPPSALERLASLHIEYPM 58
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFK+ + R TH GVLEF+A+EG VY+P+WMM+NLLL G+ + + S SLP T+ K
Sbjct: 59 LFKVEGLQSKRHTHCGVLEFIAEEGVVYMPHWMMQNLLLQVGDTIRVRSASLPKGTYVKL 118
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QP T DFLDITNPKAVLE LR+++CLT GD +NYN+K YE+ V + KPG A+++IE
Sbjct: 119 QPVTSDFLDITNPKAVLERTLRSYSCLTVGDCFVVNYNNKNYEIEVKDAKPGPAISVIET 178
Query: 376 DMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSG-----------------FVAFH 418
D VDF P Y EPE+V K + + + F+AF
Sbjct: 179 DCQVDFEAPKDYKEPERVPPKAPEPAPSAAPVAADGKAGGTATGPAPAPEPEEPKFLAFA 238
Query: 419 GTGNRLDGK 427
GTG RLDGK
Sbjct: 239 GTGRRLDGK 247
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 2 FPDIP----RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK 57
FP +P + F Y+ V+ +++ E G KIIMPPSALE+L L+I YPMLFK
Sbjct: 5 FPGLPGFPGQTFEAMYRAMPVAFI---DKQSAEHGDKIIMPPSALERLASLHIEYPMLFK 61
Query: 58 LTNQKMGRITHSGVLEFVADEGKVYLPYW 86
+ + R TH GVLEF+A+EG VY+P+W
Sbjct: 62 VEGLQSKRHTHCGVLEFIAEEGVVYMPHW 90
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
+++ E G KIIMPPSALE+L L+I YPMLFK+ + R TH GVLE
Sbjct: 29 DKQSAEHGDKIIMPPSALERLASLHIEYPMLFKVEGLQSKRHTHCGVLEF 78
>gi|66357078|ref|XP_625717.1| ubiquitin fusion degradation protein (UFD1); double Psi beta barrel
fold [Cryptosporidium parvum Iowa II]
gi|46226648|gb|EAK87627.1| ubiquitin fusion degradation protein (UFD1); double Psi beta barrel
fold [Cryptosporidium parvum Iowa II]
gi|323509281|dbj|BAJ77533.1| cgd4_1200 [Cryptosporidium parvum]
Length = 322
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 144/224 (64%), Gaps = 11/224 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + TH
Sbjct: 44 FINEYSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPAKNKFTH 100
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
SGVLEFVA+EG Y+PYWMM+NL L EG++ +I + SL T+ KF P + DFLDI+NPK
Sbjct: 101 SGVLEFVAEEGTCYMPYWMMQNLELQEGDITSIMNTSLSKGTYVKFMPLSMDFLDISNPK 160
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LRNFA LT GD+I I+YN+ Y + VLETKP NA++IIE D+ VDFAPP Y
Sbjct: 161 AVLETTLRNFATLTVGDIITIHYNNNSYRINVLETKPNNAISIIETDIQVDFAPPPDYV- 219
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVA------FHGTGNRLDGK 427
E + E M D S + F G RLDGK
Sbjct: 220 -EDYNKSESRTMTDTNLTASVTSEYSMSNTDSIFSGHCERLDGK 262
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + TH
Sbjct: 44 FINEYSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPAKNKFTH 100
Query: 69 SGVLEFVADEGKVYLPYW 86
SGVLEFVA+EG Y+PYW
Sbjct: 101 SGVLEFVAEEGTCYMPYW 118
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + THSGVL
Sbjct: 48 YSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPAKNKFTHSGVL 104
Query: 145 EL 146
E
Sbjct: 105 EF 106
>gi|366999618|ref|XP_003684545.1| hypothetical protein TPHA_0B04420 [Tetrapisispora phaffii CBS 4417]
gi|357522841|emb|CCE62111.1| hypothetical protein TPHA_0B04420 [Tetrapisispora phaffii CBS 4417]
Length = 354
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 157/254 (61%), Gaps = 25/254 (9%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
F ++P+ F ++C+ +SM R +D GKI +PPSAL +LT LNI YPMLF+LT+
Sbjct: 17 FINLPQRFESFFRCYPISMMNDRIRKDDANFWGKIFLPPSALNKLTMLNIRYPMLFELTS 76
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+ G++TH GVLEF A+EG+VYLP WMM L + G L+ I + +P+ ++ +PQ+ D
Sbjct: 77 NETGKVTHGGVLEFTAEEGRVYLPQWMMETLSVKAGSLLTIATTDIPLGSYVNLEPQSTD 136
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECDMN 378
FLDI++PKAVLEN LRNF+ LT D+I I+YN+KIY + +LE KP + + +IE D+
Sbjct: 137 FLDISDPKAVLENSLRNFSTLTKDDIIEISYNNKIYRIKILEVKPESPLHGICVIETDLV 196
Query: 379 VDFAPPVGYTEPE---KVKEKEEDNMIDPVDLMPEPSGFV------------------AF 417
DFAPPVGY EP+ KEKEE ++L + G + +F
Sbjct: 197 TDFAPPVGYVEPDYKAMQKEKEEKMASKVINLSGQTVGSMSRRINYTGIAQEHLNDRKSF 256
Query: 418 HGTGNRLDGKRKKK 431
G G++L GK KK
Sbjct: 257 AGIGSKLSGKATKK 270
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F ++P+ F ++C+ +SM R +D GKI +PPSAL +LT LNI YPMLF+LT+
Sbjct: 17 FINLPQRFESFFRCYPISMMNDRIRKDDANFWGKIFLPPSALNKLTMLNIRYPMLFELTS 76
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
+ G++TH GVLEF A+EG+VYLP W
Sbjct: 77 NETGKVTHGGVLEFTAEEGRVYLPQW 102
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ +SM R +D GKI +PPSAL +LT LNI YPMLF+LT+ + G++TH GV
Sbjct: 28 FRCYPISMMNDRIRKDDANFWGKIFLPPSALNKLTMLNIRYPMLFELTSNETGKVTHGGV 87
Query: 144 LEL 146
LE
Sbjct: 88 LEF 90
>gi|3461847|gb|AAC33233.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
Length = 292
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 144/208 (69%), Gaps = 21/208 (10%)
Query: 235 KIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL 294
+ IMPPSAL++L L+I YPMLF+L+N + + +H GVLEF ADEG VYLPYWMM+N+ L
Sbjct: 10 QFIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYWMMQNMSL 69
Query: 295 DEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNS 354
+EG+++ ++++SL T+ K QP T DFLDI+NPKA+LE LR+++CLT+GD I + YN+
Sbjct: 70 EEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPKAILETTLRSYSCLTTGDTIMVPYNN 129
Query: 355 KIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEK-------------VKEKEEDNM 401
K Y + V+E KP +AV+IIE D VDFAPP+ Y EPEK VKE+EE
Sbjct: 130 KQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKEPEKPQKLTPSNKRPLQVKEEEE--- 186
Query: 402 IDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
P +P+ F F G+G RLDGK +
Sbjct: 187 --PASKVPK---FTPFTGSGKRLDGKAQ 209
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 34 KIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
+ IMPPSAL++L L+I YPMLF+L+N + + +H GVLEF ADEG VYLPYW
Sbjct: 10 QFIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYW 62
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 106 KIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
+ IMPPSAL++L L+I YPMLF+L+N + + +H GVLE
Sbjct: 10 QFIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEF 50
>gi|219115389|ref|XP_002178490.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410225|gb|EEC50155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 385
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 134/189 (70%), Gaps = 7/189 (3%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
FP PR F Y C+SV+ ++ D+E+G KI++PPSA + L RL + YPMLF+LT
Sbjct: 17 FP--PRRFEEQYHCYSVAY---ADKADLEKGDKILLPPSAFDTLARLQVDYPMLFQLTAG 71
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
R TH GVLEF A+EG VY+P+WMM+NLL++E LV I +VSLP ATF K QPQ+ DF
Sbjct: 72 D--RTTHCGVLEFTAEEGCVYIPFWMMQNLLIEEAALVTITNVSLPKATFVKLQPQSVDF 129
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFA 382
L+I+NP+AVLE+ LRNF+C+T+ D+I I YN+K Y + E KP A IIE D NVDF
Sbjct: 130 LEISNPRAVLEHALRNFSCVTAHDIIQIPYNNKNYHFELKEVKPSPAACIIETDCNVDFD 189
Query: 383 PPVGYTEPE 391
PVGY EPE
Sbjct: 190 APVGYKEPE 198
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
FP PR F Y C+SV+ ++ D+E+G KI++PPSA + L RL + YPMLF+LT
Sbjct: 17 FP--PRRFEEQYHCYSVAY---ADKADLEKGDKILLPPSAFDTLARLQVDYPMLFQLTAG 71
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
R TH GVLEF A+EG VY+P+W
Sbjct: 72 D--RTTHCGVLEFTAEEGCVYIPFW 94
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SV+ ++ D+E+G KI++PPSA + L RL + YPMLF+LT R TH GVL
Sbjct: 26 YHCYSVAY---ADKADLEKGDKILLPPSAFDTLARLQVDYPMLFQLTAGD--RTTHCGVL 80
Query: 145 ELDGK 149
E +
Sbjct: 81 EFTAE 85
>gi|330844694|ref|XP_003294252.1| hypothetical protein DICPUDRAFT_51398 [Dictyostelium purpureum]
gi|325075328|gb|EGC29230.1| hypothetical protein DICPUDRAFT_51398 [Dictyostelium purpureum]
Length = 301
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 150/243 (61%), Gaps = 26/243 (10%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
FN+ +K + +S P E+ +E GGKI++PPS+L L+RLNI YPMLF+++N GR +H
Sbjct: 5 FNQKFKAYPISFLP-KEKHSLESGGKILLPPSSLNTLSRLNIQYPMLFEISNPITGRTSH 63
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG YLPYWMM+NL L+E + ++I+S +LP TF K QP+T +FLDI+NPK
Sbjct: 64 CGVLEFTAEEGVCYLPYWMMQNLGLNETDFIDIKSATLPKGTFVKIQPRTSNFLDISNPK 123
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLEN LR FA LT + I I+YN+ Y L V+E KP NA++IIE D++VDFAPP+ E
Sbjct: 124 AVLENSLRKFATLTKDEEIMIDYNNNKYYLKVVEIKPANAISIIEADVSVDFAPPMDAKE 183
Query: 390 PEKVKEKEEDNMIDPV---------DLMP----------------EPSGFVAFHGTGNRL 424
+ + L+P E F AF G+G RL
Sbjct: 184 SQNPTPSSSQPASKGLTFGSGSSAPKLIPGKKKKDDSDSDSDSDSEEPKFKAFGGSGARL 243
Query: 425 DGK 427
DGK
Sbjct: 244 DGK 246
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
FN+ +K + +S P E+ +E GGKI++PPS+L L+RLNI YPMLF+++N GR +H
Sbjct: 5 FNQKFKAYPISFLP-KEKHSLESGGKILLPPSSLNTLSRLNIQYPMLFEISNPITGRTSH 63
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG YLPYW
Sbjct: 64 CGVLEFTAEEGVCYLPYW 81
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 79 GKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 138
G+ + + +S P E+ +E GGKI++PPS+L L+RLNI YPMLF+++N GR
Sbjct: 3 GRFNQKFKAYPISFLP-KEKHSLESGGKILLPPSSLNTLSRLNIQYPMLFEISNPITGRT 61
Query: 139 THSGVLEL 146
+H GVLE
Sbjct: 62 SHCGVLEF 69
>gi|294659350|ref|XP_461717.2| DEHA2G03938p [Debaryomyces hansenii CBS767]
gi|199433895|emb|CAG90169.2| DEHA2G03938p [Debaryomyces hansenii CBS767]
Length = 361
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 153/256 (59%), Gaps = 26/256 (10%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + F + F ++ + V+M P + R +D GGKI +P SAL +LT L+I YPML
Sbjct: 10 FGASQFAPMNSNFEDYFRSYPVAMMPDHIRKDDANYGGKIFLPSSALNKLTMLHIRYPML 69
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F+L+N+ G THSGVLEFVA+EG+ YLP WMM L L G L+ I + LP+ F K +
Sbjct: 70 FELSNEASGVTTHSGVLEFVAEEGRAYLPQWMMSTLQLSPGSLLKISNCDLPLGNFVKIE 129
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTII 373
PQ+ DFLDI++PKAVLEN LRNF+ LT D+I INYN I+ + VLE KP ++ + ++
Sbjct: 130 PQSVDFLDISDPKAVLENVLRNFSTLTVNDIIEINYNDSIFGIKVLEAKPESSSRGICVV 189
Query: 374 ECDMNVDFAPPVGYTEPE--KVKEKEEDNMIDP------------------VDLMPEPS- 412
E D+ DFAPPVGY EPE +K N IDP +L+ E S
Sbjct: 190 ETDLETDFAPPVGYVEPEYKPQAKKPTTNAIDPSSVNRSAGAGTMAKSLNYANLVAESSN 249
Query: 413 -GFVAFHGTGNRLDGK 427
AF G+G L GK
Sbjct: 250 PATKAFQGSGQSLSGK 265
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++ + V+M P + R +D GGKI +P SAL +LT L+I YPMLF+L+N+ G T
Sbjct: 22 FEDYFRSYPVAMMPDHIRKDDANYGGKIFLPSSALNKLTMLHIRYPMLFELSNEASGVTT 81
Query: 68 HSGVLEFVADEGKVYLPYWCFS-VSMFPGN 96
HSGVLEFVA+EG+ YLP W S + + PG+
Sbjct: 82 HSGVLEFVAEEGRAYLPQWMMSTLQLSPGS 111
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ + V+M P + R +D GGKI +P SAL +LT L+I YPMLF+L+N+ G THSGV
Sbjct: 26 FRSYPVAMMPDHIRKDDANYGGKIFLPSSALNKLTMLHIRYPMLFELSNEASGVTTHSGV 85
Query: 144 LEL 146
LE
Sbjct: 86 LEF 88
>gi|336364945|gb|EGN93298.1| hypothetical protein SERLA73DRAFT_12127 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377512|gb|EGO18674.1| hypothetical protein SERLADRAFT_334153 [Serpula lacrymans var.
lacrymans S7.9]
Length = 317
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ + +SV+M PG ERE++ GGKIIMPPSAL LT L++ P +F+L N
Sbjct: 8 PRAYDEYLRAYSVAMLPGRERENLSYGGKIIMPPSALANLTNLDLELPWMFQLRNPSNSA 67
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
+TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I LP K Q Q+ FLDI
Sbjct: 68 ALTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELPKGKLVKLQAQSTHFLDI 127
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPP 384
++PKAVLE LRNF+ LT GD+I I+YNS ++ L V+E P G +++++ D+ VDFAPP
Sbjct: 128 SDPKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMEASPGGGGISVLDTDLEVDFAPP 187
Query: 385 VGYTEPEKVKEKEEDNMIDPVDL 407
VGY EPE+ K M +++
Sbjct: 188 VGYVEPERPKAAPPSTMASKLNI 210
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ + +SV+M PG ERE++ GGKIIMPPSAL LT L++ P +F+L N
Sbjct: 8 PRAYDEYLRAYSVAMLPGRERENLSYGGKIIMPPSALANLTNLDLELPWMFQLRNPSNSA 67
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
+TH+GVLEF+A+EG V+LPYW
Sbjct: 68 ALTHAGVLEFIAEEGVVHLPYWMM 91
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M PG ERE++ GGKIIMPPSAL LT L++ P +F+L N +TH+GVLE
Sbjct: 17 AYSVAMLPGRERENLSYGGKIIMPPSALANLTNLDLELPWMFQLRNPSNSAALTHAGVLE 76
Query: 146 L 146
Sbjct: 77 F 77
>gi|254584702|ref|XP_002497919.1| ZYRO0F16522p [Zygosaccharomyces rouxii]
gi|186703695|emb|CAQ43388.1| Ubiquitin fusion degradation protein 1 [Zygosaccharomyces rouxii]
gi|238940812|emb|CAR28986.1| ZYRO0F16522p [Zygosaccharomyces rouxii]
Length = 351
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 134/195 (68%), Gaps = 8/195 (4%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
F +IP+ F ++C+ V+M N+R +D GGKI +PPSAL +LT LN+ YPMLF+L
Sbjct: 12 FVNIPQKFEEFFRCYPVAMM--NDRIRKDDANFGGKIFLPPSALSKLTMLNVRYPMLFEL 69
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
T + G++TH GVLEF+A+EG+ YLP WMM L + G L+ I S LP+ F K QPQ+
Sbjct: 70 TANENGKVTHGGVLEFIAEEGRAYLPQWMMETLGVQPGSLLKIGSTDLPLGQFVKIQPQS 129
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECD 376
DFLDIT+PKAVLEN LR F+ LT D+I INYN +Y + VLE KP + V +IE D
Sbjct: 130 VDFLDITDPKAVLENVLRKFSTLTVDDIIEINYNDSLYRIKVLEVKPDTSSRGVCVIETD 189
Query: 377 MNVDFAPPVGYTEPE 391
+ DFAPPVGY EP+
Sbjct: 190 LVTDFAPPVGYVEPD 204
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
F +IP+ F ++C+ V+M N+R +D GGKI +PPSAL +LT LN+ YPMLF+L
Sbjct: 12 FVNIPQKFEEFFRCYPVAMM--NDRIRKDDANFGGKIFLPPSALSKLTMLNVRYPMLFEL 69
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
T + G++TH GVLEF+A+EG+ YLP W ++ + PG+
Sbjct: 70 TANENGKVTHGGVLEFIAEEGRAYLPQWMMETLGVQPGS 108
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ V+M N+R +D GGKI +PPSAL +LT LN+ YPMLF+LT + G++TH
Sbjct: 23 FRCYPVAMM--NDRIRKDDANFGGKIFLPPSALSKLTMLNVRYPMLFELTANENGKVTHG 80
Query: 142 GVLEL 146
GVLE
Sbjct: 81 GVLEF 85
>gi|30684115|ref|NP_180471.2| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
gi|330253113|gb|AEC08207.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
Length = 280
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 142/205 (69%), Gaps = 21/205 (10%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
MPPSAL++L L+I YPMLF+L+N + + +H GVLEF ADEG VYLPYWMM+N+ L+EG
Sbjct: 1 MPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYWMMQNMSLEEG 60
Query: 298 ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIY 357
+++ ++++SL T+ K QP T DFLDI+NPKA+LE LR+++CLT+GD I + YN+K Y
Sbjct: 61 DVMQVKNISLVKGTYIKLQPHTQDFLDISNPKAILETTLRSYSCLTTGDTIMVPYNNKQY 120
Query: 358 ELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEK-------------VKEKEEDNMIDP 404
+ V+E KP +AV+IIE D VDFAPP+ Y EPEK VKE+EE P
Sbjct: 121 YINVVEAKPSSAVSIIETDCEVDFAPPLDYKEPEKPQKLTPSNKRPLQVKEEEE-----P 175
Query: 405 VDLMPEPSGFVAFHGTGNRLDGKRK 429
+P+ F F G+G RLDGK +
Sbjct: 176 ASKVPK---FTPFTGSGKRLDGKAQ 197
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
MPPSAL++L L+I YPMLF+L+N + + +H GVLEF ADEG VYLPYW
Sbjct: 1 MPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYW 50
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 109 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
MPPSAL++L L+I YPMLF+L+N + + +H GVLE
Sbjct: 1 MPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEF 38
>gi|389638364|ref|XP_003716815.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae 70-15]
gi|351642634|gb|EHA50496.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae 70-15]
gi|440474647|gb|ELQ43377.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae Y34]
gi|440480486|gb|ELQ61146.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae P131]
Length = 379
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER ++ G KII+PPSALE++++L++ +P+L +L N + + TH
Sbjct: 17 FDEYYRCYPMIMVPGAERPELNHGSKIILPPSALEKVSKLHVQWPLLMELINGENDKHTH 76
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
SGVLEFVA+EG+ YLP WMM+ L LD G+++ I+S SL +A K QPQ+ FLDI++P+
Sbjct: 77 SGVLEFVAEEGRAYLPQWMMQTLQLDVGDMIQIKSTSLELARMVKLQPQSAKFLDISDPR 136
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ + YN +YE+ VL+ KP V++IE D++VDFA PVG
Sbjct: 137 AVLEKAFRNFATLTKGDVFSFEYNDDVYEMAVLDVKPETTKMGVSMIETDVSVDFAAPVG 196
Query: 387 YTEPEK 392
Y EPE+
Sbjct: 197 YVEPER 202
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 59/82 (71%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KII+PPSALE++++L++ +P+L +L N + + TH
Sbjct: 17 FDEYYRCYPMIMVPGAERPELNHGSKIILPPSALEKVSKLHVQWPLLMELINGENDKHTH 76
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
SGVLEFVA+EG+ YLP W
Sbjct: 77 SGVLEFVAEEGRAYLPQWMMQT 98
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KII+PPSALE++++L++ +P+L +L N + + THSGVL
Sbjct: 21 YRCYPMIMVPGAERPELNHGSKIILPPSALEKVSKLHVQWPLLMELINGENDKHTHSGVL 80
Query: 145 EL 146
E
Sbjct: 81 EF 82
>gi|255637988|gb|ACU19310.1| unknown [Glycine max]
Length = 196
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 3/178 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++++C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H
Sbjct: 14 FEQTFRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSH 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+ADEG +Y+PYWMM+NLLL EG++V ++ VSLP T+ K QP T DF DI+NPK
Sbjct: 71 CGVLEFIADEGTIYMPYWMMQNLLLQEGDIVRVKFVSLPKGTYVKLQPHTKDFFDISNPK 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY 387
A+LE LR F+CLT+GD I + YN+K Y L V+ETKP NA++IIE D VDFAP + Y
Sbjct: 131 AILETTLRKFSCLTTGDTIMMTYNNKKYYLDVIETKPANAISIIETDCEVDFAPSLDY 188
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++++C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H
Sbjct: 14 FEQTFRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSH 70
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+ADEG +Y+PYW
Sbjct: 71 CGVLEFIADEGTIYMPYW 88
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
+ C+S S E+ ++E G KIIMPPS L++L L + YPM+F+L N R++H GVL
Sbjct: 18 FRCYSASFI---EKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSHCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|323453038|gb|EGB08910.1| hypothetical protein AURANDRAFT_60034 [Aureococcus anophagefferens]
Length = 321
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 147/238 (61%), Gaps = 22/238 (9%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y CFS + ++ ++E G K+++P SA EQL RL I YPMLF+L + K GR TH
Sbjct: 11 FDEQYHCFSGAF---ADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFELRSAK-GR-TH 65
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A EG Y+P+WMM+NL+L+EG ++++++VSLP ATF KF+PQ+ DFLDI+NP+
Sbjct: 66 CGVLEFTAPEGNCYVPFWMMQNLMLEEGGVLSVKNVSLPKATFVKFKPQSTDFLDISNPR 125
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE R F+CLT GD I + YN K + L V E KP A IIECD VDF PVGYTE
Sbjct: 126 AVLEKQFRTFSCLTVGDQICLPYNDKRFYLEVQEVKPREAACIIECDCEVDFDAPVGYTE 185
Query: 390 PEKVKEKEEDNMIDPVDLMPEP-----------------SGFVAFHGTGNRLDGKRKK 430
P+ + + +P P F +F G G+RLDGK K
Sbjct: 186 PDYASRSRATSEASSMPDLPAPLKALSAAKEAEAKAKAEGNFKSFAGAGSRLDGKDLK 243
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y CFS + ++ ++E G K+++P SA EQL RL I YPMLF+L + K GR TH
Sbjct: 11 FDEQYHCFSGAF---ADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFELRSAK-GR-TH 65
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A EG Y+P+W
Sbjct: 66 CGVLEFTAPEGNCYVPFW 83
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFS + ++ ++E G K+++P SA EQL RL I YPMLF+L + K GR TH GVL
Sbjct: 15 YHCFSGAF---ADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFELRSAK-GR-THCGVL 69
Query: 145 EL 146
E
Sbjct: 70 EF 71
>gi|45199181|ref|NP_986210.1| AFR662Cp [Ashbya gossypii ATCC 10895]
gi|44985321|gb|AAS54034.1| AFR662Cp [Ashbya gossypii ATCC 10895]
gi|374109443|gb|AEY98349.1| FAFR662Cp [Ashbya gossypii FDAG1]
Length = 350
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 156/248 (62%), Gaps = 28/248 (11%)
Query: 206 IPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
+P+ F ++C+ + M N+R ED GGKI +PPSAL +L+ LNI YPMLFKL++Q
Sbjct: 15 MPQKFEDFFRCYPIEMM--NDRIRKEDANYGGKIFLPPSALNKLSMLNIRYPMLFKLSSQ 72
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
+ G++TH GVLEFVA+EG+ YLP WMM L ++ G L+ I S +P F K +PQ+ DF
Sbjct: 73 ETGKVTHGGVLEFVAEEGRAYLPGWMMATLGVNPGSLLRISSTDVPQGQFVKIEPQSVDF 132
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNV 379
LDI++PKAVLEN LR F+ LT D+I I+YN +IY + VLE KP + ++ +IE D+
Sbjct: 133 LDISDPKAVLENVLRKFSTLTVDDIIEISYNKRIYRIRVLEVKPESECKSICVIETDLVT 192
Query: 380 DFAPPVGYTEPE-----KVKEKEEDNMIDP--------------VDLMPEP-SGFVAFHG 419
DFAPPVGY EP+ ++++ N +DP D++ E +F G
Sbjct: 193 DFAPPVGYVEPDYQAANNNTQRKKKNTVDPASVSNGTMSRRIKYADIVKEAEQSATSFAG 252
Query: 420 TGNRLDGK 427
G++L GK
Sbjct: 253 EGHKLSGK 260
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 79/121 (65%), Gaps = 10/121 (8%)
Query: 5 IPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
+P+ F ++C+ + M N+R ED GGKI +PPSAL +L+ LNI YPMLFKL++Q
Sbjct: 15 MPQKFEDFFRCYPIEMM--NDRIRKEDANYGGKIFLPPSALNKLSMLNIRYPMLFKLSSQ 72
Query: 62 KMGRITHSGVLEFVADEGKVYLPYWCFS-VSMFPGN----EREDVERGGKIIMPPSALEQ 116
+ G++TH GVLEFVA+EG+ YLP W + + + PG+ DV +G + + P +++
Sbjct: 73 ETGKVTHGGVLEFVAEEGRAYLPGWMMATLGVNPGSLLRISSTDVPQGQFVKIEPQSVDF 132
Query: 117 L 117
L
Sbjct: 133 L 133
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ + M N+R ED GGKI +PPSAL +L+ LNI YPMLFKL++Q+ G++TH
Sbjct: 23 FRCYPIEMM--NDRIRKEDANYGGKIFLPPSALNKLSMLNIRYPMLFKLSSQETGKVTHG 80
Query: 142 GVLEL 146
GVLE
Sbjct: 81 GVLEF 85
>gi|323304825|gb|EGA58583.1| Ufd1p [Saccharomyces cerevisiae FostersB]
gi|323309020|gb|EGA62249.1| Ufd1p [Saccharomyces cerevisiae FostersO]
Length = 361
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 136/193 (70%), Gaps = 8/193 (4%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+ GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K +PQ+ D
Sbjct: 74 NETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMN 378
FLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP ++ +IE D+
Sbjct: 134 FLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLV 193
Query: 379 VDFAPPVGYTEPE 391
DFAPPVGY EP+
Sbjct: 194 TDFAPPVGYVEPD 206
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 10/122 (8%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALE 115
+ GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +++
Sbjct: 74 NETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 116 QL 117
L
Sbjct: 134 FL 135
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT + GR+TH
Sbjct: 25 FRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHG 82
Query: 142 GVLEL 146
GVLE
Sbjct: 83 GVLEF 87
>gi|357472795|ref|XP_003606682.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507737|gb|AES88879.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 419
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 151/251 (60%), Gaps = 23/251 (9%)
Query: 200 FNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
+N PD F + Y C +S +R +E G KIIMP SAL+ L RLNI YPMLF+L
Sbjct: 115 WNALPD--ETFEQFYSCLPISSL---KRPTLENGDKIIMPSSALDSLARLNIEYPMLFEL 169
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
N R TH GVLEF ADEG V+LP WMM +L L EG +V+++S SL F K QP +
Sbjct: 170 RNTSAERTTHCGVLEFTADEGIVFLPNWMMEDLFLQEGNIVSLKSTSLVKGKFVKLQPHS 229
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNV 379
DFL+I++PKA+LE LR+++CLT+G I I YN K Y + V+ETKP A++IIE D V
Sbjct: 230 KDFLEISDPKAMLETSLRSYSCLTTGRTIMIPYNKKKYYIDVVETKPSPAISIIETDCEV 289
Query: 380 DFAPPVGYTEPEK-----VKEK-----EEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
DFAPP+ Y EPEK + K EE+ LMP F G G RLDGK
Sbjct: 290 DFAPPLDYKEPEKPLPSDLSHKKPLQVEEERAAKAPRLMP-------FSGIGRRLDGKPS 342
Query: 430 KKDTVETGGTP 440
+ +VE TP
Sbjct: 343 TQ-SVEQASTP 352
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y C +S +R +E G KIIMP SAL+ L RLNI YPMLF+L N R TH
Sbjct: 123 FEQFYSCLPISSL---KRPTLENGDKIIMPSSALDSLARLNIEYPMLFELRNTSAERTTH 179
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG V+LP W
Sbjct: 180 CGVLEFTADEGIVFLPNW 197
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C +S +R +E G KIIMP SAL+ L RLNI YPMLF+L N R TH GVL
Sbjct: 127 YSCLPISSL---KRPTLENGDKIIMPSSALDSLARLNIEYPMLFELRNTSAERTTHCGVL 183
Query: 145 EL 146
E
Sbjct: 184 EF 185
>gi|6321485|ref|NP_011562.1| polyubiquitin-binding protein UFD1 [Saccharomyces cerevisiae S288c]
gi|1717964|sp|P53044.1|UFD1_YEAST RecName: Full=Ubiquitin fusion degradation protein 1; Short=UB
fusion protein 1; AltName: Full=Polymerase-interacting
protein 3
gi|790621|gb|AAC49023.1| Ufd1p [Saccharomyces cerevisiae]
gi|1323053|emb|CAA97047.1| UFD1 [Saccharomyces cerevisiae]
gi|1835686|gb|AAB46627.1| Pip3p [Saccharomyces cerevisiae]
gi|51013063|gb|AAT92825.1| YGR048W [Saccharomyces cerevisiae]
gi|71064036|gb|AAZ22463.1| Ufd1p [Saccharomyces cerevisiae]
gi|151943330|gb|EDN61643.1| ubiquitin fusion degradation protein [Saccharomyces cerevisiae
YJM789]
gi|190406927|gb|EDV10194.1| ubiquitin fusion degradation protein 1 [Saccharomyces cerevisiae
RM11-1a]
gi|207345199|gb|EDZ72096.1| YGR048Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269085|gb|EEU04421.1| Ufd1p [Saccharomyces cerevisiae JAY291]
gi|259146552|emb|CAY79809.1| Ufd1p [Saccharomyces cerevisiae EC1118]
gi|285812246|tpg|DAA08146.1| TPA: polyubiquitin-binding protein UFD1 [Saccharomyces cerevisiae
S288c]
gi|323333500|gb|EGA74894.1| Ufd1p [Saccharomyces cerevisiae AWRI796]
gi|323337681|gb|EGA78926.1| Ufd1p [Saccharomyces cerevisiae Vin13]
gi|323348581|gb|EGA82825.1| Ufd1p [Saccharomyces cerevisiae Lalvin QA23]
gi|349578264|dbj|GAA23430.1| K7_Ufd1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765653|gb|EHN07160.1| Ufd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299303|gb|EIW10397.1| Ufd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 361
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 136/193 (70%), Gaps = 8/193 (4%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+ GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K +PQ+ D
Sbjct: 74 NETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMN 378
FLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP ++ +IE D+
Sbjct: 134 FLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLV 193
Query: 379 VDFAPPVGYTEPE 391
DFAPPVGY EP+
Sbjct: 194 TDFAPPVGYVEPD 206
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 10/122 (8%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALE 115
+ GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +++
Sbjct: 74 NETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 116 QL 117
L
Sbjct: 134 FL 135
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT + GR+TH
Sbjct: 25 FRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHG 82
Query: 142 GVLEL 146
GVLE
Sbjct: 83 GVLEF 87
>gi|119623442|gb|EAX03037.1| ubiquitin fusion degradation 1 like (yeast), isoform CRA_a [Homo
sapiens]
Length = 220
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 137/183 (74%), Gaps = 7/183 (3%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+NLLL+EG LV +ESV+L VAT+SKFQPQ+ DFLDITNPKAVLEN LRNFACLT+GD+
Sbjct: 11 MMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDV 70
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE--DNMIDPV 405
IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY EPE+ + EE + D
Sbjct: 71 IAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHS 130
Query: 406 DLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRN 464
E GF AF G+GNRLDGK+K VE +P K + +RGIP+Y+++ + F+RN
Sbjct: 131 GYAGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRN 186
Query: 465 IKP 467
+P
Sbjct: 187 SRP 189
>gi|388518993|gb|AFK47558.1| unknown [Lotus japonicus]
Length = 231
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNDDAERVSH 69
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG +Y+PYWMM N+LL EG++V +++V+LP + K QP T DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLLQEGDIVRVKNVTLPKGKYVKLQPHTKDFLDISNPK 129
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY 387
A+LE LRNF+ LT+GD I + YN+K Y + ++ETKP NA++IIE D VDFAPP+ Y
Sbjct: 130 AILETTLRNFSRLTTGDSIMVAYNNKKYYIDIIETKPANAISIIETDCEVDFAPPLDY 187
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F ++Y+C+ S E+ +E G KIIMPPSAL++L L+I YPMLF+L N R++H
Sbjct: 13 FEQTYRCYPASFI---EKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNDDAERVSH 69
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLT-----RLNIC 123
GVLEF+A+EG +Y+PYW + + D+ R + +P +L L+I
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMENMLL---QEGDIVRVKNVTLPKGKYVKLQPHTKDFLDIS 126
Query: 124 YP-MLFKLTNQKMGRIT--HSGVLELDGKRKKKDTVET 158
P + + T + R+T S ++ + K+ D +ET
Sbjct: 127 NPKAILETTLRNFSRLTTGDSIMVAYNNKKYYIDIIET 164
>gi|336263952|ref|XP_003346755.1| hypothetical protein SMAC_04187 [Sordaria macrospora k-hell]
gi|380091462|emb|CCC10958.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 384
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 138/190 (72%), Gaps = 3/190 (1%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
+PR F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N +G
Sbjct: 16 VPRRFDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSLG 75
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEFVA+EG+ Y+P WMM+ L L+ G+++ I++ SL +A K QPQ+ +FLDI
Sbjct: 76 AHTHAGVLEFVAEEGRAYIPQWMMQTLKLEVGDIIQIKTTSLELAKLVKLQPQSVNFLDI 135
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFA 382
++P+AVLE RNFA LT GD+ YN +IYE+ VL+ KP A V +IE D++VDFA
Sbjct: 136 SDPRAVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFA 195
Query: 383 PPVGYTEPEK 392
PPVGY EP +
Sbjct: 196 PPVGYVEPPR 205
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 62/84 (73%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+PR F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N +G
Sbjct: 16 VPRRFDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSLG 75
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEFVA+EG+ Y+P W
Sbjct: 76 AHTHAGVLEFVAEEGRAYIPQWMM 99
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N +G TH+GVL
Sbjct: 24 YRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSLGAHTHAGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|323355012|gb|EGA86843.1| Ufd1p [Saccharomyces cerevisiae VL3]
Length = 361
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 136/193 (70%), Gaps = 8/193 (4%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
+ GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K +PQ+ D
Sbjct: 74 NEXGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMN 378
FLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP ++ +IE D+
Sbjct: 134 FLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLV 193
Query: 379 VDFAPPVGYTEPE 391
DFAPPVGY EP+
Sbjct: 194 TDFAPPVGYVEPD 206
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 10/122 (8%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT
Sbjct: 16 NMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTA 73
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALE 115
+ GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +++
Sbjct: 74 NEXGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVD 133
Query: 116 QL 117
L
Sbjct: 134 FL 135
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKLT + GR+TH
Sbjct: 25 FRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANEXGRVTHG 82
Query: 142 GVLEL 146
GVLE
Sbjct: 83 GVLEF 87
>gi|171690272|ref|XP_001910061.1| hypothetical protein [Podospora anserina S mat+]
gi|170945084|emb|CAP71195.1| unnamed protein product [Podospora anserina S mat+]
Length = 437
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 146/211 (69%), Gaps = 7/211 (3%)
Query: 186 NIKPASAHKEFQFGFN-MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALE 244
N+ P+S K F +G P + R F+ Y+C+ + M PG ER ++ G KI +PPSAL+
Sbjct: 53 NLGPSS--KMFGYGGGGRAPRVQR-FDEYYRCYPLVMAPGAERPELNYGSKIFLPPSALD 109
Query: 245 QLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIES 304
+++RL++ +P++ +L N G+ TH+GVLEFVA+EG+ Y+P WMM+ L LD G+++ I++
Sbjct: 110 KVSRLHVQWPIMLELINGAEGKHTHAGVLEFVAEEGRAYVPQWMMQTLKLDVGDMIQIKT 169
Query: 305 VSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET 364
SL +A K QPQ+ +FLDI++P+AVLE RNFA LT GD+ YN +IYE+ VLE
Sbjct: 170 TSLELAKLVKLQPQSVNFLDISDPRAVLEKAFRNFATLTKGDVFNFEYNDEIYEMAVLEV 229
Query: 365 KPGN---AVTIIECDMNVDFAPPVGYTEPEK 392
KP V +IE D++VDFAPPVGY EPE+
Sbjct: 230 KPETDKMGVCMIETDVSVDFAPPVGYVEPER 260
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH
Sbjct: 75 FDEYYRCYPLVMAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGAEGKHTH 134
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
+GVLEFVA+EG+ Y+P W
Sbjct: 135 AGVLEFVAEEGRAYVPQWMMQT 156
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVL
Sbjct: 79 YRCYPLVMAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGAEGKHTHAGVL 138
Query: 145 EL 146
E
Sbjct: 139 EF 140
>gi|19113572|ref|NP_596780.1| Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|59800404|sp|O42915.4|UFD1_SCHPO RecName: Full=Ubiquitin fusion degradation protein 1; Short=UB
fusion protein 1
gi|3123677|emb|CAA06721.1| Ufd1 protein [Schizosaccharomyces pombe]
gi|3123696|emb|CAA06722.1| Ufd1 protein [Schizosaccharomyces pombe]
gi|6179676|emb|CAB59876.1| Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)
[Schizosaccharomyces pombe]
Length = 342
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 154/235 (65%), Gaps = 14/235 (5%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
++ + F+ Y+C+ V+M PG ER +V GGK+I+PPSALE+L+RLN+ YPMLF N+
Sbjct: 27 NVNQRFDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAA 86
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
+ TH GVLEF+A+EG+VYLPYWMM L L+ G+LV + + + ++ K QPQ+ +FLD
Sbjct: 87 EKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLD 146
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDF 381
IT+ +AVLEN LRNF+ LT D+ I YN ++Y++ V++ +P ++ V+++E D+ VDF
Sbjct: 147 ITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDF 206
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAF---------HGTGNRLDGK 427
PP+GY E +++ ++ N+ M G+ GTG +L+GK
Sbjct: 207 DPPIGYE--ESLQKNKQQNIAGVQGTMVTKIGYDELVRQGDSNLMKGTGTKLNGK 259
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
++ + F+ Y+C+ V+M PG ER +V GGK+I+PPSALE+L+RLN+ YPMLF N+
Sbjct: 27 NVNQRFDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAA 86
Query: 64 GRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGNE----REDVERGGKIIMPPSALEQL 117
+ TH GVLEF+A+EG+VYLPYW ++S+ PG+ D+ +G + + P ++ L
Sbjct: 87 EKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFL 145
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V+M PG ER +V GGK+I+PPSALE+L+RLN+ YPMLF N+ + TH GVL
Sbjct: 36 YRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAAEKKTHGGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|363747898|ref|XP_003644167.1| hypothetical protein Ecym_1094 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887799|gb|AET37350.1| hypothetical protein Ecym_1094 [Eremothecium cymbalariae
DBVPG#7215]
Length = 349
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 159/262 (60%), Gaps = 25/262 (9%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
F P+ F ++C+ + M NER +D GGKI +PPS+L +L+ LNI YPMLFKL
Sbjct: 12 FASGPQKFEDFFRCYPIGMM--NERIRKDDANYGGKIFLPPSSLNKLSMLNIRYPMLFKL 69
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
++Q+ G++TH GVLEF+A+EG+ YLP WMM L + G L+ I S +P K +PQ+
Sbjct: 70 SSQESGKVTHGGVLEFIAEEGRAYLPGWMMETLGVQPGSLLKIASTDMPQGQVVKIEPQS 129
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG---NAVTIIECD 376
DFLDI++PKAVLEN LR F+ LT D+I I+YN++IY + VLE KP N++ +IE D
Sbjct: 130 VDFLDISDPKAVLENVLRKFSTLTINDIIEISYNNRIYRIKVLEVKPHAPCNSICVIETD 189
Query: 377 MNVDFAPPVGYTEPEKVKEKEE--DNMIDP--------------VDLMPEPSG-FVAFHG 419
+ +FAPPVGY EP+ ++ + +DP DL+ G VAF G
Sbjct: 190 LVTEFAPPVGYVEPDYQAQQSQIKRTKVDPSTQGLGTMSQRINYADLIQNADGKVVAFGG 249
Query: 420 TGNRLDGKRKKKDTVETGGTPT 441
G +L GK +++ E P+
Sbjct: 250 DGQKLSGKAIRENRDEHDVKPS 271
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
F P+ F ++C+ + M NER +D GGKI +PPS+L +L+ LNI YPMLFKL
Sbjct: 12 FASGPQKFEDFFRCYPIGMM--NERIRKDDANYGGKIFLPPSSLNKLSMLNIRYPMLFKL 69
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSA 113
++Q+ G++TH GVLEF+A+EG+ YLP W ++ + PG+ D+ +G + + P +
Sbjct: 70 SSQESGKVTHGGVLEFIAEEGRAYLPGWMMETLGVQPGSLLKIASTDMPQGQVVKIEPQS 129
Query: 114 LEQL 117
++ L
Sbjct: 130 VDFL 133
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ + M NER +D GGKI +PPS+L +L+ LNI YPMLFKL++Q+ G++TH
Sbjct: 23 FRCYPIGMM--NERIRKDDANYGGKIFLPPSSLNKLSMLNIRYPMLFKLSSQESGKVTHG 80
Query: 142 GVLEL 146
GVLE
Sbjct: 81 GVLEF 85
>gi|339241073|ref|XP_003376462.1| ubiquitin fusion degradation protein 1-like protein [Trichinella
spiralis]
gi|316974820|gb|EFV58293.1| ubiquitin fusion degradation protein 1-like protein [Trichinella
spiralis]
Length = 571
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 173/298 (58%), Gaps = 39/298 (13%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGN---ER-EDVERGGKIIMPPSALEQLTRLNICYPMLF 257
+FP RP+N Y+CFSV+M P + ER +++ GGK+++P SAL+ LTRL+I YPMLF
Sbjct: 203 LFPQEIRPYNTRYRCFSVAMCPSSVSIERTRNIDYGGKVLLPHSALDWLTRLHISYPMLF 262
Query: 258 KLTN--QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
K+TN + + R TH GVLEF +EGK Y+P+WMMRNLLL EG+++ IESV LPV T+ K
Sbjct: 263 KITNSNKDVKRSTHCGVLEFHQEEGKCYIPHWMMRNLLLCEGDMIQIESVDLPVGTYVKL 322
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
+PQ F+ + NP +LE LRN+ACLT GDMIAI YN K+ E V E +P +AV+IIEC
Sbjct: 323 KPQDSRFVGLANPSVLLELKLRNYACLTKGDMIAIEYNDKVMEFLVQELRPTDAVSIIEC 382
Query: 376 DMNV-DFAPPVGYTEPEKV-----KEKEEDNMIDPVDLMPEPSGFV-------------- 415
D+NV A V +T+ V +++ + +P F+
Sbjct: 383 DINVRRSAKSVCFTDEYLVDFDVPEDQPKSTSTSAALCLPASFNFIIFYNYKIFTAPSLP 442
Query: 416 ------AFHGTGNRLDGK----RKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLR 463
AF G RLDGK ++ + T +T T Y ++DY N L F R
Sbjct: 443 HVENSTAFPGKAFRLDGKERPHKQLRLTTDTDVTSVSELYDADC-NFDY--NKLRFHR 497
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGN---ER-EDVERGGKIIMPPSALEQLTRLNICYPMLF 56
+FP RP+N Y+CFSV+M P + ER +++ GGK+++P SAL+ LTRL+I YPMLF
Sbjct: 203 LFPQEIRPYNTRYRCFSVAMCPSSVSIERTRNIDYGGKVLLPHSALDWLTRLHISYPMLF 262
Query: 57 KLT--NQKMGRITHSGVLEFVADEGKVYLPYW 86
K+T N+ + R TH GVLEF +EGK Y+P+W
Sbjct: 263 KITNSNKDVKRSTHCGVLEFHQEEGKCYIPHW 294
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 85 YWCFSVSMFPGN---ER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLT--NQKMGRI 138
Y CFSV+M P + ER +++ GGK+++P SAL+ LTRL+I YPMLFK+T N+ + R
Sbjct: 215 YRCFSVAMCPSSVSIERTRNIDYGGKVLLPHSALDWLTRLHISYPMLFKITNSNKDVKRS 274
Query: 139 THSGVLELDGKRKK 152
TH GVLE + K
Sbjct: 275 THCGVLEFHQEEGK 288
>gi|356538998|ref|XP_003537987.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 338
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 147/230 (63%), Gaps = 6/230 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y+CF E+ ++E GGKIIMPPSAL +L L+I YPM+F+L N +TH
Sbjct: 33 FQDVYRCFPACFI---EKSNLENGGKIIMPPSALRRLAYLDIEYPMVFELRNSSAEIVTH 89
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG +++P WMM+N+ L EG V +++ +P AT+ K QP T DFLDI+NPK
Sbjct: 90 CGVLEFTADEGIIHMPEWMMKNMKLQEGNTVILKNTQVPRATYVKLQPHTKDFLDISNPK 149
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
++LE LR+++CLT+GD I I YN+K Y + ++ETKP NA+++IE D VDFA P+ Y E
Sbjct: 150 SILEISLRSYSCLTTGDTIMIPYNNKKYYIDIVETKPSNAISVIETDCEVDFAQPLDYIE 209
Query: 390 PEK-VKEKEEDNMIDPV--DLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
PEK + D V D + + V F G G R+DGK + ET
Sbjct: 210 PEKLLPSASSDKGCTEVHDDSATQTAQIVPFTGFGRRVDGKPCTQSVEET 259
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y+CF E+ ++E GGKIIMPPSAL +L L+I YPM+F+L N +TH
Sbjct: 33 FQDVYRCFPACFI---EKSNLENGGKIIMPPSALRRLAYLDIEYPMVFELRNSSAEIVTH 89
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG +++P W
Sbjct: 90 CGVLEFTADEGIIHMPEW 107
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF E+ ++E GGKIIMPPSAL +L L+I YPM+F+L N +TH GVL
Sbjct: 37 YRCFPACFI---EKSNLENGGKIIMPPSALRRLAYLDIEYPMVFELRNSSAEIVTHCGVL 93
Query: 145 ELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFP 204
E T + G + + E NT++ P + + + Q F
Sbjct: 94 EF--------TADEGIIHMPEWMMKNMKL--QEGNTVILKNTQVPRATYVKLQPHTKDFL 143
Query: 205 DIPRPFN------RSYKCFSVS---MFPGNERE 228
DI P + RSY C + M P N ++
Sbjct: 144 DISNPKSILEISLRSYSCLTTGDTIMIPYNNKK 176
>gi|242059387|ref|XP_002458839.1| hypothetical protein SORBIDRAFT_03g041250 [Sorghum bicolor]
gi|241930814|gb|EES03959.1| hypothetical protein SORBIDRAFT_03g041250 [Sorghum bicolor]
Length = 331
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 152/238 (63%), Gaps = 23/238 (9%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK--LTNQKMG-- 265
F + Y+C+ S F G + +E G K+IMP SAL+ L L+I YPMLF+ L N
Sbjct: 13 FAQIYRCYPPS-FVG--KPHLEGGDKVIMPQSALDCLASLHIEYPMLFEFELHNDAAATQ 69
Query: 266 -RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
R++H GVLEFVA+EG + +PYWMM+N+ L+EG++V++++ +LP T++K QP T DFLD
Sbjct: 70 QRVSHCGVLEFVAEEGMIIMPYWMMQNMRLEEGDIVHVKNAALPKGTYAKLQPHTSDFLD 129
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
I+NPK VLE LRNF+CLT+GD I ++YNSK Y + ++ETKP +AV IIE D VDFAPP
Sbjct: 130 ISNPKVVLEKTLRNFSCLTTGDTIMVSYNSKQYYIDIVETKPASAVCIIETDCEVDFAPP 189
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLMPEPSG------------FVAFHGTGNRLDGKRKK 430
+ Y EP EK + + P +G F F G+G RLDGK K
Sbjct: 190 LDYKEP---AEKPRQSTVLPASNKAPAAGDGNTTAVEDEPKFKPFTGSGKRLDGKASK 244
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK--LTNQKMG-- 64
F + Y+C+ S F G + +E G K+IMP SAL+ L L+I YPMLF+ L N
Sbjct: 13 FAQIYRCYPPS-FVG--KPHLEGGDKVIMPQSALDCLASLHIEYPMLFEFELHNDAAATQ 69
Query: 65 -RITHSGVLEFVADEGKVYLPYW 86
R++H GVLEFVA+EG + +PYW
Sbjct: 70 QRVSHCGVLEFVAEEGMIIMPYW 92
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML--FKLTNQKMG---RIT 139
Y C+ S F G + +E G K+IMP SAL+ L L+I YPML F+L N R++
Sbjct: 17 YRCYPPS-FVG--KPHLEGGDKVIMPQSALDCLASLHIEYPMLFEFELHNDAAATQQRVS 73
Query: 140 HSGVLEL 146
H GVLE
Sbjct: 74 HCGVLEF 80
>gi|357472801|ref|XP_003606685.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507740|gb|AES88882.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 386
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 150/239 (62%), Gaps = 9/239 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y CF VS +R +E G KIIMP SAL++L RLNI YPMLF+L N R TH
Sbjct: 90 FEHVYSCFPVSSL---KRPTLENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTTH 146
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG V+LP WMM +LLL EG +V+++S SL K QP + DFL+I++PK
Sbjct: 147 CGVLEFTADEGIVFLPNWMMEDLLLQEGNIVSLKSTSLVKGKCVKLQPHSKDFLEISDPK 206
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE LR+++CLT+G I I YN+K Y + ++ETKP A++IIE D VDFAPP+ Y E
Sbjct: 207 AMLETSLRSYSCLTTGRTIMIPYNNKKYYIDIVETKPSPAISIIETDCEVDFAPPLDYKE 266
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSG----FVAFHGTGNRLDGKRKKKDTVETGGTPTKRE 444
PEK + + P + EP+ + F G G RLDGK + VE TP ++
Sbjct: 267 PEKPLPSDLSHKESP-QVEEEPAAKVPRLMPFSGIGRRLDGKPSTQ-LVEQASTPVPKK 323
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y CF VS +R +E G KIIMP SAL++L RLNI YPMLF+L N R TH
Sbjct: 90 FEHVYSCFPVSSL---KRPTLENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTTH 146
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG V+LP W
Sbjct: 147 CGVLEFTADEGIVFLPNW 164
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF VS +R +E G KIIMP SAL++L RLNI YPMLF+L N R TH GVL
Sbjct: 94 YSCFPVSSL---KRPTLENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTTHCGVL 150
Query: 145 EL 146
E
Sbjct: 151 EF 152
>gi|336468599|gb|EGO56762.1| hypothetical protein NEUTE1DRAFT_111197 [Neurospora tetrasperma
FGSC 2508]
gi|350289128|gb|EGZ70353.1| UFD1-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 382
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 134/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG+ Y+P WMM+ L LD G+++ I++ SL +A K QPQ+ +FLDI++P+
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQTLKLDVGDMIQIKTTSLELARLVKLQPQSVNFLDISDPR 138
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IYE+ VL+ KP A V +IE D++VDFAPPVG
Sbjct: 139 AVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFAPPVG 198
Query: 387 YTEPEK 392
Y EP +
Sbjct: 199 YVEPSR 204
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
+GVLEFVA+EG+ Y+P W
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQT 100
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH+GVL
Sbjct: 23 YRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTHAGVL 82
Query: 145 EL 146
E
Sbjct: 83 EF 84
>gi|452982562|gb|EME82321.1| hypothetical protein MYCFIDRAFT_197475 [Pseudocercospora fijiensis
CIRAD86]
Length = 365
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 131/189 (69%), Gaps = 5/189 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
PR F+ Y+C+ ++M PG ER GGK+ +P SAL++LT+L+I YPMLF++ + +
Sbjct: 25 PRRFDEYYRCYPIAMMPGPERPAANHGGKMFLPASALDKLTQLHITYPMLFEIGTKD--K 82
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
TH+GVLEF A+EG+VYLPYW+M L L+ G+L+ +S LP F K QPQ +FLDIT
Sbjct: 83 NTHAGVLEFTAEEGRVYLPYWIMTVLGLEPGDLIQCKSTDLPPGNFIKLQPQDVNFLDIT 142
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAP 383
+PKAVLE RNF+CLT GD+ YN+ +YE+ VLE KP A+++ E D+ VDFA
Sbjct: 143 DPKAVLEQAFRNFSCLTQGDVFTFEYNNTVYEIAVLEVKPQGDKKAISVQETDLEVDFAA 202
Query: 384 PVGYTEPEK 392
PVGY EP K
Sbjct: 203 PVGYQEPVK 211
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
PR F+ Y+C+ ++M PG ER GGK+ +P SAL++LT+L+I YPMLF++ + +
Sbjct: 25 PRRFDEYYRCYPIAMMPGPERPAANHGGKMFLPASALDKLTQLHITYPMLFEIGTKD--K 82
Query: 66 ITHSGVLEFVADEGKVYLPYWCFSV-SMFPGN 96
TH+GVLEF A+EG+VYLPYW +V + PG+
Sbjct: 83 NTHAGVLEFTAEEGRVYLPYWIMTVLGLEPGD 114
>gi|320582932|gb|EFW97149.1| ubiquitin fusion degradation protein 1 [Ogataea parapolymorpha
DL-1]
Length = 367
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F+ ++C+ ++M P R +D GGKI +P SAL +LT L+I YPMLF +T++ G+ T
Sbjct: 30 FDDYFRCYPIAMMPDVSRKDDANYGGKIFLPQSALHKLTMLHIRYPMLFTITSESSGKST 89
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEF A+EG+ YLP WM+ + + G LVNI++ LP +F +PQ+ DFLDI++P
Sbjct: 90 HSGVLEFTAEEGRCYLPQWMLDTIAAEPGSLVNIKTADLPQGSFVMLEPQSVDFLDISDP 149
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F LT GD+I ++YN +IY++ +LE KP + + +IE D+ DFAPPV
Sbjct: 150 KAVLENALRKFTTLTVGDIIELDYNDQIYKIKILEVKPESSSHGICVIETDLETDFAPPV 209
Query: 386 GYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGN 422
GY EP+ KEE + + +PS GTG+
Sbjct: 210 GYVEPDYKALKEEQEKKNKTKALSQPS----LKGTGS 242
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 89/146 (60%), Gaps = 10/146 (6%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ ++C+ ++M P R +D GGKI +P SAL +LT L+I YPMLF +T++ G+ T
Sbjct: 30 FDDYFRCYPIAMMPDVSRKDDANYGGKIFLPQSALHKLTMLHIRYPMLFTITSESSGKST 89
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALEQLTRLNI 122
HSGVLEF A+EG+ YLP W +++ PG+ + D+ +G +++ P +++ L+I
Sbjct: 90 HSGVLEFTAEEGRCYLPQWMLDTIAAEPGSLVNIKTADLPQGSFVMLEPQSVD---FLDI 146
Query: 123 CYP-MLFKLTNQKMGRITHSGVLELD 147
P + + +K +T ++ELD
Sbjct: 147 SDPKAVLENALRKFTTLTVGDIIELD 172
>gi|322695594|gb|EFY87399.1| ubiquitin fusion degradation protein Ufd1, putative [Metarhizium
acridum CQMa 102]
Length = 358
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 135/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 12 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 71
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG+ Y+P WMM L +D G+++ I + SL +A K QPQ+ +FL+I++PK
Sbjct: 72 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 131
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IYE+ VL+ KP V++IE D++V+FAPPVG
Sbjct: 132 AVLERAFRNFATLTKGDVFNFEYNDEIYEVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 191
Query: 387 YTEPEK 392
Y EPEK
Sbjct: 192 YVEPEK 197
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 12 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 71
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 72 AGVLEFIAEEGRAYIPQWMM 91
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H+GVL
Sbjct: 16 YRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSHAGVL 75
Query: 145 EL 146
E
Sbjct: 76 EF 77
>gi|85110237|ref|XP_963330.1| hypothetical protein NCU06856 [Neurospora crassa OR74A]
gi|28881203|emb|CAD70384.1| related to ubiquitin fusion degradation protein [Neurospora crassa]
gi|28925006|gb|EAA34094.1| hypothetical protein NCU06856 [Neurospora crassa OR74A]
Length = 382
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 134/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG+ Y+P WMM+ L LD G+++ I++ SL +A K QPQ+ +FLDI++P+
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQTLKLDVGDMIQIKTTSLELARLVKLQPQSVNFLDISDPR 138
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IYE+ VL+ KP A V +IE D++VDFAPPVG
Sbjct: 139 AVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFAPPVG 198
Query: 387 YTEPEK 392
Y EP +
Sbjct: 199 YVEPSR 204
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
+GVLEFVA+EG+ Y+P W
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQT 100
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI++PPSAL++++RL++ +P++ +L N G TH+GVL
Sbjct: 23 YRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTHAGVL 82
Query: 145 EL 146
E
Sbjct: 83 EF 84
>gi|301105176|ref|XP_002901672.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
gi|262100676|gb|EEY58728.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
Length = 840
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 133/195 (68%), Gaps = 4/195 (2%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F FN F D P+ F+ Y+ + VS ++ +E G KI++PPSALE L RL+I YPM
Sbjct: 477 FGVQFN-FGDFPQRFDEHYRVYPVSFC---DKAHLEDGDKILLPPSALETLARLHIEYPM 532
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFK+TN+ + R +H GVLEF A EG Y+PYWMM+NL + EG ++NI++VSLP ATF K
Sbjct: 533 LFKVTNEGVERSSHCGVLEFSAPEGSCYMPYWMMQNLFVKEGGILNIQNVSLPKATFVKL 592
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
+PQ+ DFLDI+NP+AVLE LR F+C+T GD I + YN+K Y L V E KP A IIE
Sbjct: 593 RPQSQDFLDISNPRAVLEGSLRKFSCMTVGDTICLKYNNKNYMLDVREVKPAPAACIIET 652
Query: 376 DMNVDFAPPVGYTEP 390
D VDF PP Y P
Sbjct: 653 DCEVDFEPPADYVPP 667
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F D P+ F+ Y+ + VS ++ +E G KI++PPSALE L RL+I YPMLFK+TN+
Sbjct: 483 FGDFPQRFDEHYRVYPVSFC---DKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNE 539
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
+ R +H GVLEF A EG Y+PYW
Sbjct: 540 GVERSSHCGVLEFSAPEGSCYMPYW 564
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
++ +E G KI++PPSALE L RL+I YPMLFK+TN+ + R +H GVLE
Sbjct: 503 DKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNEGVERSSHCGVLEF 552
>gi|359478623|ref|XP_002280743.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
vinifera]
Length = 339
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 161/261 (61%), Gaps = 12/261 (4%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+G+ D+P F + Y C S + +E G KIIMP SAL+ LT L I +PM
Sbjct: 41 MSYGYFYDDDLPI-FKQIYHCLPASSL---NKPQLEMGDKIIMPASALDLLTNLEISFPM 96
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKL N GR+TH GVLEF A EG ++LP WMM NLLL+EG++V +++VSLP T+ +
Sbjct: 97 LFKLKNPASGRVTHCGVLEFTAKEGTMHLPSWMMENLLLEEGDIVKVKNVSLPAGTYMQL 156
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
QP T +FLDITNP+A+LE LR+F+CLT+GD I I+Y++K + + +++TKP AV II+
Sbjct: 157 QPHTKNFLDITNPRAMLETKLRSFSCLTTGDTIVIDYSNKKFYIDIVDTKPSAAVCIIDT 216
Query: 376 DMNVDFAPPVGYTEPEKVKEKEEDNMIDPVD--LMPEPSGFVAFHGTGNRLDGK----RK 429
D VDFAPP+ Y E ++ K + + + L + F F G+ RLDGK +
Sbjct: 217 DCEVDFAPPLDYEEADEPKPSNLSSKTESRESKLATKLIKFKPFTGSARRLDGKPISESQ 276
Query: 430 KKDTVETGG--TPTKREYQRG 448
+DT T G + + +QR
Sbjct: 277 PEDTDGTNGPTSSSSTTFQRS 297
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y C S + +E G KIIMP SAL+ LT L I +PMLFKL N GR+TH
Sbjct: 54 FKQIYHCLPASSL---NKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTH 110
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQL 117
GVLEF A EG ++LP W + E D+ + + +P QL
Sbjct: 111 CGVLEFTAKEGTMHLPSWMMENLLL---EEGDIVKVKNVSLPAGTYMQL 156
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C S + +E G KIIMP SAL+ LT L I +PMLFKL N GR+TH GVL
Sbjct: 58 YHCLPASSL---NKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTHCGVL 114
Query: 145 ELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIK-PASAHKEFQFGFNMF 203
E K GT + + + E +V ++N+ PA + + Q F
Sbjct: 115 EFTAKE---------GTMHLPSWM--MENLLLEEGDIVKVKNVSLPAGTYMQLQPHTKNF 163
Query: 204 PDIPRPFN------RSYKCFSV 219
DI P RS+ C +
Sbjct: 164 LDITNPRAMLETKLRSFSCLTT 185
>gi|254565829|ref|XP_002490025.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|238029821|emb|CAY67744.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|328350431|emb|CCA36831.1| Ubiquitin fusion degradation protein 1 [Komagataella pastoris CBS
7435]
Length = 351
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 147/234 (62%), Gaps = 21/234 (8%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
RE GGKI +PPS L +LT L+I YPMLF+LTNQ+ GR THSGVLEF+A+EG+ YLP
Sbjct: 36 REVANFGGKIFLPPSTLHKLTMLHISYPMLFELTNQETGRSTHSGVLEFLAEEGRCYLPQ 95
Query: 287 WMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGD 346
WMM L + G L+ I++ LP+ +F K +PQ+ DFL+I++PKAVLEN LRNF LT D
Sbjct: 96 WMMSTLGIQTGGLLKIKNCDLPLGSFVKIEPQSVDFLEISDPKAVLENVLRNFTTLTVDD 155
Query: 347 MIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNM-- 401
++ ++YN+K++ + VLE KP + + +IE D+ DFAPPVGY EP+ KEK++ +
Sbjct: 156 IVEVSYNNKVFGIKVLEVKPESSSHGICVIETDLETDFAPPVGYVEPDYKKEKKQSQVNP 215
Query: 402 ----------------IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGT 439
I+ +L+ E F G+G +L GK K + V T
Sbjct: 216 AATNPGLVGQGSMAKKINYSELLKEKPNTTKFQGSGVKLSGKTIKNEEVAAQDT 269
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 49/65 (75%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 85
RE GGKI +PPS L +LT L+I YPMLF+LTNQ+ GR THSGVLEF+A+EG+ YLP
Sbjct: 36 REVANFGGKIFLPPSTLHKLTMLHISYPMLFELTNQETGRSTHSGVLEFLAEEGRCYLPQ 95
Query: 86 WCFSV 90
W S
Sbjct: 96 WMMST 100
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
RE GGKI +PPS L +LT L+I YPMLF+LTNQ+ GR THSGVLE
Sbjct: 36 REVANFGGKIFLPPSTLHKLTMLHISYPMLFELTNQETGRSTHSGVLEF 84
>gi|255724222|ref|XP_002547040.1| ubiquitin fusion degradation protein 1 [Candida tropicalis
MYA-3404]
gi|240134931|gb|EER34485.1| ubiquitin fusion degradation protein 1 [Candida tropicalis
MYA-3404]
Length = 362
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/251 (46%), Positives = 150/251 (59%), Gaps = 29/251 (11%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ VSM P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ ++T
Sbjct: 21 FEEYFRCYPVSMMPELIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELKNEQNDKLT 80
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEF+A+EG+ YLP WMM L L G L+ I + L + F K +PQ+ DFLDI++P
Sbjct: 81 HSGVLEFIAEEGRTYLPQWMMSTLQLSPGSLIKITNCDLSLGKFVKIEPQSVDFLDISDP 140
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I +NYN IY + VLE KP N + ++E D+ DFAPPV
Sbjct: 141 KAVLENVLRKFSTLTVNDIIEVNYNDTIYGIKVLEVKPDNTSQGICVVETDLETDFAPPV 200
Query: 386 GYTEPE-KVKE-KEEDNMIDP------------------VDLMPEPSGFVAFHGTGNRLD 425
GY EPE K K K E IDP L+ + F G+G +L
Sbjct: 201 GYVEPEYKPKAIKPETTPIDPSKVSRGAGAATMAKSINYAKLVADSGKVEKFTGSGQKLS 260
Query: 426 GKRKKKDTVET 436
GK TVET
Sbjct: 261 GK-----TVET 266
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ VSM P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ ++T
Sbjct: 21 FEEYFRCYPVSMMPELIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELKNEQNDKLT 80
Query: 68 HSGVLEFVADEGKVYLPYWCFS-VSMFPGN 96
HSGVLEF+A+EG+ YLP W S + + PG+
Sbjct: 81 HSGVLEFIAEEGRTYLPQWMMSTLQLSPGS 110
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ VSM P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ ++THSGV
Sbjct: 25 FRCYPVSMMPELIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELKNEQNDKLTHSGV 84
Query: 144 LEL 146
LE
Sbjct: 85 LEF 87
>gi|365983948|ref|XP_003668807.1| hypothetical protein NDAI_0B05310 [Naumovozyma dairenensis CBS 421]
gi|343767574|emb|CCD23564.1| hypothetical protein NDAI_0B05310 [Naumovozyma dairenensis CBS 421]
Length = 361
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 263
++P+ F ++C+ + M R +D GGKI +PPSAL +L+ LNI YPMLF+LT +
Sbjct: 16 NLPQTFEEYFRCYPIVMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTASE 75
Query: 264 MGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFL 323
G++TH GVLEF A+EG+VYLP WMM+ L + G L+ I+S +P+ F K +PQ+ DFL
Sbjct: 76 SGKMTHGGVLEFTAEEGRVYLPQWMMQTLNVQPGSLLKIDSTDVPLGQFVKIEPQSTDFL 135
Query: 324 DITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVD 380
DI++PKAVLEN LRNF+ LT D+I I+YN+KIY + VLE KP ++ +IE D+ D
Sbjct: 136 DISDPKAVLENVLRNFSTLTVDDIIEISYNNKIYGIKVLEVKPESSSRSICVIETDLVTD 195
Query: 381 FAPPVGYTEPE 391
FAPPVGY EP+
Sbjct: 196 FAPPVGYVEPD 206
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 62
++P+ F ++C+ + M R +D GGKI +PPSAL +L+ LNI YPMLF+LT +
Sbjct: 16 NLPQTFEEYFRCYPIVMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTASE 75
Query: 63 MGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALEQL 117
G++TH GVLEF A+EG+VYLP W ++++ PG+ + DV G + + P + + L
Sbjct: 76 SGKMTHGGVLEFTAEEGRVYLPQWMMQTLNVQPGSLLKIDSTDVPLGQFVKIEPQSTDFL 135
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ + M R +D GGKI +PPSAL +L+ LNI YPMLF+LT + G++TH GV
Sbjct: 25 FRCYPIVMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTASESGKMTHGGV 84
Query: 144 LEL 146
LE
Sbjct: 85 LEF 87
>gi|401625649|gb|EJS43647.1| ufd1p [Saccharomyces arboricola H-6]
Length = 363
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 155/246 (63%), Gaps = 20/246 (8%)
Query: 201 NMFPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLF 257
N + ++P+ F ++C+ + M N+R +D GGKI +PPSAL +L+ LNI YPMLF
Sbjct: 12 NSYVNMPQTFEEFFRCYPIVMM--NDRIRKDDANFGGKIFLPPSALSRLSMLNIRYPMLF 69
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQP 317
KL+ + GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K +P
Sbjct: 70 KLSANESGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSADVPLGQFVKLEP 129
Query: 318 QTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIE 374
Q+ DFLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP ++ +IE
Sbjct: 130 QSVDFLDISDPKAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSSKSICVIE 189
Query: 375 CDMNVDFAPPVGYTEPE-KVKEKEED----------NMIDPVDL-MPEPSGFVAFHGTGN 422
D+ DFA PVGY EP+ K + ++D ++DP L S + + GT N
Sbjct: 190 TDLVTDFAAPVGYVEPDYKAAKAQQDKEKKGASGKGQVLDPSVLEQGSMSTRIDYTGTAN 249
Query: 423 RLDGKR 428
+ K+
Sbjct: 250 SIKSKQ 255
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
+ ++P+ F ++C+ + M N+R +D GGKI +PPSAL +L+ LNI YPMLFKL
Sbjct: 14 YVNMPQTFEEFFRCYPIVMM--NDRIRKDDANFGGKIFLPPSALSRLSMLNIRYPMLFKL 71
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSA 113
+ + GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +
Sbjct: 72 SANESGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSADVPLGQFVKLEPQS 131
Query: 114 LEQL 117
++ L
Sbjct: 132 VDFL 135
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ + M N+R +D GGKI +PPSAL +L+ LNI YPMLFKL+ + GR+TH
Sbjct: 25 FRCYPIVMM--NDRIRKDDANFGGKIFLPPSALSRLSMLNIRYPMLFKLSANESGRVTHG 82
Query: 142 GVLEL 146
GVLE
Sbjct: 83 GVLEF 87
>gi|348689580|gb|EGZ29394.1| hypothetical protein PHYSODRAFT_358674 [Phytophthora sojae]
Length = 935
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 3/192 (1%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F FN D P+ F+ Y+ + VS ++ +E G KI++PPSALE L RL+I YPM
Sbjct: 577 FGLQFNFGGDFPQRFDEHYRVYPVSFC---DKAHLEDGDKILLPPSALETLARLHIEYPM 633
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFK+TN+ + R +H GVLEF A EG Y+PYWMM+NL + EG ++NI++VSLP ATF K
Sbjct: 634 LFKVTNEGVERSSHCGVLEFSAPEGSCYMPYWMMQNLFVKEGGILNIQNVSLPKATFVKL 693
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
+PQ+ DFLDI+NP+AVLE LR F+C+T GD I + YN+K Y L V E KP A IIE
Sbjct: 694 RPQSQDFLDISNPRAVLEGSLRKFSCMTIGDTICLKYNNKNYMLDVREVKPTPAACIIET 753
Query: 376 DMNVDFAPPVGY 387
D VDF PP Y
Sbjct: 754 DCEVDFEPPADY 765
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
D P+ F+ Y+ + VS ++ +E G KI++PPSALE L RL+I YPMLFK+TN+ +
Sbjct: 586 DFPQRFDEHYRVYPVSFC---DKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNEGV 642
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R +H GVLEF A EG Y+PYW
Sbjct: 643 ERSSHCGVLEFSAPEGSCYMPYW 665
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ +E G KI++PPSALE L RL+I YPMLFK+TN+ + R +H GVLE
Sbjct: 604 DKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNEGVERSSHCGVLEFSA 655
>gi|426200072|gb|EKV49996.1| hypothetical protein AGABI2DRAFT_115061 [Agaricus bisporus var.
