Query psy17241
Match_columns 93
No_of_seqs 174 out of 1324
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 16:56:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17241.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17241hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1221|consensus 99.6 8E-16 1.7E-20 110.8 7.2 86 8-93 64-149 (467)
2 PF07993 NAD_binding_4: Male s 99.6 2.3E-16 5.1E-21 105.6 3.7 69 22-90 59-127 (249)
3 PLN02503 fatty acyl-CoA reduct 99.6 2.4E-14 5.2E-19 106.3 9.8 86 7-92 171-261 (605)
4 PLN02996 fatty acyl-CoA reduct 99.5 9.4E-14 2E-18 101.1 9.5 85 8-92 64-154 (491)
5 COG3320 Putative dehydrogenase 99.5 1.7E-13 3.7E-18 96.3 6.6 82 7-88 37-125 (382)
6 PF01073 3Beta_HSD: 3-beta hyd 99.2 5.4E-11 1.2E-15 81.3 6.8 59 24-88 46-106 (280)
7 TIGR01746 Thioester-redct thio 99.1 8.6E-10 1.9E-14 75.9 7.6 67 23-89 61-127 (367)
8 COG1086 Predicted nucleoside-d 99.0 9.4E-10 2E-14 80.9 7.3 81 3-89 281-367 (588)
9 KOG1502|consensus 99.0 2.9E-09 6.3E-14 74.2 7.5 66 20-91 54-121 (327)
10 PF02719 Polysacc_synt_2: Poly 98.9 1.5E-09 3.2E-14 74.8 5.1 81 3-89 29-119 (293)
11 COG1088 RfbB dTDP-D-glucose 4, 98.9 1.3E-09 2.8E-14 75.1 4.3 62 22-89 50-116 (340)
12 PRK15181 Vi polysaccharide bio 98.9 4.7E-09 1E-13 73.2 6.8 61 23-89 69-132 (348)
13 TIGR03443 alpha_am_amid L-amin 98.9 5.6E-09 1.2E-13 83.1 7.9 67 23-89 1034-1100(1389)
14 PRK07201 short chain dehydroge 98.9 6.8E-09 1.5E-13 77.3 7.9 66 23-89 51-116 (657)
15 COG1087 GalE UDP-glucose 4-epi 98.9 5.2E-10 1.1E-14 77.1 1.7 59 25-89 46-109 (329)
16 PLN02662 cinnamyl-alcohol dehy 98.8 3.4E-08 7.4E-13 67.6 7.6 60 23-88 55-116 (322)
17 PLN02986 cinnamyl-alcohol dehy 98.7 5.9E-08 1.3E-12 66.7 7.2 61 23-89 56-118 (322)
18 PLN02650 dihydroflavonol-4-red 98.7 5.2E-08 1.1E-12 67.8 7.0 61 23-89 56-118 (351)
19 PLN00198 anthocyanidin reducta 98.7 9E-08 1.9E-12 66.3 7.4 61 23-89 59-121 (338)
20 PLN02427 UDP-apiose/xylose syn 98.7 9.6E-08 2.1E-12 67.4 7.5 61 23-89 65-128 (386)
21 PRK11908 NAD-dependent epimera 98.7 1.2E-07 2.5E-12 66.0 7.2 62 23-89 46-110 (347)
22 PLN02214 cinnamoyl-CoA reducta 98.7 9.7E-08 2.1E-12 66.6 6.8 59 23-89 60-118 (342)
23 KOG1371|consensus 98.6 6.4E-08 1.4E-12 67.4 4.7 62 22-89 53-119 (343)
24 TIGR01472 gmd GDP-mannose 4,6- 98.6 1.6E-07 3.4E-12 65.3 6.2 61 23-89 55-120 (343)
25 PRK08125 bifunctional UDP-gluc 98.6 2.8E-07 6.2E-12 69.4 7.2 62 23-89 360-424 (660)
26 TIGR03589 PseB UDP-N-acetylglu 98.5 4.9E-07 1.1E-11 62.7 7.4 61 23-89 53-116 (324)
27 PLN02989 cinnamyl-alcohol dehy 98.5 5.4E-07 1.2E-11 62.0 7.6 60 23-88 56-118 (325)
28 PLN02572 UDP-sulfoquinovose sy 98.5 4.6E-07 1E-11 65.5 7.1 60 24-89 114-181 (442)
29 PRK09987 dTDP-4-dehydrorhamnos 98.5 2.9E-07 6.4E-12 63.1 5.7 57 27-89 35-96 (299)
30 PLN02260 probable rhamnose bio 98.5 6.8E-07 1.5E-11 67.3 7.6 63 23-91 57-124 (668)
31 PRK10217 dTDP-glucose 4,6-dehy 98.5 6.9E-07 1.5E-11 62.1 6.6 59 23-87 51-114 (355)
32 TIGR01181 dTDP_gluc_dehyt dTDP 98.4 1.1E-06 2.5E-11 59.5 6.7 60 23-88 50-114 (317)
33 PLN02896 cinnamyl-alcohol dehy 98.4 1.3E-06 2.8E-11 61.0 7.1 61 23-89 58-128 (353)
34 PLN02206 UDP-glucuronate decar 98.4 9.8E-07 2.1E-11 63.9 6.5 56 23-89 167-225 (442)
35 PRK10084 dTDP-glucose 4,6 dehy 98.4 8.4E-07 1.8E-11 61.6 5.9 60 23-88 50-114 (352)
36 PLN02166 dTDP-glucose 4,6-dehy 98.4 1.2E-06 2.7E-11 63.3 6.6 56 23-89 168-226 (436)
37 COG0451 WcaG Nucleoside-diphos 98.4 1.4E-06 2.9E-11 59.1 6.1 58 24-87 43-105 (314)
38 PLN02686 cinnamoyl-CoA reducta 98.4 1.3E-06 2.8E-11 61.7 6.1 61 23-89 107-170 (367)
39 PLN02653 GDP-mannose 4,6-dehyd 98.4 1.5E-06 3.2E-11 60.3 6.2 61 23-89 60-125 (340)
40 PLN02778 3,5-epimerase/4-reduc 98.3 3.3E-06 7.2E-11 58.0 6.7 60 24-89 35-102 (298)
41 CHL00194 ycf39 Ycf39; Provisio 98.2 2.5E-06 5.4E-11 58.9 5.5 59 23-89 43-101 (317)
42 PLN02695 GDP-D-mannose-3',5'-e 98.2 4.6E-06 1E-10 58.9 6.2 59 25-89 66-128 (370)
43 PLN02240 UDP-glucose 4-epimera 98.1 9.9E-06 2.2E-10 56.1 6.8 61 23-89 58-123 (352)
44 TIGR02622 CDP_4_6_dhtase CDP-g 98.1 7.7E-06 1.7E-10 57.0 6.2 60 24-89 53-117 (349)
45 TIGR03466 HpnA hopanoid-associ 98.1 9.1E-06 2E-10 55.5 6.5 60 24-89 44-104 (328)
46 PLN02725 GDP-4-keto-6-deoxyman 98.1 5.9E-06 1.3E-10 56.1 5.4 56 28-89 31-92 (306)
47 PF01370 Epimerase: NAD depend 98.1 6.4E-06 1.4E-10 53.7 5.4 60 24-89 43-107 (236)
48 PLN02583 cinnamoyl-CoA reducta 98.1 1.7E-05 3.8E-10 54.3 7.2 60 23-88 57-117 (297)
49 KOG1430|consensus 98.1 3.8E-06 8.3E-11 59.6 4.0 61 22-89 54-117 (361)
50 PRK10675 UDP-galactose-4-epime 98.0 3E-05 6.4E-10 53.5 7.3 60 24-89 51-115 (338)
51 COG1091 RfbD dTDP-4-dehydrorha 98.0 1.2E-05 2.6E-10 55.4 5.0 54 30-89 34-92 (281)
52 PLN02260 probable rhamnose bio 98.0 2.3E-05 4.9E-10 59.1 6.4 59 25-89 407-473 (668)
53 TIGR02197 heptose_epim ADP-L-g 98.0 2.3E-05 5E-10 53.3 5.6 57 27-89 45-106 (314)
54 PRK05865 hypothetical protein; 97.9 2.9E-05 6.2E-10 60.4 6.5 55 23-89 40-94 (854)
55 KOG0747|consensus 97.9 4E-06 8.6E-11 57.9 0.9 68 21-92 55-125 (331)
56 PLN02657 3,8-divinyl protochlo 97.9 3.1E-05 6.7E-10 55.2 5.0 59 23-89 111-173 (390)
57 TIGR01214 rmlD dTDP-4-dehydror 97.8 6.1E-05 1.3E-09 50.8 5.7 55 29-89 33-92 (287)
58 PLN03209 translocon at the inn 97.8 9E-05 2E-09 55.5 7.0 61 23-89 138-199 (576)
59 PRK12320 hypothetical protein; 97.8 6.8E-05 1.5E-09 57.3 6.3 55 23-89 40-94 (699)
60 COG1089 Gmd GDP-D-mannose dehy 97.8 1E-05 2.2E-10 56.1 1.6 62 22-89 54-120 (345)
61 PF04321 RmlD_sub_bind: RmlD s 97.8 4.5E-05 9.6E-10 52.3 4.4 48 42-89 41-93 (286)
62 PRK11150 rfaD ADP-L-glycero-D- 97.8 5.6E-05 1.2E-09 51.6 4.8 40 50-89 68-108 (308)
63 TIGR01179 galE UDP-glucose-4-e 97.7 0.0001 2.2E-09 50.1 6.0 60 24-89 48-112 (328)
64 PRK06940 short chain dehydroge 97.7 0.00013 2.9E-09 49.3 6.5 59 23-87 49-113 (275)
65 PRK09135 pteridine reductase; 97.7 0.00017 3.8E-09 47.3 6.7 59 23-87 57-129 (249)
66 PLN02253 xanthoxin dehydrogena 97.7 0.00022 4.9E-09 48.0 7.0 59 23-87 66-140 (280)
67 PRK06482 short chain dehydroge 97.7 0.00021 4.5E-09 48.0 6.8 62 23-86 48-119 (276)
68 PRK12745 3-ketoacyl-(acyl-carr 97.6 0.00034 7.4E-09 46.3 6.5 63 23-87 52-126 (256)
69 PRK12746 short chain dehydroge 97.5 0.0006 1.3E-08 45.1 7.1 63 23-87 56-134 (254)
70 TIGR01777 yfcH conserved hypot 97.5 0.00019 4.2E-09 48.2 4.6 45 45-89 52-101 (292)
71 PRK07774 short chain dehydroge 97.5 0.00074 1.6E-08 44.5 7.1 59 23-87 55-130 (250)
72 PRK12935 acetoacetyl-CoA reduc 97.5 0.00054 1.2E-08 45.1 6.4 59 23-87 56-128 (247)
73 PRK09134 short chain dehydroge 97.5 0.00067 1.4E-08 45.2 6.8 59 23-87 59-131 (258)
74 PRK06194 hypothetical protein; 97.5 0.00057 1.2E-08 46.1 6.3 57 23-85 55-125 (287)
75 PRK05717 oxidoreductase; Valid 97.4 0.00063 1.4E-08 45.2 6.3 63 23-87 56-130 (255)
76 KOG1429|consensus 97.4 2.2E-05 4.9E-10 54.4 -0.9 57 22-89 74-133 (350)
77 PRK13394 3-hydroxybutyrate deh 97.4 0.00092 2E-08 44.3 6.8 57 23-85 56-130 (262)
78 PRK12827 short chain dehydroge 97.4 0.0021 4.6E-08 42.1 8.4 62 23-86 59-130 (249)
79 PRK08213 gluconate 5-dehydroge 97.4 0.0013 2.8E-08 43.8 7.2 63 23-87 61-133 (259)
80 PRK06123 short chain dehydroge 97.4 0.0014 3E-08 43.1 7.2 59 23-87 52-125 (248)
81 PRK12826 3-ketoacyl-(acyl-carr 97.4 0.0014 2.9E-08 43.1 7.1 58 23-86 55-126 (251)
82 PRK06180 short chain dehydroge 97.3 0.0013 2.9E-08 44.3 7.2 58 23-86 50-121 (277)
83 PRK08267 short chain dehydroge 97.3 0.00096 2.1E-08 44.4 6.4 63 23-87 48-121 (260)
84 PRK07453 protochlorophyllide o 97.3 0.0009 2E-08 46.2 6.3 59 23-87 55-128 (322)
85 PRK08278 short chain dehydroge 97.3 0.0013 2.8E-08 44.4 6.9 59 23-87 62-134 (273)
86 PRK06128 oxidoreductase; Provi 97.3 0.0014 3.1E-08 44.8 7.1 63 23-87 106-179 (300)
87 PRK07326 short chain dehydroge 97.3 0.0014 3E-08 42.8 6.6 59 23-87 54-126 (237)
88 PRK07067 sorbitol dehydrogenas 97.3 0.0015 3.3E-08 43.3 6.9 59 23-87 52-124 (257)
89 PRK06500 short chain dehydroge 97.3 0.0017 3.7E-08 42.7 7.0 63 23-87 52-124 (249)
90 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0016 3.5E-08 42.7 6.8 59 23-87 56-128 (239)
91 PRK12937 short chain dehydroge 97.3 0.0015 3.2E-08 42.8 6.6 59 23-87 55-127 (245)
92 PRK06179 short chain dehydroge 97.3 0.001 2.3E-08 44.4 6.0 58 23-86 45-116 (270)
93 PRK06181 short chain dehydroge 97.3 0.002 4.4E-08 42.8 7.3 59 23-87 50-123 (263)
94 PRK06398 aldose dehydrogenase; 97.3 0.0018 3.8E-08 43.3 7.0 62 24-87 45-116 (258)
95 PRK12367 short chain dehydroge 97.3 0.0017 3.7E-08 43.5 6.9 56 26-87 61-120 (245)
96 PRK08643 acetoin reductase; Va 97.3 0.0021 4.6E-08 42.5 7.3 63 23-87 51-123 (256)
97 PRK07814 short chain dehydroge 97.2 0.0017 3.8E-08 43.4 6.8 59 23-87 59-131 (263)
98 TIGR01963 PHB_DH 3-hydroxybuty 97.2 0.0026 5.5E-08 41.9 7.5 62 23-86 50-121 (255)
99 PRK07856 short chain dehydroge 97.2 0.0015 3.3E-08 43.3 6.3 59 23-87 47-119 (252)
100 PRK06138 short chain dehydroge 97.2 0.0024 5.3E-08 42.0 7.1 58 23-86 53-124 (252)
101 PRK06182 short chain dehydroge 97.2 0.0019 4.2E-08 43.3 6.6 56 24-85 47-116 (273)
102 PRK08220 2,3-dihydroxybenzoate 97.2 0.0021 4.5E-08 42.4 6.6 59 23-87 48-120 (252)
103 PRK08263 short chain dehydroge 97.2 0.0018 3.8E-08 43.6 6.2 58 23-86 49-120 (275)
104 PRK12939 short chain dehydroge 97.2 0.0036 7.8E-08 41.1 7.6 59 23-87 56-128 (250)
105 PRK05565 fabG 3-ketoacyl-(acyl 97.2 0.003 6.4E-08 41.3 7.1 59 23-87 55-127 (247)
106 PRK07523 gluconate 5-dehydroge 97.2 0.0023 5E-08 42.4 6.6 59 23-87 59-131 (255)
107 PRK12936 3-ketoacyl-(acyl-carr 97.2 0.0029 6.2E-08 41.4 7.0 58 23-86 52-123 (245)
108 PRK08264 short chain dehydroge 97.2 0.0033 7.2E-08 41.1 7.3 58 23-86 49-117 (238)
109 TIGR03206 benzo_BadH 2-hydroxy 97.1 0.0033 7E-08 41.4 7.2 58 23-86 52-123 (250)
110 PRK09072 short chain dehydroge 97.1 0.0024 5.2E-08 42.6 6.5 60 22-87 52-124 (263)
111 PRK06935 2-deoxy-D-gluconate 3 97.1 0.0028 6.1E-08 42.1 6.8 59 23-87 63-135 (258)
112 PRK12825 fabG 3-ketoacyl-(acyl 97.1 0.0026 5.6E-08 41.5 6.5 58 23-86 56-127 (249)
113 PRK08993 2-deoxy-D-gluconate 3 97.1 0.0028 6.1E-08 42.1 6.7 59 23-87 57-129 (253)
114 PRK12829 short chain dehydroge 97.1 0.0034 7.3E-08 41.6 7.1 57 24-86 59-130 (264)
115 PRK05693 short chain dehydroge 97.1 0.0031 6.8E-08 42.3 6.9 58 24-87 45-116 (274)
116 PRK12748 3-ketoacyl-(acyl-carr 97.1 0.0031 6.7E-08 41.9 6.8 63 23-87 67-139 (256)
117 TIGR01830 3oxo_ACP_reduc 3-oxo 97.1 0.0024 5.2E-08 41.6 6.1 59 23-87 48-120 (239)
118 PRK05557 fabG 3-ketoacyl-(acyl 97.1 0.0042 9.2E-08 40.5 7.3 59 23-87 55-127 (248)
119 PRK07890 short chain dehydroge 97.1 0.0027 5.9E-08 42.0 6.4 59 23-87 54-127 (258)
120 PF13460 NAD_binding_10: NADH( 97.1 0.0036 7.8E-08 39.5 6.7 52 22-89 38-89 (183)
121 PRK07424 bifunctional sterol d 97.1 0.0039 8.4E-08 45.1 7.5 58 24-87 225-286 (406)
122 PRK05875 short chain dehydroge 97.1 0.0041 8.8E-08 41.7 7.2 59 23-87 58-131 (276)
123 PRK10538 malonic semialdehyde 97.1 0.004 8.7E-08 41.2 7.1 62 23-86 46-118 (248)
124 PRK12428 3-alpha-hydroxysteroi 97.1 0.00096 2.1E-08 44.2 4.0 56 25-87 25-84 (241)
125 PRK12429 3-hydroxybutyrate deh 97.1 0.0031 6.7E-08 41.6 6.4 58 23-86 53-124 (258)
126 PRK07775 short chain dehydroge 97.0 0.0039 8.6E-08 42.0 7.0 58 23-86 59-130 (274)
127 PRK07792 fabG 3-ketoacyl-(acyl 97.0 0.0029 6.2E-08 43.6 6.4 58 23-86 62-132 (306)
128 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.0033 7.2E-08 41.0 6.4 62 23-86 54-125 (246)
129 smart00822 PKS_KR This enzymat 97.0 0.002 4.3E-08 39.6 5.1 60 23-88 53-126 (180)
130 PRK12743 oxidoreductase; Provi 97.0 0.0053 1.1E-07 40.8 7.4 63 23-87 52-124 (256)
131 PRK08063 enoyl-(acyl carrier p 97.0 0.0052 1.1E-07 40.4 7.2 59 23-87 54-126 (250)
132 PRK09291 short chain dehydroge 97.0 0.0054 1.2E-07 40.5 7.4 58 23-86 51-116 (257)
133 PRK08226 short chain dehydroge 97.0 0.0048 1E-07 41.0 7.1 59 23-87 54-126 (263)
134 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.0025 5.5E-08 41.8 5.7 59 23-87 53-126 (251)
135 PRK08219 short chain dehydroge 97.0 0.0045 9.7E-08 40.1 6.7 56 24-85 48-113 (227)
136 PRK07063 short chain dehydroge 97.0 0.0052 1.1E-07 40.8 7.1 59 23-87 58-130 (260)
137 PRK07060 short chain dehydroge 97.0 0.0036 7.7E-08 41.1 6.2 58 24-87 54-121 (245)
138 PRK06914 short chain dehydroge 97.0 0.0032 6.9E-08 42.3 6.1 61 23-86 54-124 (280)
139 PRK06701 short chain dehydroge 97.0 0.0032 7E-08 43.0 6.1 63 23-87 96-169 (290)
140 PRK07806 short chain dehydroge 97.0 0.00075 1.6E-08 44.5 2.8 59 23-87 56-122 (248)
141 PRK05867 short chain dehydroge 97.0 0.0055 1.2E-07 40.6 7.0 59 23-87 58-130 (253)
142 PRK06197 short chain dehydroge 97.0 0.0032 6.9E-08 43.1 6.0 63 23-87 67-141 (306)
143 PRK05876 short chain dehydroge 96.9 0.0033 7.2E-08 42.6 6.0 58 23-86 55-126 (275)
144 PRK12384 sorbitol-6-phosphate 96.9 0.003 6.5E-08 41.9 5.7 63 23-87 53-125 (259)
145 PRK05866 short chain dehydroge 96.9 0.0066 1.4E-07 41.6 7.5 58 23-86 89-162 (293)
146 PRK06841 short chain dehydroge 96.9 0.0054 1.2E-07 40.5 6.8 59 23-87 61-133 (255)
147 PRK12744 short chain dehydroge 96.9 0.0056 1.2E-07 40.7 6.8 59 23-87 61-133 (257)
148 TIGR02415 23BDH acetoin reduct 96.9 0.0037 8.1E-08 41.2 5.9 59 23-87 49-121 (254)
149 PRK12938 acetyacetyl-CoA reduc 96.9 0.0067 1.5E-07 39.9 7.1 58 23-86 53-124 (246)
150 PRK06198 short chain dehydroge 96.9 0.0062 1.3E-07 40.4 6.9 59 23-87 56-128 (260)
151 PRK06113 7-alpha-hydroxysteroi 96.9 0.0042 9.2E-08 41.2 6.0 58 23-86 60-130 (255)
152 PRK09186 flagellin modificatio 96.9 0.0046 1E-07 40.8 6.0 58 24-87 56-130 (256)
153 PRK07454 short chain dehydroge 96.9 0.0045 9.8E-08 40.6 5.9 62 23-86 55-126 (241)
154 PRK08642 fabG 3-ketoacyl-(acyl 96.9 0.0052 1.1E-07 40.4 6.2 59 23-87 52-131 (253)
155 PRK09009 C factor cell-cell si 96.8 0.0063 1.4E-07 39.8 6.5 62 23-87 43-117 (235)
156 PRK08628 short chain dehydroge 96.8 0.007 1.5E-07 40.1 6.8 59 23-87 55-126 (258)
157 PRK08251 short chain dehydroge 96.8 0.0094 2E-07 39.2 7.3 62 23-86 53-124 (248)
158 PRK06947 glucose-1-dehydrogena 96.8 0.0075 1.6E-07 39.7 6.8 62 23-86 52-124 (248)
159 PRK07478 short chain dehydroge 96.8 0.009 2E-07 39.6 7.1 62 23-86 55-127 (254)
160 PRK08265 short chain dehydroge 96.8 0.0061 1.3E-07 40.7 6.3 59 23-87 52-123 (261)
161 PLN00141 Tic62-NAD(P)-related 96.8 0.0023 4.9E-08 42.7 4.1 61 23-89 62-123 (251)
162 PRK06550 fabG 3-ketoacyl-(acyl 96.8 0.0089 1.9E-07 39.0 6.8 60 23-87 45-112 (235)
163 PRK07577 short chain dehydroge 96.8 0.0083 1.8E-07 39.1 6.7 55 26-86 44-111 (234)
164 PRK07024 short chain dehydroge 96.8 0.0057 1.2E-07 40.7 6.0 56 24-85 51-121 (257)
165 PRK06463 fabG 3-ketoacyl-(acyl 96.8 0.008 1.7E-07 39.9 6.7 56 24-85 52-121 (255)
166 PRK07677 short chain dehydroge 96.8 0.0066 1.4E-07 40.2 6.3 63 23-87 50-122 (252)
167 TIGR01829 AcAcCoA_reduct aceto 96.8 0.0088 1.9E-07 39.0 6.8 62 23-86 50-121 (242)
168 PRK07102 short chain dehydroge 96.8 0.0069 1.5E-07 39.9 6.3 63 23-87 51-120 (243)
169 TIGR01832 kduD 2-deoxy-D-gluco 96.8 0.0078 1.7E-07 39.6 6.5 63 23-87 52-124 (248)
170 PRK08085 gluconate 5-dehydroge 96.7 0.0088 1.9E-07 39.6 6.7 59 23-87 58-130 (254)
171 PRK07097 gluconate 5-dehydroge 96.7 0.0084 1.8E-07 40.1 6.6 59 23-87 59-131 (265)
172 PRK06114 short chain dehydroge 96.7 0.0055 1.2E-07 40.7 5.6 58 23-86 58-129 (254)
173 PRK12481 2-deoxy-D-gluconate 3 96.7 0.0057 1.2E-07 40.7 5.6 59 23-87 55-127 (251)
174 PRK07576 short chain dehydroge 96.7 0.0081 1.8E-07 40.3 6.4 59 23-87 58-130 (264)
175 PRK08277 D-mannonate oxidoredu 96.7 0.01 2.2E-07 39.8 6.9 62 23-86 59-145 (278)
176 PRK05993 short chain dehydroge 96.7 0.007 1.5E-07 40.8 6.1 63 24-88 48-125 (277)
177 PRK06523 short chain dehydroge 96.7 0.0074 1.6E-07 40.0 6.1 62 23-86 49-122 (260)
178 PRK07578 short chain dehydroge 96.7 0.011 2.3E-07 37.9 6.7 55 27-87 35-99 (199)
179 PRK06171 sorbitol-6-phosphate 96.7 0.0058 1.3E-07 40.7 5.5 59 23-87 49-130 (266)
180 PRK07041 short chain dehydroge 96.7 0.011 2.5E-07 38.4 6.8 58 23-86 45-112 (230)
181 PRK06077 fabG 3-ketoacyl-(acyl 96.7 0.01 2.2E-07 39.1 6.6 58 24-87 57-128 (252)
182 PRK06139 short chain dehydroge 96.7 0.017 3.6E-07 40.5 7.9 58 23-86 56-127 (330)
183 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.0084 1.8E-07 43.3 6.6 62 25-88 258-329 (450)
184 PRK05855 short chain dehydroge 96.7 0.0076 1.7E-07 44.1 6.4 58 23-86 364-435 (582)
185 PRK07831 short chain dehydroge 96.6 0.014 3.1E-07 38.9 7.2 59 23-87 69-141 (262)
186 PRK06196 oxidoreductase; Provi 96.6 0.0098 2.1E-07 41.0 6.4 57 24-86 72-140 (315)
187 PRK06949 short chain dehydroge 96.6 0.011 2.3E-07 39.1 6.4 58 23-86 58-129 (258)
188 PF00106 adh_short: short chai 96.6 0.013 2.9E-07 36.2 6.3 59 23-87 52-124 (167)
189 PRK07074 short chain dehydroge 96.6 0.013 2.7E-07 38.9 6.6 58 23-86 49-120 (257)
190 PRK12824 acetoacetyl-CoA reduc 96.6 0.013 2.9E-07 38.2 6.6 62 22-85 51-122 (245)
191 PRK05650 short chain dehydroge 96.6 0.014 3E-07 39.1 6.8 57 23-85 49-119 (270)
192 PRK07985 oxidoreductase; Provi 96.6 0.011 2.3E-07 40.5 6.3 63 23-87 100-173 (294)
193 KOG1205|consensus 96.5 0.022 4.8E-07 39.5 7.6 62 24-87 64-135 (282)
194 PRK06953 short chain dehydroge 96.5 0.013 2.7E-07 38.2 6.2 58 24-87 45-116 (222)
195 PRK07109 short chain dehydroge 96.5 0.019 4E-07 40.2 7.3 58 23-86 57-128 (334)
196 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.0045 9.7E-08 41.3 4.0 63 23-87 51-128 (262)
197 PRK09242 tropinone reductase; 96.5 0.013 2.9E-07 38.8 6.2 62 23-86 60-131 (257)
198 PRK06172 short chain dehydroge 96.5 0.012 2.5E-07 38.9 6.0 58 23-86 56-128 (253)
199 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.0061 1.3E-07 40.6 4.6 63 23-87 52-129 (263)
200 PRK06124 gluconate 5-dehydroge 96.5 0.015 3.2E-07 38.5 6.4 59 23-87 60-132 (256)
201 PRK08703 short chain dehydroge 96.5 0.02 4.3E-07 37.6 6.8 60 24-87 57-132 (239)
202 PRK05884 short chain dehydroge 96.4 0.017 3.7E-07 37.9 6.4 58 24-87 45-118 (223)
203 PRK05872 short chain dehydroge 96.4 0.026 5.7E-07 38.6 7.4 59 23-87 57-129 (296)
204 PRK12823 benD 1,6-dihydroxycyc 96.4 0.022 4.9E-07 37.7 7.0 62 23-86 56-128 (260)