bisporus H97]
Length = 460
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F +G P F+ K +SV+M PG +RE+V GGK+IMPPSAL LT L + P
Sbjct: 23 FPYGPGRTSRNPNSFDEYLKAYSVAMLPGRQRENVSYGGKVIMPPSALASLTNLEVEGPW 82
Query: 256 LFKLTN-QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
F+L N TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I L F K
Sbjct: 83 TFQLRNPANSAASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELVKGKFVK 142
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTII 373
Q QT FL+I++PKAVLE LRNF+ LT GD+I I+YNS ++ L V+ETKPG ++I+
Sbjct: 143 LQAQTVHFLEISDPKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETKPGGEGISIL 202
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
+ D+ VDFA PVGY EPE+ K M +++
Sbjct: 203 DTDLEVDFAAPVGYVEPERPKASALPTMASRLNI 236
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
P F+ K +SV+M PG +RE+V GGK+IMPPSAL LT L + P F+L N
Sbjct: 34 PNSFDEYLKAYSVAMLPGRQRENVSYGGKVIMPPSALASLTNLEVEGPWTFQLRNPANSA 93
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LPYW
Sbjct: 94 ASTHAGVLEFIAEEGVVHLPYWMM 117
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M PG +RE+V GGK+IMPPSAL LT L + P F+L N TH+GVLE
Sbjct: 43 AYSVAMLPGRQRENVSYGGKVIMPPSALASLTNLEVEGPWTFQLRNPANSAASTHAGVLE 102
Query: 146 L 146
Sbjct: 103 F 103
>gi|66824919|ref|XP_645814.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium discoideum AX4]
gi|74858159|sp|Q55BK0.1|UFD1_DICDI RecName: Full=Ubiquitin fusion degradation protein 1 homolog
gi|60473955|gb|EAL71893.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium discoideum AX4]
Length = 330
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
P + + +K F +S P E+ +E GGKI++PPSAL L+RLNI YPMLF+++N G+
Sbjct: 22 PGRYEQKFKAFPISFLP-KEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGK 80
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+H GVLEF+A+EG YLP WMM+NL L EGE ++I++ +L TF K QP+T +F+DI+
Sbjct: 81 KSHCGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDIS 140
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKAVLEN LR FA LT D I I+YN+ Y L V+E KP NA++IIE D++VDFAPP+
Sbjct: 141 NPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMD 200
Query: 387 YTE 389
E
Sbjct: 201 SKE 203
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
P + + +K F +S P E+ +E GGKI++PPSAL L+RLNI YPMLF+++N G+
Sbjct: 22 PGRYEQKFKAFPISFLP-KEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGK 80
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
+H GVLEF+A+EG YLP W
Sbjct: 81 KSHCGVLEFIAEEGICYLPLW 101
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 79 GKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 138
G+ + F +S P E+ +E GGKI++PPSAL L+RLNI YPMLF+++N G+
Sbjct: 23 GRYEQKFKAFPISFLP-KEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKK 81
Query: 139 THSGVLEL 146
+H GVLE
Sbjct: 82 SHCGVLEF 89
>gi|401841616|gb|EJT43979.1| UFD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 363
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 158/250 (63%), Gaps = 20/250 (8%)
Query: 199 GFNMFPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPM 255
G + F ++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPM
Sbjct: 10 GAHGFVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPM 67
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLT + GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K
Sbjct: 68 LFKLTVNETGRVTHCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKL 127
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
+PQ+ DFLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP + ++ +
Sbjct: 128 EPQSVDFLDISDPKAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSLKSICV 187
Query: 373 IECDMNVDFAPPVGYTEPE-KVKEKEED----------NMIDPVDL-MPEPSGFVAFHGT 420
IE D+ DFA PVGY EP+ K + ++D ++DP L S + + G
Sbjct: 188 IETDLVTDFAAPVGYVEPDYKALKAQQDKGKKGTSSRGQVLDPSVLGQGSMSTRINYAGV 247
Query: 421 GNRLDGKRKK 430
N + K+ K
Sbjct: 248 ANSIKNKQSK 257
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 10/124 (8%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
F ++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKL
Sbjct: 14 FVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPMLFKL 71
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSA 113
T + GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +
Sbjct: 72 TVNETGRVTHCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQS 131
Query: 114 LEQL 117
++ L
Sbjct: 132 VDFL 135
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 69 SGVLEFVADEGKVYLP------YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTR 119
SG F G V +P + C+ ++M N+R +D GGKI +PPSAL +L+
Sbjct: 3 SGFNSFGGAHGFVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSV 60
Query: 120 LNICYPMLFKLTNQKMGRITHSGVLEL 146
LNI YPMLFKLT + GR+TH GVLE
Sbjct: 61 LNIRYPMLFKLTVNETGRVTHCGVLEF 87
>gi|341038918|gb|EGS23910.1| putative ubiquitin fusion degradation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 368
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 135/187 (72%), Gaps = 3/187 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER ++ G KI +PPSALE++++L++ +P++ +L N GR TH
Sbjct: 25 FDEYYRCYPIIMAPGAERPELNYGSKIFLPPSALEKVSKLHVQWPIMLELINGAKGRHTH 84
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG+ Y+P WMM+ L LD G+++ +++ SL +A K QPQ +FL+I++P+
Sbjct: 85 AGVLEFVAEEGRAYIPQWMMQTLQLDVGDMIQVKTTSLELAQMVKLQPQDVNFLEISDPR 144
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IYE+ VL+ KP V++IE D++V+FAPPVG
Sbjct: 145 AVLERVFRNFAALTKGDVFNFEYNDEIYEVAVLDVKPETEKMGVSMIETDVSVEFAPPVG 204
Query: 387 YTEPEKV 393
Y EPE+V
Sbjct: 205 YVEPERV 211
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 58/80 (72%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KI +PPSALE++++L++ +P++ +L N GR TH
Sbjct: 25 FDEYYRCYPIIMAPGAERPELNYGSKIFLPPSALEKVSKLHVQWPIMLELINGAKGRHTH 84
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEFVA+EG+ Y+P W
Sbjct: 85 AGVLEFVAEEGRAYIPQWMM 104
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI +PPSALE++++L++ +P++ +L N GR TH+GVL
Sbjct: 29 YRCYPIIMAPGAERPELNYGSKIFLPPSALEKVSKLHVQWPIMLELINGAKGRHTHAGVL 88
Query: 145 EL 146
E
Sbjct: 89 EF 90
>gi|365760640|gb|EHN02346.1| Ufd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 363
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 158/250 (63%), Gaps = 20/250 (8%)
Query: 199 GFNMFPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPM 255
G + F ++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPM
Sbjct: 10 GAHGFVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPM 67
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFKLT + GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K
Sbjct: 68 LFKLTVNETGRVTHCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKL 127
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
+PQ+ DFLDI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP + ++ +
Sbjct: 128 EPQSVDFLDISDPKAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSLKSICV 187
Query: 373 IECDMNVDFAPPVGYTEPE-KVKEKEED----------NMIDPVDL-MPEPSGFVAFHGT 420
IE D+ DFA PVGY EP+ K + ++D ++DP L S + + G
Sbjct: 188 IETDLVTDFAAPVGYVEPDYKALKAQQDKGKKGTSSRGQVLDPSVLGQGSMSTRINYAGV 247
Query: 421 GNRLDGKRKK 430
N + K+ K
Sbjct: 248 ANSIKNKQSK 257
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 10/124 (8%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
F ++P+ F ++C+ ++M N+R +D GGKI +PPSAL +L+ LNI YPMLFKL
Sbjct: 14 FVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPMLFKL 71
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSA 113
T + GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +
Sbjct: 72 TVNETGRVTHCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQS 131
Query: 114 LEQL 117
++ L
Sbjct: 132 VDFL 135
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 69 SGVLEFVADEGKVYLP------YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTR 119
SG F G V +P + C+ ++M N+R +D GGKI +PPSAL +L+
Sbjct: 3 SGFNSFGGAHGFVNMPQTFEEFFRCYPIAMM--NDRIRKDDANFGGKIFLPPSALSKLSV 60
Query: 120 LNICYPMLFKLTNQKMGRITHSGVLEL 146
LNI YPMLFKLT + GR+TH GVLE
Sbjct: 61 LNIRYPMLFKLTVNETGRVTHCGVLEF 87
>gi|429862703|gb|ELA37339.1| ubiquitin fusion degradation protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 356
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 132/186 (70%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER ++ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 3 FDEYYRCYPMVMAPGAERPELNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 62
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
SGVLEFVA+EG+ YLP WMM L LD G+++ +++ SL +A K QPQ+ +FLDI++PK
Sbjct: 63 SGVLEFVAEEGRAYLPQWMMETLQLDVGDMIQVKTTSLELARLVKLQPQSTNFLDISDPK 122
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IY + VLE KP V +IE D+ VDFAPPVG
Sbjct: 123 AVLEKAFRNFATLTKGDIFNFEYNDEIYHVAVLEVKPETDKMGVCMIETDVEVDFAPPVG 182
Query: 387 YTEPEK 392
Y EPEK
Sbjct: 183 YVEPEK 188
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 59/80 (73%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 3 FDEYYRCYPMVMAPGAERPELNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 62
Query: 69 SGVLEFVADEGKVYLPYWCF 88
SGVLEFVA+EG+ YLP W
Sbjct: 63 SGVLEFVAEEGRAYLPQWMM 82
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KI +PPSAL+++++L++ +P+L ++ N + G+ +HSGVL
Sbjct: 7 YRCYPMVMAPGAERPELNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSHSGVL 66
Query: 145 EL 146
E
Sbjct: 67 EF 68
>gi|310794576|gb|EFQ30037.1| ubiquitin fusion degradation protein UFD1 [Glomerella graminicola
M1.001]
Length = 373
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 133/186 (71%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 16 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 75
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG+ YLP+WMM+ L LD G+++ I++ SL +A K QPQ+ +FLDI++PK
Sbjct: 76 AGVLEFVAEEGRAYLPHWMMQTLSLDVGDMIQIKTTSLELAKLVKLQPQSTNFLDISDPK 135
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IY + VLE KP V +IE D+ VDFA PVG
Sbjct: 136 AVLEKAFRNFAALTKGDVFNFEYNDEIYHVAVLEVKPETEKMGVCMIETDVEVDFAAPVG 195
Query: 387 YTEPEK 392
Y EPEK
Sbjct: 196 YVEPEK 201
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 16 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 75
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
+GVLEFVA+EG+ YLP+W
Sbjct: 76 AGVLEFVAEEGRAYLPHWMMQT 97
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H+GVL
Sbjct: 20 YRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSHAGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|73535905|pdb|1ZC1|A Chain A, Ufd1 Exhibits The Aaa-Atpase Fold With Two Distinct
Ubiquitin Interaction Sites
Length = 208
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 4/191 (2%)
Query: 205 DIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 263
++P+ F ++C+ ++M R +D GGKI +PPSAL +L+ LNI YPMLFKLT +
Sbjct: 16 NMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANE 75
Query: 264 MGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFL 323
GR+TH GVLEF+A+EG+VYLP WMM L + G L+ I S +P+ F K +PQ+ DFL
Sbjct: 76 TGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFL 135
Query: 324 DITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVD 380
DI++PKAVLEN LRNF+ LT D+I I+YN K +++ +LE KP ++ +IE D+ D
Sbjct: 136 DISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTD 195
Query: 381 FAPPVGYTEPE 391
FAPPVGY EP+
Sbjct: 196 FAPPVGYVEPD 206
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 62
++P+ F ++C+ ++M R +D GGKI +PPSAL +L+ LNI YPMLFKLT +
Sbjct: 16 NMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANE 75
Query: 63 MGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALEQL 117
GR+TH GVLEF+A+EG+VYLP W ++ + PG+ DV G + + P +++ L
Sbjct: 76 TGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFL 135
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M R +D GGKI +PPSAL +L+ LNI YPMLFKLT + GR+TH GV
Sbjct: 25 FRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGV 84
Query: 144 LEL 146
LE
Sbjct: 85 LEF 87
>gi|380483808|emb|CCF40390.1| ubiquitin fusion degradation protein UFD1 [Colletotrichum
higginsianum]
Length = 384
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 133/186 (71%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 26 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 85
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG+ YLP+WMM+ L LD G+++ I++ SL +A K QPQ+ +FLDI++PK
Sbjct: 86 AGVLEFVAEEGRAYLPHWMMQTLSLDVGDMIQIKTTSLELAKLVKLQPQSTNFLDISDPK 145
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IY + VLE KP V +IE D+ VDFA PVG
Sbjct: 146 AVLEKAFRNFAALTKGDIFNFEYNDEIYHVAVLEVKPETEKMGVCMIETDVEVDFAAPVG 205
Query: 387 YTEPEK 392
Y EPEK
Sbjct: 206 YVEPEK 211
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 26 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 85
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
+GVLEFVA+EG+ YLP+W
Sbjct: 86 AGVLEFVAEEGRAYLPHWMMQT 107
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER D+ G KI +PPSAL+++++L++ +P+L ++ N + G+ +H+GVL
Sbjct: 30 YRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSHAGVL 89
Query: 145 EL 146
E
Sbjct: 90 EF 91
>gi|395333691|gb|EJF66068.1| UFD1-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 464
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 157/264 (59%), Gaps = 15/264 (5%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ +K +SV+M PG R++V GGKIIMPPS L LT + + P +FKL N
Sbjct: 38 PRAYDEYFKAYSVAMLPGRPRDNVSYGGKIIMPPSVLANLTNMELESPWMFKLRNPGNPA 97
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG V+LP WMM+ L L+EG+ + I LP K Q Q+ DFL+I
Sbjct: 98 ASTHAGVLEFIAEEGCVHLPRWMMKTLRLEEGDPIRITGCELPKGKLVKLQAQSVDFLEI 157
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNVDFAPP 384
++PKAVLE LRNF+ LT GD+I I+YNS ++ L V+ET+PG +++++ D+ VDFA P
Sbjct: 158 SDPKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETQPGGEGISVLDTDLEVDFAAP 217
Query: 385 VGYTEPEKVKEKEEDNMIDPVDL--------MPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
VGY EPE+ K + M D +++ PS + F G + K D E+
Sbjct: 218 VGYVEPERPKAAPQPTMRDKLNIDLSSSTPGSSRPSSSMGFAGAAAKGPAISKGGDQWES 277
Query: 437 ----GGTPTKREYQ-RGIPHYDYE 455
G T R+ + +GI H E
Sbjct: 278 FKGKGETLQGRKTKGKGISHRKAE 301
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ +K +SV+M PG R++V GGKIIMPPS L LT + + P +FKL N
Sbjct: 38 PRAYDEYFKAYSVAMLPGRPRDNVSYGGKIIMPPSVLANLTNMELESPWMFKLRNPGNPA 97
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+A+EG V+LP W
Sbjct: 98 ASTHAGVLEFIAEEGCVHLPRW 119
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 137
+ Y Y+ +SV+M PG R++V GGKIIMPPS L LT + + P +FKL N
Sbjct: 39 RAYDEYFKAYSVAMLPGRPRDNVSYGGKIIMPPSVLANLTNMELESPWMFKLRNPGNPAA 98
Query: 138 ITHSGVLEL 146
TH+GVLE
Sbjct: 99 STHAGVLEF 107
>gi|226489140|emb|CAX74919.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 215
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 138/195 (70%), Gaps = 11/195 (5%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
M++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLDI+NPKAVLEN LR+FACLT GD+
Sbjct: 1 MLKNLDLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPKAVLENALRDFACLTVGDI 60
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMI----- 402
IAI+YN +IYEL VLETKP +AVTIIECDM+VDFAPPVGY + + DN+
Sbjct: 61 IAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQSTDSGSLSKLDNVDAHQIE 120
Query: 403 -DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGT----PTKREYQRGIPHYDYEPN 457
D +++ GF AF GTG RLDGK K+ T ET P+K +RG+P+YDY+P
Sbjct: 121 EDHIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNETNSDRPLGPSKNR-ERGVPNYDYQPG 179
Query: 458 TLVFLRNIKPASAHK 472
+L F RN K S K
Sbjct: 180 SLTFFRNSKLISTEK 194
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 146 LDGKRKKKDTVETGGT----PTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFN 201
LDGK K+ T ET P+K +RG+P+YDY+P +L F RN K S K + F
Sbjct: 143 LDGKTKQDKTNETNSDRPLGPSKNR-ERGVPNYDYQPGSLTFFRNSKLISTEKTEESVFK 201
Query: 202 MF 203
F
Sbjct: 202 PF 203
>gi|410078494|ref|XP_003956828.1| hypothetical protein KAFR_0D00460 [Kazachstania africana CBS 2517]
gi|372463413|emb|CCF57693.1| hypothetical protein KAFR_0D00460 [Kazachstania africana CBS 2517]
Length = 353
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 163/288 (56%), Gaps = 38/288 (13%)
Query: 199 GFN----MFPDIPRPFNRSYKCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICY 253
GFN F ++P+ F ++C+ +++ R+D GGKI +PPSAL +L+ LNI Y
Sbjct: 4 GFNPISAGFTNVPQVFEEFFRCYPIAIMNDRIRKDEANFGGKIFLPPSALNKLSMLNIRY 63
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PMLFKL + G +TH GVLEF+A+EG+ YLP WM+ L + G L+ I S +P+ F
Sbjct: 64 PMLFKLEANENGMVTHGGVLEFIAEEGRAYLPQWMLETLNVQPGSLLKITSTDVPLGQFV 123
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAV 370
K +PQ+ DFLDI++PKAVLEN LRNF+ L+ D++ I+YN+K Y++ +LE KP ++
Sbjct: 124 KLEPQSVDFLDISDPKAVLENVLRNFSTLSVDDIVEISYNNKTYKIKILEVKPESQAKSI 183
Query: 371 TIIECDMNVDFAPPVGYTEPE-----KVKEKEE-------------------DNMIDPVD 406
+IE D+ DFAPPVGY EP+ + KE+EE I+ D
Sbjct: 184 CVIETDLVTDFAPPVGYVEPDYEALRQQKEEEERQRKASRKFDPATVAQGSMSTRINYTD 243
Query: 407 LMPEPSGFVAFHGTGNRLDGKRKKK------DTVETGGTPTKREYQRG 448
+ AF G G +L GK KK + GTP + + G
Sbjct: 244 KLNSTKETSAFAGEGQKLSGKSTKKYVDIKEINISLDGTPARLDLPDG 291
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F ++P+ F ++C+ +++ R+D GGKI +PPSAL +L+ LNI YPMLFKL
Sbjct: 12 FTNVPQVFEEFFRCYPIAIMNDRIRKDEANFGGKIFLPPSALNKLSMLNIRYPMLFKLEA 71
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN----EREDVERGGKIIMPPSALE 115
+ G +TH GVLEF+A+EG+ YLP W ++++ PG+ DV G + + P +++
Sbjct: 72 NENGMVTHGGVLEFIAEEGRAYLPQWMLETLNVQPGSLLKITSTDVPLGQFVKLEPQSVD 131
Query: 116 QL 117
L
Sbjct: 132 FL 133
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ +++ R+D GGKI +PPSAL +L+ LNI YPMLFKL + G +TH GV
Sbjct: 23 FRCYPIAIMNDRIRKDEANFGGKIFLPPSALNKLSMLNIRYPMLFKLEANENGMVTHGGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|356547269|ref|XP_003542038.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin fusion degradation
protein 1 homolog [Glycine max]
Length = 316
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 154/242 (63%), Gaps = 11/242 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH
Sbjct: 7 FEQFYRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTH 63
Query: 270 SGVLEFVADEGKVYLP---YWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
GVLEFV+DEG +Y+ Y MM N+LL EG++V ++ +L T+ K QP T DFLDI+
Sbjct: 64 CGVLEFVSDEGTIYIHHNGYAMMENMLLQEGDIVKVKIATLAKGTYVKLQPHTKDFLDIS 123
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKA+LE LR+++CLT+GD I + YN+K Y + ++ET P AV IIE D VDFAPP+
Sbjct: 124 NPKAILETTLRSYSCLTAGDTIMVPYNNKKYYIDIVETIPSPAVIIIETDCEVDFAPPLD 183
Query: 387 YTEPEKVKEKEEDNMIDPVDLMPEPSGFVA----FHGTGNRLDGKRKKKDTVETGGTPTK 442
Y EPEK + + P ++ EP +A F +G LDGK + + + K
Sbjct: 184 YKEPEKQAKPVVFDRKQP-EVEDEPPAKIARLTPFTVSGRHLDGKPSAQSVEQASSSELK 242
Query: 443 RE 444
++
Sbjct: 243 QK 244
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH
Sbjct: 7 FEQFYRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTH 63
Query: 69 SGVLEFVADEGKVYLPYWCFSV 90
GVLEFV+DEG +Y+ + +++
Sbjct: 64 CGVLEFVSDEGTIYIHHNGYAM 85
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS E+ D+E+G KIIMPPSAL++L L+I YPMLF++ N R+TH GVL
Sbjct: 11 YRCYPVSFI---EKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTHCGVL 67
Query: 145 EL 146
E
Sbjct: 68 EF 69
>gi|322705273|gb|EFY96860.1| ubiquitin fusion degradation protein 1 [Metarhizium anisopliae
ARSEF 23]
Length = 378
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 135/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L ++ N + GR +H
Sbjct: 32 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGRHSH 91
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG+ Y+P WMM L +D G+++ I + SL +A K QPQ+ +FL+I++PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 151
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +IYE+ VL+ KP V++IE D++V+FAPPVG
Sbjct: 152 AVLERAFRNFATLTKGDVFNFEYNDEIYEVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 387 YTEPEK 392
Y EPE+
Sbjct: 212 YVEPER 217
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L ++ N + GR +H
Sbjct: 32 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGRHSH 91
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 92 AGVLEFIAEEGRAYIPQWMM 111
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M PG ER ++ G KII+PPSAL+++++L++ +P+L ++ N + GR +H+GVL
Sbjct: 36 YRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGRHSHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|344234539|gb|EGV66407.1| UFD1-domain-containing protein [Candida tenuis ATCC 10573]
Length = 356
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 133/198 (67%), Gaps = 4/198 (2%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG F + F ++C+ ++M P + R +D GGKI +P SAL +L+ L+I YPML
Sbjct: 10 FGGAAFAPMNNKFEDYFRCYPIAMMPDSIRKDDANYGGKIFLPSSALNKLSMLHIRYPML 69
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F+L N+ + THSG+LEFVA+EG+ YLP WMM L L G+LV I + LP+ F K +
Sbjct: 70 FELLNETTQKKTHSGILEFVAEEGRAYLPQWMMSTLELQPGQLVQISNCDLPLGRFVKIE 129
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTII 373
PQ+ DFL+I++PKAVLEN LR F+ LT D+I INYN IY + VLETKP G + ++
Sbjct: 130 PQSVDFLEISDPKAVLENVLRRFSTLTVDDIIEINYNDTIYGIKVLETKPESSGQGICVV 189
Query: 374 ECDMNVDFAPPVGYTEPE 391
E D+ DFAPPVGY EPE
Sbjct: 190 ETDLETDFAPPVGYVEPE 207
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P + R +D GGKI +P SAL +L+ L+I YPMLF+L N+ + T
Sbjct: 22 FEDYFRCYPIAMMPDSIRKDDANYGGKIFLPSSALNKLSMLHIRYPMLFELLNETTQKKT 81
Query: 68 HSGVLEFVADEGKVYLPYWCFSV 90
HSG+LEFVA+EG+ YLP W S
Sbjct: 82 HSGILEFVAEEGRAYLPQWMMST 104
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P + R +D GGKI +P SAL +L+ L+I YPMLF+L N+ + THSG+
Sbjct: 26 FRCYPIAMMPDSIRKDDANYGGKIFLPSSALNKLSMLHIRYPMLFELLNETTQKKTHSGI 85
Query: 144 LEL 146
LE
Sbjct: 86 LEF 88
>gi|302692236|ref|XP_003035797.1| hypothetical protein SCHCODRAFT_74188 [Schizophyllum commune H4-8]
gi|300109493|gb|EFJ00895.1| hypothetical protein SCHCODRAFT_74188 [Schizophyllum commune H4-8]
Length = 447
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR F+ K +SV+M PG R++V GGKIIMPPSAL +LTRL++ P +F+L N
Sbjct: 9 PRQFDEYLKAYSVAMLPGRPRDNVSYGGKIIMPPSALARLTRLDLQDPWMFQLRNPANPA 68
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I LP F K Q QT FL+I
Sbjct: 69 ASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELPKGKFVKLQAQTVHFLEI 128
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNVDFAPP 384
++PKAVLE LRNF LT GD+I I+YNS ++ L V+E PG +++++ D+ VDFAPP
Sbjct: 129 SDPKAVLEQALRNFTALTQGDIIEISYNSIVFGLLVMEAVPGGEGISVLDTDLEVDFAPP 188
Query: 385 VGYTE 389
VGY E
Sbjct: 189 VGYVE 193
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR F+ K +SV+M PG R++V GGKIIMPPSAL +LTRL++ P +F+L N
Sbjct: 9 PRQFDEYLKAYSVAMLPGRPRDNVSYGGKIIMPPSALARLTRLDLQDPWMFQLRNPANPA 68
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LPYW
Sbjct: 69 ASTHAGVLEFIAEEGVVHLPYWMM 92
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M PG R++V GGKIIMPPSAL +LTRL++ P +F+L N TH+GVLE
Sbjct: 18 AYSVAMLPGRPRDNVSYGGKIIMPPSALARLTRLDLQDPWMFQLRNPANPAASTHAGVLE 77
Query: 146 L 146
Sbjct: 78 F 78
>gi|356544568|ref|XP_003540721.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 365
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 143/218 (65%), Gaps = 5/218 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y+C+ E+ ++E GGKIIMPPSAL +L L+I YPMLF+L N R+TH
Sbjct: 64 FQDVYRCYPACFL---EKPNLENGGKIIMPPSALLRLAHLDIVYPMLFELRNPSAERVTH 120
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG +Y+P WMM+N+ L E V +++ +P AT++K QP T DFLDI++PK
Sbjct: 121 CGVLEFTADEGIIYMPEWMMKNMKLQERNTVILKNTHVPRATYAKLQPHTKDFLDISDPK 180
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
++LE LR+++CLT+GD I I YN+K Y + ++ETKP +AV+IIE D VDFA P+ Y E
Sbjct: 181 SILEISLRSYSCLTTGDTIMIPYNNKKYYIDIVETKPSHAVSIIETDCEVDFAQPLDYKE 240
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
PEK+ + + + + F G G RLDG+
Sbjct: 241 PEKLLPSASSD--KGCTEATKTARIIPFTGFGRRLDGE 276
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y+C+ E+ ++E GGKIIMPPSAL +L L+I YPMLF+L N R+TH
Sbjct: 64 FQDVYRCYPACFL---EKPNLENGGKIIMPPSALLRLAHLDIVYPMLFELRNPSAERVTH 120
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF ADEG +Y+P W
Sbjct: 121 CGVLEFTADEGIIYMPEW 138
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ E+ ++E GGKIIMPPSAL +L L+I YPMLF+L N R+TH GVL
Sbjct: 68 YRCYPACFL---EKPNLENGGKIIMPPSALLRLAHLDIVYPMLFELRNPSAERVTHCGVL 124
Query: 145 ELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFP 204
E T + G + + E NT++ P + + + Q F
Sbjct: 125 EF--------TADEGIIYMPEWMMKNMKL--QERNTVILKNTHVPRATYAKLQPHTKDFL 174
Query: 205 DIPRPFN------RSYKCFSVS---MFPGNERE 228
DI P + RSY C + M P N ++
Sbjct: 175 DISDPKSILEISLRSYSCLTTGDTIMIPYNNKK 207
>gi|406602377|emb|CCH46086.1| Ubiquitin fusion degradation protein 1 [Wickerhamomyces ciferrii]
Length = 320
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 145/237 (61%), Gaps = 22/237 (9%)
Query: 221 MFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADE 279
M P + R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G THSGVLEFVA+E
Sbjct: 1 MMPDSTRKDDANFGGKIFLPPSALNRLTMLHIRYPMLFELKNEDQGLKTHSGVLEFVAEE 60
Query: 280 GKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNF 339
G+VYLP WMM L L G ++ I + +P+ F K +PQ+ DFLDI++PKAVLEN LR F
Sbjct: 61 GRVYLPQWMMSTLQLKPGAIIKITNSDVPLGKFVKIEPQSVDFLDISDPKAVLENVLRKF 120
Query: 340 ACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPE----- 391
+ L+ D+I INYN KIY + VLE KP N++ +IE D+ DFAPPVGY EP+
Sbjct: 121 STLSVNDIIEINYNDKIYGIKVLEAKPESDSNSICVIETDLETDFAPPVGYVEPDYSKNT 180
Query: 392 --KVKEKEEDNMIDPVDLMPEPSGF-----------VAFHGTGNRLDGKRKKKDTVE 435
K KE + + P+ M + + +F G G +L GK K + E
Sbjct: 181 TSKSKESAKPSAGKPLGTMAKSINYKELAQKASQEISSFKGDGVKLSGKASKPKSAE 237
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 20 MFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADE 78
M P + R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G THSGVLEFVA+E
Sbjct: 1 MMPDSTRKDDANFGGKIFLPPSALNRLTMLHIRYPMLFELKNEDQGLKTHSGVLEFVAEE 60
Query: 79 GKVYLPYWCFS-VSMFPG 95
G+VYLP W S + + PG
Sbjct: 61 GRVYLPQWMMSTLQLKPG 78
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 92 MFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M P + R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G THSGVLE
Sbjct: 1 MMPDSTRKDDANFGGKIFLPPSALNRLTMLHIRYPMLFELKNEDQGLKTHSGVLEF 56
>gi|353241350|emb|CCA73171.1| related to UFD1-ubiquitin fusion degradation protein
[Piriformospora indica DSM 11827]
Length = 525
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 152/272 (55%), Gaps = 40/272 (14%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK-MG 265
P F+ YK +SV+MFP ERE+V GGKI+MPPSAL +L++LN P +F+L N K
Sbjct: 83 PHAFDEHYKAYSVAMFPRAERENVSYGGKILMPPSALARLSQLNFPSPWMFQLRNPKNAA 142
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+ADEG V+LP+WMM+ L L+E + + I SLP F K Q Q F+++
Sbjct: 143 ASTHAGVLEFIADEGCVFLPHWMMKTLKLNEADPIRITGASLPKGKFVKLQAQETSFVEV 202
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK----------------PGNA 369
++PKAVLE LRNF CLT GD+I I+YNS I+ L V+ET+ P
Sbjct: 203 SDPKAVLEQALRNFTCLTQGDIIEISYNSIIFGLLVMETRTTSQSGPASSRSATPAPVPG 262
Query: 370 VTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL--------MPEPSG-------- 413
+ + + D+ VDFA P G+ EP + K + M + L PSG
Sbjct: 263 IAVFDTDLEVDFATPKGWKEPVRAPPKPIETMATRLGLDGGKTASGKSTPSGSRPGSSLG 322
Query: 414 -------FVAFHGTGNRLDGKRKKKDTVETGG 438
F AF G G L+G++ K V TGG
Sbjct: 323 AVVDDDAFEAFKGRGETLNGRKTKGKGVRTGG 354
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK-MG 64
P F+ YK +SV+MFP ERE+V GGKI+MPPSAL +L++LN P +F+L N K
Sbjct: 83 PHAFDEHYKAYSVAMFPRAERENVSYGGKILMPPSALARLSQLNFPSPWMFQLRNPKNAA 142
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+ADEG V+LP+W
Sbjct: 143 ASTHAGVLEFIADEGCVFLPHW 164
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK-MGRITHSGV 143
Y +SV+MFP ERE+V GGKI+MPPSAL +L++LN P +F+L N K TH+GV
Sbjct: 90 YKAYSVAMFPRAERENVSYGGKILMPPSALARLSQLNFPSPWMFQLRNPKNAAASTHAGV 149
Query: 144 LEL 146
LE
Sbjct: 150 LEF 152
>gi|260942687|ref|XP_002615642.1| hypothetical protein CLUG_04524 [Clavispora lusitaniae ATCC 42720]
gi|238850932|gb|EEQ40396.1| hypothetical protein CLUG_04524 [Clavispora lusitaniae ATCC 42720]
Length = 380
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 150/255 (58%), Gaps = 24/255 (9%)
Query: 206 IPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 264
I F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+LTN+ +
Sbjct: 43 ISNKFEDYFRCYPVAMMPDNVRKDDANYGGKIFLPPSALNRLTMLHIRYPMLFELTNEAL 102
Query: 265 GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
THSGVLEFVA+EG+VY+P WMM L L G LV I + LP F K +PQ+ DFLD
Sbjct: 103 NVRTHSGVLEFVAEEGRVYIPQWMMETLKLQPGSLVKIANCDLPNGRFVKIEPQSVDFLD 162
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDF 381
I++PKAVLEN LR F+ LT D+I +YN Y + VLE KP N ++ ++E D+ DF
Sbjct: 163 ISDPKAVLENTLRKFSTLTVDDVIENDYNDTKYGIRVLEVKPENPNRSICVVETDLETDF 222
Query: 382 APPVGYTEPEKVKE--KEEDNMIDP------------------VDLMPEPSGFVAFHGTG 421
APPVGY EPE + K IDP D++ + + + G+G
Sbjct: 223 APPVGYVEPEYTPKSVKPSTTPIDPSKVNRSAGAATMAKSIKYADIVAKGNKTQVYQGSG 282
Query: 422 NRLDGKRKKKDTVET 436
+L GK K+ T
Sbjct: 283 QKLSGKGPAKEEENT 297
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 5 IPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
I F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+LTN+ +
Sbjct: 43 ISNKFEDYFRCYPVAMMPDNVRKDDANYGGKIFLPPSALNRLTMLHIRYPMLFELTNEAL 102
Query: 64 GRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGNERE----DVERGGKIIMPPSALEQLT 118
THSGVLEFVA+EG+VY+P W ++ + PG+ + D+ G + + P +++
Sbjct: 103 NVRTHSGVLEFVAEEGRVYIPQWMMETLKLQPGSLVKIANCDLPNGRFVKIEPQSVD--- 159
Query: 119 RLNICYP-MLFKLTNQKMGRITHSGVLELD 147
L+I P + + T +K +T V+E D
Sbjct: 160 FLDISDPKAVLENTLRKFSTLTVDDVIEND 189
>gi|448118340|ref|XP_004203471.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|448120748|ref|XP_004204054.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|359384339|emb|CCE79043.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|359384922|emb|CCE78457.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
Length = 353
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 150/259 (57%), Gaps = 24/259 (9%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + F + F ++ + ++M P R +D GGKI +PPSAL +LT L+I YPML
Sbjct: 10 FGASAFAPMDNKFEDYFRSYPITMMPDEIRKDDANYGGKIFLPPSALNKLTMLHIRYPML 69
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F+L N+ ++THSGVLEFVA+EG+ YLP WMM L L G ++ I + LP+ F K +
Sbjct: 70 FELENEGCDKLTHSGVLEFVAEEGRAYLPQWMMNTLDLTPGSILKIANCDLPLGKFVKIE 129
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTII 373
PQ+ DFLDIT+ KAVLEN LR F+ LT GD+I INYN Y + VLE KP + ++
Sbjct: 130 PQSVDFLDITDHKAVLENVLRKFSTLTIGDIIEINYNDSTYAIKVLEVKPESESKGICVV 189
Query: 374 ECDMNVDFAPPVGYTEPE-KVKEKEEDN-------------------MIDPVDLMPEPSG 413
E D+ DFAPPVGY EPE K + KE + ++ L+ E S
Sbjct: 190 ETDLETDFAPPVGYVEPEYKPQSKEPSSRPIKPSSVNKSAGAGSMAKKLEYAKLVGEAST 249
Query: 414 FVAFHGTGNRLDGKRKKKD 432
F G G L GK K ++
Sbjct: 250 SSTFKGEGQSLSGKSKTEN 268
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++ + ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N+ ++T
Sbjct: 22 FEDYFRSYPITMMPDEIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELENEGCDKLT 81
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
HSGVLEFVA+EG+ YLP W ++ + PG+
Sbjct: 82 HSGVLEFVAEEGRAYLPQWMMNTLDLTPGS 111
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 70 GVLEFVADEGKVYLPYWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLF 128
G F + K + + ++M P R +D GGKI +PPSAL +LT L+I YPMLF
Sbjct: 11 GASAFAPMDNKFEDYFRSYPITMMPDEIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLF 70
Query: 129 KLTNQKMGRITHSGVLEL 146
+L N+ ++THSGVLE
Sbjct: 71 ELENEGCDKLTHSGVLEF 88
>gi|190346739|gb|EDK38899.2| hypothetical protein PGUG_02997 [Meyerozyma guilliermondii ATCC
6260]
Length = 354
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 148/248 (59%), Gaps = 25/248 (10%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ T
Sbjct: 23 FEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKT 82
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEFVA+EG+ YLP WMM L + G L+ I + LP+ +F K +PQ+ DFLDI++P
Sbjct: 83 HSGVLEFVAEEGRAYLPQWMMATLNVSPGSLLKISNCDLPLGSFVKIEPQSVDFLDISDP 142
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I INYN Y + VLE KP + ++E D+ DFAPPV
Sbjct: 143 KAVLENVLRKFSTLTVNDIIEINYNDATYGIKVLEAKPESSSQGICVVETDLQTDFAPPV 202
Query: 386 GYTEPE---KVKEKEED-----------------NMIDPVDLMPEPSGFVAFHGTGNRLD 425
GY EPE VKE + N I+ ++ E S F G+G +L
Sbjct: 203 GYVEPEYKPAVKEPQSKPITPSSVNRGVGAGTMANSINYAKIVAEQSNNT-FKGSGQKLS 261
Query: 426 GKRKKKDT 433
GK ++ T
Sbjct: 262 GKPSQEAT 269
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ T
Sbjct: 23 FEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKT 82
Query: 68 HSGVLEFVADEGKVYLPYWCFS-VSMFPGN 96
HSGVLEFVA+EG+ YLP W + +++ PG+
Sbjct: 83 HSGVLEFVAEEGRAYLPQWMMATLNVSPGS 112
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ THSGV
Sbjct: 27 FRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKTHSGV 86
Query: 144 LEL 146
LE
Sbjct: 87 LEF 89
>gi|241951038|ref|XP_002418241.1| ubiquitin fusion degradation protein, putative [Candida
dubliniensis CD36]
gi|223641580|emb|CAX43541.1| ubiquitin fusion degradation protein, putative [Candida
dubliniensis CD36]
Length = 363
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 152/263 (57%), Gaps = 26/263 (9%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + FP F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPML
Sbjct: 14 FGSSGFPS--NKFEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPML 71
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F++ N++ ++THSGVLEF A+EG+ YLP WMM L L G L+ I + L + F K +
Sbjct: 72 FEIKNEQNEKLTHSGVLEFTAEEGRTYLPQWMMNTLELSPGSLIKITNCDLNLGKFVKIE 131
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTII 373
PQ+ DFLDI++PKAVLEN LR F+ LT D+I +NYN IY + VLE K P V ++
Sbjct: 132 PQSVDFLDISDPKAVLENVLRKFSTLTVNDVIEVNYNDAIYGIKVLEVKPESPSKGVCVV 191
Query: 374 ECDMNVDFAPPVGYTEPE-KVKEKE-EDNMIDP------------------VDLMPEPSG 413
E D+ DFAPPVGY EPE K K E + IDP L+ E
Sbjct: 192 ETDLETDFAPPVGYVEPEYKPKTVEPQSTPIDPSKVNKSAGAATMAKSINYAKLVAEGGK 251
Query: 414 FVAFHGTGNRLDGKRKKKDTVET 436
F G+G +L GK D +T
Sbjct: 252 TTKFSGSGQKLSGKSIDMDKDQT 274
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
HSGVLEF A+EG+ YLP W ++ + PG+
Sbjct: 84 HSGVLEFTAEEGRTYLPQWMMNTLELSPGS 113
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++THSGV
Sbjct: 28 FRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLTHSGV 87
Query: 144 LEL 146
LE
Sbjct: 88 LEF 90
>gi|343429376|emb|CBQ72949.1| related to UFD1-ubiquitin fusion degradation protein [Sporisorium
reilianum SRZ2]
Length = 431
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--T 260
FP PR ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 23 FPRPPRAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRST 82
Query: 261 NQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
R TH+GVLEF+ADEG V+LP WMMR L L EG+ + + +LP K QPQT
Sbjct: 83 GASEARRTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGATLPKGRMVKIQPQTV 142
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNV 379
DFL+I++PKAVLE RNF+ LT GD++ I+YN +E+ ++E P + ++IIE D+ V
Sbjct: 143 DFLEISDPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPNADGISIIETDLEV 202
Query: 380 DFAPPVGYTE 389
DFAPP GY E
Sbjct: 203 DFAPPKGYVE 212
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--T 59
FP PR ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 23 FPRPPRAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRST 82
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
R TH+GVLEF+ADEG V+LP W
Sbjct: 83 GASEARRTHAGVLEFIADEGNVHLPAW 109
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--TNQKMG 136
+ Y Y+ +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 28 RAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSTGASEA 87
Query: 137 RITHSGVLEL 146
R TH+GVLE
Sbjct: 88 RRTHAGVLEF 97
>gi|238882069|gb|EEQ45707.1| ubiquitin fusion degradation protein 1 [Candida albicans WO-1]
Length = 363
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 152/259 (58%), Gaps = 26/259 (10%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + FP F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPML
Sbjct: 14 FGSSGFPS--NKFEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPML 71
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F++ N++ ++THSGVLEF+A+EG+ YLP WMM L L G L+ I + L + F K +
Sbjct: 72 FEIKNEQNEKLTHSGVLEFIAEEGRTYLPQWMMNTLELTPGSLIKITNCDLNLGKFVKIE 131
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTII 373
PQ+ DFLDI++PKAVLEN LR F+ LT D+I +NYN IY + VLE KP + + ++
Sbjct: 132 PQSVDFLDISDPKAVLENVLRKFSTLTVNDIIEVNYNDAIYGIRVLEVKPDSTSKGICVV 191
Query: 374 ECDMNVDFAPPVGYTEPE-KVKEKEEDNM-IDP------------------VDLMPEPSG 413
E D+ DFAPPVGY EPE K K E + IDP L+ E
Sbjct: 192 ETDLETDFAPPVGYVEPEYKPKTVEPSSKPIDPSKVNKSAGAATMAKSINYAKLVAEAGK 251
Query: 414 FVAFHGTGNRLDGKRKKKD 432
F G+G +L GK D
Sbjct: 252 TTKFSGSGQKLSGKSIDMD 270
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
HSGVLEF+A+EG+ YLP W ++ + PG+
Sbjct: 84 HSGVLEFIAEEGRTYLPQWMMNTLELTPGS 113
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++THSGV
Sbjct: 28 FRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLTHSGV 87
Query: 144 LEL 146
LE
Sbjct: 88 LEF 90
>gi|146418605|ref|XP_001485268.1| hypothetical protein PGUG_02997 [Meyerozyma guilliermondii ATCC
6260]
Length = 354
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 148/248 (59%), Gaps = 25/248 (10%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ T
Sbjct: 23 FEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKT 82
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEFVA+EG+ YLP WMM L + G L+ I + LP+ +F K +PQ+ DFLDI++P
Sbjct: 83 HSGVLEFVAEEGRAYLPQWMMATLNVSPGLLLKISNCDLPLGSFVKIEPQSVDFLDISDP 142
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I INYN Y + VLE KP + ++E D+ DFAPPV
Sbjct: 143 KAVLENVLRKFSTLTVNDIIEINYNDATYGIKVLEAKPESSSQGICVVETDLQTDFAPPV 202
Query: 386 GYTEPE---KVKEKEED-----------------NMIDPVDLMPEPSGFVAFHGTGNRLD 425
GY EPE VKE + N I+ ++ E S F G+G +L
Sbjct: 203 GYVEPEYKPAVKEPQSKPITPSSVNRGVGAGTMANSINYAKIVAEQSNNT-FKGSGQKLS 261
Query: 426 GKRKKKDT 433
GK ++ T
Sbjct: 262 GKPSQEAT 269
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ T
Sbjct: 23 FEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKT 82
Query: 68 HSGVLEFVADEGKVYLPYWCFS-VSMFPG 95
HSGVLEFVA+EG+ YLP W + +++ PG
Sbjct: 83 HSGVLEFVAEEGRAYLPQWMMATLNVSPG 111
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ V+M P N R +D GGKI +PPSAL +LT L+I YPMLF+L N+ THSGV
Sbjct: 27 FRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAESVKTHSGV 86
Query: 144 LEL 146
LE
Sbjct: 87 LEF 89
>gi|150864151|ref|XP_001382865.2| ubiquitin fusion degradation protein I [Scheffersomyces stipitis
CBS 6054]
gi|149385407|gb|ABN64836.2| ubiquitin fusion degradation protein I [Scheffersomyces stipitis
CBS 6054]
Length = 362
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ ++M N R +D GGKI +PPSAL +LT L+I YPMLF+L+N+ T
Sbjct: 24 FEDYFRCYPIAMMADNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELSNEAQAVRT 83
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEFVA+EG+VY+P WMM L ++ G L+ I + LP+ +F K +PQ+ DFLDI++P
Sbjct: 84 HSGVLEFVAEEGRVYIPQWMMTTLKINPGGLLKISNCDLPLGSFVKIEPQSVDFLDISDP 143
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I INYN I+ + VL+ KP ++ ++E D+ DFAPPV
Sbjct: 144 KAVLENVLRKFSTLTVNDIIEINYNDSIFGIKVLDVKPKSDSTSICVVETDLETDFAPPV 203
Query: 386 GYTEPEKVKEKEEDNMIDPV 405
GY EPE +K E + P+
Sbjct: 204 GYVEPEYKPKKVESSSAKPI 223
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M N R +D GGKI +PPSAL +LT L+I YPMLF+L+N+ T
Sbjct: 24 FEDYFRCYPIAMMADNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELSNEAQAVRT 83
Query: 68 HSGVLEFVADEGKVYLPYWCFSV 90
HSGVLEFVA+EG+VY+P W +
Sbjct: 84 HSGVLEFVAEEGRVYIPQWMMTT 106
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M N R +D GGKI +PPSAL +LT L+I YPMLF+L+N+ THSGV
Sbjct: 28 FRCYPIAMMADNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELSNEAQAVRTHSGV 87
Query: 144 LEL 146
LE
Sbjct: 88 LEF 90
>gi|346323582|gb|EGX93180.1| ubiquitin fusion degradation protein [Cordyceps militaris CM01]
Length = 463
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 171/285 (60%), Gaps = 15/285 (5%)
Query: 116 QLTRLNICYPMLFKLTNQKM--GRITHSGVLELDGKRKKKDTVETGGTPTKREYQRG--- 170
Q+ RL + + KL+N + +T + V L KR+ + T P + QRG
Sbjct: 25 QIRRLEMW---ITKLSNLILIISHMTSTPVQSLLSKRQTAKAIATAA-PHHKHPQRGRRI 80
Query: 171 IPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDV 230
+ Y+P F N P S + I + F+ Y+C+ V M PGNER ++
Sbjct: 81 LSSNMYQPG---FGGNFDPNSIDHLYNMARGGRRPIIQRFDEYYRCYPVIMAPGNERPEL 137
Query: 231 ERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMR 290
G KI++PPSAL+++++L++ +P+ +L N + GR +H+GVLEF+A+EG+ Y+P WMM
Sbjct: 138 NYGSKILLPPSALDKVSKLHVQWPLQMELINGEKGRHSHAGVLEFIAEEGRAYIPQWMME 197
Query: 291 NLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAI 350
L ++ G+++ I + L +A K QPQ+ +FL+I++PKAVLE RNFA LT GD+
Sbjct: 198 TLGMEVGDMIQIRTTLLELAKLVKLQPQSTNFLEISDPKAVLERAFRNFATLTKGDVFNF 257
Query: 351 NYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTEPEK 392
YN ++Y++ VL+ +P V++IE D++V+FAPPVGY EPE+
Sbjct: 258 AYNDEVYDVAVLDVQPETDKMGVSMIETDVSVEFAPPVGYVEPER 302
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ V M PGNER ++ G KI++PPSAL+++++L++ +P+ +L N + GR +H
Sbjct: 117 FDEYYRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLQMELINGEKGRHSH 176
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 177 AGVLEFIAEEGRAYIPQWMM 196
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M PGNER ++ G KI++PPSAL+++++L++ +P+ +L N + GR +H+GVL
Sbjct: 121 YRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLQMELINGEKGRHSHAGVL 180
Query: 145 EL 146
E
Sbjct: 181 EF 182
>gi|302915499|ref|XP_003051560.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732499|gb|EEU45847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 388
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 200 FNMFPDIPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+NM RP F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+
Sbjct: 18 YNMARHGRRPIVQRFDEYYRCYPLIMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPL 77
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
L +L N + G+ +H+GVLEF+A+EG+ Y+P WMM L +D G+++ I + SL +A K
Sbjct: 78 LMELINGEKGKHSHAGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKL 137
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
QPQ+ FL+I++PKAVLE RNFA LT GD+ +YN ++YE+ VL+ KP V++
Sbjct: 138 QPQSVSFLEISDPKAVLEKAFRNFATLTKGDVFNFSYNDEVYEVAVLDVKPETDKMGVSM 197
Query: 373 IECDMNVDFAPPVGYTEPEK 392
IE D++V+FAPPVGY EPE+
Sbjct: 198 IETDVSVEFAPPVGYVEPER 217
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + G+ +H
Sbjct: 32 FDEYYRCYPLIMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSH 91
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 92 AGVLEFIAEEGRAYIPQWMM 111
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + G+ +H+GVL
Sbjct: 36 YRCYPLIMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|400597884|gb|EJP65608.1| ubiquitin fusion degradation protein [Beauveria bassiana ARSEF
2860]
Length = 359
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 135/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ V M PGNER ++ G KI++PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 13 FDEYYRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLLMELINGEKGRHSH 72
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG+ Y+P WMM L ++ G+++ I + L +A K QPQ+ +FL+I++PK
Sbjct: 73 AGVLEFIAEEGRAYIPQWMMETLGMEVGDMIQIRTTLLELAKMVKLQPQSTNFLEISDPK 132
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN ++Y++ VL+ KP V++IE D++VDFAPPVG
Sbjct: 133 AVLERAFRNFATLTKGDVFNFEYNDEVYDVAVLDVKPETDKMGVSMIETDVSVDFAPPVG 192
Query: 387 YTEPEK 392
Y EPE+
Sbjct: 193 YVEPER 198
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 61/80 (76%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ V M PGNER ++ G KI++PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 13 FDEYYRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLLMELINGEKGRHSH 72
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 73 AGVLEFIAEEGRAYIPQWMM 92
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M PGNER ++ G KI++PPSAL+++++L++ +P+L +L N + GR +H+GVL
Sbjct: 17 YRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLLMELINGEKGRHSHAGVL 76
Query: 145 EL 146
E
Sbjct: 77 EF 78
>gi|46123755|ref|XP_386431.1| hypothetical protein FG06255.1 [Gibberella zeae PH-1]
Length = 380
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 141/200 (70%), Gaps = 7/200 (3%)
Query: 200 FNMFPDIPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+NM RP F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+
Sbjct: 18 YNMARHGRRPIVQRFDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPL 77
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
L +L N + GR +H+GVLEF+A+EG+ Y+P WMM L +D G+++ I + SL +A K
Sbjct: 78 LMELINGEKGRHSHAGVLEFIAEEGRAYIPQWMMVTLGMDVGDMIQIRTTSLELAKMVKL 137
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
QPQ+ +FL+I++PKAVLE RNFA LT GD+ +YN ++Y++ VL+ KP V++
Sbjct: 138 QPQSVNFLEISDPKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLDVKPETDKMGVSM 197
Query: 373 IECDMNVDFAPPVGYTEPEK 392
IE D++V+FAPPVGY EPE+
Sbjct: 198 IETDVSVEFAPPVGYVEPER 217
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 32 FDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 91
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 92 AGVLEFIAEEGRAYIPQWMM 111
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H+GVL
Sbjct: 36 YRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|303274673|ref|XP_003056652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461004|gb|EEH58297.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 363
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 150/246 (60%), Gaps = 30/246 (12%)
Query: 214 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRITHSGV 272
Y+ + VS +R +E G K+I+PPSAL++LTR I +PMLF++TN K + TH GV
Sbjct: 15 YRVYPVSFI---DRPQLENGDKVILPPSALDRLTRAGIDEFPMLFEITNVKQKKKTHCGV 71
Query: 273 LEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVL 332
LEFVADEG VYLPYWMM+NLLL EG++V +S LP ++ K +P T DF+DI+NPKAVL
Sbjct: 72 LEFVADEGVVYLPYWMMQNLLLAEGDVVKFQSAKLPKGSYVKLRPHTKDFMDISNPKAVL 131
Query: 333 ENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEK 392
E LR++ CLTSGD I I+YN+K Y + +++ KP A++I++ D VDFAPP+ Y EP
Sbjct: 132 ETTLRSYTCLTSGDSILISYNNKRYFIDIVDAKPAPAISIVDTDCEVDFAPPLDYVEPAF 191
Query: 393 VK--------------------------EKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDG 426
K E+ I P + + F+AF G G RLDG
Sbjct: 192 EKPAEARAAAAAAAAAAAGGGGAEGADGGAEKGGEIAPAEAADDAPKFLAFAGGGRRLDG 251
Query: 427 KRKKKD 432
K + D
Sbjct: 252 KSARDD 257
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 13 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRITHSGV 71
Y+ + VS +R +E G K+I+PPSAL++LTR I +PMLF++TN K + TH GV
Sbjct: 15 YRVYPVSFI---DRPQLENGDKVILPPSALDRLTRAGIDEFPMLFEITNVKQKKKTHCGV 71
Query: 72 LEFVADEGKVYLPYW 86
LEFVADEG VYLPYW
Sbjct: 72 LEFVADEGVVYLPYW 86
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-YPMLFKLTNQKMGRITHSGV 143
Y + VS +R +E G K+I+PPSAL++LTR I +PMLF++TN K + TH GV
Sbjct: 15 YRVYPVSFI---DRPQLENGDKVILPPSALDRLTRAGIDEFPMLFEITNVKQKKKTHCGV 71
Query: 144 LEL 146
LE
Sbjct: 72 LEF 74
>gi|403216223|emb|CCK70720.1| hypothetical protein KNAG_0F00510 [Kazachstania naganishii CBS
8797]
Length = 339
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 158/274 (57%), Gaps = 26/274 (9%)
Query: 210 FNRSYKCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F + ++C+ V+M P R+D GGK+ +PPSAL +L+ LN+ YPMLF+ Q+ R+T
Sbjct: 14 FEQLFRCYPVAMMPEGVRKDGANYGGKVFLPPSALNRLSLLNVSYPMLFEFVAQESERVT 73
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
+ GVLEFVA+EG+VYLP WMM L + G ++ + S +P+ F K +PQ+ DFLDI++P
Sbjct: 74 YGGVLEFVAEEGRVYLPQWMMETLEVQPGSVLRVRSAEVPLGKFVKLEPQSVDFLDISDP 133
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT GD++ I+YN +Y + +LE +P +++ ++E D+ DFAPPV
Sbjct: 134 KAVLENALRTFSTLTVGDIVEISYNEAVYRIKILEVEPDSTSHSICVVETDLVTDFAPPV 193
Query: 386 GYTEPE-------------------KVKEKEEDNMIDPVD-LMPEPSGFVAFHGTGNRLD 425
GY EPE K+K N I+ +M F G G+++
Sbjct: 194 GYVEPEPQQRADQAQKKGPRGGDTSKLKVGSMGNRIEYAKTVMTSSQSTNRFQGEGSKVS 253
Query: 426 GKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTL 459
GK+ + + +G T + D+EP L
Sbjct: 254 GKKAAESS--SGATGALLDVDLNSISLDHEPRRL 285
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F + ++C+ V+M P R+D GGK+ +PPSAL +L+ LN+ YPMLF+ Q+ R+T
Sbjct: 14 FEQLFRCYPVAMMPEGVRKDGANYGGKVFLPPSALNRLSLLNVSYPMLFEFVAQESERVT 73
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
+ GVLEFVA+EG+VYLP W ++ + PG+
Sbjct: 74 YGGVLEFVAEEGRVYLPQWMMETLEVQPGS 103
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNERED-VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ V+M P R+D GGK+ +PPSAL +L+ LN+ YPMLF+ Q+ R+T+ GV
Sbjct: 18 FRCYPVAMMPEGVRKDGANYGGKVFLPPSALNRLSLLNVSYPMLFEFVAQESERVTYGGV 77
Query: 144 LEL 146
LE
Sbjct: 78 LEF 80
>gi|342881879|gb|EGU82664.1| hypothetical protein FOXB_06816 [Fusarium oxysporum Fo5176]
Length = 380
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 200 FNMFPDIPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+NM RP F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+
Sbjct: 18 YNMARHGRRPIVQRFDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPL 77
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
L +L N + GR +H+GVLEF+A+EG+ Y+P WMM L +D G+++ + + SL +A K
Sbjct: 78 LMELINGEKGRHSHAGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQVRTTSLELAKMVKL 137
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
QPQ+ +FL+I++PKAVLE RNFA LT GD+ YN ++Y++ VL+ KP V++
Sbjct: 138 QPQSVNFLEISDPKAVLEKAFRNFATLTKGDVFNFAYNDEVYDVAVLDVKPETDKMGVSM 197
Query: 373 IECDMNVDFAPPVGYTEPEK 392
IE D++V+FAPPVGY EPE+
Sbjct: 198 IETDVSVEFAPPVGYVEPER 217
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H
Sbjct: 32 FDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 91
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 92 AGVLEFIAEEGRAYIPQWMM 111
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG ER ++ G KII+PPSAL+++++L++ +P+L +L N + GR +H+GVL
Sbjct: 36 YRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|149248356|ref|XP_001528565.1| ubiquitin fusion degradation protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146448519|gb|EDK42907.1| ubiquitin fusion degradation protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 365
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 12/206 (5%)
Query: 198 FGFNMF----PDIPRPFNRSY----KCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTR 248
FG +MF P P N + +C+ VSM P R +D GGKI +PPSAL++LT
Sbjct: 5 FGSSMFGGGVPGFGMPMNNKFEEYFRCYPVSMMPDMIRKDDANYGGKIFLPPSALQKLTM 64
Query: 249 LNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLP 308
L+I YP+LF+L N++ THSGVLEF+A+EG+ Y+P WMM L L G LV I + L
Sbjct: 65 LHIRYPILFELKNEQQDITTHSGVLEFIAEEGRCYIPQWMMNTLQLQPGSLVKINNCDLE 124
Query: 309 VATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-- 366
+ F K +PQ+ DFLDI++PKAVLEN LR F+ LT D+I INYN +Y + VLE KP
Sbjct: 125 LGKFVKIEPQSVDFLDISDPKAVLENVLRKFSTLTVNDVIEINYNDSVYGIKVLEVKPES 184
Query: 367 -GNAVTIIECDMNVDFAPPVGYTEPE 391
G+ + ++E D+ DFAPPVGY EPE
Sbjct: 185 SGHGICVVETDLETDFAPPVGYVEPE 210
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 10/146 (6%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ VSM P R +D GGKI +PPSAL++LT L+I YP+LF+L N++ T
Sbjct: 25 FEEYFRCYPVSMMPDMIRKDDANYGGKIFLPPSALQKLTMLHIRYPILFELKNEQQDITT 84
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGNERE----DVERGGKIIMPPSALEQLTRLNI 122
HSGVLEF+A+EG+ Y+P W ++ + PG+ + D+E G + + P +++ L+I
Sbjct: 85 HSGVLEFIAEEGRCYIPQWMMNTLQLQPGSLVKINNCDLELGKFVKIEPQSVD---FLDI 141
Query: 123 CYP-MLFKLTNQKMGRITHSGVLELD 147
P + + +K +T + V+E++
Sbjct: 142 SDPKAVLENVLRKFSTLTVNDVIEIN 167
>gi|392595761|gb|EIW85084.1| UFD1-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 462
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 134/203 (66%), Gaps = 2/203 (0%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ K +SV+M PG ERE+V GGKIIMPPSAL LT L++ P +F+L N
Sbjct: 38 PRSYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALANLTNLDLESPWMFQLRNPSNPA 97
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ V I L F K Q Q F+++
Sbjct: 98 ASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPVRITGTELQKGKFIKLQAQEPQFVEV 157
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPP 384
++PKAVLE LRNF+ LT GD++ I+YNS ++ L V+ET P G +++++ D+ VDFA P
Sbjct: 158 SDPKAVLEQALRNFSALTQGDIVEISYNSMVFGLLVMETNPGGGGISVLDTDLEVDFATP 217
Query: 385 VGYTEPEKVKEKEEDNMIDPVDL 407
GY EPE+ K M +++
Sbjct: 218 KGYVEPERPKAAPPSTMASKLNI 240
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ K +SV+M PG ERE+V GGKIIMPPSAL LT L++ P +F+L N
Sbjct: 38 PRSYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALANLTNLDLESPWMFQLRNPSNPA 97
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LPYW
Sbjct: 98 ASTHAGVLEFIAEEGVVHLPYWMM 121
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M PG ERE+V GGKIIMPPSAL LT L++ P +F+L N TH+GVLE
Sbjct: 47 AYSVAMLPGRERENVSYGGKIIMPPSALANLTNLDLESPWMFQLRNPSNPAASTHAGVLE 106
Query: 146 L 146
Sbjct: 107 F 107
>gi|302412503|ref|XP_003004084.1| ubiquitin fusion degradation protein [Verticillium albo-atrum
VaMs.102]
gi|261356660|gb|EEY19088.1| ubiquitin fusion degradation protein [Verticillium albo-atrum
VaMs.102]
Length = 374
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 140/202 (69%), Gaps = 5/202 (2%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+QF I + F+ Y+C+ + PG ER D+ G KI +PPSAL+++++L++ +P+
Sbjct: 2 YQFSRGGRRPIVQRFDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPL 61
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYW--MMRNLLLDEGELVNIESVSLPVATFS 313
+ ++ N + G+ +H+GVLEFVA+EGK YLP W MM+ L LD G+L+ I++ SL +A
Sbjct: 62 IMEIINGEKGKHSHAGVLEFVAEEGKAYLPQWLQMMQTLGLDVGDLIQIKTTSLELARHV 121
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AV 370
K QPQ+ +FLDI++PKAVLE RNFA LT GD+ +YN ++Y++ VLE KP V
Sbjct: 122 KLQPQSVNFLDISDPKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLEVKPETDKMGV 181
Query: 371 TIIECDMNVDFAPPVGYTEPEK 392
++IE D+ VDFAPPVGY EPE+
Sbjct: 182 SMIETDVEVDFAPPVGYVEPER 203
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 58/79 (73%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + PG ER D+ G KI +PPSAL+++++L++ +P++ ++ N + G+ +H
Sbjct: 16 FDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSH 75
Query: 69 SGVLEFVADEGKVYLPYWC 87
+GVLEFVA+EGK YLP W
Sbjct: 76 AGVLEFVAEEGKAYLPQWL 94
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + PG ER D+ G KI +PPSAL+++++L++ +P++ ++ N + G+ +H+GVL
Sbjct: 20 YRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSHAGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|50554015|ref|XP_504416.1| YALI0E26235p [Yarrowia lipolytica]
gi|49650285|emb|CAG80017.1| YALI0E26235p [Yarrowia lipolytica CLIB122]
Length = 374
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 134/198 (67%), Gaps = 4/198 (2%)
Query: 197 QFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
Q+G F + + F Y+C+ ++M PG +RE GGKI +PPSAL +L+ L+I YPML
Sbjct: 7 QWGATPFRNRTQKFQDYYRCYPIAMMPGKDRESANYGGKIFLPPSALSKLSMLHISYPML 66
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F+L +++ +T+ GVLEF+A+EG+VYLP W++ L + G L+ I S LP+ F KF+
Sbjct: 67 FQLKSEENDNVTYGGVLEFIAEEGRVYLPQWIIETLDVGPGSLLEISSCDLPLGKFVKFE 126
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG----NAVTI 372
PQ+ DFLDI++P+AVLE +NF+ LT GD+ +YN K Y + VLE KP ++V
Sbjct: 127 PQSVDFLDISDPRAVLERSFQNFSTLTVGDVFKFSYNDKTYGMKVLEVKPDLEDKHSVCC 186
Query: 373 IECDMNVDFAPPVGYTEP 390
+E D+ VDFAPPVGY +P
Sbjct: 187 VETDIEVDFAPPVGYVDP 204
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y+C+ ++M PG +RE GGKI +PPSAL +L+ L+I YPMLF+L +++ +T+
Sbjct: 20 FQDYYRCYPIAMMPGKDRESANYGGKIFLPPSALSKLSMLHISYPMLFQLKSEENDNVTY 79
Query: 69 SGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
GVLEF+A+EG+VYLP W ++ + PG+
Sbjct: 80 GGVLEFIAEEGRVYLPQWIIETLDVGPGS 108
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ ++M PG +RE GGKI +PPSAL +L+ L+I YPMLF+L +++ +T+ GVL
Sbjct: 24 YRCYPIAMMPGKDRESANYGGKIFLPPSALSKLSMLHISYPMLFQLKSEENDNVTYGGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|346975299|gb|EGY18751.1| ubiquitin fusion degradation protein [Verticillium dahliae VdLs.17]