205 PRK07832 short chain dehydroge 96.4 0.015 3.4E-07 39.0 6.1 60 25-86 52-121 (272)
206 PRK12828 short chain dehydroge 96.4 0.018 3.9E-07 37.3 6.3 58 24-87 55-126 (239)
207 PRK08945 putative oxoacyl-(acy 96.4 0.026 5.6E-07 37.2 7.0 60 23-86 62-136 (247)
208 PRK09730 putative NAD(P)-bindi 96.4 0.01 2.2E-07 38.9 5.1 59 23-87 51-124 (247)
209 PRK05854 short chain dehydroge 96.4 0.012 2.5E-07 40.7 5.5 58 23-86 65-135 (313)
210 PRK08936 glucose-1-dehydrogena 96.4 0.025 5.5E-07 37.6 7.0 57 23-85 57-127 (261)
211 PRK08177 short chain dehydroge 96.3 0.0076 1.7E-07 39.3 4.3 58 24-87 46-117 (225)
212 PRK12747 short chain dehydroge 96.3 0.029 6.3E-07 37.1 7.1 63 23-87 54-132 (252)
213 PRK07035 short chain dehydroge 96.3 0.032 6.9E-07 36.8 7.2 62 23-86 57-129 (252)
214 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.02 4.3E-07 37.5 6.1 62 23-86 54-134 (253)
215 PRK08339 short chain dehydroge 96.3 0.034 7.3E-07 37.3 7.3 58 23-86 58-128 (263)
216 PRK06101 short chain dehydroge 96.3 0.026 5.6E-07 37.2 6.6 59 23-87 46-115 (240)
217 PLN00015 protochlorophyllide r 96.3 0.028 6.1E-07 38.7 7.0 62 23-86 47-119 (308)
218 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.022 4.7E-07 37.3 6.1 57 23-85 48-118 (239)
219 TIGR02685 pter_reduc_Leis pter 96.2 0.023 5.1E-07 38.0 6.4 64 23-87 52-139 (267)
220 PRK12742 oxidoreductase; Provi 96.2 0.028 6E-07 36.7 6.5 57 25-87 53-119 (237)
221 PRK08324 short chain dehydroge 96.2 0.028 6E-07 43.0 7.3 59 23-87 470-542 (681)
222 PRK07825 short chain dehydroge 96.2 0.022 4.7E-07 38.2 6.1 61 24-86 51-121 (273)
223 PRK07023 short chain dehydroge 96.2 0.01 2.2E-07 39.0 4.5 59 23-87 45-122 (243)
224 PRK07069 short chain dehydroge 96.2 0.025 5.3E-07 37.2 6.2 58 25-88 53-128 (251)
225 PRK06484 short chain dehydroge 96.2 0.02 4.4E-07 41.9 6.1 63 23-87 315-388 (520)
226 PRK06125 short chain dehydroge 96.1 0.038 8.2E-07 36.7 7.0 58 23-86 57-124 (259)
227 PRK06483 dihydromonapterin red 96.1 0.02 4.3E-07 37.5 5.4 61 25-87 48-118 (236)
228 PRK07791 short chain dehydroge 96.1 0.041 8.8E-07 37.5 7.0 62 23-86 64-135 (286)
229 PRK08589 short chain dehydroge 96.0 0.034 7.3E-07 37.4 6.3 62 23-86 54-126 (272)
230 PRK07201 short chain dehydroge 96.0 0.043 9.3E-07 41.2 7.3 58 23-86 420-493 (657)
231 PRK06057 short chain dehydroge 96.0 0.034 7.4E-07 36.9 6.1 55 26-86 54-124 (255)
232 TIGR01500 sepiapter_red sepiap 95.9 0.031 6.8E-07 37.1 5.7 63 23-87 55-134 (256)
233 PRK06484 short chain dehydroge 95.8 0.042 9.2E-07 40.2 6.5 63 23-87 51-125 (520)
234 COG4221 Short-chain alcohol de 95.8 0.073 1.6E-06 36.2 7.1 62 23-86 53-124 (246)
235 PF08659 KR: KR domain; Inter 95.7 0.066 1.4E-06 34.2 6.5 59 23-87 53-125 (181)
236 TIGR01289 LPOR light-dependent 95.7 0.042 9.2E-07 38.0 5.9 62 23-86 53-125 (314)
237 COG0300 DltE Short-chain dehyd 95.7 0.13 2.8E-06 35.4 8.0 58 23-86 56-127 (265)
238 PRK07062 short chain dehydroge 95.6 0.059 1.3E-06 35.8 6.2 62 23-86 59-130 (265)
239 PRK08159 enoyl-(acyl carrier p 95.5 0.093 2E-06 35.5 6.9 61 25-87 62-136 (272)
240 PRK07533 enoyl-(acyl carrier p 95.5 0.059 1.3E-06 36.0 5.8 61 25-87 62-136 (258)
241 PLN00106 malate dehydrogenase 95.4 0.043 9.2E-07 38.7 5.0 46 44-89 80-126 (323)
242 KOG1372|consensus 95.4 0.0045 9.8E-08 42.7 0.1 61 23-89 83-148 (376)
243 TIGR02632 RhaD_aldol-ADH rhamn 95.3 0.11 2.4E-06 39.8 7.3 57 24-86 466-536 (676)
244 PRK08416 7-alpha-hydroxysteroi 95.2 0.14 3E-06 34.1 6.9 62 23-86 59-136 (260)
245 PRK08415 enoyl-(acyl carrier p 95.2 0.081 1.8E-06 35.9 5.7 60 26-87 58-131 (274)
246 PRK07904 short chain dehydroge 95.1 0.14 3.1E-06 34.1 6.8 62 24-87 61-135 (253)
247 PRK06732 phosphopantothenate-- 95.1 0.034 7.4E-07 37.2 3.7 43 44-87 75-117 (229)
248 PRK06997 enoyl-(acyl carrier p 95.1 0.14 3E-06 34.4 6.6 60 26-87 59-133 (260)
249 PRK12859 3-ketoacyl-(acyl-carr 95.1 0.13 2.9E-06 34.2 6.5 61 23-85 68-138 (256)
250 PRK07889 enoyl-(acyl carrier p 95.0 0.16 3.5E-06 33.9 6.7 61 24-86 58-132 (256)
251 PRK06079 enoyl-(acyl carrier p 95.0 0.11 2.5E-06 34.5 5.9 63 23-87 55-131 (252)
252 PRK06505 enoyl-(acyl carrier p 94.9 0.14 3.1E-06 34.5 6.3 59 26-86 60-132 (271)
253 PRK08017 oxidoreductase; Provi 94.8 0.21 4.5E-06 32.9 6.8 59 24-84 46-115 (256)
254 PRK07370 enoyl-(acyl carrier p 94.6 0.076 1.7E-06 35.5 4.5 61 24-86 60-134 (258)
255 PRK07984 enoyl-(acyl carrier p 94.6 0.22 4.7E-06 33.6 6.6 62 24-87 57-133 (262)
256 PRK08594 enoyl-(acyl carrier p 94.5 0.32 7E-06 32.5 7.3 63 23-87 59-135 (257)
257 PTZ00325 malate dehydrogenase; 94.5 0.14 3E-06 36.1 5.5 45 45-89 71-116 (321)
258 PRK08690 enoyl-(acyl carrier p 94.4 0.3 6.5E-06 32.7 7.0 60 25-86 58-132 (261)
259 TIGR02813 omega_3_PfaA polyket 94.4 0.21 4.5E-06 43.7 7.4 63 23-87 2094-2165(2582)
260 PRK08340 glucose-1-dehydrogena 94.4 0.29 6.2E-06 32.5 6.7 55 24-84 49-119 (259)
261 PF05368 NmrA: NmrA-like famil 94.1 0.14 3E-06 33.6 4.6 51 24-89 44-94 (233)
262 PRK06924 short chain dehydroge 93.9 0.16 3.4E-06 33.4 4.7 58 23-86 48-124 (251)
263 PRK06603 enoyl-(acyl carrier p 93.8 0.44 9.6E-06 31.8 6.9 59 26-86 61-133 (260)
264 KOG2774|consensus 93.6 0.0076 1.6E-07 41.3 -2.0 58 26-89 90-151 (366)
265 cd01336 MDH_cytoplasmic_cytoso 93.5 0.24 5.2E-06 34.8 5.3 46 43-88 71-117 (325)
266 PRK05786 fabG 3-ketoacyl-(acyl 93.5 0.32 7E-06 31.6 5.6 62 24-87 54-123 (238)
267 PLN02780 ketoreductase/ oxidor 93.5 0.45 9.7E-06 33.1 6.6 59 24-86 105-177 (320)
268 PF13561 adh_short_C2: Enoyl-( 93.2 0.55 1.2E-05 30.9 6.4 55 27-87 48-121 (241)
269 PLN00016 RNA-binding protein; 92.6 0.2 4.3E-06 35.5 3.9 46 24-89 111-156 (378)
270 PRK08862 short chain dehydroge 92.6 0.97 2.1E-05 29.8 6.9 62 23-86 54-127 (227)
271 TIGR03649 ergot_EASG ergot alk 92.0 0.45 9.8E-06 32.1 4.9 51 23-89 39-96 (285)
272 KOG4169|consensus 91.9 0.37 8E-06 32.9 4.2 57 22-81 54-113 (261)
273 PRK05599 hypothetical protein; 91.9 1.4 2.9E-05 29.2 7.0 60 24-85 50-119 (246)
274 KOG1201|consensus 91.4 1.1 2.5E-05 31.4 6.4 55 24-84 87-155 (300)
275 PRK08303 short chain dehydroge 91.0 1.4 3E-05 30.5 6.6 62 23-86 67-143 (305)
276 KOG1431|consensus 90.8 0.18 3.8E-06 34.6 1.9 54 30-89 39-98 (315)
277 cd00704 MDH Malate dehydrogena 90.5 1 2.2E-05 31.7 5.6 44 45-88 71-115 (323)
278 PLN02730 enoyl-[acyl-carrier-p 89.2 2.1 4.5E-05 29.8 6.2 39 49-87 119-166 (303)
279 KOG1210|consensus 88.8 1.2 2.7E-05 31.6 4.8 63 23-87 84-156 (331)
280 KOG2865|consensus 88.7 0.77 1.7E-05 32.6 3.8 60 23-89 109-168 (391)
281 PRK09620 hypothetical protein; 88.4 0.47 1E-05 31.8 2.5 21 44-64 79-101 (229)
282 KOG1200|consensus 88.3 1.9 4.1E-05 29.0 5.2 60 26-87 65-134 (256)
283 PF03435 Saccharop_dh: Sacchar 87.8 1.6 3.6E-05 31.0 5.1 35 21-61 44-78 (386)
284 PRK06300 enoyl-(acyl carrier p 87.2 3.2 6.9E-05 28.8 6.1 39 49-87 118-165 (299)
285 KOG1199|consensus 86.2 0.17 3.6E-06 33.4 -0.6 59 22-86 54-132 (260)
286 COG1090 Predicted nucleoside-d 85.6 3.2 7E-05 29.1 5.4 39 50-88 56-99 (297)
287 TIGR01758 MDH_euk_cyt malate d 83.1 3.8 8.2E-05 28.9 5.0 43 46-88 71-114 (324)
288 KOG1610|consensus 83.0 6.6 0.00014 27.9 6.1 58 22-85 75-149 (322)
289 TIGR02114 coaB_strep phosphopa 78.9 3.4 7.5E-05 27.5 3.5 15 49-63 79-93 (227)
290 COG1028 FabG Dehydrogenases wi 78.6 16 0.00034 23.9 6.6 62 23-86 57-130 (251)
291 PF04127 DFP: DNA / pantothena 76.4 2.5 5.4E-05 27.5 2.3 20 45-64 77-96 (185)
292 KOG1208|consensus 75.9 8.1 0.00018 27.2 4.8 64 22-85 85-154 (314)
293 COG0623 FabI Enoyl-[acyl-carri 74.6 25 0.00055 24.2 7.3 79 6-86 40-131 (259)
294 cd02905 Macro_GDAP2_like Macro 73.3 8.3 0.00018 23.9 4.0 43 50-93 68-110 (140)
295 KOG1611|consensus 72.7 7.4 0.00016 26.6 3.8 64 21-85 52-127 (249)
296 PRK05086 malate dehydrogenase; 72.6 13 0.00029 26.0 5.3 46 43-88 62-108 (312)
297 KOG0725|consensus 72.3 12 0.00026 25.6 4.9 66 22-87 59-135 (270)
298 PRK06720 hypothetical protein; 70.7 8.7 0.00019 24.3 3.7 34 23-62 65-105 (169)
299 KOG2733|consensus 66.9 14 0.0003 27.1 4.3 36 21-63 61-96 (423)
300 COG0293 FtsJ 23S rRNA methylas 66.0 37 0.0008 22.7 6.1 36 22-60 84-121 (205)
301 COG1748 LYS9 Saccharopine dehy 63.2 22 0.00048 26.0 4.9 34 22-61 46-79 (389)
302 PF10154 DUF2362: Uncharacteri 60.6 5.9 0.00013 29.9 1.6 41 49-89 386-426 (510)
303 COG0702 Predicted nucleoside-d 59.6 33 0.00072 22.4 5.0 55 23-86 42-96 (275)
304 KOG1209|consensus 59.6 10 0.00023 26.0 2.5 62 23-86 52-124 (289)
305 cd02901 Macro_Poa1p_like Macro 58.3 11 0.00024 22.8 2.4 25 25-62 2-26 (140)
306 smart00506 A1pp Appr-1"-p proc 57.7 15 0.00032 21.7 2.8 23 25-61 2-24 (133)
307 PF00056 Ldh_1_N: lactate/mala 57.3 43 0.00092 20.5 5.0 41 48-88 67-108 (141)
308 PF09015 NgoMIV_restric: NgoMI 56.7 25 0.00054 24.5 4.0 61 21-92 204-267 (278)
309 KOG1494|consensus 55.7 37 0.0008 24.2 4.7 48 41-88 87-135 (345)
310 cd03330 Macro_2 Macro domain, 55.5 16 0.00035 22.0 2.8 23 25-61 2-24 (133)
311 cd02903 Macro_BAL_like Macro d 53.5 17 0.00037 22.2 2.6 24 24-61 2-25 (137)
312 cd02908 Macro_Appr_pase_like M 51.5 16 0.00036 22.9 2.4 24 24-61 1-24 (165)
313 KOG1204|consensus 51.4 39 0.00084 23.3 4.2 38 50-87 82-129 (253)
314 TIGR01759 MalateDH-SF1 malate 49.2 62 0.0013 22.9 5.2 41 48-88 77-118 (323)
315 PHA02099 hypothetical protein 48.6 14 0.00029 20.5 1.4 13 49-61 42-54 (84)
316 cd02906 Macro_1 Macro domain, 47.8 23 0.00049 22.0 2.6 23 24-60 1-23 (147)
317 COG3967 DltE Short-chain dehyd 47.3 74 0.0016 21.7 5.0 63 22-86 49-123 (245)
318 PF08123 DOT1: Histone methyla 46.0 44 0.00094 22.1 3.8 30 21-56 99-128 (205)
319 PRK00431 RNase III inhibitor; 45.6 26 0.00056 22.2 2.7 23 24-60 4-26 (177)
320 COG2110 Predicted phosphatase 44.0 16 0.00035 23.8 1.5 25 23-61 3-27 (179)
321 cd01338 MDH_choloroplast_like 43.7 85 0.0018 22.2 5.2 41 48-88 76-117 (322)
322 cd02907 Macro_Af1521_BAL_like 42.3 59 0.0013 20.5 4.0 39 50-88 73-111 (175)
323 KOG1014|consensus 41.9 47 0.001 23.6 3.6 60 23-84 99-169 (312)
324 KOG3923|consensus 41.7 39 0.00083 24.3 3.2 31 23-62 164-195 (342)
325 cd03331 Macro_Poa1p_like_SNF2 41.7 34 0.00073 21.6 2.7 28 25-61 2-29 (152)
326 PF01661 Macro: Macro domain; 40.9 38 0.00082 19.4 2.7 38 51-88 55-92 (118)
327 KOG1207|consensus 40.3 11 0.00023 25.1 0.3 59 22-86 52-120 (245)
328 COG1744 Med Uncharacterized AB 40.1 33 0.00071 24.5 2.7 37 27-64 198-234 (345)
329 cd02749 Macro Macro domain, a 39.9 79 0.0017 18.9 4.1 39 50-88 72-110 (147)
330 cd05291 HicDH_like L-2-hydroxy 39.0 1.1E+02 0.0025 21.1 5.2 41 48-88 66-107 (306)
331 PRK13656 trans-2-enoyl-CoA red 38.3 47 0.001 24.4 3.3 36 24-61 104-142 (398)
332 cd02904 Macro_H2A_like Macro d 38.1 31 0.00068 22.5 2.2 25 22-60 17-43 (186)
333 PRK04143 hypothetical protein; 36.6 35 0.00075 23.6 2.3 24 23-60 83-106 (264)
334 KOG0532|consensus 36.5 56 0.0012 25.7 3.5 31 55-89 622-652 (722)
335 PF12847 Methyltransf_18: Meth 36.5 77 0.0017 17.7 3.6 29 20-58 49-78 (112)
336 PF02515 CoA_transf_3: CoA-tra 36.3 22 0.00047 22.9 1.3 19 42-60 12-30 (191)
337 KOG2633|consensus 35.1 83 0.0018 21.0 3.8 39 52-92 96-134 (200)
338 COG1692 Calcineurin-like phosp 35.0 1E+02 0.0022 21.4 4.3 47 9-55 17-64 (266)
339 PRK14982 acyl-ACP reductase; P 34.8 39 0.00085 24.2 2.4 20 44-63 209-228 (340)
340 cd01337 MDH_glyoxysomal_mitoch 34.6 1.5E+02 0.0032 20.9 5.2 43 46-88 64-107 (310)
341 PRK00066 ldh L-lactate dehydro 33.3 1.6E+02 0.0034 20.7 5.2 41 48-88 71-112 (315)
342 TIGR01771 L-LDH-NAD L-lactate 32.2 1.7E+02 0.0038 20.3 5.3 41 48-88 62-103 (299)
343 PLN02819 lysine-ketoglutarate 31.1 2.2E+02 0.0047 23.9 6.2 32 24-61 628-659 (1042)
344 PRK05579 bifunctional phosphop 31.1 55 0.0012 23.9 2.7 16 48-63 265-280 (399)
345 TIGR01756 LDH_protist lactate 30.4 2E+02 0.0043 20.3 5.4 43 47-89 57-100 (313)
346 PF13649 Methyltransf_25: Meth 29.2 1E+02 0.0022 17.1 3.2 28 23-59 49-76 (101)
347 PTZ00146 fibrillarin; Provisio 28.3 72 0.0016 22.5 2.8 32 23-60 181-212 (293)
348 KOG1178|consensus 28.1 4.5 9.7E-05 33.1 -3.5 63 24-86 783-845 (1032)
349 PRK05442 malate dehydrogenase; 27.9 2.1E+02 0.0045 20.3 5.1 40 48-87 78-118 (326)
350 cd00300 LDH_like L-lactate deh 27.8 2.1E+02 0.0046 19.8 5.3 41 48-88 64-105 (300)
351 TIGR01772 MDH_euk_gproteo mala 27.4 2.1E+02 0.0047 20.1 5.1 43 46-88 63-106 (312)
352 PF13277 YmdB: YmdB-like prote 26.9 1.7E+02 0.0038 20.2 4.4 44 12-55 17-61 (253)
353 PF06162 DUF976: Caenorhabditi 25.6 48 0.001 21.4 1.4 12 50-61 81-92 (166)
354 PRK04266 fibrillarin; Provisio 25.2 1E+02 0.0022 20.6 3.0 31 23-59 120-150 (226)
355 cd05293 LDH_1 A subgroup of L- 24.6 2.5E+02 0.0055 19.7 5.0 41 48-88 69-110 (312)
356 TIGR00521 coaBC_dfp phosphopan 24.4 78 0.0017 23.1 2.5 40 48-87 263-311 (390)
357 PLN00135 malate dehydrogenase 23.4 2.7E+02 0.0059 19.6 5.2 40 48-87 56-96 (309)
358 COG2910 Putative NADH-flavin r 22.5 98 0.0021 20.7 2.5 32 23-60 41-72 (211)
359 KOG2648|consensus 22.3 3E+02 0.0065 20.8 5.1 45 9-59 67-111 (453)
360 TIGR00282 metallophosphoestera 21.6 2.7E+02 0.0058 19.3 4.6 37 20-56 28-65 (266)
361 PF05724 TPMT: Thiopurine S-me 21.5 1.4E+02 0.003 19.8 3.1 40 22-69 96-135 (218)
362 COG1255 Uncharacterized protei 20.4 87 0.0019 19.3 1.8 27 23-57 51-77 (129)
363 TIGR03253 oxalate_frc formyl-C 20.3 1.8E+02 0.004 21.2 3.8 35 23-60 64-98 (415)
No 1
>KOG1221|consensus
Probab=99.63 E-value=8e-16 Score=110.75 Aligned_cols=86 Identities=37% Similarity=0.586 Sum_probs=81.5
Q ss_pred hHHHHHHHhhCCCCCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 8 NMIFDKLKQEQPGFLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 8 ~~~~d~~~~~~~~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.+|+.+++..|....++..+.||++++++|+++++.+.+.+++++|||+||.+.|.++++....+|+.||++++++|++
T Consensus 64 ~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~ 143 (467)
T KOG1221|consen 64 DPLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKE 143 (467)
T ss_pred hhHHHHHHhhCccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHH
Confidence 58999999998888899999999999999999999999889999999999999999999998889999999999999999
Q ss_pred cCCCCC
Q psy17241 88 FGELET 93 (93)
Q Consensus 88 ~~~l~~ 93 (93)
+.+|++
T Consensus 144 ~~~l~~ 149 (467)
T KOG1221|consen 144 MVKLKA 149 (467)
T ss_pred hhhhhe
Confidence 999974
No 2
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.62 E-value=2.3e-16 Score=105.56 Aligned_cols=69 Identities=39% Similarity=0.553 Sum_probs=53.0
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcCC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFGE 90 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~ 90 (93)
.++++++.||++++.|||+++++..+.+++|+||||||.+++..++++..++||.||.+++++|...++
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~ 127 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKR 127 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS-
T ss_pred hccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccC
Confidence 689999999999999999999999999999999999999999999988889999999999999997654
No 3
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.57 E-value=2.4e-14 Score=106.31 Aligned_cols=86 Identities=21% Similarity=0.342 Sum_probs=74.1
Q ss_pred hhHHHHHHHhhCCC-----CCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHH
Q psy17241 7 ANMIFDKLKQEQPG-----FLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEF 81 (93)
Q Consensus 7 ~~~~~d~~~~~~~~-----~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~l 81 (93)
+..+|+++++..+. ...++.++.||++++.+||+++.++.+.+++|+|||+||.+++..+++..+++|+.||.++
T Consensus 171 ~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nL 250 (605)
T PLN02503 171 DAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHL 250 (605)
T ss_pred hhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHH
Confidence 34567777765542 2578999999999999999999899888899999999999998878888889999999999
Q ss_pred HHHHHhcCCCC
Q psy17241 82 LELATSFGELE 92 (93)
Q Consensus 82 l~~a~~~~~l~ 92 (93)
+++|+++++++
T Consensus 251 LelA~~~~~lk 261 (605)
T PLN02503 251 MSFAKKCKKLK 261 (605)
T ss_pred HHHHHHcCCCC
Confidence 99999987765
No 4
>PLN02996 fatty acyl-CoA reductase
Probab=99.52 E-value=9.4e-14 Score=101.12 Aligned_cols=85 Identities=24% Similarity=0.322 Sum_probs=69.7
Q ss_pred hHHHHHHHhhCCCC-----CCCEEEEeccCCCCCCCCCHHH-HHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHH
Q psy17241 8 NMIFDKLKQEQPGF-----LSKVTIICGDCSKKKLGISDEN-LKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEF 81 (93)
Q Consensus 8 ~~~~d~~~~~~~~~-----~~~v~~v~gDl~~~~~gl~~~~-~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~l 81 (93)
..+|++++...+.. .++++++.||++++++||++.+ ++.+.+++|+|||+||.+++..++...+.+|+.||.++
T Consensus 64 ~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~l 143 (491)
T PLN02996 64 KDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNV 143 (491)
T ss_pred chHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHH
Confidence 44566666544422 2689999999999999998765 57788899999999999998777777889999999999
Q ss_pred HHHHHhcCCCC
Q psy17241 82 LELATSFGELE 92 (93)
Q Consensus 82 l~~a~~~~~l~ 92 (93)
+++|+++++++
T Consensus 144 l~~a~~~~~~k 154 (491)
T PLN02996 144 LNFAKKCVKVK 154 (491)
T ss_pred HHHHHhcCCCC
Confidence 99999876554
No 5
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=1.7e-13 Score=96.33 Aligned_cols=82 Identities=28% Similarity=0.384 Sum_probs=72.8
Q ss_pred hhHHHHHHHhhCC-------CCCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHH
Q psy17241 7 ANMIFDKLKQEQP-------GFLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATK 79 (93)
Q Consensus 7 ~~~~~d~~~~~~~-------~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~ 79 (93)
++....|+++.++ ...++++++.||+..+.+||++..+..+.+++|.|||+||.+++-.||......||.||.
T Consensus 37 ~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~ 116 (382)
T COG3320 37 DEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTA 116 (382)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHH
Confidence 4556677776654 346899999999999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHHhc
Q psy17241 80 EFLELATSF 88 (93)
Q Consensus 80 ~ll~~a~~~ 88 (93)
.+|++|...
T Consensus 117 evlrLa~~g 125 (382)