Length = 374
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 135/188 (71%), Gaps = 5/188 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + PG ER D+ G KI +PPSAL+++++L++ +P++ ++ N + G+ +H
Sbjct: 16 FDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSH 75
Query: 270 SGVLEFVADEGKVYLPYW--MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
+GVLEFVA+EGK YLP W MM+ L LD G+L+ I++ SL +A K QPQ+ +FLDI++
Sbjct: 76 AGVLEFVAEEGKAYLPQWLQMMQTLGLDVGDLIQIKTTSLELARHVKLQPQSVNFLDISD 135
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPP 384
PKAVLE RNFA LT GD+ +YN ++Y++ VLE KP V++IE D+ VDFAPP
Sbjct: 136 PKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLEVKPETDKMGVSMIETDVEVDFAPP 195
Query: 385 VGYTEPEK 392
VGY EPE+
Sbjct: 196 VGYVEPER 203
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 58/79 (73%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + PG ER D+ G KI +PPSAL+++++L++ +P++ ++ N + G+ +H
Sbjct: 16 FDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSH 75
Query: 69 SGVLEFVADEGKVYLPYWC 87
+GVLEFVA+EGK YLP W
Sbjct: 76 AGVLEFVAEEGKAYLPQWL 94
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + PG ER D+ G KI +PPSAL+++++L++ +P++ ++ N + G+ +H+GVL
Sbjct: 20 YRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSHAGVL 79
Query: 145 EL 146
E
Sbjct: 80 EF 81
>gi|367012423|ref|XP_003680712.1| hypothetical protein TDEL_0C06120 [Torulaspora delbrueckii]
gi|359748371|emb|CCE91501.1| hypothetical protein TDEL_0C06120 [Torulaspora delbrueckii]
Length = 356
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 152/261 (58%), Gaps = 33/261 (12%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
+ ++P+ F ++C+ V+M N+R +D GGKI +P SAL +LT LNI YPMLF+L
Sbjct: 12 YANLPQKFEDFFRCYPVAMM--NDRIRKDDANYGGKIFLPTSALNKLTMLNIRYPMLFEL 69
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
T + GR+TH GVLEF+A+EG+ YLP WM+ L + G L+ I S +P+ F K +PQ+
Sbjct: 70 TANENGRVTHCGVLEFIAEEGRAYLPQWMLETLGVQPGSLLKIGSTDVPLGQFVKLEPQS 129
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECD 376
DFLDI++PKAVLEN LR F+ LT D+I I+YN K Y++ +LE K P + +IE D
Sbjct: 130 VDFLDISDPKAVLENVLRKFSTLTIEDIIEISYNEKTYKIKILEVKPESPSKGICVIETD 189
Query: 377 MNVDFAPPVGYTEPE---------------------KVKEKEEDNMIDPVD----LMPEP 411
+ +FAPPVGY EP+ + + +M +D L
Sbjct: 190 LVTEFAPPVGYVEPDYQALQQKELEEKQKKKREGKFDLSAHQNGSMARRIDYVAKLKETN 249
Query: 412 SGFVAFHGTGNRLDGKRKKKD 432
+G AF G G L GK KK+
Sbjct: 250 AGTTAFSGEGQTLSGKSNKKN 270
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
+ ++P+ F ++C+ V+M N+R +D GGKI +P SAL +LT LNI YPMLF+L
Sbjct: 12 YANLPQKFEDFFRCYPVAMM--NDRIRKDDANYGGKIFLPTSALNKLTMLNIRYPMLFEL 69
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
T + GR+TH GVLEF+A+EG+ YLP W ++ + PG+
Sbjct: 70 TANENGRVTHCGVLEFIAEEGRAYLPQWMLETLGVQPGS 108
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 85 YWCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
+ C+ V+M N+R +D GGKI +P SAL +LT LNI YPMLF+LT + GR+TH
Sbjct: 23 FRCYPVAMM--NDRIRKDDANYGGKIFLPTSALNKLTMLNIRYPMLFELTANENGRVTHC 80
Query: 142 GVLEL 146
GVLE
Sbjct: 81 GVLEF 85
>gi|358399671|gb|EHK49008.1| hypothetical protein TRIATDRAFT_297743 [Trichoderma atroviride IMI
206040]
Length = 368
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 142/206 (68%), Gaps = 12/206 (5%)
Query: 198 FGFNMF--------PDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL 249
FGF+ + P I R F+ Y+C+ V M PG+ER ++ G KII+PPSAL+++++L
Sbjct: 4 FGFDPYGMARHGRRPIIQR-FDEYYRCYPVIMAPGSERPELNYGSKIILPPSALDKVSKL 62
Query: 250 NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPV 309
++ +P+L ++ N + G+ +H+GVLEF+A+EG+ Y+P WMM L LD G+++ I + SL +
Sbjct: 63 HVQWPLLMEMINGEKGKHSHAGVLEFIAEEGRAYIPQWMMVTLGLDVGDMIQIRTTSLEL 122
Query: 310 ATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN- 368
A K QPQ+ +FL+I++PKAVLE RNFA LT GD+ YN +Y++ VL+ KP
Sbjct: 123 ARMVKLQPQSVNFLEISDPKAVLEKAFRNFATLTKGDIFNFEYNDDVYDVAVLDVKPETD 182
Query: 369 --AVTIIECDMNVDFAPPVGYTEPEK 392
V++IE D++V+FA PVGY EPEK
Sbjct: 183 KMGVSMIETDVSVEFAAPVGYVEPEK 208
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 61/80 (76%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ V M PG+ER ++ G KII+PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 23 FDEYYRCYPVIMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSH 82
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 83 AGVLEFIAEEGRAYIPQWMM 102
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ V M PG+ER ++ G KII+PPSAL+++++L++ +P+L ++ N + G+ +H+GVL
Sbjct: 27 YRCYPVIMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSHAGVL 86
Query: 145 EL 146
E
Sbjct: 87 EF 88
>gi|358386877|gb|EHK24472.1| hypothetical protein TRIVIDRAFT_71825 [Trichoderma virens Gv29-8]
Length = 376
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 135/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 29 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSH 88
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG+ Y+P WMM L LD G+++ I + SL +A K QPQ+ +FLDI++PK
Sbjct: 89 AGVLEFIAEEGRAYIPQWMMVTLGLDVGDMIQIRTTSLELARMVKLQPQSVNFLDISDPK 148
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN ++YE+ VL+ KP V++IE D++V+FA PVG
Sbjct: 149 AVLEKAFRNFATLTKGDIFNFEYNDEVYEVAVLDVKPETEKMGVSMIETDVSVEFAAPVG 208
Query: 387 YTEPEK 392
Y EPE+
Sbjct: 209 YVEPER 214
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 61/80 (76%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L ++ N + G+ +H
Sbjct: 29 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSH 88
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 89 AGVLEFIAEEGRAYIPQWMM 108
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L ++ N + G+ +H+GVL
Sbjct: 33 YRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSHAGVL 92
Query: 145 EL 146
E
Sbjct: 93 EF 94
>gi|320585930|gb|EFW98609.1| ubiquitin fusion degradation protein [Grosmannia clavigera kw1407]
Length = 380
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG+ER ++ G KI++PPSAL++++RL++ +P+L +L N + G+ +H
Sbjct: 25 FDEFYRCYPMVMAPGSERPELNYGSKILLPPSALDKVSRLHVQWPLLMELVNAEKGKHSH 84
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEFVA+EG+ YLP WMM L LD G+++ I++ SL +A K QPQ+ FL+I++PK
Sbjct: 85 CGVLEFVAEEGRAYLPQWMMETLRLDVGDMIQIKTTSLELARMVKLQPQSPAFLEISDPK 144
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN +Y + VLE KP + V+++E D++V+F PVG
Sbjct: 145 AVLERAFRNFASLTKGDIFNFEYNGDVYGVAVLEVKPESEKMGVSMLETDVSVEFEAPVG 204
Query: 387 YTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGT 420
Y EPE+VK P + + P G + GT
Sbjct: 205 YVEPERVK---GSGTGTPRNGLAPPGGVLHNQGT 235
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 60/78 (76%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG+ER ++ G KI++PPSAL++++RL++ +P+L +L N + G+ +H
Sbjct: 25 FDEFYRCYPMVMAPGSERPELNYGSKILLPPSALDKVSRLHVQWPLLMELVNAEKGKHSH 84
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEFVA+EG+ YLP W
Sbjct: 85 CGVLEFVAEEGRAYLPQW 102
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG+ER ++ G KI++PPSAL++++RL++ +P+L +L N + G+ +H GVL
Sbjct: 29 YRCYPMVMAPGSERPELNYGSKILLPPSALDKVSRLHVQWPLLMELVNAEKGKHSHCGVL 88
Query: 145 EL 146
E
Sbjct: 89 EF 90
>gi|408399732|gb|EKJ78825.1| hypothetical protein FPSE_00968 [Fusarium pseudograminearum CS3096]
Length = 380
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 141/200 (70%), Gaps = 7/200 (3%)
Query: 200 FNMFPDIPRP----FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
+NM RP F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+
Sbjct: 18 YNMARHGRRPIVQRFDEYYRCYPLVMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPL 77
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
L +L N + G +H+GVLEF+A+EG+ Y+P WMM L +D G+++ I + SL +A K
Sbjct: 78 LMELINGEKGLHSHAGVLEFIAEEGRAYIPQWMMVTLGMDVGDMIQIRTTSLELAKMVKL 137
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTI 372
QPQ+ +FL+I++PKAVLE RNFA LT GD+ +YN ++Y++ VL+ KP V++
Sbjct: 138 QPQSVNFLEISDPKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLDVKPETDKMGVSM 197
Query: 373 IECDMNVDFAPPVGYTEPEK 392
IE D++V+FAPPVGY EPE+
Sbjct: 198 IETDVSVEFAPPVGYVEPER 217
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 60/80 (75%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L +L N + G +H
Sbjct: 32 FDEYYRCYPLVMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGLHSH 91
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 92 AGVLEFIAEEGRAYIPQWMM 111
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L +L N + G +H+GVL
Sbjct: 36 YRCYPLVMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGLHSHAGVL 95
Query: 145 EL 146
E
Sbjct: 96 EF 97
>gi|389748667|gb|EIM89844.1| ubiquitin fusion degradation protein I [Stereum hirsutum FP-91666
SS1]
Length = 464
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 125/183 (68%), Gaps = 2/183 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
P ++ K +SV+M PG ERE+V GGKIIMPPSAL LT L++ P +FKL N
Sbjct: 29 PSAYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALAHLTSLDLDSPWMFKLRNPANPA 88
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I +P F K Q Q FL+I
Sbjct: 89 ASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTEVPKGKFVKLQAQHVHFLEI 148
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNVDFAPP 384
++PKAVLE LRNF CLT GD+I I+YNS ++ L V+E PG +++++ D+ VDFA P
Sbjct: 149 SDPKAVLEQALRNFTCLTQGDIIEISYNSIVFGLLVMEASPGGEGISVLDTDLEVDFAAP 208
Query: 385 VGY 387
VGY
Sbjct: 209 VGY 211
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
P ++ K +SV+M PG ERE+V GGKIIMPPSAL LT L++ P +FKL N
Sbjct: 29 PSAYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALAHLTSLDLDSPWMFKLRNPANPA 88
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LPYW
Sbjct: 89 ASTHAGVLEFIAEEGVVHLPYWMM 112
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M PG ERE+V GGKIIMPPSAL LT L++ P +FKL N TH+GVLE
Sbjct: 38 AYSVAMLPGRERENVSYGGKIIMPPSALAHLTSLDLDSPWMFKLRNPANPAASTHAGVLE 97
Query: 146 L 146
Sbjct: 98 F 98
>gi|256078326|ref|XP_002575447.1| ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 286
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 137/192 (71%), Gaps = 18/192 (9%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
M++NL L+EG LV++ + +LPVA+F++FQPQ+ DFLDI+NPKAVLEN LR+FACLT GD+
Sbjct: 1 MLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPKAVLENALRDFACLTVGDI 60
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY----------TEPEKVKEKE 397
IAINYN +IYEL VLETKP +AVTIIECDM+VDFAPPVGY + + + E
Sbjct: 61 IAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQPTDSSSSSKQSDKDLHQIE 120
Query: 398 EDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK--KKDTVETGGTPTK-REYQRGIPHYDY 454
ED I V GF AF GTG RLDGK K K D + G + + +E +RG+P+Y+Y
Sbjct: 121 EDIKIPSV-----VQGFQAFSGTGYRLDGKNKQDKTDEADNGQSLGQLKERERGVPNYNY 175
Query: 455 EPNTLVFLRNIK 466
+P +L F RN+K
Sbjct: 176 QPGSLTFFRNVK 187
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 146 LDGKRK--KKDTVETGGTPTK-REYQRGIPHYDYEPNTLVFLRNIK 188
LDGK K K D + G + + +E +RG+P+Y+Y+P +L F RN+K
Sbjct: 142 LDGKNKQDKTDEADNGQSLGQLKERERGVPNYNYQPGSLTFFRNVK 187
>gi|68481468|ref|XP_715373.1| hypothetical protein CaO19.5833 [Candida albicans SC5314]
gi|68481599|ref|XP_715308.1| hypothetical protein CaO19.13255 [Candida albicans SC5314]
gi|46436925|gb|EAK96280.1| hypothetical protein CaO19.13255 [Candida albicans SC5314]
gi|46436993|gb|EAK96347.1| hypothetical protein CaO19.5833 [Candida albicans SC5314]
Length = 363
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 151/259 (58%), Gaps = 26/259 (10%)
Query: 198 FGFNMFPDIPRPFNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + FP F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPML
Sbjct: 14 FGSSGFPS--NKFEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPML 71
Query: 257 FKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
F++ N++ ++THSGVLEF+A+EG+ YLP WMM L L G L+ I + L + F K +
Sbjct: 72 FEIKNEQNEKLTHSGVLEFIAEEGRTYLPQWMMNTLELTPGSLIKITNCDLNLGKFVKIE 131
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTII 373
PQ+ DFLDI++PKAVLEN LR F+ LT D+I +NYN IY + VLE KP + + ++
Sbjct: 132 PQSVDFLDISDPKAVLENVLRKFSTLTVNDIIEVNYNDAIYGIRVLEVKPDSTSKGICVV 191
Query: 374 ECDMNVDFAPPVGYTEPE-KVKEKEEDNM-IDP------------------VDLMPEPSG 413
E D+ DFAP VGY EPE K K E + IDP L+ E
Sbjct: 192 ETDLETDFAPLVGYVEPEYKPKTVEPSSKPIDPSKVNKSAGAATMAKSINYAKLVAEAGK 251
Query: 414 FVAFHGTGNRLDGKRKKKD 432
F G+G +L GK D
Sbjct: 252 TTKFSGSGQKLSGKSIDMD 270
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
HSGVLEF+A+EG+ YLP W ++ + PG+
Sbjct: 84 HSGVLEFIAEEGRTYLPQWMMNTLELTPGS 113
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF++ N++ ++THSGV
Sbjct: 28 FRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLTHSGV 87
Query: 144 LEL 146
LE
Sbjct: 88 LEF 90
>gi|452821147|gb|EME28181.1| ubiquitin fusion degradation protein [Galdieria sulphuraria]
Length = 335
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 134/183 (73%), Gaps = 4/183 (2%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
FP F R+ + + VS ++ +E G KI++PPSAL+ LT++ + YPMLF+L +
Sbjct: 19 FPIPSGSFQRNLRAYPVSFI---DKPQLENGDKIVLPPSALDALTQMQVSYPMLFQLES- 74
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
GR+TH GV+EF+A+EG YLPYWMM+N+ + EGEL+ I + +LP TF K +PQ+ +F
Sbjct: 75 SAGRVTHCGVMEFIAEEGFAYLPYWMMQNMAVGEGELIKIRNANLPKGTFVKLRPQSSEF 134
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFA 382
L I++PKAVLE LRNF+CLT GD IAI+Y ++IY + +L+ +PG+A++II+ D+NV+FA
Sbjct: 135 LAISDPKAVLEARLRNFSCLTQGDTIAIHYLNRIYWIDILQVQPGDAISIIDADVNVEFA 194
Query: 383 PPV 385
PP
Sbjct: 195 PPA 197
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
FP F R+ + + VS ++ +E G KI++PPSAL+ LT++ + YPMLF+L +
Sbjct: 19 FPIPSGSFQRNLRAYPVSFI---DKPQLENGDKIVLPPSALDALTQMQVSYPMLFQLES- 74
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
GR+TH GV+EF+A+EG YLPYW
Sbjct: 75 SAGRVTHCGVMEFIAEEGFAYLPYW 99
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
++ +E G KI++PPSAL+ LT++ + YPMLF+L + GR+TH GV+E
Sbjct: 39 DKPQLENGDKIVLPPSALDALTQMQVSYPMLFQLES-SAGRVTHCGVMEF 87
>gi|325183700|emb|CCA18159.1| ubiquitin fusion degradation protein putative [Albugo laibachii
Nc14]
Length = 317
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F N+ + P+ F+ ++ +S+S ++ +E G KI++PPSALE L RL+I YPM
Sbjct: 11 FGLNINLGGNFPQKFDEHFRVYSMSFC---DKGHLEDGDKILLPPSALEVLARLHIEYPM 67
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
LFK+TN+ + R +H GVLEF A EG Y+PYWMM+NL ++EG+++N++++SLP ATF K
Sbjct: 68 LFKVTNEGVNRYSHCGVLEFSATEGSCYMPYWMMQNLFINEGDIINVQNISLPKATFVKI 127
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIEC 375
+PQ+ +FLDI+NP+AVLE LR F+C+T GD I + YN+K + L V E KP +A IIE
Sbjct: 128 RPQSKEFLDISNPRAVLEASLRKFSCMTVGDTICLKYNNKNFLLDVREVKPSSAACIIET 187
Query: 376 DMNVDFAPPVGY 387
D VDF P Y
Sbjct: 188 DCEVDFELPADY 199
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
+ P+ F+ ++ +S+S ++ +E G KI++PPSALE L RL+I YPMLFK+TN+ +
Sbjct: 20 NFPQKFDEHFRVYSMSFC---DKGHLEDGDKILLPPSALEVLARLHIEYPMLFKVTNEGV 76
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
R +H GVLEF A EG Y+PYW
Sbjct: 77 NRYSHCGVLEFSATEGSCYMPYW 99
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 97 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ +E G KI++PPSALE L RL+I YPMLFK+TN+ + R +H GVLE
Sbjct: 38 DKGHLEDGDKILLPPSALEVLARLHIEYPMLFKVTNEGVNRYSHCGVLEFSA 89
>gi|340522604|gb|EGR52837.1| predicted protein [Trichoderma reesei QM6a]
Length = 372
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 134/186 (72%), Gaps = 3/186 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L +L N + G+ +H
Sbjct: 28 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSH 87
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG+ Y+P WMM L LD G+++ I + SL +A K QPQ+ +FL+I++PK
Sbjct: 88 AGVLEFIAEEGRAYIPQWMMETLGLDVGDMIQIRTTSLELARMVKLQPQSVNFLEISDPK 147
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVG 386
AVLE RNFA LT GD+ YN ++Y + VL+ KP V++IE D++V+FA PVG
Sbjct: 148 AVLEKAFRNFATLTKGDIFNFEYNDEVYHVAVLDVKPETEKMGVSMIETDVSVEFAAPVG 207
Query: 387 YTEPEK 392
Y EPE+
Sbjct: 208 YVEPER 213
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 61/80 (76%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ Y+C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L +L N + G+ +H
Sbjct: 28 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSH 87
Query: 69 SGVLEFVADEGKVYLPYWCF 88
+GVLEF+A+EG+ Y+P W
Sbjct: 88 AGVLEFIAEEGRAYIPQWMM 107
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 47/62 (75%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ + M PG+ER ++ G KII+PPSAL+++++L++ +P+L +L N + G+ +H+GVL
Sbjct: 32 YRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSHAGVL 91
Query: 145 EL 146
E
Sbjct: 92 EF 93
>gi|71014501|ref|XP_758719.1| hypothetical protein UM02572.1 [Ustilago maydis 521]
gi|46098509|gb|EAK83742.1| hypothetical protein UM02572.1 [Ustilago maydis 521]
Length = 426
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--T 260
FP PR ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 23 FPRPPRAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRTT 82
Query: 261 NQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
R TH+GVLEF+ADEG V+LP WMMR L L EG+ + + +LP K QPQT
Sbjct: 83 GASEVRRTHAGVLEFIADEGHVHLPAWMMRTLGLSEGDPIRLTGATLPKGKMVKIQPQTV 142
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNV 379
DFL+I++PKAVLE RNF+ LT GD++ I+YN +E+ ++E P + ++IIE D+ V
Sbjct: 143 DFLEISDPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPDADGISIIETDLEV 202
Query: 380 DFAPPVGYTE 389
DFA P GY E
Sbjct: 203 DFAAPKGYVE 212
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--T 59
FP PR ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 23 FPRPPRAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRTT 82
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYWCF 88
R TH+GVLEF+ADEG V+LP W
Sbjct: 83 GASEVRRTHAGVLEFIADEGHVHLPAWMM 111
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--TNQKMG 136
+ Y Y+ +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 28 RAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRTTGASEV 87
Query: 137 RITHSGVLEL 146
R TH+GVLE
Sbjct: 88 RRTHAGVLEF 97
>gi|443894545|dbj|GAC71893.1| ubiquitin fusion-degradation protein [Pseudozyma antarctica T-34]
Length = 427
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 128/195 (65%), Gaps = 6/195 (3%)
Query: 201 NMFPDIPRP---FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
M P PRP ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F
Sbjct: 21 GMDPRFPRPARAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFF 80
Query: 258 KL--TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
+L T R TH+GVLEF+ADEG V+LP WMMR L L EG+ + + +LP K
Sbjct: 81 ELRSTGASEVRRTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGATLPKGKMVKI 140
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIE 374
QPQT DFL+I++PKAVLE RNF+ LT GD++ I+YN +E+ ++E P + ++IIE
Sbjct: 141 QPQTVDFLEISDPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPNADGISIIE 200
Query: 375 CDMNVDFAPPVGYTE 389
D+ VDFAPP GY E
Sbjct: 201 TDLEVDFAPPKGYVE 215
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 1 MFPDIPRP---FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFK 57
M P PRP ++ +K +S++M PG ER +V GGKIIMPPSAL LT L I P F+
Sbjct: 22 MDPRFPRPARAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFE 81
Query: 58 L--TNQKMGRITHSGVLEFVADEGKVYLPYW 86
L T R TH+GVLEF+ADEG V+LP W
Sbjct: 82 LRSTGASEVRRTHAGVLEFIADEGNVHLPAW 112
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--TNQKMG 136
+ Y Y+ +S++M PG ER +V GGKIIMPPSAL LT L I P F+L T
Sbjct: 31 RAYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSTGASEV 90
Query: 137 RITHSGVLEL 146
R TH+GVLE
Sbjct: 91 RRTHAGVLEF 100
>gi|388853609|emb|CCF52781.1| related to UFD1-ubiquitin fusion degradation protein [Ustilago
hordei]
Length = 428
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
FP PR ++ +K +S++M P ER +V GGKIIMPPSAL LT L I P F+L +
Sbjct: 26 FPRPPRAYDEYFKAYSMAMLPSKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSA 85
Query: 263 KMGRI--THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
+ + TH+GVLEF+ADEG V+LP WMMR L L EG+ + + +LP K QPQT
Sbjct: 86 GVSEVRRTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGTTLPKGKMVKIQPQTV 145
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNV 379
DFL+I++PKAVLE RNF+ LT GD++ I+YN +E+ ++E P + ++IIE D+ V
Sbjct: 146 DFLEISDPKAVLEQAFRNFSSLTPGDIVEISYNCLTFEILIMEITPNADGISIIETDLEV 205
Query: 380 DFAPPVGYTE 389
DFAPP GY E
Sbjct: 206 DFAPPKGYVE 215
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
FP PR ++ +K +S++M P ER +V GGKIIMPPSAL LT L I P F+L +
Sbjct: 26 FPRPPRAYDEYFKAYSMAMLPSKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSA 85
Query: 62 KMGRI--THSGVLEFVADEGKVYLPYWCF 88
+ + TH+GVLEF+ADEG V+LP W
Sbjct: 86 GVSEVRRTHAGVLEFIADEGNVHLPAWMM 114
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 138
+ Y Y+ +S++M P ER +V GGKIIMPPSAL LT L I P F+L + + +
Sbjct: 31 RAYDEYFKAYSMAMLPSKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSAGVSEV 90
Query: 139 --THSGVLEL 146
TH+GVLE
Sbjct: 91 RRTHAGVLEF 100
>gi|344303157|gb|EGW33431.1| hypothetical protein SPAPADRAFT_60790 [Spathaspora passalidarum
NRRL Y-27907]
Length = 352
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G T
Sbjct: 20 FEEFFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNESAGVTT 79
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEFVA+EG+ Y+P WMM L L+ G L+ I + L + F K +PQ+ DFLDI++P
Sbjct: 80 HSGVLEFVAEEGRCYIPQWMMATLKLNPGSLIKISNCDLQLGKFVKIEPQSVDFLDISDP 139
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
+AVLEN LR F+ LT D+I INYN IY + VLE KP + ++E D+ DFAPPV
Sbjct: 140 RAVLENVLRKFSTLTVNDIIEINYNDSIYGIKVLEVKPDTDSQGICVVETDLETDFAPPV 199
Query: 386 GYTEPE 391
GY EPE
Sbjct: 200 GYVEPE 205
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G T
Sbjct: 20 FEEFFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNESAGVTT 79
Query: 68 HSGVLEFVADEGKVYLPYWCFS-VSMFPGN 96
HSGVLEFVA+EG+ Y+P W + + + PG+
Sbjct: 80 HSGVLEFVAEEGRCYIPQWMMATLKLNPGS 109
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N+ G THSGV
Sbjct: 24 FRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNESAGVTTHSGV 83
Query: 144 LEL 146
LE
Sbjct: 84 LEF 86
>gi|401408851|ref|XP_003883874.1| Ubiquitin fusion-degradation protein (ISS),related [Neospora
caninum Liverpool]
gi|325118291|emb|CBZ53842.1| Ubiquitin fusion-degradation protein (ISS),related [Neospora
caninum Liverpool]
Length = 340
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 166/290 (57%), Gaps = 37/290 (12%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y CF VS F G ++D+E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVS-FIG--KDDMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEF+A+EG + PYWMM+NL L+EG++V + ++SLP TF + QP T +FL I+NP+
Sbjct: 80 TGVLEFIAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVQLQPVTTEFLQISNPR 139
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LR +A LT GD+I + + K ++L V + +P AV+IIE DM V+F P GY E
Sbjct: 140 AVLEVALRGYAALTVGDLIYLPFLDKNFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVE 199
Query: 390 P------------EKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK---------- 427
P + +KE D + S V F G G RLDGK
Sbjct: 200 PTSRGTQDASEDADMSSDKEASETDQTAD--SDSSQRVLFSGKGTRLDGKAVRPTPESSP 257
Query: 428 RKKKDTVETGGTPTKREYQRGIPHYDYEPNTLV-------FLRNIKPASA 470
KK+D E P K + + G+ E + LV F+ + P +A
Sbjct: 258 AKKEDESE---EPWKSQLRNGVRTSCGEYDELVREGRIPGFIGKVTPGAA 304
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y CF VS F G ++D+E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVS-FIG--KDDMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQL 117
+GVLEF+A+EG + PYW G E D+ R I +P QL
Sbjct: 80 TGVLEFIAEEGTCHFPYWMMQNL---GLEEGDIVRVRNISLPKGTFVQL 125
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF VS F G ++D+E+G KI++P SAL L RL+I +PMLF++ N+ R TH+GVL
Sbjct: 27 YSCFPVS-FIG--KDDMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHTGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|156321338|ref|XP_001618253.1| hypothetical protein NEMVEDRAFT_v1g77672 [Nematostella vectensis]
gi|156198205|gb|EDO26153.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 107/120 (89%)
Query: 236 IIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD 295
+IMPPSAL+QL+ LNI YPMLFKLTN ++ R TH GVLEFVADEGK+YLP+WMMRN+LLD
Sbjct: 1 VIMPPSALDQLSMLNIVYPMLFKLTNNRIDRSTHCGVLEFVADEGKIYLPHWMMRNMLLD 60
Query: 296 EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSK 355
EG L+ +ES SLPVA+F+KFQPQ+ DFLDITNPKAVLEN LR+FACLT+GD+IAI YN K
Sbjct: 61 EGGLLQVESASLPVASFAKFQPQSVDFLDITNPKAVLENALRSFACLTTGDIIAIKYNDK 120
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 35 IIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
+IMPPSAL+QL+ LNI YPMLFKLTN ++ R TH GVLEFVADEGK+YLP+W
Sbjct: 1 VIMPPSALDQLSMLNIVYPMLFKLTNNRIDRSTHCGVLEFVADEGKIYLPHW 52
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 107 IIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRKK 152
+IMPPSAL+QL+ LNI YPMLFKLTN ++ R TH GVLE K
Sbjct: 1 VIMPPSALDQLSMLNIVYPMLFKLTNNRIDRSTHCGVLEFVADEGK 46
>gi|428183156|gb|EKX52015.1| UFD1-like protein, CDC48 co-factor [Guillardia theta CCMP2712]
Length = 228
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H
Sbjct: 34 FSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLH 93
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG V +P+WMM+NL +D G+LV +ES +LP + K +PQ+ FLDI NPK
Sbjct: 94 CGVLEFIANEGSVLMPHWMMQNLGVDHGDLVTVESATLPKGQYVKLRPQSKTFLDIANPK 153
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN--AVTIIECDMNVDFAPPVGY 387
AVLEN LR+F+ LT G I I+YN+K Y++ V++ KP + A++I++ D+NVDF P Y
Sbjct: 154 AVLENTLRSFSALTKGSTIRIHYNNKQYDIDVVDIKPRDTGAISIVDADVNVDFDAPADY 213
Query: 388 TEPEKVKE 395
EP +V E
Sbjct: 214 VEPVRVPE 221
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H
Sbjct: 34 FSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLH 93
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG V +P+W
Sbjct: 94 CGVLEFIANEGSVLMPHW 111
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H GVL
Sbjct: 38 YHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLHCGVL 97
Query: 145 EL 146
E
Sbjct: 98 EF 99
>gi|239946413|gb|ACS36234.1| ubiquitin fusion degradation protein [Guillardia theta]
Length = 249
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H
Sbjct: 34 FSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLH 93
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG V +P+WMM+NL +D G+LV +ES +LP + K +PQ+ FLDI NPK
Sbjct: 94 CGVLEFIANEGSVLMPHWMMQNLGVDHGDLVTVESATLPKGQYVKLRPQSKTFLDIANPK 153
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN--AVTIIECDMNVDFAPPVGY 387
AVLEN LR+F+ LT G I I+YN+K Y++ V++ KP + A++I++ D+NVDF P Y
Sbjct: 154 AVLENTLRSFSALTKGSTIRIHYNNKQYDIDVVDIKPRDTGAISIVDADVNVDFDAPADY 213
Query: 388 TEPEKVKE 395
EP +V E
Sbjct: 214 VEPVRVPE 221
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H
Sbjct: 34 FSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLH 93
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG V +P+W
Sbjct: 94 CGVLEFIANEGSVLMPHW 111
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y V+ ++ +E GGKI++PPSAL+QL+ L I YPMLF++TN+ GR H GVL
Sbjct: 38 YHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRKLHCGVL 97
Query: 145 EL 146
E
Sbjct: 98 EF 99
>gi|390597829|gb|EIN07228.1| UFD1-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 480
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 128/183 (69%), Gaps = 2/183 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ +K +SV+M PG +R+++ GGKIIMPPSAL LT L++ P +FKL N
Sbjct: 32 PRAYDDYFKAYSVAMLPGKQRDNLSYGGKIIMPPSALANLTSLDLESPWMFKLRNPANPA 91
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A EG V+LPYWMM+ L L+EG+ + I V LP F KFQPQ FL++
Sbjct: 92 ASTHAGVLEFIAQEGCVHLPYWMMKTLRLNEGDPIRITGVELPKGKFVKFQPQQVHFLEV 151
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNVDFAPP 384
++PKA LE LRNF+ LT GD+I I YNS ++ + V+E +PG +++++ D+ VDFA P
Sbjct: 152 SDPKATLEVALRNFSALTQGDVIEIVYNSIVFGMLVMEAQPGGEGISVLDVDLEVDFAAP 211
Query: 385 VGY 387
VGY
Sbjct: 212 VGY 214
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ +K +SV+M PG +R+++ GGKIIMPPSAL LT L++ P +FKL N
Sbjct: 32 PRAYDDYFKAYSVAMLPGKQRDNLSYGGKIIMPPSALANLTSLDLESPWMFKLRNPANPA 91
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+A EG V+LPYW
Sbjct: 92 ASTHAGVLEFIAQEGCVHLPYW 113
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGV 143
+ +SV+M PG +R+++ GGKIIMPPSAL LT L++ P +FKL N TH+GV
Sbjct: 39 FKAYSVAMLPGKQRDNLSYGGKIIMPPSALANLTSLDLESPWMFKLRNPANPAASTHAGV 98
Query: 144 LEL 146
LE
Sbjct: 99 LEF 101
>gi|367055042|ref|XP_003657899.1| hypothetical protein THITE_2124095 [Thielavia terrestris NRRL 8126]
gi|347005165|gb|AEO71563.1| hypothetical protein THITE_2124095 [Thielavia terrestris NRRL 8126]
Length = 331
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 130/177 (73%), Gaps = 3/177 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLEFVA+EG
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
+ Y+P WMM+ L LD G+++ +++ SL +A K QPQ+ +FL+IT+P+AVLE RNFA
Sbjct: 61 RAYIPQWMMQTLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNFA 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTEPEKVK 394
LT GD+ YN ++Y++ VL+ KP V++IE D++V+FAPPVGY EPE+V+
Sbjct: 121 ALTKGDVFNFEYNDEVYDVAVLDVKPETEKMGVSMIETDVSVEFAPPVGYVEPERVQ 177
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLEFVA+EG
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEG 60
Query: 80 KVYLPYWCF 88
+ Y+P W
Sbjct: 61 RAYIPQWMM 69
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLE
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEF 55
>gi|367035510|ref|XP_003667037.1| hypothetical protein MYCTH_2121561 [Myceliophthora thermophila ATCC
42464]
gi|347014310|gb|AEO61792.1| hypothetical protein MYCTH_2121561 [Myceliophthora thermophila ATCC
42464]
Length = 331
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLEFVA+EG
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEG 60
Query: 281 KVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFA 340
+ Y+P WMM+ L LD G+++ +++ SL +A K QPQ+ +FL+IT+P+AVLE RNFA
Sbjct: 61 RAYIPQWMMQTLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNFA 120
Query: 341 CLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTEPEKV 393
LT GD+ YN +IY++ VL+ KP + V++IE D++V+FAPPVGY EPEK
Sbjct: 121 ALTKGDVFNFEYNDEIYDVAVLDVKPESEKMGVSMIETDVSVEFAPPVGYVEPEKA 176
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEG 79
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLEFVA+EG
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEG 60
Query: 80 KVYLPYWCF 88
+ Y+P W
Sbjct: 61 RAYIPQWMM 69
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
M PG ER ++ G KI +PPSAL++++RL++ +P++ +L N G+ TH+GVLE
Sbjct: 1 MAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEF 55
>gi|223997792|ref|XP_002288569.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975677|gb|EED94005.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 178
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y C+S + ++ +E+G KI++PPSA + L RL + YPMLF+L + G +TH
Sbjct: 1 FEEQYHCYSAAY---ADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTH 57
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG +P+WMM+NLL++EG ++ + +VSLP A F KFQ Q DFL+I+NP+
Sbjct: 58 CGVLEFTAEEGSCVIPFWMMQNLLIEEGAVLTVTNVSLPKANFVKFQAQHVDFLEISNPR 117
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE+ LRNF+C+T GD+I + YNSK Y + E +P +A IIE D NVDF PVGY E
Sbjct: 118 AVLEHALRNFSCITKGDVICVPYNSKNYHFEIKEVRPQDAACIIETDCNVDFDAPVGYKE 177
Query: 390 P 390
P
Sbjct: 178 P 178
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y C+S + ++ +E+G KI++PPSA + L RL + YPMLF+L + G +TH
Sbjct: 1 FEEQYHCYSAAY---ADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTH 57
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG +P+W
Sbjct: 58 CGVLEFTAEEGSCVIPFW 75
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+S + ++ +E+G KI++PPSA + L RL + YPMLF+L + G +TH GVL
Sbjct: 5 YHCYSAAY---ADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTHCGVL 61
Query: 145 ELDGKR 150
E +
Sbjct: 62 EFTAEE 67
>gi|221488176|gb|EEE26390.1| ubiquitin fusion degradation UFD1 domain-containing protein
[Toxoplasma gondii GT1]
gi|221508688|gb|EEE34257.1| ubiquitin fusion degradation domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 317
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 146/229 (63%), Gaps = 15/229 (6%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y CF VS F G ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVS-FIG--KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG + PYWMM+NL L+EG++V + ++SLP TF + QP T +FL ++NP+
Sbjct: 80 TGVLEFVAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVELQPVTTEFLQVSNPR 139
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LR +A LT GD+I + + K ++L V + +P AV+IIE DM V+F P GY E
Sbjct: 140 AVLEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVE 199
Query: 390 PEKVKEKEEDNMIDPV-----------DLMPEPSGFVAFHGTGNRLDGK 427
P V+ K+ + D + S V F G G RLDGK
Sbjct: 200 P-TVRAKQSTSEADAAMNSEEESSEIDSAESDSSQRVLFAGKGTRLDGK 247
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y CF VS F G ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVS-FIG--KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQL 117
+GVLEFVA+EG + PYW G E D+ R I +P +L
Sbjct: 80 TGVLEFVAEEGTCHFPYWMMQNL---GLEEGDIVRVRNISLPKGTFVEL 125
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF VS F G ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH+GVL
Sbjct: 27 YSCFPVS-FIG--KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHTGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|412990791|emb|CCO18163.1| predicted protein [Bathycoccus prasinos]
Length = 400
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 154/274 (56%), Gaps = 56/274 (20%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL-NICYPMLFKLTNQKMGRIT 268
F Y+ + VS +R ++++G KII+PPSAL++L++L ++ +PMLF + N K T
Sbjct: 20 FEAQYRAYPVSFI---DRSELDKGDKIILPPSALDRLSQLGDLDFPMLFNVENVKEKTKT 76
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEF+ADEG YLPYWMM+NL L EG+++ +++ LP TF K QPQT DFL+I+NP
Sbjct: 77 HCGVLEFIADEGVCYLPYWMMQNLRLVEGDVLRVKNARLPKGTFVKLQPQTSDFLNISNP 136
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLE CLRN+ CLT D I YN+K Y + V+E KP + V ++E D VDFA P+ Y
Sbjct: 137 KAVLETCLRNYTCLTVNDTFMIEYNNKRYFIDVIEAKPADGVCVVETDCEVDFAAPLDYV 196
Query: 389 EPE------------------------KVKEKEEDNMID-----PVDLMPEPSG------ 413
EP+ K + EE++ +D VDL +
Sbjct: 197 EPDYNSKGGGLGGGGGGNATTTTTTTKKRGDGEEESFMDVDENGVVDLTGGSTSTRAKDE 256
Query: 414 -----------------FVAFHGTGNRLDGKRKK 430
F+AF G+GNRLDGK K
Sbjct: 257 KKEEKKDEKEEENNKNTFLAFAGSGNRLDGKAPK 290
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL-NICYPMLFKLTNQKMGRIT 67
F Y+ + VS +R ++++G KII+PPSAL++L++L ++ +PMLF + N K T
Sbjct: 20 FEAQYRAYPVSFI---DRSELDKGDKIILPPSALDRLSQLGDLDFPMLFNVENVKEKTKT 76
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF+ADEG YLPYW
Sbjct: 77 HCGVLEFIADEGVCYLPYW 95
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL-NICYPMLFKLTNQKMGRITHSGV 143
Y + VS +R ++++G KII+PPSAL++L++L ++ +PMLF + N K TH GV
Sbjct: 24 YRAYPVSFI---DRSELDKGDKIILPPSALDRLSQLGDLDFPMLFNVENVKEKTKTHCGV 80
Query: 144 LEL 146
LE
Sbjct: 81 LEF 83
>gi|116204729|ref|XP_001228175.1| hypothetical protein CHGG_10248 [Chaetomium globosum CBS 148.51]
gi|88176376|gb|EAQ83844.1| hypothetical protein CHGG_10248 [Chaetomium globosum CBS 148.51]
Length = 333
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 4/177 (2%)
Query: 221 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG-RITHSGVLEFVADE 279
M PG ER D+ G KI +PPSAL++++R+++ +P++ +L N G + TH+GVLEFVA+E
Sbjct: 1 MAPGAERPDLNYGSKIFLPPSALDKVSRMHVQWPIMLELINGAAGGKHTHAGVLEFVAEE 60
Query: 280 GKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNF 339
G+ Y+P WMM++L LD G+++ +++ SL +A K QPQ+ +FL+IT+P+AVLE RNF
Sbjct: 61 GRAYIPQWMMQSLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNF 120
Query: 340 ACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFAPPVGYTEPEKV 393
A LT GD+ YN ++Y++ VL+ KP A V++IE D++VDFAPPVGY EPE+
Sbjct: 121 AALTKGDVFNFEYNDEVYDMAVLDVKPETARMGVSMIETDVSVDFAPPVGYVEPERA 177
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 20 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGVLEFVADE 78
M PG ER D+ G KI +PPSAL++++R+++ +P++ +L N G+ TH+GVLEFVA+E
Sbjct: 1 MAPGAERPDLNYGSKIFLPPSALDKVSRMHVQWPIMLELINGAAGGKHTHAGVLEFVAEE 60
Query: 79 GKVYLPYWCF 88
G+ Y+P W
Sbjct: 61 GRAYIPQWMM 70
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 92 MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGVLEL 146
M PG ER D+ G KI +PPSAL++++R+++ +P++ +L N G+ TH+GVLE
Sbjct: 1 MAPGAERPDLNYGSKIFLPPSALDKVSRMHVQWPIMLELINGAAGGKHTHAGVLEF 56
>gi|237832843|ref|XP_002365719.1| ubiquitin fusion degradation domain-containing protein [Toxoplasma
gondii ME49]
gi|211963383|gb|EEA98578.1| ubiquitin fusion degradation domain-containing protein [Toxoplasma
gondii ME49]
Length = 335
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 144/229 (62%), Gaps = 15/229 (6%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG + PYWMM+NL L+EG++V + ++SLP TF + QP T +FL ++NP+
Sbjct: 80 TGVLEFVAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVELQPVTTEFLQVSNPR 139
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE LR +A LT GD+I + + K ++L V + +P AV+IIE DM V+F P GY E
Sbjct: 140 AVLEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVE 199
Query: 390 PEKVKEKEEDNMIDPV-----------DLMPEPSGFVAFHGTGNRLDGK 427
P V+ K+ + D + S V F G G RLDGK
Sbjct: 200 P-TVRAKQSTSEADAAMNSEEESSEIDSAESDSSQRVLFAGKGTRLDGK 247
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQL 117
+GVLEFVA+EG + PYW G E D+ R I +P +L
Sbjct: 80 TGVLEFVAEEGTCHFPYWMMQNL---GLEEGDIVRVRNISLPKGTFVEL 125
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH+GVL
Sbjct: 27 YSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHTGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|268537012|ref|XP_002633642.1| C. briggsae CBR-UFD-1 protein [Caenorhabditis briggsae]
Length = 341
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 145/247 (58%), Gaps = 28/247 (11%)
Query: 210 FNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
+++++ + P + ++ GGKI++P SAL+ L R+NI YPMLFKLTN R
Sbjct: 21 YDQTFVVYGAVFLPNATQTKIAEINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQR 80
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
ITH GVLEF A EG+ LP+WMM+ L L +G+ + +ES ++P ATF+K +P + +FL+IT
Sbjct: 81 ITHCGVLEFSAPEGQAILPHWMMQQLGLSDGDTIRVESATVPKATFAKLKPMSLEFLNIT 140
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKA LE LR +ACLT GD I +Y + E +++ KP N+V IIECD+N+DF P G
Sbjct: 141 NPKAFLEVELRKYACLTKGDRIPTSYAGQTLEFSIVDVKPANSVCIIECDVNLDFDAPEG 200
Query: 387 YTEPEKVKEKEEDNMIDPVDLMPEP---SGFVA---------------FHGTGNRLDGKR 428
Y E E + V++ P P S FV F G G RLDGK+
Sbjct: 201 YVE-------EPRQVAPAVNVKPPPPPASAFVGVGKPLGGAATTATSVFGGAGRRLDGKK 253
Query: 429 KKKDTVE 435
K +V
Sbjct: 254 KPTSSVS 260
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 9 FNRSYKCFSVSMFPGNER---EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
+++++ + P + ++ GGKI++P SAL+ L R+NI YPMLFKLTN R
Sbjct: 21 YDQTFVVYGAVFLPNATQTKIAEINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQR 80
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
ITH GVLEF A EG+ LP+W
Sbjct: 81 ITHCGVLEFSAPEGQAILPHW 101
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 100 DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ GGKI++P SAL+ L R+NI YPMLFKLTN RITH GVLE
Sbjct: 43 EINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQRITHCGVLEFSA 91
>gi|160331249|ref|XP_001712332.1| ufd [Hemiselmis andersenii]
gi|159765779|gb|ABW98007.1| ufd [Hemiselmis andersenii]
Length = 202
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 132/191 (69%), Gaps = 3/191 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F+ KC+ VS ++ ++E+G KI++PPS LE L+ L++ +P++F+L ++ GR+TH
Sbjct: 8 FDFQLKCYPVSFI---QKFELEKGDKIVLPPSILENLSTLDVEWPLMFELKSKFSGRVTH 64
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GV+EF+ADEG Y+PYWMM+NL + EGE ++ L TF K QPQT DFLDI+N K
Sbjct: 65 CGVMEFIADEGCAYIPYWMMQNLAICEGEKISFRYKHLEKGTFVKIQPQTLDFLDISNTK 124
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
AVLE+ LRNF CLT D I+I YN IY L V+E KPGNA++I+E D+NVDF P
Sbjct: 125 AVLESKLRNFTCLTKSDTISIEYNEIIYWLNVVEVKPGNAISIVETDVNVDFIAPNNSHN 184
Query: 390 PEKVKEKEEDN 400
EK K K E+N
Sbjct: 185 LEKEKFKNENN 195
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F+ KC+ VS ++ ++E+G KI++PPS LE L+ L++ +P++F+L ++ GR+TH
Sbjct: 8 FDFQLKCYPVSFI---QKFELEKGDKIVLPPSILENLSTLDVEWPLMFELKSKFSGRVTH 64
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNER-----EDVERGGKIIMPPSALEQLTRLNIC 123
GV+EF+ADEG Y+PYW E+ + +E+G + + P L+ L N
Sbjct: 65 CGVMEFIADEGCAYIPYWMMQNLAICEGEKISFRYKHLEKGTFVKIQPQTLDFLDISNTK 124
Query: 124 YPMLFKLTN 132
+ KL N
Sbjct: 125 AVLESKLRN 133
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
C+ VS ++ ++E+G KI++PPS LE L+ L++ +P++F+L ++ GR+TH GV+E
Sbjct: 14 CYPVSFI---QKFELEKGDKIVLPPSILENLSTLDVEWPLMFELKSKFSGRVTHCGVMEF 70
>gi|354546852|emb|CCE43584.1| hypothetical protein CPAR2_212280 [Candida parapsilosis]
Length = 355
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 127/186 (68%), Gaps = 4/186 (2%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +T
Sbjct: 12 FEEYFRCYPIAMMPDLVRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 71
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEF ++EG+ Y+P WMM L L G L+ I + L + F K +PQ+ DFLDI++P
Sbjct: 72 HSGVLEFTSEEGRCYIPQWMMDTLQLQPGSLIKIRNCDLSLGKFVKIEPQSVDFLDISDP 131
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I +NYN IY + VLE KP ++ + ++E D+ DFAPPV
Sbjct: 132 KAVLENVLRKFSTLTVNDVIEVNYNDSIYGIKVLEVKPESSTHGICVVETDLETDFAPPV 191
Query: 386 GYTEPE 391
GY EPE
Sbjct: 192 GYVEPE 197
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +T
Sbjct: 12 FEEYFRCYPIAMMPDLVRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 71
Query: 68 HSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
HSGVLEF ++EG+ Y+P W ++ + PG+
Sbjct: 72 HSGVLEFTSEEGRCYIPQWMMDTLQLQPGS 101
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +THSGV
Sbjct: 16 FRCYPIAMMPDLVRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLTHSGV 75
Query: 144 LEL 146
LE
Sbjct: 76 LEF 78
>gi|17539896|ref|NP_502349.1| Protein UFD-1, isoform b [Caenorhabditis elegans]
gi|5824461|emb|CAB54216.1| Protein UFD-1, isoform b [Caenorhabditis elegans]
Length = 336
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 149/267 (55%), Gaps = 36/267 (13%)
Query: 228 EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
++ GGKI++P SAL L + NI PMLFKLTN + R+TH GVLEF A EG+ LP W
Sbjct: 36 SEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLW 95
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L LD+G+ + IES +LP ATF+K +P + +FL+ITNPKAVLE LR +ACLT D
Sbjct: 96 MMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDR 155
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
I +Y + E V++ KP N+V IIECD+N+DF PP GY E + ++ +
Sbjct: 156 IPTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVE----QPRQVTPAVTAKPP 211
Query: 408 MPEPSGFVA------------------FHGTGNRLDGKRKKKDTVE---------TGGTP 440
P+ S F+ F G G RLDGK+K +V + P
Sbjct: 212 APDASAFIGAGQKAGGSGGTGQNATSVFGGAGRRLDGKKKPSSSVSLSDGTGVSTSNAAP 271
Query: 441 TKREYQRGIP----HYDYEPNTLVFLR 463
+ IP + DY+P + FLR
Sbjct: 272 VANDLP-AIPPVVVNEDYKPGRVSFLR 297
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 27 EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
++ GGKI++P SAL L + NI PMLFKLTN + R+TH GVLEF A EG+ LP W
Sbjct: 36 SEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLW 95
>gi|17539898|ref|NP_502348.1| Protein UFD-1, isoform a [Caenorhabditis elegans]
gi|2501440|sp|Q19584.1|UFD1_CAEEL RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|3876091|emb|CAA93460.1| Protein UFD-1, isoform a [Caenorhabditis elegans]
Length = 342
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 149/266 (56%), Gaps = 34/266 (12%)
Query: 228 EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
++ GGKI++P SAL L + NI PMLFKLTN + R+TH GVLEF A EG+ LP W
Sbjct: 42 SEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLW 101
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L LD+G+ + IES +LP ATF+K +P + +FL+ITNPKAVLE LR +ACLT D
Sbjct: 102 MMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDR 161
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
I +Y + E V++ KP N+V IIECD+N+DF PP GY E + ++ +
Sbjct: 162 IPTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVE----QPRQVTPAVTAKPP 217
Query: 408 MPEPSGFVA------------------FHGTGNRLDGKRKKKDTVE----TG-GTPTKRE 444
P+ S F+ F G G RLDGK+K +V TG T
Sbjct: 218 APDASAFIGAGQKAGGSGGTGQNATSVFGGAGRRLDGKKKPSSSVSLSDGTGVSTSNAAP 277
Query: 445 YQRGIP-------HYDYEPNTLVFLR 463
+P + DY+P + FLR
Sbjct: 278 VANDLPAIPPVVVNEDYKPGRVSFLR 303
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 27 EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
++ GGKI++P SAL L + NI PMLFKLTN + R+TH GVLEF A EG+ LP W
Sbjct: 42 SEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLW 101
>gi|351709728|gb|EHB12647.1| Ubiquitin fusion degradation protein 1-like protein [Heterocephalus
glaber]
Length = 146
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 116/145 (80%), Gaps = 6/145 (4%)
Query: 198 FGFNMFPD-IPR----PFNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FN+F IPR F+ Y+CFSVSM G N+R +VE+GGKI MPPSAL+QL+ LNI
Sbjct: 2 FSFNIFDHPIPRVFQNHFSTQYRCFSVSMLAGPNDRSNVEKGGKITMPPSALDQLSHLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGVLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAVLENCL 336
+SKFQPQ+ DFLDITNPKAVLEN L
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENAL 146
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R +VE+GGKI MPPSAL+QL+ LNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSNVEKGGKITMPPSALDQLSHLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEFVADEG YLP+W
Sbjct: 79 HCGVLEFVADEGICYLPHW 97
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R +VE+GGKI MPPSAL+QL+ LNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSNVEKGGKITMPPSALDQLSHLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|350592681|ref|XP_003483514.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Sus scrofa]
Length = 141
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 115/140 (82%), Gaps = 6/140 (4%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAV 331
+SKFQPQ+ DFLDITNPKAV
Sbjct: 122 YSKFQPQSPDFLDITNPKAV 141
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
N+ R+TH GVLEFVADEG YLP+W
Sbjct: 71 NKNSDRMTHCGVLEFVADEGICYLPHW 97
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|393227853|gb|EJD35515.1| UFD1-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 462
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ +K +S++M ER +V GGKII+PPSAL +LT+L I P LF L N
Sbjct: 37 PRAYDEYFKAYSMAMLSSRERANVSYGGKIILPPSALARLTQLEIESPWLFSLKNPANPA 96
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG +LPYWMM+ L L EG+ + I +LP K QPQT DFL++
Sbjct: 97 ASTHAGVLEFIAEEGVAHLPYWMMKTLRLKEGDPIRITGATLPKGKRVKLQPQTVDFLEL 156
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET-KPGNAVTIIECDMNVDFAPP 384
+PKAVLE LRNF+ LT GD++ IN+N+ + + ++E PG + I++ D+ VDFA P
Sbjct: 157 ADPKAVLEQALRNFSTLTQGDIVEINHNTITFPILIMEILPPGPGIAIVDTDLEVDFAAP 216
Query: 385 VGYTEPEK 392
GY EPE+
Sbjct: 217 KGYVEPER 224
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ +K +S++M ER +V GGKII+PPSAL +LT+L I P LF L N
Sbjct: 37 PRAYDEYFKAYSMAMLSSRERANVSYGGKIILPPSALARLTQLEIESPWLFSLKNPANPA 96
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG +LPYW
Sbjct: 97 ASTHAGVLEFIAEEGVAHLPYWMM 120
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+S++M ER +V GGKII+PPSAL +LT+L I P LF L N TH+GVLE
Sbjct: 46 AYSMAMLSSRERANVSYGGKIILPPSALARLTQLEIESPWLFSLKNPANPAASTHAGVLE 105
Query: 146 L 146
Sbjct: 106 F 106
>gi|409082241|gb|EKM82599.1| hypothetical protein AGABI1DRAFT_97566 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 456
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 131/208 (62%), Gaps = 7/208 (3%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERG-----GKIIMPPSALEQLTRLNICYPMLFKLTN 261
P F+ K +SV+M PG +RE+V +IMPPSAL LT L + P F+L N
Sbjct: 26 PNSFDEYLKAYSVAMLPGRQRENVSYDCLLILALVIMPPSALASLTNLEVEGPWTFQLRN 85
Query: 262 -QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
TH+GVLEF+A+EG V+LPYWMM+ L L+EG+ + I L F K Q QT
Sbjct: 86 PANSAASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELVKGKFVKLQAQTV 145
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNV 379
FL+I++PKAVLE LRNF+ LT GD+I I+YNS ++ L V+ETKPG ++I++ D+ V
Sbjct: 146 HFLEISDPKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETKPGGEGISILDTDLEV 205
Query: 380 DFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
DFA PVGY EPE+ K M +++
Sbjct: 206 DFAAPVGYVEPERPKASALPTMASRLNI 233
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERG-----GKIIMPPSALEQLTRLNICYPMLFKLTN 60
P F+ K +SV+M PG +RE+V +IMPPSAL LT L + P F+L N
Sbjct: 26 PNSFDEYLKAYSVAMLPGRQRENVSYDCLLILALVIMPPSALASLTNLEVEGPWTFQLRN 85
Query: 61 -QKMGRITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LPYW
Sbjct: 86 PANSAASTHAGVLEFIAEEGVVHLPYWMM 114
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 87 CFSVSMFPGNEREDVERG-----GKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITH 140
+SV+M PG +RE+V +IMPPSAL LT L + P F+L N TH
Sbjct: 35 AYSVAMLPGRQRENVSYDCLLILALVIMPPSALASLTNLEVEGPWTFQLRNPANSAASTH 94
Query: 141 SGVLEL 146
+GVLE
Sbjct: 95 AGVLEF 100
>gi|448513555|ref|XP_003866984.1| Ufd1 protein [Candida orthopsilosis Co 90-125]
gi|380351322|emb|CCG21546.1| Ufd1 protein [Candida orthopsilosis Co 90-125]
Length = 368
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
Query: 210 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +T
Sbjct: 25 FEEYFRCYPIAMMPDLVRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 84
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
HSGVLEF ++EG+ Y+P WM L L G L+ +++ L + F K +PQ+ DFLDI++P
Sbjct: 85 HSGVLEFTSEEGRCYIPQWMTDTLKLQPGGLIKVKNCDLNLGKFVKIEPQSVDFLDISDP 144
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPV 385
KAVLEN LR F+ LT D+I +NYN IY + VLE KP + + ++E D+ DFAPPV
Sbjct: 145 KAVLENVLRKFSTLTVNDVIEVNYNDSIYGIKVLEVKPESDNHGICVVETDLETDFAPPV 204
Query: 386 GYTEPE 391
GY EPE
Sbjct: 205 GYVEPE 210
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F ++C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +T
Sbjct: 25 FEEYFRCYPIAMMPDLVRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 84
Query: 68 HSGVLEFVADEGKVYLPYW 86
HSGVLEF ++EG+ Y+P W
Sbjct: 85 HSGVLEFTSEEGRCYIPQW 103
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
+ C+ ++M P R +D GGKI +PPSAL +LT L+I YPMLF+L N++ +THSGV
Sbjct: 29 FRCYPIAMMPDLVRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLTHSGV 88
Query: 144 LEL 146
LE
Sbjct: 89 LEF 91
>gi|169154401|emb|CAQ13302.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 148
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 115/140 (82%), Gaps = 6/140 (4%)
Query: 198 FGFNMF-PDIPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF P + R F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFEPHVGRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVAT 311
YPMLFKLTN+ R+TH GVLEFVADEG YLP+WMM+NLLL+EG LV +ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVAT 121
Query: 312 FSKFQPQTCDFLDITNPKAV 331
+SKFQPQ+ DFLDITNPKAV
Sbjct: 122 YSKFQPQSPDFLDITNPKAV 141
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 9/135 (6%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 127
H GVLEFVADEG YLP+W + VE ++ S + + P
Sbjct: 79 HCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS------PDF 132
Query: 128 FKLTNQKM--GRITH 140
+TN K RITH
Sbjct: 133 LDITNPKAVYARITH 147
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|258597686|ref|XP_001348351.2| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
gi|255528789|gb|AAN36790.2| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
Length = 282
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 143/225 (63%), Gaps = 15/225 (6%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
F ++ PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 15 FLNVSEPFQEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 71
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
+ THSGVLEF++DEG ++PYWMM+ L L EG++V + SVSLP TF K +P + DF
Sbjct: 72 YTDKRTHSGVLEFISDEGTCHMPYWMMQQLNLKEGDIVRVTSVSLPKGTFVKLKPCSKDF 131
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFA 382
++++N +AVLE LRN+A LT GD I I+Y K YE+ +++ KP A TIIE D+ V+F
Sbjct: 132 MELSNHRAVLETALRNYATLTIGDNIVIHYLGKTYEIKIVDLKPAFACTIIETDVEVEFE 191
Query: 383 PPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
P+ ++EP + +++PE F G G R DGK
Sbjct: 192 EPIDHSEPVQY----------VTEIVPEEEN--KFKGKGQRTDGK 224
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 18/145 (12%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F ++ PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 15 FLNVSEPFQEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 71
Query: 62 KMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNERE-DVERGGKIIMPPSALEQLTRL 120
+ THSGVLEF++DEG ++PYW M N +E D+ R + +P +L
Sbjct: 72 YTDKRTHSGVLEFISDEGTCHMPYWM----MQQLNLKEGDIVRVTSVSLPKGT---FVKL 124
Query: 121 NICYPMLFKLTNQKMGRITHSGVLE 145
C +L+N H VLE
Sbjct: 125 KPCSKDFMELSN-------HRAVLE 142
>gi|429327681|gb|AFZ79441.1| ubiquitin fusion degradation protein, putative [Babesia equi]
Length = 269
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 163/264 (61%), Gaps = 30/264 (11%)
Query: 198 FGFNMFPDIPRPFNR--------SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL 249
+ +N F +I FN +Y+CFSVS F G +E +E G KI++P SAL +L
Sbjct: 2 WNWNQFDNIWTNFNNLSSTPLVNNYRCFSVS-FAG--KESMENGNKILLPQSALNELASR 58
Query: 250 NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPV 309
NI +PM+F++ N K G+ITH GVLEF+++EG +PYW+M+NL L+EG++V I +VSLP
Sbjct: 59 NISWPMMFEIKNPKNGKITHGGVLEFISEEGCCNIPYWVMQNLGLNEGQVVTIRNVSLPK 118
Query: 310 ATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA 369
A + K +P T D+ +I+NP+A+LE LRNFA LT+GD+I I+Y +K+Y + ++E KPG A
Sbjct: 119 ALWVKLKPLTEDYWEISNPRAILETSLRNFATLTAGDIIPIHYINKVYNIEIVELKPGFA 178
Query: 370 VTIIECDMNVDF-APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKR 428
+IIE DM V+F + PV + E ++K ++ P+ G+R+DGK
Sbjct: 179 CSIIETDMEVEFESLPVEPAKAESTQDKRPCSVQLPM---------------GSRIDGKT 223
Query: 429 ---KKKDTVETGGTPTKREYQRGI 449
K+ T E TP + GI
Sbjct: 224 PKIAKQKTQEQNVTPWNNKLPFGI 247
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
P +Y+CFSVS F G +E +E G KI++P SAL +L NI +PM+F++ N K G+IT
Sbjct: 21 PLVNNYRCFSVS-FAG--KESMENGNKILLPQSALNELASRNISWPMMFEIKNPKNGKIT 77
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF+++EG +PYW
Sbjct: 78 HGGVLEFISEEGCCNIPYW 96
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVS F G +E +E G KI++P SAL +L NI +PM+F++ N K G+ITH GVL
Sbjct: 26 YRCFSVS-FAG--KESMENGNKILLPQSALNELASRNISWPMMFEIKNPKNGKITHGGVL 82
Query: 145 EL 146
E
Sbjct: 83 EF 84
>gi|299753335|ref|XP_001833205.2| ubiquitin fusion degradation protein I [Coprinopsis cinerea
okayama7#130]
gi|298410254|gb|EAU88478.2| ubiquitin fusion degradation protein I [Coprinopsis cinerea
okayama7#130]
Length = 467
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 132/203 (65%), Gaps = 8/203 (3%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 265
PR ++ K +SV+M G ERE+V GGK L +LT+L+I P F+L N
Sbjct: 46 PRAYDEYLKAYSVAMMQGRERENVSYGGKT------LARLTQLDIEGPWTFQLRNPSNPA 99
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
TH+GVLEF+A+EG V+LP+WMM+ L L+EG+ + I LP F K Q QT FL+I
Sbjct: 100 ASTHAGVLEFIAEEGVVHLPFWMMKTLRLNEGDPIRITGTELPKGKFVKLQAQTVHFLEI 159
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA-VTIIECDMNVDFAPP 384
++PKAVLE LRNF+ LT GD+I I+YNS I+ L V+ETKPG A +++++ D+ VDFA P
Sbjct: 160 SDPKAVLEQALRNFSALTQGDIIEISYNSIIFGLLVMETKPGGAGISVLDTDLEVDFAAP 219
Query: 385 VGYTEPEKVKEKEEDNMIDPVDL 407
VGY EPE+ K + M + +
Sbjct: 220 VGYVEPERPKPQAPPTMASKLKI 242
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMG 64
PR ++ K +SV+M G ERE+V GGK L +LT+L+I P F+L N
Sbjct: 46 PRAYDEYLKAYSVAMMQGRERENVSYGGKT------LARLTQLDIEGPWTFQLRNPSNPA 99
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+A+EG V+LP+W
Sbjct: 100 ASTHAGVLEFIAEEGVVHLPFW 121
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+SV+M G ERE+V GGK L +LT+L+I P F+L N TH+GVLE
Sbjct: 55 AYSVAMMQGRERENVSYGGKT------LARLTQLDIEGPWTFQLRNPSNPAASTHAGVLE 108