T COG3320 117 EVLRLAATG 125 (382)
T ss_pred HHHHHHhcC
Confidence 999999864
No 6
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.20 E-value=5.4e-11 Score=81.34 Aligned_cols=59 Identities=32% Similarity=0.276 Sum_probs=50.3
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhh--hHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEA--SLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~--~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
..+++.||++++ +.+.++++++|+|||+||++.... +.+.++++||.||+|||++|++.
T Consensus 46 ~~~~~~~Di~d~------~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~ 106 (280)
T PF01073_consen 46 VKEYIQGDITDP------ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA 106 (280)
T ss_pred ceeEEEeccccH------HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc
Confidence 344999999987 468888999999999999987643 45668999999999999999975
No 7
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.05 E-value=8.6e-10 Score=75.95 Aligned_cols=67 Identities=34% Similarity=0.528 Sum_probs=60.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.||++++.+|++...+..+..++|+|||+||.+++..++.....+|+.|+.+++++|.+.+
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~ 127 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR 127 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC
Confidence 5899999999999999998888888889999999999998777777778899999999999998753
No 8
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.03 E-value=9.4e-10 Score=80.94 Aligned_cols=81 Identities=21% Similarity=0.304 Sum_probs=62.3
Q ss_pred cccchhHHHHHHHhhCCCC-CCCEEEEeccCCCCCCCCCHHHHHHHhcC--cCEEEEcCcccCh---hhhHHHHHHHHHH
Q psy17241 3 IATGANMIFDKLKQEQPGF-LSKVTIICGDCSKKKLGISDENLKLLQTN--VNVIFHTAAIVNF---EASLAQAVLSNVC 76 (93)
Q Consensus 3 ~~~~~~~~~d~~~~~~~~~-~~~v~~v~gDl~~~~~gl~~~~~~~l~~~--vd~V~H~Aa~~~~---~~~~~~~~~~Nv~ 76 (93)
++.+|..+|+......... ..++.++-||+.|. +.+..++++ +|+|||.||+-++ ..++.+.+++||.
T Consensus 281 ~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~------~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~ 354 (588)
T COG1086 281 FSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR------DRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVL 354 (588)
T ss_pred ecCchHHHHHHHHHHHhhCCCcceEEEecccccH------HHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhH
Confidence 4566777777644332211 46899999999986 367788877 9999999998764 4555678899999
Q ss_pred HHHHHHHHHHhcC
Q psy17241 77 ATKEFLELATSFG 89 (93)
Q Consensus 77 gt~~ll~~a~~~~ 89 (93)
||.|++++|.+++
T Consensus 355 GT~nv~~aa~~~~ 367 (588)
T COG1086 355 GTENVAEAAIKNG 367 (588)
T ss_pred hHHHHHHHHHHhC
Confidence 9999999998875
No 9
>KOG1502|consensus
Probab=98.97 E-value=2.9e-09 Score=74.23 Aligned_cols=66 Identities=20% Similarity=0.262 Sum_probs=55.3
Q ss_pred CCCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhh--HHHHHHHHHHHHHHHHHHHHhcCCC
Q psy17241 20 GFLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEAS--LAQAVLSNVCATKEFLELATSFGEL 91 (93)
Q Consensus 20 ~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~l 91 (93)
...+++..+.+|+.+++ .+...+++||.|||.|+++.+... ..+.++..+.||.|+|++|++.+.+
T Consensus 54 ~a~~~l~l~~aDL~d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sV 121 (327)
T KOG1502|consen 54 GAKERLKLFKADLLDEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSV 121 (327)
T ss_pred cCcccceEEeccccccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCc
Confidence 34457999999999985 588889999999999999987443 3468899999999999999987643
No 10
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.94 E-value=1.5e-09 Score=74.82 Aligned_cols=81 Identities=25% Similarity=0.377 Sum_probs=50.4
Q ss_pred cccchhHHHHHHHhh---CCC--CCCCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccCh---hhhHHHHHH
Q psy17241 3 IATGANMIFDKLKQE---QPG--FLSKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNF---EASLAQAVL 72 (93)
Q Consensus 3 ~~~~~~~~~d~~~~~---~~~--~~~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~---~~~~~~~~~ 72 (93)
+|.+|..+|+..++. .+. ....+.++.||++|. +.+..+++ ++|+|||.||+-++ ..++.+.++
T Consensus 29 ~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~------~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~ 102 (293)
T PF02719_consen 29 FDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK------ERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVK 102 (293)
T ss_dssp EES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH------HHHHHHTT--T-SEEEE------HHHHCCCHHHHHH
T ss_pred eCCChhHHHHHHHHHhhcccccCcccccCceeecccCH------HHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHH
Confidence 466777777765543 221 111234578999986 46788887 89999999999875 334456789
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy17241 73 SNVCATKEFLELATSFG 89 (93)
Q Consensus 73 ~Nv~gt~~ll~~a~~~~ 89 (93)
+|+.||.|++++|.+++
T Consensus 103 tNv~GT~nv~~aa~~~~ 119 (293)
T PF02719_consen 103 TNVLGTQNVAEAAIEHG 119 (293)
T ss_dssp HHCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999999864
No 11
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=1.3e-09 Score=75.15 Aligned_cols=62 Identities=23% Similarity=0.298 Sum_probs=52.3
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhhH---HHHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEASL---AQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++..|++||++|.. .+..++. ++|+|+|+||-+++..+. ..++++|+.||.+|||++++..
T Consensus 50 ~~~~~fv~~DI~D~~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~ 116 (340)
T COG1088 50 SPRYRFVQGDICDRE------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW 116 (340)
T ss_pred CCCceEEeccccCHH------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc
Confidence 468999999999963 5666666 689999999999886655 4589999999999999999864
No 12
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.91 E-value=4.7e-09 Score=73.23 Aligned_cols=61 Identities=21% Similarity=0.197 Sum_probs=49.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++.++.||+++. +.+..+++++|+|||+||..+... ....++++|+.||.+++++|++.+
T Consensus 69 ~~~~~~~~Di~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~ 132 (348)
T PRK15181 69 SRFIFIQGDIRKF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH 132 (348)
T ss_pred CceEEEEccCCCH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4688999999985 357777789999999999876432 233478999999999999998763
No 13
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.91 E-value=5.6e-09 Score=83.08 Aligned_cols=67 Identities=33% Similarity=0.473 Sum_probs=60.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.||++++.+|++.+.+..+..++|+|||+||.+++..++......|+.||.+++++|++.+
T Consensus 1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~ 1100 (1389)
T TIGR03443 1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK 1100 (1389)
T ss_pred cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC
Confidence 5799999999999999999889988899999999999999877777766789999999999998753
No 14
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.90 E-value=6.8e-09 Score=77.27 Aligned_cols=66 Identities=27% Similarity=0.438 Sum_probs=57.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|++++.++++...+..+ .++|+||||||..+...+.....++|+.||.+++++|++.+
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~ 116 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ 116 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC
Confidence 5789999999999888877777777 89999999999987766666678999999999999998863
No 15
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.90 E-value=5.2e-10 Score=77.14 Aligned_cols=59 Identities=20% Similarity=0.255 Sum_probs=49.2
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccChhhhHH---HHHHHHHHHHHHHHHHHHhcC
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNFEASLA---QAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..|++||+.|.. .+.+++ .++|.|||+||...+.+|.+ .++..|+.||.+||++|++.+
T Consensus 46 ~~f~~gDi~D~~------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g 109 (329)
T COG1087 46 FKFYEGDLLDRA------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG 109 (329)
T ss_pred CceEEeccccHH------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC
Confidence 689999999964 355554 47899999999998877665 388999999999999999875
No 16
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.79 E-value=3.4e-08 Score=67.60 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=48.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh--hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF--EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++++.+|++++. .+..+++++|+|||+|+.... ..+....+++|+.||.+++++|.+.
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~ 116 (322)
T PLN02662 55 ERLHLFKANLLEEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV 116 (322)
T ss_pred CceEEEeccccCcc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999874 477778899999999998643 2233357899999999999999875
No 17
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.72 E-value=5.9e-08 Score=66.72 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=48.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh--hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF--EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|++++. .+..+++++|+|||+|+.... ..+....+++|+.||.+++++|++.+
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~ 118 (322)
T PLN02986 56 ERLKLFKADLLEES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP 118 (322)
T ss_pred CceEEEecCCCCcc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC
Confidence 47899999999874 577777899999999998643 23333467899999999999998753
No 18
>PLN02650 dihydroflavonol-4-reductase
Probab=98.72 E-value=5.2e-08 Score=67.85 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=48.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh--hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE--ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|++++. .+..++.++|+|||+|+..... .+....+++|+.||.+++++|++.+
T Consensus 56 ~~~~~v~~Dl~d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~ 118 (351)
T PLN02650 56 TRLTLWKADLAVEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK 118 (351)
T ss_pred CceEEEEecCCChh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC
Confidence 36889999999874 4777778999999999976542 2233578999999999999998864
No 19
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.69 E-value=9e-08 Score=66.29 Aligned_cols=61 Identities=15% Similarity=0.281 Sum_probs=48.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh--hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE--ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|++++. .+..+++++|+|||+||..... .+...++++|+.|+.+++++|.+.+
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~ 121 (338)
T PLN00198 59 GDLKIFGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK 121 (338)
T ss_pred CceEEEEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC
Confidence 36889999999863 5677778999999999976532 2333467899999999999998753
No 20
>PLN02427 UDP-apiose/xylose synthase
Probab=98.68 E-value=9.6e-08 Score=67.38 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=48.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|+.+. +.+..++.++|+||||||..+.. ....+.+..|+.|+.+++++|++.+
T Consensus 65 ~~~~~~~~Dl~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~ 128 (386)
T PLN02427 65 GRIQFHRINIKHD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 128 (386)
T ss_pred CCeEEEEcCCCCh------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999986 35777788999999999986542 2223456789999999999998754
No 21
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.66 E-value=1.2e-07 Score=66.01 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=47.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|+.+.. +.+..+.+++|+|||+||..+.. .+....+++|+.||.+++++|++.+
T Consensus 46 ~~~~~~~~Dl~~~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~ 110 (347)
T PRK11908 46 PRMHFFEGDITINK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG 110 (347)
T ss_pred CCeEEEeCCCCCCH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999998421 34666778999999999986542 2334567999999999999998764
No 22
>PLN02214 cinnamoyl-CoA reductase
Probab=98.66 E-value=9.7e-08 Score=66.61 Aligned_cols=59 Identities=22% Similarity=0.210 Sum_probs=48.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|++++. .+..+++++|+|||+|+... ......+++|+.||.+++++|++.+
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~~ 118 (342)
T PLN02214 60 ERLILCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEAK 118 (342)
T ss_pred CcEEEEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 36889999999863 57777889999999999763 2345578999999999999998764
No 23
>KOG1371|consensus
Probab=98.61 E-value=6.4e-08 Score=67.42 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=52.0
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhhHH---HHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEASLA---QAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..++.|+++|++|. +.++++.+ +.|.|+|+|+...+..+++ .++.+|+.||.++|+.|++.+
T Consensus 53 ~~~v~f~~~Dl~D~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDA------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred CCceEEEEeccCCH------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence 46899999999986 35777765 5799999999988766664 378999999999999999876
No 24
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.58 E-value=1.6e-07 Score=65.27 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=46.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhh---HHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEAS---LAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|++|.. .+..++. ++|+|||+||..+...+ ....+++|+.||.+++++|++.+
T Consensus 55 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~ 120 (343)
T TIGR01472 55 ARMKLHYGDLTDSS------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120 (343)
T ss_pred cceeEEEeccCCHH------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 36889999999863 4666665 46999999998764322 23356889999999999998753
No 25
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.55 E-value=2.8e-07 Score=69.38 Aligned_cols=62 Identities=11% Similarity=0.152 Sum_probs=48.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.||++++. ..+..+++++|+|||+||..+.. ......+++|+.||.+++++|++.+
T Consensus 360 ~~~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~ 424 (660)
T PRK08125 360 PRFHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN 424 (660)
T ss_pred CceEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC
Confidence 46899999999853 23456668999999999987643 2234578999999999999999865
No 26
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.53 E-value=4.9e-07 Score=62.68 Aligned_cols=61 Identities=21% Similarity=0.330 Sum_probs=48.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh---hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF---EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++.++.+|++|+ +.+..+++++|+|||+||.... ..+....+++|+.|+.+++++|++.+
T Consensus 53 ~~~~~v~~Dl~d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~ 116 (324)
T TIGR03589 53 PCLRFFIGDVRDK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG 116 (324)
T ss_pred CcEEEEEccCCCH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4688999999986 3577777889999999997643 22334578999999999999998754
No 27
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.53 E-value=5.4e-07 Score=61.96 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=48.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++++.+|++++. .+..+++++|+|||+||..... ......+++|+.|+.+++++|.+.
T Consensus 56 ~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~ 118 (325)
T PLN02989 56 ERLKLFKADLLDEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV 118 (325)
T ss_pred CceEEEeCCCCCch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc
Confidence 46889999999874 5777778899999999976432 233457899999999999999874
No 28
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.51 E-value=4.6e-07 Score=65.53 Aligned_cols=60 Identities=17% Similarity=0.118 Sum_probs=45.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhh------HHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEAS------LAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~------~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.+|++|+. .+..+++ ++|+|||+|+..+...+ ....+++|+.||.+++++|++.+
T Consensus 114 ~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g 181 (442)
T PLN02572 114 EIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA 181 (442)
T ss_pred cceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6889999999863 4666555 58999999987553211 12356899999999999998753
No 29
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.50 E-value=2.9e-07 Score=63.09 Aligned_cols=57 Identities=25% Similarity=0.280 Sum_probs=43.0
Q ss_pred EEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 27 IICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 27 ~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++.+|++|+ +.+.++++ ++|+||||||.++... .....+.+|+.||.+++++|++.+
T Consensus 35 ~~~~Dl~d~------~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g 96 (299)
T PRK09987 35 DYCGDFSNP------EGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG 96 (299)
T ss_pred cccCCCCCH------HHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 446788875 34655555 5899999999987643 234467899999999999998765
No 30
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.48 E-value=6.8e-07 Score=67.26 Aligned_cols=63 Identities=21% Similarity=0.313 Sum_probs=48.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccChhhh---HHHHHHHHHHHHHHHHHHHHhcCCC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNFEAS---LAQAVLSNVCATKEFLELATSFGEL 91 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~l 91 (93)
++++++.+|++++. .+..+. .++|+|||+||..+.... ...++++|+.||.+++++|++.+..