Query: 146 L 146
Sbjct: 109 F 109
>gi|308453907|ref|XP_003089633.1| hypothetical protein CRE_24314 [Caenorhabditis remanei]
gi|308269637|gb|EFP13590.1| hypothetical protein CRE_24314 [Caenorhabditis remanei]
Length = 341
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 143/247 (57%), Gaps = 26/247 (10%)
Query: 210 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
+++++ + P + ++ GGKI++P SAL+ L RLNI YPMLFKLTN R
Sbjct: 19 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQR 78
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
ITH GVLEF A EG+ LP WMM+ L L +G+ V +ES ++P ATF+K +P + +FL+IT
Sbjct: 79 ITHCGVLEFSAPEGQAILPQWMMQQLGLTDGDTVRVESATVPKATFAKLKPMSLEFLNIT 138
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NP+A LE LR +ACLT D+I +Y + E V++ KP N+V IIECD+N+DF P G
Sbjct: 139 NPRAFLEVELRKYACLTKNDLIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDFDAPEG 198
Query: 387 YTE-PEKVKEKEEDNMIDPVDLMPEPSGFVA-----------------FHGTGNRLDGKR 428
Y E P V N+ P P S F+ F G G RLDGK+
Sbjct: 199 YVEQPRSVAPSV--NVKPPA---PPASAFLGAGQATAGTGSTTTTTSVFGGAGRRLDGKK 253
Query: 429 KKKDTVE 435
K +V
Sbjct: 254 KPTSSVS 260
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 9 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
+++++ + P + ++ GGKI++P SAL+ L RLNI YPMLFKLTN R
Sbjct: 19 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQR 78
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
ITH GVLEF A EG+ LP W
Sbjct: 79 ITHCGVLEFSAPEGQAILPQW 99
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 100 DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ GGKI++P SAL+ L RLNI YPMLFKLTN RITH GVLE
Sbjct: 41 EINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQRITHCGVLEFSA 89
>gi|328875576|gb|EGG23940.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium fasciculatum]
Length = 314
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 142/260 (54%), Gaps = 34/260 (13%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MF + P R + F+V + + +E GGKI++PPSAL L+RLNI YPMLF+++N
Sbjct: 7 MFGHVQAPAGRFNQKFNVLSMNISGKSGLEAGGKILLPPSALNTLSRLNIQYPMLFEISN 66
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
Q+ R +H G+ EF A+EG Y+P WMM NL L + ++V+I+S SLP F K QP +
Sbjct: 67 QQKHRSSHCGIQEFSAEEGVCYMPKWMMENLHLKDNDIVDIKSTSLPSGQFVKIQPHSSS 126
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMN 378
FLDI+NPKAVLEN LR FA LT + I YN Y L V+E K P NA++IIE D++
Sbjct: 127 FLDISNPKAVLENALRKFATLTKSEDFVIEYNKNKYYLKVVEIKPHNPSNAISIIETDIS 186
Query: 379 VDFAPPVGYTEPEK----VKEKEEDNMIDPVDLMPEPSG--------------------- 413
VDFAPP+ E + + N + +P G
Sbjct: 187 VDFAPPLDSKEATQPSGGSTPQASGNGSGGITFGSQPIGIGGNDKKKKTGDDSDSDESDS 246
Query: 414 ------FVAFHGTGNRLDGK 427
F AF G G RLDGK
Sbjct: 247 DDDEPKFKAFGGAGTRLDGK 266
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MF + P R + F+V + + +E GGKI++PPSAL L+RLNI YPMLF+++N
Sbjct: 7 MFGHVQAPAGRFNQKFNVLSMNISGKSGLEAGGKILLPPSALNTLSRLNIQYPMLFEISN 66
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVE 102
Q+ R +H G+ EF A+EG Y+P W N+ D++
Sbjct: 67 QQKHRSSHCGIQEFSAEEGVCYMPKWMMENLHLKDNDIVDIK 108
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELD 147
+ +E GGKI++PPSAL L+RLNI YPMLF+++NQ+ R +H G+ E
Sbjct: 32 KSGLEAGGKILLPPSALNTLSRLNIQYPMLFEISNQQKHRSSHCGIQEFS 81
>gi|156102162|ref|XP_001616774.1| ubiquitin fusion degradation protein [Plasmodium vivax Sal-1]
gi|148805648|gb|EDL47047.1| ubiquitin fusion degradation protein, putative [Plasmodium vivax]
Length = 317
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 140/228 (61%), Gaps = 15/228 (6%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
F +I PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 51 FLNISEPFTEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 107
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
+ THSGVLEF++DEG ++PYWMM+ L L EG++V + SVSLP TF K +P + DF
Sbjct: 108 YTEKRTHSGVLEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGTFVKLKPCSTDF 167
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFA 382
++++N +AVLE LRN+A LT GD I I+Y YE+ +++ KP A TIIE D+ V+F
Sbjct: 168 MELSNHRAVLETALRNYATLTIGDNIVIHYLGNTYEIKIVDLKPAFACTIIETDVEVEFE 227
Query: 383 PPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKK 430
PV Y + + E+ P P F G G R DGK K
Sbjct: 228 EPVDYKQSVQYVEE------------PVPVEESKFKGKGQRTDGKACK 263
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F +I PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 51 FLNISEPFTEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 107
Query: 62 KMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLN 121
+ THSGVLEF++DEG ++PYW + D+ R + +P +L
Sbjct: 108 YTEKRTHSGVLEFISDEGTCHMPYWMMQQLCL---KEGDIVRVTSVSLPKGT---FVKLK 161
Query: 122 ICYPMLFKLTNQKMGRITHSGVLE 145
C +L+N H VLE
Sbjct: 162 PCSTDFMELSN-------HRAVLE 178
>gi|388581875|gb|EIM22182.1| UFD1-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 449
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 146/250 (58%), Gaps = 17/250 (6%)
Query: 198 FGFNMFPDIP-RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
FG + F P F + Y+ +SV+M GNER +++ GGKIIMPPSAL +LT L I P
Sbjct: 66 FGGHAFGRPPASAFTQHYRAYSVAMMGGNERPNLQYGGKIIMPPSALARLTDLEIESPWT 125
Query: 257 FKLTNQKM-GRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
F++++ + + TH+GVLEF+ADEG V+LP WMM+ L L+EG + I LP F+K
Sbjct: 126 FEVSSARNPTKKTHAGVLEFIADEGNVHLPAWMMKQLELEEGSPLKISGAVLPKGKFTKL 185
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTI 372
Q QT DFL+I++ K VLE LRNF+ LT GD I I +N +EL V+E +P ++ I
Sbjct: 186 QAQTTDFLEISDHKTVLERALRNFSTLTKGDYIEILHNCITFELLVMEIEPEPDNQSIFI 245
Query: 373 IECDMNVDFAPPVGYTEP------------EKVKEKEEDNMIDPVDLMPEPSGFVAFHGT 420
I+ D+ VDFAPP GY EP K+K P+ P + F G+
Sbjct: 246 IDTDLEVDFAPPKGYVEPAPKPREPQPTMASKMKIDTRAQEDSPMSSRPTSTVPEVFKGS 305
Query: 421 GNRLDGKRKK 430
G L G++ K
Sbjct: 306 GQTLGGRKTK 315
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRIT 67
F + Y+ +SV+M GNER +++ GGKIIMPPSAL +LT L I P F++++ + + T
Sbjct: 79 FTQHYRAYSVAMMGGNERPNLQYGGKIIMPPSALARLTDLEIESPWTFEVSSARNPTKKT 138
Query: 68 HSGVLEFVADEGKVYLPYW 86
H+GVLEF+ADEG V+LP W
Sbjct: 139 HAGVLEFIADEGNVHLPAW 157
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM-GRITHSGV 143
Y +SV+M GNER +++ GGKIIMPPSAL +LT L I P F++++ + + TH+GV
Sbjct: 83 YRAYSVAMMGGNERPNLQYGGKIIMPPSALARLTDLEIESPWTFEVSSARNPTKKTHAGV 142
Query: 144 LEL 146
LE
Sbjct: 143 LEF 145
>gi|308477183|ref|XP_003100806.1| CRE-UFD-1 protein [Caenorhabditis remanei]
gi|308264618|gb|EFP08571.1| CRE-UFD-1 protein [Caenorhabditis remanei]
Length = 351
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 143/246 (58%), Gaps = 26/246 (10%)
Query: 210 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
+++++ + P + ++ GGKI++P SAL+ L RLNI YPMLFKLTN R
Sbjct: 29 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQR 88
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+TH GVLEF A EG+ LP WMM+ L L +G+ V +ES ++P ATF+K +P + +FL+IT
Sbjct: 89 VTHCGVLEFSAPEGQAILPQWMMQQLGLTDGDTVRVESATVPKATFAKLKPMSLEFLNIT 148
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NP+A LE LR +ACLT D+I +Y + E V++ KP N+V IIECD+N+DF P G
Sbjct: 149 NPRAFLEVELRKYACLTKNDLIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDFDAPEG 208
Query: 387 YTE-PEKVKEKEEDNMIDPVDLMPEPSGFVA-----------------FHGTGNRLDGKR 428
Y E P V N+ P P S F+ F G G RLDGK+
Sbjct: 209 YVEQPRSVAPSV--NVKPPA---PPASAFLGAGQATAGTGSTATTTSVFGGAGRRLDGKK 263
Query: 429 KKKDTV 434
K +V
Sbjct: 264 KPTSSV 269
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 9 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
+++++ + P + ++ GGKI++P SAL+ L RLNI YPMLFKLTN R
Sbjct: 29 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQR 88
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
+TH GVLEF A EG+ LP W
Sbjct: 89 VTHCGVLEFSAPEGQAILPQW 109
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 100 DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ GGKI++P SAL+ L RLNI YPMLFKLTN R+TH GVLE
Sbjct: 51 EINYGGKILLPTSALDLLLRLNIEYPMLFKLTNMPAQRVTHCGVLEFSA 99
>gi|156063974|ref|XP_001597909.1| hypothetical protein SS1G_02105 [Sclerotinia sclerotiorum 1980]
gi|154697439|gb|EDN97177.1| hypothetical protein SS1G_02105 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 338
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 118/159 (74%), Gaps = 6/159 (3%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQKMG---RITHSGVLEFVADEGKVYLPYWMMRNLLL 294
MPPSALE+LTRL+I YPMLF+L N + ++TH+GVLEF+ADEGKVYLP+WMM+ L L
Sbjct: 1 MPPSALEKLTRLHITYPMLFELINSQHPDGPKLTHAGVLEFIADEGKVYLPHWMMQTLGL 60
Query: 295 DEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNS 354
+ G+L I+S LP A+ K QPQ+ +FLDI+NPKAVLE R+F+ LT GD+ + YN
Sbjct: 61 ETGDLFQIKSTDLPPASLIKLQPQSVNFLDISNPKAVLEKAFRDFSTLTKGDIFSFYYND 120
Query: 355 KIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTEP 390
+Y++ VLE KP V+++E D++VDFA P+GY EP
Sbjct: 121 TVYDVAVLEVKPVTDKMGVSMLETDVSVDFAAPLGYVEP 159
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQKMG---RITHSGVLEFVADEGKVYLPYWCFSVSMF 93
MPPSALE+LTRL+I YPMLF+L N + ++TH+GVLEF+ADEGKVYLP+W
Sbjct: 1 MPPSALEKLTRLHITYPMLFELINSQHPDGPKLTHAGVLEFIADEGKVYLPHWMMQTL-- 58
Query: 94 PGNEREDVERGGKIIMPPSALEQLTRLNICY 124
G E D+ + +PP++L +L ++ +
Sbjct: 59 -GLETGDLFQIKSTDLPPASLIKLQPQSVNF 88
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 109 MPPSALEQLTRLNICYPMLFKLTNQKM---GRITHSGVLEL 146
MPPSALE+LTRL+I YPMLF+L N + ++TH+GVLE
Sbjct: 1 MPPSALEKLTRLHITYPMLFELINSQHPDGPKLTHAGVLEF 41
>gi|341890696|gb|EGT46631.1| hypothetical protein CAEBREN_24565 [Caenorhabditis brenneri]
Length = 336
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 157/280 (56%), Gaps = 27/280 (9%)
Query: 210 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
+++++ + P + ++ GGKI++P SAL+ L R+NI YPMLFKLTN +
Sbjct: 19 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQK 78
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+TH GVLEF A EG+ LP+WMM+ L L +G+ V IES ++P ATF+K +P + +FL+I+
Sbjct: 79 VTHCGVLEFSAPEGQAILPHWMMQQLNLCDGDTVRIESATVPKATFAKLKPMSLEFLNIS 138
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
NPKAVLE LR +ACLT D I +Y + E V++ KP N+V IIECD+N+DF P G
Sbjct: 139 NPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDFDAPEG 198
Query: 387 YTE-PEKVKEKEEDNMI----------DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTV- 434
Y E P +V P+ + F G+G RLDGK+K +V
Sbjct: 199 YVEQPRQVTPAVNAKPPAPPASAFTGHAQAAKAAAPTTTI-FGGSGRRLDGKKKPTSSVS 257
Query: 435 ---ETGGTPTKREYQR----GIP----HYDYEPNTLVFLR 463
E G + + IP + DY+P + F+R
Sbjct: 258 LSSEAGASTSDAAAIANDLPAIPPVVVNEDYKPGRISFVR 297
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 9 FNRSYKCFSVSMFPGNERE---DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
+++++ + P + ++ GGKI++P SAL+ L R+NI YPMLFKLTN +
Sbjct: 19 YDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQK 78
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
+TH GVLEF A EG+ LP+W
Sbjct: 79 VTHCGVLEFSAPEGQAILPHW 99
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 100 DVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDG 148
++ GGKI++P SAL+ L R+NI YPMLFKLTN ++TH GVLE
Sbjct: 41 EINYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQKVTHCGVLEFSA 89
>gi|403413781|emb|CCM00481.1| predicted protein [Fibroporia radiculosa]
Length = 459
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 266
R + +K +SV+M P R+++ G+IIMPPSAL LT + + P +FKL N
Sbjct: 32 RAYQDYFKAYSVAMLP-RTRDNLNYVGQIIMPPSALANLTTMELESPWMFKLQNVTNSAA 90
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
T++GVLEF+A+EG V+LP WMM+ L LDEG+ + I LP K Q Q+ FL+I+
Sbjct: 91 STYAGVLEFIAEEGCVHLPQWMMKTLRLDEGDPIRITGAELPKGKMVKLQAQSTVFLEIS 150
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNVDFAPPV 385
+PKAVLE LR+F+ LT GD+I I+YNS ++ L V+ET PG ++++ D+ VDFAPPV
Sbjct: 151 DPKAVLEQALRHFSALTQGDIIEISYNSIVFGLLVMETHPGGEGISVLNTDLEVDFAPPV 210
Query: 386 GYTEPEKVKEKEEDNM-----ID-----PVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVE 435
GY EPE+ K M ID P P S F G+G R K D E
Sbjct: 211 GYVEPERPKAAPPPTMASKLNIDLNSQTPGSSRPSSSLGETFAGSGTRGAAVSKGGDHWE 270
Query: 436 T----GGTPTKREYQ-RGIPHYDYE 455
+ G T + R+ + +G+ H E
Sbjct: 271 SFKGKGETLSGRKTKGKGVSHRKVE 295
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 65
R + +K +SV+M P R+++ G+IIMPPSAL LT + + P +FKL N
Sbjct: 32 RAYQDYFKAYSVAMLP-RTRDNLNYVGQIIMPPSALANLTTMELESPWMFKLQNVTNSAA 90
Query: 66 ITHSGVLEFVADEGKVYLPYWCF 88
T++GVLEF+A+EG V+LP W
Sbjct: 91 STYAGVLEFIAEEGCVHLPQWMM 113
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 80 KVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 137
+ Y Y+ +SV+M P R+++ G+IIMPPSAL LT + + P +FKL N
Sbjct: 32 RAYQDYFKAYSVAMLP-RTRDNLNYVGQIIMPPSALANLTTMELESPWMFKLQNVTNSAA 90
Query: 138 ITHSGVLEL 146
T++GVLE
Sbjct: 91 STYAGVLEF 99
>gi|294935400|ref|XP_002781413.1| Ubiquitin fusion degradation protein, putative [Perkinsus marinus
ATCC 50983]
gi|239892016|gb|EER13208.1| Ubiquitin fusion degradation protein, putative [Perkinsus marinus
ATCC 50983]
Length = 245
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 114/146 (78%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
G KI++P SAL+QL RLN+ YPMLF+++N K R TH GVLEF A+EG Y+PYWMM+NL
Sbjct: 1 GNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTHCGVLEFTAEEGFCYIPYWMMQNL 60
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+L EG+LV +++VSLP K QP T DFL+I NP+A+LEN LRNFA LT+GD IAI Y
Sbjct: 61 VLQEGDLVRVKNVSLPKGRSVKLQPVTKDFLEIHNPRAILENSLRNFAALTAGDNIAIQY 120
Query: 353 NSKIYELCVLETKPGNAVTIIECDMN 378
N+K +E+ V+E KP NA++IIE D++
Sbjct: 121 NNKTFEIEVVECKPANAISIIEADVS 146
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
G KI++P SAL+QL RLN+ YPMLF+++N K R TH GVLEF A+EG Y+PYW
Sbjct: 1 GNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTHCGVLEFTAEEGFCYIPYW 55
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 104 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGK 149
G KI++P SAL+QL RLN+ YPMLF+++N K R TH GVLE +
Sbjct: 1 GNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTHCGVLEFTAE 46
>gi|440796369|gb|ELR17478.1| Ubiquitin fusion degradation protein 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 284
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 142/239 (59%), Gaps = 41/239 (17%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
+E +E GGK TRLNI YPMLF+L+ + GR+TH GVLEFVADEG YLP+
Sbjct: 4 KEKLENGGK-----------TRLNIEYPMLFELSGSQ-GRVTHCGVLEFVADEGLCYLPH 51
Query: 287 WMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGD 346
WMM+ LLL EG+L+N++S +LP T++K QP FLD+TNPKAVLEN LRN++ LT+GD
Sbjct: 52 WMMQQLLLTEGQLINVKSATLPKGTYTKLQPVDETFLDLTNPKAVLENALRNWSALTAGD 111
Query: 347 MIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAPPVGYTEPE------------ 391
+I INYN K YE+ VLE K P +A++IIE D+ VDFAP +
Sbjct: 112 VIIINYNKKNYEINVLEVKPDTPSHAISIIEADVMVDFAPSEDQLKKAEQARRQQLEKAA 171
Query: 392 --------KVKEKEEDNM--IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTP 440
K EKE +P +P+PS F G+G RLDG+ K ++ P
Sbjct: 172 VSSIKGKGKATEKEAPGAKPAEPEPEVPKPS----FPGSGFRLDGRSITKPAADSTRKP 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 12/61 (19%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 85
+E +E GGK TRLNI YPMLF+L+ + GR+TH GVLEFVADEG YLP+
Sbjct: 4 KEKLENGGK-----------TRLNIEYPMLFELSGSQ-GRVTHCGVLEFVADEGLCYLPH 51
Query: 86 W 86
W
Sbjct: 52 W 52
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 12/49 (24%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
+E +E GGK TRLNI YPMLF+L+ + GR+TH GVLE
Sbjct: 4 KEKLENGGK-----------TRLNIEYPMLFELSGSQ-GRVTHCGVLEF 40
>gi|399218176|emb|CCF75063.1| unnamed protein product [Babesia microti strain RI]
Length = 403
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 153/261 (58%), Gaps = 17/261 (6%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MFP +PF+ YKC+ VS F G++ +E G KI++P SAL L NI +PMLF++ N
Sbjct: 1 MFP-AQQPFSAEYKCYPVS-FIGHD--SMEHGNKILLPQSALNDLAMRNITWPMLFRVEN 56
Query: 262 QKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD 321
K THSGVLEF++DEG +LPYWMM+NL+L+ G+ V + +VSLP TF K +P + D
Sbjct: 57 PKKATKTHSGVLEFISDEGTCHLPYWMMQNLMLEIGDTVLVHNVSLPKGTFVKLKPLSMD 116
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
+ +I+NPKAVLE LRN+A LT GD+IAI+Y + +YE+ + + KP NA +IIE D+ V+F
Sbjct: 117 YWNISNPKAVLETSLRNYATLTVGDIIAIHYLNHVYEIKITDLKPANACSIIETDIEVEF 176
Query: 382 APPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGT-- 439
E + + + PS GT RLDG+ T
Sbjct: 177 ---------EDIPPPPQPKVPKLDHSTKSPSSVPTVIGT--RLDGRDPTTITNNRNANIE 225
Query: 440 PTKREYQRGIPHYDYEPNTLV 460
P K++ G+ Y+ E LV
Sbjct: 226 PWKKKIPHGVRTYNREYQQLV 246
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MFP +PF+ YKC+ VS F G++ +E G KI++P SAL L NI +PMLF++ N
Sbjct: 1 MFP-AQQPFSAEYKCYPVS-FIGHD--SMEHGNKILLPQSALNDLAMRNITWPMLFRVEN 56
Query: 61 QKMGRITHSGVLEFVADEGKVYLPYW 86
K THSGVLEF++DEG +LPYW
Sbjct: 57 PKKATKTHSGVLEFISDEGTCHLPYW 82
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G++ +E G KI++P SAL L NI +PMLF++ N K THSGVL
Sbjct: 12 YKCYPVS-FIGHD--SMEHGNKILLPQSALNDLAMRNITWPMLFRVENPKKATKTHSGVL 68
Query: 145 EL 146
E
Sbjct: 69 EF 70
>gi|389585783|dbj|GAB68513.1| ubiquitin fusion degradation protein, partial [Plasmodium cynomolgi
strain B]
Length = 295
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 148/246 (60%), Gaps = 28/246 (11%)
Query: 203 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
F +I PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 38 FLNISEPFTEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 94
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
+ THSGVLEF++DEG ++PYWMM+ L L EG++V + SVSLP TF K +P + DF
Sbjct: 95 YTEKRTHSGVLEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGTFVKLKPCSTDF 154
Query: 323 LDITNPKAV----------LENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTI 372
++++N +AV LE LRN+A LT GD I I+Y K YE+ +++ KP A TI
Sbjct: 155 MELSNHRAVYSYMGSGLRGLETALRNYATLTIGDNIVIHYLGKTYEIKIVDLKPAFACTI 214
Query: 373 IECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDG---KRK 429
IE D+ V+F PV Y + + E +PV + E S F G G R DG K
Sbjct: 215 IETDVEVEFEEPVDYNKSVQYVE-------EPVSV--EES---KFKGKGQRTDGKVCKTS 262
Query: 430 KKDTVE 435
KKD V+
Sbjct: 263 KKDKVK 268
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
F +I PF Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N
Sbjct: 38 FLNISEPFTEEYTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 94
Query: 62 KMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLN 121
+ THSGVLEF++DEG ++PYW + D+ R + +P +L
Sbjct: 95 YTEKRTHSGVLEFISDEGTCHMPYWMMQQLCL---KEGDIVRVTSVSLPKGT---FVKLK 148
Query: 122 ICYPMLFKLTNQK 134
C +L+N +
Sbjct: 149 PCSTDFMELSNHR 161
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G ++D+E G KII+P +AL L R +I +PMLF+++N + THSGVL
Sbjct: 49 YTCYPVS-FIG--KDDMENGNKIILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVL 105
Query: 145 EL 146
E
Sbjct: 106 EF 107
>gi|384498895|gb|EIE89386.1| hypothetical protein RO3G_14097 [Rhizopus delemar RA 99-880]
Length = 283
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 142/229 (62%), Gaps = 34/229 (14%)
Query: 208 RPFNRSYKCFSVSMFP-GNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
R F+ +Y+C+ ++M GN+R++V GGKII+P SALE+L C
Sbjct: 20 RGFSENYRCYPIAMMQHGNDRDNVNYGGKIILPQSALEKL-----C-------------- 60
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
VLEF+A+EG+VYLP WMM +L + G ++ +++V+LP+ +F + QPQ+ DFLDIT
Sbjct: 61 -----VLEFIAEEGRVYLPQWMMESLDTEPGNIIEVKNVTLPLGSFVRIQPQSTDFLDIT 115
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP----GNAVTIIECDMNVDFA 382
+ +AVLE LRNF+ LT D+I INYN KIY + VL KP + ++I+E D+ VDFA
Sbjct: 116 DHRAVLEKALRNFSTLTVEDIIQINYNDKIYGIKVLGVKPFYEDHSGISIVETDLEVDFA 175
Query: 383 PPVGYTEPEKVKEKEEDNMIDPVDLMPEPSG--FVAFHGTGNRLDGKRK 429
PP+GY E + + + M P+DL P+ + F AF G G L GK K
Sbjct: 176 PPIGYVESSQQTQTKTSQM--PIDL-PKTTKKIFTAFQGGGQSLRGKNK 221
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 26/92 (28%)
Query: 7 RPFNRSYKCFSVSMFP-GNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
R F+ +Y+C+ ++M GN+R++V GGKII+P SALE+L C
Sbjct: 20 RGFSENYRCYPIAMMQHGNDRDNVNYGGKIILPQSALEKL-----C-------------- 60
Query: 66 ITHSGVLEFVADEGKVYLPYWCF-SVSMFPGN 96
VLEF+A+EG+VYLP W S+ PGN
Sbjct: 61 -----VLEFIAEEGRVYLPQWMMESLDTEPGN 87
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 85 YWCFSVSMFP-GNEREDVERGGKIIMPPSALEQLTRL 120
Y C+ ++M GN+R++V GGKII+P SALE+L L
Sbjct: 26 YRCYPIAMMQHGNDRDNVNYGGKIILPQSALEKLCVL 62
>gi|406695719|gb|EKC99021.1| ubiquitin fusion-degradation 1-like protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 459
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 145/245 (59%), Gaps = 26/245 (10%)
Query: 210 FNRSYKCFSVS-MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGR 266
++ +K +SV+ M G+ER ++ GGKIIMPPSAL +LT L+I P F L N +
Sbjct: 41 YDDYFKAYSVATMQHGHERPELMYGGKIIMPPSALIKLTSLDIDSPWTFHLRNPRNPTEN 100
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
T++GVLEF+A+EG V+LP WMM+ L L+EG+ V + LP K Q Q+ DFL++
Sbjct: 101 QTYAGVLEFIAEEGIVHLPAWMMKKLNLNEGDPVRLTGAVLPKGKMVKIQAQSVDFLEVA 160
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPPV 385
+ KAVLE+ LR ++ LT GD+I I YNS ++E ++ET P G ++II+ D+ VDFAPPV
Sbjct: 161 DAKAVLESALRYYSALTKGDIIEITYNSLVFEFLIMETTPEGTGISIIDTDLEVDFAPPV 220
Query: 386 GYTEPEKVK-------------EKEEDNMIDP------VDLMPEPSG---FVAFHGTGNR 423
GY EPE+ + E +DP + + + SG +F G G
Sbjct: 221 GYVEPERKAPAPIPTMADKLKIDVGETTSVDPSRPVSSMSIRTQGSGDGPLESFTGVGQS 280
Query: 424 LDGKR 428
L GKR
Sbjct: 281 LSGKR 285
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 9 FNRSYKCFSVS-MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGR 65
++ +K +SV+ M G+ER ++ GGKIIMPPSAL +LT L+I P F L N +
Sbjct: 41 YDDYFKAYSVATMQHGHERPELMYGGKIIMPPSALIKLTSLDIDSPWTFHLRNPRNPTEN 100
Query: 66 ITHSGVLEFVADEGKVYLPYWCF 88
T++GVLEF+A+EG V+LP W
Sbjct: 101 QTYAGVLEFIAEEGIVHLPAWMM 123
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 85 YWCFSVS-MFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGRITHS 141
+ +SV+ M G+ER ++ GGKIIMPPSAL +LT L+I P F L N + T++
Sbjct: 45 FKAYSVATMQHGHERPELMYGGKIIMPPSALIKLTSLDIDSPWTFHLRNPRNPTENQTYA 104
Query: 142 GVLEL 146
GVLE
Sbjct: 105 GVLEF 109
>gi|392578193|gb|EIW71321.1| hypothetical protein TREMEDRAFT_67697 [Tremella mesenterica DSM
1558]
Length = 436
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 125/188 (66%), Gaps = 5/188 (2%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 266
P F+ Y+ +SV++ +R ++ GGKIIMP SAL +L+ L+I P F+L N +
Sbjct: 21 PDAFDEYYRAYSVAVMSQRDRIELLYGGKIIMPASALAKLSSLDIPGPWTFQLRNPRH-- 78
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
GVLEF+ADEG V+LP WMM+ L L+EG+ + + SLP K Q Q+ DFL ++
Sbjct: 79 --MPGVLEFIADEGNVHLPAWMMKTLQLEEGDPIRLTGASLPKGKLVKLQAQSTDFLQVS 136
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPPV 385
+P+AVLE+ LR ++ LT GD+I I YNS I+E VLET+P G+ +++I+ D+ VDFA P+
Sbjct: 137 DPRAVLESALRFYSTLTKGDIIEITYNSLIFEFAVLETQPEGSGISVIDTDLEVDFATPL 196
Query: 386 GYTEPEKV 393
GY EP +
Sbjct: 197 GYVEPPRA 204
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR 65
P F+ Y+ +SV++ +R ++ GGKIIMP SAL +L+ L+I P F+L N +
Sbjct: 21 PDAFDEYYRAYSVAVMSQRDRIELLYGGKIIMPASALAKLSSLDIPGPWTFQLRNPRH-- 78
Query: 66 ITHSGVLEFVADEGKVYLPYWCF 88
GVLEF+ADEG V+LP W
Sbjct: 79 --MPGVLEFIADEGNVHLPAWMM 99
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 132
Y +SV++ +R ++ GGKIIMP SAL +L+ L+I P F+L N
Sbjct: 28 YRAYSVAVMSQRDRIELLYGGKIIMPASALAKLSSLDIPGPWTFQLRN 75
>gi|403214668|emb|CCK69168.1| hypothetical protein KNAG_0C00540 [Kazachstania naganishii CBS
8797]
Length = 369
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 147/255 (57%), Gaps = 22/255 (8%)
Query: 204 PDIPRPFNRSYKCFSV-SMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 262
P + F +++C+ + +M ++ GGKI +P SAL +L+ LN+ YPMLF++ +
Sbjct: 16 PGMRDQFKETFRCYPIDAMNDRIKKPGANYGGKIFLPASALNKLSVLNVKYPMLFEILAR 75
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
+ GVLEF ++EG+VYLP WM R L + G LV + S +P F K +PQ+ DF
Sbjct: 76 ESNTRAFGGVLEFTSEEGRVYLPKWMFRGLGITVGGLVEVLSTDVPQGRFVKLEPQSTDF 135
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT---IIECDMNV 379
LDI++PKAVLE LRNF+ LT D+I INYN IY + +LE KP +A+ ++E D+
Sbjct: 136 LDISDPKAVLETALRNFSTLTVEDIIEINYNDTIYGIKILEVKPKSAIQSICVVETDLVT 195
Query: 380 DFAPPVGYTEPEKVKEK----------EEDNMIDPV-------DLMPEPSGFVAFHGTGN 422
DFAPP+GY EPE+ +K + + P+ +L+ + F G G
Sbjct: 196 DFAPPIGYVEPERFSDKIKAPVDKAAANSNRTLGPMSKRIKYNELLNTTNNESLFLGKGL 255
Query: 423 RLDGKR-KKKDTVET 436
+L GK+ K KD ET
Sbjct: 256 KLSGKQPKTKDDTET 270
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 3 PDIPRPFNRSYKCFSV-SMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 61
P + F +++C+ + +M ++ GGKI +P SAL +L+ LN+ YPMLF++ +
Sbjct: 16 PGMRDQFKETFRCYPIDAMNDRIKKPGANYGGKIFLPASALNKLSVLNVKYPMLFEILAR 75
Query: 62 KMGRITHSGVLEFVADEGKVYLPYWCF 88
+ GVLEF ++EG+VYLP W F
Sbjct: 76 ESNTRAFGGVLEFTSEEGRVYLPKWMF 102
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 104 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
GGKI +P SAL +L+ LN+ YPMLF++ ++ GVLE
Sbjct: 46 GGKIFLPASALNKLSVLNVKYPMLFEILARESNTRAFGGVLEF 88
>gi|349802377|gb|AEQ16661.1| putative ubiquitin fusion degradation protein 1 [Pipa carvalhoi]
Length = 188
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 120/172 (69%), Gaps = 15/172 (8%)
Query: 309 VATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN 368
VAT+SKFQPQ DFLDITNPKAVL N LRNFACLT+GD+IAINYN KIYEL V+ETKP
Sbjct: 1 VATYSKFQPQCPDFLDITNPKAVLGNALRNFACLTTGDVIAINYNEKIYELRVMETKPDK 60
Query: 369 AVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPS------GFVAFHGTGN 422
AV+IIECDMNVDF P+GY EPE+ ++E P + P+ S GF AF G+GN
Sbjct: 61 AVSIIECDMNVDFDAPLGYKEPERYSHQKE-----PTETEPDHSEYAADLGFRAFSGSGN 115
Query: 423 RLDGKRKKKDTVETGGTPTKRE-YQRGIPHYDYEPNTLVFLRNIKPASAHKE 473
RLDGK+K ++ +P K E +RGIP+YD++ + +RN +P + E
Sbjct: 116 RLDGKKK---GIDPSPSPLKPEDIRRGIPNYDFKIGRITLIRNSRPQTKKVE 164
>gi|147799654|emb|CAN70718.1| hypothetical protein VITISV_024234 [Vitis vinifera]
Length = 497
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 147/272 (54%), Gaps = 43/272 (15%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 79 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 135
Query: 270 SGVLEFVADEGKVYLPYW------------------------MMRNLLLDEGELVNIESV 305
GVLEF+A+EG +Y+PYW MM N+LL EG+ V
Sbjct: 136 CGVLEFIAEEGMIYMPYWVSFTTADVSRALIPVVILLIVSCQMMENMLLQEGDTVQ---- 191
Query: 306 SLPVATFSKFQPQTCDFLD--ITNPKAV-LENCLRNFACLTSGDMIAINYNSKIYELCVL 362
P + LD P+ V LE LRNF+CLT+GD I + YN+K Y + ++
Sbjct: 192 --PHKGMDVLNIEAAAVLDGFFPTPRWVSLETTLRNFSCLTTGDSIMVAYNNKKYYIDIV 249
Query: 363 ETKPGNAVTIIECDMNVDFAPPVGYTEPEK----VKEKEEDNMIDPVDLMPEPSGFVAFH 418
ETKP NA++IIE D VDFAPP+ EPEK V + + + PEP F F
Sbjct: 250 ETKPSNAISIIETDCEVDFAPPLDXKEPEKPVAPVPLGKAAAEVQEAPVEPEPK-FNPFC 308
Query: 419 GTGNRLDGKRKKKD--TVETGGTPTKREYQRG 448
G G RLDGK +K + V + G+ KR RG
Sbjct: 309 GVGRRLDGKPQKYEPPPVSSSGSKDKRPVNRG 340
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H
Sbjct: 79 FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSH 135
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF+A+EG +Y+PYW
Sbjct: 136 CGVLEFIAEEGMIYMPYW 153
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ S ++ +E GGKIIMPPSAL++L L+I YPMLF+L+N R++H GVL
Sbjct: 83 YRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVL 139
Query: 145 EL 146
E
Sbjct: 140 EF 141
>gi|281200974|gb|EFA75188.1| ubiquitin fusion degradation protein UFD1 family protein
[Polysphondylium pallidum PN500]
Length = 345
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 142/250 (56%), Gaps = 30/250 (12%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
FN++Y ++++ + +E GGKI++PPSAL L+RL+I +PM F+++N R +H
Sbjct: 28 FNQNYCVMNIAI---AGKAHLESGGKILLPPSALNTLSRLHIQFPMQFEISNTDKHRSSH 84
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG Y+P WMM NL L + ++V I+S +LP F K QP T FL+ NPK
Sbjct: 85 CGVLEFTAEEGVCYMPKWMMNNLQLKDQDIVTIKSATLPNGQFVKIQPHTQAFLETANPK 144
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAPPVG 386
A+LEN LR FA LT + I YN+K Y L VLE K P NA++IIE D++VDFAPP+
Sbjct: 145 AILENALRKFATLTKAEDFVIEYNNKNYTLRVLEIKPVNPSNAISIIETDISVDFAPPLD 204
Query: 387 YTEPEKVKEKE----EDNMIDPVDLMPEPSG-------------------FVAFHGTGNR 423
++PE+ + + L+P S F AF GT R
Sbjct: 205 -SKPEETYKPQTTGFTFGTTSVAKLIPPGSSKKPQNDSDEEESSDEDEPKFKAFGGTAAR 263
Query: 424 LDGKRKKKDT 433
LDGK T
Sbjct: 264 LDGKSGTPST 273
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
FN++Y ++++ + +E GGKI++PPSAL L+RL+I +PM F+++N R +H
Sbjct: 28 FNQNYCVMNIAI---AGKAHLESGGKILLPPSALNTLSRLHIQFPMQFEISNTDKHRSSH 84
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG Y+P W
Sbjct: 85 CGVLEFTAEEGVCYMPKW 102
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGK 149
+ +E GGKI++PPSAL L+RL+I +PM F+++N R +H GVLE +
Sbjct: 42 KAHLESGGKILLPPSALNTLSRLHIQFPMQFEISNTDKHRSSHCGVLEFTAE 93
>gi|358060029|dbj|GAA94088.1| hypothetical protein E5Q_00735 [Mixia osmundae IAM 14324]
Length = 515
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 147/266 (55%), Gaps = 37/266 (13%)
Query: 210 FNRSYKCFSVSMFP------------GNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 257
F ++Y+ +S ++F G R ++ GGKI+MPP AL+ LT L++ P F
Sbjct: 124 FRQNYRAYSTAVFEIREGRADGTGVHGQGRANLMYGGKILMPPEALQMLTDLDLESPWNF 183
Query: 258 KLTNQKMGRI-THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
++ N + + TH GVLEF+A G V+LP WMM L L+EG+ V I LP F K Q
Sbjct: 184 EIINARHQDLSTHGGVLEFIAGPGTVHLPGWMMTKLQLNEGDQVRINGAKLPKGKFIKVQ 243
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECD 376
Q+ FL++++ KAVLE LRN+A LT+GD+I I YN +E+ ++ETKP A+++ E D
Sbjct: 244 AQSVLFLELSDHKAVLEQALRNYATLTAGDIIEIGYNGMTFEILIMETKPEGAISVFETD 303
Query: 377 MNVDFAPPVGYTEPEK----------VKEKEEDNMIDPVDLMPEP---------SGFVAF 417
+ VDFA P GY EPE+ K + + VD + + F +F
Sbjct: 304 IEVDFAAPKGYVEPERKPAPPAPTMASKLGIDISATQDVDAKGQATNGSSSAAQAAFNSF 363
Query: 418 HGTGNRLDGKRKKKDTVETGGTPTKR 443
G+GN L GKR V+ GT TK+
Sbjct: 364 VGSGNTLAGKR-----VKGKGTSTKK 384
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
Query: 9 FNRSYKCFSVSMFP------------GNEREDVERGGKIIMPPSALEQLTRLNICYPMLF 56
F ++Y+ +S ++F G R ++ GGKI+MPP AL+ LT L++ P F
Sbjct: 124 FRQNYRAYSTAVFEIREGRADGTGVHGQGRANLMYGGKILMPPEALQMLTDLDLESPWNF 183
Query: 57 KLTNQKMGRI-THSGVLEFVADEGKVYLPYWCFS 89
++ N + + TH GVLEF+A G V+LP W +
Sbjct: 184 EIINARHQDLSTHGGVLEFIAGPGTVHLPGWMMT 217
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 95 GNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI-THSGVLEL 146
G R ++ GGKI+MPP AL+ LT L++ P F++ N + + TH GVLE
Sbjct: 150 GQGRANLMYGGKILMPPEALQMLTDLDLESPWNFEIINARHQDLSTHGGVLEF 202
>gi|156085254|ref|XP_001610110.1| ubiquitin fusion degradation protein [Babesia bovis T2Bo]
gi|154797362|gb|EDO06542.1| ubiquitin fusion degradation protein, putative [Babesia bovis]
Length = 258
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 143/243 (58%), Gaps = 30/243 (12%)
Query: 209 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
PF Y+C+ VS F G ++ +E G KI MP SAL +L NI +PM+F+L N++ R T
Sbjct: 22 PFLVRYRCYPVS-FLG--KDAMESGNKICMPASALNELASRNITWPMMFELRNEERKRST 78
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H+GVLEF+++EG ++PYWMM++L L EG+ + I +V LP A + KF+P ++ DI+NP
Sbjct: 79 HAGVLEFISEEGMCHIPYWMMQHLQLQEGDYLTIRNVRLPKANWVKFRPLNDNYWDISNP 138
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT 388
KAVLE LRNFA LT GD I I+Y S +YEL V++ +P +A IIE DM V+FA
Sbjct: 139 KAVLETALRNFATLTIGDRIPIHYLSNVYELDVMDLRPADACCIIETDMEVEFAE----- 193
Query: 389 EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRG 448
+K++ ++ PV G RLDG K + + + R
Sbjct: 194 -----TKKKKPQLVQPV--------------PGKRLDG---KTPVLRQKDLEAAKPWLRR 231
Query: 449 IPH 451
IPH
Sbjct: 232 IPH 234
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
PF Y+C+ VS F G ++ +E G KI MP SAL +L NI +PM+F+L N++ R T
Sbjct: 22 PFLVRYRCYPVS-FLG--KDAMESGNKICMPASALNELASRNITWPMMFELRNEERKRST 78
Query: 68 HSGVLEFVADEGKVYLPYW 86
H+GVLEF+++EG ++PYW
Sbjct: 79 HAGVLEFISEEGMCHIPYW 97
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G ++ +E G KI MP SAL +L NI +PM+F+L N++ R TH+GVL
Sbjct: 27 YRCYPVS-FLG--KDAMESGNKICMPASALNELASRNITWPMMFELRNEERKRSTHAGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|449017007|dbj|BAM80409.1| similar to ubiquitin fusion-degradation protein 1 [Cyanidioschyzon
merolae strain 10D]
Length = 336
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 201 NMFPDI-------PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
NM PD RP R + FS++ F R + E G KI++P S L +L + N
Sbjct: 4 NMLPDDVVGPLRPARPVRRQLESFSLA-FSNAARPEYELGDKILLPQSLLAELIQWNTED 62
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PM+F++ Q+ R+TH GV+EF A+EGK YLP+W+M+NL L EG++V +E+ SLP A +
Sbjct: 63 PMIFRVQAQRSERVTHVGVIEFTAEEGKCYLPHWLMQNLALQEGDVVQLETASLPKARYV 122
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
K QP +F +TNP+AVLE LR++ LT GD IAI YN K++ L V+ +P +AV +
Sbjct: 123 KLQPHLTEFTQMTNPRAVLETRLRHYTALTEGDEIAIEYNGKMFWLTVIACEPASAVCVT 182
Query: 374 ECDMNVDFAPP 384
+ D++V+FAPP
Sbjct: 183 DTDVSVEFAPP 193
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
RP R + FS++ F R + E G KI++P S L +L + N PM+F++ Q+ R+
Sbjct: 18 RPVRRQLESFSLA-FSNAARPEYELGDKILLPQSLLAELIQWNTEDPMIFRVQAQRSERV 76
Query: 67 THSGVLEFVADEGKVYLPYW 86
TH GV+EF A+EGK YLP+W
Sbjct: 77 THVGVIEFTAEEGKCYLPHW 96
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
FS++ F R + E G KI++P S L +L + N PM+F++ Q+ R+TH GV+E
Sbjct: 26 SFSLA-FSNAARPEYELGDKILLPQSLLAELIQWNTEDPMIFRVQAQRSERVTHVGVIEF 84
Query: 147 DGKRKK 152
+ K
Sbjct: 85 TAEEGK 90
>gi|290998001|ref|XP_002681569.1| ubiquitin fusion degradation protein domain-containing protein
[Naegleria gruberi]
gi|284095194|gb|EFC48825.1| ubiquitin fusion degradation protein domain-containing protein
[Naegleria gruberi]
Length = 346
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 123/180 (68%), Gaps = 7/180 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F R Y+ ++ F G + ++ GGKII+P SAL++L RLNI YPMLFK++N K + TH
Sbjct: 14 FKRPYRVYT-GAFCG--KPQIDEGGKIILPSSALDELARLNIVYPMLFKISNSKKKKATH 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG+ Y+P+WM L L G LVN+ESV+LP TF K +PQ F++I++PK
Sbjct: 71 CGVLEFSAEEGRAYIPFWMQEYLQLSPGSLVNVESVALPKGTFVKIRPQQKAFIEISDPK 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIY--ELCVLETKPGN--AVTIIECDMNVDFAPPV 385
AVLE LRNF+CL+ GD I I YN+K + ++ + + G+ AV+I+E D+ V+F P
Sbjct: 131 AVLEKQLRNFSCLSRGDTIIIAYNNKQFFIDIVAVASASGDCEAVSIVETDVKVEFERPA 190
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F R Y+ ++ F G + ++ GGKII+P SAL++L RLNI YPMLFK++N K + TH
Sbjct: 14 FKRPYRVYT-GAFCG--KPQIDEGGKIILPSSALDELARLNIVYPMLFKISNSKKKKATH 70
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A+EG+ Y+P+W
Sbjct: 71 CGVLEFSAEEGRAYIPFW 88
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 101 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGK 149
++ GGKII+P SAL++L RLNI YPMLFK++N K + TH GVLE +
Sbjct: 31 IDEGGKIILPSSALDELARLNIVYPMLFKISNSKKKKATHCGVLEFSAE 79
>gi|164655576|ref|XP_001728917.1| hypothetical protein MGL_3911 [Malassezia globosa CBS 7966]
gi|159102805|gb|EDP41703.1| hypothetical protein MGL_3911 [Malassezia globosa CBS 7966]
Length = 385
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 120/200 (60%), Gaps = 20/200 (10%)
Query: 194 KEFQFGFNM-FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC 252
+F GF+ FP + +K + +S FPG ER+DV GGK+IMPPSAL +T L +
Sbjct: 24 SDFMSGFDRRFPAPLDAYEDYFKAYHMSRFPGRERKDVSYGGKVIMPPSALSTITDLELE 83
Query: 253 YPMLFKL--TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVA 310
P F T + + TH+GV+EF+A+EGKVYLP W R LP
Sbjct: 84 SPWTFAFRGTGRSRSQRTHAGVVEFIAEEGKVYLPSWGTR----------------LPKG 127
Query: 311 TFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNA 369
F K QPQT DFL+I++PKAVLE LRN+ LT GD+I I+YN +E+ ++E +P
Sbjct: 128 KFVKLQPQTVDFLEISDPKAVLEQALRNYPTLTKGDIIEISYNCLTFEILIMEVQPDAEG 187
Query: 370 VTIIECDMNVDFAPPVGYTE 389
+TIIE D+ VDFAPP GY E
Sbjct: 188 ITIIETDLEVDFAPPKGYVE 207
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 2 FPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--T 59
FP + +K + +S FPG ER+DV GGK+IMPPSAL +T L + P F T
Sbjct: 34 FPAPLDAYEDYFKAYHMSRFPGRERKDVSYGGKVIMPPSALSTITDLELESPWTFAFRGT 93
Query: 60 NQKMGRITHSGVLEFVADEGKVYLPYW 86
+ + TH+GV+EF+A+EGKVYLP W
Sbjct: 94 GRSRSQRTHAGVVEFIAEEGKVYLPSW 120
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--TNQKMGRITHSGVL 144
+ +S FPG ER+DV GGK+IMPPSAL +T L + P F T + + TH+GV+
Sbjct: 47 AYHMSRFPGRERKDVSYGGKVIMPPSALSTITDLELESPWTFAFRGTGRSRSQRTHAGVV 106
Query: 145 ELDGKRKK 152
E + K
Sbjct: 107 EFIAEEGK 114
>gi|403332413|gb|EJY65225.1| Ubiquitin fusion degradaton protein, putative [Oxytricha trifallax]
Length = 262
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F RSYK +S + F N D+ +G KII+P SAL +L RL+I YPM+F ++N +M + T+
Sbjct: 29 FLRSYKAYSPAFFGKN---DINKGNKIILPSSALHELARLSISYPMIFMISNPQMAKKTY 85
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF A+EG YLPYWMM NL L+EG + + +V+L F QP F+D+ NPK
Sbjct: 86 CGVLEFSAEEGLCYLPYWMMNNLFLEEGSEIILRNVTLRKGNFVTIQPHETAFIDLANPK 145
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
A+LE L N++CL GD I INY K + + +++ KP + + ++E D+ V+F P+ Y E
Sbjct: 146 AILEQELTNYSCLMKGDTININYQGKDFLIDIVDCKPDDQICVVEADIEVEFKAPLDYKE 205
Query: 390 PEKVKEKEEDNMID 403
VK++ ++ D
Sbjct: 206 VPLVKKQSHFSIDD 219
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 11/101 (10%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F RSYK +S + F N D+ +G KII+P SAL +L RL+I YPM+F ++N +M + T+
Sbjct: 29 FLRSYKAYSPAFFGKN---DINKGNKIILPSSALHELARLSISYPMIFMISNPQMAKKTY 85
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIM 109
GVLEF A+EG YLPYW + ++F +E G +II+
Sbjct: 86 CGVLEFSAEEGLCYLPYWMMN-NLF-------LEEGSEIIL 118
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 80 KVYL-PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 138
+V+L Y +S + F N D+ +G KII+P SAL +L RL+I YPM+F ++N +M +
Sbjct: 27 QVFLRSYKAYSPAFFGKN---DINKGNKIILPSSALHELARLSISYPMIFMISNPQMAKK 83
Query: 139 THSGVLELDGK 149
T+ GVLE +
Sbjct: 84 TYCGVLEFSAE 94
>gi|71030908|ref|XP_765096.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352052|gb|EAN32813.1| hypothetical protein TP02_0530 [Theileria parva]
Length = 260
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 159/275 (57%), Gaps = 30/275 (10%)
Query: 194 KEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY 253
+ F G N++ + N Y+CFSVS F G RE +E+G KI++P SAL +L NI +
Sbjct: 8 ENFWSGGNIYQNAAHTSN--YRCFSVS-FAG--RESMEQGNKILLPQSALHELASRNISW 62
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
PM+F++ N K + T+ GVLEF+++EG +PYW R L+ +V I +VSLP AT+
Sbjct: 63 PMMFEILNPKNYKRTNGGVLEFISEEGTCNIPYWA-RFLI----NVVTITNVSLPKATWV 117
Query: 314 KFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII 373
K +P D+ DI+NP+AVLEN LRN+A LT GD+I I+Y IY +++ KP A +II
Sbjct: 118 KLKPLNEDYWDISNPRAVLENALRNYATLTVGDVIPIHYIQTIYLFHIMDLKPAKACSII 177
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK--RKKK 431
E DM V+F PV PE KE+E D DP ++ G RLDGK R K
Sbjct: 178 ETDMEVEFDMPV----PEP-KEEENDMETDPEPII------------GKRLDGKTPRLAK 220
Query: 432 DTVETGG-TPTKREYQRGIPHYDYEPNTLVFLRNI 465
T +T TP K + GI YD E +V R I
Sbjct: 221 PTPDTTNKTPWKNKLPNGIRVYDEEYERMVRNRRI 255
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Query: 12 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 71
+Y+CFSVS F G RE +E+G KI++P SAL +L NI +PM+F++ N K + T+ GV
Sbjct: 25 NYRCFSVS-FAG--RESMEQGNKILLPQSALHELASRNISWPMMFEILNPKNYKRTNGGV 81
Query: 72 LEFVADEGKVYLPYWC 87
LEF+++EG +PYW
Sbjct: 82 LEFISEEGTCNIPYWA 97
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CFSVS F G RE +E+G KI++P SAL +L NI +PM+F++ N K + T+ GVL
Sbjct: 26 YRCFSVS-FAG--RESMEQGNKILLPQSALHELASRNISWPMMFEILNPKNYKRTNGGVL 82
Query: 145 EL 146
E
Sbjct: 83 EF 84
>gi|374256025|gb|AEZ00874.1| putative ubiquitin fusion degradation protein, partial [Elaeis
guineensis]
Length = 252
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
GVLEF+A+EG +Y+PYWMM+NLLL EG+ V +++ +LP T+ K QP T DFLDI+NPKA
Sbjct: 1 GVLEFIAEEGMIYMPYWMMQNLLLQEGDTVRVKNATLPKGTYVKLQPHTKDFLDISNPKA 60
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEP 390
+LE LR+F+CLT+GD I + YN+K Y + ++ETKP +A++IIE D VDFAPP+ Y EP
Sbjct: 61 ILETTLRSFSCLTTGDSIMVAYNNKKYYIDIVETKPASAISIIETDCEVDFAPPLDYKEP 120
Query: 391 EKVKEKEEDNMIDPVDLMPEPSG----FVAFHGTGNRLDGKRKK 430
E+ + PV + + F F G G RLDGK K
Sbjct: 121 EQPLQPSIPPSKAPVQVQEAEADAGPKFSPFTGIGRRLDGKPSK 164
>gi|242052119|ref|XP_002455205.1| hypothetical protein SORBIDRAFT_03g006250 [Sorghum bicolor]
gi|241927180|gb|EES00325.1| hypothetical protein SORBIDRAFT_03g006250 [Sorghum bicolor]
Length = 287
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 134/221 (60%), Gaps = 12/221 (5%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
R F + Y+C +S+ E D E G ++IMP SAL++L RLN YPMLF++ N R+
Sbjct: 12 RTFVQYYRCLPLSLLK-KENAD-EDGNRVIMPLSALDRLERLNAQYPMLFQIKNPSTERV 69
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH GV F A+EG +++P W+M +L + E E+V + S SLP ATF K QP T DFL+++
Sbjct: 70 THCGVSVFSANEGFIHMPSWLMTHLGVVENEIVLVRSTSLPTATFIKLQPHTKDFLNVSY 129
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY 387
P+ +LE R F C+T+G+ IA+ + Y L VLE +P +AV ++ D VDFAPP+ Y
Sbjct: 130 PRELLEYNFRKFPCVTAGETIAVTEGERWYYLDVLEAQPADAVCSLDTDCAVDFAPPLDY 189
Query: 388 TE-PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
E P +V ++ +D EP+ F G R+DGK
Sbjct: 190 VEPPPRVVASQQGGSVD------EPARFT---GVAARMDGK 221
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
R F + Y+C +S+ E D E G ++IMP SAL++L RLN YPMLF++ N R+
Sbjct: 12 RTFVQYYRCLPLSLLK-KENAD-EDGNRVIMPLSALDRLERLNAQYPMLFQIKNPSTERV 69
Query: 67 THSGVLEFVADEGKVYLPYWCFS 89
TH GV F A+EG +++P W +
Sbjct: 70 THCGVSVFSANEGFIHMPSWLMT 92
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 73 EFVADEGKVYLPYW-CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 131
E++ + + ++ Y+ C +S+ E D E G ++IMP SAL++L RLN YPMLF++
Sbjct: 5 EYLNLQSRTFVQYYRCLPLSLLK-KENAD-EDGNRVIMPLSALDRLERLNAQYPMLFQIK 62
Query: 132 NQKMGRITHSGV 143
N R+TH GV
Sbjct: 63 NPSTERVTHCGV 74
>gi|321255059|ref|XP_003193295.1| ubiquitin fusion-degradation 1-like protein [Cryptococcus gattii
WM276]
gi|317459765|gb|ADV21508.1| Ubiquitin fusion-degradation 1-like protein, putative [Cryptococcus
gattii WM276]
Length = 483
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 140/235 (59%), Gaps = 11/235 (4%)
Query: 199 GFNMFPDIPRP--FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
GF F P P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P
Sbjct: 35 GFGGFHSAPPPSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWT 94
Query: 257 FKLTNQK--MGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
F+L N + TH+GVLEF+A+EG V+LP WMM+ L L+EG+ V + LP K
Sbjct: 95 FQLRNPRSPTQHTTHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPVRLTGAKLPKGKMVK 154
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTII 373
Q Q+ DFL +++PK+VLE+ LR ++ L+ D+I I YNS +E ++ P G +++I
Sbjct: 155 IQAQSTDFLQVSDPKSVLESALRFYSTLSPNDIIEITYNSLTFEFLIMSVVPEGPGISVI 214
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL-----MPEPSGFVAFHGTGNR 423
+ D+ VDFA P GY EP + + K M D +++ P SG + G G+R
Sbjct: 215 DTDLEVDFATPKGYVEPPRPEPKPIPTMADKLNIDLSSNEPTASGAASVSG-GSR 268
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--M 63
P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N +
Sbjct: 45 PSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPT 104
Query: 64 GRITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LP W
Sbjct: 105 QHTTHAGVLEFIAEEGIVHLPAWMM 129
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGRITHSG 142
+ +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N + TH+G
Sbjct: 52 FKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQHTTHAG 111
Query: 143 VLEL 146
VLE
Sbjct: 112 VLEF 115
>gi|443924912|gb|ELU43858.1| ubiquitin fusion degradation protein I [Rhizoctonia solani AG-1 IA]
Length = 859
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 37/257 (14%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 266
R ++ K +S++M PG ER +V GGKI++PPS+L L+ L++ P F+L N
Sbjct: 30 RTYDEYMKAYSMAMLPGRERANVSYGGKIMLPPSSLANLSDLDLESPWFFQLKNPSNQAA 89
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
TH+GVLEF+A+EG +LP+WMM+ L L+EG+ + I + +LP F K Q Q +F++++
Sbjct: 90 TTHAGVLEFIAEEGCAHLPHWMMKTLRLNEGDPIRITNTTLPKGQFVKIQAQEKEFIEVS 149
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-------AVTIIECDMNV 379
+PKAV LRNFA LT GD+ I YN + V+E KP + II+ D+ V
Sbjct: 150 DPKAV---SLRNFAALTQGDIFEIQYNMLTFSFLVMELKPDQPTGGGPAGINIIDTDLEV 206
Query: 380 DFAPPVGYTEPEKVKEKEEDNMID--PVDL------------------------MPEPSG 413
DFA P GY EP + M + +DL P G
Sbjct: 207 DFATPKGYVEPVRTPAAPPPTMAEKLKIDLGGSTPGSSRPGSSLGIAGPSAGPSADAPGG 266
Query: 414 FVAFHGTGNRLDGKRKK 430
F F G+G L G++ K
Sbjct: 267 FDPFKGSGQTLAGRKTK 283
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGR 65
R ++ K +S++M PG ER +V GGKI++PPS+L L+ L++ P F+L N
Sbjct: 30 RTYDEYMKAYSMAMLPGRERANVSYGGKIMLPPSSLANLSDLDLESPWFFQLKNPSNQAA 89
Query: 66 ITHSGVLEFVADEGKVYLPYW 86
TH+GVLEF+A+EG +LP+W
Sbjct: 90 TTHAGVLEFIAEEGCAHLPHW 110
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN-QKMGRITHSGVLE 145
+S++M PG ER +V GGKI++PPS+L L+ L++ P F+L N TH+GVLE
Sbjct: 38 AYSMAMLPGRERANVSYGGKIMLPPSSLANLSDLDLESPWFFQLKNPSNQAATTHAGVLE 97
Query: 146 L 146
Sbjct: 98 F 98
>gi|405119452|gb|AFR94224.1| ubiquitin fusion degradation protein 1 [Cryptococcus neoformans
var. grubii H99]
Length = 483
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 131/214 (61%), Gaps = 5/214 (2%)
Query: 199 GFNMFPDIPRP--FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
GF F P P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P
Sbjct: 35 GFGGFHSAPPPSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWT 94
Query: 257 FKLTNQK--MGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
F+L N + TH+GVLEF+A+EG V+LP WMM+ L L+EG+ V + LP K
Sbjct: 95 FQLRNPRSPTQHTTHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPVRLTGAKLPKGKMVK 154
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTII 373
Q Q DFL +++PK+VLE+ LR ++ L+ D+I I YNS +E ++ P G +++I
Sbjct: 155 IQAQNTDFLQVSDPKSVLESALRFYSTLSPDDIIEITYNSLTFEFLIMSVVPEGPGISVI 214
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
+ D+ VDFA P GY EP + + K M D +++
Sbjct: 215 DTDLEVDFATPKGYVEPPRPEPKPIPTMADKLNI 248
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--M 63
P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N +
Sbjct: 45 PSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPT 104
Query: 64 GRITHSGVLEFVADEGKVYLPYWCF 88
TH+GVLEF+A+EG V+LP W
Sbjct: 105 QHTTHAGVLEFIAEEGIVHLPAWMM 129
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGRITHSG 142
+ +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N + TH+G
Sbjct: 52 FKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQHTTHAG 111
Query: 143 VLEL 146
VLE
Sbjct: 112 VLEF 115
>gi|58261536|ref|XP_568178.1| ubiquitin fusion-degradation 1-like protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134115401|ref|XP_773662.1| hypothetical protein CNBI0280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256289|gb|EAL19015.1| hypothetical protein CNBI0280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230260|gb|AAW46661.1| ubiquitin fusion-degradation 1-like protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 516
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 199 GFNMFPDIPRP--FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPML 256
GF F P P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P
Sbjct: 70 GFGGFHSAPPPSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWT 129
Query: 257 FKLTNQK--MGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSK 314
F+L N + ITH+GVLEF+A+EG V+LP WMM+ L L+EG+ + + LP K
Sbjct: 130 FQLRNPRSPTQHITHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPIRLTGAKLPKGKMVK 189
Query: 315 FQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTII 373
Q Q DFL +++PK+VLE+ LR ++ L+ D+I I YNS +E ++ P G +++I
Sbjct: 190 IQAQNTDFLQVSDPKSVLESALRFYSTLSPDDIIEITYNSLTFEFLIMSVVPEGPGISVI 249
Query: 374 ECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
+ D+ VDFA P GY EP + + K M D +++
Sbjct: 250 DTDLEVDFATPKGYVEPPRPEPKPIPTMADKLNI 283
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--M 63
P ++ +K +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N +
Sbjct: 80 PSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPT 139
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
ITH+GVLEF+A+EG V+LP W
Sbjct: 140 QHITHAGVLEFIAEEGIVHLPAW 162
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK--MGRITHSG 142
+ +S ++ G ER +V GGKIIMPPSAL +L+ L+I P F+L N + ITH+G
Sbjct: 87 FKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQHITHAG 146
Query: 143 VLEL 146
VLE
Sbjct: 147 VLEF 150
>gi|403172020|ref|XP_003331180.2| hypothetical protein PGTG_13143 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169675|gb|EFP86761.2| hypothetical protein PGTG_13143 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 470
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 123/199 (61%), Gaps = 13/199 (6%)
Query: 208 RPFNRSYKCFSVSMFPGNE--------REDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
R F+++YK +S ++ + R +V GGKIIMP AL QLT +++ P +F++
Sbjct: 78 RAFSKTYKAYSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVQLTEMDMESPFMFEI 137
Query: 260 TNQ---KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQ 316
N K TH GVLEF+AD G V+LP WMM L L+EG+ + + LP F+K Q
Sbjct: 138 RNSSPTKRDLFTHCGVLEFIADPGTVHLPQWMMTRLELNEGDSIKLTGARLPKGKFAKVQ 197
Query: 317 PQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA--VTIIE 374
Q+ FL++ + KAVLE LRNF+CLT GD+I I +N +E+ ++E KP +A V+I E
Sbjct: 198 AQSTLFLELGDHKAVLETALRNFSCLTKGDIIEIYHNMMTFEILIMELKPDDAPGVSIFE 257
Query: 375 CDMNVDFAPPVGYTEPEKV 393
D+ VDFA P+GY EP V
Sbjct: 258 TDLEVDFAAPLGYVEPTPV 276
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 7 RPFNRSYKCFSVSMFPGNE--------REDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
R F+++YK +S ++ + R +V GGKIIMP AL QLT +++ P +F++
Sbjct: 78 RAFSKTYKAYSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVQLTEMDMESPFMFEI 137
Query: 59 TNQ---KMGRITHSGVLEFVADEGKVYLPYWCFS 89
N K TH GVLEF+AD G V+LP W +
Sbjct: 138 RNSSPTKRDLFTHCGVLEFIADPGTVHLPQWMMT 171
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 58 LTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPG-----NEREDVERGGKIIMPPS 112
L NQ MG H + K Y Y + + G R +V GGKIIMP
Sbjct: 60 LGNQMMGYGGHPSMRPPARAFSKTYKAYSTAILEIKQGRGERTGGRSNVMHGGKIIMPQD 119
Query: 113 ALEQLTRLNICYPMLFKLTNQ---KMGRITHSGVLEL 146
AL QLT +++ P +F++ N K TH GVLE
Sbjct: 120 ALVQLTEMDMESPFMFEIRNSSPTKRDLFTHCGVLEF 156
>gi|330038906|ref|XP_003239736.1| ubiquitin fusion degradation protein [Cryptomonas paramecium]
gi|327206661|gb|AEA38838.1| ubiquitin fusion degradation protein [Cryptomonas paramecium]
Length = 193
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 267
+ F KC+S+++ ++ + + K+I+P S LE++ + N+ +P++FK+ N +
Sbjct: 11 KKFCFQLKCYSINLI---KKFNKTKENKMILPISVLEEVNKFNLKWPLIFKIKNNLYQKE 67
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH G+LEF +DEG Y+P+W+++NL EGE + E + L + K QPQT DF+ ++N
Sbjct: 68 THCGILEFTSDEGCAYIPHWILKNLFSTEGETLFFEHIELEKGNYVKIQPQTKDFIKVSN 127
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
P+AVLE LR F CLT D+I INYN++IY L +L+ KPGNA++I++ D+NVDF P
Sbjct: 128 PRAVLETSLRTFVCLTKKDLICINYNNRIYWLNILDVKPGNAISILDTDINVDFILP 184
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI 66
+ F KC+S+++ ++ + + K+I+P S LE++ + N+ +P++FK+ N +
Sbjct: 11 KKFCFQLKCYSINLI---KKFNKTKENKMILPISVLEEVNKFNLKWPLIFKIKNNLYQKE 67
Query: 67 THSGVLEFVADEGKVYLPYWCFSVSMFPGN------EREDVERGGKIIMPPSA 113
TH G+LEF +DEG Y+P+W ++F E ++E+G + + P
Sbjct: 68 THCGILEFTSDEGCAYIPHWILK-NLFSTEGETLFFEHIELEKGNYVKIQPQT 119
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 75 VADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 134
++D+ K C+S+++ ++ + + K+I+P S LE++ + N+ +P++FK+ N
Sbjct: 7 LSDKKKFCFQLKCYSINLI---KKFNKTKENKMILPISVLEEVNKFNLKWPLIFKIKNNL 63
Query: 135 MGRITHSGVLEL 146
+ TH G+LE
Sbjct: 64 YQKETHCGILEF 75
>gi|84994936|ref|XP_952190.1| ubiquitin fusion degradation protein (UFD1 homologue) [Theileria
annulata strain Ankara]
gi|65302351|emb|CAI74458.1| ubiquitin fusion degradation protein (UFD1 homologue), putative
[Theileria annulata]
Length = 270
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 150/266 (56%), Gaps = 43/266 (16%)
Query: 207 PRPFNRSYKCFSVSMFPGNEREDVERGGK------------IIMPPSALEQLTRLNICYP 254
P +Y+CFSVS F G RE +E+G K I++P SAL +L NI +P
Sbjct: 11 PYAHTSNYRCFSVS-FAG--RESMEQGNKSIFHSLIFSFSLILLPQSALHELASRNISWP 67
Query: 255 MLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM--------MRNLLLDEGELVNIESVS 306
M+F++ N K + T+ GVLEF+++EG +PYW+ M NL L+EG++V I +VS
Sbjct: 68 MMFEILNPKNYKRTNGGVLEFISEEGTCNIPYWVIFYTIDLVMSNLGLNEGDIVTITNVS 127
Query: 307 LPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP 366
LP A + K +P D+ DI+NP+AVLEN LRN+A LT GD+I I+Y +Y +++ KP
Sbjct: 128 LPKANWVKLKPLNEDYWDISNPRAVLENALRNYATLTVGDVIPIHYIQTVYLFQIMDLKP 187
Query: 367 GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDG 426
A +IIE DM V+F P PE KE+E+ D PEP G RLDG
Sbjct: 188 AKACSIIETDMEVEFDMPA----PEP-KEEEKAMETD-----PEPV-------IGKRLDG 230
Query: 427 K--RKKKDTVET-GGTPTKREYQRGI 449
K R K V+T TP K + GI
Sbjct: 231 KTPRLIKQNVDTVNKTPWKNKLPNGI 256
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 15/95 (15%)
Query: 6 PRPFNRSYKCFSVSMFPGNEREDVERGGK------------IIMPPSALEQLTRLNICYP 53
P +Y+CFSVS F G RE +E+G K I++P SAL +L NI +P
Sbjct: 11 PYAHTSNYRCFSVS-FAG--RESMEQGNKSIFHSLIFSFSLILLPQSALHELASRNISWP 67
Query: 54 MLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
M+F++ N K + T+ GVLEF+++EG +PYW
Sbjct: 68 MMFEILNPKNYKRTNGGVLEFISEEGTCNIPYWVI 102
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 15/74 (20%)
Query: 85 YWCFSVSMFPGNEREDVERGGK------------IIMPPSALEQLTRLNICYPMLFKLTN 132
Y CFSVS F G RE +E+G K I++P SAL +L NI +PM+F++ N
Sbjct: 18 YRCFSVS-FAG--RESMEQGNKSIFHSLIFSFSLILLPQSALHELASRNISWPMMFEILN 74
Query: 133 QKMGRITHSGVLEL 146
K + T+ GVLE
Sbjct: 75 PKNYKRTNGGVLEF 88
>gi|328860666|gb|EGG09771.1| hypothetical protein MELLADRAFT_74324 [Melampsora larici-populina
98AG31]
Length = 465
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 13/193 (6%)
Query: 210 FNRSYKCFSVSMFPGNE--------REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
F++ Y+ FS ++ + R +V GGKIIMP AL +LT +++ P +F++ N
Sbjct: 76 FSKGYRAFSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVELTEMDMESPFMFEIRN 135
Query: 262 Q---KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQ 318
K TH GVLEF+AD G V+LP WMM+ L L+EG+ + + LP F+K Q Q
Sbjct: 136 SSPNKTNLFTHCGVLEFIADTGTVHLPQWMMKRLDLNEGDPIKLTGTRLPKGKFAKVQAQ 195
Query: 319 TCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN--AVTIIECD 376
+ FL++ + KAVLE LRNF+CLT GD+I I +N +E+ ++E KP + V+I E D
Sbjct: 196 STLFLELGDHKAVLETSLRNFSCLTKGDIIEIYHNMMTFEILIMELKPDDVPGVSIFETD 255
Query: 377 MNVDFAPPVGYTE 389
+ VDFA PVGY E
Sbjct: 256 LEVDFAAPVGYVE 268
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 9 FNRSYKCFSVSMFPGNE--------REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F++ Y+ FS ++ + R +V GGKIIMP AL +LT +++ P +F++ N
Sbjct: 76 FSKGYRAFSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVELTEMDMESPFMFEIRN 135
Query: 61 Q---KMGRITHSGVLEFVADEGKVYLPYW 86
K TH GVLEF+AD G V+LP W
Sbjct: 136 SSPNKTNLFTHCGVLEFIADTGTVHLPQW 164
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ---KMGRITHSGVLEL 146
R +V GGKIIMP AL +LT +++ P +F++ N K TH GVLE
Sbjct: 101 RSNVMHGGKIIMPQDALVELTEMDMESPFMFEIRNSSPNKTNLFTHCGVLEF 152
>gi|414876356|tpg|DAA53487.1| TPA: hypothetical protein ZEAMMB73_793685, partial [Zea mays]
Length = 241
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
MP SAL++L LNI YPMLF++ + R TH GVLEFVADEG +++P W+M +L + E
Sbjct: 1 MPLSALDRLGGLNIEYPMLFQIKHPSTERATHCGVLEFVADEGFIHMPSWLMAHLGVPEN 60
Query: 298 ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIY 357
E+V + S SLP ATF K QP T DFL + NPK +LE+ F C+T+G+ IA+ + Y
Sbjct: 61 EIVLVRSTSLPKATFMKLQPHTKDFLHVPNPKELLEHNFGKFPCVTAGETIAVTEGERRY 120
Query: 358 ELCVLETKPGNAVTIIECDMNVDFAPPVGYTE-PEKVKEKEEDNMIDPVDLMPEPSGFVA 416
L VLE P AV I+ D VDFAPP+ Y E P V + D EP
Sbjct: 121 YLDVLEACPAGAVCSIDTDCAVDFAPPLDYVEAPPFVASQGSD----------EPPQPAR 170
Query: 417 FHGTGNRLDGK 427
F GTG R+DGK
Sbjct: 171 FSGTGRRMDGK 181
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGN 96
MP SAL++L LNI YPMLF++ + R TH GVLEFVADEG +++P W + P N
Sbjct: 1 MPLSALDRLGGLNIEYPMLFQIKHPSTERATHCGVLEFVADEGFIHMPSWLMAHLGVPEN 60
Query: 97 E 97
E
Sbjct: 61 E 61