T Consensus 57 ~~v~~~~~Dl~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~v 124 (668)
T PLN02260 57 PNFKFVKGDIASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124 (668)
T ss_pred CCeEEEECCCCChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 47899999999864 244332 589999999999875432 2346799999999999999986543
No 31
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.45 E-value=6.9e-07 Score=62.11 Aligned_cols=59 Identities=20% Similarity=0.231 Sum_probs=46.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+++ ++|+|||+||...... ....++++|+.||.+++++|++
T Consensus 51 ~~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~ 114 (355)
T PRK10217 51 ERFAFEKVDICDRA------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARA 114 (355)
T ss_pred CceEEEECCCcChH------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence 35788999999863 4666555 4899999999876532 3355789999999999999976
No 32
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.41 E-value=1.1e-06 Score=59.51 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=47.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcC--cCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTN--VNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~--vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++++.+|+++++ .+..++++ +|+|||+|+...... ....++++|+.|+.+++++|.+.
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 114 (317)
T TIGR01181 50 PRYRFVKGDIGDRE------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY 114 (317)
T ss_pred CCcEEEEcCCcCHH------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence 36889999999863 56666666 899999999876432 33457899999999999999874
No 33
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.41 E-value=1.3e-06 Score=60.98 Aligned_cols=61 Identities=13% Similarity=0.253 Sum_probs=46.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhh-----hHHH-----HHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEA-----SLAQ-----AVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~-----~~~~-----~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|++++ +.+..++.++|+|||+||..+... +... .++.|+.|+.+++++|++.+
T Consensus 58 ~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~ 128 (353)
T PLN02896 58 DRLRLFRADLQEE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK 128 (353)
T ss_pred CeEEEEECCCCCH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC
Confidence 4688999999986 357777788999999999865321 2222 34556799999999998764
No 34
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.40 E-value=9.8e-07 Score=63.93 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=43.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|+.++. +.++|+||||||..+.. .+....+++|+.||.+|+++|++.+
T Consensus 167 ~~~~~i~~D~~~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g 225 (442)
T PLN02206 167 PNFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 225 (442)
T ss_pred CceEEEECCccChh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46788889987652 24799999999987542 2344578999999999999998865
No 35
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.40 E-value=8.4e-07 Score=61.62 Aligned_cols=60 Identities=18% Similarity=0.271 Sum_probs=46.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
.+++++.+|+++.. .+..++. ++|+|||+||..... ...+..+++|+.||.+++++|++.
T Consensus 50 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 50 ERYVFEHADICDRA------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 35788999999863 4555554 589999999986542 233557899999999999999863
No 36
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.38 E-value=1.2e-06 Score=63.32 Aligned_cols=56 Identities=23% Similarity=0.281 Sum_probs=43.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|+.+.. +.++|+||||||..+.. .+....+++|+.||.+++++|++.+
T Consensus 168 ~~~~~~~~Di~~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g 226 (436)
T PLN02166 168 PRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 226 (436)
T ss_pred CceEEEECcccccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36778888887652 24799999999986542 2334578999999999999998764
No 37
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.4e-06 Score=59.14 Aligned_cols=58 Identities=26% Similarity=0.249 Sum_probs=46.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCc-CEEEEcCcccChhhhH----HHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNV-NVIFHTAAIVNFEASL----AQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~v-d~V~H~Aa~~~~~~~~----~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.+.++.+|+++.. ....+..++ |.|||+|+........ ..++.+|+.||.+++++|++
T Consensus 43 ~~~~~~~d~~~~~------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~ 105 (314)
T COG0451 43 GVEFVVLDLTDRD------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA 105 (314)
T ss_pred ccceeeecccchH------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999863 355666677 9999999998764432 34789999999999999997
No 38
>PLN02686 cinnamoyl-CoA reductase
Probab=98.36 E-value=1.3e-06 Score=61.69 Aligned_cols=61 Identities=13% Similarity=0.134 Sum_probs=47.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++.++.+|++++. .+..+++++|.|||+|+.++... ........|+.||.+++++|++..
T Consensus 107 ~~~~~v~~Dl~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~ 170 (367)
T PLN02686 107 DGIWTVMANLTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE 170 (367)
T ss_pred CceEEEEcCCCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC
Confidence 35889999999863 56777788999999999875432 113456789999999999998753
No 39
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.35 E-value=1.5e-06 Score=60.29 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=46.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|+++.. .+..++. ++|+|||+||..+... .....+++|+.||.+++++|++.+
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~ 125 (340)
T PLN02653 60 ARMKLHYGDLSDAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG 125 (340)
T ss_pred CceEEEEecCCCHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence 45889999999863 4555554 4799999999876432 223457899999999999998764
No 40
>PLN02778 3,5-epimerase/4-reductase
Probab=98.29 E-value=3.3e-06 Score=58.05 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=41.5
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChh------hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFE------ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+....+|+.+.. .+...+. ++|+||||||.++.. .....++.+|+.||.+|+++|++.+
T Consensus 35 ~V~~~~~~~~~~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g 102 (298)
T PLN02778 35 DFHYGSGRLENRA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG 102 (298)
T ss_pred EEEEecCccCCHH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4544556666542 2333333 689999999987521 2334578999999999999998864
No 41
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.25 E-value=2.5e-06 Score=58.86 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=46.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.||+.|+. .+..+++++|+|||+++... .....+.++|+.|+.+++++|++.+
T Consensus 43 ~~v~~v~~Dl~d~~------~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~g 101 (317)
T CHL00194 43 WGAELVYGDLSLPE------TLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAAK 101 (317)
T ss_pred cCCEEEECCCCCHH------HHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHcC
Confidence 36899999999863 57777899999999986432 2223467889999999999998864
No 42
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.20 E-value=4.6e-06 Score=58.93 Aligned_cols=59 Identities=20% Similarity=0.109 Sum_probs=44.1
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh---h-hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF---E-ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~---~-~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++.+|+++. +.+..++.++|+|||+||.++. . ......+..|+.|+.+|+++|++.+
T Consensus 66 ~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~ 128 (370)
T PLN02695 66 HEFHLVDLRVM------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING 128 (370)
T ss_pred ceEEECCCCCH------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC
Confidence 57888999875 3466666789999999997642 1 1223356789999999999998753
No 43
>PLN02240 UDP-glucose 4-epimerase
Probab=98.15 E-value=9.9e-06 Score=56.14 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=46.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|++++. .+..++. ++|+|||+|+..... ......+++|+.|+.+++++|++.+
T Consensus 58 ~~~~~~~~D~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 123 (352)
T PLN02240 58 DNLVFHKVDLRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG 123 (352)
T ss_pred ccceEEecCcCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46889999999863 4555543 689999999976432 2334578999999999999998753
No 44
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.15 E-value=7.7e-06 Score=57.01 Aligned_cols=60 Identities=23% Similarity=0.285 Sum_probs=45.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.+|++++ +.+..+++ ++|+|||+||...... .....+++|+.|+.+++++|++.+
T Consensus 53 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~ 117 (349)
T TIGR02622 53 KIEDHFGDIRDA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG 117 (349)
T ss_pred CceEEEccCCCH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC
Confidence 577899999986 34666655 4699999999754322 233478999999999999998754
No 45
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.15 E-value=9.1e-06 Score=55.49 Aligned_cols=60 Identities=25% Similarity=0.332 Sum_probs=48.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.+|+.++ +.+..+++++|+|||+|+.... .......+++|+.|+.+++++|++.+
T Consensus 44 ~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 104 (328)
T TIGR03466 44 DVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG 104 (328)
T ss_pred CceEEEeeCCCH------HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 688999999986 3577778899999999987643 23345578999999999999998753
No 46
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.14 E-value=5.9e-06 Score=56.06 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=41.1
Q ss_pred EeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccCh----hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 28 ICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNF----EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 28 v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..+|+++. +.+..+++ ++|+||||||..+. ......+++.|+.|+.+++++|++.+
T Consensus 31 ~~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 92 (306)
T PLN02725 31 KELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG 92 (306)
T ss_pred ccCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC
Confidence 45777765 34666544 57999999998642 12334578999999999999998764
No 47
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.13 E-value=6.4e-06 Score=53.72 Aligned_cols=60 Identities=30% Similarity=0.424 Sum_probs=47.6
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCc--CEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNV--NVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~v--d~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.+|+.+. +.+..++++. |.|||+|+..... ......++.|+.++.+++++|.+.+
T Consensus 43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 107 (236)
T PF01370_consen 43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG 107 (236)
T ss_dssp TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeecccc------ccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc
Confidence 789999999975 4577766654 9999999987521 3344578999999999999998765
No 48
>PLN02583 cinnamoyl-CoA reductase
Probab=98.10 E-value=1.7e-05 Score=54.27 Aligned_cols=60 Identities=12% Similarity=-0.012 Sum_probs=47.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
.+++++.+|++++. .+..++.++|.|+|+++.... ....+..+++|+.||.+++++|.+.
T Consensus 57 ~~~~~~~~Dl~d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~ 117 (297)
T PLN02583 57 ERLKVFDVDPLDYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT 117 (297)
T ss_pred CceEEEEecCCCHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 46889999999863 567778899999998876542 2223557899999999999999875
No 49
>KOG1430|consensus
Probab=98.10 E-value=3.8e-06 Score=59.58 Aligned_cols=61 Identities=26% Similarity=0.296 Sum_probs=47.5
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccC--hhh-hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVN--FEA-SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~--~~~-~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..+++++.+|+.+.. .+.....++ .|+||||... +.. ..+..+++||.||.+++++|++.+
T Consensus 54 ~~~v~~~~~D~~~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~ 117 (361)
T KOG1430|consen 54 SGRVTVILGDLLDAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG 117 (361)
T ss_pred CCceeEEecchhhhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC
Confidence 568999999999864 567777888 8888888654 333 245578999999999999999863
No 50
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.03 E-value=3e-05 Score=53.50 Aligned_cols=60 Identities=15% Similarity=0.166 Sum_probs=45.3
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++.++.+|++++. .+..++. ++|+|||+|+..... ....+.+++|+.|+.+++++|++.+
T Consensus 51 ~~~~~~~Dl~d~~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 115 (338)
T PRK10675 51 HPTFVEGDIRNEA------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115 (338)
T ss_pred CceEEEccCCCHH------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4678899999863 4555543 689999999976532 2234578999999999999998764
No 51
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.01 E-value=1.2e-05 Score=55.39 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=41.7
Q ss_pred ccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 30 GDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 30 gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.|+++++ ...+++. .+|+|||+||++.+.. ..+..+.+|..|+.|+.++|++.+
T Consensus 34 ~Ditd~~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g 92 (281)
T COG1091 34 LDITDPD------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG 92 (281)
T ss_pred ccccChH------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC
Confidence 5777764 3555554 5799999999998743 334578999999999999999864
No 52
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.98 E-value=2.3e-05 Score=59.14 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=42.4
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccC---hh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVN---FE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+.+..+|++|+. .+...+. ++|+||||||.++ .. ......+++|+.||.+|+++|++.+
T Consensus 407 v~~~~~~l~d~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g 473 (668)
T PLN02260 407 YEYGKGRLEDRS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG 473 (668)
T ss_pred EEeeccccccHH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC
Confidence 445567777653 3444433 7899999999874 21 2345578999999999999999864
No 53
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.96 E-value=2.3e-05 Score=53.32 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=40.5
Q ss_pred EEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCcccChh-hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 27 IICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIVNFE-ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 27 ~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+.+|+.+.+ .++.+. .++|+|||+|+..+.. ......+++|+.|+.+++++|++.+
T Consensus 45 ~~~~d~~~~~------~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 106 (314)
T TIGR02197 45 VIADYIDKED------FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG 106 (314)
T ss_pred eeeccCcchh------HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4556666543 344443 4799999999976532 2334577899999999999998754
No 54
>PRK05865 hypothetical protein; Provisional
Probab=97.95 E-value=2.9e-05 Score=60.41 Aligned_cols=55 Identities=20% Similarity=0.190 Sum_probs=45.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++.++.+|++++ +.+..+++++|+|||+|+..+. .+++|+.||.+++++|++.+
T Consensus 40 ~~v~~v~gDL~D~------~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~g 94 (854)
T PRK05865 40 SSADFIAADIRDA------TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAETG 94 (854)
T ss_pred cCceEEEeeCCCH------HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHcC
Confidence 3578999999986 3577777899999999987542 35789999999999998764
No 55
>KOG0747|consensus
Probab=97.89 E-value=4e-06 Score=57.90 Aligned_cols=68 Identities=18% Similarity=0.248 Sum_probs=51.4
Q ss_pred CCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHH---HHHHHHHHHHHHHHHHHHhcCCCC
Q psy17241 21 FLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLA---QAVLSNVCATKEFLELATSFGELE 92 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~~l~ 92 (93)
..++.+|+.+|+.+..+ -.......++|.|+|.||.+++..++- .+...|+.+|..|++.++..++++
T Consensus 55 n~p~ykfv~~di~~~~~----~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~ 125 (331)
T KOG0747|consen 55 NSPNYKFVEGDIADADL----VLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIR 125 (331)
T ss_pred cCCCceEeeccccchHH----HHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCee
Confidence 35789999999998532 011122357899999999998765442 356889999999999999998875
No 56
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.86 E-value=3.1e-05 Score=55.25 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=44.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc----CcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT----NVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~----~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|++|++ .+..+++ ++|+||||++..... ..+.+++|+.++.+++++|++.+
T Consensus 111 ~~v~~v~~Dl~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~~--~~~~~~vn~~~~~~ll~aa~~~g 173 (390)
T PLN02657 111 PGAEVVFGDVTDAD------SLRKVLFSEGDPVDVVVSCLASRTGG--VKDSWKIDYQATKNSLDAGREVG 173 (390)
T ss_pred CCceEEEeeCCCHH------HHHHHHHHhCCCCcEEEECCccCCCC--CccchhhHHHHHHHHHHHHHHcC
Confidence 46889999999863 4666555 699999998854321 12356889999999999998763
No 57
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.82 E-value=6.1e-05 Score=50.77 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=40.2
Q ss_pred eccCCCCCCCCCHHHHHHHhcCc--CEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 29 CGDCSKKKLGISDENLKLLQTNV--NVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 29 ~gDl~~~~~gl~~~~~~~l~~~v--d~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+|+.++ +.+..+++++ |+|||+|+..+... .....+.+|+.|+.+++++|++.+
T Consensus 33 ~~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 92 (287)
T TIGR01214 33 QLDLTDP------EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG 92 (287)
T ss_pred ccCCCCH------HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3566654 4566666654 99999999875432 234467999999999999998764
No 58
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.81 E-value=9e-05 Score=55.49 Aligned_cols=61 Identities=20% Similarity=0.171 Sum_probs=47.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh-hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE-ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++.++.+|+.+. +.+...+.++|+|||+|+..... ..+...+.+|+.|+.+++++|++.+
T Consensus 138 ~~v~iV~gDLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag 199 (576)
T PLN03209 138 EKLEIVECDLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK 199 (576)
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 4688999999985 35677778999999999875321 1234467899999999999998753
No 59
>PRK12320 hypothetical protein; Provisional
Probab=97.80 E-value=6.8e-05 Score=57.31 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++++++.+|++++ .+..++.++|+|||+|+.... . ...+|+.|+.|++++|++.+
T Consensus 40 ~~ve~v~~Dl~d~-------~l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~G 94 (699)
T PRK12320 40 PRVDYVCASLRNP-------VLQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARAG 94 (699)
T ss_pred CCceEEEccCCCH-------HHHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHcC
Confidence 4688999999986 255666789999999987432 1 12579999999999998765
No 60
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=1e-05 Score=56.08 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=47.7
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhhHH---HHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEASLA---QAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..++.++.||++|.. .+..+++ ++|.|||+||.+.+..+++ .+.+++..||.+|||+.+-.+
T Consensus 54 ~~~l~l~~gDLtD~~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~ 120 (345)
T COG1089 54 DPRLHLHYGDLTDSS------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG 120 (345)
T ss_pred CceeEEEeccccchH------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC
Confidence 346899999999964 3444444 5699999999987655443 366889999999999998754
No 61
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.76 E-value=4.5e-05 Score=52.30 Aligned_cols=48 Identities=31% Similarity=0.324 Sum_probs=30.6
Q ss_pred HHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 42 ENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 42 ~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+.+..++. .+|+||||||.+++.. ..+..+.+|+.++.+|+++|.+.+
T Consensus 41 ~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~ 93 (286)
T PF04321_consen 41 EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG 93 (286)
T ss_dssp HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC
Confidence 45555544 5899999999998643 445688999999999999998753
No 62
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.75 E-value=5.6e-05 Score=51.64 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=31.3
Q ss_pred CcCEEEEcCcccChh-hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 50 NVNVIFHTAAIVNFE-ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 50 ~vd~V~H~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
++|+|||+||..+.. ......++.|+.||.+|+++|++.+
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~ 108 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE 108 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 689999999965432 1223468999999999999998864
No 63
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.75 E-value=0.0001 Score=50.09 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=45.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhh---hHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEA---SLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.+|+.++. .+..++. ++|+|||+|+...... .....+..|+.|+.+++++|.+.+
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 112 (328)
T TIGR01179 48 RVTFVEGDLRDRE------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG 112 (328)
T ss_pred ceEEEECCCCCHH------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC
Confidence 5778899999863 4555543 6899999999765422 223467899999999999998754
No 64
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00013 Score=49.34 Aligned_cols=59 Identities=24% Similarity=0.178 Sum_probs=45.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh------cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ------TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~------~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. ..+|+|||+|+.......+...+++|+.|+.++++.+..
T Consensus 49 ~~~~~~~~Dv~d~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 113 (275)
T PRK06940 49 FDVSTQEVDVSSRE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK 113 (275)
T ss_pred CeEEEEEeecCCHH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence 36888999999864 233222 368999999998755556677899999999999998864
No 65
>PRK09135 pteridine reductase; Provisional
Probab=97.73 E-value=0.00017 Score=47.28 Aligned_cols=59 Identities=17% Similarity=0.104 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..+.++.+|+++.. .+..+. ..+|+|||+|+.... ...++..+++|+.|+.++++++..
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 57 GSAAALQADLLDPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence 35789999999863 333332 358999999996431 223455789999999999999864
No 66
>PLN02253 xanthoxin dehydrogenase
Probab=97.69 E-value=0.00022 Score=47.98 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=43.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+. .++|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 66 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 139 (280)
T PLN02253 66 PNVCFFHCDVTVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139 (280)
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 46889999999864 343333 368999999997532 12345578999999999998876
Q ss_pred h
Q psy17241 87 S 87 (93)
Q Consensus 87 ~ 87 (93)
.
T Consensus 140 ~ 140 (280)
T PLN02253 140 R 140 (280)
T ss_pred H
Confidence 3
No 67
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00021 Score=48.04 Aligned_cols=62 Identities=11% Similarity=0.199 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...+..+ ..++|+|||+|+.... ...++..+++|+.|+.++++++.
T Consensus 48 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~ 119 (276)
T PRK06482 48 DRLWVLQLDVTDSAA-V-RAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAAL 119 (276)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 478899999998641 1 0111221 2468999999997643 12334578899999999999983
No 68
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.58 E-value=0.00034 Score=46.27 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...++.+ ...+|+|||+|+..+. ...++..+++|+.|+.++++.+..
T Consensus 52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 52 VEVIFFPADVADLSA-H-EAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred CceEEEEecCCCHHH-H-HHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 468899999998641 0 0112222 2468999999997532 133445789999999999988754
No 69
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0006 Score=45.11 Aligned_cols=63 Identities=14% Similarity=0.200 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+. .++|+|||+|+.... ...+...+++|+.|+.++++.+.
T Consensus 56 ~~~~~~~~D~~d~~~-i-~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 133 (254)
T PRK12746 56 GKAFLIEADLNSIDG-V-KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTL 133 (254)
T ss_pred CcEEEEEcCcCCHHH-H-HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468899999998641 1 01122221 258999999997542 11223467899999999999887
Q ss_pred h
Q psy17241 87 S 87 (93)
Q Consensus 87 ~ 87 (93)
.
T Consensus 134 ~ 134 (254)
T PRK12746 134 P 134 (254)
T ss_pred H
Confidence 5
No 70
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.50 E-value=0.00019 Score=48.17 Aligned_cols=45 Identities=9% Similarity=0.016 Sum_probs=34.3
Q ss_pred HHHhcCcCEEEEcCcccChh-----hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 45 KLLQTNVNVIFHTAAIVNFE-----ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 45 ~~l~~~vd~V~H~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
...+.++|+|||+|+..... .....++++|+.|+.+++++|++.+
T Consensus 52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 34457899999999976431 1223467899999999999998875
No 71
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00074 Score=44.50 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh----------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF----------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|++++. .+..+ ...+|+|||+|+.... ...++..+.+|+.|+.++++++
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (250)
T PRK07774 55 GTAIAVQVDVSDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAV 128 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 35778999999863 23222 2368999999997531 1223446889999999999998
Q ss_pred Hh
Q psy17241 86 TS 87 (93)
Q Consensus 86 ~~ 87 (93)
..
T Consensus 129 ~~ 130 (250)
T PRK07774 129 YK 130 (250)
T ss_pred HH
Confidence 75
No 72
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.48 E-value=0.00054 Score=45.13 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=43.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (247)
T PRK12935 56 HDVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLP 128 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999864 333332 347999999998542 134455789999999999999864
No 73
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00067 Score=45.15 Aligned_cols=59 Identities=12% Similarity=0.239 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+ ...+|+|||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (258)
T PRK09134 59 RRAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR 131 (258)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999864 23322 2458999999987532 223345789999999999998865
No 74
>PRK06194 hypothetical protein; Provisional
Probab=97.45 E-value=0.00057 Score=46.11 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=40.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc-------CcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT-------NVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~-------~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|++++. .++.+.+ .+|+|||+|+..... ..++..+++|+.|+.++++++
T Consensus 55 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 125 (287)
T PRK06194 55 AEVLGVRTDVSDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125 (287)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence 46888999999863 3444433 579999999986531 233446889999999976664
No 75
>PRK05717 oxidoreductase; Validated
Probab=97.43 E-value=0.00063 Score=45.22 Aligned_cols=63 Identities=11% Similarity=0.138 Sum_probs=43.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccChh---------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNFE---------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...++.+. ..+|+|||+|+..... ..+...+++|+.|+.++++++..