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 109 MPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
MP SAL++L LNI YPMLF++ + R TH GVLE
Sbjct: 1 MPLSALDRLGGLNIEYPMLFQIKHPSTERATHCGVLEF 38
>gi|401885854|gb|EJT49939.1| ubiquitin fusion-degradation 1-like protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 390
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 127/216 (58%), Gaps = 25/216 (11%)
Query: 238 MPPSALEQLTRLNICYPMLFKLTNQK--MGRITHSGVLEFVADEGKVYLPYWMMRNLLLD 295
MPPSAL +LT L+I P F L N + T++GVLEF+A+EG V+LP WMM+ L L+
Sbjct: 1 MPPSALIKLTSLDIDSPWTFHLRNPRNPTENQTYAGVLEFIAEEGIVHLPAWMMKKLNLN 60
Query: 296 EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSK 355
EG+ V + LP K Q Q+ DFL++ + KAVLE+ LR ++ LT GD+I I YNS
Sbjct: 61 EGDPVRLTGAVLPKGKMVKIQAQSVDFLEVADAKAVLESALRYYSALTKGDIIEITYNSL 120
Query: 356 IYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPE------------KVK-EKEEDNM 401
++E ++ET P G ++II+ D+ VDFAPPVGY EPE K+K + E
Sbjct: 121 VFEFLIMETTPEGTGISIIDTDLEVDFAPPVGYVEPERKAPAPIPTMADKLKIDVGETTS 180
Query: 402 IDP------VDLMPEPSG---FVAFHGTGNRLDGKR 428
+DP + + + SG +F G G L GKR
Sbjct: 181 VDPSRPVSSMSIRTQGSGDGPLESFTGVGQSLSGKR 216
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 37 MPPSALEQLTRLNICYPMLFKLTNQK--MGRITHSGVLEFVADEGKVYLPYWCF 88
MPPSAL +LT L+I P F L N + T++GVLEF+A+EG V+LP W
Sbjct: 1 MPPSALIKLTSLDIDSPWTFHLRNPRNPTENQTYAGVLEFIAEEGIVHLPAWMM 54
>gi|341884132|gb|EGT40067.1| hypothetical protein CAEBREN_28809 [Caenorhabditis brenneri]
Length = 337
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 135/258 (52%), Gaps = 23/258 (8%)
Query: 229 DVERGGKI-IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
++ GGKI I+ S E + F+LTN ++TH GVLEF A EG+ LP+W
Sbjct: 41 EINYGGKILILCSSRFEGSELWEHHLHLFFQLTNMAAQKVTHCGVLEFSAPEGQAILPHW 100
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L L +G+ V IES ++P ATF+K +P + +FL+I+NPKAVLE LR +ACLT D
Sbjct: 101 MMQQLNLCDGDTVRIESATVPKATFAKLKPMSLEFLNISNPKAVLEVELRKYACLTKNDR 160
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE-PEKVKEKEEDNMI---- 402
I +Y + E V++ KP N+V IIECD+N+DF P GY E P +V
Sbjct: 161 IPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDFDAPEGYVEQPRQVTPAVNAKPPAPPA 220
Query: 403 -----DPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTV----ETGGTPTKREYQR----GI 449
F G+G RLDGK+K +V E G + + I
Sbjct: 221 SAFTGHAQATKAAAPTTTIFGGSGRRLDGKKKPTSSVSLSSEAGASTSDAAAIANDLPAI 280
Query: 450 P----HYDYEPNTLVFLR 463
P + DY+P + F+R
Sbjct: 281 PPVVVNEDYKPGRISFVR 298
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 28 DVERGGKI-IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
++ GGKI I+ S E + F+LTN ++TH GVLEF A EG+ LP+W
Sbjct: 41 EINYGGKILILCSSRFEGSELWEHHLHLFFQLTNMAAQKVTHCGVLEFSAPEGQAILPHW 100
>gi|125524388|gb|EAY72502.1| hypothetical protein OsI_00362 [Oryza sativa Indica Group]
Length = 281
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 14 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG +++P MM +L L E +LV + S S+P ATF K QP T DF ++ P+
Sbjct: 71 CGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHKLSEPR 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
+LE RN+ CLT+G+ IA+ + Y L V+ET+P +AV +IE D V+F + E
Sbjct: 131 YLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQALDQAE 190
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
P + D + PEP+ F F R+DGK
Sbjct: 191 PAAAAAMQVDGVGAG---EPEPARFTGFR---MRMDGK 222
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 14 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 70
Query: 69 SGVLEFVADEGKVYLP 84
GVLEF ADEG +++P
Sbjct: 71 CGVLEFTADEGFIHIP 86
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++ GVL
Sbjct: 18 YRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSYCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|54290482|dbj|BAD61491.1| putative ubiquitin fusion degradation protein [Oryza sativa
Japonica Group]
Length = 296
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 29 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 85
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG +++P MM +L L E +LV + S S+P ATF K QP T DF ++ P+
Sbjct: 86 CGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHKLSEPR 145
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
+LE RN+ CLT+G+ IA+ + Y L V+ET+P +AV +IE D V+F + E
Sbjct: 146 YLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQALDQAE 205
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
P + D + PEP+ F F R+DGK
Sbjct: 206 PAAAAAMQVDGVGAG---EPEPARFTGFR---MRMDGK 237
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 29 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 85
Query: 69 SGVLEFVADEGKVYLP 84
GVLEF ADEG +++P
Sbjct: 86 CGVLEFTADEGFIHIP 101
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++ GVL
Sbjct: 33 YRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSYCGVL 89
Query: 145 EL 146
E
Sbjct: 90 EF 91
>gi|125568991|gb|EAZ10506.1| hypothetical protein OsJ_00341 [Oryza sativa Japonica Group]
Length = 295
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 14 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 70
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF ADEG +++P MM +L L E +LV + S S+P ATF K QP T DF ++ P+
Sbjct: 71 CGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHKLSEPR 130
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
+LE RN+ CLT+G+ IA+ + Y L V+ET+P +AV +IE D V+F + E
Sbjct: 131 YLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQALDQAE 190
Query: 390 PEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
P + D + PEP+ F F R+DGK
Sbjct: 191 PAAAAAMQVDGVGAG---EPEPARFTGFR---MRMDGK 222
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y+C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++
Sbjct: 14 FAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSY 70
Query: 69 SGVLEFVADEGKVYLP 84
GVLEF ADEG +++P
Sbjct: 71 CGVLEFTADEGFIHIP 86
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C +S+ ++E+ + G ++ MP SAL++L L+I YPM F++ N + ++ GVL
Sbjct: 18 YRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQTSYCGVL 74
Query: 145 EL 146
E
Sbjct: 75 EF 76
>gi|403222122|dbj|BAM40254.1| ubiquitin fusion degradation protein [Theileria orientalis strain
Shintoku]
Length = 269
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 130/217 (59%), Gaps = 24/217 (11%)
Query: 245 QLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIES 304
+L NI +PM+F++ N K R T+ GVLEF+++EG +PYW+M+NL L+EG++V I +
Sbjct: 56 KLASRNISWPMMFEIRNPKNFRSTNGGVLEFISEEGTCNIPYWIMQNLELNEGDVVTITN 115
Query: 305 VSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET 364
VSLP A + K +P D+ DI+NP+AVLEN LRN+A LT+GD+I I+Y +Y + +++
Sbjct: 116 VSLPKAKWVKLKPLNDDYWDISNPRAVLENALRNYATLTTGDVIPIHYLQTVYLIEIVDL 175
Query: 365 KPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRL 424
KP A +IIE DM VDF V EP++ EK + VA G RL
Sbjct: 176 KPARACSIIETDMEVDF--DVQMPEPKQSVEK-----------TVTEAEIVA----GKRL 218
Query: 425 DGKRKK--KDTVET-GGTPTKREYQRGI----PHYDY 454
DGK K K T ET TP + + GI P +D+
Sbjct: 219 DGKTPKLTKQTEETVNKTPWENKLPNGIRTRDPEFDW 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 44 QLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
+L NI +PM+F++ N K R T+ GVLEF+++EG +PYW
Sbjct: 56 KLASRNISWPMMFEIRNPKNFRSTNGGVLEFISEEGTCNIPYWIM 100
>gi|297746050|emb|CBI16106.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 128/240 (53%), Gaps = 38/240 (15%)
Query: 190 ASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRL 249
+S H +G+ D+P F + Y C S + +E G KIIMP SAL+ LT L
Sbjct: 31 SSLHVCDSYGYFYDDDLPI-FKQIYHCLPASSL---NKPQLEMGDKIIMPASALDLLTNL 86
Query: 250 NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPV 309
I +PMLFKL N GR+TH GVLEF A EG ++LP WMM NLLL+EG
Sbjct: 87 EISFPMLFKLKNPASGRVTHCGVLEFTAKEGTMHLPSWMMENLLLEEG------------ 134
Query: 310 ATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA 369
DI+ K LR+F+CLT+GD I I+Y++K + + +++TKP A
Sbjct: 135 --------------DISTTK------LRSFSCLTTGDTIVIDYSNKKFYIDIVDTKPSAA 174
Query: 370 VTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVD--LMPEPSGFVAFHGTGNRLDGK 427
V II+ D VDFAPP+ Y E ++ K + + + L + F F G+ RLDGK
Sbjct: 175 VCIIDTDCEVDFAPPLDYEEADEPKPSNLSSKTESRESKLATKLIKFKPFTGSARRLDGK 234
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + Y C S + +E G KIIMP SAL+ LT L I +PMLFKL N GR+TH
Sbjct: 50 FKQIYHCLPASSL---NKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTH 106
Query: 69 SGVLEFVADEGKVYLPYW 86
GVLEF A EG ++LP W
Sbjct: 107 CGVLEFTAKEGTMHLPSW 124
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C S + +E G KIIMP SAL+ LT L I +PMLFKL N GR+TH GVL
Sbjct: 54 YHCLPASSL---NKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTHCGVL 110
Query: 145 ELDGKR 150
E K
Sbjct: 111 EFTAKE 116
>gi|407038041|gb|EKE38918.1| ubiquitin fusion degradation protein 1 family protein, putative
[Entamoeba nuttalli P19]
Length = 254
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI-T 268
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + I T
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDLGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEF A+EG+ P W+M+ L L +G+ +++++V+LP A F + +P T DF I N
Sbjct: 69 HCGVLEFTANEGECIAPQWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLTFDFFKIPNY 128
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDF------ 381
+ V+E LRN++ LT+GD+I+I++N+K Y+L V E KP G AV+++E D+ VDF
Sbjct: 129 RVVMEKELRNYSTLTTGDIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDFDGNGFV 188
Query: 382 --APPVGYTEPEKVKEKEED---------NMIDPVDLMPEPSGFVAFHGTGNRL 424
AP T+ + ++EED I +L + F F G G+ L
Sbjct: 189 ENAP----TQQDNSSDEEEDIGFCFGGTTEEIKKEELSDDSEEFKPFSGVGHSL 238
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-IT 67
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + IT
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDLGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF A+EG+ P W
Sbjct: 69 HCGVLEFTANEGECIAPQW 87
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHS 141
L Y FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + ITH
Sbjct: 11 LTYRVFSFASRQPNKQKQMDLGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHC 70
Query: 142 GVLEL 146
GVLE
Sbjct: 71 GVLEF 75
>gi|449710420|gb|EMD49498.1| ubiquitin fusion degradation family protein [Entamoeba histolytica
KU27]
Length = 254
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI-T 268
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + I T
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEF A+EG+ P W+M+ L L +G+ +++++V+LP A F + +P DF I N
Sbjct: 69 HCGVLEFTANEGECIAPQWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLAFDFFKIPNY 128
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ V+E LRN++ LT+GD+I+I++N+K Y+L V E KP G AV+++E D+ VDF
Sbjct: 129 RVVMEKELRNYSTLTTGDIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDF 182
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-IT 67
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + IT
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF A+EG+ P W
Sbjct: 69 HCGVLEFTANEGECIAPQW 87
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHS 141
L Y FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + ITH
Sbjct: 11 LTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHC 70
Query: 142 GVLEL 146
GVLE
Sbjct: 71 GVLEF 75
>gi|183230750|ref|XP_001913478.1| ubiquitin fusion degradation protein 1 homolog [Entamoeba
histolytica HM-1:IMSS]
gi|169802778|gb|EDS89746.1| ubiquitin fusion degradation protein 1 homolog, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 254
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRI-T 268
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + I T
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEF A+EG+ P W+M+ L L +G+ +++++V+LP A F + +P DF I N
Sbjct: 69 HCGVLEFTANEGECIAPQWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLAFDFFKIPNY 128
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ V+E LRN++ LT+GD+I+I++N+K Y+L V E KP G AV+++E D+ VDF
Sbjct: 129 RVVMEKELRNYSTLTTGDIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDF 182
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-IT 67
F +Y+ FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + IT
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIIT 68
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF A+EG+ P W
Sbjct: 69 HCGVLEFTANEGECIAPQW 87
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHS 141
L Y FS + N+++ ++ GGKI +PPS L + LN+ YP+ F++ + ITH
Sbjct: 11 LTYRVFSFASRQPNKQKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHC 70
Query: 142 GVLEL 146
GVLE
Sbjct: 71 GVLEF 75
>gi|167381340|ref|XP_001735671.1| ubiquitin fusion degradaton protein [Entamoeba dispar SAW760]
gi|165902232|gb|EDR28117.1| ubiquitin fusion degradaton protein, putative [Entamoeba dispar
SAW760]
Length = 254
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-IT 268
F +Y+ FS + N+++ ++ GKI +PPS L + LN+ YP+ F+L + IT
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDFSGKIFLPPSTLASMASLNLVYPLTFRLNKHRNNSVIT 68
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
H GVLEF A+EG+ P W+M+ L L +G+ ++I++V+LP A F + +P DF I N
Sbjct: 69 HCGVLEFTANEGECIAPQWLMKRLSLVDGDYIDIQTVNLPKAKFIRLKPLVFDFFKIPNY 128
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ V+E LRN++ LT GD+I I++N+K Y+L V E KP G AV+I+E D+ VDF
Sbjct: 129 RVVMEKELRNYSTLTIGDIIGISFNNKEYQLEVAECKPEGKAVSIVETDVLVDF 182
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-IT 67
F +Y+ FS + N+++ ++ GKI +PPS L + LN+ YP+ F+L + IT
Sbjct: 9 FRLTYRVFSFASRQPNKQKQMDFSGKIFLPPSTLASMASLNLVYPLTFRLNKHRNNSVIT 68
Query: 68 HSGVLEFVADEGKVYLPYW 86
H GVLEF A+EG+ P W
Sbjct: 69 HCGVLEFTANEGECIAPQW 87
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 83 LPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGR-ITHS 141
L Y FS + N+++ ++ GKI +PPS L + LN+ YP+ F+L + ITH
Sbjct: 11 LTYRVFSFASRQPNKQKQMDFSGKIFLPPSTLASMASLNLVYPLTFRLNKHRNNSVITHC 70
Query: 142 GVLEL 146
GVLE
Sbjct: 71 GVLEF 75
>gi|440298379|gb|ELP91015.1| ubiquitin fusion degradation protein, putative [Entamoeba invadens
IP1]
Length = 255
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 202 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 261
MF F ++Y+ +S G + ++ GK+++PPS L+ + +++ YP+LF +
Sbjct: 1 MFAQRVDTFRQTYRAYSFEK-SGCGKTNLNDSGKVLLPPSTLQVMAGMSLVYPLLFWVQK 59
Query: 262 QKMG-RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
+ +TH GVLEF A E + Y+P WMM+ L + EG+ V + +V+LP A+F +F+P++
Sbjct: 60 YRDNTNVTHCGVLEFTAKEAECYMPPWMMQRLKIGEGDYVELRTVALPKASFIRFKPKSI 119
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-AVTIIECDMNV 379
+F I N K V+E LRN++ +T GD+I+I +NSK YEL V E KP AV+I+E D+ V
Sbjct: 120 EFFKIPNYKVVMERELRNYSAMTVGDVISIGFNSKEYELEVAECKPATRAVSIVETDVAV 179
Query: 380 DF 381
DF
Sbjct: 180 DF 181
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
MF F ++Y+ +S G + ++ GK+++PPS L+ + +++ YP+LF +
Sbjct: 1 MFAQRVDTFRQTYRAYSFEK-SGCGKTNLNDSGKVLLPPSTLQVMAGMSLVYPLLFWVQK 59
Query: 61 QKMG-RITHSGVLEFVADEGKVYLPYW 86
+ +TH GVLEF A E + Y+P W
Sbjct: 60 YRDNTNVTHCGVLEFTAKEAECYMPPW 86
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 95 GNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG-RITHSGVLELDGK 149
G + ++ GK+++PPS L+ + +++ YP+LF + + +TH GVLE K
Sbjct: 22 GCGKTNLNDSGKVLLPPSTLQVMAGMSLVYPLLFWVQKYRDNTNVTHCGVLEFTAK 77
>gi|118354297|ref|XP_001010411.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Tetrahymena thermophila]
gi|89292178|gb|EAR90166.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Tetrahymena thermophila SB210]
Length = 371
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 12/235 (5%)
Query: 226 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLP 285
ER D+E+G KI++PPS L L+ N+ YPM+F + N + + T+ GVLEF+A EG Y+P
Sbjct: 111 ERHDLEKGNKILLPPSVLNTLSASNLPYPMIFCVQNTYLNKQTYVGVLEFIAPEGTCYIP 170
Query: 286 YWMMRNLLLDEGELVNIESVS-LPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTS 344
+WM + L +G+ + + V+ + F K QP F+D+ +P+A+LE LRN+ L
Sbjct: 171 FWMFQMLQCFDGQQIQVTLVTDVKKGKFVKIQPHETAFIDLPDPRAILEKELRNYTVLHQ 230
Query: 345 GDMIAINYNSKIYELCVLETKPG---NAVTIIECDMNVDFAPPVGYTE-PEKVKEKEEDN 400
GD I I + + +++ +LE KP NA+ +++ ++ VDFA P+ Y E P K+E +
Sbjct: 231 GDTIHIEFMKQHFQIDILEVKPANDYNAICVVDAEIEVDFAKPLDYVEHPLPTMTKKESS 290
Query: 401 MIDPVDLMPEPSGFVAFHGTGNRLDGKR------KKKDTVETGGTPTKREYQRGI 449
++ + P+ F G R+DGK K K+ V+ P K G+
Sbjct: 291 VVMGEENQPKQEK-NPFSGKATRIDGKAIDQKKLKMKEEVKEDYDPRKHRLPNGV 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 25 EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLP 84
ER D+E+G KI++PPS L L+ N+ YPM+F + N + + T+ GVLEF+A EG Y+P
Sbjct: 111 ERHDLEKGNKILLPPSVLNTLSASNLPYPMIFCVQNTYLNKQTYVGVLEFIAPEGTCYIP 170
Query: 85 YWCFS-VSMFPGNERE-----DVERGGKIIMPP 111
+W F + F G + + DV++G + + P
Sbjct: 171 FWMFQMLQCFDGQQIQVTLVTDVKKGKFVKIQP 203
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 84 PYWCFSVSMFPGN--EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHS 141
P + + ++P ER D+E+G KI++PPS L L+ N+ YPM+F + N + + T+
Sbjct: 96 PQYSDHLEVYPAYMLERHDLEKGNKILLPPSVLNTLSASNLPYPMIFCVQNTYLNKQTYV 155
Query: 142 GVLEL 146
GVLE
Sbjct: 156 GVLEF 160
>gi|2645877|gb|AAB87522.1| Ufd1p [Schizosaccharomyces pombe]
Length = 205
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITN 327
TH GVLEF+A+EG+VYLPYWMM L L+ G+LV + + + ++ K QPQ+ +FLDIT+
Sbjct: 2 THGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITD 61
Query: 328 PKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNA---VTIIECDMNVDFAPP 384
+AVLEN LRNF+ LT D+ I YN ++Y++ V++ +P ++ V+++E D+ VDF PP
Sbjct: 62 HRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDFDPP 121
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLMPEPSGF--VAFHGTGNRLDGKRKKKDTVETGGTP 440
+GY E +++ ++ N+ M G+ + G N + G K + E P
Sbjct: 122 IGY--EESLQKNKQQNIAGVQGTMVTKIGYDELVRQGDSNLMKGTGTKLNGXEVAEVP 177
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 67 THSGVLEFVADEGKVYLPYWCF-SVSMFPGNE----REDVERGGKIIMPPSAL 114
TH GVLEF+A+EG+VYLPYW ++S+ PG+ D+ +G + + P ++
Sbjct: 2 THGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSV 54
>gi|350592674|ref|XP_001929657.3| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Sus scrofa]
Length = 170
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 97/139 (69%), Gaps = 7/139 (5%)
Query: 332 LENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPE 391
LEN LRNFACLT+GD+IAINYN KIYEL V+ETKP AV+IIECDMNVDF P+GY EPE
Sbjct: 5 LENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPE 64
Query: 392 KVKEKEE--DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTK-REYQRG 448
+ + EE + D E GF AF G+GNRLDGK+K VE +P K + +RG
Sbjct: 65 RQIQHEESAEGEADHGGYAGE-LGFRAFSGSGNRLDGKKK---GVEPSPSPIKPGDIKRG 120
Query: 449 IPHYDYEPNTLVFLRNIKP 467
IP+Y+++ + F+RN +P
Sbjct: 121 IPNYEFKLGKITFIRNSRP 139
>gi|385301979|gb|EIF46133.1| ubiquitin fusion degradation protein 1 [Dekkera bruxellensis
AWRI1499]
Length = 256
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 25/173 (14%)
Query: 284 LPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLT 343
+P WM+ L G LV I++ LP+ +F K +PQ+ DFL+IT+PKAVLEN LRNFA LT
Sbjct: 1 MPQWMLDTLQCQPGTLVKIQTTDLPLGSFVKLEPQSVDFLEITDPKAVLENALRNFATLT 60
Query: 344 SGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDN 400
GD+I ++YN++IY++ +LE KP + +IE D+ DFAPPVGY EP+ K+KEE+
Sbjct: 61 VGDIIQLHYNNQIYKIKILEXKPDSESQGICVIETDLETDFAPPVGYVEPDYKKQKEENA 120
Query: 401 MIDPVDLMPEPS----------------------GFVAFHGTGNRLDGKRKKK 431
I + P+ + F GTG +L GK+ K
Sbjct: 121 KIRREKALDAPALRGEGSMAKQIHYDKLLRASEDNDIKFKGTGIKLSGKKVTK 173
>gi|156602887|ref|XP_001618730.1| hypothetical protein NEMVEDRAFT_v1g153571 [Nematostella vectensis]
gi|156200119|gb|EDO26630.1| predicted protein [Nematostella vectensis]
Length = 82
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 69/75 (92%)
Query: 214 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 273
Y+C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN ++ R TH GVL
Sbjct: 3 YRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRSTHCGVL 62
Query: 274 EFVADEGKVYLPYWM 288
EFVADEGK+YLP+W+
Sbjct: 63 EFVADEGKIYLPHWV 77
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 68/74 (91%)
Query: 13 YKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 72
Y+C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN ++ R TH GVL
Sbjct: 3 YRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRSTHCGVL 62
Query: 73 EFVADEGKVYLPYW 86
EFVADEGK+YLP+W
Sbjct: 63 EFVADEGKIYLPHW 76
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SV+M PGNER+DVERGGKIIMPPSAL+QLTRLNI YPMLFKLTN ++ R TH GVL
Sbjct: 3 YRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRSTHCGVL 62
Query: 145 EL 146
E
Sbjct: 63 EF 64
>gi|449671915|ref|XP_002163601.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Hydra
magnipapillata]
Length = 100
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 197 QFGFNMFP-DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPM 255
F F MF ++P FN Y+C+SV+M GNER+DVERG KII+PPSAL+ LTRLNI YPM
Sbjct: 1 MFNFGMFASNLPLSFNTQYRCYSVAMLSGNERKDVERGAKIILPPSALDILTRLNIVYPM 60
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM 288
LFKLTN ++ + TH GVLEFVADEGK Y+P+W+
Sbjct: 61 LFKLTNHRLKKYTHCGVLEFVADEGKAYIPHWV 93
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 69/83 (83%)
Query: 4 DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM 63
++P FN Y+C+SV+M GNER+DVERG KII+PPSAL+ LTRLNI YPMLFKLTN ++
Sbjct: 10 NLPLSFNTQYRCYSVAMLSGNERKDVERGAKIILPPSALDILTRLNIVYPMLFKLTNHRL 69
Query: 64 GRITHSGVLEFVADEGKVYLPYW 86
+ TH GVLEFVADEGK Y+P+W
Sbjct: 70 KKYTHCGVLEFVADEGKAYIPHW 92
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+SV+M GNER+DVERG KII+PPSAL+ LTRLNI YPMLFKLTN ++ + TH GVL
Sbjct: 19 YRCYSVAMLSGNERKDVERGAKIILPPSALDILTRLNIVYPMLFKLTNHRLKKYTHCGVL 78
Query: 145 ELDGKRKK 152
E K
Sbjct: 79 EFVADEGK 86
>gi|145503301|ref|XP_001437627.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404779|emb|CAK70230.1| unnamed protein product [Paramecium tetraurelia]
Length = 283
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 121/226 (53%), Gaps = 15/226 (6%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
R + G KI++P SAL+QL + PM+FK+ + + + T+ GVLEFVA+EG +P
Sbjct: 26 RPQINNGNKILLPASALQQLIFIKQNGPMIFKIQSTQSQKFTYVGVLEFVAEEGSCIIPD 85
Query: 287 WMMRNL-LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSG 345
W+ N+ + ++ SLP+ K QP F+D+ +P+A+LEN LRN+ CLT G
Sbjct: 86 WLFENMNFFNRCWVIVSLEQSLPLGKLIKIQPHETAFIDLPDPRAILENQLRNYICLTQG 145
Query: 346 DMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTE--PEKVKEKEEDN 400
+ I I +N Y + ++ P AV I E D+ +DF P+ YTE P+K+ ++N
Sbjct: 146 ETITITFNKIKYMIDIVSVTPKTDKLAVCINEADVEIDFLQPLDYTEAPPQKLV---KNN 202
Query: 401 MIDPVDLMPEPSGFVAFHGTGNRLDGK------RKKKDTVETGGTP 440
++ + F G G RLDGK RK+ + V+ P
Sbjct: 203 STLGMEQDQQQQQSAVFTGKGVRLDGKTGVAQPRKQSEDVKIVAEP 248
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 85
R + G KI++P SAL+QL + PM+FK+ + + + T+ GVLEFVA+EG +P
Sbjct: 26 RPQINNGNKILLPASALQQLIFIKQNGPMIFKIQSTQSQKFTYVGVLEFVAEEGSCIIPD 85
Query: 86 WCF 88
W F
Sbjct: 86 WLF 88
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 98 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
R + G KI++P SAL+QL + PM+FK+ + + + T+ GVLE
Sbjct: 26 RPQINNGNKILLPASALQQLIFIKQNGPMIFKIQSTQSQKFTYVGVLEF 74
>gi|384485653|gb|EIE77833.1| hypothetical protein RO3G_02537 [Rhizopus delemar RA 99-880]
Length = 206
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 93/142 (65%), Gaps = 5/142 (3%)
Query: 294 LDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYN 353
++ G ++ +++ +LP+ +F K QPQ+ DFLDI++ +AVLE LRNF+ LT D+I INYN
Sbjct: 3 VEPGNIIEVKNTTLPLGSFIKIQPQSADFLDISDHRAVLEKALRNFSTLTVNDVIQINYN 62
Query: 354 SKIYELCVLETKP----GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL-M 408
K+YE+ VLE KP + ++I+E D+ VDFAPPVGY EP K ++ + P+DL
Sbjct: 63 DKVYEIKVLEAKPFHEDHSGISIVETDLEVDFAPPVGYVEPSKQQKSQVMTSKMPIDLPK 122
Query: 409 PEPSGFVAFHGTGNRLDGKRKK 430
+ F AF G G L GK K+
Sbjct: 123 AVKNEFSAFQGGGQSLRGKNKR 144
>gi|308158504|gb|EFO61153.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia P15]
Length = 313
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 125/246 (50%), Gaps = 13/246 (5%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYP---MLFKLTNQKMGRITHSGVLEFVADEGKVY 283
RE E GGKII+ L++L NI M F++ + + H GVL+F +Y
Sbjct: 36 RETFENGGKIILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLY 95
Query: 284 LPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLT 343
P W+M + G+ V I S++L TF K QPQ+ FL+I +P+AVL N L NF+C+
Sbjct: 96 APSWIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIM 155
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE--PEKVKEKEEDNM 401
G + + Y++ +L+TKP AV+++ ++ V+FA PVGYTE E+ K+ E
Sbjct: 156 RGQYLRFEHAGVKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKKKYMEKKR 215
Query: 402 IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVF 461
++ E GFV G RLDG+ K ++ P K ++ D
Sbjct: 216 LEEAKKADEAMGFVG----GRRLDGRGKAIASLTEATQPGKPSAEKSAMRVDLTQK---- 267
Query: 462 LRNIKP 467
L +IKP
Sbjct: 268 LSDIKP 273
>gi|145535850|ref|XP_001453658.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421380|emb|CAK86261.1| unnamed protein product [Paramecium tetraurelia]
Length = 283
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 126/225 (56%), Gaps = 9/225 (4%)
Query: 208 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ-KMGR 266
R + + +S S F +++++ +G KI++P SAL+Q+ L PM+F+L + +
Sbjct: 6 RGYQNMLEVYSASTF---QKKNLNQGNKILLPASALQQVLHLKQQGPMIFRLQSTLDDKK 62
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNL-LLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
T+ GVLEF A+EG +P WM+ ++ D ++ L + QP F+D+
Sbjct: 63 YTYVGVLEFTAEEGTCVVPDWMLESMGFFDGCNIIISHEKKLDQGKLIRIQPHETAFIDL 122
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFA 382
+P+A+LEN LRNF CLT G+ I+IN+++ Y + +++ +P N AV I E D+ +DF
Sbjct: 123 PDPRAILENHLRNFICLTEGETISINFHNTNYLIDIVKVEPTNNLKAVCINEADVEIDFM 182
Query: 383 PPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
P+ + + K+ +++ +L + V F GTG R+DGK
Sbjct: 183 KPLDFNDAPPNLVKKSSSLVQQEELQAQKQQTV-FTGTGVRIDGK 226
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 7 RPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ-KMGR 65
R + + +S S F +++++ +G KI++P SAL+Q+ L PM+F+L + +
Sbjct: 6 RGYQNMLEVYSASTF---QKKNLNQGNKILLPASALQQVLHLKQQGPMIFRLQSTLDDKK 62
Query: 66 ITHSGVLEFVADEGKVYLPYWCF-SVSMFPG 95
T+ GVLEF A+EG +P W S+ F G
Sbjct: 63 YTYVGVLEFTAEEGTCVVPDWMLESMGFFDG 93
>gi|440798716|gb|ELR19783.1| ubiquitin fusion degradation protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 556
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 116/194 (59%), Gaps = 13/194 (6%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-------YPMLFKLTNQ 262
F +Y C + F G R ++ GGKI++P SAL+++ ++ P++F+L+N
Sbjct: 167 FYTTYVC-NTPAFIG--RPELNYGGKILLPASALQEIVSKDVAGKQFLSDSPLVFELSNP 223
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCD- 321
G+ T++GV+EF+A+EG P+W+M++L L EG+ VN+ V+LP TF KF+
Sbjct: 224 ANGKKTYAGVMEFLAEEGHANAPFWLMQHLELTEGDDVNVRLVTLPKGTFVKFKAHDSHF 283
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
F+ +PK + E LRNFA L+ GD I I +++ Y VLET+P A+ I D+ V+F
Sbjct: 284 FVRYPDPKPIFETVLRNFAALSQGDHIDITFDAITYHFEVLETQPHTAIDINNVDIEVEF 343
Query: 382 APPVGYTEPEKVKE 395
+ TE E+++E
Sbjct: 344 QRTL--TEEEQLRE 355
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-------YPMLFKLTNQ 61
F +Y C + F G R ++ GGKI++P SAL+++ ++ P++F+L+N
Sbjct: 167 FYTTYVC-NTPAFIG--RPELNYGGKILLPASALQEIVSKDVAGKQFLSDSPLVFELSNP 223
Query: 62 KMGRITHSGVLEFVADEGKVYLPYW 86
G+ T++GV+EF+A+EG P+W
Sbjct: 224 ANGKKTYAGVMEFLAEEGHANAPFW 248
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 29 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKM---GRITHSGVLEFVADE-----GK 80
V GG + + ++ + +N ++ L N+ + RI + L + +E
Sbjct: 107 VSTGGTVQLALFTYQEWSPINTMSSIVTHLKNKLVEANARIYVTNPLPYTDEEVASATTG 166
Query: 81 VYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNIC-------YPMLFKLTNQ 133
Y Y C + F G R ++ GGKI++P SAL+++ ++ P++F+L+N
Sbjct: 167 FYTTYVC-NTPAFIG--RPELNYGGKILLPASALQEIVSKDVAGKQFLSDSPLVFELSNP 223
Query: 134 KMGRITHSGVLEL 146
G+ T++GV+E
Sbjct: 224 ANGKKTYAGVMEF 236
>gi|240276921|gb|EER40431.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces capsulatus
H143]
Length = 322
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 5/132 (3%)
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDIT 326
+ H G DE Y Y +M+ LLL+ G+L+ I+S LP + K Q Q+ FLDI+
Sbjct: 10 MRHPGYTSRRFDE--FYRCYPIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDIS 67
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAP 383
+PKAVLEN RNF+CL+ D+ +YN IYE+ VLETKP NA++++E D+ VDFA
Sbjct: 68 DPKAVLENAFRNFSCLSKDDIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFAT 127
Query: 384 PVGYTEPEKVKE 395
PVGY EP+++ E
Sbjct: 128 PVGYEEPKRINE 139
>gi|255761616|gb|ACU32851.1| ubiquitin fusion degradation protein 1 [Toxoplasma gondii]
Length = 296
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 110/229 (48%), Gaps = 54/229 (23%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F++ Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
+GVLEFVA+EG + PYW
Sbjct: 80 TGVLEFVAEEGTCHFPYWASAQ-------------------------------------- 101
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
LE LR +A LT GD+I + + K ++L V + +P AV+IIE DM V+F P GY E
Sbjct: 102 -GLEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVE 160
Query: 390 PEKVKEKEEDNMIDPV-----------DLMPEPSGFVAFHGTGNRLDGK 427
P V+ K+ + D + S V F G G RLDGK
Sbjct: 161 P-TVRAKQSTSEADAAMNSEEESSEIDSAESDSSQRVLFAGKGTRLDGK 208
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F++ Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH
Sbjct: 23 FSQCYSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTH 79
Query: 69 SGVLEFVADEGKVYLPYWC 87
+GVLEFVA+EG + PYW
Sbjct: 80 TGVLEFVAEEGTCHFPYWA 98
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y CF VS ++++E+G KI++P SAL L RL+I +PMLF++ N+ R TH+GVL
Sbjct: 27 YSCFPVSFIG---KDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHTGVL 83
Query: 145 EL 146
E
Sbjct: 84 EF 85
>gi|159112567|ref|XP_001706512.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia ATCC 50803]
gi|157434609|gb|EDO78838.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia ATCC 50803]
Length = 313
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYP---MLFKLTNQKMGRITHSGVLEFVADEGKVY 283
RE E GGKII+ L++L NI M F++ + + H GVL+F +Y
Sbjct: 36 RETFENGGKIILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLY 95
Query: 284 LPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLT 343
P W+M + G+ V I S++L TF K QPQ+ FL+I +P+AVL N L NF+C+
Sbjct: 96 APSWIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIM 155
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE--PEKVKEKEEDNM 401
G + + Y++ +L+TKP AV+++ ++ V+FA PVGYTE E+ ++ E
Sbjct: 156 RGQYLRFEHAGIKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKRKYMEKKR 215
Query: 402 IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVF 461
++ E GFV G RLDG+ K ++ P ++ D
Sbjct: 216 LEESKKADEAMGFVG----GRRLDGRGKAIASLTEATQPGHPSAEKSAMRVDLTQK---- 267
Query: 462 LRNIKPAS 469
L +IKP++
Sbjct: 268 LSDIKPST 275
>gi|345316106|ref|XP_001520127.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Ornithorhynchus anatinus]
Length = 154
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 75/96 (78%), Gaps = 6/96 (6%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 1 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 60
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
YPMLFKLTN+ R+TH GVLEFVADEG YLP+W
Sbjct: 61 TYPMLFKLTNKNSDRLTHCGVLEFVADEGICYLPHW 96
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRLT 77
Query: 68 HSGVLEFVADEGKVYLPYWCF 88
H GVLEFVADEG YLP+W F
Sbjct: 78 HCGVLEFVADEGICYLPHWDF 98
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 17/95 (17%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y CFSVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 22 YRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRLTHCGV 81
Query: 144 LELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEP 178
LE E +PH+D+ P
Sbjct: 82 LEF----------------VADEGICYLPHWDFVP 100
>gi|261332869|emb|CBH15864.1| ubiquitin fusion degradation protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 306
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 45/279 (16%)
Query: 202 MFP--DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
M+P + P F S + F S+F + + + G ++I+PP+ L++L+ + + YP+ FKL
Sbjct: 1 MYPGKESPEIFRGSLRAFP-SVFASTDAK-INSGSRVILPPTCLQKLSTMRVAYPLQFKL 58
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
N K G ++GVLEF A+EG + +P WM + L EG V+IE+ +LP K +PQ
Sbjct: 59 RNGKRGVTCYAGVLEFSAEEGHIVMPAWMFTAMGLCEGSTVSIETCTLPPGGLIKLRPQE 118
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIE 374
+FL ++NPK VLE L ++ LT G I ++Y + + + V+ K +A++ +
Sbjct: 119 SNFLQLSNPKNVLEMRLSDYPVLTKGTSIVLDYLDRDFVIDVISITDDTGKSVDAISTVR 178
Query: 375 CD-----MNVDFAPPVGY----TEPEKVKEKEEDNMIDPVDLM---------------PE 410
D + V+F P+ TE E+ + + N+I D + P+
Sbjct: 179 ADTQATELKVEFERPLDMPPSPTESER-QMPQGGNIIGADDAVEFAPFVLQPPTIGNQPQ 237
Query: 411 P-----------SGFVAFHGTGNRLDGKRKKKDTVETGG 438
P + FV F G G R+DGK ++ +TGG
Sbjct: 238 PARAKQPKEEAKAAFVPFMGVGRRIDGKSTVEEKSDTGG 276
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 1 MFP--DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
M+P + P F S + F S+F + + + G ++I+PP+ L++L+ + + YP+ FKL
Sbjct: 1 MYPGKESPEIFRGSLRAFP-SVFASTDAK-INSGSRVILPPTCLQKLSTMRVAYPLQFKL 58
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCFSV 90
N K G ++GVLEF A+EG + +P W F+
Sbjct: 59 RNGKRGVTCYAGVLEFSAEEGHIVMPAWMFTA 90
>gi|169154402|emb|CAQ13303.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 100
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%), Gaps = 6/97 (6%)
Query: 198 FGFNMF-PDIPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF P + R F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFEPHVGRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM 288
YPMLFKLTN+ R+TH GVLEFVADEG YLP+W+
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGFCYLPHWL 98
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Query: 9 FNRSYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
F+ Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 68 HSGVLEFVADEGKVYLPYWCFS 89
H GVLEFVADEG YLP+W FS
Sbjct: 79 HCGVLEFVADEGFCYLPHWLFS 100
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 85 YWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLTN+ R+TH GV
Sbjct: 23 YRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 82
Query: 144 LEL 146
LE
Sbjct: 83 LEF 85
>gi|253741483|gb|EES98352.1| Ubiquitin fusion degradation protein 1 [Giardia intestinalis ATCC
50581]
Length = 313
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 9/220 (4%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYP---MLFKLTNQKMGRITHSGVLEFVADEGKVY 283
RE E GGK+I+ L++L NI M F++ + + H GVL+F +Y
Sbjct: 36 RETFENGGKLILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLY 95
Query: 284 LPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLT 343
P W+M + G+ V I S++L TF K QPQ+ FL+I +P+AVL N L NF+C+
Sbjct: 96 APSWIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIM 155
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE--PEKVKEKEEDNM 401
G + + + Y++ +L+TKP AV+++ ++ V+FA PVGYTE E+ K+ E
Sbjct: 156 RGQYLRFEHANIKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKKKYLEKKR 215
Query: 402 IDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPT 441
++ E GF+ G RLDG+ K ++ P
Sbjct: 216 LEEAKKADEAMGFIG----GRRLDGRGKAIASLTGASQPV 251
>gi|162605922|ref|XP_001713476.1| ubiquitin fusion degradation protein [Guillardia theta]
gi|6690141|gb|AAF24006.1|AF083031_03 ubiquitin fusion degradation protein [Guillardia theta]
Length = 175
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 93/153 (60%)
Query: 230 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMM 289
+E G KI++P S L L + + P++F++ N + H GV EF +D+G Y+PYWM
Sbjct: 21 LENGDKIVLPQSILNYLNQNDDLNPIIFEILNLDNNKKCHCGVYEFTSDDGCAYIPYWMF 80
Query: 290 RNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIA 349
+NL ++EG + L F K QPQ +F I+NPKA+LE LR + LT + I+
Sbjct: 81 KNLEINEGSPLCFIQKCLEKGYFLKIQPQQKEFFQISNPKAILELNLRKYTSLTKKNTIS 140
Query: 350 INYNSKIYELCVLETKPGNAVTIIECDMNVDFA 382
I YN+ IY L ++E KPGNA+ II+ D+N++
Sbjct: 141 IEYNNNIYWLNIVEVKPGNAINIIDTDLNLEIC 173
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 29 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
+E G KI++P S L L + + P++F++ N + H GV EF +D+G Y+PYW F
Sbjct: 21 LENGDKIVLPQSILNYLNQNDDLNPIIFEILNLDNNKKCHCGVYEFTSDDGCAYIPYWMF 80
>gi|71747916|ref|XP_823013.1| ubiquitin fusion degradation protein [Trypanosoma brucei TREU927]
gi|70832681|gb|EAN78185.1| ubiquitin fusion degradation protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 306
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 45/279 (16%)
Query: 202 MFP--DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 259
M+P + P F S + F S+F + + + G ++I+PP+ L++L+ + + YP+ FKL
Sbjct: 1 MYPGKESPEIFRGSLRAFP-SVFASTDAK-INSGSRVILPPTCLQKLSTMRVAYPLQFKL 58
Query: 260 TNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQT 319
N K G ++GVLEF A+EG + +P WM + L EG V IE+ +LP K +PQ
Sbjct: 59 RNGKRGVTCYAGVLEFSAEEGHIVMPAWMFTAMGLCEGSTVAIETCTLPPGGLIKLRPQE 118
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIE 374
+FL ++NPK VLE L ++ LT G I ++Y + + + V+ K +A++ +
Sbjct: 119 SNFLQLSNPKNVLEMRLSDYPVLTKGTSIVLDYLDRDFVIDVISITDDTGKSVDAISTVR 178
Query: 375 CD-----MNVDFAPPVGY----TEPEKVKEKEEDNMIDPVDLM---------------PE 410
D + V+F P+ TE E+ + + N+I D + P+
Sbjct: 179 ADTQATELKVEFERPLDMPPSPTESER-QMPQGGNIIGADDAVEFAPFVLQPPTIGNQPQ 237
Query: 411 P-----------SGFVAFHGTGNRLDGKRKKKDTVETGG 438
P + FV F G G R+DGK ++ +TGG
Sbjct: 238 PARTKQPKEEAKAAFVPFMGVGRRIDGKSTVEEKSDTGG 276
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 1 MFP--DIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 58
M+P + P F S + F S+F + + + G ++I+PP+ L++L+ + + YP+ FKL
Sbjct: 1 MYPGKESPEIFRGSLRAFP-SVFASTDAK-INSGSRVILPPTCLQKLSTMRVAYPLQFKL 58
Query: 59 TNQKMGRITHSGVLEFVADEGKVYLPYWCFSV 90
N K G ++GVLEF A+EG + +P W F+
Sbjct: 59 RNGKRGVTCYAGVLEFSAEEGHIVMPAWMFTA 90
>gi|356554447|ref|XP_003545558.1| PREDICTED: uncharacterized protein LOC100779441 [Glycine max]
Length = 573
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 30/201 (14%)
Query: 233 GGKIIMPPSALEQLTRLNI----CYPMLFKLT--------------NQKMGRITHSGVLE 274
G KI +PPS +L+ P+ F+L+ K GR THSGVLE
Sbjct: 91 GDKIKLPPSCFAELSEQGTFDKRQGPLYFQLSLVHEESTSSIQTTDKVKQGRTTHSGVLE 150
Query: 275 FVADEGKVYLPYWMMRNLLLDEGE----LVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
F ADEG V LP + NL EG LV + V LP T++K QP+ F D+ N KA
Sbjct: 151 FTADEGSVGLPPHVWNNLF-SEGTPKPPLVEVRYVWLPKGTYAKLQPEKVGFSDLPNHKA 209
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEP 390
+LE CLR A L+ GD++ +NY YEL VLE KP ++V+++E D+ VD +P
Sbjct: 210 ILETCLRQHATLSQGDILTVNYGQLAYELRVLELKPSSSVSVLETDIEVDI------VDP 263
Query: 391 EKVKEKEEDNMIDPVDL-MPE 410
+ +K + +++ P++ MP+
Sbjct: 264 DTSSQKTDGHVLMPLEFGMPQ 284
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 18/71 (25%)
Query: 32 GGKIIMPPSALEQLTRLNI----CYPMLFKLT--------------NQKMGRITHSGVLE 73
G KI +PPS +L+ P+ F+L+ K GR THSGVLE
Sbjct: 91 GDKIKLPPSCFAELSEQGTFDKRQGPLYFQLSLVHEESTSSIQTTDKVKQGRTTHSGVLE 150
Query: 74 FVADEGKVYLP 84
F ADEG V LP
Sbjct: 151 FTADEGSVGLP 161
>gi|356501298|ref|XP_003519462.1| PREDICTED: uncharacterized protein LOC100777384 [Glycine max]
Length = 573
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 27/194 (13%)
Query: 233 GGKIIMPPSALEQLTRLNIC----YPMLFKLT--------------NQKMGRITHSGVLE 274
G KI +PPS +L+ P+ F+L+ +K GR THSGVLE
Sbjct: 91 GDKIKLPPSCFAELSEQGTFDKGQGPLYFQLSLVHEESTSSIQTTDKEKQGRTTHSGVLE 150
Query: 275 FVADEGKVYLPYWMMRNLLLD---EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAV 331
F ADEG V LP + NL + + LV + V LP T++K QP+ F D+ N KA+
Sbjct: 151 FTADEGSVGLPPHVWNNLFSEGTLKAPLVEVRYVWLPKGTYAKLQPERVGFSDLPNHKAI 210
Query: 332 LENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPE 391
LE CLR A L+ GD++ +NY Y+L VLE KP ++V+++E D+ VD +P+
Sbjct: 211 LETCLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDI------VDPD 264
Query: 392 KVKEKEEDNMIDPV 405
EK +++++ P+
Sbjct: 265 TSSEKTDEHVLMPL 278
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 18/71 (25%)
Query: 32 GGKIIMPPSALEQLTRLNIC----YPMLFKLT--------------NQKMGRITHSGVLE 73
G KI +PPS +L+ P+ F+L+ +K GR THSGVLE
Sbjct: 91 GDKIKLPPSCFAELSEQGTFDKGQGPLYFQLSLVHEESTSSIQTTDKEKQGRTTHSGVLE 150
Query: 74 FVADEGKVYLP 84
F ADEG V LP
Sbjct: 151 FTADEGSVGLP 161
>gi|396082312|gb|AFN83922.1| ubiquitin fusion degradation protein 1 [Encephalitozoon romaleae
SJ-2008]
Length = 227
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+I+P S L L I P F++++ TH GVLEF +EG+V +P WM + L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYKTHCGVLEFTGEEGQVVVPSWMYQQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+++ + V + ++ P+ F K P + DFL+I NPK LE+CLRN+ L+ GD I +
Sbjct: 91 AMEDADEVVLRYMTFPIGKFVKLIPHSVDFLEIENPKLELESCLRNYQVLSEGDEILCQF 150
Query: 353 N---SKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
+ S + + +E P NAV I++ D+ VDF P+G+ +
Sbjct: 151 DEIGSIRFTVAHIE-PPSNAVYIVDTDLAVDFLEPIGFKD 189
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFS 89
GGK+I+P S L L I P F++++ TH GVLEF +EG+V +P W +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYKTHCGVLEFTGEEGQVVVPSWMYQ 88
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 84 PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
P W S F G + + GGK+I+P S L L I P F++++ TH GV
Sbjct: 13 PSWSLSPIKFDGGNQNNF--GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYKTHCGV 70
Query: 144 LELDGKRKK 152
LE G+ +
Sbjct: 71 LEFTGEEGQ 79
>gi|449453521|ref|XP_004144505.1| PREDICTED: uncharacterized protein LOC101203089 [Cucumis sativus]
gi|449493141|ref|XP_004159204.1| PREDICTED: uncharacterized LOC101203089 [Cucumis sativus]
Length = 571
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 18/170 (10%)
Query: 233 GGKIIMPPSALEQLT------------RLNICY---PMLFKLTNQKMGRITHSGVLEFVA 277
G KI + PS+ +L+ +L++ + P ++T +K R THSGVLEF A
Sbjct: 91 GDKIKLSPSSFTELSDQGAFDKGPVYFQLSVVHQEGPSNSEVTKEKTHRATHSGVLEFTA 150
Query: 278 DEGKVYLPYWMMRNLLLDEG---ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLEN 334
DEG V LP + +NL LDE LV + V LP T++K QP+ FLD+ N KA+LE
Sbjct: 151 DEGFVELPPHVWQNLFLDESLTKPLVEVRYVWLPKGTYAKLQPEGLGFLDLPNHKAILET 210
Query: 335 CLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
LR A L+ GD++ + Y Y+L VLE KP ++++++E D+ VD P
Sbjct: 211 SLRQHATLSQGDILTVVYGELTYKLNVLELKPSSSISVLETDIEVDIVGP 260
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 15/68 (22%)
Query: 32 GGKIIMPPSALEQLT------------RLNICY---PMLFKLTNQKMGRITHSGVLEFVA 76
G KI + PS+ +L+ +L++ + P ++T +K R THSGVLEF A
Sbjct: 91 GDKIKLSPSSFTELSDQGAFDKGPVYFQLSVVHQEGPSNSEVTKEKTHRATHSGVLEFTA 150
Query: 77 DEGKVYLP 84
DEG V LP
Sbjct: 151 DEGFVELP 158
>gi|401827801|ref|XP_003888193.1| ubiquitin fusion-degradation protein [Encephalitozoon hellem ATCC
50504]
gi|392999393|gb|AFM99212.1| ubiquitin fusion-degradation protein [Encephalitozoon hellem ATCC
50504]
Length = 227
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+I+P S L L I P F++++ TH GVLEF +EG++ +P WM + L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVYKTHCGVLEFTGEEGQIVVPSWMYQQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+++ + + + ++ P+ F K P + DFL+I NPK LE+CLRN+ L+ GD I +
Sbjct: 91 SMEDADRIVLRYMTFPLGRFVKLIPHSVDFLEIENPKLELESCLRNYQVLSEGDEILCQF 150
Query: 353 NS-KIYELCVLETKP-GNAVTIIECDMNVDFAPPVGY---TEPEKVKEKEEDNMIDPVDL 407
+ V +P NAV I++ D+ VDF P+G+ E E+ K + + P D+
Sbjct: 151 DEVGSIRFTVAHIEPLSNAVYIVDTDLAVDFLEPIGFKDKMERERTVAKYVEVIDSPHDI 210
Query: 408 MP 409
P
Sbjct: 211 KP 212
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVS 91
GGK+I+P S L L I P F++++ TH GVLEF +EG++ +P W
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVYKTHCGVLEFTGEEGQIVVPSW----- 85
Query: 92 MFPGNEREDVER 103
M+ ED +R
Sbjct: 86 MYQQLSMEDADR 97
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 84 PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
P W S F + + GGK+I+P S L L I P F++++ TH GV
Sbjct: 13 PSWSLSPIKFEAGNQNNF--GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVYKTHCGV 70
Query: 144 LELDGKRKK 152
LE G+ +
Sbjct: 71 LEFTGEEGQ 79
>gi|449329902|gb|AGE96170.1| ubiquitin fusion degradation protein 1 [Encephalitozoon cuniculi]
Length = 227
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+I+P S L L I P F++++ TH GVLEF +EG V +P WM + L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSNGIYRTHCGVLEFTGEEGDVVVPSWMYQQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+++ + V + ++ P+ F K P + DFL+I NPK LE+CLRN+ L+ GD I +
Sbjct: 91 SMEDADKVVLRYMTFPLGKFVKLIPHSVDFLEIENPKVELESCLRNYQVLSEGDEILCQF 150
Query: 353 NS-KIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVD 406
+ V +P NA+ I++ D+ VDF P+G+ + + +EK I+ +D
Sbjct: 151 DEVGSIRFTVAHIEPSANAIYIVDTDLAVDFLEPIGFKDKVE-REKTVAKYIEVID 205
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
GGK+I+P S L L I P F++++ TH GVLEF +EG V +P W +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSNGIYRTHCGVLEFTGEEGDVVVPSWMY 87
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 84 PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
P W + F G + + GGK+I+P S L L I P F++++ TH GV
Sbjct: 13 PSWSLRPTKFDGCNQNNF--GGKVIVPQSVLVDLVSFQIQPPFTFEISHSNGIYRTHCGV 70
Query: 144 LELDGKR 150
LE G+
Sbjct: 71 LEFTGEE 77
>gi|19074727|ref|NP_586233.1| UBIQUITIN FUSION DEGRADATION PROTEIN 1 [Encephalitozoon cuniculi
GB-M1]
gi|19069369|emb|CAD25837.1| UBIQUITIN FUSION DEGRADATION PROTEIN 1 [Encephalitozoon cuniculi
GB-M1]
Length = 227
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+I+P S L L I P F++++ TH GVLEF +EG V +P WM + L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYRTHCGVLEFTGEEGDVVVPSWMYQQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+++ + V + ++ P+ F K P + DFL+I NPK LE+CLRN+ L+ GD I +
Sbjct: 91 SMEDADKVVLRYMTFPLGKFVKLIPHSVDFLEIENPKVELESCLRNYQVLSEGDEILCQF 150
Query: 353 NS-KIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVD 406
+ V +P NA+ I++ D+ VDF P+G+ + + +EK I+ +D
Sbjct: 151 DEVGSIRFTVAHIEPSANAIYIVDTDLAVDFLEPIGFKDKVE-REKTVAKYIEVID 205
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
GGK+I+P S L L I P F++++ TH GVLEF +EG V +P W +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYRTHCGVLEFTGEEGDVVVPSWMY 87
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 84 PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
P W + F G + + GGK+I+P S L L I P F++++ TH GV
Sbjct: 13 PSWSLRPTKFDGCNQNNF--GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYRTHCGV 70
Query: 144 LELDGKR 150
LE G+
Sbjct: 71 LEFTGEE 77
>gi|154303562|ref|XP_001552188.1| hypothetical protein BC1G_09352 [Botryotinia fuckeliana B05.10]
Length = 285
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L L+ G+L I+S LP A+ K QPQ+ +FLDI+NPKAVLE R+F+ +T GD+
Sbjct: 1 MMQTLGLETGDLFQIKSTDLPPASLIKLQPQSVNFLDISNPKAVLEKAFRDFSTVTKGDI 60
Query: 348 IAINYNSKIYELCVLETKPGN---AVTIIECDMNVDFAPPVGYTEPEKVK 394
+ +YN IY++ VLE KP V+++E D+ VDFA P+GY EP V+
Sbjct: 61 FSFHYNDTIYDIAVLEVKPVTDKMGVSMLETDVEVDFAAPLGYVEPTPVR 110
>gi|123477247|ref|XP_001321792.1| ubiquitin fusion degradation protein [Trichomonas vaginalis G3]
gi|121904625|gb|EAY09569.1| ubiquitin fusion degradation protein, putative [Trichomonas
vaginalis G3]
Length = 281
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
+ED+ + +I+ + L Q N + FK+TN + ++ EF AD+G V +PY
Sbjct: 2 KEDLNQTSYVIVETAMLNQQMMENQM--ITFKITNPRTQESAYAVEREFTADQGTVIVPY 59
Query: 287 WMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD-ITNPKAVLENCLRNFACLTSG 345
W+M + +DEG+ V I +V LP AT + QP+T F + I P+ VLE LRN+ CLT G
Sbjct: 60 WIMAKIGVDEGDTVQISTVELPAATRTVLQPKTKQFAENIKEPRIVLERELRNYPCLTQG 119
Query: 346 DMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
I I + + +Y L VL+T+P AV + DM VDFAP
Sbjct: 120 STIEITFANVVYPLYVLKTEPLPAVRCRDVDMIVDFAP 157
>gi|221131431|ref|XP_002153988.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Hydra magnipapillata]
Length = 171
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 91/146 (62%), Gaps = 8/146 (5%)
Query: 332 LENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPE 391
LE LR+FACLT GD+IAI YN K YEL VLETKP +AV+IIECDM VDFAPPVGY +P+
Sbjct: 1 LEKVLRSFACLTKGDLIAIKYNDKDYELLVLETKPQDAVSIIECDMQVDFAPPVGYVDPK 60
Query: 392 KVKEKEEDNMIDPVDLMPEPSGFV------AFHGTGNRLDGKRKKKDTVETGGTPTK-RE 444
K EK++ D + P ++ F GTG L GK+K+ + G +P K
Sbjct: 61 KEPEKKKSEEEDEISFDGIPEEYIDRGKEKLFPGTGVTLHGKKKRSKDIVDGESPVKPII 120
Query: 445 YQRGIPHYDYEPNTLVFLRN-IKPAS 469
+RGIP Y+ TLVF R I+P+
Sbjct: 121 IKRGIPDLKYKIGTLVFKRKPIRPSD 146
>gi|357493375|ref|XP_003616976.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355518311|gb|AES99934.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 571
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 21/177 (11%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLT--------------NQKMGRITHSGVLEFV 276
G KI +PPS L+ PM F+L+ +KMG THSGVLEF
Sbjct: 91 GDKIKLPPSCFTDLSDHGALDKGPMYFQLSLTHKEGSSSTQDTDKEKMG-TTHSGVLEFT 149
Query: 277 ADEGKVYLPYWMMRNLLLD----EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVL 332
ADEG V LP + NL + E L+ + V LP T++K QP+ F D+ N KA+L
Sbjct: 150 ADEGSVGLPPHVWNNLFSEGCIMESPLIEVRYVWLPKGTYAKLQPERGGFSDLPNHKAIL 209
Query: 333 ENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
E LR A L+ GD+ +NY ++L VLE KP ++V+++E D+ VD P+ ++E
Sbjct: 210 ETSLRQHATLSQGDIFTVNYGKLEHKLRVLELKPSSSVSVLETDIEVDIVDPIDFSE 266
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 32 GGKIIMPPSALEQLTRLNIC--YPMLFKLT--------------NQKMGRITHSGVLEFV 75
G KI +PPS L+ PM F+L+ +KMG THSGVLEF
Sbjct: 91 GDKIKLPPSCFTDLSDHGALDKGPMYFQLSLTHKEGSSSTQDTDKEKMG-TTHSGVLEFT 149
Query: 76 ADEGKVYLP 84
ADEG V LP
Sbjct: 150 ADEGSVGLP 158
>gi|378756072|gb|EHY66097.1| hypothetical protein NERG_00793 [Nematocida sp. 1 ERTm2]
Length = 227
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 234 GKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLL 293
GKI +P L L + P +FK++ TH GV EF+ + + LP W+ L
Sbjct: 31 GKIFLPQLCLITLVSKQVDTPYIFKISANGDISYTHVGVQEFIDEPDEAILPNWLYEQLA 90
Query: 294 LDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYN 353
LD G V I VSLP TF K PQ+ DFL+I NPK LEN LRN+ L+ GD I++
Sbjct: 91 LD-GSPVEISYVSLPKGTFIKLLPQSKDFLEIENPKIALENSLRNYQVLSKGDTISLYIE 149
Query: 354 SKIYEL--CVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
S+ + V E +P G + II+ D+ VDF PP Y E
Sbjct: 150 SEFKHILFTVAEIQPEGPGIIIIDTDLEVDFLPPADYVE 188
>gi|303391136|ref|XP_003073798.1| ubiquitin fusion degradation protein 1 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302946|gb|ADM12438.1| ubiquitin fusion degradation protein 1 [Encephalitozoon
intestinalis ATCC 50506]
Length = 227
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+I+P S L L I P F++++ TH GVLEF +EG+V +P WM + L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVFKTHCGVLEFTGEEGQVVVPSWMYQQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+ + + V ++ ++ P+ F K P + DFL++ NPK LE CLRN+ L+ GD I +
Sbjct: 91 SMGDVDKVELKYMTFPLGRFVKLIPHSVDFLEVENPKQELELCLRNYQVLSEGDEILFQF 150
Query: 353 NS-KIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
+ V +P +AV I++ D+ VDF P+G+ +
Sbjct: 151 DEVGSMRFTVAHIEPSSSAVYIVDTDLAVDFLEPIGFKD 189
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCF 88
GGK+I+P S L L I P F++++ TH GVLEF +EG+V +P W +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVFKTHCGVLEFTGEEGQVVVPSWMY 87
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 84 PYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV 143
P W S F G + + GGK+I+P S L L I P F++++ TH GV
Sbjct: 13 PSWSLSPKKFEGCNQNNF--GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVFKTHCGV 70
Query: 144 LELDGKR 150
LE G+
Sbjct: 71 LEFTGEE 77
>gi|387594010|gb|EIJ89034.1| hypothetical protein NEQG_00853 [Nematocida parisii ERTm3]
gi|387595788|gb|EIJ93411.1| hypothetical protein NEPG_01753 [Nematocida parisii ERTm1]
Length = 227
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 232 RGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRN 291
GKI +P L L + P +FK++ TH GV EF+ + + LP W+
Sbjct: 29 HSGKIFLPQICLVTLISKQVDTPYIFKISANDNISYTHVGVQEFIDEPDEAILPNWLYDQ 88
Query: 292 LLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAIN 351
L LD G V I VSLP F + PQ+ DFL+I NPKA LE+ LRN+ L+ GD I++
Sbjct: 89 LALD-GSPVEITYVSLPKGEFIRLLPQSKDFLEIENPKASLEDSLRNYQVLSEGDTISLY 147
Query: 352 YNSKIYEL--CVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
S+ + V E KP G + II+ D+ VDF PP Y E
Sbjct: 148 IESEFKPILFTVAEIKPKGPGINIIDTDLEVDFLPPTDYIE 188
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 31 RGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSV 90
GKI +P L L + P +FK++ TH GV EF+ + + LP W +
Sbjct: 29 HSGKIFLPQICLVTLISKQVDTPYIFKISANDNISYTHVGVQEFIDEPDEAILPNWLYDQ 88
Query: 91 SMFPGNERE 99
G+ E
Sbjct: 89 LALDGSPVE 97
>gi|340368334|ref|XP_003382707.1| PREDICTED: hypothetical protein LOC100636770 [Amphimedon
queenslandica]
Length = 781
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVA-DEGKVYLP 285
R D++ G K+I+ P L + + YPM F L N+ ++ H+GVLEF +LP
Sbjct: 315 RSDIDSGDKMILSPDILMACEQKELSYPMAFCLENKAQNKMVHAGVLEFSNPTPNTAFLP 374
Query: 286 YWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK--AVLENCLRNFACLT 343
WM +L + E V+ V LP TF + QP + +L + K A+LE LRNF LT
Sbjct: 375 QWMFDHLSVGEDHEVDFGYVDLPKGTFVQLQPVSSAWLAVPYDKRVAILEFQLRNFQTLT 434
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMI 402
G + I Y + +L KP ++I++ D+ DF P Y V+E + +N++
Sbjct: 435 EGTKVTITYELNKHTFKILRCKPAKGISIVDADVKTDFVEPADYNRFHSVEEGQAENIM 493
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVA-DEGKVYLP 84
R D++ G K+I+ P L + + YPM F L N+ ++ H+GVLEF +LP
Sbjct: 315 RSDIDSGDKMILSPDILMACEQKELSYPMAFCLENKAQNKMVHAGVLEFSNPTPNTAFLP 374
Query: 85 YWCF 88
W F
Sbjct: 375 QWMF 378
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 76 ADEGKVYLPYWCFSVSMFPGN--EREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ 133
+DE +V +P + ++P + R D++ G K+I+ P L + + YPM F L N+
Sbjct: 294 SDEEQVEIPS---KILVYPASMISRSDIDSGDKMILSPDILMACEQKELSYPMAFCLENK 350
Query: 134 KMGRITHSGVLEL 146
++ H+GVLE
Sbjct: 351 AQNKMVHAGVLEF 363
>gi|300175403|emb|CBK20714.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 231 ERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMR 290
E G KII+P A+ + YP++F+++N ++ GV EF A E Y+P W+M
Sbjct: 9 EYGDKIILPEMAMAYINGTTAQYPLMFRISNGSQS--SYCGVKEFSAPERNCYVPRWIMA 66
Query: 291 NLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAI 350
L + G+ + +E+++L ATF K + + F +++NP+A+LE L+NF+ L+ GD I I
Sbjct: 67 KLRISPGDYLIVENLNLRKATFVKLKFRDGTFGELSNPRAILEIKLKNFSVLSKGDSITI 126
Query: 351 NYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKE--KEEDNMIDP 404
+ K Y + +++T+P + V I+E D+ VD + Y E EK+ +EE ++ +P
Sbjct: 127 EHLGKEYIIDIIDTQPDDVVVIVETDVEVD----IEYAEVEKISPAIQEESDVTEP 178
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 30 ERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFS 89
E G KII+P A+ + YP++F+++N ++ GV EF A E Y+P W +
Sbjct: 9 EYGDKIILPEMAMAYINGTTAQYPLMFRISNGSQS--SYCGVKEFSAPERNCYVPRWIMA 66
Query: 90 -VSMFPGN 96
+ + PG+
Sbjct: 67 KLRISPGD 74
>gi|67588481|ref|XP_665356.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656005|gb|EAL35126.1| hypothetical protein Chro.40141, partial [Cryptosporidium hominis]
Length = 137
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + TH
Sbjct: 44 FINEYSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPTKNKFTH 100
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVS 306
SGVLEFVA+EG Y+PYWMM+NL L EG++ +I + S
Sbjct: 101 SGVLEFVAEEGTCYMPYWMMQNLELQEGDITSIMNTS 137
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + TH
Sbjct: 44 FINEYSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPTKNKFTH 100
Query: 69 SGVLEFVADEGKVYLPYW 86
SGVLEFVA+EG Y+PYW
Sbjct: 101 SGVLEFVAEEGTCYMPYW 118
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVL 144
Y C+ VS F G R+++E G KI++PPSAL QL R NI +PMLF+++N + THSGVL
Sbjct: 48 YSCYPVS-FAG--RDELEGGNKILLPPSALNQLARRNITWPMLFQISNPTKNKFTHSGVL 104
Query: 145 EL 146
E
Sbjct: 105 EF 106
>gi|299471003|emb|CBN78864.1| putative ubiquitin fusion-degradation protein [Ectocarpus
siliculosus]
Length = 1016
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 20/194 (10%)
Query: 212 RSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG--RITH 269
++Y+C S++ +R +E G KIIMP +A + RL + P+LFKL N +G RI
Sbjct: 23 KTYQCHSMACL---DRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVGTRRIMG 79
Query: 270 S---------GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESV-SLPVATFSKFQPQT 319
+ GVLEF A E +V+LPYW+M+NLLL EG V + S+ P +F +F+P
Sbjct: 80 TTGPSPSQFCGVLEFSAPEDQVFLPYWLMQNLLLSEGGRVELRSILRPPAGSFVRFKPHD 139
Query: 320 CDFLDIT---NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIEC 375
FL + PKA++E LR ++ L+ G I + + + L V+E + +A +
Sbjct: 140 EAFLGVAAKQGPKALMEFALRRYSVLSEGATILVQHEGDNFFLDVMELRTFDSAPATVVS 199
Query: 376 DMNVDFAPPVGYTE 389
D + D P GY+
Sbjct: 200 DGDGD-GPSPGYSS 212
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 14/87 (16%)
Query: 11 RSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG--RITH 68
++Y+C S++ +R +E G KIIMP +A + RL + P+LFKL N +G RI
Sbjct: 23 KTYQCHSMACL---DRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVGTRRIMG 79
Query: 69 S---------GVLEFVADEGKVYLPYW 86
+ GVLEF A E +V+LPYW
Sbjct: 80 TTGPSPSQFCGVLEFSAPEDQVFLPYW 106
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 136
Y C S++ +R +E G KIIMP +A + RL + P+LFKL N +G
Sbjct: 25 YQCHSMACL---DRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVG 73
>gi|164605542|dbj|BAF98608.1| CM0545.430.nc [Lotus japonicus]
Length = 570
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 26/192 (13%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLT--------------NQKMGRITHSGVLEFV 276
G KI +PPS L+ PM F+L+ +K G THSGVLEF
Sbjct: 91 GDKIKLPPSCFTDLSDNGALDKGPMYFQLSLVHVEGTSGIEGADKEKQG-TTHSGVLEFT 149
Query: 277 ADEGKVYLPYWMMRNLLLD---EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLE 333
ADEG V LP + NL + LV + V LP T++K QP+ F D+ N KA+LE
Sbjct: 150 ADEGSVGLPPHVWNNLFSEVSVNSPLVEVRYVWLPKGTYAKLQPERAGFSDLPNHKAILE 209
Query: 334 NCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKV 393
LR A L+ GD++ +NY Y+L VLE KP +V+++E D+ VD + +
Sbjct: 210 TSLRQHATLSQGDILTVNYGELAYKLRVLELKPSTSVSVLETDIEVDI------VDSDTS 263
Query: 394 KEKEEDNMIDPV 405
EK + +++ P+
Sbjct: 264 LEKTDQHVLIPI 275
>gi|342184410|emb|CCC93892.1| putative ubiquitin fusion degradation protein [Trypanosoma
congolense IL3000]
Length = 316
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 90/143 (62%), Gaps = 4/143 (2%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F + + FS + P + + ++ GG++++PP LE+L++ ++ YP+ F++ + GR+ +
Sbjct: 7 FEKRLRAFSSNFAPDSSK--IDGGGRVLLPPGCLEELSKKSVAYPLQFRI--EYNGRVCY 62
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
GVLEF+A+EG + +P WM L+L+ + V+I++ +L + K +PQ F+++++P+
Sbjct: 63 GGVLEFIAEEGTIIMPDWMFSTLMLEPNKTVSIKTCTLLPGSLVKLRPQQSQFIELSDPR 122
Query: 330 AVLENCLRNFACLTSGDMIAINY 352
VLE L + LT G I +NY
Sbjct: 123 YVLEMHLSQYPVLTRGTTIVLNY 145
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 68
F + + FS + P + + ++ GG++++PP LE+L++ ++ YP+ F++ + GR+ +
Sbjct: 7 FEKRLRAFSSNFAPDSSK--IDGGGRVLLPPGCLEELSKKSVAYPLQFRI--EYNGRVCY 62
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNE 97
GVLEF+A+EG + +P W FS M N+
Sbjct: 63 GGVLEFIAEEGTIIMPDWMFSTLMLEPNK 91
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 87 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
FS + P + + ++ GG++++PP LE+L++ ++ YP+ F++ + GR+ + GVLE
Sbjct: 13 AFSSNFAPDSSK--IDGGGRVLLPPGCLEELSKKSVAYPLQFRI--EYNGRVCYGGVLEF 68
>gi|255576913|ref|XP_002529342.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223531213|gb|EEF33059.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 570
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 104/211 (49%), Gaps = 28/211 (13%)
Query: 222 FPGNEREDVERGGKIIMPPSALEQLTRLNIC--YPMLFKL------------TNQKMGRI 267
F GN G KI +P S +L+ P+ F+L T +I
Sbjct: 87 FQGN-------GDKIKLPSSCFTELSDQGAFDKGPIYFQLSVIHQEGSSEMKTTDSEQKI 139
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLD---EGELVNIESVSLPVATFSKFQPQTCDFLD 324
THSGVLEF A+EG V LP + NL E LV I LP T++K QP+ F D
Sbjct: 140 THSGVLEFTAEEGSVGLPPHVWNNLFPSGPLEVPLVEIRYRWLPKGTYAKLQPEVVGFSD 199
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
+ N KA+LE LR A L+ GD+I +N+ Y+L VLE KP ++V+++E D+ VD P
Sbjct: 200 LPNHKAILETTLRQHATLSQGDVITVNHGILTYKLRVLELKPSSSVSVLETDIEVDIVGP 259
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLMPEPSGFV 415
+ V E +++ P+ + SG V
Sbjct: 260 ----DSTSVSETANQHVLKPLTVGTLESGMV 286
>gi|402465665|gb|EJW01375.1| hypothetical protein EDEG_00463 [Edhazardia aedis USNM 41457]
Length = 229
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK I+P L +L + I P F++++ T+ GVL+F A++ + +P WM + L
Sbjct: 32 GGKCILPQIILAELFEMEIPTPYTFEISHCGGVFKTNCGVLDFTAEDLTITVPEWMYQQL 91
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
L + + ++ V LP + K P + +FLDI NPK LE LRN+ LT GD I N+
Sbjct: 92 DLAGTDKITLKIVVLPKGRYVKLLPHSHEFLDIENPKRELEKTLRNYQVLTQGDEILCNF 151
Query: 353 NSKIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
V E KP G V I++ D+ V+F PP GY E
Sbjct: 152 EEGNMRFTVAEVKPAGLGVYIVDTDLEVEFLPPFGYEE 189
>gi|301099548|ref|XP_002898865.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
gi|262104571|gb|EEY62623.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
Length = 357
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 15/170 (8%)
Query: 230 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK----------MGRITHSGVLEFVADE 279
+E G KI++PP L +L L I P+LF + + + + V EF A +
Sbjct: 4 LEFGDKIVLPPKILLELQCLKIPTPLLFMVRSASQDLHFERYPDVCTRQYCSVQEFSAPD 63
Query: 280 GKVYLPYWMMRNLLLDEGELVNIES-VSLPVATFSKFQPQTCDFLDIT---NPKAVLENC 335
G+V+LPYW+M+NL + EG+ V + S V+LP + +FQP++ FLD+ PK ++E
Sbjct: 64 GQVFLPYWLMQNLRVPEGDWVVVTSVVNLPRGIYCRFQPESTSFLDLAAEIGPKLLMETA 123
Query: 336 LRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTII-ECDMNVDFAPP 384
LR ++ L+ G I I Y + Y + V E KP V++ + D+ DF PP
Sbjct: 124 LRRYSVLSMGSTIVIEYGTVRYHVQVAELKPAPVVSLCGDVDLETDFMPP 173
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 29 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK----------MGRITHSGVLEFVADE 78
+E G KI++PP L +L L I P+LF + + + + V EF A +
Sbjct: 4 LEFGDKIVLPPKILLELQCLKIPTPLLFMVRSASQDLHFERYPDVCTRQYCSVQEFSAPD 63
Query: 79 GKVYLPYW 86
G+V+LPYW
Sbjct: 64 GQVFLPYW 71
>gi|300709039|ref|XP_002996688.1| hypothetical protein NCER_100186 [Nosema ceranae BRL01]
gi|239606008|gb|EEQ83017.1| hypothetical protein NCER_100186 [Nosema ceranae BRL01]
Length = 229
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK+ +P S LE L L I P F+++ TH GVLEF A+EG + +P WM L
Sbjct: 31 GGKVFLPQSVLEDLVVLQIQPPYTFQISRTDTKEFTHCGVLEFTAEEGTIVVPLWMYNQL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
L + V + ++ + T+ K P T FL++ NPK LEN LR + L+ D I +
Sbjct: 91 DLKSAKEVKLAYKTIEMGTYLKLLPHTPKFLEVENPKQELENVLRFYPTLSLNDEIECVF 150
Query: 353 NS-KIYELCVLETKPGN--AVTIIECDMNVDFAPPVGYTEP---EKVKEK--EEDNMIDP 404
+ + + V E P + + ++ D++VDF P+GY E EK K E I
Sbjct: 151 SEIGLIKFTVTEIDPSDDGVIYTVDTDLSVDFCEPIGYKEKLEDEKTVNKYLEVKKTIGD 210
Query: 405 VDLMPEPSGFVAFHGTG 421
V+++ ++FH G
Sbjct: 211 VNIISMNKMGISFHPKG 227
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFS 89
GGK+ +P S LE L L I P F+++ TH GVLEF A+EG + +P W ++
Sbjct: 31 GGKVFLPQSVLEDLVVLQIQPPYTFQISRTDTKEFTHCGVLEFTAEEGTIVVPLWMYN 88
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 104 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKR 150
GGK+ +P S LE L L I P F+++ TH GVLE +
Sbjct: 31 GGKVFLPQSVLEDLVVLQIQPPYTFQISRTDTKEFTHCGVLEFTAEE 77
>gi|429966458|gb|ELA48455.1| hypothetical protein VCUG_00064 [Vavraia culicis 'floridensis']
Length = 228
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK ++P +E L L I P F++++ ++H+GVLEF A ++ +P W+ + L
Sbjct: 33 GGKALLPQRVIEDLVNLQIPAPYTFEISHSNRLYVSHTGVLEFTARGEEIVVPEWLYQQL 92
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+D+ LV + L K P T DFL+I +PK LE CL N+ LT GD I ++
Sbjct: 93 EMDQCGLVTVTYKQLMPGRSIKLLPHTTDFLEIESPKRELEKCLVNYQVLTCGDEIVCSF 152
Query: 353 NS-KIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
+ + V + +P +A+ I++ D+ V+F PP+GY E
Sbjct: 153 DEYGVMRFTVNQIEPDDDAIYIVDTDLIVEFLPPIGYEE 191
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFS 89
GGK ++P +E L L I P F++++ ++H+GVLEF A ++ +P W +
Sbjct: 33 GGKALLPQRVIEDLVNLQIPAPYTFEISHSNRLYVSHTGVLEFTARGEEIVVPEWLYQ 90
>gi|224131638|ref|XP_002321140.1| predicted protein [Populus trichocarpa]
gi|222861913|gb|EEE99455.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKL-------------TNQKMGRITHSGVLEFVA 277
G KI +PPS L+ P+ F+L T+ K THSGVLEF A
Sbjct: 91 GDKIKLPPSCFTGLSDQGAFDKGPLYFQLSVVHQEGSSEMIDTDSKQS-TTHSGVLEFTA 149
Query: 278 DEGKVYLPYWMMRNLL-LD--EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLEN 334
+EG V LP + NL +D + L+ ++ V LP T++K QP F D+ N KAVLE
Sbjct: 150 EEGSVGLPPHVWSNLFPIDSPKAPLIEVQYVWLPKGTYAKLQPDVVGFSDLPNHKAVLET 209
Query: 335 CLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
LR A L+ GD+I +N+ Y+L VLE +P ++V+++E D+ VD P
Sbjct: 210 SLRQHATLSEGDVITVNHGILTYKLQVLELRPSSSVSVLETDIEVDVVGP 259
>gi|440492832|gb|ELQ75365.1| Ubiquitin fusion-degradation protein [Trachipleistophora hominis]
Length = 225
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
GGK ++P +E L L I P F++++ ++H+GVLEF A ++ +P W+ + L
Sbjct: 33 GGKALLPQRVIEDLVNLQIPAPYTFEISHSNRLYVSHTGVLEFTARGEEIVVPEWLYQQL 92
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
+D+ LV + L K P T DFL+I +PK LE CL N+ LT GD I ++
Sbjct: 93 EMDQCGLVTVTYKQLMPGRSIKLLPHTTDFLEIESPKRELEKCLVNYQVLTCGDEIVCSF 152
Query: 353 NSK-IYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTE 389
+ V + +P +A+ I++ D+ V+F PP+GY E
Sbjct: 153 DEYGAMRFTVNQIEPDDDAIYIVDTDLIVEFLPPIGYEE 191
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFS 89
GGK ++P +E L L I P F++++ ++H+GVLEF A ++ +P W +
Sbjct: 33 GGKALLPQRVIEDLVNLQIPAPYTFEISHSNRLYVSHTGVLEFTARGEEIVVPEWLYQ 90
>gi|269859738|ref|XP_002649593.1| ubiquitin fusion degradation protein 1 [Enterocytozoon bieneusi
H348]
gi|220066956|gb|EED44425.1| ubiquitin fusion degradation protein 1 [Enterocytozoon bieneusi
H348]
Length = 229
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
KI +P S L LT N+ P +F+++++ T V F EG+V LP WM +L
Sbjct: 31 SSKISLPMSILNDLTIQNLPLPYIFEISHENGILKTKCTVGNFTDYEGQVMLPAWMWEHL 90
Query: 293 LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINY 352
L V I + LP+ K P + DFL I NP+ LE LRN+ LT GD I +N+
Sbjct: 91 DLQTSSFVQISYIRLPLGKKVKLLPHSTDFLKIDNPRVELETALRNYGVLTIGDEIRLNF 150
Query: 353 -NSKIYELCVLETKPG--NAVTIIECDMNVDFAPPVGYTEPEK 392
+ K V+E P N++ I++ D+NV+F P+GY E K
Sbjct: 151 IHFKNMIFSVIEVDPSYDNSIYIVDTDLNVEFEEPLGYQEELK 193
>gi|326519140|dbj|BAJ96569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 569
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 233 GGKIIMPPSALEQLTRLNICY--PMLFKLTN-----------QKMGRITHSGVLEFVADE 279
G KI +PPS+ + L+ PM F+L+N Q T GVLEF A E
Sbjct: 91 GDKIKLPPSSFKDLSDQGALDKGPMYFRLSNVRDRVPGASPDQDAEEETCCGVLEFTARE 150
Query: 280 GKVYLPYWMMRNLL---LDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
G LP + NL + + L+ ++ SLP T++K +P+ F D+ N +AVLE L
Sbjct: 151 GSAQLPPHVWNNLFQSDIPDVPLIQVKYASLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 210
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
RN A L+ D++ +NY Y+L VLE KP ++V+++E D+ VD P
Sbjct: 211 RNHATLSENDVVMVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|11139266|gb|AAG31651.1| PRLI-interacting factor K [Arabidopsis thaliana]
Length = 574
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 215 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 269
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 93 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 145
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGE----LVNIESVSLPVATFSKFQPQTCDFLDI 325
SGVLEF A++G + LP + NL LV I + LP +++K QP F D+
Sbjct: 146 SGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLGFSDL 205
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
N KA+LE LR A L+ D++ +NY Y+L VLE +P +++++E D+ VD
Sbjct: 206 PNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDIVS-- 263
Query: 386 GYTEPEKVKEKEEDNMIDPVDLMPEPSGFV 415
P+ V ++ +++ P+ SG V
Sbjct: 264 ----PDIVSDQPNQHVLKPLQYGKSESGTV 289
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 14 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 68
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 93 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 145
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDV 101
SGVLEF A++G + LP +S ++F ++ DV
Sbjct: 146 SGVLEFTAEDGTIGLPPHVWS-NLFSTHDPMDV 177
>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
Length = 778
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 215 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 269
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 297 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 349
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGE----LVNIESVSLPVATFSKFQPQTCDFLDI 325
SGVLEF A++G + LP + NL LV I + LP +++K QP F D+
Sbjct: 350 SGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLGFSDL 409
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
N KA+LE LR A L+ D++ +NY Y+L VLE +P +++++E D+ VD
Sbjct: 410 PNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDIVS-- 467
Query: 386 GYTEPEKVKEKEEDNMIDPVDLMPEPSGFV 415
P+ V ++ +++ P+ SG V
Sbjct: 468 ----PDIVSDQPNQHVLKPLQYGKSESGTV 493
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 14 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 68
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 297 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 349
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDV 101
SGVLEF A++G + LP +S ++F ++ DV
Sbjct: 350 SGVLEFTAEDGTIGLPPHVWS-NLFSTHDPMDV 381
>gi|242053211|ref|XP_002455751.1| hypothetical protein SORBIDRAFT_03g023980 [Sorghum bicolor]
gi|241927726|gb|EES00871.1| hypothetical protein SORBIDRAFT_03g023980 [Sorghum bicolor]
Length = 567
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 233 GGKIIMPPSALEQLTRLNICY--PMLFKLTN----------QKMGRITHSGVLEFVADEG 280
G KI +PPS+ ++L+ PM F+L+ ++ T GVLEF A EG
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDTVPGTSMEQDAEATCCGVLEFTAREG 150
Query: 281 KVYLPYWMMRNLLLD---EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR 337
LP + NL E L+ ++ +SLP T++K +P+ F D+ N +AVLE LR
Sbjct: 151 SAELPLHVWNNLFRSDTPEVPLIEVKYISLPKGTYAKLKPEGAGFSDLPNHRAVLETALR 210
Query: 338 NFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKE 397
N A L+ D + +NY Y+L VLE KP ++V+++E D+ VD + V + E
Sbjct: 211 NHATLSENDTVVVNYGQLEYKLKVLELKPASSVSVLETDVEVDIEG------SDSVLDNE 264
Query: 398 EDNMI 402
ED +
Sbjct: 265 EDQHV 269
>gi|18414447|ref|NP_567465.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|17933289|gb|AAL48228.1|AF446353_1 AT4g15420/dl3755w [Arabidopsis thaliana]
gi|21554166|gb|AAM63245.1| UFD1 like protein [Arabidopsis thaliana]
gi|23506013|gb|AAN28866.1| At4g15420/dl3755w [Arabidopsis thaliana]
gi|111609946|gb|ABH11523.1| UFD1d [Arabidopsis thaliana]
gi|332658201|gb|AEE83601.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 561
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 215 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 269
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 80 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 132
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGE----LVNIESVSLPVATFSKFQPQTCDFLDI 325
SGVLEF A++G + LP + NL LV I + LP +++K QP F D+
Sbjct: 133 SGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLGFSDL 192
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
N KA+LE LR A L+ D++ +NY Y+L VLE +P +++++E D+ VD
Sbjct: 193 PNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDIVS-- 250
Query: 386 GYTEPEKVKEKEEDNMIDPVDLMPEPSGFV 415
P+ V ++ +++ P+ SG V
Sbjct: 251 ----PDIVSDQPNQHVLKPLQYGKSESGTV 276
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 14 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLT---NQKMGRITH 68
+ F F GN G KI +PPS +L+ P+ F+L+ + + TH
Sbjct: 80 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTH 132
Query: 69 SGVLEFVADEGKVYLPYWCFSVSMFPGNEREDV 101
SGVLEF A++G + LP +S ++F ++ DV
Sbjct: 133 SGVLEFTAEDGTIGLPPHVWS-NLFSTHDPMDV 164
>gi|407849648|gb|EKG04327.1| ubiquitin fusion degardation protein, putative [Trypanosoma cruzi]
Length = 308
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 104/180 (57%), Gaps = 15/180 (8%)
Query: 219 VSMFPG--NER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEF 275
++ +PG +ER E V+ GG++++P S L +++ +N+ YP+ F + ++ + ++GVLEF
Sbjct: 15 LAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRH--SVCYAGVLEF 72
Query: 276 VADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENC 335
AD G V +P WM LLL G+ V++E+ LP K +PQ F+ +++P+ VLE
Sbjct: 73 NADNGIVIMPLWMFSALLLQPGDTVSLETCVLPSGKLVKLRPQQSSFIHLSDPRQVLEMH 132
Query: 336 LRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIECD-----MNVDFAPPV 385
L ++ LT G I ++Y + + + V++ + +A++ + D + V+F P+
Sbjct: 133 LSHYPVLTRGTSIMLHYLDRDFIIDVIDITDELDRSVDAISTVRADAQATELKVEFERPL 192
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 18 VSMFPG--NER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEF 74
++ +PG +ER E V+ GG++++P S L +++ +N+ YP+ F + ++ + ++GVLEF
Sbjct: 15 LAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRH--SVCYAGVLEF 72
Query: 75 VADEGKVYLPYWCFSVSMF-PGN 96
AD G V +P W FS + PG+
Sbjct: 73 NADNGIVIMPLWMFSALLLQPGD 95
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 90 VSMFPG--NER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
++ +PG +ER E V+ GG++++P S L +++ +N+ YP+ F + ++ + ++GVLE
Sbjct: 15 LAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRH--SVCYAGVLEF 72
Query: 147 DG 148
+
Sbjct: 73 NA 74
>gi|225447095|ref|XP_002273297.1| PREDICTED: uncharacterized protein LOC100246609 [Vitis vinifera]
Length = 569
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 233 GGKIIMPPSALEQLTR------------LNICY---PMLFKLTNQKMGRITHSGVLEFVA 277
G KI +PPS ++L+ L++ + + K + R TH+GVLEF A
Sbjct: 91 GDKIKLPPSCFKELSDQGAFDKGPLYFGLSVVHQEGSLDTKAAETQNQRTTHAGVLEFTA 150
Query: 278 DEGKVYLPYWMMRNLLLDE---GELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLEN 334
+EG V LP + NL +E LV + + LP T++K Q F DI N KAVLE
Sbjct: 151 EEGSVSLPPHVWSNLFPEETLKSPLVEVRYLWLPKGTYAKLQADGIGFSDIPNHKAVLET 210
Query: 335 CLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVK 394
LR A L+ D++ +N+ Y+L VLE KP ++++++E D+ VD VG P+ V
Sbjct: 211 RLRQHATLSQDDVLIVNHGELTYKLKVLELKPSSSISVLETDIEVDI---VG---PDSVS 264
Query: 395 EKEEDNMIDPVDLMPEPSGFV 415
+ + P++ +G V
Sbjct: 265 GRTNQQFLKPLEFGKSETGMV 285
>gi|407404692|gb|EKF30051.1| ubiquitin fusion degardation protein, putative [Trypanosoma cruzi
marinkellei]
Length = 308
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 219 VSMFPG--NER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEF 275
++ +PG +ER E V+ GG++++P S L +++ +N+ YP+ F + ++ + ++GVLEF
Sbjct: 15 LAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRH--GVCYAGVLEF 72
Query: 276 VADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENC 335
AD G V +P WM LLL G+ V++E+ LP K +PQ F+ +++P+ VLE
Sbjct: 73 NADNGIVIMPLWMFSALLLQPGDTVSLETCVLPSGKLVKLRPQQSSFIHLSDPRQVLEMH 132
Query: 336 LRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIECD-----MNVDFAPPV 385
L ++ LT G I ++Y + + + V++ + A++ + D + V+F P+
Sbjct: 133 LSHYPVLTRGTSIMLHYLDRDFIIDVIDITDELDRSVEAISTVRADAQATELKVEFERPL 192
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 18 VSMFPG--NER-EDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEF 74
++ +PG +ER E V+ GG++++P S L +++ +N+ YP+ F + ++ + ++GVLEF
Sbjct: 15 LAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRH--GVCYAGVLEF 72
Query: 75 VADEGKVYLPYWCFSVSMF-PGN 96
AD G V +P W FS + PG+
Sbjct: 73 NADNGIVIMPLWMFSALLLQPGD 95
>gi|357135127|ref|XP_003569163.1| PREDICTED: uncharacterized protein LOC100845492 [Brachypodium
distachyon]
Length = 569
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLT---------NQKMG--RITHSGVLEFVADE 279
G KI +PPS+ ++L+ PM F+L+ +Q G T GVLEF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDRVPGASQYQGPEEATCCGVLEFTARE 150
Query: 280 GKVYLPYWMMRNLL---LDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
G LP + NL + + L+ + SLP T++K +P+ F D+ N +AVLE L
Sbjct: 151 GSAELPPHVWNNLFQSDIPDVPLIEVRYASLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 210
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
RN A L+ D++ +NY Y+L VLE KP ++V+++E D+ VD P
Sbjct: 211 RNHATLSENDVVVVNYGQLQYKLRVLELKPASSVSVLETDVEVDIEGP 258
>gi|422293758|gb|EKU21058.1| ubiquitin fusion degradation protein 1 [Nannochloropsis gaditana
CCMP526]
Length = 126
Score = 98.6 bits (244), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
+P+ F+ Y +S F ++ +E KI +PPSAL+ L RL+I YPMLF++T + G
Sbjct: 9 LPQVFDEEYNSYS---FVFQDKAHLEGSDKIFLPPSALDTLARLHIDYPMLFQITCRASG 65
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNI 302
+ TH GVLEF A EG YLPYWMM+NLLL+EG + +
Sbjct: 66 KRTHCGVLEFSAAEGSCYLPYWMMQNLLLEEGGFLQV 102
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+P+ F+ Y +S F ++ +E KI +PPSAL+ L RL+I YPMLF++T + G
Sbjct: 9 LPQVFDEEYNSYS---FVFQDKAHLEGSDKIFLPPSALDTLARLHIDYPMLFQITCRASG 65
Query: 65 RITHSGVLEFVADEGKVYLPYW 86
+ TH GVLEF A EG YLPYW
Sbjct: 66 KRTHCGVLEFSAAEGSCYLPYW 87
Score = 55.1 bits (131), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 93 FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
F ++ +E KI +PPSAL+ L RL+I YPMLF++T + G+ TH GVLE
Sbjct: 22 FVFQDKAHLEGSDKIFLPPSALDTLARLHIDYPMLFQITCRASGKRTHCGVLEF 75
>gi|348679632|gb|EGZ19448.1| hypothetical protein PHYSODRAFT_312658 [Phytophthora sojae]
Length = 376
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 10/165 (6%)
Query: 230 VERGGKIIMPPSALEQLTRLNICYPMLFKL-----TNQKMGRITHSGVLEFVADEGKVYL 284
+E G K+++PP L +L I P F + + + + + V EF A EG+V+L
Sbjct: 4 LEFGDKVVLPPKILLELQCSKITTPFQFTIRAAGVNSTEENSLQYCSVQEFSAPEGQVFL 63
Query: 285 PYWMMRNLLLDEGELVNIESVS-LPVATFSKFQPQTCDFLDIT---NPKAVLENCLRNFA 340
PYW+M NL + EG V + SV+ LP + + QP+T FLD+ PK ++E LR ++
Sbjct: 64 PYWLMHNLHVPEGGSVVVSSVTDLPRGIYCRLQPETTSFLDLAAEVGPKLLMETALRRYS 123
Query: 341 CLTSGDMIAINYNSKIYELCVLETKPGNAVTII-ECDMNVDFAPP 384
L+ I I Y + Y + V E KP V++ + D+ DF PP
Sbjct: 124 VLSVNSTIVIEYGNVRYYVRVAELKPAAVVSLCGDVDLETDFMPP 168
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 29 VERGGKIIMPPSALEQLTRLNICYPMLFKL-----TNQKMGRITHSGVLEFVADEGKVYL 83
+E G K+++PP L +L I P F + + + + + V EF A EG+V+L
Sbjct: 4 LEFGDKVVLPPKILLELQCSKITTPFQFTIRAAGVNSTEENSLQYCSVQEFSAPEGQVFL 63
Query: 84 PYW 86
PYW
Sbjct: 64 PYW 66
>gi|123390862|ref|XP_001299964.1| ubiquitin fusion degradation protein [Trichomonas vaginalis G3]
gi|121880919|gb|EAX87034.1| ubiquitin fusion degradation protein, putative [Trichomonas
vaginalis G3]
Length = 409
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 230 VERGGKIIMPPSALEQLTRLNICYPML--FKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
+E G++++P A+ Q+ P + F +TN + + ++G+ + +G + +P W
Sbjct: 19 LEYTGRVMLPLEAIAQIHNNFDNGPTISVFCITNTRTKQKVYAGMAPSDSRDGDIVMPLW 78
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM L ++G++V ++S P + FQP F I++P VL LR+F LT G +
Sbjct: 79 MMDFLGANQGDMVRVQSARPPNGRSATFQPLDSSFNKISDPVTVLSKSLRDFPVLTQGSI 138
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
+ I++ +IY+L VL+T+P + + I ++N +FAPP
Sbjct: 139 LPIDFAKRIYKLRVLKTEPSDGILINNVNLNTEFAPP 175
>gi|290992192|ref|XP_002678718.1| ubiquitin fusion-degradation protein [Naegleria gruberi]
gi|284092332|gb|EFC45974.1| ubiquitin fusion-degradation protein [Naegleria gruberi]
Length = 771
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 213 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQL-TRLNICYPMLFKLTNQKMGRITHSG 271
S +CF V + +E+G K+++PP A +++ N+ +P++F++ K R+ + G
Sbjct: 447 SKRCFDVKV----NLSALEKGNKVLLPPEAADKIFNDPNVEFPLIFEI-QTKHSRV-YCG 500
Query: 272 VLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAV 331
V EF + + +P WM ++L + EG V+I V L A++ K QP + F +I N K V
Sbjct: 501 VSEFTSPSNNIVVPEWMFKSLFITEGAKVSIRCVKLLPASYIKIQPHSKTFYNIENYKQV 560
Query: 332 LENCLRNFACLTSGDMIAI-NYNSKIYELCVLETKPGNAVTIIE-----CDMNVDFAPPV 385
LE L ++C+ G + + + + KI+ + ++ET+P AV+++ ++ +DF P +
Sbjct: 561 LETTLSRYSCVAEGQSLQVYDESDKIHMIEIMETQPSTAVSVLAESSGFMEVEIDFVPAL 620
Query: 386 GYTEPEKVKE 395
+P ++ E
Sbjct: 621 DLYDPSELTE 630
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 12 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQL-TRLNICYPMLFKLTNQKMGRITHSG 70
S +CF V + +E+G K+++PP A +++ N+ +P++F++ K R+ + G
Sbjct: 447 SKRCFDVKV----NLSALEKGNKVLLPPEAADKIFNDPNVEFPLIFEI-QTKHSRV-YCG 500
Query: 71 VLEFVADEGKVYLPYWCF 88
V EF + + +P W F
Sbjct: 501 VSEFTSPSNNIVVPEWMF 518
>gi|125570699|gb|EAZ12214.1| hypothetical protein OsJ_02100 [Oryza sativa Japonica Group]
Length = 569
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 233 GGKIIMPPSALEQLTRLNICY--PMLFKLT-----------NQKMGRITHSGVLEFVADE 279
G KI +PPS+ ++L+ PM F+L+ + T GVLEF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGAPQDNDADEATCCGVLEFTARE 150
Query: 280 GKVYLPYWMMRNLLLDEGE---LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
G L + NL + L+ + VSLP T++K +P+ F D+ N +AVLE L
Sbjct: 151 GSAELTPHVWNNLFRGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 210
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
RN A L+ D + +NY Y+L VLE KP ++V+++E D+ VD P
Sbjct: 211 RNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|115437276|ref|NP_001043255.1| Os01g0534800 [Oryza sativa Japonica Group]
gi|57899277|dbj|BAD87678.1| putative PRLI-interacting factor K [Oryza sativa Japonica Group]
gi|113532786|dbj|BAF05169.1| Os01g0534800 [Oryza sativa Japonica Group]
Length = 569
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLT-----------NQKMGRITHSGVLEFVADE 279
G KI +PPS+ ++L+ PM F+L+ + T GVLEF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGAPQDNDADEATCCGVLEFTARE 150
Query: 280 GKVYLPYWMMRNLLLDEGE---LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
G L + NL + L+ + VSLP T++K +P+ F D+ N +AVLE L
Sbjct: 151 GSAELTPHVWNNLFRGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 210
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
RN A L+ D + +NY Y+L VLE KP ++V+++E D+ VD P
Sbjct: 211 RNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|125526295|gb|EAY74409.1| hypothetical protein OsI_02297 [Oryza sativa Indica Group]
Length = 504
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLT-----------NQKMGRITHSGVLEFVADE 279
G KI +PPS+ ++L+ PM F+L+ + T GVLEF A E
Sbjct: 26 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGARQDNDADEATCCGVLEFTARE 85
Query: 280 GKVYLPYWMMRNLLLDEGE---LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
G L + NL + L+ + VSLP T++K +P+ F D+ N +AVLE L
Sbjct: 86 GSAELTPHVWNNLFRGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 145
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
RN A L+ D + +NY Y+L VLE KP ++V+++E D+ VD P
Sbjct: 146 RNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 193
>gi|440795041|gb|ELR16182.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 647
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 215 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--------TNQKMGR 266
+CFS S GN R D RG K+++P + LE+ + +P F++ +
Sbjct: 181 QCFS-SAVGGNPRLD--RGDKVVLPAAVLEEAVHKGLPFPYTFRVRKVDAESPADADASP 237
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI- 325
I H G L+F A G YLP +M L L EG+ V+++SV LP +++ QPQ+ ++DI
Sbjct: 238 IAHCGALDFEAPAGMCYLPASIMAKLALQEGDHVSLKSVRLPKGEYAQLQPQSASWIDIP 297
Query: 326 -TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPP 384
+A+L + LRN+ LT GD + +++ S+ + V + P + + + + A P
Sbjct: 298 MATREAILADQLRNYQTLTVGDTVRLSHGSQDHRFHVTKVLPAPSHEMRDDSADAQLAVP 357
Query: 385 V 385
Sbjct: 358 A 358
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 14 KCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL--------TNQKMGR 65
+CFS S GN R D RG K+++P + LE+ + +P F++ +
Sbjct: 181 QCFS-SAVGGNPRLD--RGDKVVLPAAVLEEAVHKGLPFPYTFRVRKVDAESPADADASP 237
Query: 66 ITHSGVLEFVADEGKVYLP 84
I H G L+F A G YLP
Sbjct: 238 IAHCGALDFEAPAGMCYLP 256
>gi|212275943|ref|NP_001130331.1| uncharacterized protein LOC100191426 [Zea mays]
gi|194688866|gb|ACF78517.1| unknown [Zea mays]
gi|413948217|gb|AFW80866.1| hypothetical protein ZEAMMB73_365866 [Zea mays]
Length = 567
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 233 GGKIIMPPSALEQLTRLNIC--YPMLFKLTN----------QKMGRITHSGVLEFVADEG 280
G KI +PPS+ ++L+ PM F+L+ ++ T GVLEF A EG
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDTVPGAAMEQDAGTTCCGVLEFTAREG 150
Query: 281 KVYLPYWMMRNLLLD---EGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR 337
LP + NL E L+ ++ SL T++K +P+ F D+ N +AVLE LR
Sbjct: 151 SAELPLHVWNNLFGSDTPEVPLIEVKYTSLLKGTYAKLKPEGGGFSDLPNHRAVLETALR 210
Query: 338 NFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
N A L+ D + +NY Y+L VLE KP ++V+++E D+ VD
Sbjct: 211 NHATLSENDTVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDI 254
>gi|70952278|ref|XP_745318.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525603|emb|CAH79199.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 166
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 15/140 (10%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L L EG++V + S+SLP TF K +P + DF++++N + VLE LRN+A LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDL 407
I I+Y K YE+ +++ KP A TIIE D+ V+F EKV+ EE + PV
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETDVEVEFE-----EPFEKVQYVEE---VIPV-- 110
Query: 408 MPEPSGFVAFHGTGNRLDGK 427
E S F G G R DGK
Sbjct: 111 --EES---KFKGKGQRTDGK 125
>gi|68075987|ref|XP_679913.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500762|emb|CAH93868.1| conserved hypothetical protein [Plasmodium berghei]
Length = 132
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 61/89 (68%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L L EG++V + S+SLP TF K +P + DF++++N + VLE LRN+A LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECD 376
I I+Y K YE+ +++ KP A TIIE D
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETD 89
>gi|83273516|ref|XP_729433.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23487211|gb|EAA20998.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 105
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 61/89 (68%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDM 347
MM+ L L EG++V + S+SLP TF K +P + DF++++N + VLE LRN+A LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 348 IAINYNSKIYELCVLETKPGNAVTIIECD 376
I I+Y K YE+ +++ KP A TIIE D
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETD 89
>gi|209733504|gb|ACI67621.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
Length = 81
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
Query: 198 FGFNMFPD-IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNI 251
F FNMF IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 252 CYPMLFKLTNQKMGRITH 269
YPMLFKLT ++ TH
Sbjct: 62 TYPMLFKLTYCRLYIPTH 79
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 5/69 (7%)
Query: 5 IPRPF-NR---SYKCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLT 59
IPR F NR Y+C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT
Sbjct: 11 IPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLT 70
Query: 60 NQKMGRITH 68
++ TH
Sbjct: 71 YCRLYIPTH 79
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 76 ADEGKVYLPYWCFSVSMFPG-NEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQK 134
A + + Y C+SVSM G N+R DVE+GGKIIMPPSAL+QL+RLNI YPMLFKLT +
Sbjct: 14 AFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTYCR 73
Query: 135 MGRITH 140
+ TH
Sbjct: 74 LYIPTH 79
>gi|399949665|gb|AFP65323.1| ubiquitin fusion degradation protein [Chroomonas mesostigmatica
CCMP1168]
Length = 293
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 213 SYKCFSVSM-FPGNEREDVERGGKIIMPPSALEQLT--RLNICYPMLFKL---TNQKMG- 265
SYKCFS+S+ + E ++ R I PPS L +L N YPM F+L + + G
Sbjct: 18 SYKCFSMSLQYYKCEHQESNRA---IFPPSLLSRLKIENYNRNYPMFFELGCNLSDENGN 74
Query: 266 -RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLP-----VATFSKFQPQT 319
+ TH G EF+ +EG LP W++ N + G +SV LP V + P
Sbjct: 75 PKKTHIGAAEFIGEEGIALLPEWVLENANIKNGGNGFFKSVYLPRAENLVMVPRELSPGE 134
Query: 320 CDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNV 379
+FL K ++E LRN CLT D+I + SK L V + KPG+AV++I D+
Sbjct: 135 GEFL-----KVIMEKKLRNIICLTVSDVIPVRLGSKTITLIVKDVKPGSAVSLINNDIQF 189
Query: 380 DFAPP 384
++ P
Sbjct: 190 SYSIP 194
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 12 SYKCFSVSM-FPGNEREDVERGGKIIMPPSALEQLT--RLNICYPMLFKL---TNQKMG- 64
SYKCFS+S+ + E ++ R I PPS L +L N YPM F+L + + G
Sbjct: 18 SYKCFSMSLQYYKCEHQESNRA---IFPPSLLSRLKIENYNRNYPMFFELGCNLSDENGN 74
Query: 65 -RITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGG 105
+ TH G EF+ +EG LP W E +++ GG
Sbjct: 75 PKKTHIGAAEFIGEEGIALLPEWVL--------ENANIKNGG 108
>gi|157877892|ref|XP_001687240.1| putative ubiquitin fusion degradation protein [Leishmania major
strain Friedlin]
gi|68130315|emb|CAJ09627.1| putative ubiquitin fusion degradation protein [Leishmania major
strain Friedlin]
Length = 325
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSI---NQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKK 60
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R+ ++ VLEF A G V LP WM ++L L +V ++S SLP + K +P +
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMF 119
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLE 363
NP+ +LE L + LT G I I+Y + ++L +++
Sbjct: 120 ENPRHLLELRLAQYPVLTKGTTIVISYVDREFQLDLVD 157
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSI---NQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKK 60
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
R+ ++ VLEF A G V LP W F
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMF 83
>gi|146102600|ref|XP_001469375.1| putative ubiquitin fusion degradation protein [Leishmania infantum
JPCM5]
gi|398025256|ref|XP_003865789.1| ubiquitin fusion degradation protein, putative [Leishmania
donovani]
gi|134073745|emb|CAM72482.1| putative ubiquitin fusion degradation protein [Leishmania infantum
JPCM5]
gi|322504026|emb|CBZ39113.1| ubiquitin fusion degradation protein, putative [Leishmania
donovani]
Length = 325
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSV---HQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKK 60
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R+ ++ VLEF A G V LP WM ++L L +V ++S SLP + K +P +
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMF 119
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIECD---- 376
NP+ +LE L + LT G I I+Y + ++L +++ + N + + D
Sbjct: 120 ENPRHLLELRLAQYPVLTKGTTIVISYVDREFQLDLVDIIDMKQERVNGILTVRADGAPV 179
Query: 377 -MNVDFAPPV 385
+ VDF P+
Sbjct: 180 ELKVDFERPL 189
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSV---HQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKK 60
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
R+ ++ VLEF A G V LP W F
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMF 83
>gi|401421036|ref|XP_003875007.1| putative ubiquitin fusion degradation protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491243|emb|CBZ26509.1| putative ubiquitin fusion degradation protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 325
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 206 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 265
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSV---NQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPGKK 60
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI 325
R+ ++ VLEF A G V LP WM ++L L +V ++S SLP + K +P +
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMF 119
Query: 326 TNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLE 363
NP+ +LE L + LT G I I+Y + ++L +++
Sbjct: 120 ENPRHLLELRLAQYPVLTKGTTIVISYVDREFQLDLVD 157
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 5 IPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG 64
+P+P+ S S ++ + G ++++P S L+ L R+ + YP+ F++
Sbjct: 4 LPQPYETRLVAVSASSV---NQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPGKK 60
Query: 65 RITHSGVLEFVADEGKVYLPYWCF 88
R+ ++ VLEF A G V LP W F
Sbjct: 61 RV-YAAVLEFNAQAGSVVLPDWMF 83
>gi|154346716|ref|XP_001569295.1| putative ubiquitin fusion degradation protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066637|emb|CAM44436.1| putative ubiquitin fusion degradation protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 325
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
++ + G ++++P S L+ L R+ + YP+ F++ R+ ++ VLEF A G V LP
Sbjct: 22 QQRINYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV-YAAVLEFNAQAGSVVLPD 80
Query: 287 WMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGD 346
WM ++L L +V ++S SLP + K +P + NP+ +LE L + LT G
Sbjct: 81 WMFQHLGLRGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRNLLELRLAQYPVLTKGT 140
Query: 347 MIAINYNSKIYELCVLET-----KPGNAVTIIECD-----MNVDFAPPV 385
I I+Y + ++L ++E + N + + D + VDF P+
Sbjct: 141 TIVISYVDREFQLDLVEIIDMKQQLVNGILTVRADGAPVMLKVDFERPL 189
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 85
++ + G ++++P S L+ L R+ + YP+ F++ R+ ++ VLEF A G V LP
Sbjct: 22 QQRINYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV-YAAVLEFNAQAGSVVLPD 80
Query: 86 WCF 88
W F
Sbjct: 81 WMF 83
>gi|320167025|gb|EFW43924.1| ubiquitin fusion degradation protein [Capsaspora owczarzaki ATCC
30864]
Length = 857
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDI--T 326
H GVL+F DEG LP WMM+++ + G+ V LP F K QP + +L +
Sbjct: 327 HGGVLDFTTDEGTAILPSWMMKHIGAETGDQVVFRYAKLPKGEFVKLQPVSTTWLAVPFE 386
Query: 327 NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
++VLE LRN+ LT G ++I ++ ++ VLE KP A++II+ D+ D P+
Sbjct: 387 QRRSVLEYHLRNYQTLTEGMTVSIEHHQSQHDFKVLECKPARAISIIDTDIVTDVVEPL 445
>gi|348680464|gb|EGZ20280.1| hypothetical protein PHYSODRAFT_497564 [Phytophthora sojae]
Length = 522
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLT------------------NQKMGRITHSGVLE 274
G KI +P SALE+L N +F N + R+TH+GVLE
Sbjct: 91 GDKISLPVSALEELNPQNALERGVFTFELSFEQQQQKQEEEEEAGENVPLKRLTHAGVLE 150
Query: 275 FVADEGKVYLPYWMMRNLLLDEGEL---VNIESVSLPVATFSKFQPQTCDFLD-ITNPKA 330
FVA+EG V LP + +L +L V + V L F+ QP+ F D + K
Sbjct: 151 FVAEEGTVGLPPKVAASLFGQSRQLPDSVQVRFVRLEKGQFASLQPRGDGFSDRQIDFKH 210
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYT-- 388
+LE L+ LT GD++ + + + +E+ V E +P AV I+ D+ VD P
Sbjct: 211 MLERSLKAHTTLTEGDVLFVRHGRETFEVLVAELRPERAVNILNTDLEVDIIPSEAVAKA 270
Query: 389 -EPEKVKEKEEDNMI 402
E +K++E+E ++
Sbjct: 271 KEADKLREEEAARVV 285
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 18/71 (25%)
Query: 32 GGKIIMPPSALEQLTRLNICYPMLFKLT------------------NQKMGRITHSGVLE 73
G KI +P SALE+L N +F N + R+TH+GVLE
Sbjct: 91 GDKISLPVSALEELNPQNALERGVFTFELSFEQQQQKQEEEEEAGENVPLKRLTHAGVLE 150
Query: 74 FVADEGKVYLP 84
FVA+EG V LP
Sbjct: 151 FVAEEGTVGLP 161
>gi|145509186|ref|XP_001440537.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407754|emb|CAK73140.1| unnamed protein product [Paramecium tetraurelia]
Length = 285
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 215 KCFSVSMFPGNERED--VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ-KMGRITHSG 271
+C ++ ++ + + + G +I++PPS L ++ + C M FKL + + + + G
Sbjct: 5 QCGTLEVYSASSQNKKIINHGNRILLPPSILLEICNV-YCGTMTFKLQSVLEEKKSIYVG 63
Query: 272 VLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSL-PVATFSKFQPQTCDFLDITNPKA 330
VLEF ADEG +P W+ + G + I + + K QP F+ +++PK
Sbjct: 64 VLEFTADEGTCVVPDWIFDAMGFSNGLSIPINCNRINKFGSLIKVQPHKSAFIKLSDPKD 123
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP---GNAVTIIECDMNVDFAPPVGY 387
+L+ L+NF CLT + I INY Y + +++ +P NA+ I E ++D P+
Sbjct: 124 ILKTYLKNFTCLTQDETITINYQDVNYLIDIVKVEPINKHNAICIDEFYFDIDLMDPLDL 183
Query: 388 T-EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGK 427
T P+ + E E + +P F G G + G+
Sbjct: 184 TVHPKLLFESSEAQQEKIITCEQQP----VFQGIGILIGGE 220
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 14 KCFSVSMFPGNERED--VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQ-KMGRITHSG 70
+C ++ ++ + + + G +I++PPS L ++ + C M FKL + + + + G
Sbjct: 5 QCGTLEVYSASSQNKKIINHGNRILLPPSILLEICNV-YCGTMTFKLQSVLEEKKSIYVG 63
Query: 71 VLEFVADEGKVYLPYWCFSVSMF 93
VLEF ADEG +P W F F
Sbjct: 64 VLEFTADEGTCVVPDWIFDAMGF 86
>gi|219127600|ref|XP_002184020.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404743|gb|EEC44689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 320
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 38/207 (18%)
Query: 192 AHKEFQFGFNMFPDIPRPFNRSYKC--------FSVSMFPGNEREDVE-RGGKIIMPPSA 242
+HK Q G M +P F ++ + FSV G E VE II P
Sbjct: 113 SHKHVQTGDKM--SLPANFWQAIQLNHAEVPWLFSVKRIDGVTGERVEFSDDDIITPHKP 170
Query: 243 LEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNI 302
L QL ++ G L+F A ++LP+WMMR L + ++V +
Sbjct: 171 LAQLDKVV-------------------GGPLDFRAPACYIFLPWWMMRALGVKPRDIVEV 211
Query: 303 ESV-SLPVATFSKFQPQTCDF-LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELC 360
E ++P + +K +P + DF +I NP+AVLE LR+++ LT G IA +YN K Y
Sbjct: 212 ELFETVPAGSLAKLRPHSSDFGKEIANPQAVLETELRHYSSLTQGSTIAFDYNKKRYWFD 271
Query: 361 VLETKPG------NAVTIIECDMNVDF 381
V+E + + V + +CD+ DF
Sbjct: 272 VVELRSAPRGEKSSMVKVQDCDIATDF 298
>gi|384485380|gb|EIE77560.1| hypothetical protein RO3G_02264 [Rhizopus delemar RA 99-880]
Length = 646
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 8/174 (4%)
Query: 229 DVERGGKIIMPPSALEQLT----RLNICYPMLFKLTNQKMGRITHSGVLEFVADEG-KVY 283
D+ G KI +P ALEQL + P+ F+L + G H GV EF +
Sbjct: 21 DLNYGDKIKLPAIALEQLLAKAGHSTLPSPLTFELRHPHSGAFIHCGVKEFASSSSDSAE 80
Query: 284 LPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACL 342
LP W+M L L G+ V I+ LP T+++ +P + ++ DIT+ +A LE LR ++ L
Sbjct: 81 LPEWIMTALGLKAGDRVLIKLQLLPKGTWTQLKPLSDNYQDITDYRAALEAHLRGHYNTL 140
Query: 343 TSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF--APPVGYTEPEKVK 394
T G ++ Y + Y V E KP AV I + D+ VD + +G+ + + K
Sbjct: 141 TKGQVLFCRYGEQTYPFQVTELKPQEAVLINDTDLEVDIEGSANIGHQQSDHTK 194
>gi|440803128|gb|ELR24040.1| ubiquitin fusion degradation protein ufd1 protein [Acanthamoeba
castellanii str. Neff]
Length = 392
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 227 REDVERGGKIIMPPSALEQLTRL-NICYPMLFKLTNQKMGRITH-SGVLEFVADEGKVY- 283
R D+E G KII+ L +L L P+LF++ + +T +GV +F A V
Sbjct: 25 RPDIEYGNKIILGSEVLGRLGGLVEEASPLLFQVASFSSPMLTAFAGVADFTAPHSSVVV 84
Query: 284 LPYWMMRNLLLDEGELV--NIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFAC 341
LP WMM +L L +G+ V N+ + LP TF + +P + + NPKAVLE L C
Sbjct: 85 LPRWMMDSLELKDGDEVRINLAAPPLPQGTFVRLRPSDGAWGALENPKAVLEEHLSYHYC 144
Query: 342 -LTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP-PVGYTEPEKVKEKEED 399
LT G + I + ++ L V E +P ++ I+E + VD P P E ++V + + D
Sbjct: 145 SLTQGTDVWIRWQDVVHRLHVEECQPAESIQIVEVRLEVDLLPAPHSGREADRVCDLQLD 204
Query: 400 N 400
+
Sbjct: 205 S 205
>gi|154346738|ref|XP_001569306.1| putative ubiquitin fusion degradation protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066648|emb|CAM44447.1| putative ubiquitin fusion degradation protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 165
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 209 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 268
P + + +VS N++ + G ++++P S L+ L R+ + YP+ F++ R+
Sbjct: 5 PQSYETRLVAVSASSVNQQR-INYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV- 62
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
++ VLEF A G V LP WM ++L L +V ++S SLP + K +P + NP
Sbjct: 63 YAAVLEFNAQAGSVVLPDWMFQHLGLRGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENP 122
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLE 363
+ +LE L + LT G I I+Y + ++L ++E
Sbjct: 123 RNLLELRLAQYPVLTKGTTIVISYVDREFQLDLVE 157
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 8 PFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRIT 67
P + + +VS N++ + G ++++P S L+ L R+ + YP+ F++ R+
Sbjct: 5 PQSYETRLVAVSASSVNQQR-INYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV- 62
Query: 68 HSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQL 117
++ VLEF A G V LP W F G V+ +PP +L +L
Sbjct: 63 YAAVLEFNAQAGSVVLPDWMFQHLGLRGTMVVKVQSCS---LPPGSLVKL 109
>gi|429963358|gb|ELA42902.1| hypothetical protein VICG_00217 [Vittaforma corneae ATCC 50505]
Length = 236
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 220 SMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADE 279
S +P N + K+++P L+ L NI P +F+++++ T VL+F+ D+
Sbjct: 20 SKYPKNSENN--YTSKVLLPHYVLKDLVAFNIQPPYVFEISHENGIYKTVCSVLDFLLDD 77
Query: 280 GKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNF 339
+V +P WM L LD + V ++ + + K P + +FL++ N K LE L N+
Sbjct: 78 DEVVVPSWMFEQLCLDTADKVFLKQIEIEKGEGVKLLPHSVEFLELENHKKELEKTLTNY 137
Query: 340 ACLTSGDMIAINYN---------SKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
L+ GD I + + +KIY + + + I++ D+ VDF P+GY E
Sbjct: 138 HVLSYGDEILLYFEEIGKCRFTVTKIY------PEHLDVIYIVDTDLKVDFDEPLGYKE 190
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 19 SMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADE 78
S +P N + K+++P L+ L NI P +F+++++ T VL+F+ D+
Sbjct: 20 SKYPKNSENN--YTSKVLLPHYVLKDLVAFNIQPPYVFEISHENGIYKTVCSVLDFLLDD 77
Query: 79 GKVYLPYWCFSVSMFPGNERE-----DVERGGKIIMPPSALEQL 117
+V +P W F ++ ++E+G + + P ++E L
Sbjct: 78 DEVVVPSWMFEQLCLDTADKVFLKQIEIEKGEGVKLLPHSVEFL 121
>gi|428184700|gb|EKX53554.1| hypothetical protein GUITHDRAFT_160865 [Guillardia theta CCMP2712]
Length = 392
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 227 REDVERGGKIIMPPSALEQLT---RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVY 283
RE+ ++ +PPSAL L +++ P+ F+LT ++ GR TH GVLEFVA+E +
Sbjct: 89 REEWSHSDRVTLPPSALNALQFKGAIDVGGPLFFELTTKEGGR-THCGVLEFVAEEETIG 147
Query: 284 LPYWMM--------RNLLLDEGELVNIES--VSLPVATFSKFQPQTCDF------LDITN 327
+P + N ++ G I++ V LP QP+ F LD+
Sbjct: 148 IPPKVQMCLGAVTEANETIEGGFSTRIQTKYVRLPKGESVSLQPRNKSFSDYMSSLDMKQ 207
Query: 328 PK----------------AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVT 371
K VL L+ + LT GD++ + +N K +EL VL+ +P +AV
Sbjct: 208 SKPVYDSSRGKWVLPGLEGVLHTALQGLSTLTVGDVVKVVHNDKEFELQVLQLQPEDAVM 267
Query: 372 IIECDMNVDFAPPVGYT------EPEKVKEKEEDNMIDPV----------DLMPEPSG 413
+++ D+ VD P E K +E EE+ + + L PEP+G
Sbjct: 268 LVDTDIQVDITPSKAEVDEMEAEEARKRREAEENEKKERIIADRKKSAQSRLTPEPAG 325
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 26 REDVERGGKIIMPPSALEQLT---RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVY 82
RE+ ++ +PPSAL L +++ P+ F+LT ++ GR TH GVLEFVA+E +
Sbjct: 89 REEWSHSDRVTLPPSALNALQFKGAIDVGGPLFFELTTKEGGR-THCGVLEFVAEEETIG 147
Query: 83 LP 84
+P
Sbjct: 148 IP 149
>gi|431894842|gb|ELK04635.1| Ubiquitin fusion degradation protein 1 like protein [Pteropus
alecto]
Length = 133
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 18/99 (18%)
Query: 341 CLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEE-- 398
CLT+GD+IAINYN +IYEL V+ETKP AV+I ECD+NVDF P+GY EPE+ + EE
Sbjct: 42 CLTTGDVIAINYN-EIYELRVMETKPDKAVSITECDVNVDFDAPLGYKEPERQVQHEEST 100
Query: 399 --------DNMIDPVDLMPEPSGFVAFHGTGNRLDGKRK 429
++M++ MP P+ G G+RK
Sbjct: 101 EGKTDHRTEDMLESWASMPSPA-------LGTDWMGRRK 132
>gi|307111367|gb|EFN59601.1| hypothetical protein CHLNCDRAFT_56460 [Chlorella variabilis]
Length = 441
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 235 KIIMPPSALEQLTRLNICY--PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL 292
KI++PPSA L + PM F+LTN G TH+G+LEF A EG V LP ++ +L
Sbjct: 106 KILLPPSAGASLMSQDAYKNGPMFFQLTN-AAGNRTHAGLLEFSAAEGFVALPRKVICSL 164
Query: 293 L---LDEGELVNIESVS---LPVATFSKFQPQTCDFLDITNP--KAVLENCLRNFACLTS 344
E V V+ LP + FQP++ F + VLE L +CLT
Sbjct: 165 WGPDATEEHCVGRLRVAYRRLPKGERAVFQPRSASFQQEVGEDIRGVLEGALLQHSCLTR 224
Query: 345 GDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
GD +A+ + + Y+L + + P AV++I+ D+ + P
Sbjct: 225 GDWLAVPHGGQRYDLRICDLHPEAAVSVIDTDLEAEINP 263
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 34 KIIMPPSALEQLTRLNICY--PMLFKLTNQKMGRITHSGVLEFVADEGKVYLP 84
KI++PPSA L + PM F+LTN G TH+G+LEF A EG V LP
Sbjct: 106 KILLPPSAGASLMSQDAYKNGPMFFQLTN-AAGNRTHAGLLEFSAAEGFVALP 157
>gi|301097625|ref|XP_002897907.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106655|gb|EEY64707.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 512
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLT-----NQKMGRI------THSGVLEFVADEGK 281
G KI +P SALE+L N +F +Q+ G TH+GVLEFVA+E
Sbjct: 91 GDKITLPVSALEELNPQNALDLGVFTFELSFDDDQQGGEAPTVRSQTHAGVLEFVAEERT 150
Query: 282 VYLPYWMMRNLLLDEGEL---VNIESVSLPVATFSKFQPQTCDFLD-ITNPKAVLENCLR 337
V LP + +L +L + + V L F+ +P+ F D + K +LE L+
Sbjct: 151 VGLPPKVAASLFRYTKQLPASIQVRFVRLEKGKFASLRPKGEGFGDRQIDFKHMLERSLK 210
Query: 338 NFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKE 397
LT GD++ + + + +E+ V E KP A+ I+ D+ VD P T+ ++ K++
Sbjct: 211 AHTTLTEGDVLFVRHGRETFEVLVTELKPDRAINILNTDLEVDMIPCEAVTKKKEAKKRV 270
Query: 398 EDNMIDPVDLMPEPSGFVA 416
E+ + L E + A
Sbjct: 271 EEEAVRTAALTREKELWKA 289
>gi|298709434|emb|CBJ31340.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 521
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 81/239 (33%)
Query: 233 GGKIIMPPSALEQLTRLNICY--PMLFKLTNQKMGRI----------------------- 267
G KI++PPSALE L+R + PMLF+LT G
Sbjct: 93 GDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRT 152
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLL-----------LDEG------------------- 297
TH+GVLEFVADEG + LP ++ +LL DE
Sbjct: 153 THAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEG 212
Query: 298 -ELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKI 356
E V + V L ATF++ P+T ++ +A+LE+ +RN A LT GD +++ K
Sbjct: 213 LENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKE 272
Query: 357 YEL-------------------CVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEK 396
+ L V+E +P VT+I+ DM ++ PEK +E+
Sbjct: 273 FSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIEL------DLPEKAREQ 325
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 25/78 (32%)
Query: 32 GGKIIMPPSALEQLTRLNICY--PMLFKLTNQKMGRI----------------------- 66
G KI++PPSALE L+R + PMLF+LT G
Sbjct: 93 GDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRT 152
Query: 67 THSGVLEFVADEGKVYLP 84
TH+GVLEFVADEG + LP
Sbjct: 153 THAGVLEFVADEGTIGLP 170
>gi|123457022|ref|XP_001316242.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898943|gb|EAY04019.1| hypothetical protein TVAG_055050 [Trichomonas vaginalis G3]
Length = 214
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 213 SYKCFSVSMFPGNE-REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSG 271
S++ + +FP R+++ GKII+P + + +L + M F L N + +G
Sbjct: 2 SFRSTFLVVFPETVGRKELNETGKIILPSTIIAKLRNETL---MQFLLKNPLTQKTIGAG 58
Query: 272 VLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAV 331
V EF ++E +P WM NL L E + + ++ P FQP + +I N K +
Sbjct: 59 VEEFSSEEPSCVVPRWMCENLGLTENDKIVVQFQKFPKIKELIFQPSDNESANILNEKQI 118
Query: 332 -LENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
+E LR++ LT G ++ IN+ +K++ L VL TKP V + + V F+ P+
Sbjct: 119 IMEYTLRSYPVLTQGSILVINFANKMFFLKVLFTKPERIVNTLSSNPTVTFSRPL 173
>gi|340057372|emb|CCC51717.1| putative ubiquitin fusion degradation protein [Trypanosoma vivax
Y486]
Length = 287
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 230 VERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMM 289
+E ++++P L +L+ ++ YP+ F++ + + ++GVL+F A G + +P WMM
Sbjct: 33 IESSARVLLPFDCLAELSSKSVPYPLQFRI--RSGFKTCYAGVLDFTAPTGIIIVPQWMM 90
Query: 290 RNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIA 349
L ++ G+ V IE+ L K +PQ F+++++P+ VLE L + LT G I
Sbjct: 91 PALGVEVGDTVLIETCVLSPGKLIKLRPQESSFIELSDPRQVLEMRLNEYPVLTKGTSIV 150
Query: 350 INYNSKIYELCVLET--KPGNAVTII 373
+ Y + + V++ + GN V I
Sbjct: 151 LQYAGHDFIIDVIDILDEAGNTVDAI 176
>gi|325180374|emb|CCA14777.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325192321|emb|CCA26767.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 507
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMG-------RITHSGVLEFVADEGKVYLP 285
G I +PPSALE+LT F M ++TH+ VLEF A+E + +P
Sbjct: 91 GDLITLPPSALEELTAQEAFRVGKFTFELSVMLPNVAPCLQVTHASVLEFTAEEETIGVP 150
Query: 286 YWMMRNLLLDEG--ELVNIESVSLPVATFSKFQPQTCDF----LDITNPKAVLENCLRNF 339
+ R LL + + + I V L F++FQP+ F +D+ K VLE L
Sbjct: 151 PKVARCLLFSQSVPKSIQIRFVRLERGLFARFQPKEEGFGAREIDL---KLVLERSLHRH 207
Query: 340 ACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
LT GD + + + K +E+ V+ +P A+ I+ D+ VD P
Sbjct: 208 TTLTIGDTVLVRHGRKTFEISVIHAEPEEAIDILNTDLEVDIMP 251
>gi|387219253|gb|AFJ69335.1| ubiquitin fusion degradation 1 [Nannochloropsis gaditana CCMP526]
Length = 264
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 234 GKIIMPPSALEQLTRLNICY---------PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 284
G+ + PP E +T L+ Y P L + + H+ +F A E +++
Sbjct: 64 GRKLEPPWHFE-ITPLDDLYTGAPSPFLAPSLAHWRRRHPVQALHASNFDFRAPENYIFM 122
Query: 285 PYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTS 344
P WMM +L L ++V + V LP FQP F + N AVLE L+ ++C+T
Sbjct: 123 PDWMMLSLRLRPRDVVAMRFVRLPEGGLVSFQPHQAAFNKLANVHAVLEQELKYYSCVTQ 182
Query: 345 GDMIAINYNSKIYELCVLET-----KPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKE 397
G I +N K Y L VLET +A+ I + D+ D P E EK++ ++
Sbjct: 183 GTTIRFKHNGKEYALDVLETLGPKDVKVDAIKIQDSDIRTDIRPS---KEEEKIRRRK 237
>gi|119179624|ref|XP_001241369.1| hypothetical protein CIMG_08532 [Coccidioides immitis RS]
gi|392866712|gb|EAS30114.2| ubiquitin fusion degradation protein [Coccidioides immitis RS]
Length = 761
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 72/238 (30%)
Query: 217 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 249
+S S F P N RG KI +PPSALE +
Sbjct: 7 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYNPSVFESFNRYTPST 66
Query: 250 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
+ YP+ F++ N K GR+ HSG+LEF A+E +V L +++++L + +
Sbjct: 67 SFVNNEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQP 126
Query: 298 EL-----------------------------VNIESVSLPVATFSKFQPQTCDFLDITNP 328
EL + I +V LP T+ + +P + DI +
Sbjct: 127 ELESHPRLSDLGQGEHAAEDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DIDDW 185
Query: 329 KAVLENCL-RNFACLTSGDMIAINYN-SKIYELCVLETKP-GNAVTIIECDMNVDFAP 383
KA+LE L NF LT G+ +A++ ++++L V + +P G+A+ +++ D+ VD P
Sbjct: 186 KALLERYLGANFTTLTVGESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVDIEP 243
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 39/107 (36%)
Query: 16 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 48
+S S F P N RG KI +PPSALE +
Sbjct: 7 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYNPSVFESFNRYTPST 66
Query: 49 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
+ YP+ F++ N K GR+ HSG+LEF A+E +V L
Sbjct: 67 SFVNNEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVAL 113
>gi|296818223|ref|XP_002849448.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
gi|238839901|gb|EEQ29563.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
Length = 760
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 59/274 (21%)
Query: 213 SYKCFSVSMFPGNEREDVERGGKIIMPPSALEQL---TRLN------------------- 250
S+ C +S+ P N+ + + G KI +P SALEQ+ R N
Sbjct: 5 SWTC-KLSVTPPNKTQKLT-GDKITLPQSALEQILAAVRSNPSSTLANPLSTDFNSHNSF 62
Query: 251 ---------ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM-----MRNLLLDE 296
+ +P+ F+L N GR HSG+ EF ADE +V L ++ + +L LD
Sbjct: 63 GTNDPRQQELPHPLTFRLVNPLNGRAVHSGIREFSADENEVSLSPFIRESLGIEHLNLDT 122
Query: 297 GE---------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGD 346
G V +++V LP ++ + +P + D+ + KA+LE LR N+ LT G+
Sbjct: 123 GSGTPPPNTLPTVTVQAVQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLTVGE 181
Query: 347 MIAINYNSK-IYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP 404
++ + N K + + + +P GNA+ I++ D+ VD P E +K K +
Sbjct: 182 VLPVLANRKETMQFLIDKVQPEGNAICIVDTDLEVDIEPMDEDQARESLKRK-----LAK 236
Query: 405 VDLMPEPSGFVAFHGT---GNRLDGKRKKKDTVE 435
E +G + GT G ++G+ ++ D V+
Sbjct: 237 SSRASEYAGQSSIGGTVTDGQEVNGQVRQGDYVD 270
>gi|326435957|gb|EGD81527.1| hypothetical protein PTSG_02246 [Salpingoeca sp. ATCC 50818]
Length = 720
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 235 KIIMPPSALEQL-TRLNICYPMLFKLTNQKMGRI---THSGVLEFVADEGKVYLPYWMMR 290
+I++P SAL +L R+ + P+L + +K+ + V F A E +P W+++
Sbjct: 24 RIVLPSSALHELHDRMELGKPLLLRAAVRKISKAEDKVACSVHSFNAPENTAIVPGWLLQ 83
Query: 291 NLLLDEGELVNIESVS-LPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMI 348
L L G + +E V LP A F +F+ F + N KAVLE L N+ LT G I
Sbjct: 84 QLKLSPGSKIWLELVDELPTAEFCRFRVLDEAFFKLQNHKAVLERALEGNYRTLTEGSTI 143
Query: 349 AINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
+++ Y+L VLE P ++I+ D+ VD
Sbjct: 144 RVDHLGIAYKLEVLELLPERQCSLIDADLEVDL 176
>gi|320036115|gb|EFW18055.1| ubiquitin fusion degradation protein [Coccidioides posadasii str.