T Consensus 56 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (255)
T PRK05717 56 ENAWFIAMDVADEAQ-V-AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP 130 (255)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 468899999998641 1 01122322 3589999999976421 22345789999999999999963
No 76
>KOG1429|consensus
Probab=97.41 E-value=2.2e-05 Score=54.38 Aligned_cols=57 Identities=26% Similarity=0.316 Sum_probs=42.6
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh---hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE---ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+.++.+..|+..+ ++.++|.|||+||+.+.. .++-.++..|+.||.+++.+|++.+
T Consensus 74 ~~~fel~~hdv~~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~ 133 (350)
T KOG1429|consen 74 HPNFELIRHDVVEP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG 133 (350)
T ss_pred CcceeEEEeechhH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC
Confidence 34566666666654 346789999999998753 2333478899999999999998754
No 77
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.40 E-value=0.00092 Score=44.27 Aligned_cols=57 Identities=18% Similarity=0.112 Sum_probs=39.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHH----HHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCA----TKEFLEL 84 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~ 84 (93)
.++.++.+|++++. .+..++ .++|+|||+|+.... ...++..+.+|+.| +.++++.
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 129 (262)
T PRK13394 56 GKAIGVAMDVTNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKH 129 (262)
T ss_pred ceEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 46788999999864 233222 358999999997642 12234467899999 6666666
Q ss_pred H
Q psy17241 85 A 85 (93)
Q Consensus 85 a 85 (93)
+
T Consensus 130 ~ 130 (262)
T PRK13394 130 M 130 (262)
T ss_pred H
Confidence 6
No 78
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0021 Score=42.09 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=43.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...++.+ ..++|.|||+|+.... ...+...+.+|+.|+.++++++.
T Consensus 59 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 59 GKALGLAFDVRDFAA-T-RAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred CcEEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 468899999998641 1 1112222 2468999999998652 12234468999999999999987
No 79
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.37 E-value=0.0013 Score=43.76 Aligned_cols=63 Identities=11% Similarity=0.021 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...+..+ ...+|+|||+|+.... ...++..+++|+.|+.++++++..
T Consensus 61 ~~~~~~~~Dl~d~~~-i-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 133 (259)
T PRK08213 61 IDALWIAADVADEAD-I-ERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAK 133 (259)
T ss_pred CeEEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHH
Confidence 467889999998641 1 0111222 2368999999997421 223345688999999999998764
No 80
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0014 Score=43.13 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh----h----hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF----E----ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... . ..+...+++|+.|+.++++.+..
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 52 GEALAVAADVADEA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred CcEEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788999999863 333332 368999999997532 1 22334689999999999888764
No 81
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.36 E-value=0.0014 Score=43.07 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=42.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+.++. .+..+. ..+|+|||+|+.... ...+...+..|+.|+.++++.+.
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 126 (251)
T PRK12826 55 GKARARQVDVRDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAAL 126 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45889999999863 333333 368999999988653 12334578999999999999885
No 82
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0013 Score=44.32 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+++|+.|+.++++++.
T Consensus 50 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~ 121 (277)
T PRK06180 50 DRALARLLDVTDFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVL 121 (277)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46888999999864 233332 358999999998642 12334568999999999999864
No 83
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.00096 Score=44.39 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH----hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL----QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l----~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++.+- + ...+..+ ...+|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 48 ~~~~~~~~D~~~~~~-v-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (260)
T PRK08267 48 GNAWTGALDVTDRAA-W-DAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121 (260)
T ss_pred CceEEEEecCCCHHH-H-HHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 468899999998641 1 1112222 2357999999997642 123445789999999999988853
No 84
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.34 E-value=0.0009 Score=46.16 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 55 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 55 DSYTIIHIDLGDLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46889999999863 233332 248999999996431 123345789999999999888764
No 85
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0013 Score=44.40 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=43.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+++|+.|+.++++++..
T Consensus 62 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 134 (273)
T PRK08278 62 GQALPLVGDVRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP 134 (273)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence 46888999999874 233222 368999999997542 122344788999999999999864
No 86
>PRK06128 oxidoreductase; Provisional
Probab=97.32 E-value=0.0014 Score=44.81 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=43.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...+.++ ..++|+|||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 106 ~~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 106 RKAVALPGDLKDEAF-C-RQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred CeEEEEecCCCCHHH-H-HHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 467789999998631 0 1112222 2468999999996421 123445789999999999999874
No 87
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0014 Score=42.83 Aligned_cols=59 Identities=12% Similarity=0.178 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (237)
T PRK07326 54 GNVLGLAADVRDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVP 126 (237)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 56889999999863 333222 378999999987542 223345688999999999888864
No 88
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.29 E-value=0.0015 Score=43.32 Aligned_cols=59 Identities=12% Similarity=0.255 Sum_probs=43.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|++||+|+.... ...++..+.+|+.|+.++++++..
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (257)
T PRK07067 52 PAAIAVSLDVTRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR 124 (257)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 35888999999864 333322 368999999997642 233445789999999999999864
No 89
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0017 Score=42.67 Aligned_cols=63 Identities=14% Similarity=0.171 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHH---HHhcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLK---LLQTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~---~l~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++..- + ...+. .....+|+|||+|+.... ...++..+++|+.|+.++++++..
T Consensus 52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (249)
T PRK06500 52 ESALVIRADAGDVAA-Q-KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP 124 (249)
T ss_pred CceEEEEecCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 467789999998531 0 01111 112468999999997542 123345789999999999999974
No 90
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.28 E-value=0.0016 Score=42.72 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+++|+.|+.++++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (239)
T PRK07666 56 VKVVIATADVSDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLP 128 (239)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999863 333333 378999999987532 123345789999999999888763
No 91
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0015 Score=42.85 Aligned_cols=59 Identities=12% Similarity=0.223 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+.+++ .++|+|||+|+.... ...++..+.+|+.|+.++++.+.+
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (245)
T PRK12937 55 GRAIAVQADVADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR 127 (245)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence 46889999999863 333332 368999999997542 123344688999999999988864
No 92
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.001 Score=44.44 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+++++.+|+++++ .+..++ ..+|+|||+|+.... .......+++|+.|+.++++.+.
T Consensus 45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 116 (270)
T PRK06179 45 PGVELLELDVTDDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116 (270)
T ss_pred CCCeeEEeecCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999863 344433 357999999998642 22345578999999999988864
No 93
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.002 Score=42.83 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=42.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh---hh-----hHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF---EA-----SLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~---~~-----~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ .++|+|||+|+.... .. .+...+.+|+.|+.++++.+..
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 123 (263)
T PRK06181 50 GEALVVPTDVSDAE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP 123 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999863 333332 368999999997542 11 1334689999999999998853
No 94
>PRK06398 aldose dehydrogenase; Validated
Probab=97.26 E-value=0.0018 Score=43.33 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=42.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|++++.- + ...++.+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 45 ~~~~~~~D~~~~~~-i-~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 116 (258)
T PRK06398 45 DVDYFKVDVSNKEQ-V-IKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP 116 (258)
T ss_pred ceEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 68899999998641 1 1112222 2368999999997532 223445689999999999888753
No 95
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0017 Score=43.54 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=42.4
Q ss_pred EEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 26 TIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.+|+++. +.+.....++|++||+|+.... .+.+...+++|+.|+.++++.+..
T Consensus 61 ~~~~~D~~~~------~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGKE------ESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCCH------HHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5678899875 3456666789999999997532 234455789999999999998764
No 96
>PRK08643 acetoin reductase; Validated
Probab=97.26 E-value=0.0021 Score=42.55 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...+.++ ..++|+|||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 51 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (256)
T PRK08643 51 GKAIAVKADVSDRDQ-V-FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123 (256)
T ss_pred CeEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 467889999998741 1 1112222 2468999999987532 223345788999999888877754
No 97
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0017 Score=43.38 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+ ..++|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (263)
T PRK07814 59 RRAHVVAADLAHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 46889999999864 33322 2368999999986432 123445789999999999999863
No 98
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.24 E-value=0.0026 Score=41.91 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHH---HHHHHhcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDE---NLKLLQTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~---~~~~l~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+.++.- + .. .+.+...++|+|||+|+.... ...++..+..|+.|+..+++.+.
T Consensus 50 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 121 (255)
T TIGR01963 50 GSVIYLVADVTKEDE-I-ADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAAL 121 (255)
T ss_pred CceEEEECCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468899999998631 0 01 122223568999999997643 12234467899999998888874
No 99
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0015 Score=43.26 Aligned_cols=59 Identities=14% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 47 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (252)
T PRK07856 47 RPAEFHAADVRDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA 119 (252)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999863 333332 357999999986431 123345789999999999998764
No 100
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0024 Score=42.00 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=40.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+++++ .++|+|||+|+.... ...++..+.+|+.|+.++.+.+.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (252)
T PRK06138 53 GRAFARQGDVGSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI 124 (252)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 45789999999864 333332 378999999997542 12234468899999988777654
No 101
>PRK06182 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0019 Score=43.31 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=38.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a 85 (93)
++.++.+|+++++ .+..+. .++|+|||+|+..... ..++..+++|+.|+..+++.+
T Consensus 47 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 116 (273)
T PRK06182 47 GVHPLSLDVTDEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116 (273)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHH
Confidence 5788999999863 344333 3789999999976431 233457889999965554433
No 102
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.18 E-value=0.0021 Score=42.40 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=43.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++++|+++++ .+..++ ..+|+|||+|+.... ...+...+++|+.++.++++.+..
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (252)
T PRK08220 48 YPFATFVLDVSDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP 120 (252)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999864 344433 347999999997643 123445789999999999998853
No 103
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0018 Score=43.62 Aligned_cols=58 Identities=9% Similarity=0.091 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 120 (275)
T PRK08263 49 DRLLPLALDVTDRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVL 120 (275)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46778899999863 23222 2468999999998643 23445678999999988888763
No 104
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0036 Score=41.09 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=42.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .++.+. .++|+|||+|+.... ...++..+..|+.|+.++++.+..
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (250)
T PRK12939 56 GRAHAIAADLADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALP 128 (250)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999864 333332 468999999997542 123344678999999999988754
No 105
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.003 Score=41.34 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=42.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ .++|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (247)
T PRK05565 55 GDAIAVKADVSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP 127 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999864 333332 278999999998632 123345788999999998887753
No 106
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.16 E-value=0.0023 Score=42.45 Aligned_cols=59 Identities=5% Similarity=0.084 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+.+|+.|+.++++.+.+
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (255)
T PRK07523 59 LSAHALAFDVTDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR 131 (255)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35788999999863 344333 357999999997642 122345678999999999998864
No 107
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.15 E-value=0.0029 Score=41.44 Aligned_cols=58 Identities=21% Similarity=0.269 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++.+ .+..+ ..++|.|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 123 (245)
T PRK12936 52 ERVKIFPANLSDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELT 123 (245)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHH
Confidence 46888999999863 33332 2468999999997542 22345578999999999988775
No 108
>PRK08264 short chain dehydrogenase; Validated
Probab=97.15 E-value=0.0033 Score=41.15 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc---CcCEEEEcCcccC-h-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT---NVNVIFHTAAIVN-F-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~---~vd~V~H~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..+.. .+|+|||+|+... . ...+...+.+|+.|+.++++++.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 117 (238)
T PRK08264 49 PRVVPLQLDVTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFA 117 (238)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999863 3444443 5899999999822 1 22334578899999999999875
No 109
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.14 E-value=0.0033 Score=41.36 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=41.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .++.+. .++|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 52 ~~~~~~~~d~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 123 (250)
T TIGR03206 52 GNAQAFACDITDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999863 333332 368999999986432 12224468999999999988875
No 110
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0024 Score=42.57 Aligned_cols=60 Identities=12% Similarity=0.224 Sum_probs=43.5
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHH------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLL------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..++.++.+|++++. .+..+ ...+|+|||+|+.... ...++..+++|+.|+.++++.+..
T Consensus 52 ~~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 124 (263)
T PRK09072 52 PGRHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP 124 (263)
T ss_pred CCceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 347889999999864 23322 2468999999997643 123345788999999999998864
No 111
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.12 E-value=0.0028 Score=42.13 Aligned_cols=59 Identities=12% Similarity=0.185 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..++ ..+|++||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 63 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (258)
T PRK06935 63 RKVTFVQVDLTKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAK 135 (258)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 46889999999864 333332 368999999997542 223345788999998888877653
No 112
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.12 E-value=0.0026 Score=41.48 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+.++. .+..++ .++|.|||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 127 (249)
T PRK12825 56 RRAQAVQADVTDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV 127 (249)
T ss_pred CceEEEECCcCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46889999999864 333322 468999999996543 12234568899999999998874
No 113
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.11 E-value=0.0028 Score=42.14 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=42.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..++ ..+|++||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 129 (253)
T PRK08993 57 RRFLSLTADLRKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK 129 (253)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46788999999853 333322 368999999997542 133455789999999999888753
No 114
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0034 Score=41.61 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=41.5
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++.++.+|++++. .+..+ ..++|+|||+|+.... ...+...+++|+.|+.++++.+.
T Consensus 59 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 130 (264)
T PRK12829 59 KVTATVADVADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAV 130 (264)
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5788999999864 23222 2478999999997621 12334578999999999998874
No 115
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0031 Score=42.34 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=41.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|++++. .+..+. .++|+|||+|+.... ...++..+++|+.|+.++++.+..
T Consensus 45 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 116 (274)
T PRK05693 45 GFTAVQLDVNDGA------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP 116 (274)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4678899999863 333322 468999999997532 123445789999999999988743
No 116
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.10 E-value=0.0031 Score=41.89 Aligned_cols=63 Identities=14% Similarity=0.058 Sum_probs=42.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...++.+ ...+|+|||+|+..... ..++..+.+|+.|+..+++.+..
T Consensus 67 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 139 (256)
T PRK12748 67 VRCEHMEIDLSQPYA-P-NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAK 139 (256)
T ss_pred CeEEEEECCCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 468899999998641 1 1112222 24689999999875321 22344688999999999988854
No 117
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.09 E-value=0.0024 Score=41.61 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=42.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ....+..+.+|+.|+.++++.+..
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (239)
T TIGR01830 48 VKALGVVCDVSDRE------DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR 120 (239)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35889999999864 333332 357999999998642 123345788999999999998864
No 118
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.09 E-value=0.0042 Score=40.50 Aligned_cols=59 Identities=15% Similarity=0.228 Sum_probs=42.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+ ..++|+|||+|+.... ...++..+.+|+.++.++++.+..
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (248)
T PRK05557 55 GKALAVQGDVSDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVAR 127 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999864 23322 2368999999997542 123344678999999999988864
No 119
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0027 Score=41.99 Aligned_cols=59 Identities=17% Similarity=0.091 Sum_probs=42.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..++ ..+|+|||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 54 RRALAVPTDITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred CceEEEecCCCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46889999999864 233222 468999999987432 133345789999999999999864
No 120
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.08 E-value=0.0036 Score=39.50 Aligned_cols=52 Identities=27% Similarity=0.310 Sum_probs=41.7
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..+++++.+|+.|+ +.+...+.++|.|||+++.... ....+.+++++|++.+
T Consensus 38 ~~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 38 SPGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKAG 89 (183)
T ss_dssp CTTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHTT
T ss_pred ccccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc----------cccccccccccccccc
Confidence 46899999999986 4688888999999999976443 1666888888888764
No 121
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.07 E-value=0.0039 Score=45.12 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=44.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.+..+.+|++++ +.+.+...++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 225 ~v~~v~~Dvsd~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 225 PVKTLHWQVGQE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CeEEEEeeCCCH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788999985 3566667889999999986532 123345789999999999999754
No 122
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0041 Score=41.71 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=41.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++.+.+
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 58 GAVRYEPADVTDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999863 333332 368999999986421 112344678999999999987754
No 123
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.06 E-value=0.004 Score=41.22 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=39.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ..++|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 46 ~~~~~~~~Dl~~~~~-i-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 118 (248)
T PRK10538 46 DNLYIAQLDVRNRAA-I-EEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118 (248)
T ss_pred cceEEEEecCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 468899999998631 1 1112222 2378999999986421 22334578999999777766654
No 124
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.05 E-value=0.00096 Score=44.24 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=42.1
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..++.+|+++.+ .+..+. .++|+|||+|+.... .+++..+++|+.|+..+++.+..
T Consensus 25 ~~~~~~Dl~~~~------~v~~~~~~~~~~iD~li~nAG~~~~-~~~~~~~~vN~~~~~~l~~~~~~ 84 (241)
T PRK12428 25 DGFIQADLGDPA------SIDAAVAALPGRIDALFNIAGVPGT-APVELVARVNFLGLRHLTEALLP 84 (241)
T ss_pred hHhhcccCCCHH------HHHHHHHHhcCCCeEEEECCCCCCC-CCHHHhhhhchHHHHHHHHHHHH
Confidence 346788998753 344443 368999999997643 45666789999999999999864
No 125
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.05 E-value=0.0031 Score=41.59 Aligned_cols=58 Identities=10% Similarity=0.070 Sum_probs=39.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+. .++|+|||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 53 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (258)
T PRK12429 53 GKAIGVAMDVTDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL 124 (258)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 56889999999864 333332 368999999997543 12233467889999666666554
No 126
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0039 Score=42.00 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l 130 (274)
T PRK07775 59 GEAVAFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130 (274)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46888999999864 333322 367999999997642 12334467899999999988875
No 127
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.05 E-value=0.0029 Score=43.56 Aligned_cols=58 Identities=14% Similarity=0.206 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ ....+ ...+|+|||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 62 ~~~~~~~~Dv~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 132 (306)
T PRK07792 62 AKAVAVAGDISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA 132 (306)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46889999999864 23332 2468999999998642 12344578999999999998875
No 128
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.04 E-value=0.0033 Score=40.96 Aligned_cols=62 Identities=11% Similarity=0.153 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...+..+ ...+|+|||+|+..... ..+...+..|+.++.++++.+.
T Consensus 54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (246)
T PRK05653 54 GEARVLVFDVSDEAA-V-RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125 (246)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 468899999998641 1 1112221 24579999999886431 2234468899999999998885
No 129
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.04 E-value=0.002 Score=39.55 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
.++.++.+|++++. .+..++ ..+|.|||+|+..... ..++..+.+|+.|+.++++.+++.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (180)
T smart00822 53 AEVTVVACDVADRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL 126 (180)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC
Confidence 46778999998753 233332 3479999999965321 233457889999999999998653
No 130
>PRK12743 oxidoreductase; Provisional
Probab=97.02 E-value=0.0053 Score=40.82 Aligned_cols=63 Identities=14% Similarity=0.038 Sum_probs=43.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + +..++++ ...+|+|||+|+.... ...+...+.+|+.|+..+++++..
T Consensus 52 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (256)
T PRK12743 52 VRAEIRQLDLSDLPE-G-AQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAAR 124 (256)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 468899999998641 0 0112222 2468999999997542 123445789999999999988764
No 131
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.01 E-value=0.0052 Score=40.45 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (250)
T PRK08063 54 RKALAVKANVGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAK 126 (250)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999864 333322 358999999986532 122233678999999999988875
No 132
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0054 Score=40.51 Aligned_cols=58 Identities=14% Similarity=0.072 Sum_probs=40.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc-CcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT-NVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~-~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..+.. ++|+|||+|+.... ...++..+.+|+.|+.++.+.+.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 116 (257)
T PRK09291 51 LALRVEKLDLTDAI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV 116 (257)
T ss_pred CcceEEEeeCCCHH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35889999999863 4554444 89999999997532 12234467889999887766543
No 133
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0048 Score=41.03 Aligned_cols=59 Identities=7% Similarity=0.143 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 54 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (263)
T PRK08226 54 HRCTAVVADVRDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP 126 (263)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46788999999863 333332 367999999997532 122344688999999999988764
No 134
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.01 E-value=0.0025 Score=41.85 Aligned_cols=59 Identities=15% Similarity=0.237 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+.+++ .+..+. ..+|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 53 GRAIAVAADVSDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 45889999999864 344333 357999999997432 123345788999998888877764
No 135
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0045 Score=40.05 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=37.8
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhc---CcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQT---NVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~---~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++++.+|++++. .+.+++. ++|+|||+|+..... ..+...+.+|+.+..++.+.+
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 113 (227)
T PRK08219 48 GATPFPVDLTDPE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113 (227)
T ss_pred cceEEecCCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 5788999999863 4555554 589999999975421 123345788999855544443
No 136
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0052 Score=40.84 Aligned_cols=59 Identities=10% Similarity=0.128 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|++||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (260)
T PRK07063 58 ARVLAVPADVTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLP 130 (260)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46888999999863 333332 368999999997532 223445788999999999888753
No 137
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0036 Score=41.05 Aligned_cols=58 Identities=9% Similarity=0.086 Sum_probs=41.3
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+..++.+|++++. .+..++ ..+|+|||+|+..... ..++..+.+|+.|+.++++.+.+
T Consensus 54 ~~~~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (245)
T PRK07060 54 GCEPLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVAR 121 (245)
T ss_pred CCeEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3567889998753 333333 3589999999976421 23344678999999999998865
No 138
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0032 Score=42.32 Aligned_cols=61 Identities=11% Similarity=0.174 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+++++.+|+++++- + +. +..+ ...+|+|||+|+.... ...++..+.+|+.|+.++++.+.
T Consensus 54 ~~~~~~~~D~~d~~~-~-~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (280)
T PRK06914 54 QNIKVQQLDVTDQNS-I-HN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVL 124 (280)
T ss_pred CceeEEecCCCCHHH-H-HH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 478899999998741 1 01 2222 2467999999997542 12334567899999999988864
No 139
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0032 Score=42.98 Aligned_cols=63 Identities=16% Similarity=0.225 Sum_probs=42.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNFE--------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++..- + ...+..+ ...+|+|||+|+..... +.+...+++|+.|+.++++++..
T Consensus 96 ~~~~~~~~Dl~~~~~-~-~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 96 VKCLLIPGDVSDEAF-C-KDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred CeEEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 468899999998641 1 1112222 23689999999975321 22345789999999999999875
No 140
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.00075 Score=44.49 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. .++|+|||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 122 (248)
T PRK07806 56 GRASAVGADLTDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALP 122 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHh
Confidence 45788999999864 333222 368999999986432 112334578999999999999975
No 141
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0055 Score=40.62 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+ ...+|++||+|+.... ...++..+.+|+.|+..+++++..