Silveira]
Length = 765
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 72/238 (30%)
Query: 217 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 249
+S S F P N RG KI +PPSALE +
Sbjct: 22 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPST 81
Query: 250 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
+ YP+ F++ N K GR+ HSG+LEF A+E +V L +++++L + +
Sbjct: 82 SFVNIEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQP 141
Query: 298 EL-----------------------------VNIESVSLPVATFSKFQPQTCDFLDITNP 328
EL + I +V LP T+ + +P + D +
Sbjct: 142 ELESHPRLSDLGQGEHAAEDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DTEDW 200
Query: 329 KAVLENCL-RNFACLTSGDMIAINYN-SKIYELCVLETKP-GNAVTIIECDMNVDFAP 383
KA+LE L NF LT G+ +A++ ++++L V + +P G+A+ +++ D+ VD P
Sbjct: 201 KALLERYLGANFTTLTVGESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVDIEP 258
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 39/107 (36%)
Query: 16 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 48
+S S F P N RG KI +PPSALE +
Sbjct: 22 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPST 81
Query: 49 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
+ YP+ F++ N K GR+ HSG+LEF A+E +V L
Sbjct: 82 SFVNIEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVAL 128
>gi|303320937|ref|XP_003070463.1| hypothetical protein CPC735_061910 [Coccidioides posadasii C735
delta SOWgp]
gi|240110159|gb|EER28318.1| hypothetical protein CPC735_061910 [Coccidioides posadasii C735
delta SOWgp]
Length = 761
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 72/238 (30%)
Query: 217 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 249
+S S F P N RG KI +PPSALE +
Sbjct: 7 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPST 66
Query: 250 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEG 297
+ YP+ F++ N K GR+ HSG+LEF A+E +V L +++++L + +
Sbjct: 67 SFVNIEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQP 126
Query: 298 EL-----------------------------VNIESVSLPVATFSKFQPQTCDFLDITNP 328
EL + I +V LP T+ + +P + D +
Sbjct: 127 ELESHPRLSDLGQGEHAAEDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DTEDW 185
Query: 329 KAVLENCL-RNFACLTSGDMIAINYN-SKIYELCVLETKP-GNAVTIIECDMNVDFAP 383
KA+LE L NF LT G+ +A++ ++++L V + +P G+A+ +++ D+ VD P
Sbjct: 186 KALLERYLGANFTTLTVGESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVDIEP 243
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 39/107 (36%)
Query: 16 FSVSMF--PGNEREDVERGGKIIMPPSALEQLTRL------------------------- 48
+S S F P N RG KI +PPSALE +
Sbjct: 7 WSASYFVAPPNRSPKKLRGDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPST 66
Query: 49 ------------NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
+ YP+ F++ N K GR+ HSG+LEF A+E +V L
Sbjct: 67 SFVNIEGRNQGRELPYPLTFRIVNPKNGRVIHSGILEFSAEENEVAL 113
>gi|124506413|ref|XP_001351804.1| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
gi|23504830|emb|CAD51611.1| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
Length = 700
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 26/184 (14%)
Query: 216 CFSVSMFPGNEREDV--ERGGKIIMPPSALEQLTRLN----ICYPMLFKLTNQKMGRITH 269
C P N++ D + KII+P S L+ L + N + +P F + N + ITH
Sbjct: 63 CQKFLTLPLNKKSDKLKDHSDKIILPVSILKTLEKGNYKNEVEFPYTFSIKNVQNNYITH 122
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFL------ 323
+ VLEF ++EG +++ + NL L++ + +I V + SK CDF+
Sbjct: 123 ACVLEFSSNEGIIFVSDNIKENLGLNKPQNSSIARVLITYCILSK-----CDFIKLDSLN 177
Query: 324 ----DITNPKAVLENCLR-NFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMN 378
DI K +LEN L N++ LT GD I IN+ + E +P NAV++I D+N
Sbjct: 178 NNINDIKYMKNLLENELSLNYSTLTLGDYIHINH----LNFYISELEPDNAVSLINTDIN 233
Query: 379 VDFA 382
VD
Sbjct: 234 VDIC 237
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 15 CFSVSMFPGNEREDV--ERGGKIIMPPSALEQLTRLN----ICYPMLFKLTNQKMGRITH 68
C P N++ D + KII+P S L+ L + N + +P F + N + ITH
Sbjct: 63 CQKFLTLPLNKKSDKLKDHSDKIILPVSILKTLEKGNYKNEVEFPYTFSIKNVQNNYITH 122
Query: 69 SGVLEFVADEGKVYLP 84
+ VLEF ++EG +++
Sbjct: 123 ACVLEFSSNEGIIFVS 138
>gi|300120669|emb|CBK20223.2| unnamed protein product [Blastocystis hominis]
Length = 198
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 227 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 286
R + G +I+ +++ L R + PM F++T +K T+ V EF A+ G ++P
Sbjct: 29 RAKNDNGDHVILSSYSMDLLFRKTVQNPMKFRITTEKYT--TYCSVEEFTANTGTCFMPQ 86
Query: 287 W----------MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
W MM +L L G + IE++S+P + + L + + KA E L
Sbjct: 87 WVFLLNCNDSQMMNDLDLKIGSYIRIENISIPKGKSVAVRICNEELLSVPDIKATFEEQL 146
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
R+F L G + I +N++ Y + ++ +P + I ++ +DF P
Sbjct: 147 RHFVVLAEGGHVPIKFNNQQYFIDIVHCEPEPVIDINNTNLVIDFVP 193
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 26 REDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPY 85
R + G +I+ +++ L R + PM F++T +K T+ V EF A+ G ++P
Sbjct: 29 RAKNDNGDHVILSSYSMDLLFRKTVQNPMKFRITTEKYT--TYCSVEEFTANTGTCFMPQ 86
Query: 86 WCF 88
W F
Sbjct: 87 WVF 89
>gi|328769881|gb|EGF79924.1| hypothetical protein BATDEDRAFT_25437 [Batrachochytrium
dendrobatidis JAM81]
Length = 486
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 218 SVSMFPGNEREDVERGGKIIMPPSALEQLTRLN--ICYPMLF--KLTNQKMGRITHSGVL 273
++SM G+ G +I +PPS L L + P+ F + + TH V
Sbjct: 13 TLSMLVGSTLS----GDRIQLPPSILSALYSYSDVSLSPLTFMIQFVSDTATNTTHGCVR 68
Query: 274 EFVADEGKVYLPYWMMRNLLLDEG------ELVNIESVSLPVATFSKFQPQTCDFLDITN 327
EF A EG V + ++ + LL L+N+ VSLP F+ P +L I +
Sbjct: 69 EFTAPEGSVIVSPFLAKQLLKSASADSPTDHLLNLTLVSLPKCHFAHLAPLDDTYLQIPD 128
Query: 328 PKAVLENCLR-NFACLTSGDMIAINYNS--KIYELCVLETKPGNAVTIIECDMNVDFAPP 384
K +LE+ LR N + LT G+ ++I +S ++++ ++E KP +A I+ DM V+ P
Sbjct: 129 IKYILESHLRQNHSTLTCGETLSITQHSPLRLFQFLIVELKPASACLCIDTDMEVNIHPV 188
Query: 385 VGYTEPEKVKEKEEDNMIDPVDLM 408
+ VK K + +P D++
Sbjct: 189 DPILAEKAVKNKILGQVAEPDDII 212
>gi|384246973|gb|EIE20461.1| hypothetical protein COCSUDRAFT_43901 [Coccomyxa subellipsoidea
C-169]
Length = 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 236 IIMPPSALEQLTRLNICY--PMLFKLTNQKMGRITHSG-----------------VLEFV 276
+++P S + L R + LF++ + G TH+G VL F
Sbjct: 63 VLLPASVGDDLMRQDAPKNGAQLFEIASSS-GNTTHAGASLCRLMLELQPKRPLCVLAFT 121
Query: 277 ADEGKVYLPYWMMRNLLLD------EGELVNIESVSLPVATFSKFQPQTCDFLDIT--NP 328
A EG + +P + RN D EG V++ LP + +FQP + DF +
Sbjct: 122 AAEGTIGMPPQVARNAFGDGASVSPEGATVDVLYRRLPKGEYVRFQPWSADFQREVGGDV 181
Query: 329 KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
+AVLE L + L+ GD I++ + ++L V + +PG AV++I+ +M + P +
Sbjct: 182 RAVLEAALERHSTLSEGDWISVPFAGTAFDLTVQKLRPGRAVSVIDTEMEAEVEPSL 238
>gi|298707664|emb|CBJ25981.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 228 EDVERGGKIIMPPSALEQLTRLNICYPMLF--KLTNQK------------------MGRI 267
E ++ G KI MP S L +L R P F KL +K GR
Sbjct: 103 EHLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPRAALTGRA 162
Query: 268 -------THSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTC 320
+L+ + E V++P WMM+ L L ++V L A+ QP +
Sbjct: 163 EMPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSS 222
Query: 321 DFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET-----KPGNAVTIIEC 375
FL ++N +AV+E LR+++ +T G +A Y +Y+ VLE K AV + +
Sbjct: 223 AFLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDS 282
Query: 376 DMNVDFAP----PVGYTEP-EKVKEKEEDN 400
D+ DF P G +P K K +E +
Sbjct: 283 DVATDFQAALDTPAGRRKPGAKAKSPDEGS 312
>gi|242794399|ref|XP_002482364.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718952|gb|EED18372.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 18/147 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL----------VNI 302
+P+ F+L N + GR+ ++G+ EF A+EG V L +++ L LD G+L V +
Sbjct: 616 HPLTFRLVNPRNGRVVYAGIREFSAEEGHVCLSKFLLHALELD-GQLEKDEKEEEVTVTV 674
Query: 303 ESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKIYELC 360
+ LP T+ + +P + D + KA+LE LR NF LT G+++ + + + +E
Sbjct: 675 HAQQLPKGTYVRLRPLEAGY-DPEDWKALLERHLRENFTTLTVGELLTVPSGRGRFFEFL 733
Query: 361 VLETKP----GNAVTIIECDMNVDFAP 383
+ + P G+ + I++ D+ VD P
Sbjct: 734 IDKVAPEEGGGSGICIVDTDLEVDIEP 760
>gi|302668303|ref|XP_003025724.1| hypothetical protein TRV_00095 [Trichophyton verrucosum HKI 0517]
gi|291189850|gb|EFE45113.1| hypothetical protein TRV_00095 [Trichophyton verrucosum HKI 0517]
Length = 761
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------- 299
+P+ F+L N GR+ HSG+ EF AD+ +V L ++ +L +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHSFDVELDATQRDPLP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + N S+
Sbjct: 134 TITVHAAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+ + E +P GNA+ I++ D+ VD P
Sbjct: 193 MQFLIDEVQPEGNAICIVDTDLEVDIEP 220
>gi|156097334|ref|XP_001614700.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803574|gb|EDL44973.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 295
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
VL+F A + ++LP W+M++L LD ++V I V L A+ QP +F +++ PK
Sbjct: 173 NVLDFKAKKNFIFLPAWIMQSLQLDCFDVVRIRFVKLETASSVVLQPHHKNFFNLSEPKK 232
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-----AVTIIECDMNVDFA 382
LE LR ++CLT I IN++ Y V+ G +I + D+ DF
Sbjct: 233 TLEEKLRYYSCLTKNGTICINHDGSDYHFDVIRMDAGKKKDVEVASIQDADVIFDFV 289
>gi|326484692|gb|EGE08702.1| ubiquitin fusion degradation protein 1 [Trichophyton equinum CBS
127.97]
Length = 762
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------- 299
+P+ F+L N GR+ HSG+ EF AD+ +V L ++ +L +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHNFDVEPDATQTDTLP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + N S+
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+L + + +P GNA+ I++ D+ VD P
Sbjct: 193 MQLLIDKVQPEGNAICIVDTDLEVDIEP 220
>gi|326475028|gb|EGD99037.1| ubiquitin fusion degradation protein [Trichophyton tonsurans CBS
112818]
Length = 762
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------- 299
+P+ F+L N GR+ HSG+ EF AD+ +V L ++ +L +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHNFDVEPDATQTDTLP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + N S+
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+L + + +P GNA+ I++ D+ VD P
Sbjct: 193 MQLLIDKVQPEGNAICIVDTDLEVDIEP 220
>gi|320166190|gb|EFW43089.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 871
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 232 RGGKIIMPPSALEQL---------TR----LNICYPMLFKLT-------NQKMG---RIT 268
RG ++ +P SA+EQL TR L P +L Q G ++
Sbjct: 86 RGDRVRLPQSAMEQLAASGQLGTRTRPLMLLAAATPRALQLALADKKQDTQATGGSNKVV 145
Query: 269 HSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP 328
GVL+F AD G+ LP WM + L L G+ ++ LP A + Q F + +
Sbjct: 146 ACGVLDFGADNGQADLPRWMEQALQLQHGDSISFVVAELPRAESCEIQACDLAFYRLQDQ 205
Query: 329 KAVLENCL-RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPV 385
+A LE+ L LT G+ I + Y +++ L V++ P + +++ D+ V P
Sbjct: 206 RAALESALMTQCTTLTKGERIRVEYEGRLHTLFVVDLLPADRCCVVDTDVEVKILRPA 263
>gi|302507672|ref|XP_003015797.1| hypothetical protein ARB_06109 [Arthroderma benhamiae CBS 112371]
gi|291179365|gb|EFE35152.1| hypothetical protein ARB_06109 [Arthroderma benhamiae CBS 112371]
Length = 761
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------- 299
+P+ F+L N GR+ HSG+ EF AD+ +V L ++ +L +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHSFDVELDATQTDALP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + N S+
Sbjct: 134 TITVHAAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+ + + +P GNA+ I++ D+ VD P
Sbjct: 193 MQFLIDKVQPEGNAICIVDTDLEVDIEP 220
>gi|156095350|ref|XP_001613710.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802584|gb|EDL43983.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 685
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 232 RGGKIIMPPSALEQLT----RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
K+I+P S L+ L R + +P F L N + ITH VLEF ++EG +++
Sbjct: 80 HSDKVILPVSILKTLEKGFYRSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 288 MMRNLLLDEGELVN---IESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
+ NL + + + + ++P F KF+ + +I K +L+N L N++ LT
Sbjct: 140 VKENLGIKQSSGIVRLLVTYANIPKCDFIKFESLNENTSNIKFMKNLLQNELSLNYSTLT 199
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMID 403
GD + IN N Y + E +P NAV++I D+ VD E + V EK +D+
Sbjct: 200 LGDYVHIN-NLSFY---ISELEPDNAVSLINTDITVDIC------ERKNVGEKRDDSSNR 249
Query: 404 PVDLMPEPSGFVAFHGTGNRLDGKRKKK 431
D EP +GN G +K K
Sbjct: 250 LSDFY-EPINTTDVTVSGNIKKGMKKYK 276
>gi|440290960|gb|ELP84259.1| ubiquitin fusion degradation protein, putative [Entamoeba invadens
IP1]
Length = 462
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 216 CFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICY--PMLFKLTNQKMGRITHSGVL 273
C+S + G + + +++ PP ++++ N + P++F++ N K R GV
Sbjct: 16 CYSFAFLAG--KIPPQPTDRVVFPPYVMDKVFNQNPEFKSPIMFEIQNTKTKRRLVCGVD 73
Query: 274 EFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLE 333
F + + Y+P WMM L + G+ +P+ F+P F I NPK LE
Sbjct: 74 NFDSPDF-TYMPQWMMDYLKFNPGDRAIAIKTWVPLGKSVTFKPLQATFYTIENPKQTLE 132
Query: 334 NCLRNFACLTSGDMIAINYNSKI--------YELCVLETKPGNAVTIIECDMNVDFA--P 383
LRN+ LT+ I N+K+ + + + +P V I + D+NV+F P
Sbjct: 133 ALLRNYVTLTANTTITFQMNTKVDGLTLATDVSVLITDLQPLTTVLIRDTDLNVEFEENP 192
Query: 384 PVG--YTEPEKVKEK---------------------EEDNMIDPVDLMPEPSGFVAFHGT 420
+ Y +P+ + E +DP + E + F F
Sbjct: 193 EIAPKYDKPKPPTKMEDDDSEDEDDDDETGNSKMVFENPQKVDPKVKLTESTEFKPFECD 252
Query: 421 GNRLDGKRKKKDTVETGGTPTKR 443
G RL + +ET +P +
Sbjct: 253 GKRLGMSKDMGKKMETESSPNTK 275
>gi|408395197|gb|EKJ74382.1| hypothetical protein FPSE_05453 [Fusarium pseudograminearum CS3096]
Length = 742
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 54/200 (27%)
Query: 232 RGGKIIMPPSALEQL------------------------TRLNICYPMLFKLTNQKMGRI 267
RG KI++P SALEQL + + P++F+L N K
Sbjct: 27 RGDKILLPQSALEQLLAAARSLPSTTTRSDPWSAHSDVDSAQQLPNPLIFRLVNPKNKNA 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGEL--------------------VNIESVSL 307
+G+ EF A EG + L W+ L + E E + +E+ L
Sbjct: 87 VFAGIREFSATEGTMGLSPWLTEALGIQENEYASLKEVIDLEQDPAQLDGIQIKVEARQL 146
Query: 308 PVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVL 362
P T+ +F+P + NP KA+LE LR NF L+ G MIA+ + + ++L V
Sbjct: 147 PKGTYVRFRPLEAGY----NPDDWKALLERQLRENFTTLSKGSMIAVKGAHGEEFKLLVD 202
Query: 363 ETKP-GNAVTIIECDMNVDF 381
+ P G+ + +++ D+ VD
Sbjct: 203 KVAPEGDGICVVDTDLEVDI 222
>gi|296413578|ref|XP_002836487.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630312|emb|CAZ80678.1| unnamed protein product [Tuber melanosporum]
Length = 753
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 63/240 (26%)
Query: 219 VSMFPGNEREDVERGGKIIMPPSALEQLT----------------------RLNICY--- 253
+S+ P +E G KI++P SALEQL +++I +
Sbjct: 12 LSVLPSSEISSSLVGDKILLPQSALEQLLAAVSSTQSGSQPTPALTDTHPPQVDISWASA 71
Query: 254 ------------PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD------ 295
P++F+L N + R +H+ LEF A+EGK+ + + L +D
Sbjct: 72 ARHERPQPQLPHPLMFRLFNPRNNRFSHAAPLEFSAEEGKIGISPLLRDALGIDEDVEMK 131
Query: 296 ---EGELVNIES-------VSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTS 344
EGELV E LP T+ + +P + D + KA+LE LR NF LT
Sbjct: 132 GAGEGELVEDEEKRITVVWKDLPRGTYVRLRPLEAGY-DEEDWKALLERYLRVNFTTLTV 190
Query: 345 GDMIAINYNSKI--------YELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEK 396
G+++AI + + + KP AV I++ D+ VD P E +K++
Sbjct: 191 GEILAIGGRTLAIGGKEKAEFRFLIDAMKPEEAVCIVDTDLEVDIEPLSEEQARETLKQR 250
>gi|221054596|ref|XP_002258437.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808506|emb|CAQ39209.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 297
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 263 KMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDF 322
K+ R+ VL+F A + ++LP W+M++L LD ++V + L A+ QP +F
Sbjct: 168 KLDRV-FINVLDFKAKKNFIFLPTWIMQSLQLDCFDVVRLRFTKLETASSVVLQPHHKNF 226
Query: 323 LDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-----AVTIIECDM 377
++++PK LE LR ++CLT I+I ++ Y V++ G +I + D+
Sbjct: 227 FNLSDPKKTLEEKLRYYSCLTKNSTISIKHDDSEYHFDVIKMDAGKKKDVEVASIQDADV 286
Query: 378 NVDFA 382
DF
Sbjct: 287 IFDFV 291
>gi|345563376|gb|EGX46377.1| hypothetical protein AOL_s00109g135 [Arthrobotrys oligospora ATCC
24927]
Length = 749
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 248 RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL------------- 294
R + +P+ F++TN GR+ ++G+ EF A+EG+V L ++ L L
Sbjct: 88 RQQLPHPLTFRVTNLITGRVAYAGIREFSAEEGQVVLSNFLREGLALLNLGQQEQQEQHG 147
Query: 295 DEGEL---VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL-RNFACLTSGDMIAI 350
D+G L + +E+V++P TF++ +P + + P +LEN L +NF L +++AI
Sbjct: 148 DDGLLEAGIKVEAVNVPKGTFARLRPLDAGYEEDWKP--ILENHLQKNFTTLALNNILAI 205
Query: 351 ----NYNSKIYELCVLETKP--GNAVTIIECDMNVDFAPPVGYTEPEKVKEKE 397
+ K ++ + + KP A+ I++ D+ VD P E ++++E
Sbjct: 206 PRLSHQPGKDFKFLIDQLKPEGTEAICIVDTDLEVDIEPLNEEQAKESLRQRE 258
>gi|315041507|ref|XP_003170130.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
gi|311345164|gb|EFR04367.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
Length = 760
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------- 299
+P+ F+L N GR+ HSG+ EF ADE +V L ++ +L +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADENEVSLSPFLRESLGIEDSSFDIEPDSTQTETQP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + + S+
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVTASRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+ V + +P G A+ I++ D+ VD P
Sbjct: 193 MQFLVDKVQPDGKAICIVDTDLEVDIEP 220
>gi|209882805|ref|XP_002142838.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558444|gb|EEA08489.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 660
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 27/215 (12%)
Query: 234 GKIIMPPSALEQLTRLNI--CYPMLFKLTNQKMGR-------ITHSGVLEFVADEGKVYL 284
++ +P L L+ N YP+LFKL R ITH VL+F + GK+ L
Sbjct: 85 DRVSLPIEILSSLSNDNDDNSYPLLFKLEVINNDRCESDESSITHCSVLDFSSSSGKIGL 144
Query: 285 PYWMMR-----NLLLDEGELVNIESVSLPVATFSKFQ-PQTCD-FLDITNPKAVLENCLR 337
P ++R N LD L+ IE V L A+++ F+ Q D L++ N K +LE+ LR
Sbjct: 145 PNKVLRCLKINNTSLDNCLLIRIEYVRLCKASYALFELVQNYDRILNLPNIKPLLESYLR 204
Query: 338 N-FACLTSGDMIAI-NYNSKIYE--LCVLETK---PGNAVTIIECDMNVDFAPPVGYTEP 390
+ F+ LT D + I + +SK+ + L +++ K P +A II D+ +D ++
Sbjct: 205 DYFSTLTKNDTLIIYSLHSKLRQEPLAIVKVKQIEPEDATCIINTDLAIDLIT----SDI 260
Query: 391 EKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLD 425
+ E E++N I+ D++ S + F ++L+
Sbjct: 261 NTLNENEDNNGINKDDIILNISDVLKFQFKESKLN 295
>gi|389583003|dbj|GAB65739.1| hypothetical protein PCYB_072410, partial [Plasmodium cynomolgi
strain B]
Length = 278
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
VL+F A + ++LP W+M++L L+ ++V I V L A+ QP F +++ PK
Sbjct: 156 NVLDFKAKKNFIFLPTWIMQSLQLECFDVVRIRFVKLETASSVVLQPHHKKFFNLSEPKK 215
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN-----AVTIIECDMNVDFA 382
LE LR ++CLT I IN++ Y V++ G +I + D+ DF
Sbjct: 216 TLEEKLRYYSCLTKHGTICINHDGVDYYFDVIKMDAGKKKDVEVASIQDADVIFDFV 272
>gi|70952282|ref|XP_745320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525605|emb|CAH79201.1| hypothetical protein PC105816.00.0 [Plasmodium chabaudi chabaudi]
Length = 98
Score = 65.1 bits (157), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 237 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM 288
I+P +AL L R +I +PMLF+++N + THSGVLEF++DEG ++PYW+
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWV 92
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 36 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 86
I+P +AL L R +I +PMLF+++N + THSGVLEF++DEG ++PYW
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYW 91
Score = 43.1 bits (100), Expect = 0.34, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 108 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
I+P +AL L R +I +PMLF+++N + THSGVLE
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEF 79
>gi|327298339|ref|XP_003233863.1| ubiquitin fusion degradation protein [Trichophyton rubrum CBS
118892]
gi|326464041|gb|EGD89494.1| ubiquitin fusion degradation protein [Trichophyton rubrum CBS
118892]
Length = 761
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------------GEL- 299
+P+ F+L N GR+ HSG+ EF A++ +V L ++ +L +++ G L
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSANDNEVSLSSFLRESLGIEDYSFDVEPDATQTGTLP 133
Query: 300 -VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYN-SKI 356
+ + LP ++ + +P + D+ + KA+LE LR N+ L+ G+++ + N S+
Sbjct: 134 AITVHITQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAP 383
+ + + +P GNA+ I++ D+ VD P
Sbjct: 193 MQFLIDKVQPEGNAICIVDTDLEVDIEP 220
>gi|83273514|ref|XP_729432.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23487210|gb|EAA20997.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 98
Score = 64.7 bits (156), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 237 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM 288
I+P +AL L R +I +PMLF+++N + THSGVLEF++DEG ++PYW+
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWV 92
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 36 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSM 92
I+P +AL L R +I +PMLF+++N + THSGVLEF++DEG ++PYW +++
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWVKEINI 97
Score = 42.7 bits (99), Expect = 0.36, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 108 IMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEL 146
I+P +AL L R +I +PMLF+++N + THSGVLE
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEF 79
>gi|296005209|ref|XP_002808936.1| apicoplast Ufd1 precursor [Plasmodium falciparum 3D7]
gi|225631822|emb|CAX64217.1| apicoplast Ufd1 precursor [Plasmodium falciparum 3D7]
Length = 296
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
VL+F A + ++LP W+M++L L+ +++ + V L A+ QP F D+ NPK
Sbjct: 174 NVLDFKAKKNFIFLPTWVMKSLNLNCFDVIRLRFVKLETASSVVLQPHEKKFFDLENPKK 233
Query: 331 VLENCLRNFACLTSGDMIAINYNSKIYELCVL-----ETKPGNAVTIIECDMNVDFA 382
+LE LR ++C+T I+I ++ +Y V+ + K +I + D+ DF
Sbjct: 234 ILEEKLRYYSCITRNSTISIKHDDVVYYFDVIRIDSEKKKDTEVASIQDADVIFDFV 290
>gi|167390007|ref|XP_001739169.1| ubiquitin fusion degRadation protein [Entamoeba dispar SAW760]
gi|165897218|gb|EDR24444.1| ubiquitin fusion degRadation protein, putative [Entamoeba dispar
SAW760]
Length = 447
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 31/236 (13%)
Query: 235 KIIMPPSALEQLTRLNICY--PMLF--KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMR 290
K++ P L++LT+ N + P+LF K +QK + GV F + + Y P W++
Sbjct: 34 KVVFPSYVLDELTKQNPDFQAPILFEVKSKSQKFTKRIVCGVESFSSPDF-TYFPQWILD 92
Query: 291 NLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAI 350
L L G+ + VS+P F+P F + +PK LE LRN+ LT I
Sbjct: 93 YLHLQPGDAATVLKVSIPKGKSVTFKPLQNTFYSVEDPKKTLEAILRNYMTLTLNTTITF 152
Query: 351 NYNSKI--------YELCVLETKPGNAVTIIECDMNVDFA--PPVG--YTEPEKVKEKEE 398
N+ + + + E +P ++ I E ++ V+F P + Y +P+ ++E++
Sbjct: 153 QMNTVLDGMNIATDVSVLISEVQPFTSIYIRETELIVEFEENPEISPKYNKPQPMEEEKS 212
Query: 399 DNMID-----------PVD-LMPEPSGFVAFHGTGNRLDGKR--KKKDTVETGGTP 440
+ D PV+ M + S F F G G+RL R ++ D +T P
Sbjct: 213 EEEEDIDFKFTSVIQQPVEQQMADSSDFKPFEGEGSRLGRSRDMEQNDYTDTELCP 268
>gi|46127503|ref|XP_388305.1| hypothetical protein FG08129.1 [Gibberella zeae PH-1]
Length = 741
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 54/200 (27%)
Query: 232 RGGKIIMPPSALEQL-----------TRLN-------------ICYPMLFKLTNQKMGRI 267
RG KI++P SALEQL TR + + P++F+L N K
Sbjct: 27 RGDKILLPQSALEQLLAAARSLPSTTTRSDPWSAHSDVDSAQQLPNPLIFRLVNPKNKNA 86
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLLLDEGEL--------------------VNIESVSL 307
+G+ EF A EG + L W+ L + E E + +E+ L
Sbjct: 87 VFAGIREFSATEGTMGLSPWLTEALGIQENEYASLKEVVDLEQDPAQLDGIQIKVEARQL 146
Query: 308 PVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVL 362
P T+ +F+P + NP KA+LE LR +F L+ G MIA+ + + ++L V
Sbjct: 147 PKGTYVRFRPLEAGY----NPDDWKALLERQLREDFTTLSKGAMIAVKGAHGEEFKLLVD 202
Query: 363 ETKP-GNAVTIIECDMNVDF 381
+ P G+ + +++ D+ VD
Sbjct: 203 KVAPEGDGICVVDTDLEVDI 222
>gi|428673378|gb|EKX74291.1| signal peptide containing protein [Babesia equi]
Length = 300
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKF 315
F N RI+ +F A + +++P WMM++L + +++ + + L AT+ K
Sbjct: 167 FFSARNSHNERIS-CASFDFRAQDNFIFIPKWMMKSLNIRPYDIIYLSHIQLLDATYVKI 225
Query: 316 QPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLET---KPGN--AV 370
P +F D+ PK +LE L++++ LT G +I I++ +++Y L V+ K N
Sbjct: 226 MPMEKEFFDLKEPKLILEQHLKHYSTLTRGAIIPISHKNRLYNLKVVSINTEKKQNIECA 285
Query: 371 TIIECDMNVDFAPPV 385
+I + D+ VD +
Sbjct: 286 SIQDIDVAVDLVRAI 300
>gi|397617189|gb|EJK64321.1| hypothetical protein THAOC_14958 [Thalassiosira oceanica]
Length = 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIE-SVSLPVATFSKFQPQTCDFLDITNPK 329
G+L+ + +LP WM R+L L ++V++ + P + + +P T FL I N +
Sbjct: 230 GLLDCRSPSNYAFLPRWMFRSLGLRPYDVVDVRLATKTPPGSAVRLRPHTSAFLSINNHQ 289
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG------NAVTIIECDMNVDFAP 383
AVLE L++++ LT G I +Y + Y V++ + + +CD+ +F
Sbjct: 290 AVLETELKHYSALTLGTTIPFDYRGERYYFDVVDLRAAPRGERVPTAKVTDCDIATEFVR 349
Query: 384 PVGYTEPEKVKEKEE 398
+P K + +++
Sbjct: 350 ARDQLKPRKKRPRDD 364
>gi|156087372|ref|XP_001611093.1| ubiquitin fusion degradation protein UFD1 [Babesia bovis T2Bo]
gi|154798346|gb|EDO07525.1| ubiquitin fusion degradation protein UFD1, putative [Babesia bovis]
Length = 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 33/183 (18%)
Query: 233 GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGV-------------------- 272
K +P S L QLT NI P F + ++ +S V
Sbjct: 113 SDKASLPESILTQLTDRNISIPWHFLIQKVHRPQVVNSPVESESSLPSSKADFFDKADGH 172
Query: 273 --------LEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLD 324
+F E +YLP WMM ++ L + V + + L A F P F
Sbjct: 173 KERVACSSWDFRPQESYIYLPRWMMESMDLRPYDTVYVTQLKLQDAIFVSISPVESSFFA 232
Query: 325 ITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCV--LET---KPGNAVTIIECDMNV 379
++ PKAVLE L+ ++ LT G I I + Y L V +ET K +I + D+++
Sbjct: 233 LSAPKAVLEEHLKQYSSLTRGTTIQITHEGITYHLRVNRIETEHCKDAECASIQDTDVSI 292
Query: 380 DFA 382
D
Sbjct: 293 DLV 295
>gi|344299558|gb|EGW29911.1| hypothetical protein SPAPADRAFT_73362 [Spathaspora passalidarum
NRRL Y-27907]
Length = 711
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 217 FSVSMFPGNEREDVERGGKIIMPPSALEQLTRL----NICYPMLFKLTNQKM--GRITHS 270
F +S+ N+R K I+PPS L Q+ + N+ +P++F++TN G+ +
Sbjct: 5 FYLSVDQSNDRSLNPYSDKAILPPSVLSQIVEVIPESNLPHPLIFRITNTNAPSGKPVYI 64
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESV-SLPVATFSKFQPQTCDFLDITNPK 329
GV EF A E + LP + R L E V I V ++P AT K +P + +ITN K
Sbjct: 65 GVKEFTAVEDAI-LPDVIYRKL--GSPEQVEITLVQNIPKATSIKLRPDQF-YANITNWK 120
Query: 330 AVLENCLR-NFACLTSGDMIAINYNSKIYELCVLETKPGNAVT--IIECDMNVDFAP 383
LEN L + LTSGD++ I + YEL + E G T I++ D+ ++ P
Sbjct: 121 FFLENKLNLYYTTLTSGDIMIIQDENLRYELHIDEINGGANTTACIVDTDITLEMVP 177
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 16 FSVSMFPGNEREDVERGGKIIMPPSALEQLTRL----NICYPMLFKLTNQKM--GRITHS 69
F +S+ N+R K I+PPS L Q+ + N+ +P++F++TN G+ +
Sbjct: 5 FYLSVDQSNDRSLNPYSDKAILPPSVLSQIVEVIPESNLPHPLIFRITNTNAPSGKPVYI 64
Query: 70 GVLEFVADEGKV 81
GV EF A E +
Sbjct: 65 GVKEFTAVEDAI 76
>gi|223999983|ref|XP_002289664.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974872|gb|EED93201.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 321
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIE-SVSLPVATFSKFQPQTCDFLDITNPK 329
G L+F + + +LP WM + L L ++V+I+ + + P + + +P T F++I N +
Sbjct: 188 GALDFRSPDNYAFLPPWMFKALGLRPRDVVDIKLTTTTPPGSAVRLRPHTSSFVNIGNHQ 247
Query: 330 AVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPG------NAVTIIECDMNVDFAP 383
AVLE L++++ LT G I +Y + Y V++ + + +CD+ +F
Sbjct: 248 AVLETELKHYSALTLGSTIPFDYRGERYYFDVVDLRSAPRGERVPMAKVQDCDIAAEFVR 307
Query: 384 PVGYTEPEK 392
P +P+K
Sbjct: 308 PKDQLKPKK 316
>gi|67465920|ref|XP_649118.1| ubiquitin fusion degradation protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465483|gb|EAL43735.1| ubiquitin fusion degradation protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449705234|gb|EMD45325.1| ubiquitin fusion degradation protein, putative [Entamoeba
histolytica KU27]
Length = 447
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 31/236 (13%)
Query: 235 KIIMPPSALEQLTRLNICY--PMLFKLTN--QKMGRITHSGVLEFVADEGKVYLPYWMMR 290
K++ P L++LT+ N + P+LF+++N Q + GV F + + Y P W++
Sbjct: 34 KVVFPAYVLDELTKQNPDFQAPILFEVSNKSQTFKKRIVCGVESFSSPDF-TYFPQWILD 92
Query: 291 NLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAI 350
L + G++ I V +P F+P F +I +PK LE+ LRN+ LT I
Sbjct: 93 YLHIQPGDVATIFKVLIPKGKSVTFKPLQSTFYNIEDPKKTLESILRNYMTLTLNTTITF 152
Query: 351 NYNSKI--------YELCVLETKPGNAVTIIECDMNVDFAPPV----GYTEPEKVKEKEE 398
N+ I + + + +P +++ I E ++ V+F + Y +P+ ++E++
Sbjct: 153 QMNTIIDGMNIATDVSVLISDVQPFSSIYIRETELVVEFEENLEISPKYNKPQPIEEEKS 212
Query: 399 DN-----------MIDPVDL-MPEPSGFVAFHGTGNRLDGKR--KKKDTVETGGTP 440
+ + PV+ M + S F F G G+RL R ++ D +T P
Sbjct: 213 EEDEDIDFKFTPVIQQPVEQHMADSSDFKPFEGEGSRLGRSRDMEQNDYTDTELCP 268
>gi|50551001|ref|XP_502974.1| YALI0D18194p [Yarrowia lipolytica]
gi|49648842|emb|CAG81166.1| YALI0D18194p [Yarrowia lipolytica CLIB122]
Length = 616
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 235 KIIMPPSALEQLTRL---NICYPMLFKLT-----NQKMGRITHSGVLEFVADEGKVYLPY 286
KI +P L+ L + P+LF + N + +T GV EF A+ G V +P
Sbjct: 15 KITLPADVLDSLVAEFGDELPRPLLFTIKARDPKNPRDSHLTTVGVKEFTAESGTVGVPQ 74
Query: 287 WMMRNLLLDEGELVNIE-SVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTS 344
++ N+ + G ++++ S +P+AT +P+ D + N +A+LE LR ++ LT
Sbjct: 75 IVLENIRTETGAILDVTVSRDIPLATDMTLKPR--DQYQVDNYEALLEAALRASYTALTV 132
Query: 345 GDMIAI---NYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVG 386
G I I + S+ E V P + V I++ D+N+D PVG
Sbjct: 133 GQNIVIRNPSDASRDLEFVVESLSPASTVCIVDTDVNLDVLVPVG 177
>gi|254565167|ref|XP_002489694.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|238029490|emb|CAY67413.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|328350113|emb|CCA36513.1| Zinc finger protein 347 [Komagataella pastoris CBS 7435]
Length = 677
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 230 VERGGKIIMPPSALEQLT----RLNIC---YPMLFKLTNQKMGRITHS--GVLEFVADEG 280
V+ ++ +PPS LE L RL+I +P++F+L +K +S GV EF + EG
Sbjct: 24 VKYSDRVALPPSILESLVNQQQRLSIASLPHPLIFRLQAEKSNSAVNSFVGVKEFTSQEG 83
Query: 281 KVYLPYWMMRNLLL--DEGELVNIESVS-LPVATFSKFQPQTCDFLDITNPKAVLE-NCL 336
+ LP ++ L+ + +NI S +P T +P + +I + K LE +
Sbjct: 84 TILLPEFIYDKLVSPDNNDSTINITLASDIPKGTSIALKPLEL-YPEIKDWKYFLEAKLI 142
Query: 337 RNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
+++ L++ D + I+ K+Y+L V + +P +A+ +I+ D+++ P
Sbjct: 143 KSYTTLSTNDTVCISEKDKVYKLLVEQAEPTSAICLIDTDIDLSIVP 189
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 29 VERGGKIIMPPSALEQLT----RLNIC---YPMLFKLTNQKMGRITHS--GVLEFVADEG 79
V+ ++ +PPS LE L RL+I +P++F+L +K +S GV EF + EG
Sbjct: 24 VKYSDRVALPPSILESLVNQQQRLSIASLPHPLIFRLQAEKSNSAVNSFVGVKEFTSQEG 83
Query: 80 KVYLPYWCFSVSMFPGNE--------REDVERGGKIIMPPSAL 114
+ LP + + + P N D+ +G I + P L
Sbjct: 84 TILLPEFIYDKLVSPDNNDSTINITLASDIPKGTSIALKPLEL 126
>gi|402079440|gb|EJT74705.1| hypothetical protein GGTG_08543 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 800
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 233 GGKIIMPPSALEQL-------------TRL--------NICYPMLFKLTNQKMGRITHSG 271
G KI +P SAL+QL TR ++ YP++F+L N+ G+ H+G
Sbjct: 62 GDKINLPSSALQQLLDANAATANATAPTRFPSLEQNAHSLPYPLMFRLVNETNGKAVHAG 121
Query: 272 VLEFVADEGKVYLPYWMMRNLLLDEGE------LVNIESVSLPVATFSKFQP-QTCDFLD 324
V EF A+EG V L +++ +L L+ G V + + LP + P Q D
Sbjct: 122 VREFSAEEGHVVLSPFLLASLGLESGSDAESLPRVKVTAHQLPKGHYVGLSPAQDYAAYD 181
Query: 325 ITNPKAVLENCLRN-FACLTSGDMIAINYNSK-IYELCVLETKP-GNAVTIIECDMNVDF 381
+ +LE LR + L+ G ++ + + YE V KP G+ + +I+ D+ +D
Sbjct: 182 PAVLEPLLERELRQGYTTLSVGTILHVRSGLRDKYEFLVESVKPEGDGICVIDTDLELDL 241
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
Query: 32 GGKIIMPPSALEQL-------------TRL--------NICYPMLFKLTNQKMGRITHSG 70
G KI +P SAL+QL TR ++ YP++F+L N+ G+ H+G
Sbjct: 62 GDKINLPSSALQQLLDANAATANATAPTRFPSLEQNAHSLPYPLMFRLVNETNGKAVHAG 121
Query: 71 VLEFVADEGKVYL-PYWCFSVSMFPGNEREDVER 103
V EF A+EG V L P+ S+ + G++ E + R
Sbjct: 122 VREFSAEEGHVVLSPFLLASLGLESGSDAESLPR 155
>gi|407041149|gb|EKE40548.1| ubiquitin fusion degradation protein, putative [Entamoeba nuttalli
P19]
Length = 447
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 235 KIIMPPSALEQLTRLNICY--PMLFKLTNQ--KMGRITHSGVLEFVADEGKVYLPYWMMR 290
K++ P L++LT+ N + P+LF+++N+ K + GV F + + Y P W++
Sbjct: 34 KVVFPAYVLDELTKQNPDFQAPILFEVSNKSPKFKKRIVCGVESFSSPDF-TYFPQWILD 92
Query: 291 NLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAI 350
L + G++ I V +P F+P F +I +PK LE+ LRN+ LT I
Sbjct: 93 YLHIQPGDVATIFKVLIPKGKSVTFKPLQSTFYNIEDPKKTLESILRNYMTLTLNTTITF 152
Query: 351 NYNSKI--------YELCVLETKPGNAVTIIECDMNVDF 381
N+ I + + + +P +++ I E ++ V+F
Sbjct: 153 QMNTIIDGMNIATDVSVLISDVQPFSSIYIRETELIVEF 191
>gi|212535932|ref|XP_002148122.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
marneffei ATCC 18224]
gi|210070521|gb|EEA24611.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
marneffei ATCC 18224]
Length = 766
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 16/146 (10%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE-------LVNIESV 305
+P+ FKL N + G++ ++G+ EF A+EG + L ++ ++L ++ V + +
Sbjct: 103 HPLTFKLVNPRNGQVVYAGIREFSAEEGHIGLSKFLRQSLGVEAEAEKEQEEVTVTVHAQ 162
Query: 306 SLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVLE 363
LP T+ + +P + D + KA+LE LR NF LT G+++ + + + +E + +
Sbjct: 163 QLPKGTYVRLRPLEAGY-DPEDWKALLERHLRENFTTLTVGELLTVPSGRGRSFEFLIDK 221
Query: 364 TKP------GNAVTIIECDMNVDFAP 383
P N + I++ D+ VD P
Sbjct: 222 VAPEGKEGQENGICIVDTDLEVDIEP 247
>gi|398408713|ref|XP_003855822.1| hypothetical protein MYCGRDRAFT_37296 [Zymoseptoria tritici IPO323]
gi|339475706|gb|EGP90798.1| hypothetical protein MYCGRDRAFT_37296 [Zymoseptoria tritici IPO323]
Length = 801
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 26/162 (16%)
Query: 245 QLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE-------- 296
Q + ++ YP+ F+L N GR+ ++G+ EF A++G+V L ++ L +++
Sbjct: 93 QDQKQSLPYPLTFRLVNPGNGRVVYAGIREFSAEDGQVGLSSFLRGALGVEDDNAEKVVV 152
Query: 297 --------GELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDM 347
G ++ I + LP TF K +P + D + KA+LE LR N+ LT+G++
Sbjct: 153 DGEEKEERGPMITIHAKQLPKGTFVKLRPLEPGY-DPDDWKALLEQHLRQNYTTLTNGEV 211
Query: 348 IAI------NYNSKIYELCVLETKP--GNAVTIIECDMNVDF 381
+ + N + + + KP +AV +++ D+ VD
Sbjct: 212 LVVPGGRASNGKKEEFRFLIDGFKPEGADAVCVVDTDLEVDI 253
>gi|389625613|ref|XP_003710460.1| hypothetical protein MGG_05584 [Magnaporthe oryzae 70-15]
gi|351649989|gb|EHA57848.1| hypothetical protein MGG_05584 [Magnaporthe oryzae 70-15]
Length = 764
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 63/211 (29%)
Query: 233 GGKIIMPPSALEQLTRLN---------------------------------------ICY 253
G KII+P SAL+QL N + Y
Sbjct: 26 GDKIILPSSALQQLLDANAAAASASAASAYSYSTPVVTRYTSPYNSFGSAPQPEQQKLPY 85
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL---------DEGEL----- 299
P++F+L N++ G+ H+GV EF A+EG+V L +++R+L L D+GE
Sbjct: 86 PLMFRLVNERNGKFVHAGVREFSAEEGQVTLSPFLLRSLGLAEQENTSTVDDGEAESGSK 145
Query: 300 ----VNIESVSLPVATFSKFQPQTCDFL--DITNPKAVLENCLRN-FACLTSGDMIAINY 352
V I + LP + P D+ D + +LE LR + L++G ++ +
Sbjct: 146 RVDNVRISAHQLPKGVYVGLAP-VHDYASYDPAILEPLLERELRQGYTTLSTGTILQVKR 204
Query: 353 N-SKIYELCVLETKP-GNAVTIIECDMNVDF 381
++ YE V KP G+ + +I+ D+ +D
Sbjct: 205 GPTEDYEFTVESVKPEGDGICVIDTDLELDL 235
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQLTRLN---------------------------------------ICY 52
G KII+P SAL+QL N + Y
Sbjct: 26 GDKIILPSSALQQLLDANAAAASASAASAYSYSTPVVTRYTSPYNSFGSAPQPEQQKLPY 85
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P++F+L N++ G+ H+GV EF A+EG+V L
Sbjct: 86 PLMFRLVNERNGKFVHAGVREFSAEEGQVTL 116
>gi|342875442|gb|EGU77209.1| hypothetical protein FOXB_12286 [Fusarium oxysporum Fo5176]
Length = 750
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 62/208 (29%)
Query: 232 RGGKIIMPPSALEQL--------------------------TRLNICYPMLFKLTNQKMG 265
RG KI++P SALEQL T + P++F+L N K
Sbjct: 27 RGDKILLPQSALEQLLAAARSRPSTTTARSDPWSYSSSDADTAQQLPNPLIFRLVNPKNK 86
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVN------------------------ 301
+G+ EF A EG + L W+ L + E E V+
Sbjct: 87 NAVFAGIREFSASEGTLGLSPWLTEALGIQEDECVSPKEVIDLEQDTAQNSERMDVDGIQ 146
Query: 302 --IESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI-NYNS 354
+E+ LP T+ + +P + NP K +LE LR NF L+ G M+A+
Sbjct: 147 IKVEARQLPKGTYVRLRPLEAGY----NPDDWKPLLERQLRENFTTLSKGSMLAVKGARG 202
Query: 355 KIYELCVLETKP-GNAVTIIECDMNVDF 381
+ ++L V + P G+ + +++ D+ VD
Sbjct: 203 EEFKLLVDKVAPEGDGICVVDTDLEVDI 230
>gi|440466732|gb|ELQ35980.1| hypothetical protein OOU_Y34scaffold00673g2 [Magnaporthe oryzae
Y34]
gi|440481810|gb|ELQ62352.1| hypothetical protein OOW_P131scaffold01081g2 [Magnaporthe oryzae
P131]
Length = 812
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 63/211 (29%)
Query: 233 GGKIIMPPSALEQLTRLN---------------------------------------ICY 253
G KII+P SAL+QL N + Y
Sbjct: 74 GDKIILPSSALQQLLDANAAAASASAASAYSYSTPVVTRYTSPYNSFGSAPQPEQQKLPY 133
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL---------DEGEL----- 299
P++F+L N++ G+ H+GV EF A+EG+V L +++R+L L D+GE
Sbjct: 134 PLMFRLVNERNGKFVHAGVREFSAEEGQVTLSPFLLRSLGLAEQENTSTVDDGEAESGSK 193
Query: 300 ----VNIESVSLPVATFSKFQPQTCDFL--DITNPKAVLENCLRN-FACLTSGDMIAINY 352
V I + LP + P D+ D + +LE LR + L++G ++ +
Sbjct: 194 RVDNVRISAHQLPKGVYVGLAP-VHDYASYDPAILEPLLERELRQGYTTLSTGTILQVKR 252
Query: 353 N-SKIYELCVLETKP-GNAVTIIECDMNVDF 381
++ YE V KP G+ + +I+ D+ +D
Sbjct: 253 GPTEDYEFTVESVKPEGDGICVIDTDLELDL 283
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQLTRLN---------------------------------------ICY 52
G KII+P SAL+QL N + Y
Sbjct: 74 GDKIILPSSALQQLLDANAAAASASAASAYSYSTPVVTRYTSPYNSFGSAPQPEQQKLPY 133
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P++F+L N++ G+ H+GV EF A+EG+V L
Sbjct: 134 PLMFRLVNERNGKFVHAGVREFSAEEGQVTL 164
>gi|358341180|dbj|GAA48923.1| ubiquitin fusion degradation protein 1 homolog [Clonorchis
sinensis]
Length = 156
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 288 MMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAV 331
M+RNLLL+EG V++ + +L ATF++FQPQ+ DFLDI+NP+AV
Sbjct: 1 MLRNLLLEEGGRVSVCNAALRTATFARFQPQSVDFLDISNPQAV 44
>gi|308801301|ref|XP_003077964.1| Ubiquitin fusion-degradation protein (ISS) [Ostreococcus tauri]
gi|116056415|emb|CAL52704.1| Ubiquitin fusion-degradation protein (ISS) [Ostreococcus tauri]
Length = 476
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 265 GRITHSGVLEFVA-DEGKVYLPYWMMRNLLL---DEGELVNIESVSLPVATFSKFQPQTC 320
GR H GVL++ G + +P M+R+L L D G V + +LP AT +P+T
Sbjct: 76 GRTCHVGVLDYGGVSTGMIGIPRPMLRSLGLRETDVGAEVRVTYAALPSATRMTLKPKTN 135
Query: 321 DFLDIT----NPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGN---AVTII 373
+F N + +LE + + T GD I + Y+L V+ +P + AV+++
Sbjct: 136 EFARACEAEENVRDILERTMMGRSAATVGDEIEVTVRDATYDLRVVRVEPDDGHGAVSLL 195
Query: 374 ECDMNVDFAPPVGYTE 389
E D+ VD P Y E
Sbjct: 196 ETDVEVDLEPSDEYDE 211
>gi|317034875|ref|XP_001400649.2| ubiquitin fusion degradation protein (Ufd1) [Aspergillus niger CBS
513.88]
Length = 745
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 62/226 (27%)
Query: 233 GGKIIMPPSALEQL------------------------------------------TRLN 250
G KII+PPSALEQL +
Sbjct: 27 GDKIILPPSALEQLLAAAPLQEVTSSGPARPYTNTFDPFNPHTFAAESQARERAVDRQQQ 86
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE------------ 298
+ +P+ F++ N + R+ ++GV EF A E ++ L ++ L +D
Sbjct: 87 LPHPLTFRIVNPQNDRVVYAGVREFSAPENEIGLSTFLRGALGIDGTRQPSPHGGDAAPT 146
Query: 299 LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKI 356
V + + LP T+ + +P + D N KA+LE LR N+ LTSG+++ + ++
Sbjct: 147 TVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSGEVLTVAGGRNQS 205
Query: 357 YELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNM 401
++ V + +P GN + +++ D+ VD V TE ++ +E E +
Sbjct: 206 FQFLVDKVEPHGNGICVVDTDLEVDI---VALTE-DQARETLEKRL 247
>gi|440639182|gb|ELR09101.1| hypothetical protein GMDG_03685 [Geomyces destructans 20631-21]
Length = 769
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 72/251 (28%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++PPSALEQL T+ + +
Sbjct: 27 GDKILLPPSALEQLLAASQAVPTPQHNAIRAGFDPFNPYSLTAARAEASQWHDTQQQLPH 86
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL----------------LLDEG 297
P+ F+L N K GR+ ++G+ EF A+EG++ L ++ L L D+
Sbjct: 87 PLTFRLVNPKNGRVIYAGIREFSAEEGQIGLSPSLLDALGVTTEAVGGVEGEPIDLTDDN 146
Query: 298 ELVNIESV-----SLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMI 348
E+ ++ + LP T+ + +P + NP K++LE LR N+ LT+G+++
Sbjct: 147 EVGEVDRIMVHAKQLPKGTYVRLRPLEAGY----NPDDWKSLLERHLRENYTTLTNGEVL 202
Query: 349 AINYNSK---IYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDP 404
I S+ +++ + + P G+A+ +++ D+ VD E VK+ E P
Sbjct: 203 KIPDTSRRGHTFQILIDKFVPEGDAICVVDTDLEVDIEALNEEQARETVKQIMEKAQSAP 262
Query: 405 VDLMPEPSGFV 415
SG V
Sbjct: 263 GTAEGSSSGSV 273
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQL---------------------------------------TRLNICY 52
G KI++PPSALEQL T+ + +
Sbjct: 27 GDKILLPPSALEQLLAASQAVPTPQHNAIRAGFDPFNPYSLTAARAEASQWHDTQQQLPH 86
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N K GR+ ++G+ EF A+EG++ L
Sbjct: 87 PLTFRLVNPKNGRVIYAGIREFSAEEGQIGL 117
>gi|116201739|ref|XP_001226681.1| hypothetical protein CHGG_08754 [Chaetomium globosum CBS 148.51]
gi|88177272|gb|EAQ84740.1| hypothetical protein CHGG_08754 [Chaetomium globosum CBS 148.51]
Length = 765
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 72/219 (32%)
Query: 232 RGGKIIMPPSALEQL----TRLN-----------------------------ICYPMLFK 258
RG KI++P SALEQL T N + +P++F+
Sbjct: 22 RGDKIVLPQSALEQLLASSTGTNGWKSTFIFPASEPSNPYAAAHAQQERPQELPHPLMFQ 81
Query: 259 LTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL------------------------ 294
L N G+ ++G+ EF A EG+V L + L +
Sbjct: 82 LANPATGKTVYAGIREFSASEGEVALSPHIREALGIQELDIQEGPQEDDRISDSRSDKGD 141
Query: 295 ---DEGELVNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDM 347
DEG + +++ LP T+ + +P + NP K +LE LR NF LT G
Sbjct: 142 ENTDEGLRITVKATQLPAGTYVRLRPLEAGY----NPDDWKPLLERQLRGNFTTLTKGST 197
Query: 348 IAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAP 383
I+I +K E +L K G+ + +I+ D+ D P
Sbjct: 198 ISIQ-GTKGEEFRLLADKFLPEGDGICVIDTDLETDIEP 235
>gi|70953485|ref|XP_745841.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526287|emb|CAH80160.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 201
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 244 EQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIE 303
+++T I P +K N K+ RI VL+F A + ++LP ++M++L L ++V ++
Sbjct: 55 DKITMPEITMPNNYKNIN-KLDRI-FINVLDFKAKKNFLFLPNYIMKSLQLKCFDVVRLK 112
Query: 304 SVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLE 363
V L AT QP F + PK +LE LR ++CLT I I +N+ Y V++
Sbjct: 113 FVKLETATSVILQPHDKKFFQLDEPKKILEEKLRYYSCLTKNSTICIFHNNFDYYFDVVK 172
Query: 364 T-----KPGNAVTIIECDMNVDFA 382
K +I + D+ DF
Sbjct: 173 IDSEKKKDVEVASIQDADVIFDFV 196
>gi|358370644|dbj|GAA87255.1| ubiquitin fusion degradation protein [Aspergillus kawachii IFO
4308]
Length = 771
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 69/217 (31%)
Query: 233 GGKIIMPPSALEQL------------------------------------------TRLN 250
G KII+PPSALEQL +
Sbjct: 27 GDKIILPPSALEQLLAAAPLQEVTSSGPARPYTSTFDPFNPHTFAAESQARERAVDRQQQ 86
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD-------------EG 297
+ +P+ F++ N + R+ ++GV EF A E ++ L ++ L +D +G
Sbjct: 87 LPHPLTFRIVNPQNERVVYAGVREFSAPENEIGLSTFLRGALGIDATGPPSQHDDDGTDG 146
Query: 298 EL----------VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGD 346
E+ V + + LP T+ + +P + D N KA+LE LR N+ LTSG+
Sbjct: 147 EVTDDAPAAPTTVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSGE 205
Query: 347 MIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
++ + + ++ V + +P GN + +++ D+ VD
Sbjct: 206 VLTVAGGRDQSFQFLVDKVEPHGNGICVVDTDLEVDI 242
>gi|123457336|ref|XP_001316396.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899101|gb|EAY04173.1| hypothetical protein TVAG_009810 [Trichomonas vaginalis G3]
Length = 74
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 322 FLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
F I++P VL LR+F LT G ++ I++ +IY+L VL+T+P + + I ++N +F
Sbjct: 5 FNKISDPVTVLSKRLRDFPVLTQGSILPIDFAKRIYKLRVLKTEPSDGILINNVNLNTEF 64
Query: 382 APPVGY 387
APP Y
Sbjct: 65 APPDTY 70
>gi|134081316|emb|CAK41819.1| unnamed protein product [Aspergillus niger]
Length = 775
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 73/237 (30%)
Query: 233 GGKIIMPPSALEQL------------------------------------------TRLN 250
G KII+PPSALEQL +
Sbjct: 27 GDKIILPPSALEQLLAAAPLQEVTSSGPARPYTNTFDPFNPHTFAAESQARERAVDRQQQ 86
Query: 251 ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD-------------EG 297
+ +P+ F++ N + R+ ++GV EF A E ++ L ++ L +D +G
Sbjct: 87 LPHPLTFRIVNPQNDRVVYAGVREFSAPENEIGLSTFLRGALGIDGTRQPSPHGGDGNDG 146
Query: 298 EL----------VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGD 346
++ V + + LP T+ + +P + D N KA+LE LR N+ LTSG+
Sbjct: 147 DVTDNAPAAPTTVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSGE 205
Query: 347 MIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNM 401
++ + ++ ++ V + +P GN + +++ D+ VD V TE ++ +E E +
Sbjct: 206 VLTVAGGRNQSFQFLVDKVEPHGNGICVVDTDLEVDI---VALTE-DQARETLEKRL 258
>gi|340939549|gb|EGS20171.1| hypothetical protein CTHT_0046790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 748
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 52/202 (25%)
Query: 232 RGGKIIMPPSALEQLTRLN---------------------------------ICYPMLFK 258
+G KI++P SALEQL + + +P++F+
Sbjct: 26 QGDKILLPQSALEQLLAASSSSAPGMHSFTAFDSHNPYSVAGRRQFRDNDRQLPHPLMFQ 85
Query: 259 LTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL-------------DEGELVNIESV 305
L NQK G ++G+ EF ADEG+V L ++ L + ++G + + +
Sbjct: 86 LINQKNGNTVYAGIREFSADEGEVALSPHLLDALGICESDIAEVSAGRTEDGARIVVRAK 145
Query: 306 SLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAINYNSKIYELCVLET 364
LP + + +P + D + + +LE LR ++ LT G ++ + +K E L
Sbjct: 146 QLPKGEYVRLRPMEAGY-DPDDWRPLLERQLRSSYTTLTKGSILTVQ-GAKGEEFRFLTD 203
Query: 365 K---PGNAVTIIECDMNVDFAP 383
+ G+ + +++ D+ VD P
Sbjct: 204 RFRPEGDGICVVDTDLEVDIEP 225
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 33/86 (38%)
Query: 31 RGGKIIMPPSALEQLTRLN---------------------------------ICYPMLFK 57
+G KI++P SALEQL + + +P++F+
Sbjct: 26 QGDKILLPQSALEQLLAASSSSAPGMHSFTAFDSHNPYSVAGRRQFRDNDRQLPHPLMFQ 85
Query: 58 LTNQKMGRITHSGVLEFVADEGKVYL 83
L NQK G ++G+ EF ADEG+V L
Sbjct: 86 LINQKNGNTVYAGIREFSADEGEVAL 111
>gi|310801479|gb|EFQ36372.1| ubiquitin fusion degradation protein [Glomerella graminicola
M1.001]
Length = 758
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 63/212 (29%)
Query: 232 RGGKIIMPPSALEQL------------------------------------TRLNICYPM 255
RG KI++PPSALEQL + + P+
Sbjct: 28 RGDKILLPPSALEQLLAASPRPPAPANSTFTSYDPFNPYARHHQTQYHHSDSSQQLPNPL 87
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL---------DEGE-------- 298
+F+L NQ G I ++G+ EF AD+G++ L ++M L + GE
Sbjct: 88 MFRLVNQNNGNIVYAGIREFSADDGEIALAPYLMEALGILPTDFGSETSSGEPIDATDDS 147
Query: 299 ------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI- 350
V + + LP T+ + +P + D + K++LE LR ++ LT G ++++
Sbjct: 148 TKHTQPRVTVHANQLPKGTYVRLRPLEAGY-DPDDWKSLLERQLRESYTTLTKGTVLSVR 206
Query: 351 NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ ++ V + P G+ + +++ D+ VD
Sbjct: 207 GVKGEDFKFLVDKFLPEGDGICVVDTDLEVDI 238
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 37/101 (36%)
Query: 31 RGGKIIMPPSALEQL------------------------------------TRLNICYPM 54
RG KI++PPSALEQL + + P+
Sbjct: 28 RGDKILLPPSALEQLLAASPRPPAPANSTFTSYDPFNPYARHHQTQYHHSDSSQQLPNPL 87
Query: 55 LFKLTNQKMGRITHSGVLEFVADEGKVYL-PYWCFSVSMFP 94
+F+L NQ G I ++G+ EF AD+G++ L PY ++ + P
Sbjct: 88 MFRLVNQNNGNIVYAGIREFSADDGEIALAPYLMEALGILP 128
>gi|396491044|ref|XP_003843477.1| similar to ubiquitin fusion degradation protein (Ufd1)
[Leptosphaeria maculans JN3]
gi|312220056|emb|CBX99998.1| similar to ubiquitin fusion degradation protein (Ufd1)
[Leptosphaeria maculans JN3]
Length = 790
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 84/231 (36%)
Query: 233 GGKIIMPPSALEQLTRL---------------------------------------NICY 253
G KI++PPSALEQL + +
Sbjct: 29 GDKILLPPSALEQLLSAAPVVAVDADRPHITAFDPFNPYTYNAERQARAQFQDRHQQLPH 88
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL-----------------LLDE 296
P+ F+L N GR+ H+G+ EF A+EG++ L ++ L L D+
Sbjct: 89 PLTFRLVNPDNGRVVHAGIREFSAEEGEIVLSSFLREALGIEPQPTENSRINTPNGLPDD 148
Query: 297 GEL-----------------VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-N 338
E + + ++ LP TF K +P + D + K++LE LR N
Sbjct: 149 DEHMGNGVEPSVTNGHTRTNITVHAIQLPKGTFVKLRPLEAGY-DPEDWKSLLEEHLRSN 207
Query: 339 FACLTSGDMIAINYNSKI-------YELCVLETKP-GNAVTIIECDMNVDF 381
F LT+G+++ + Y + + V KP G+ + +++ D+ VD
Sbjct: 208 FTTLTNGEVLVV-YGGRAPGGKREEFRFLVDGFKPEGDGICVVDTDLEVDI 257
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQLTRL---------------------------------------NICY 52
G KI++PPSALEQL + +
Sbjct: 29 GDKILLPPSALEQLLSAAPVVAVDADRPHITAFDPFNPYTYNAERQARAQFQDRHQQLPH 88
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N GR+ H+G+ EF A+EG++ L
Sbjct: 89 PLTFRLVNPDNGRVVHAGIREFSAEEGEIVL 119
>gi|189204830|ref|XP_001938750.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985849|gb|EDU51337.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 789
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 82/230 (35%)
Query: 233 GGKIIMPPSALEQLTRL---------------------------------------NICY 253
G K+++PPSALEQL + +
Sbjct: 31 GDKLLLPPSALEQLLAAAPVVHVNADRPHITAFDPFNPYTFNAERHARAQTQDRFQQLPH 90
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD------------------ 295
P+ F+L N + GR+ H+G+ EF A+EG+V L ++ L ++
Sbjct: 91 PLTFRLVNPENGRVVHAGIREFSAEEGQVVLSSFLQEALGIETQSTETSRDGSPNGQMDT 150
Query: 296 ---EGELVN-------------IESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-N 338
EG+ VN + + LP TF K +P + D + K++LE LR N
Sbjct: 151 EDGEGDGVNGLPGNGATAPKITVHAKQLPKGTFVKLRPLEAGY-DPEDWKSLLEEHLRSN 209
Query: 339 FACLTSGDMIAI------NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
F +T+G+++ + + + V KP G+ + +++ D+ VD
Sbjct: 210 FTTMTNGEVLVVYGGRGAGGRREEFRFLVDGFKPEGDGICVVDTDLEVDI 259
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQLTRL---------------------------------------NICY 52
G K+++PPSALEQL + +
Sbjct: 31 GDKLLLPPSALEQLLAAAPVVHVNADRPHITAFDPFNPYTFNAERHARAQTQDRFQQLPH 90
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N + GR+ H+G+ EF A+EG+V L
Sbjct: 91 PLTFRLVNPENGRVVHAGIREFSAEEGQVVL 121
>gi|84997834|ref|XP_953638.1| ubiquitin-fusion degradation pathway component, UFD1 [Theileria
annulata]
gi|65304635|emb|CAI72960.1| ubiquitin-fusion degradation pathway component, UFD1 homologue,
putative [Theileria annulata]
Length = 321
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
+EF DE +YLP W++ NL L ++V +E V L T + + F D+ N K
Sbjct: 205 SAIEFRTDENYIYLPKWIINNLKLKPYDIVLVEPVKLSDCTNVELKCLEKGFYDLKNVKK 264
Query: 331 VLENCLRNFACLTSGDMIAI-----NYNSKIYELCVLETKPGNAVTIIECDMNV 379
+LE+ L+ ++ LT +I I YN ++ +L E + N V+I + D+N+
Sbjct: 265 ILEDRLKYYSTLTINSVIPITVDKKTYNFQVVKLDTAEYQNVNHVSIQDVDINL 318
>gi|380479265|emb|CCF43122.1| ubiquitin fusion degradation protein, partial [Colletotrichum
higginsianum]
Length = 488
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFS 313
P++F+L NQK G ++G+ EF A+EG++ L M+ + L + V + + LP +
Sbjct: 5 PLMFRLVNQKNGNAVYAGIREFSAEEGEIALGPDMLPDSLPETQPRVTVHAKQLPKGIYV 64
Query: 314 KFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVLETKP-GNAV 370
+ +P + D N K++LE LR ++ LT ++A+ + ++ V + P G+ +
Sbjct: 65 RLRPLEAGY-DPDNWKSLLERQLRESYTTLTKDTVLAVRGVKGEHFKFLVDKFLPEGDGI 123
Query: 371 TIIECDMNVDF 381
+++ D+ VD
Sbjct: 124 CVVDTDLEVDI 134
>gi|448536871|ref|XP_003871215.1| hypothetical protein CORT_0G04130 [Candida orthopsilosis Co 90-125]
gi|380355571|emb|CCG25090.1| hypothetical protein CORT_0G04130 [Candida orthopsilosis]
Length = 661
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 233 GGKIIMPPSALEQLTR--LNICYPMLFKLTNQKMGRI-THSGVLEFVADEGKVYLPYWMM 289
K +PP+ L Q+ + + +P +FK+TN I T+ GV EF+ + G++ LP +
Sbjct: 20 SDKANLPPTVLSQIINEGVELPHPFVFKITNDSDPFIYTYIGVKEFIGEPGEIDLPSLVT 79
Query: 290 RNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIA 349
L +++++ +P AT K +P F I+N K LE+ L ++ + G+ I
Sbjct: 80 AKLQNPTTVILDLQR-DIPKATSLKLKPSL--FYPISNWKFFLESRLTHYTLVEKGNTII 136
Query: 350 INYNSKIYELCVLETKPGNAVT---IIECDMNVDFAP 383
I YEL V + ++VT II+ D+ VD P
Sbjct: 137 IEDGGLKYELQVEQINDSDSVTVASIIDTDVTVDMVP 173
>gi|452839282|gb|EME41221.1| hypothetical protein DOTSEDRAFT_73591 [Dothistroma septosporum
NZE10]
Length = 794
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 72/220 (32%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++PPSALEQL R + Y
Sbjct: 28 GDKILLPPSALEQLLSASSNAAAESAQRDLPQYDPYNSSTFSAYRQAESQYQDQRQQLPY 87
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL------------------- 294
P+ F+L N + GR+ ++G+ EF A E ++ +++ +L L
Sbjct: 88 PLTFRLVNPESGRVVYAGIREFSAGESEIVASPFLLESLGLRAEDLAQHEDVMEIDDVQE 147
Query: 295 -----DEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMI 348
G ++ + + LP TF K +P + D + KA+LE LR N+ LT+G+++
Sbjct: 148 KEKPARSGPVITVHAKQLPKGTFVKLRPLEAGY-DPEDWKALLEQHLRSNYTTLTTGEVL 206
Query: 349 ------AINYNSKIYELCVLETKPG-NAVTIIECDMNVDF 381
+ + + V KP + + +++ D+ VD
Sbjct: 207 VMPGGRGVGGKKEEFRFLVDGFKPEVDGICVVDTDLEVDI 246
>gi|389584086|dbj|GAB66819.1| ubiquitin fusion degradation protein UFD1 [Plasmodium cynomolgi
strain B]
Length = 684
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 232 RGGKIIMPPSALEQLT----RLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
K+I+P S L+ L R + +P F L N + ITH VLEF ++EG +++
Sbjct: 80 HSDKVILPVSILKTLEKGFYRSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 288 MMRNLLLDEGELVN---IESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRN-FACLT 343
+ NL + + + + ++P F KF+ + +I K +L+N L ++ LT
Sbjct: 140 VKENLGIKQNSGIVRLLVTYANIPKCDFIKFESLNENTSNIKFMKNLLQNELNLNYSTLT 199
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDN 400
GD + IN N Y + E +P NAV++I D+ VD E + V EK+E++
Sbjct: 200 LGDYVHIN-NLSFY---ISELEPDNAVSLINTDITVDIC------ERKNVGEKKEES 246
>gi|302830264|ref|XP_002946698.1| hypothetical protein VOLCADRAFT_86921 [Volvox carteri f.