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (253)
T PRK05867 58 GKVVPVCCDVSQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130 (253)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence 46788999999864 23322 2478999999997542 123344678999999999888753
No 142
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0032 Score=43.10 Aligned_cols=63 Identities=13% Similarity=0.118 Sum_probs=39.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccChh-----hhHHHHHHHHHHH----HHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNFE-----ASLAQAVLSNVCA----TKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~~-----~~~~~~~~~Nv~g----t~~ll~~a~~ 87 (93)
.++.++.+|+++..- + ...+.++ ...+|+|||+|+..... ..++..+.+|+.| +..+++.+++
T Consensus 67 ~~~~~~~~Dl~d~~~-v-~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~ 141 (306)
T PRK06197 67 ADVTLQELDLTSLAS-V-RAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP 141 (306)
T ss_pred CceEEEECCCCCHHH-H-HHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh
Confidence 468899999998641 0 1112222 23589999999975431 2234467899999 5566666554
No 143
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0033 Score=42.58 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 126 (275)
T PRK05876 55 FDVHGVMCDVRHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL 126 (275)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 35788999999864 343332 357999999997532 12334568999999999998875
No 144
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.95 E-value=0.003 Score=41.92 Aligned_cols=63 Identities=8% Similarity=-0.004 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...+..+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 53 ~~~~~~~~D~~~~~~-i-~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (259)
T PRK12384 53 GMAYGFGADATSEQS-V-LALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSR 125 (259)
T ss_pred ceeEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 368899999998631 1 0111222 2468999999987542 223345679999999988887754
No 145
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0066 Score=41.55 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=40.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+. .++|+|||+||.... ...++..+.+|+.|+.++++.+.
T Consensus 89 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 162 (293)
T PRK05866 89 GDAMAVPCDLSDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162 (293)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999864 333333 378999999997532 12234478899999988887664
No 146
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0054 Score=40.53 Aligned_cols=59 Identities=8% Similarity=0.148 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. .++|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 61 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 133 (255)
T PRK06841 61 GNAKGLVCDVSDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR 133 (255)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 35678999999863 333322 368999999997642 123344789999999999998864
No 147
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0056 Score=40.68 Aligned_cols=59 Identities=17% Similarity=0.112 Sum_probs=42.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+. ..+|++||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 61 AKAVAFQADLTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred CcEEEEecCcCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 46888999999864 333322 368999999997421 123445789999999999988864
No 148
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.92 E-value=0.0037 Score=41.22 Aligned_cols=59 Identities=19% Similarity=0.107 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 49 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 121 (254)
T TIGR02415 49 GKAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAAR 121 (254)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46889999999864 23322 2367999999987532 223345789999999988877653
No 149
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.91 E-value=0.0067 Score=39.87 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=39.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++..+.+|+++.. .+..+ ..++|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (246)
T PRK12938 53 FDFIASEGNVGDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124 (246)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35778899999863 23322 2468999999997542 12334578999999887766654
No 150
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0062 Score=40.37 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=41.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+.+++ .++|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (260)
T PRK06198 56 AKAVFVQADLSDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK 128 (260)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46788999999864 233322 368999999997542 122344689999999999888754
No 151
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.88 E-value=0.0042 Score=41.22 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+ ...+|+|||+|+.... ...++..+.+|+.|+.++++.+.
T Consensus 60 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (255)
T PRK06113 60 GQAFACRCDITSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVA 130 (255)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 36788899999864 23222 2467999999997542 13334568999999999999986
No 152
>PRK09186 flagellin modification protein A; Provisional
Probab=96.86 E-value=0.0046 Score=40.82 Aligned_cols=58 Identities=10% Similarity=0.082 Sum_probs=38.5
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh----------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF----------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+.++.+|+++++ .+..+. ..+|+|||+|+.... ...+...+.+|+.++..+++.+.
T Consensus 56 ~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (256)
T PRK09186 56 KLSLVELDITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFA 129 (256)
T ss_pred ceeEEEecCCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 5678899999864 343333 248999999975321 12234467889988887776664
Q ss_pred h
Q psy17241 87 S 87 (93)
Q Consensus 87 ~ 87 (93)
.
T Consensus 130 ~ 130 (256)
T PRK09186 130 K 130 (256)
T ss_pred H
Confidence 3
No 153
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0045 Score=40.64 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=41.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ...+|+|||+|+.... ...++..+.+|+.|+.++++.+.
T Consensus 55 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (241)
T PRK07454 55 VKAAAYSIDLSNPEA-I-APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126 (241)
T ss_pred CcEEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 468899999998641 1 0112222 2358999999997532 12334568899999998887764
No 154
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.85 E-value=0.0052 Score=40.44 Aligned_cols=59 Identities=8% Similarity=0.119 Sum_probs=41.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cC-cCEEEEcCcccC---------h----hhhHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TN-VNVIFHTAAIVN---------F----EASLAQAVLSNVCATKEF 81 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~-vd~V~H~Aa~~~---------~----~~~~~~~~~~Nv~gt~~l 81 (93)
.++.++.+|++++. .+..++ .. +|+|||+|+... + ...+...+++|+.|+.++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 125 (253)
T PRK08642 52 DRAIALQADVTDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence 46888999999864 233322 23 899999997521 1 123345789999999999
Q ss_pred HHHHHh
Q psy17241 82 LELATS 87 (93)
Q Consensus 82 l~~a~~ 87 (93)
++.+..
T Consensus 126 ~~~~~~ 131 (253)
T PRK08642 126 IQAALP 131 (253)
T ss_pred HHHHHH
Confidence 999863
No 155
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.84 E-value=0.0063 Score=39.80 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=42.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh-------------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE-------------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~-------------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+++.++.+|++++.- ...+.+...++|+|||+|+..... ..+...+.+|+.|+..+++.+..
T Consensus 43 ~~~~~~~~Dls~~~~---~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 117 (235)
T PRK09009 43 DNVQWHALDVTDEAE---IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP 117 (235)
T ss_pred CceEEEEecCCCHHH---HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 478899999998641 112233346789999999986321 12234678999999888887764
No 156
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.007 Score=40.11 Aligned_cols=59 Identities=5% Similarity=0.100 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccC---h---hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVN---F---EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~---~---~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..++ ..+|+|||+|+... + ...++..+.+|+.|+.++++.+..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (258)
T PRK08628 55 PRAEFVQVDLTDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP 126 (258)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46889999999864 233322 36899999999642 1 133445788999999999888764
No 157
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0094 Score=39.22 Aligned_cols=62 Identities=16% Similarity=0.035 Sum_probs=41.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...++.+ ...+|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 53 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (248)
T PRK08251 53 IKVAVAALDVNDHDQ-V-FEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAM 124 (248)
T ss_pred ceEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468899999998631 1 1112222 2468999999987532 12234468899999999988875
No 158
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.82 E-value=0.0075 Score=39.68 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=40.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh----h----hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF----E----ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + .+.++.+ ...+|+|||+|+.... . ..+...+.+|+.|+..+++.+.
T Consensus 52 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (248)
T PRK06947 52 GRACVVAGDVANEAD-V-IAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA 124 (248)
T ss_pred CcEEEEEeccCCHHH-H-HHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 468899999998641 1 1112222 2468999999997532 1 1223468899999988875543
No 159
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.009 Score=39.55 Aligned_cols=62 Identities=10% Similarity=0.127 Sum_probs=39.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ...+|++||+|+.... .+.++..+.+|+.|+..+.+.+.
T Consensus 55 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~ 127 (254)
T PRK07478 55 GEAVALAGDVRDEAY-A-KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQI 127 (254)
T ss_pred CcEEEEEcCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468889999998641 0 1112222 2368999999997532 12234578999998887766554
No 160
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0061 Score=40.75 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccC---h---hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVN---F---EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~---~---~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. ..+|++||+|+... + ...+...+++|+.|+..+++.+..
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (261)
T PRK08265 52 ERARFIATDITDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHP 123 (261)
T ss_pred CeeEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 46889999999863 333332 36799999999642 1 233445789999999999887754
No 161
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.78 E-value=0.0023 Score=42.68 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++++.+|+++.. ..+...+ .++|+|||+++......+. ..+.+|..|+.++++++.+.+
T Consensus 62 ~~~~~~~~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~~-~~~~~n~~~~~~ll~a~~~~~ 123 (251)
T PLN00141 62 PSLQIVRADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFDPF-APWKVDNFGTVNLVEACRKAG 123 (251)
T ss_pred CceEEEEeeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCCCC-CceeeehHHHHHHHHHHHHcC
Confidence 36899999999741 2344445 6899999998864322222 235789999999999998653
No 162
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.78 E-value=0.0089 Score=39.02 Aligned_cols=60 Identities=18% Similarity=0.156 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccC----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVN----F----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++ + +...+....+|+|||+|+... + ...++..+.+|+.|+.++++.+..
T Consensus 45 ~~~~~~~~D~~~~-~----~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 112 (235)
T PRK06550 45 GNFHFLQLDLSDD-L----EPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP 112 (235)
T ss_pred CcEEEEECChHHH-H----HHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3578889999875 1 223333467899999999642 1 123345789999999999998863
No 163
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0083 Score=39.07 Aligned_cols=55 Identities=16% Similarity=0.076 Sum_probs=38.2
Q ss_pred EEEeccCCCCCCCCCHHHHHHHhc------CcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 26 TIICGDCSKKKLGISDENLKLLQT------NVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l~~------~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
+++.+|++++. .+..++. ++|+|||+|+.... ...+...+.+|+.|+.++.+.+.
T Consensus 44 ~~~~~D~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 111 (234)
T PRK07577 44 ELFACDLADIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111 (234)
T ss_pred eEEEeeCCCHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 57889999863 2333222 57999999997643 12333468899999988877764
No 164
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0057 Score=40.68 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=39.8
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
++.++.+|+++++ .+.++. ..+|+|||+|+.... ...++..+.+|+.|+.++++..
T Consensus 51 ~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 121 (257)
T PRK07024 51 RVSVYAADVRDAD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPF 121 (257)
T ss_pred eeEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHH
Confidence 7889999999864 233322 347999999997531 1234557899999999987744
No 165
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.008 Score=39.89 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=37.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
++.++.+|++++. .+..+. .++|+|||+|+.... ...++..+++|+.|+..+.+.+
T Consensus 52 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 121 (255)
T PRK06463 52 GVFTIKCDVGNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEF 121 (255)
T ss_pred CCeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 4778999999864 333322 368999999987531 1233457899999976665444
No 166
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0066 Score=40.22 Aligned_cols=63 Identities=8% Similarity=-0.000 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...+..+ ...+|+|||+|+.... ...++..+++|+.|+.++++++.+
T Consensus 50 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (252)
T PRK07677 50 GQVLTVQMDVRNPED-V-QKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGK 122 (252)
T ss_pred CcEEEEEecCCCHHH-H-HHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 578899999998641 0 1112222 2468999999985321 122345789999999999998853
No 167
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.77 E-value=0.0088 Score=39.03 Aligned_cols=62 Identities=11% Similarity=0.117 Sum_probs=39.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...++.+ ...+|+|||+|+.... ...+...+.+|+.|+..+++.+.
T Consensus 50 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 121 (242)
T TIGR01829 50 FDFRVVEGDVSSFES-C-KAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121 (242)
T ss_pred CceEEEEecCCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468899999998631 1 1112222 2468999999987532 12334467899999888665543
No 168
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0069 Score=39.87 Aligned_cols=63 Identities=13% Similarity=0.022 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++++|++++.- + ...++.+...+|+|||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 51 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (243)
T PRK07102 51 VAVSTHELDILDTAS-H-AAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLAN 120 (243)
T ss_pred CeEEEEecCCCChHH-H-HHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 478899999998641 1 11222333457999999987532 112234678999999999988754
No 169
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.76 E-value=0.0078 Score=39.60 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=42.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...++.+ ...+|+|||+|+.... ...+++.+.+|+.|+.++++.+..
T Consensus 52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (248)
T TIGR01832 52 RRFLSLTADLSDIEA-I-KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAK 124 (248)
T ss_pred CceEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 468899999998641 1 1111222 2468999999997642 123445688999999999988753
No 170
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.75 E-value=0.0088 Score=39.60 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. ..+|+|||+|+.... ...++..+++|+.|+..+++.+..
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (254)
T PRK08085 58 IKAHAAPFNVTHKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVAR 130 (254)
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45778899999864 233322 358999999997532 233445789999999988887764
No 171
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.74 E-value=0.0084 Score=40.05 Aligned_cols=59 Identities=8% Similarity=0.116 Sum_probs=41.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .++.+. ..+|+|||+|+.... ...+...+.+|+.|+..+++.+..
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (265)
T PRK07097 59 IEAHGYVCDVTDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP 131 (265)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46889999999864 333322 358999999998642 123344688999999888877653
No 172
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0055 Score=40.71 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=40.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 58 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (254)
T PRK06114 58 RRAIQIAADVTSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEA 129 (254)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 46788999999864 23322 2457999999997642 22344578899999988877764
No 173
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.71 E-value=0.0057 Score=40.70 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=42.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. ..+|++||+|+.... ...++..+++|+.|+..+.+.+..
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 127 (251)
T PRK12481 55 RKFHFITADLIQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAK 127 (251)
T ss_pred CeEEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHH
Confidence 46889999999864 333332 468999999997542 233445788999999988887753
No 174
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0081 Score=40.26 Aligned_cols=59 Identities=14% Similarity=0.022 Sum_probs=41.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 130 (264)
T PRK07576 58 PEGLGVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP 130 (264)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45778999999863 233322 357999999975321 223345688999999999988764
No 175
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.71 E-value=0.01 Score=39.83 Aligned_cols=62 Identities=10% Similarity=0.044 Sum_probs=39.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh----------------------hhhHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF----------------------EASLAQAVLSNVCA 77 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~----------------------~~~~~~~~~~Nv~g 77 (93)
.++.++.+|++++.- + ...+..+ ...+|+|||+|+.... ...+...+++|+.+
T Consensus 59 ~~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 59 GEALAVKADVLDKES-L-EQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred CeEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 368889999998631 0 0111222 2478999999996432 12344578899999
Q ss_pred HHHHHHHHH
Q psy17241 78 TKEFLELAT 86 (93)
Q Consensus 78 t~~ll~~a~ 86 (93)
+..+++.+.
T Consensus 137 ~~~~~~~~~ 145 (278)
T PRK08277 137 TLLPTQVFA 145 (278)
T ss_pred HHHHHHHHH
Confidence 987766554
No 176
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.007 Score=40.85 Aligned_cols=63 Identities=11% Similarity=0.122 Sum_probs=39.3
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCcccCh-------hhhHHHHHHHHHHH----HHHHHHHHHhc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIVNF-------EASLAQAVLSNVCA----TKEFLELATSF 88 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~ 88 (93)
+++++.+|++++.- + ...++.+. ..+|+|||+|+.... ...++..+++|+.| +..++..+++.
T Consensus 48 ~~~~~~~Dl~d~~~-~-~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 48 GLEAFQLDYAEPES-I-AALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred CceEEEccCCCHHH-H-HHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 57789999998631 0 11122221 357999999987542 12234578999999 55566666543
No 177
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0074 Score=40.04 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=40.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...+..+ ...+|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 49 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 122 (260)
T PRK06523 49 EGVEFVAADLTTAEG-C-AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL 122 (260)
T ss_pred CceeEEecCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 468889999998641 0 0111122 2468999999995421 22345578899999988876654
No 178
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.011 Score=37.90 Aligned_cols=55 Identities=13% Similarity=0.232 Sum_probs=38.6
Q ss_pred EEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 27 IICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 27 ~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.+.+|+++++ .++.+. .++|+|||+|+...+ ...+...+++|+.|+.++++.+..
T Consensus 35 ~~~~D~~~~~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 99 (199)
T PRK07578 35 DVQVDITDPA------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH 99 (199)
T ss_pred ceEecCCChH------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678998863 344333 478999999997532 123344688999999999998764
No 179
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.69 E-value=0.0058 Score=40.75 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh----------------hhhHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF----------------EASLAQAVLSNVCATK 79 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~----------------~~~~~~~~~~Nv~gt~ 79 (93)
.++.++.+|++++. .++.+. ..+|+|||+|+.... ...++..+.+|+.|+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (266)
T PRK06171 49 ENYQFVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF 122 (266)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence 36778999999863 333322 368999999996421 1223447899999999
Q ss_pred HHHHHHHh
Q psy17241 80 EFLELATS 87 (93)
Q Consensus 80 ~ll~~a~~ 87 (93)
.+++++..
T Consensus 123 ~l~~~~~~ 130 (266)
T PRK06171 123 LMSQAVAR 130 (266)
T ss_pred HHHHHHHH
Confidence 99988864
No 180
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.011 Score=38.39 Aligned_cols=58 Identities=16% Similarity=0.017 Sum_probs=42.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+++++.+|++++. .+..+. ..+|++||+|+.... ....+..+++|+.|+.+++++..
T Consensus 45 ~~~~~~~~Dl~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 112 (230)
T PRK07041 45 APVRTAALDITDEA------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR 112 (230)
T ss_pred CceEEEEccCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 46889999999863 454444 357999999997532 12334578999999999988543
No 181
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.68 E-value=0.01 Score=39.06 Aligned_cols=58 Identities=9% Similarity=0.101 Sum_probs=40.9
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|++++. .+..+ ...+|+|||+||.... ...++..+.+|+.|+.++++.+.+
T Consensus 57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (252)
T PRK06077 57 EGIGVLADVSTRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAK 128 (252)
T ss_pred eeEEEEeccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHH
Confidence 5678889999864 22222 2468999999996432 112245689999999999998875
No 182
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.017 Score=40.50 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=41.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .++.+. ..+|++||+|+.... .+.++..+++|+.|+.++.+.+.
T Consensus 56 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~l 127 (330)
T PRK06139 56 AEVLVVPTDVTDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAAL 127 (330)
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 46778899999863 344332 468999999997532 12334578999999999887764
No 183
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.67 E-value=0.0084 Score=43.27 Aligned_cols=62 Identities=18% Similarity=0.139 Sum_probs=41.1
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
..++.+|++++.- + ...+..+ ...+|+|||+|+.... ...++..+.+|+.|+.++.+.+...
T Consensus 258 ~~~~~~Dv~~~~~-~-~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 329 (450)
T PRK08261 258 GTALALDITAPDA-P-ARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAA 329 (450)
T ss_pred CeEEEEeCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 3577889998631 0 1111222 1258999999997642 2334457899999999999998763
No 184
>PRK05855 short chain dehydrogenase; Validated
Probab=96.66 E-value=0.0076 Score=44.12 Aligned_cols=58 Identities=10% Similarity=0.024 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 364 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 435 (582)
T PRK05855 364 AVAHAYRVDVSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFG 435 (582)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 36889999999874 333332 358999999998642 22344578899999999888764
No 185
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.014 Score=38.85 Aligned_cols=59 Identities=12% Similarity=0.165 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+. ..+|+|||+|+.... ...+...+.+|+.|+..+++.+..
T Consensus 69 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (262)
T PRK07831 69 GRVEAVVCDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR 141 (262)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36888999999863 333322 367999999996431 123445678999999998888754
No 186
>PRK06196 oxidoreductase; Provisional
Probab=96.62 E-value=0.0098 Score=40.95 Aligned_cols=57 Identities=9% Similarity=0.197 Sum_probs=38.5
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++.++.+|++++. .++.+. .++|+|||+|+.... ...++..+.+|+.|+..+++.+.
T Consensus 72 ~v~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll 140 (315)
T PRK06196 72 GVEVVMLDLADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLW 140 (315)
T ss_pred hCeEEEccCCCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHH
Confidence 3778999999863 333322 468999999997532 12334568899999766665443
No 187
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.011 Score=39.12 Aligned_cols=58 Identities=7% Similarity=0.108 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ ++..+. ..+|+|||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (258)
T PRK06949 58 GAAHVVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA 129 (258)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 46889999999863 343333 368999999996432 12334568899999999988775
No 188
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.59 E-value=0.013 Score=36.15 Aligned_cols=59 Identities=19% Similarity=0.239 Sum_probs=44.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++++|++++. .++.+. ..+|++||+|+.... .+.++..+.+|+.+...+.+.+..
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (167)
T PF00106_consen 52 AKITFIECDLSDPE------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP 124 (167)
T ss_dssp SEEEEEESETTSHH------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccccccccccc------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence 68999999999863 333332 478999999998762 233445789999999999888765
No 189
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.013 Score=38.87 Aligned_cols=58 Identities=17% Similarity=0.105 Sum_probs=40.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+.+++ .+..++ .++|+|||+|+..... ..+...+.+|+.|+.++++.+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 120 (257)
T PRK07074 49 ARFVPVACDLTDAA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120 (257)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 36889999999864 333322 3589999999975421 1223356799999999998884
No 190
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.58 E-value=0.013 Score=38.23 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=40.5
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
..++.++.+|+++++- + ...++.+ ...+|+|||+|+.... ...++..+.+|+.|+.++.+.+
T Consensus 51 ~~~~~~~~~D~~~~~~-v-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 122 (245)
T PRK12824 51 EDQVRLKELDVTDTEE-C-AEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPL 122 (245)
T ss_pred CCeEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 3468899999998641 1 1112222 2358999999997532 2233457889999999886654
No 191
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=39.11 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=39.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|++++. .+..+. .++|+|||+|+.... ...++..+.+|+.|+.++.+.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (270)
T PRK05650 49 GDGFYQRCDVRDYS------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119 (270)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence 46888999999863 333332 368999999997642 1233446789999888876664
No 192
>PRK07985 oxidoreductase; Provisional
Probab=96.57 E-value=0.011 Score=40.50 Aligned_cols=63 Identities=16% Similarity=0.125 Sum_probs=42.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN----F----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...++.+ ...+|+++|+|+... + ...+...+++|+.|+..+++++..
T Consensus 100 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 100 RKAVLLPGDLSDEKF-A-RSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred CeEEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 457789999998631 1 0111222 246899999998642 1 123345789999999999998864
No 193
>KOG1205|consensus
Probab=96.54 E-value=0.022 Score=39.48 Aligned_cols=62 Identities=19% Similarity=0.152 Sum_probs=44.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHH---HHhcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLK---LLQTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~---~l~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++..+.+|++|.+- .+..++ ....++|+.+|.|+.... ....+..+++|+.|+..+.+++..
T Consensus 64 ~v~~~~~Dvs~~~~--~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp 135 (282)
T KOG1205|consen 64 KVLVLQLDVSDEES--VKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALP 135 (282)
T ss_pred ccEEEeCccCCHHH--HHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHH
Confidence 79999999999752 011122 234689999999998752 123344789999999998888753
No 194
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.013 Score=38.20 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=41.6
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---h--cCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---Q--TNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~--~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+++++.+|+++.+ .++.+ . ..+|+|||+|+.... ...++..+++|+.|+.++++.+..
T Consensus 45 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 116 (222)
T PRK06953 45 GAEALALDVADPA------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP 116 (222)
T ss_pred cceEEEecCCCHH------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 3568899999874 23332 2 248999999998621 223345789999999999998864
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.019 Score=40.18 Aligned_cols=58 Identities=7% Similarity=0.053 Sum_probs=39.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .++.+ ...+|++||+|+...+ .+.++..+++|+.|+.++.+.+.
T Consensus 57 ~~~~~v~~Dv~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l 128 (334)
T PRK07109 57 GEALAVVADVADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128 (334)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46888999999864 33333 2368999999997532 12334467888888777655553
No 196
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.49 E-value=0.0045 Score=41.31 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh----h--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF----E--------ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~----~--------~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + ...++.+ ...+|++||+|+.... . ..++..+++|+.|+..+++++..
T Consensus 51 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 51 DAVVGVEGDVRSLDD-H-KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred CceEEEEeccCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 468889999998631 0 1112222 2468999999986421 0 12445789999999999999865
No 197
>PRK09242 tropinone reductase; Provisional
Probab=96.49 E-value=0.013 Score=38.81 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=41.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ...+|+|||+|+.... ...++..+.+|+.|+.++++++.
T Consensus 60 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 131 (257)
T PRK09242 60 REVHGLAADVSDDED-R-RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAH 131 (257)
T ss_pred CeEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 468889999998631 0 0112222 3468999999997421 22334578999999999988875
No 198
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.012 Score=38.94 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=39.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... .+.++..+.+|+.++..+++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 128 (253)
T PRK06172 56 GEALFVACDVTRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI 128 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46889999999863 333322 357999999997421 12334568899999987776543
No 199
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.49 E-value=0.0061 Score=40.64 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=41.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-----h---h----hHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-----E---A----SLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-----~---~----~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + +..++.+ ...+|++||+|+.... . . .++..+++|+.|+..+++.+..
T Consensus 52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 52 DHVLVVEGDVTSYAD-N-QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred CcceEEEccCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 467889999998641 1 1112222 2368999999997431 1 1 1344678899999999888864
No 200
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.47 E-value=0.015 Score=38.49 Aligned_cols=59 Identities=8% Similarity=0.145 Sum_probs=41.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 132 (256)
T PRK06124 60 GAAEALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQ 132 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999863 333222 357999999997532 123344688999999999977754
No 201
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.02 Score=37.59 Aligned_cols=60 Identities=13% Similarity=0.058 Sum_probs=39.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHH----H---h-cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKL----L---Q-TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~----l---~-~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.+.++.+|+++.. .+.+.. + . ..+|+|||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~D~~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 132 (239)
T PRK08703 57 EPFAIRFDLMSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP 132 (239)
T ss_pred CcceEEeeecccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4567888987642 112222 2 2 467999999996421 123334689999999999888854
No 202
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.017 Score=37.90 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=40.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCccc---------Ch---hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIV---------NF---EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~---------~~---~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|++++. .++.+. +.+|++||+|+.. .+ ...+...+++|+.|+..+++.+..
T Consensus 45 ~~~~~~~D~~~~~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 118 (223)
T PRK05884 45 DVDAIVCDNTDPA------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGD 118 (223)
T ss_pred cCcEEecCCCCHH------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568889999863 333333 3689999999742 11 123445789999999999988764
No 203
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.026 Score=38.56 Aligned_cols=59 Identities=10% Similarity=0.153 Sum_probs=41.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..+..+.+|+++++ .+..+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 129 (296)
T PRK05872 57 DRVLTVVADVTDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLP 129 (296)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35666779999863 23222 2468999999997542 223445789999999999988753
No 204
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.41 E-value=0.022 Score=37.73 Aligned_cols=62 Identities=6% Similarity=0.043 Sum_probs=38.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...+..+ ...+|++||+|+.... ...+...+++|+.|+..+++.+.
T Consensus 56 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 128 (260)
T PRK12823 56 GEALALTADLETYAG-A-QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVL 128 (260)
T ss_pred CeEEEEEEeCCCHHH-H-HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHH
Confidence 467889999998631 0 1112222 2468999999985321 12234467889998876665554
No 205
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.015 Score=38.97 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=39.8
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
+.++.+|+++++. + ...++.+ ...+|+|||+|+.... ...++..+.+|+.|+.++++.+.
T Consensus 52 ~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (272)
T PRK07832 52 PEHRALDISDYDA-V-AAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFV 121 (272)
T ss_pred ceEEEeeCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5567899998641 1 1112222 2458999999987532 22334578999999999999874
No 206
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.018 Score=37.35 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=40.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++++.+|+.+.. ++..+. .++|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 55 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (239)
T PRK12828 55 ALRIGGIDLVDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALP 126 (239)
T ss_pred CceEEEeecCCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHH
Confidence 4677889998853 333322 368999999986532 122344678999999999988753
No 207
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.026 Score=37.21 Aligned_cols=60 Identities=18% Similarity=0.141 Sum_probs=39.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+.+.+ ++.+.++ ...+|+|||+|+.... ...++..+++|+.|+.++++.+.
T Consensus 62 ~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 136 (247)
T PRK08945 62 PQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALL 136 (247)
T ss_pred CCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 46778888887432 1222222 2468999999987532 12344578999999999888774
No 208
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.37 E-value=0.01 Score=38.87 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=40.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..++ ..+|+|||+|+.... ...++..+.+|+.|+..+++.+..
T Consensus 51 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 51 GKAFVLQADISDEN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35788999999874 233332 357999999997532 122345789999999888776643
No 209
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.012 Score=40.71 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=40.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccChh------hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNFE------ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ ..+.+ ...+|++||+|+..... +.++..+.+|+.|...+.+.+.
T Consensus 65 ~~v~~~~~Dl~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~ll 135 (313)
T PRK05854 65 AKLSLRALDLSSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLL 135 (313)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHH
Confidence 36889999999863 23322 23589999999976421 2344578999999887777665
No 210
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.35 E-value=0.025 Score=37.62 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=38.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|++++. .+..+ ...+|++||+|+.... ...++..+.+|+.|+..+++.+
T Consensus 57 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~ 127 (261)
T PRK08936 57 GEAIAVKGDVTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREA 127 (261)
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 45778999999864 23322 2368999999997542 1233446889998887665544
No 211
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.0076 Score=39.31 Aligned_cols=58 Identities=22% Similarity=0.204 Sum_probs=40.1
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-----cCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-----TNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-----~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|+++++ .+..+. .++|+|||+|+.... ...+...+.+|+.|+..+++.+..
T Consensus 46 ~~~~~~~D~~d~~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 117 (225)
T PRK08177 46 GVHIEKLDMNDPA------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLG 117 (225)
T ss_pred ccceEEcCCCCHH------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHH
Confidence 5678889999863 233332 258999999987532 122334678899999999888754
No 212
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.029 Score=37.06 Aligned_cols=63 Identities=17% Similarity=0.101 Sum_probs=40.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++..+..|+++..- + ...+..+. ..+|++||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 131 (252)
T PRK12747 54 GSAFSIGANLESLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 131 (252)
T ss_pred CceEEEecccCCHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 356678899987531 1 11122221 268999999996431 12234577899999999998776
Q ss_pred h
Q psy17241 87 S 87 (93)
Q Consensus 87 ~ 87 (93)
.
T Consensus 132 ~ 132 (252)
T PRK12747 132 S 132 (252)
T ss_pred H
Confidence 4
No 213
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.032 Score=36.82 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=39.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++..- + +..+..+ ...+|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 57 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (252)
T PRK07035 57 GKAEALACHIGEMEQ-I-DALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAG 129 (252)
T ss_pred CeEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357789999998631 1 1112222 2368999999986421 12234578899999988887764
No 214
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.29 E-value=0.02 Score=37.53 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=39.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh----------------hhhHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF----------------EASLAQAVLSNVCATKEFLE 83 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~ 83 (93)
.++.++.+|++++.- + .+.++.+ ...+|+|||+|+.... ...+...+.+|+.|+..+++
T Consensus 54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (253)
T PRK08217 54 TEVRGYAANVTDEED-V-EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR 131 (253)
T ss_pred CceEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 468889999998631 1 1112222 1357999999986431 12334467899999988776
Q ss_pred HHH
Q psy17241 84 LAT 86 (93)
Q Consensus 84 ~a~ 86 (93)
.+.
T Consensus 132 ~~~ 134 (253)
T PRK08217 132 EAA 134 (253)
T ss_pred HHH
Confidence 554
No 215
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.034 Score=37.32 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=40.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .++.+. ..+|++||+|+.... .+.+...+++|+.|...+.+.+.
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 128 (263)
T PRK08339 58 VDVSYIVADLTKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALV 128 (263)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999863 333332 358999999997532 23344578899988777766554
No 216
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.026 Score=37.21 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=42.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc----CcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT----NVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~----~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ .+..+++ ..|.++|.|+.... .+.++..+++|+.|+.++++.+..
T Consensus 46 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 115 (240)
T PRK06101 46 ANIFTLAFDVTDHP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQP 115 (240)
T ss_pred CCCeEEEeeCCCHH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999863 4444443 36899999986432 122345789999999999998875
No 217
>PLN00015 protochlorophyllide reductase
Probab=96.26 E-value=0.028 Score=38.65 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=40.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++..- + ......+. ..+|++||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 47 ~~~~~~~~Dl~d~~~-v-~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l 119 (308)
T PLN00015 47 DSYTVMHLDLASLDS-V-RQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLL 119 (308)
T ss_pred CeEEEEEecCCCHHH-H-HHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468889999998641 1 11122222 358999999997431 12344578999999888876654
No 218
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.25 E-value=0.022 Score=37.28 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=40.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|+++++ .+..+ ...+|.+||+|+.... ...+...+.+|+.|+.++++.+
T Consensus 48 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 118 (239)
T TIGR01831 48 GNARLLQFDVADRV------ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118 (239)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 46889999999864 23322 2357999999986531 2234457899999999998876
No 219
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.25 E-value=0.023 Score=38.00 Aligned_cols=64 Identities=13% Similarity=0.067 Sum_probs=40.9
Q ss_pred CCEEEEeccCCCCCCCCC---HHHHHHH---hcCcCEEEEcCcccChh------------------hhHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGIS---DENLKLL---QTNVNVIFHTAAIVNFE------------------ASLAQAVLSNVCAT 78 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~---~~~~~~l---~~~vd~V~H~Aa~~~~~------------------~~~~~~~~~Nv~gt 78 (93)
.++.++.+|++|++- +. +..++.+ ...+|+|||+|+..... ..+...+.+|+.|+
T Consensus 52 ~~~~~~~~Dv~d~~~-~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 130 (267)
T TIGR02685 52 NSAVTCQADLSNSAT-LFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAP 130 (267)
T ss_pred CceEEEEccCCCchh-hHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHH
Confidence 356678999999741 10 0111221 24689999999964320 12345689999999
Q ss_pred HHHHHHHHh
Q psy17241 79 KEFLELATS 87 (93)
Q Consensus 79 ~~ll~~a~~ 87 (93)
..+++.+..
T Consensus 131 ~~l~~~~~~ 139 (267)
T TIGR02685 131 YFLIKAFAQ 139 (267)
T ss_pred HHHHHHHHH
Confidence 999887653
No 220
>PRK12742 oxidoreductase; Provisional
Probab=96.21 E-value=0.028 Score=36.68 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=38.8
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.++.+|++++. .+.++. ..+|+|||+|+.... ...++..+++|+.|+..++..+..
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (237)
T PRK12742 53 ATAVQTDSADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAAR 119 (237)
T ss_pred CeEEecCCCCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 567788998753 233322 458999999997532 123345789999999988766554
No 221
>PRK08324 short chain dehydrogenase; Validated
Probab=96.21 E-value=0.028 Score=42.98 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=42.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++. .+..++ .++|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 470 ~~v~~v~~Dvtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 542 (681)
T PRK08324 470 DRALGVACDVTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVR 542 (681)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 47889999999863 333322 368999999996542 123345789999999999888753
No 222
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.022 Score=38.18 Aligned_cols=61 Identities=16% Similarity=0.060 Sum_probs=40.4
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++.++.+|+++++- + ...++.+ ..++|++||+|+.... ...+...+++|+.|+..+.+.+.
T Consensus 51 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 121 (273)
T PRK07825 51 LVVGGPLDVTDPAS-F-AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAA 121 (273)
T ss_pred cceEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57789999998641 1 0112222 2468999999997542 12334578999999988877764
No 223
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.01 Score=39.03 Aligned_cols=59 Identities=20% Similarity=0.142 Sum_probs=40.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHH-----Hh------cCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKL-----LQ------TNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLE 83 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~-----l~------~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~ 83 (93)
.++.++.+|+++++ .+.. +. ..+|++||+|+.... .+.++..+.+|+.|+..+++
T Consensus 45 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (243)
T PRK07023 45 ERLAEVELDLSDAA------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA 118 (243)
T ss_pred CeEEEEEeccCCHH------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence 46888999999864 2332 11 257899999997542 12334567899999877766
Q ss_pred HHHh
Q psy17241 84 LATS 87 (93)
Q Consensus 84 ~a~~ 87 (93)
.+..
T Consensus 119 ~~~~ 122 (243)
T PRK07023 119 ALAQ 122 (243)
T ss_pred HHHH
Confidence 6653
No 224
>PRK07069 short chain dehydrogenase; Validated
Probab=96.18 E-value=0.025 Score=37.17 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=37.9
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccChh-------hhHHHHHHHHHH----HHHHHHHHHH
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNFE-------ASLAQAVLSNVC----ATKEFLELAT 86 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~----gt~~ll~~a~ 86 (93)
+.++.+|+++++ .+..+ ...+|+|||+|+..... ..+...+++|+. ++..++..++
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (251)
T PRK07069 53 AFAAVQDVTDEA------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR 126 (251)
T ss_pred EEEEEeecCCHH------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 446788999864 23322 24689999999976531 123346778887 6677777776
Q ss_pred hc
Q psy17241 87 SF 88 (93)
Q Consensus 87 ~~ 88 (93)
+.
T Consensus 127 ~~ 128 (251)
T PRK07069 127 AS 128 (251)
T ss_pred hc
Confidence 43
No 225
>PRK06484 short chain dehydrogenase; Validated
Probab=96.16 E-value=0.02 Score=41.88 Aligned_cols=63 Identities=10% Similarity=0.161 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++..+.+|+++++- + ...++.+ ...+|++||+|+.... ...++..+.+|+.|+.++++.+..
T Consensus 315 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 315 DEHLSVQADITDEAA-V-ESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred CceeEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 356778999998641 1 1112222 2458999999997531 123345789999999999988765
No 226
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.038 Score=36.71 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=41.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++ .+..+ ...+|++||+|+.... .+.++..+.+|+.|...+++.+.
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (259)
T PRK06125 57 VDVAVHALDLSSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY 124 (259)
T ss_pred CceEEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46888999999863 33332 3568999999997531 12334568899999998888764
No 227
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.10 E-value=0.02 Score=37.51 Aligned_cols=61 Identities=20% Similarity=0.059 Sum_probs=39.9
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.++.+|+++++- + ...+..+ ...+|++||+|+.... ...++..+.+|+.|+..+.+.+..
T Consensus 48 ~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 118 (236)
T PRK06483 48 AQCIQADFSTNAG-I-MAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118 (236)
T ss_pred CEEEEcCCCCHHH-H-HHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence 5788999998641 1 1122222 2358999999986422 233455789999999877766654
No 228
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.041 Score=37.46 Aligned_cols=62 Identities=11% Similarity=0.045 Sum_probs=41.6
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ...+|++||+|+.... ...++..+++|+.|+..+++++.
T Consensus 64 ~~~~~~~~Dv~~~~~-v-~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 64 GEAVANGDDIADWDG-A-ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred CceEEEeCCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 457788999998641 1 1112222 2468999999997532 12344578999999988887775
No 229
>PRK08589 short chain dehydrogenase; Validated
Probab=96.03 E-value=0.034 Score=37.43 Aligned_cols=62 Identities=15% Similarity=0.152 Sum_probs=40.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...++.+ ...+|++||+|+.... ...+...+.+|+.|+..+++.+.
T Consensus 54 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (272)
T PRK08589 54 GKAKAYHVDISDEQQ-V-KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLL 126 (272)
T ss_pred CeEEEEEeecCCHHH-H-HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 468899999998631 1 1112222 2458999999997532 12234467899999987777764
No 230
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.043 Score=41.25 Aligned_cols=58 Identities=7% Similarity=-0.005 Sum_probs=41.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccC---h------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVN---F------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~---~------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++. .++.++ ..+|+|||+|+... + ...+...+.+|+.|+.++++.+.
T Consensus 420 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 493 (657)
T PRK07201 420 GTAHAYTCDLTDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLL 493 (657)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999864 333332 36899999999642 1 12344578999999988877764
No 231
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.034 Score=36.85 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=37.9
Q ss_pred EEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 26 TIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.+|++++. .+..+. ..+|+|||+|+.... ...++..+++|+.|+..+++.+.
T Consensus 54 ~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (255)
T PRK06057 54 LFVPTDVTDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAAL 124 (255)
T ss_pred cEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHH
Confidence 57889999863 333332 367999999987532 12244578899999988877664
No 232
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.91 E-value=0.031 Score=37.14 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=38.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc-------CcCEEEEcCcccCh----------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT-------NVNVIFHTAAIVNF----------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~-------~vd~V~H~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|++++.- + ...+..+.+ +.|++||+|+.... ...++..+++|+.|+..+.+.+
T Consensus 55 ~~v~~~~~Dl~~~~~-v-~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 132 (256)
T TIGR01500 55 LRVVRVSLDLGAEAG-L-EQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV 132 (256)
T ss_pred ceEEEEEeccCCHHH-H-HHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 368889999998631 0 011222221 12589999986421 1233457899999998887766
Q ss_pred Hh
Q psy17241 86 TS 87 (93)
Q Consensus 86 ~~ 87 (93)
..
T Consensus 133 ~~ 134 (256)
T TIGR01500 133 LK 134 (256)
T ss_pred HH
Confidence 53
No 233
>PRK06484 short chain dehydrogenase; Validated
Probab=95.82 E-value=0.042 Score=40.20 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=41.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC-----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN-----F----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++++.- + ...+..+ ...+|++||+|+... + ...++..+++|+.|+..+++++..
T Consensus 51 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (520)
T PRK06484 51 PDHHALAMDVSDEAQ-I-REGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR 125 (520)
T ss_pred CceeEEEeccCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 356789999998641 0 1112222 246899999998732 1 223445789999999999888764
No 234
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=95.80 E-value=0.073 Score=36.23 Aligned_cols=62 Identities=6% Similarity=0.043 Sum_probs=43.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHH---HHhcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLK---LLQTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~---~l~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
..+.++..|++|+.- + +..++ +-...+|++||.|+.... .+.++..+++|+.|..+...+..
T Consensus 53 ~~~~~~~~DVtD~~~-~-~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avL 124 (246)
T COG4221 53 GAALALALDVTDRAA-V-EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVL 124 (246)
T ss_pred CceEEEeeccCCHHH-H-HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 578889999999731 0 11122 224578999999998753 12344578999999999887764
No 235
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.73 E-value=0.066 Score=34.23 Aligned_cols=59 Identities=10% Similarity=0.148 Sum_probs=35.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++ ++..++ ..++.|||+|+.... ...+...+..-+.|+.+|.++...
T Consensus 53 ~~v~~~~~Dv~d~~------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 53 ARVEYVQCDVTDPE------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp -EEEEEE--TTSHH------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceeeeccCccCHH------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 47899999999863 455553 256899999998642 123344678899999999887764
No 236
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.72 E-value=0.042 Score=37.96 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=40.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...+..+ ...+|++||+|+.... ...++..+.+|+.|+..+.+.+.
T Consensus 53 ~~~~~~~~Dl~~~~~-v-~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l 125 (314)
T TIGR01289 53 DSYTIMHLDLGSLDS-V-RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLL 125 (314)
T ss_pred CeEEEEEcCCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 467889999998641 1 1112222 2468999999997431 12334578999999888876654
No 237
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=95.68 E-value=0.13 Score=35.42 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=41.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH----hc---CcCEEEEcCcccChh-------hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL----QT---NVNVIFHTAAIVNFE-------ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l----~~---~vd~V~H~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
-.+.++..|+++++ +.+.+ .. .+|+.|++|+...+. ...++.++.|+.++..|-.+..
T Consensus 56 v~v~vi~~DLs~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~l 127 (265)
T COG0300 56 VEVEVIPADLSDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVL 127 (265)
T ss_pred ceEEEEECcCCChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999985 33333 22 589999999987532 2334578999999877765543
No 238
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.059 Score=35.85 Aligned_cols=62 Identities=5% Similarity=-0.035 Sum_probs=38.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...++.+ ...+|++||+|+.... ...+...+.+|+.|...+.+.+.
T Consensus 59 ~~~~~~~~D~~~~~~-v-~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 130 (265)
T PRK07062 59 ARLLAARCDVLDEAD-V-AAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFL 130 (265)
T ss_pred ceEEEEEecCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 367889999998631 1 0111222 2468999999997532 12334467889888777766653
No 239
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.50 E-value=0.093 Score=35.49 Aligned_cols=61 Identities=11% Similarity=0.143 Sum_probs=40.6
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..++.+|++++.- + +..+..+. ..+|++||+|+.... ...+...+++|+.|+..+++.+..
T Consensus 62 ~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 136 (272)
T PRK08159 62 FVAGHCDVTDEAS-I-DAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK 136 (272)
T ss_pred ceEEecCCCCHHH-H-HHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5578999998641 1 11222222 358999999997531 123445789999999999888764
No 240
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.50 E-value=0.059 Score=36.02 Aligned_cols=61 Identities=11% Similarity=0.112 Sum_probs=40.1
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..++.+|+++++- + +..++.+ ...+|++||+|+.... .+.+...+++|+.|+..+.+.+..