nagariensis]
gi|300267742|gb|EFJ51924.1| hypothetical protein VOLCADRAFT_86921 [Volvox carteri f.
nagariensis]
Length = 418
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 268 THSGVLEFVADEGKVYLPYWMMRNLL--LDE--GELVNIESVSLPVATFSKFQPQTCDFL 323
TH+GVLEF A EG V LP ++ +L LD V + L T+ + QP + F
Sbjct: 107 THAGVLEFTAPEGTVLLPRKVVHSLYGSLDAQPSGTVIVSYRRLEKGTYVRLQPMSHGFH 166
Query: 324 DITNPKAVLENCLRN--FACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDF 381
+ + L+ GD + + + + + L V E +P NAV++I+ D+ D
Sbjct: 167 EALGEGLRETLEEELLGHSTLSEGDWVTVVHGGRDWPLRVQELQPSNAVSVIDVDIAADV 226
Query: 382 APPV 385
P +
Sbjct: 227 VPSL 230
>gi|167518107|ref|XP_001743394.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778493|gb|EDQ92108.1| predicted protein [Monosiga brevicollis MX1]
Length = 558
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 223 PGNEREDVERGGKIIMPPSALEQLT-RLNICYPMLFKLTNQKMGRITHS---GVLEFVAD 278
P E+ + + +P + LE L+ R+ P+ + G ++ S GV F A
Sbjct: 17 PAAEQRERNFTDLVSLPTAMLEPLSGRMQSGEPLYLRFFPNAFGDLSKSVTAGVGHFDAP 76
Query: 279 EGKVYLPYWMMRNLLLDEGELVN---IESVSLPVATFSKFQPQTCDFLDITNPKAVLENC 335
YLP WMM L + EG + +E +LP A + + FL++ NP+AVLEN
Sbjct: 77 PDTFYLPVWMMEVLGVKEGARIRFEVVEGTALPRADTVQLKANDPAFLELPNPRAVLENA 136
Query: 336 L----RNFACLTSGDMIAINYNSKIYELCVLETK 365
L R + SGD +++Y V ET+
Sbjct: 137 LSASYRTLTEIKSGD-------AEVYVASVDETR 163
>gi|320581812|gb|EFW96031.1| ubiquitin fusion degradation protein (Ufd1), putative [Ogataea
parapolymorpha DL-1]
Length = 595
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 232 RGGKIIMPPSALEQLTRLN--ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMM 289
KI +P S LE L + + + +P+ F+L + ++GV EF A E V++ +
Sbjct: 16 HSDKIDLPASVLESLVKQHDPLPHPLTFRLATAT--NVCYAGVREFSAPEDTVFVSGDLF 73
Query: 290 RNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFAC-LTSGDMI 348
L + G V E + LP AT +P + +I + K LE L + C LT G +
Sbjct: 74 EALKGEGGFPVQAELIELPKATDLSIKPLKL-YKNILDWKWFLEAKLTKYYCSLTRGQTL 132
Query: 349 AINYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
+ YEL + + +P V II+ D+N+D P
Sbjct: 133 HLEDEFGSYELLIDKLEPAPTVCIIDTDINLDVVP 167
>gi|400599671|gb|EJP67368.1| ubiquitin fusion degradation protein [Beauveria bassiana ARSEF
2860]
Length = 730
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 40/185 (21%)
Query: 233 GGKIIMPPSALEQLTRLNICY----------------PMLFKLTNQKMGRITHSGVLEFV 276
G KII+P SALEQL + P+ F+L N + ++G+ EF
Sbjct: 28 GDKIILPQSALEQLLSASASQAVMQDKYTTASSHLPNPLTFRLVNPTCNKSVYAGIREFS 87
Query: 277 ADEGKVYLPYWMMRNLLLDEGE--------------LVNIESVSLPVATFSKFQPQTCDF 322
A EG V L +++ L L E + + + +LP T+++ +P +
Sbjct: 88 APEGTVILSPYLLSALGLATDEKATTTTSSSTVSEIRLEVHTETLPKGTYARLRPLEAGY 147
Query: 323 LDITNP---KAVLENCL-RNFACLTSGDMIAIN-YNSKIYELCVLETKP-GNAVTIIECD 376
NP + +LE L R+F LT I ++ ++++L V + P G V +++ D
Sbjct: 148 ----NPDDWRPLLERQLQRDFTSLTKNAKILVHGVRGEVFQLLVDKLSPEGQGVCVVDTD 203
Query: 377 MNVDF 381
+ VD
Sbjct: 204 LEVDI 208
>gi|150866369|ref|XP_001385946.2| hypothetical protein PICST_61783 [Scheffersomyces stipitis CBS
6054]
gi|149387625|gb|ABN67917.2| ubiquitin fusion degradation protein [Scheffersomyces stipitis CBS
6054]
Length = 717
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 233 GGKIIMPPSALEQLTRL----NICYPMLFKLTNQKMGRITHSGVLEFVADEGK-VYLPYW 287
K I+P S L ++ + + +P++FK+T+ + + GV EF A E + V LP W
Sbjct: 21 SDKAILPASVLSRIVDIIPESELPHPLIFKITSSESLGSCYIGVREFSAPEDETVVLPDW 80
Query: 288 MMRNLLLDEGELVNIE-SVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRN-FACLTSG 345
+ LL E V ++ S+ AT K +P + +ITN K LEN L + LTS
Sbjct: 81 IFTKLLEPESVTVELQLKSSISKATSLKLKPLQL-YSNITNWKYFLENKLTQYYTTLTSK 139
Query: 346 DMIAINYNSKIYELCVLET-----KPGNAVTIIECDMNVDFAP 383
+ + I ++ YEL + E KP A +II+ D+ +D P
Sbjct: 140 ETLVIEDDNLRYELYIEEINGEAHKPVTA-SIIDTDIVLDVVP 181
>gi|399217646|emb|CCF74533.1| unnamed protein product [Babesia microti strain RI]
Length = 283
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
GVL+F A +G ++LP WM +L + E ++V + L A + +P + + + K+
Sbjct: 158 GVLDFRAPDGFIFLPPWMFSSLNIKERDIVRVHKTRLSDAISVRLRPTSGSIFSVEDQKS 217
Query: 331 VLENCLRNFACLTSGDMIAI-------NYNSKIYELCVLETKPGNAVTIIECDMNVDFAP 383
LE L+ ++ LT I+I +N K+ + + A +I + D+ VD P
Sbjct: 218 FLEKRLKYYSNLTKNTTISILDQNSNNVFNFKVVNIATENKENVEAASIQDVDVAVDLLP 277
>gi|320588058|gb|EFX00533.1| ubiquitin fusion degradation protein [Grosmannia clavigera kw1407]
Length = 742
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 232 RGGKIIMPPSALEQL----------------TRLNICYPMLFKLTNQKMGRITHSGVLEF 275
+G KI++PPSAL+ L + ++ P+ F+L N R +G+ EF
Sbjct: 28 QGDKILLPPSALQTLLDAAARAQLQAGSSSNSSGDLPQPLTFRLVNTANQRAVFAGIREF 87
Query: 276 VADEGKVYLPYWMMRNLLLDEGE----------LVNIESVSLPVATFSKFQPQTCDFLDI 325
ADEG V L ++ L +++ E L+ + LP TF +P + +
Sbjct: 88 SADEGHVVLSPYLRAALGVEDDEDGGDNGNKNHLIAVAFAPLPKGTFVHLRPLEAGY-NP 146
Query: 326 TNPKAVLENCLRN-FACLTSGDMIAINYNS--KIYELCVLETKPG-NAVTIIECDMNVDF 381
+ +A+LE LR F LT ++ + ++ + + L + +P + + +++ D+ VD
Sbjct: 147 ADWRALLERQLREAFTTLTRNALLTVRGSTADETFHLRIDGFQPATDGICVVDTDLEVDI 206
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 23/92 (25%)
Query: 31 RGGKIIMPPSALEQL----------------TRLNICYPMLFKLTNQKMGRITHSGVLEF 74
+G KI++PPSAL+ L + ++ P+ F+L N R +G+ EF
Sbjct: 28 QGDKILLPPSALQTLLDAAARAQLQAGSSSNSSGDLPQPLTFRLVNTANQRAVFAGIREF 87
Query: 75 VADEGKVYL-PYWCFSVSMFPGNEREDVERGG 105
ADEG V L PY ++ + ED E GG
Sbjct: 88 SADEGHVVLSPYLRAALGV------EDDEDGG 113
>gi|294950381|ref|XP_002786601.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900893|gb|EER18397.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 578
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 229 DVERGGKIIMPPSALEQLTRLN---ICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLP 285
D G ++ +P LE+L + +P++F++ N H GV EF A G+V +
Sbjct: 82 DALGGDRVDLPQEVLEKLQAFGDDKVKFPLMFEIYNPTNDTRLHCGVREFSALTGQVLVG 141
Query: 286 YWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTS 344
+ L L GE V I LP+ T K D + ++VLE L NF LT
Sbjct: 142 PQLAGGLGLMPGEAVRIRYKVLPLCTSVKLVASGTTLGDYRDFRSVLERFLSTNFCTLTL 201
Query: 345 GDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTE 389
G + I+ + V +P AV ++ D+++D + E
Sbjct: 202 GQVFEIDG----VNVHVAGIEPAPAVCVVNADIDLDLTTKIEAAE 242
>gi|448107169|ref|XP_004200927.1| Piso0_003537 [Millerozyma farinosa CBS 7064]
gi|448110168|ref|XP_004201558.1| Piso0_003537 [Millerozyma farinosa CBS 7064]
gi|359382349|emb|CCE81186.1| Piso0_003537 [Millerozyma farinosa CBS 7064]
gi|359383114|emb|CCE80421.1| Piso0_003537 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 233 GGKIIMPPSALEQLTRL----NICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWM 288
K+I+P + L ++ ++ +P++FKL+N K + GV EF +D+ + LP +
Sbjct: 19 SDKVILPQNVLSEIILAFGEGDLPHPIVFKLSNGK--ETCYVGVKEF-SDDNYLKLPELI 75
Query: 289 MRNLLLDEGELVNIESVS-LPVATFSKFQPQTCDFLDITNPKAVLENCLRNF-ACLTSGD 346
L L++ V + V+ +P T+ QP + +++ K LE+ L N+ L GD
Sbjct: 76 WEKLRLEDDVYVRADLVTNIPKGTYLSLQPLAF-YPQVSSWKYFLESNLTNYYTVLHKGD 134
Query: 347 MIAINYNSKIYELCVLET-KPGNAVTIIECDMNVDFAP 383
++ + YN ++EL +L + + V II+ D+ +D P
Sbjct: 135 ILKLEYNDYLFELKILSVGEDCDIVNIIDTDLVLDVVP 172
>gi|66358660|ref|XP_626508.1| ubiquitin fusion degradation (UFD1) family protein, double Psi beta
barrel fold [Cryptosporidium parvum Iowa II]
gi|46227780|gb|EAK88700.1| ubiquitin fusion degradation (UFD1) family protein, double Psi beta
barrel fold [Cryptosporidium parvum Iowa II]
Length = 658
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 222 FPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLF--KLTNQKMGRI-----THSGVLE 274
FP N D ++I+P + L+ L+ YP+ F K N + TH GVL+
Sbjct: 106 FPNNGETD-----QVILPNNLLKILSSDESIYPLYFNIKCLNHHISENINPIETHCGVLD 160
Query: 275 FVADEGKVYLPYWMMRNLLLDEGE----------LVNIESVSLPVATFSKFQP-QTCDFL 323
+ + G + LP ++R L ++ + + I L +F+ F+ D
Sbjct: 161 YSEEPGYISLPNKVLRCLNINPNDSDFKSNKPIIWIQITYKKLLKGSFASFEILNNQDIF 220
Query: 324 DITNPKAVLENCLRN-FACLTSGDMIAI---NYNSKIYELCVLETK---PGNAVTIIECD 376
+ + +++LE+ LRN F LT GD + I NY+S Y + +++ K P N++++I D
Sbjct: 221 KMHDIESLLESYLRNHFLTLTIGDTLMINQPNYSSNNYCISLIKVKHLEPDNSISLINTD 280
Query: 377 MNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLM 408
+++D E + +++ E+ + + + LM
Sbjct: 281 ISLDITYKDSKNE-QTIQDHAENTIENSIRLM 311
>gi|449296937|gb|EMC92956.1| hypothetical protein BAUCODRAFT_37870 [Baudoinia compniacensis UAMH
10762]
Length = 791
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 70/218 (32%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++PPSALE L + + Y
Sbjct: 26 GDKILLPPSALEALLSASSNRAAENARRDLPAYDPYNSATYSAYRQAESQYQDQKQQLPY 85
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE--------------- 298
P+ F+L N + GR+ ++G+ EF A+EG+V L ++ L L E +
Sbjct: 86 PLTFRLVNPESGRVVYAGIREFSAEEGEVVLSPFLRETLGLSEQQHESKEASMTVDGEEG 145
Query: 299 -------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMI-- 348
+ + + L TF K +P + D + KA+LE LR N+ LT+G ++
Sbjct: 146 VNGVHRPTITVHARQLDKGTFVKLRPLEAGY-DPEDWKALLEQYLRQNYTTLTNGAVLIV 204
Query: 349 ----AINYNSKIYELCVLETKPG-NAVTIIECDMNVDF 381
+ + + V KP + V I++ D+ VD
Sbjct: 205 PGGRGMGGKKEEFRFLVDGFKPDVDGVCIVDTDLEVDI 242
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQL---------------------------------------TRLNICY 52
G KI++PPSALE L + + Y
Sbjct: 26 GDKILLPPSALEALLSASSNRAAENARRDLPAYDPYNSATYSAYRQAESQYQDQKQQLPY 85
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N + GR+ ++G+ EF A+EG+V L
Sbjct: 86 PLTFRLVNPESGRVVYAGIREFSAEEGEVVL 116
>gi|429855779|gb|ELA30720.1| ubiquitin fusion degradation protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 729
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 61/210 (29%)
Query: 232 RGGKIIMPPSALEQL----------------------------------TRLNICYPMLF 257
RG KI++P SALEQL T + P++F
Sbjct: 28 RGDKILLPQSALEQLLAASPRPPAPSNSSFTSYDPFNPYARQHQAAYRDTSQQLPNPLMF 87
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLL----------------------- 294
+L NQK G + ++G+ EF A+EG++ L ++M L +
Sbjct: 88 RLVNQKNGNVVYAGIREFSAEEGEIALGSYLMDALGILPSEFKSDGTGSKPLDLTAEMDH 147
Query: 295 DEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NY 352
D V + + LP T+ + +P + + + K++LE LR ++ LT ++++
Sbjct: 148 DAQPRVTVHAKQLPKGTYVRLRPLEAGY-NPDDWKSLLERQLRESYTTLTKDTILSVRGV 206
Query: 353 NSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ ++ + + P G+ + +++ D+ VD
Sbjct: 207 KGEQFKFLIDKFLPDGDGICVVDTDLEVDI 236
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 35/105 (33%)
Query: 31 RGGKIIMPPSALEQL----------------------------------TRLNICYPMLF 56
RG KI++P SALEQL T + P++F
Sbjct: 28 RGDKILLPQSALEQLLAASPRPPAPSNSSFTSYDPFNPYARQHQAAYRDTSQQLPNPLMF 87
Query: 57 KLTNQKMGRITHSGVLEFVADEGKVYL-PYWCFSVSMFPGNERED 100
+L NQK G + ++G+ EF A+EG++ L Y ++ + P + D
Sbjct: 88 RLVNQKNGNVVYAGIREFSAEEGEIALGSYLMDALGILPSEFKSD 132
>gi|237839821|ref|XP_002369208.1| hypothetical protein TGME49_085700 [Toxoplasma gondii ME49]
gi|211966872|gb|EEB02068.1| hypothetical protein TGME49_085700 [Toxoplasma gondii ME49]
Length = 398
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP-- 328
VL+F A ++LP W+M+ L L +V + LP+A QP + F+
Sbjct: 234 SVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSSAFVRAVQATG 293
Query: 329 ---KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPP 384
+ VLE +R+++ LT+ +I + + + L V + + GNA T + D
Sbjct: 294 RDIQKVLEQEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGEDADHVCVQDSD 353
Query: 385 VGYT-EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
V T P K +E+ E EPS TG + + +R+KK T +T
Sbjct: 354 VATTLLPAKDEERTET----------EPSAVAQGRLTGEQ-EKQREKKRTEDT 395
>gi|221056851|ref|XP_002259563.1| Ubiquitin fusion degradation protein UFD1 [Plasmodium knowlesi
strain H]
gi|193809635|emb|CAQ40336.1| Ubiquitin fusion degradation protein UFD1,putative [Plasmodium
knowlesi strain H]
Length = 661
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 232 RGGKIIMPPSALEQLTR----LNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
K+I+P S L+ L + + +P F L N + ITH VLEF ++EG +++
Sbjct: 80 HSDKVILPVSILKTLEKGFYKSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 288 MMRNLLLDEGELVN---IESVSLPVATFSKFQPQTCDFLDITNPK-AVLENCLRNFACLT 343
+ NL + + + + ++P F KF+ + +I K + N++ LT
Sbjct: 140 VKENLGIKQKSGIVRLLVTYANIPKCDFIKFESLNENTRNIKFMKNLLQNELNLNYSTLT 199
Query: 344 SGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMID 403
GD + IN N Y + E +P NAV++I D+ VD TE + ++ +
Sbjct: 200 LGDYVHIN-NLSFY---ISELEPDNAVSLINTDITVDICERKNATEKKDESSNCLNDFYE 255
Query: 404 PVD 406
P++
Sbjct: 256 PIN 258
>gi|330930438|ref|XP_003303033.1| hypothetical protein PTT_15056 [Pyrenophora teres f. teres 0-1]
gi|311321255|gb|EFQ88868.1| hypothetical protein PTT_15056 [Pyrenophora teres f. teres 0-1]
Length = 774
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 82/230 (35%)
Query: 233 GGKIIMPPSALEQLTRL---------------------------------------NICY 253
G K+++PPSALEQL + +
Sbjct: 31 GDKLLLPPSALEQLLAAAPVVHVDADRPHITAFDPFNPYTFNAERHARAQTQDRFQQLPH 90
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE----------------- 296
P+ F+L N GR+ H+G+ EF A+EG+V L ++ L ++
Sbjct: 91 PLTFRLVNPDNGRVVHAGIREFSAEEGQVVLSSFLQEALGIEAQSTETSRGGSPNGHISN 150
Query: 297 ----GELVN-------------IESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-N 338
G+ VN + + LP TF K +P + D + K++LE LR N
Sbjct: 151 EEGTGDGVNALSGNGAAAPKITVHAKQLPKGTFVKLRPLEAGY-DPEDWKSLLEEHLRSN 209
Query: 339 FACLTSGDMIAINYNSKI------YELCVLETKP-GNAVTIIECDMNVDF 381
F LT+G+++ + + + V KP G+ + +++ D+ VD
Sbjct: 210 FTTLTNGEVLVVYGGRGVGGKREEFRFLVDGFKPEGDGICVVDTDLEVDI 259
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQLTRL---------------------------------------NICY 52
G K+++PPSALEQL + +
Sbjct: 31 GDKLLLPPSALEQLLAAAPVVHVDADRPHITAFDPFNPYTFNAERHARAQTQDRFQQLPH 90
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N GR+ H+G+ EF A+EG+V L
Sbjct: 91 PLTFRLVNPDNGRVVHAGIREFSAEEGQVVL 121
>gi|221484588|gb|EEE22882.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 390
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP-- 328
VL+F A ++LP W+M+ L L +V + LP+A QP + F+
Sbjct: 226 SVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSSAFVRAVQATG 285
Query: 329 ---KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPP 384
+ VLE +R+++ LT+ +I + + + L V + + GNA T + D
Sbjct: 286 RDIQKVLEEEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGEDADHVCVQDSD 345
Query: 385 VGYT-EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
V T P K +E+ E EPS TG + + +R+KK T +T
Sbjct: 346 VATTLLPAKDEERTE----------TEPSAVAQGRLTGEQ-EKQREKKRTEDT 387
>gi|452977171|gb|EME76944.1| hypothetical protein MYCFIDRAFT_168973 [Pseudocercospora fijiensis
CIRAD86]
Length = 787
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 73/221 (33%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++PPSALE L + + Y
Sbjct: 26 GDKILLPPSALEALLSASSNLAAETARRDLPQYDPYNSATYSAYRQAESQYQDQKQQLPY 85
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESV-------- 305
P+ F+L + + GR+ ++G+ EF A EG+V L +++ L L +L E V
Sbjct: 86 PLTFRLVHPESGRVVYAGIREFSASEGQVVLSSFLLETLGLSAEDLHKHEDVMQMDEEEG 145
Query: 306 -----------------SLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGD- 346
LP TF K +P + D + KA+LE LR N+ LT+G+
Sbjct: 146 APPANGVSGPQLTVHARQLPKGTFVKLRPLEPGY-DPEDWKALLEQHLRANYTTLTNGEV 204
Query: 347 -----MIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ + Y V KP + + +++ D+ VD
Sbjct: 205 LVVPGGRGVGGQKEEYRFLVDGFKPEADGICVVDTDLEVDI 245
>gi|255761618|gb|ACU32852.1| apicoplast ubiquitin fusion degradation protein [Toxoplasma gondii]
Length = 521
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 272 VLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP--- 328
VL+F A ++LP W+M+ L L +V + LP+A QP + F+
Sbjct: 358 VLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSSAFVRAVQATGR 417
Query: 329 --KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPPV 385
+ VLE +R+++ LT+ +I + + + L V + + GNA T + D V
Sbjct: 418 DIQKVLEQEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGEDADHVCVQDSDV 477
Query: 386 GYT-EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
T P K +E+ E EPS TG + + +R+KK T +T
Sbjct: 478 ATTLLPAKDEERTET----------EPSAVAQGRLTGEQ-EKQREKKRTEDT 518
>gi|82793980|ref|XP_728256.1| ubiquitin fusion degradation 1 [Plasmodium yoelii yoelii 17XNL]
gi|23484517|gb|EAA19821.1| similar to ubiquitin fusion degradation 1 like-related [Plasmodium
yoelii yoelii]
Length = 209
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 267 ITHSGVLEFVADEGKVYLPYWMMRNL-LLDEGELVN--IESVSLPVATFSKFQPQTCDFL 323
+TH+ VLEF ++EG + + + NL + ++ ++ I +L F KF+ +
Sbjct: 1 MTHACVLEFSSNEGIIEVSENIKENLGIFEKNGVIRILISYANLSKCDFIKFESLNENIN 60
Query: 324 DITNPKAVLENCLR-NFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVD 380
DI K +LEN L N++ LT GD + IN N K Y + E +P NAV++I D+ VD
Sbjct: 61 DIKYVKNLLENKLSLNYSTLTLGDYVHIN-NLKFY---ISELEPDNAVSLINTDITVD 114
>gi|346323978|gb|EGX93576.1| ubiquitin fusion degradation protein (Ufd1), putative [Cordyceps
militaris CM01]
Length = 729
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 39/184 (21%)
Query: 233 GGKIIMPPSALEQL----------------TRLNICYPMLFKLTNQKMGRITHSGVLEFV 276
G KII+P SALEQL + + +P++F+L N+ + ++G+ EF
Sbjct: 28 GDKIILPQSALEQLLNAAASQAVTQDNYTTSSSQLPHPLIFRLVNRITKKAVYAGIREFS 87
Query: 277 ADEGKVYLPYWMMRNL-------------LLDEGELVNIESVSLPVATFSKFQPQTCDFL 323
A EG V L +++ L L D ++I + +L T+++ +P +
Sbjct: 88 APEGTVMLSPYLLSALDLATDQDNAKNSSLADPPTQLDIFAATLRKGTYARLRPLEAGY- 146
Query: 324 DITNP---KAVLENCL-RNFACLTSGDMIAIN-YNSKIYELCVLETKP-GNAVTIIECDM 377
NP + +LE L R+F LT I ++ +++ L V + P V +++ D+
Sbjct: 147 ---NPEDWRPLLERQLRRDFTSLTKDATILVHGVRGEVFRLLVDKLLPEAEGVCVVDTDL 203
Query: 378 NVDF 381
VD
Sbjct: 204 EVDI 207
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 20/101 (19%)
Query: 32 GGKIIMPPSALEQL----------------TRLNICYPMLFKLTNQKMGRITHSGVLEFV 75
G KII+P SALEQL + + +P++F+L N+ + ++G+ EF
Sbjct: 28 GDKIILPQSALEQLLNAAASQAVTQDNYTTSSSQLPHPLIFRLVNRITKKAVYAGIREFS 87
Query: 76 ADEGKVYL-PYWCFSVSMFPGNEREDVERGGKIIMPPSALE 115
A EG V L PY ++ + +D + + PP+ L+
Sbjct: 88 APEGTVMLSPYLLSALDLATD---QDNAKNSSLADPPTQLD 125
>gi|239609072|gb|EEQ86059.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
ER-3]
gi|327356440|gb|EGE85297.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis ATCC
18188]
Length = 808
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 80/228 (35%)
Query: 233 GGKIIMPPSALEQL-----------------------------------------TRLNI 251
G KI++PPSALEQL + +
Sbjct: 27 GDKILLPPSALEQLLAAAPVTSIESAHTHSLTPQFDPFNPHTFAAERRARELVADRQQQL 86
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE------------- 298
P+ F++ N GRI H+G+ EF A E +V L ++ ++L LD+G+
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRQSLGLDDGDFPSAGKRVISAEE 146
Query: 299 ----------------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
+V I + LP T+ + +P + D + KA+LE L
Sbjct: 147 SPSDVDMLEPGDGNISNIPEGPIVTIHARQLPKGTYVRLRPLEAGY-DPEDWKALLERHL 205
Query: 337 R-NFACLTSGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
R NF LT G+++ I ++ + V + +P G+ + I++ D+ VD
Sbjct: 206 RENFTTLTLGELLLIPGGRNETFRFLVDKVEPQGDGICIVDTDLEVDI 253
>gi|261188075|ref|XP_002620454.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
SLH14081]
gi|239593329|gb|EEQ75910.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
SLH14081]
Length = 808
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 80/228 (35%)
Query: 233 GGKIIMPPSALEQL-----------------------------------------TRLNI 251
G KI++PPSALEQL + +
Sbjct: 27 GDKILLPPSALEQLLAAAPITSIESAHTHSLTPQFDPFNPHTFAAERRARELVADRQQQL 86
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE------------- 298
P+ F++ N GRI H+G+ EF A E +V L ++ ++L LD+G+
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRQSLGLDDGDFPSAGKRVISAEE 146
Query: 299 ----------------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
+V I + LP T+ + +P + D + KA+LE L
Sbjct: 147 SPSDVDMLEPGDGNISNIPEGPIVTIHARQLPKGTYVRLRPLEAGY-DPEDWKALLERHL 205
Query: 337 R-NFACLTSGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
R NF LT G+++ I ++ + V + +P G+ + I++ D+ VD
Sbjct: 206 RENFTTLTLGELLLIPGGRNETFRFLVDKVEPQGDGICIVDTDLEVDI 253
>gi|154301107|ref|XP_001550967.1| hypothetical protein BC1G_10526 [Botryotinia fuckeliana B05.10]
Length = 749
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 91/242 (37%), Gaps = 98/242 (40%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++P SALEQL T+ + +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL--------------------- 292
P+ F+L N K G + ++G+ EF ADEG+V L +++ L
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVLSPFLLEALGITAPLRNPTPPSSKVESRRG 146
Query: 293 -----------------------LLDEGE---LVNIESVSLPVATFSKFQPQTCDFLDIT 326
L DE E + + + LP T+ + +P +
Sbjct: 147 SPDTPIDLTDNPAIDLTGDEMIDLTDETEEPAQITVHAKQLPKGTYVRLRPLEAGY---- 202
Query: 327 NP---KAVLENCLR-NFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNV 379
NP K++LE +R NF LT G+++ + SK E L K G+AV +++ D+ V
Sbjct: 203 NPEDWKSLLEKHMRENFTTLTKGEILTVR-GSKSEEFRFLIDKFAPEGDAVCVVDTDLEV 261
Query: 380 DF 381
D
Sbjct: 262 DI 263
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQL---------------------------------------TRLNICY 52
G KI++P SALEQL T+ + +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N K G + ++G+ EF ADEG+V L
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVL 117
>gi|221504782|gb|EEE30447.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP-- 328
VL+F A ++LP W+M+ L L +V + LP+A QP + F+
Sbjct: 234 SVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSSAFVRAVQATG 293
Query: 329 ---KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIECDMNVDFAPP 384
+ VLE +R+++ LT+ +I + + + L V + + GNA T + D
Sbjct: 294 RDIQKVLEEEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGEDADHVCVQDSD 353
Query: 385 VGYT-EPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVET 436
V T P K +E+ E PS TG + + +R+KK T +T
Sbjct: 354 VATTLLPAKDEERTETA----------PSAVAQGRLTGEQ-EKQREKKRTEDT 395
>gi|347840342|emb|CCD54914.1| similar to ubiquitin fusion degradation protein (Ufd1) [Botryotinia
fuckeliana]
Length = 792
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 91/242 (37%), Gaps = 98/242 (40%)
Query: 233 GGKIIMPPSALEQL---------------------------------------TRLNICY 253
G KI++P SALEQL T+ + +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL--------------------- 292
P+ F+L N K G + ++G+ EF ADEG+V L +++ L
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVLSPFLLEALGITAPLRNPTPPSSKVESRRG 146
Query: 293 -----------------------LLDEGE---LVNIESVSLPVATFSKFQPQTCDFLDIT 326
L DE E + + + LP T+ + +P +
Sbjct: 147 SPDTPIDLTDNPAIDLTGDEMKDLTDETEEPAQITVHAKQLPKGTYVRLRPLEAGY---- 202
Query: 327 NP---KAVLENCLR-NFACLTSGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNV 379
NP K++LE +R NF LT G+++ + SK E L K G+AV +++ D+ V
Sbjct: 203 NPEDWKSLLEKHMRENFTTLTKGEILTVR-GSKSEEFRFLIDKFAPEGDAVCVVDTDLEV 261
Query: 380 DF 381
D
Sbjct: 262 DI 263
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 39/91 (42%)
Query: 32 GGKIIMPPSALEQL---------------------------------------TRLNICY 52
G KI++P SALEQL T+ + +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 53 PMLFKLTNQKMGRITHSGVLEFVADEGKVYL 83
P+ F+L N K G + ++G+ EF ADEG+V L
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVL 117
>gi|354547965|emb|CCE44700.1| hypothetical protein CPAR2_405040 [Candida parapsilosis]
Length = 653
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 233 GGKIIMPPSALEQLT--RLNICYPMLFKLTNQKMGRI-THSGVLEFVADEGKVYLPYWMM 289
K I+P + L ++ + + +P++FK+TNQ + T+ GV EF ++ G+V LP ++
Sbjct: 20 SDKAILPANILSEIINDEIELPHPLIFKITNQSDPFVYTYIGVKEFTSEPGEVILPSFV- 78
Query: 290 RNLLLDEGELVNIE-SVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMI 348
N L V++E ++P A +P+ + ++ N K LE LR++ + D +
Sbjct: 79 -NAKLQNPTDVSLELERNIPKAISLCIKPKLF-YANVKNWKFFLEEKLRDYTVVNRNDCV 136
Query: 349 AINYNSKIYELCVLETKPGNAVT---IIECDMNVDFAP 383
I + YEL V + + VT II+ D+ +D P
Sbjct: 137 IIEDDGLKYELIVEQINGPDNVTVASIIDTDVTLDIVP 174
>gi|336276448|ref|XP_003352977.1| hypothetical protein SMAC_03295 [Sordaria macrospora k-hell]
gi|380092461|emb|CCC09738.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 784
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 83/231 (35%)
Query: 232 RGGKIIMPPSALEQL----------------------------------------TRLNI 251
+G KI++P SALEQL T +
Sbjct: 28 QGDKILLPQSALEQLLSASTTISTTPSNPHTFTAFDPYNPYSVAAARRERSNFRETTQQL 87
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL------------------- 292
+P++F+L NQK G +G+ EF A+EG+V L +++ L
Sbjct: 88 PHPLMFQLVNQKNGNSVFAGIREFSANEGEVALSPYLLEALGIHEDDIKDTSAPADAQTE 147
Query: 293 --------------LLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENC 335
+ EG + +++ LP T+ + +P + NP K++LE
Sbjct: 148 GPEVVDLTQDDAISQITEGYRITVKARQLPKGTYVRLRPLEAGY----NPDDWKSLLERQ 203
Query: 336 LR-NFACLTSGDMIAIN-YNSKIYELCVLETKP-GNAVTIIECDMNVDFAP 383
LR ++ LT ++++ + + V + +P GN + +++ D+ VD P
Sbjct: 204 LRASYTTLTKDSILSVTGVKGEEFRFLVDKFQPEGNGICVVDTDLEVDIEP 254
>gi|240281281|gb|EER44784.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H143]
Length = 716
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 72/220 (32%)
Query: 233 GGKIIMPPSALEQL------TRLNICY--------------------------------- 253
G KI++PPSALEQL T + +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 254 --PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GE------- 298
P+ F+L N GR+ H+G+ EF A E +V L ++ ++L LD+ GE
Sbjct: 89 PNPLTFRLVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEDSSSDVD 148
Query: 299 --------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
LV I + LP ++ + +P + D + KA+LE LR NF LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 344 SGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
G+++ I ++ + V + +P G+ + I++ D+ VD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|302405264|ref|XP_003000469.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361126|gb|EEY23554.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 763
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 66/212 (31%)
Query: 232 RGGKIIMPPSALEQL--------TRLNICY--------------------------PMLF 257
RG KI++P SALEQL T N + P+ F
Sbjct: 33 RGDKILLPQSALEQLLAASPSSPTHPNQTFSSSRVAFNPYATHQSGPYRETSQLPNPLTF 92
Query: 258 KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------------ 299
+L N G H+G+ EF A+EG+V L ++M L +D
Sbjct: 93 RLVNPINGNAVHAGIREFSAEEGQVALGPYLMEALGIDSSMFASESDTDSEAHMTSDQSK 152
Query: 300 ----VNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI- 350
+ I + LP T+ + +P + NP K++LE LR +F LT ++A+
Sbjct: 153 AYPRITIHAKYLPKGTYVRLRPLEAGY----NPDDWKSLLERQLRQSFTTLTKDAVLAVR 208
Query: 351 NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ ++ + + P G+ + +++ D+ VD
Sbjct: 209 GVKGEQFQFLIDKFSPEGDGICVVDTDLEVDI 240
>gi|156056841|ref|XP_001594344.1| hypothetical protein SS1G_04151 [Sclerotinia sclerotiorum 1980]
gi|154701937|gb|EDO01676.1| hypothetical protein SS1G_04151 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 787
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 100/271 (36%), Gaps = 106/271 (39%)
Query: 204 PDIPRPFNRSYKCFSVSM--FPGNEREDVERGGKIIMPPSALEQL--------------- 246
PDI ++ YK S PG+ KI++P SALEQL
Sbjct: 5 PDISLKWSSVYKVASKDSISLPGD---------KILLPQSALEQLLAASTVTVNSNSRPN 55
Query: 247 ------------------------TRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKV 282
T+ + +P+ F+L N K G + H+G+ EF ADEG+V
Sbjct: 56 NVAFDPFNPYSLAAARIEQSQWRDTQQQLPHPLTFRLVNSKNGNVVHAGIREFSADEGEV 115
Query: 283 YLPYWMMRNL----------------------------------------------LLDE 296
L +++ L ++E
Sbjct: 116 VLSPFLLEALGISAPTRKSTPSPKVESERGSPSAPIDLTDNPSIDLTRDETIDLTDEIEE 175
Query: 297 GELVNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI-N 351
+ + + L T+ + +P + NP K++LE LR NF LT+G+++ +
Sbjct: 176 SAQITVHAKQLSKGTYVRLRPLEAGY----NPEDWKSLLERHLRENFTTLTNGEILTVRG 231
Query: 352 YNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
S+ + + + P G+ + +++ D+ VD
Sbjct: 232 SKSEEFRFLIDKLAPEGDGICVVDTDLEVDI 262
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 50/122 (40%)
Query: 3 PDIPRPFNRSYKCFSVSM--FPGNEREDVERGGKIIMPPSALEQL--------------- 45
PDI ++ YK S PG+ KI++P SALEQL
Sbjct: 5 PDISLKWSSVYKVASKDSISLPGD---------KILLPQSALEQLLAASTVTVNSNSRPN 55
Query: 46 ------------------------TRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKV 81
T+ + +P+ F+L N K G + H+G+ EF ADEG+V
Sbjct: 56 NVAFDPFNPYSLAAARIEQSQWRDTQQQLPHPLTFRLVNSKNGNVVHAGIREFSADEGEV 115
Query: 82 YL 83
L
Sbjct: 116 VL 117
>gi|325092225|gb|EGC45535.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H88]
Length = 743
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 72/220 (32%)
Query: 233 GGKIIMPPSALEQL-----------------------------------------TRLNI 251
G KI++PPSALEQL + +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GE------- 298
P+ F+L N GR+ H+G+ EF A E +V L ++ ++L LD+ GE
Sbjct: 89 PNPLTFRLVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEDSSSDVD 148
Query: 299 --------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
LV I + LP ++ + +P + D + KA+LE LR NF LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 344 SGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
G+++ I ++ + V + +P G+ + I++ D+ VD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|171678090|ref|XP_001903995.1| hypothetical protein [Podospora anserina S mat+]
gi|170937114|emb|CAP61772.1| unnamed protein product [Podospora anserina S mat+]
Length = 775
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 76/223 (34%)
Query: 232 RGGKIIMPPSALEQL---------------------------------------TRLNIC 252
+G KI++P SALEQL T +
Sbjct: 28 QGDKILLPQSALEQLLARAPSTFTSSTSHTFTAFDPFSPYAVSDARRERAQYRETSQQLP 87
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLD----------EGELVN- 301
+P++F+L NQK G ++G+ EF A+E +V L +++ L + E E+V+
Sbjct: 88 HPLMFQLVNQKNGNSVYAGIREFSANEDEVALSPYLIDALGIQHEDIQQEPTFEDEVVDL 147
Query: 302 --------------IESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLT 343
+++ LP T+ + +P + NP K++LE LR NF LT
Sbjct: 148 TDDEPTKTEELRITVKARQLPKGTYVRLRPLEAGY----NPDDWKSLLERQLRANFTTLT 203
Query: 344 SGDMIAINYNSKIYELCVLETK---PGNAVTIIECDMNVDFAP 383
++++ + K E L K G+ + +++ D+ VD P
Sbjct: 204 KDSILSV-HGVKGEEFRFLVDKFLPEGSGICVVDTDLEVDIEP 245
>gi|258571631|ref|XP_002544619.1| hypothetical protein UREG_04136 [Uncinocarpus reesii 1704]
gi|237904889|gb|EEP79290.1| hypothetical protein UREG_04136 [Uncinocarpus reesii 1704]
Length = 183
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
Query: 359 LCVLETKPGN---AVTIIECDMNVDFAPPVGYTEPEK 392
+ VLETKP N A++++E D+ VDFAPPVGY EP++
Sbjct: 1 MAVLETKPENPEKAISVLETDLEVDFAPPVGYEEPKR 37
>gi|225555075|gb|EEH03368.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 810
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 72/220 (32%)
Query: 233 GGKIIMPPSALEQL-----------------------------------------TRLNI 251
G KI++PPSALEQL + +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GE------- 298
P+ F++ N GR+ H+G+ EF A E +V L ++ ++L LD+ GE
Sbjct: 89 PNPLTFRIVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSTGEDSSSDVD 148
Query: 299 --------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
LV I + LP ++ + +P + D + KA+LE LR NF LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 344 SGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
G+++ I ++ + V + +P G+ + I++ D+ VD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|154273046|ref|XP_001537375.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415887|gb|EDN11231.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 810
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 72/220 (32%)
Query: 233 GGKIIMPPSALEQL-----------------------------------------TRLNI 251
G KI++PPSALEQL + +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GE------- 298
P+ F++ N GR+ H+G+ EF A E +V L ++ ++L LD+ GE
Sbjct: 89 PNPLTFRIVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEESSSDVD 148
Query: 299 --------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
LV I + LP ++ + +P + D + KA+LE LR NF LT
Sbjct: 149 MPESGKVSNMSKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 344 SGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
G+++ I + + V + +P G+ + I++ D+ VD
Sbjct: 208 LGELLLIPGPRDETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|346975076|gb|EGY18528.1| hypothetical protein VDAG_09054 [Verticillium dahliae VdLs.17]
Length = 722
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 65/211 (30%)
Query: 232 RGGKIIMPPSALEQLTRLN---------------------------------ICYPMLFK 258
RG KI++P SALE L + + P+ F+
Sbjct: 33 RGDKILLPQSALEHLLAASRSPSHPNQTFSSSRDPFNPYATHQSGPYHETSQLPNPLTFR 92
Query: 259 LTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------------- 299
L N G H+G+ EF A+EG+V L ++M L +D
Sbjct: 93 LVNPINGNAVHAGIREFSAEEGQVALGPYLMEALGIDSSMFASESDIDSDAHATSDQSKA 152
Query: 300 ---VNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIAI-N 351
+ I + LP T+ + +P + NP K++LE LR +F LT ++A+
Sbjct: 153 YPRITIHAKHLPKGTYVRLRPLEAGY----NPDDWKSLLERQLRQSFTTLTKDAVLAVRG 208
Query: 352 YNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ ++ + + P G+ + +++ D+ VD
Sbjct: 209 VKGEQFQFLIDKFSPEGDGICVVDTDLEVDI 239
>gi|451996704|gb|EMD89170.1| hypothetical protein COCHEDRAFT_1180487 [Cochliobolus
heterostrophus C5]
Length = 792
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 85/235 (36%)
Query: 233 GGKIIMPPSALEQLTRL---------------------------------------NICY 253
G K+++PPSALEQL + +
Sbjct: 30 GDKVLLPPSALEQLLAAAPVVHVDANQPHLTAFDPFNPYTFNAERYARAQAQDRFQQLPH 89
Query: 254 PMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL-------------- 299
P+ F+L N GR H+G+ EF A+EG++ L ++ L + E
Sbjct: 90 PLTFRLVNPDNGRAVHAGIREFSAEEGEIVLSSFLKEALGIQERSAEPSRNGSPDGDKDG 149
Query: 300 -----------------------VNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCL 336
+ + + LP F K +P + D + K++LE L
Sbjct: 150 DHTMENGVDKPLGSGSNNDAAIKITVHAKQLPKGAFVKLRPLEAGY-DPEDWKSLLEEHL 208
Query: 337 R-NFACLTSGDMIAINYNSKI------YELCVLETKP-GNAVTIIECDMNVDFAP 383
R N+ LT+G+++ ++ + + + KP G + +++ D+ VD P
Sbjct: 209 RSNYTTLTNGEILVVHGGRGVGGKREEFRFLIDGFKPEGEGICVVDTDLEVDIEP 263
>gi|401404360|ref|XP_003881706.1| YGR048Wp-like protein, related [Neospora caninum Liverpool]
gi|325116119|emb|CBZ51673.1| YGR048Wp-like protein, related [Neospora caninum Liverpool]
Length = 272
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 266 RITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFL-- 323
R VL+F A + ++LP W M+ L L +V + LP+A QP + FL
Sbjct: 129 RRVSVSVLDFAAPKNFIFLPLWAMKTLNLRPFSIVACKWERLPLAAHVTLQPASAAFLRA 188
Query: 324 -DITNP--KAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKP-GNAVTIIE----- 374
TN + VLE +R+++ LT+ +I + + + L V + + G+ E
Sbjct: 189 VKATNQDIQKVLEEEIRHYSSLTANTVIPVKIQGETFWLRVRDIQAEGSGAANSERAEHV 248
Query: 375 CDMNVDFAPPVGYTEPEKVKEKEE 398
C + D A + E E K+K E
Sbjct: 249 CVQDSDVATTLLPAEDEAGKQKTE 272
>gi|85097960|ref|XP_960544.1| hypothetical protein NCU05582 [Neurospora crassa OR74A]
gi|28922037|gb|EAA31308.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 784
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 83/231 (35%)
Query: 232 RGGKIIMPPSALEQL----------------------------------------TRLNI 251
+G KI++P SALEQL T +
Sbjct: 28 QGDKILLPQSALEQLLSASTTISTTPSNSHTFTAFDPYNPYSVAAARRERSNFRETTQQL 87
Query: 252 CYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGEL------------ 299
+P++F+L NQ G +G+ EF A+EG+V L +++ L + E ++
Sbjct: 88 PHPLMFQLINQSNGNSVFAGIREFSANEGEVALSPYLLEALGIHEDDIKDTSPPADTQTD 147
Query: 300 ---------------------VNIESVSLPVATFSKFQPQTCDFLDITNP---KAVLENC 335
+ +++ LP T+ + +P + NP K++LE
Sbjct: 148 GPEVIDLTEDDAINQTTQGYQITVKARQLPKGTYLRLRPLQAGY----NPDDWKSLLERQ 203
Query: 336 LR-NFACLTSGDMIAIN-YNSKIYELCVLETKP-GNAVTIIECDMNVDFAP 383
LR ++ LT ++++ + + V + +P GN + +++ D+ VD P
Sbjct: 204 LRASYTTLTKDSILSVTGVKGEEFRFLVDKFQPEGNGICVVDTDLEVDIEP 254
>gi|255583158|ref|XP_002532345.1| hypothetical protein RCOM_0413810 [Ricinus communis]
gi|223527962|gb|EEF30047.1| hypothetical protein RCOM_0413810 [Ricinus communis]
Length = 253
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 43/123 (34%)
Query: 210 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITH 269
F +Y C+ VS+ GN+ +E G +I MP S L++L L++ +PMLF++ N
Sbjct: 48 FRSTYMCYPVSLI-GNDH--LEHGDQITMPQSVLDRLLDLHVDFPMLFEICNDS------ 98
Query: 270 SGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPK 329
++ +G T+ K QP + DF+ I NPK
Sbjct: 99 ----KYQTGKG------------------------------TYVKLQPHSMDFMGILNPK 124
Query: 330 AVL 332
A L
Sbjct: 125 AAL 127
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 9 FNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 60
F +Y C+ VS+ GN+ +E G +I MP S L++L L++ +PMLF++ N
Sbjct: 48 FRSTYMCYPVSLI-GNDH--LEHGDQITMPQSVLDRLLDLHVDFPMLFEICN 96
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 85 YWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTN 132
Y C+ VS+ GN+ +E G +I MP S L++L L++ +PMLF++ N
Sbjct: 52 YMCYPVSLI-GNDH--LEHGDQITMPQSVLDRLLDLHVDFPMLFEICN 96
>gi|403221492|dbj|BAM39625.1| ubiquitin-fusion degradation pathway component [Theileria
orientalis strain Shintoku]
Length = 330
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 271 GVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKA 330
+EF DE VY+P W+M NL L ++V +E + L T + + +F + + K
Sbjct: 214 SAIEFRTDENYVYVPKWIMNNLKLKPFDVVLVELIKLDDCTNVELKCLEREFYETNDIKK 273
Query: 331 VLENCLRNFACLTSGDMIAI-----NYNSKIYELCVLETKPGNAVTIIECDMNV 379
VLE L+ ++ LT +I I +N K+ L + +I + D+NV
Sbjct: 274 VLEERLKYYSTLTLNSVIPITIGDVTFNFKVVRLDTTNQRNVPFASIQDIDLNV 327
>gi|255074459|ref|XP_002500904.1| predicted protein [Micromonas sp. RCC299]
gi|226516167|gb|ACO62162.1| predicted protein [Micromonas sp. RCC299]
Length = 271
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 307 LPVATFSKFQPQTCDF---LDITNP---KAVLENCLRNFACLTSGDMIAIN-YNSKIYEL 359
LP T+ K QP++ DF L N + +LE L LT GD +++ + + Y L
Sbjct: 59 LPKGTWVKLQPRSADFQGELATDNSVDLRELLEATLHRRCALTVGDDVSVRAHGDREYAL 118
Query: 360 CVLETKPGN---AVTIIECDMNVDFAPPVGYTE 389
V+E P + AV+++E D+ VD AP Y +
Sbjct: 119 RVVEVLPDDADGAVSLVETDVEVDIAPSEDYED 151
>gi|121714281|ref|XP_001274751.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
clavatus NRRL 1]
gi|119402905|gb|EAW13325.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
clavatus NRRL 1]
Length = 792
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 32/160 (20%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGE-------------- 298
+P+ F+L N + GR ++G+ EF A+E ++ L ++ R L +D+ +
Sbjct: 89 HPLTFRLVNPQNGRAIYAGIREFSAEEQQIGLSAFLRRALGIDDDQPSSQTNGQVTESGQ 148
Query: 299 --------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLT 343
+ + + LP T+ + +P + D + KA+LE LR NF LT
Sbjct: 149 SMEVEDAEKADTTVTITVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERHLRDNFTTLT 207
Query: 344 SGDMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+G+++ + +I+ V +P G+ + +++ D+ VD
Sbjct: 208 TGELLTVAGGRDEIFRFLVDRVEPEGDGICVVDTDLEVDI 247
>gi|429328647|gb|AFZ80407.1| hypothetical protein BEWA_032600 [Babesia equi]
Length = 71
Score = 45.1 bits (105), Expect = 0.079, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 55 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVE 102
+F++ N K G+ITH GVLE +++EG +PYW V N+ + VE
Sbjct: 1 MFEIKNPKNGKITHGGVLELISEEGCCNIPYWASHVRCSVLNDLKAVE 48
Score = 44.3 bits (103), Expect = 0.15, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 256 LFKLTNQKMGRITHSGVLEFVADEGKVYLPYW 287
+F++ N K G+ITH GVLE +++EG +PYW
Sbjct: 1 MFEIKNPKNGKITHGGVLELISEEGCCNIPYW 32
>gi|259483706|tpe|CBF79315.1| TPA: ubiquitin fusion degradation protein (Ufd1), putative
(AFU_orthologue; AFUA_4G04640) [Aspergillus nidulans
FGSC A4]
Length = 756
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GELVNIESVS 306
+P+ F+L N + R+ ++G+ EF A E ++ L + L + + +V + +
Sbjct: 89 HPLTFRLVNTQNSRVIYAGIREFSARENEIGLSASLREALDISQEGGDADAPIVTVHAEQ 148
Query: 307 LPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVLET 364
LP T+ + +P + D + KA+LE LR N+ LT+G+ + + + ++ V +
Sbjct: 149 LPKGTYVRLRPLEAGY-DTDDWKALLERHLRSNYTTLTTGETLTVPRGQEESFKFLVDKV 207
Query: 365 KP-GNAVTIIECDMNVDFAPPVGYTEPEKVKE 395
+P G + +++ D+ VD V TE E+ +E
Sbjct: 208 EPQGEGICVVDTDLEVDI---VALTE-EQARE 235
>gi|67541647|ref|XP_664591.1| hypothetical protein AN6987.2 [Aspergillus nidulans FGSC A4]
gi|40742443|gb|EAA61633.1| hypothetical protein AN6987.2 [Aspergillus nidulans FGSC A4]
Length = 1306
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDE------GELVNIESVS 306
+P+ F+L N + R+ ++G+ EF A E ++ L + L + + +V + +
Sbjct: 639 HPLTFRLVNTQNSRVIYAGIREFSARENEIGLSASLREALDISQEGGDADAPIVTVHAEQ 698
Query: 307 LPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGDMIAI-NYNSKIYELCVLET 364
LP T+ + +P + D + KA+LE LR N+ LT+G+ + + + ++ V +
Sbjct: 699 LPKGTYVRLRPLEAGY-DTDDWKALLERHLRSNYTTLTTGETLTVPRGQEESFKFLVDKV 757
Query: 365 KP-GNAVTIIECDMNVDFAPPVGYTEPEKVKE 395
+P G + +++ D+ VD V TE E+ +E
Sbjct: 758 EPQGEGICVVDTDLEVDI---VALTE-EQARE 785
>gi|422293759|gb|EKU21059.1| thermostable carboxypeptidase, partial [Nannochloropsis gaditana
CCMP526]
Length = 515
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 33/114 (28%)
Query: 361 VLETKPGNAVTIIECDMNVDFAPPVGYTEP----------EKVKEKEEDNMIDPVDLMPE 410
VL+ +P A IIE D NVDF PVGY EP + + +
Sbjct: 31 VLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSA 90
Query: 411 PSGFVAFH---------------GTGNRLDGK--------RKKKDTVETGGTPT 441
G+ A H G+G RLDGK K+ D++ T GT +
Sbjct: 91 KGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSS 144
>gi|412985753|emb|CCO16953.1| unknown protein [Bathycoccus prasinos]
Length = 455
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 39/197 (19%)
Query: 232 RGGKIIMPPSALEQLTRLN-----------ICYPMLFKLTNQKMGRITHSGVLEFVADEG 280
R KI +P SAL L R + + + ++ + + L++ A+E
Sbjct: 89 REDKIQLPASALRMLERFDDEMGARQPNAFFYVSRVDEDEDEDEDKGCYCAALDYQAEED 148
Query: 281 KVYLPYWMMRNLLL---DEGELVNIE--SVSLPVATFSKFQPQTCDFLDI------TNPK 329
V +P + + L DE L+ +E S +L + K QP++ +F + K
Sbjct: 149 SVVIPTDLYKRLGYSSGDEKNLLRVEFRSRALEKCEWVKLQPKSNEFSKFLTRHPEADVK 208
Query: 330 AVLENCLRNFACLTSGDMIAIN------------YNSKIYELCVLETKPGNA-----VTI 372
VLEN L +C+ GD+ ++ + ++EL V+ K ++
Sbjct: 209 MVLENVLVQRSCVHVGDVFEVDFSGFVSSSSSPSESKFVFELKVVSLKVEGGEEDIVASL 268
Query: 373 IECDMNVDFAPPVGYTE 389
IE D+ VD AP + + E
Sbjct: 269 IETDVEVDLAPSMEHDE 285
>gi|406864906|gb|EKD17949.1| putative sugar transporter [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 623
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 196 FQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLN-ICYP 254
FQ+ +FP I R S+ + F G R ++ P A LN I +
Sbjct: 493 FQYSAEVFPTIQREQGMSWAVCINNTFAGILSLTFPRMKTVMTPTGAFGFYAGLNLIAWA 552
Query: 255 MLF-------KLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLL 293
++F +LT +++ ++ EF+A E KV+LP+W R +L
Sbjct: 553 LIFCFVRETKQLTLEEIDQVFSVPTREFLAYETKVWLPWWFRRTVL 598
>gi|425777742|gb|EKV15898.1| Ubiquitin fusion degradation protein (Ufd1), putative [Penicillium
digitatum PHI26]
gi|425782671|gb|EKV20568.1| Ubiquitin fusion degradation protein (Ufd1), putative [Penicillium
digitatum Pd1]
Length = 764
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 30/158 (18%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL-------LLDEGE------- 298
+P++F++ N GR ++G+ EF A+E +V L + ++L L ++GE
Sbjct: 86 HPLIFRIVNPLNGRFVYAGIREFSAEENEVALSTLLRKSLDIKDEEFLSEKGEPEGLAAS 145
Query: 299 ------------LVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSG 345
V + + LP T+ + +P + D + KA+LE LR NF LT+G
Sbjct: 146 QIERELSPRTGPTVTVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERYLRDNFTTLTTG 204
Query: 346 DMIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+++ + S+ + V + P G + +++ D+ VD
Sbjct: 205 ELLTVPGTRSESFRFLVDKVFPEGEGICVVDTDLEVDI 242
>gi|385301839|gb|EIF46001.1| ubiquitin fusion degradation protein [Dekkera bruxellensis
AWRI1499]
Length = 356
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 31/159 (19%)
Query: 235 KIIMPPSALEQLTR----LNIC---YPMLFKLT---NQKMGRITHSGVLEFVADEGKVYL 284
K+++P + L QL LNI +P++F+L+ NQ ++GV EF++ EG++ L
Sbjct: 35 KVLLPETVLXQLLNXQKXLNIKXLPHPLIFRLSTPSNQ-----CYAGVREFISSEGEIEL 89
Query: 285 PYWMMRNL-LLDEG-------ELVN-IESVSLPVATFSKFQPQTCDFLDITNPKAVLENC 335
P + L +L + +LVN ++S V T Q F + K LE
Sbjct: 90 PGJLADKLGILQDAMSTPVIVQLVNEVKSAKTLVLTPEMVYSQ---FTSDQDWKWFLEAK 146
Query: 336 LRN-FACLTSGDMIAINYNS---KIYELCVLETKPGNAV 370
L + + LT GD + I +S +IY+L V +T PG V
Sbjct: 147 LTSLYTTLTQGDXLIIKDDSASLQIYKLKVSKTSPGRTV 185
>gi|358385791|gb|EHK23387.1| hypothetical protein TRIVIDRAFT_147517 [Trichoderma virens Gv29-8]
Length = 760
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 69/214 (32%)
Query: 233 GGKIIMPPSALEQLTRLN--------------------------------ICYPMLFKLT 260
G KII+PPSAL+QL + + P++F+L
Sbjct: 28 GDKIILPPSALQQLLSASSSRAATGSANGSNGYFGSSYLSSQSYGQETQQLPNPLIFRLV 87
Query: 261 NQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVN------------------- 301
N K + ++G+ EF A EG + L ++ L +D + V
Sbjct: 88 NPKNHNVVYAGIREFSAPEGTIGLSSLLLEALAIDSDDYVQTTPDVIDIEDPESLESKNA 147
Query: 302 --------IESVSLPVATFSKFQPQTCDFLDITNP---KAVLENCLR-NFACLTSGDMIA 349
+ +V L T+ + +P + NP K +LE LR NF LT +I
Sbjct: 148 ASGSSRITVHAVELQKGTYVRLRPLEAGY----NPDDWKPLLERQLRQNFTTLTKNTVIP 203
Query: 350 IN-YNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
+ + ++L V + P G+ + +I+ D+ VD
Sbjct: 204 VQGSQGEHFKLLVDKFAPDGDGICVIDTDLEVDI 237
>gi|255935971|ref|XP_002559012.1| Pc13g05780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583632|emb|CAP91647.1| Pc13g05780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 765
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 29/157 (18%)
Query: 253 YPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNL-LLDE--------------- 296
+P++F++ N GR ++G+ EF A+E +V L + +L + DE
Sbjct: 86 HPLIFRIVNPLNGRFIYAGIREFSAEENEVALSTLLRDSLDIKDEEFLGENGEPQDPSAQ 145
Query: 297 ---------GELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLR-NFACLTSGD 346
G V + + LP T+ + +P + D + KA+LE LR NF LT+G+
Sbjct: 146 VETEPSPRAGPAVTVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERYLRDNFTTLTTGE 204
Query: 347 MIAI-NYNSKIYELCVLETKP-GNAVTIIECDMNVDF 381
++ + S+ + V + P G + +++ D+ VD
Sbjct: 205 LLTVPGTRSESFRFLVDKVFPEGEGICVVDTDLEVDI 241
>gi|310642890|ref|YP_003947648.1| alpha/beta hydrolase [Paenibacillus polymyxa SC2]
gi|309247840|gb|ADO57407.1| Predicted acetyltransferases and hydrolases with the alpha/beta
hydrolase fold [Paenibacillus polymyxa SC2]
gi|392303712|emb|CCI70075.1| prophage LambdaBa01, acyltransferase, putative [Paenibacillus
polymyxa M1]
Length = 873
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 18 VSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL-------TNQKMGRITHSG 70
V PG + D+ GG P LE + LNIC PM K N RI
Sbjct: 7 VIFIPGIKGSDLWEGGNKRWFPKNLEDVEALNICNPMKAKSPLSVVNGFNIYFKRIYRGI 66
Query: 71 VLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKL 130
+ EF ++E + MFP + R D+ + + +TRLN + + +
Sbjct: 67 LKEFSSEEAE-----------MFPYDWRLDIN-----LTADELVSTITRLNAKHDNIHLV 110
Query: 131 TNQKMGRITHSGVLELDG 148
+ G I +L++DG
Sbjct: 111 AHSMGGMIAKIAILKMDG 128
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,131,878,118
Number of Sequences: 23463169
Number of extensions: 361512594
Number of successful extensions: 614909
Number of sequences better than 100.0: 631
Number of HSP's better than 100.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 611721
Number of HSP's gapped (non-prelim): 2132
length of query: 473
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 327
effective length of database: 8,933,572,693
effective search space: 2921278270611
effective search space used: 2921278270611
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)