T Consensus 62 ~~~~~~D~~~~~~-v-~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p 136 (258)
T PRK07533 62 PIFLPLDVREPGQ-L-EAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEP 136 (258)
T ss_pred ceEEecCcCCHHH-H-HHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4578899998641 1 1112222 2468999999986431 123445789999999999887753
No 241
>PLN00106 malate dehydrogenase
Probab=95.40 E-value=0.043 Score=38.69 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=37.3
Q ss_pred HHHHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 44 LKLLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 44 ~~~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+.+.+.++|+|+|+|+.... ..+..+.+..|+..+.++.+.+.+.+
T Consensus 80 ~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~ 126 (323)
T PLN00106 80 LGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC 126 (323)
T ss_pred HHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 45567899999999998654 45566688999999999999987653
No 242
>KOG1372|consensus
Probab=95.35 E-value=0.0045 Score=42.65 Aligned_cols=61 Identities=15% Similarity=0.198 Sum_probs=45.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccChhhhHH---HHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNFEASLA---QAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~~~~~~---~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
....+..||++|.. -+..++. +.+-|||+||.+++.-++. -+-++...||+.||++.+.|+
T Consensus 83 ~~mkLHYgDmTDss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 83 ASMKLHYGDMTDSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred ceeEEeeccccchH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence 46788999999964 3555554 4689999999987543332 244678889999999998875
No 243
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.30 E-value=0.11 Score=39.85 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=38.6
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++.++.+|++++. .+..++ .++|+|||+|+.... ...+...+++|+.|...+...+.
T Consensus 466 ~~~~v~~Dvtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al 536 (676)
T TIGR02632 466 RAVALKMDVTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF 536 (676)
T ss_pred cEEEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999863 343333 368999999997542 12233467889998877765443
No 244
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.21 E-value=0.14 Score=34.10 Aligned_cols=62 Identities=18% Similarity=0.067 Sum_probs=37.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC---------h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN---------F----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~---------~----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|+++++- + ...+..+ ...+|++||+|+... + ...+...+.+|+.+...+.+.+.
T Consensus 59 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 136 (260)
T PRK08416 59 IKAKAYPLNILEPET-Y-KELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAA 136 (260)
T ss_pred CceEEEEcCCCCHHH-H-HHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 468899999998641 1 1112222 236899999997532 1 12223467888888776655553
No 245
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.16 E-value=0.081 Score=35.90 Aligned_cols=60 Identities=17% Similarity=0.121 Sum_probs=39.5
Q ss_pred EEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 26 TIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.+|++|++- + ...++.+ ...+|++||+|+.... ...++..+++|+.|+..+.+.+..
T Consensus 58 ~~~~~Dv~d~~~-v-~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 131 (274)
T PRK08415 58 YVYELDVSKPEH-F-KSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLP 131 (274)
T ss_pred eEEEecCCCHHH-H-HHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 578899998741 1 1122222 2468999999996421 123345789999999988887753
No 246
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.14 Score=34.12 Aligned_cols=62 Identities=15% Similarity=0.026 Sum_probs=38.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccChh----hh---HHHHHHHHHHHHHHH----HHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNFE----AS---LAQAVLSNVCATKEF----LELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~~----~~---~~~~~~~Nv~gt~~l----l~~a~~ 87 (93)
+++++.+|++++.- + ...++.+. .++|++||+|+..... .+ ..+.+++|+.|+..+ ++.+++
T Consensus 61 ~v~~~~~D~~~~~~-~-~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~ 135 (253)
T PRK07904 61 SVEVIDFDALDTDS-H-PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA 135 (253)
T ss_pred ceEEEEecCCChHH-H-HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 68899999998641 1 11233333 3689999999875321 11 123579999998764 444443
No 247
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=95.11 E-value=0.034 Score=37.19 Aligned_cols=43 Identities=23% Similarity=0.390 Sum_probs=27.4
Q ss_pred HHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 44 LKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 44 ~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.....++|+|||+||.+++.. ....-..+...+.++.+++++
T Consensus 75 l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 75 LEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred HHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 3444568999999999987532 221123456666777777764
No 248
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.10 E-value=0.14 Score=34.37 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=39.0
Q ss_pred EEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh------------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 26 TIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF------------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.+|+++++- + ...++.+ ...+|++||+|+.... ...++..+++|+.|+..+.+.+..
T Consensus 59 ~~~~~Dv~d~~~-v-~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp 133 (260)
T PRK06997 59 LVFPCDVASDEQ-I-DALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALP 133 (260)
T ss_pred ceeeccCCCHHH-H-HHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 467899998741 1 1112222 2468999999987531 122334688999999988887753
No 249
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.07 E-value=0.13 Score=34.15 Aligned_cols=61 Identities=20% Similarity=0.122 Sum_probs=39.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 85 (93)
.++.++.+|+++++- + ...+..+ ...+|+|||.|+.... .+.++..+++|+.|...+...+
T Consensus 68 ~~~~~~~~D~~~~~~-i-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 138 (256)
T PRK12859 68 VKVSSMELDLTQNDA-P-KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQF 138 (256)
T ss_pred CeEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 468889999998641 1 1112222 2357999999997532 1123446889999988886544
No 250
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.98 E-value=0.16 Score=33.92 Aligned_cols=61 Identities=10% Similarity=0.139 Sum_probs=39.8
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC-------h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN-------F----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++.++.+|+++++- + ...++.+ ...+|++||+|+... + .+.+...+++|+.|+..+.+.+.
T Consensus 58 ~~~~~~~Dv~~~~~-i-~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 58 PAPVLELDVTNEEH-L-ASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred CCcEEeCCCCCHHH-H-HHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 56789999998741 1 1112222 246899999999752 1 12233468999999988887765
No 251
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.97 E-value=0.11 Score=34.51 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=41.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + +..++.+ ...+|++||+|+.... ...++..+++|+.|...+.+.+..
T Consensus 55 ~~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~ 131 (252)
T PRK06079 55 EEDLLVECDVASDES-I-ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP 131 (252)
T ss_pred CceeEEeCCCCCHHH-H-HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence 357789999998641 1 1122222 2468999999997531 122344678999999888877753
No 252
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.14 Score=34.53 Aligned_cols=59 Identities=10% Similarity=0.189 Sum_probs=38.6
Q ss_pred EEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 26 TIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.+|+++++- + +..++.+ ...+|++||+|+.... ...+...+.+|+.|+.++++.+.
T Consensus 60 ~~~~~Dv~d~~~-v-~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 60 FVLPCDVEDIAS-V-DAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred eEEeCCCCCHHH-H-HHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 468899998641 1 1122222 2468999999996521 12334468899999999888765
No 253
>PRK08017 oxidoreductase; Provisional
Probab=94.80 E-value=0.21 Score=32.87 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=36.6
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLEL 84 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~ 84 (93)
+++++.+|+++..- + ...++.+. ..+|.|+|+|+.... ...++..+++|+.|+.++.+.
T Consensus 46 ~~~~~~~D~~~~~~-~-~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~ 115 (256)
T PRK08017 46 GFTGILLDLDDPES-V-ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115 (256)
T ss_pred CCeEEEeecCCHHH-H-HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 46788899987531 1 11122221 357999999996432 123345789999998876433
No 254
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.64 E-value=0.076 Score=35.51 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=39.9
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC-------h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN-------F----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+.++.+|+++++- + ...++.+ ...+|++||+|+... + ...++..+++|+.|+..+.+.+.
T Consensus 60 ~~~~~~~Dl~d~~~-v-~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 60 PSLFLPCDVQDDAQ-I-EETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred cceEeecCcCCHHH-H-HHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 46688999998641 1 1112222 246899999999652 1 12234478899999998888765
No 255
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.57 E-value=0.22 Score=33.57 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=38.9
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh------------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF------------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
...++.+|+++++- + +..+..+. ..+|++||+|+.... ...++..+++|+.|...+.+.+..
T Consensus 57 ~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 133 (262)
T PRK07984 57 SDIVLPCDVAEDAS-I-DAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133 (262)
T ss_pred CceEeecCCCCHHH-H-HHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 45678899998641 1 11122222 357999999986421 112334678899998888777643
No 256
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.53 E-value=0.32 Score=32.50 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=40.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccCh--------h---hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNF--------E---ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|+++++- + +..++.+. ..+|+++|+|+.... . ..+...+++|+.++..+.+.+..
T Consensus 59 ~~~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (257)
T PRK08594 59 QESLLLPCDVTSDEE-I-TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKK 135 (257)
T ss_pred CceEEEecCCCCHHH-H-HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 467889999998741 1 11222322 458999999986421 1 12233678899998888777653
No 257
>PTZ00325 malate dehydrogenase; Provisional
Probab=94.45 E-value=0.14 Score=36.14 Aligned_cols=45 Identities=7% Similarity=0.066 Sum_probs=35.9
Q ss_pred HHHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 45 KLLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 45 ~~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+.++++|+|+|+|+...- ..+..+.+..|+.++.++++..++.+
T Consensus 71 ~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~ 116 (321)
T PTZ00325 71 EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA 116 (321)
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4456899999999998653 34556678999999999999987753
No 258
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.44 E-value=0.3 Score=32.68 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=37.8
Q ss_pred EEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh--------h----hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 25 VTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF--------E----ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~--------~----~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
...+.+|+++++- + +..++.+ ...+|++||+|+.... . ..++..+.+|+.|+..+.+.+.
T Consensus 58 ~~~~~~Dv~~~~~-v-~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (261)
T PRK08690 58 ELVFRCDVASDDE-I-NQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAAR 132 (261)
T ss_pred ceEEECCCCCHHH-H-HHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHH
Confidence 4578999998641 1 1112222 2468999999997632 1 1223357889999888877654
No 259
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=94.44 E-value=0.21 Score=43.73 Aligned_cols=63 Identities=11% Similarity=0.127 Sum_probs=43.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.++.+|++|..- + ...+..+. ..+|.|||.|+.... ...+...+.+|+.|+.++++.+..
T Consensus 2094 ~~v~y~~~DVtD~~a-v-~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~ 2165 (2582)
T TIGR02813 2094 ASAEYASADVTNSVS-V-AATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNA 2165 (2582)
T ss_pred CcEEEEEccCCCHHH-H-HHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999998641 1 11122221 258999999997532 234455789999999999998865
No 260
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.35 E-value=0.29 Score=32.52 Aligned_cols=55 Identities=25% Similarity=0.287 Sum_probs=34.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh------h---hhHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF------E---ASLAQAVLSNVCATKEFLEL 84 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~------~---~~~~~~~~~Nv~gt~~ll~~ 84 (93)
++.++.+|+++++ .++.+ ...+|+|||+|+.... . ..+...+.+|+.++..+...
T Consensus 49 ~~~~~~~Dv~d~~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 119 (259)
T PRK08340 49 EVYAVKADLSDKD------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119 (259)
T ss_pred CceEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHH
Confidence 5788999999864 23332 2468999999996431 1 12223467788776555443
No 261
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.05 E-value=0.14 Score=33.63 Aligned_cols=51 Identities=18% Similarity=0.268 Sum_probs=35.0
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++++.+|+.++ +.+...++++|.||.+-+.... .-.....+++++|++.+
T Consensus 44 g~~vv~~d~~~~------~~l~~al~g~d~v~~~~~~~~~---------~~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 44 GAEVVEADYDDP------ESLVAALKGVDAVFSVTPPSHP---------SELEQQKNLIDAAKAAG 94 (233)
T ss_dssp TTEEEES-TT-H------HHHHHHHTTCSEEEEESSCSCC---------CHHHHHHHHHHHHHHHT
T ss_pred cceEeecccCCH------HHHHHHHcCCceEEeecCcchh---------hhhhhhhhHHHhhhccc
Confidence 567889999975 4688889999999988876651 11222456777887765
No 262
>PRK06924 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.16 Score=33.41 Aligned_cols=58 Identities=19% Similarity=0.094 Sum_probs=36.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcC---------c--CEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTN---------V--NVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLE 83 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~---------v--d~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~ 83 (93)
.++.++.+|+++++ +++.+.+. . .+++|+|+.... ...+...+++|+.|+..+++
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 121 (251)
T PRK06924 48 SNLTFHSLDLQDVH------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121 (251)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHH
Confidence 46889999999864 33333221 1 278999987532 12334467889999776666
Q ss_pred HHH
Q psy17241 84 LAT 86 (93)
Q Consensus 84 ~a~ 86 (93)
.+.
T Consensus 122 ~~~ 124 (251)
T PRK06924 122 TFM 124 (251)
T ss_pred HHH
Confidence 554
No 263
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.82 E-value=0.44 Score=31.84 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=38.0
Q ss_pred EEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccC-------h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 26 TIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVN-------F----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.+|+++++- + +..++.+ ...+|+++|.|+... + ...+...+++|+.|...+++.+.
T Consensus 61 ~~~~~Dv~~~~~-v-~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (260)
T PRK06603 61 FVSELDVTNPKS-I-SNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAE 133 (260)
T ss_pred eEEEccCCCHHH-H-HHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899998741 1 1122222 245899999998642 1 12334578999999998888764
No 264
>KOG2774|consensus
Probab=93.62 E-value=0.0076 Score=41.33 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=41.4
Q ss_pred EEEeccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccCh-h-hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 26 TIICGDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNF-E-ASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~-~-~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
-++..|+.|.. .++++. +.+|..||..|..+. . .+......+|+.|..|+++.|.+.+
T Consensus 90 PyIy~DILD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k 151 (366)
T KOG2774|consen 90 PYIYLDILDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK 151 (366)
T ss_pred Cchhhhhhccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC
Confidence 36677887754 345543 568999999887653 2 2333457899999999999998763
No 265
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.50 E-value=0.24 Score=34.85 Aligned_cols=46 Identities=17% Similarity=0.067 Sum_probs=34.3
Q ss_pred HHHHHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 43 NLKLLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 43 ~~~~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++.+.++++|+|||+|+.... ..+..+.++.|+.-...+.....+.
T Consensus 71 ~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 71 DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556899999999998764 3444567899999888887666554
No 266
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.48 E-value=0.32 Score=31.61 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=39.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHH---HhcCcCEEEEcCcccCh---h--hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 24 KVTIICGDCSKKKLGISDENLKL---LQTNVNVIFHTAAIVNF---E--ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~---l~~~vd~V~H~Aa~~~~---~--~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.++.+|+++++- + ...++. ....+|.|+|+++.... . ..+...++.|+.+...+++.+..
T Consensus 54 ~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (238)
T PRK05786 54 NIHYVVGDVSSTES-A-RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR 123 (238)
T ss_pred CeEEEECCCCCHHH-H-HHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 68899999998641 1 111111 12457999999985431 1 22234678999998888887764
No 267
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.48 E-value=0.45 Score=33.13 Aligned_cols=59 Identities=22% Similarity=0.254 Sum_probs=38.5
Q ss_pred CEEEEeccCCCCCCCCCHHHHH---HHhc--CcCEEEEcCcccCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLK---LLQT--NVNVIFHTAAIVNF---------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~---~l~~--~vd~V~H~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++..+.+|+++. + .+.++ +... ++|++||+|+.... .+..+..+++|+.|+..+.+.+.
T Consensus 105 ~~~~~~~Dl~~~---~-~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l 177 (320)
T PLN02780 105 QIKTVVVDFSGD---I-DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVL 177 (320)
T ss_pred EEEEEEEECCCC---c-HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 577788899852 1 12222 2233 35699999997521 12234478999999999988875
No 268
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=93.23 E-value=0.55 Score=30.87 Aligned_cols=55 Identities=18% Similarity=0.198 Sum_probs=39.6
Q ss_pred EEeccCCCCCCCCCHHHHHHH-------h-cCcCEEEEcCcccCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 27 IICGDCSKKKLGISDENLKLL-------Q-TNVNVIFHTAAIVNF-----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 27 ~v~gDl~~~~~gl~~~~~~~l-------~-~~vd~V~H~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
++.+|++++. .++.+ . ..+|+++|+|+.... ...+...+.+|+.++..+++.+..
T Consensus 48 ~~~~D~~~~~------~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 48 VIQCDLSDEE------SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp EEESCTTSHH------HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEeecCcchH------HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999863 34333 3 578999999987653 123344788999999999888754
No 269
>PLN00016 RNA-binding protein; Provisional
Probab=92.58 E-value=0.2 Score=35.46 Aligned_cols=46 Identities=17% Similarity=0.288 Sum_probs=31.2
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+++++.||+.+.. ..+ ...++|+|||+++. +..++.+++++|++.+
T Consensus 111 ~v~~v~~D~~d~~-----~~~--~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~g 156 (378)
T PLN00016 111 GVKTVWGDPADVK-----SKV--AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSPG 156 (378)
T ss_pred CceEEEecHHHHH-----hhh--ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHcC
Confidence 4888999987621 111 12578999999763 2346788999998653
No 270
>PRK08862 short chain dehydrogenase; Provisional
Probab=92.57 E-value=0.97 Score=29.78 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=36.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---c-CcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---T-NVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~-~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++..+.+|+++++- + +..+..+. . .+|++||+|+.... ...+...+.+|+.++..+.+.+.
T Consensus 54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T PRK08862 54 DNVYSFQLKDFSQES-I-RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA 127 (227)
T ss_pred CCeEEEEccCCCHHH-H-HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 356778889988641 1 11122222 3 68999999974321 12223356778888777665543
No 271
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=92.04 E-value=0.45 Score=32.07 Aligned_cols=51 Identities=12% Similarity=0.073 Sum_probs=34.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh------cC-cCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ------TN-VNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~------~~-vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.+++.+.+|+.|++ .+..++ .+ +|.|||+++..... ...+.+++++|++.+
T Consensus 39 ~~~~~~~~d~~d~~------~l~~a~~~~~~~~g~~d~v~~~~~~~~~~----------~~~~~~~i~aa~~~g 96 (285)
T TIGR03649 39 PNEKHVKFDWLDED------TWDNPFSSDDGMEPEISAVYLVAPPIPDL----------APPMIKFIDFARSKG 96 (285)
T ss_pred CCCccccccCCCHH------HHHHHHhcccCcCCceeEEEEeCCCCCCh----------hHHHHHHHHHHHHcC
Confidence 45677889999874 466655 56 99999998754210 123457788887663
No 272
>KOG4169|consensus
Probab=91.88 E-value=0.37 Score=32.88 Aligned_cols=57 Identities=11% Similarity=0.239 Sum_probs=40.0
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEF 81 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~l 81 (93)
...+.|+.+|+++.. ++ +..++++. ..+|++|+-|+..+ ..+++.++.+|+.|..|=
T Consensus 54 ~~~v~F~~~DVt~~~-~~-~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~ 113 (261)
T KOG4169|consen 54 SVSVIFIKCDVTNRG-DL-EAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVING 113 (261)
T ss_pred CceEEEEEeccccHH-HH-HHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhh
Confidence 357899999999842 22 22334433 46799999999987 455777888998876554
No 273
>PRK05599 hypothetical protein; Provisional
Probab=91.87 E-value=1.4 Score=29.21 Aligned_cols=60 Identities=12% Similarity=0.097 Sum_probs=36.9
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccChhh-------hHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNFEA-------SLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~~~-------~~~~~~~~Nv~gt~~ll~~a 85 (93)
++.++.+|++|++- + +..++.+ ...+|++||+|+...... ...+.+.+|+.+...++..+
T Consensus 50 ~~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 50 SVHVLSFDAQDLDT-H-RELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred ceEEEEcccCCHHH-H-HHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence 57889999999742 1 1112222 246899999999764211 11234667888877665544
No 274
>KOG1201|consensus
Probab=91.43 E-value=1.1 Score=31.37 Aligned_cols=55 Identities=16% Similarity=0.159 Sum_probs=38.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLEL 84 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~ 84 (93)
++..+.+|+++.+ ++..+ ..++|++++.||.+.. .+..+..+++|+.|.....++
T Consensus 87 ~~~~y~cdis~~e------ei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~ka 155 (300)
T KOG1201|consen 87 EAKAYTCDISDRE------EIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKA 155 (300)
T ss_pred ceeEEEecCCCHH------HHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHH
Confidence 6888999999864 33322 3578999999999753 233345789999997654443
No 275
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.03 E-value=1.4 Score=30.46 Aligned_cols=62 Identities=3% Similarity=-0.083 Sum_probs=38.1
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcC-ccc-------Chh----hhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTA-AIV-------NFE----ASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~A-a~~-------~~~----~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++.++.+|++++.- + ...++.+. ..+|++||+| +.. .+. ..+...+++|+.|+..+.+.+.
T Consensus 67 ~~~~~~~~Dv~~~~~-v-~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 67 GRGIAVQVDHLVPEQ-V-RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred CceEEEEcCCCCHHH-H-HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357789999998641 1 11122222 3689999999 632 111 1223467889999888877665
No 276
>KOG1431|consensus
Probab=90.83 E-value=0.18 Score=34.60 Aligned_cols=54 Identities=19% Similarity=0.189 Sum_probs=37.9
Q ss_pred ccCCCCCCCCCHHHHHHHh--cCcCEEEEcCcccCh----hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 30 GDCSKKKLGISDENLKLLQ--TNVNVIFHTAAIVNF----EASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 30 gDl~~~~~gl~~~~~~~l~--~~vd~V~H~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
+|+++. ++.+.+. .+..+|||+||.+.- ....-+++..|+.---|+|..|-+.+
T Consensus 39 ~DLt~~------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g 98 (315)
T KOG1431|consen 39 ADLTNL------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG 98 (315)
T ss_pred ccccch------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc
Confidence 466653 3455554 457899999999862 22234688999998889998887754
No 277
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.53 E-value=1 Score=31.74 Aligned_cols=44 Identities=18% Similarity=0.009 Sum_probs=33.8
Q ss_pred HHHhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 45 KLLQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 45 ~~l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
.+.++++|+|+|+|+... ...+..+.+..|+.-.+.+.....+.
T Consensus 71 ~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 71 EEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred HHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 344689999999999865 34455567889999999888777665
No 278
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=89.18 E-value=2.1 Score=29.83 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=27.9
Q ss_pred cCcCEEEEcCccc----C-h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 49 TNVNVIFHTAAIV----N-F----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 49 ~~vd~V~H~Aa~~----~-~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..+|++||+|+.. . + ...+...+++|+.|...+.+.+..
T Consensus 119 G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p 166 (303)
T PLN02730 119 GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166 (303)
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4589999999642 1 1 123445789999999988887754
No 279
>KOG1210|consensus
Probab=88.77 E-value=1.2 Score=31.57 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=40.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh----h---hhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF----E---ASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.++.+..+|+.|.+- -+..++++ ...+|.+||||+..-. . ...+..+++|..||.|++.++..
T Consensus 84 ~~v~~~S~d~~~Y~~--v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~ 156 (331)
T KOG1210|consen 84 EDVSYKSVDVIDYDS--VSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAAR 156 (331)
T ss_pred ceeeEeccccccHHH--HHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 347788899965421 01112222 2357999999997532 1 22234789999999999988764
No 280
>KOG2865|consensus
Probab=88.75 E-value=0.77 Score=32.56 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=44.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
..+-+...|+.|+ +.++.+.+...+||++-+.--...++ .+.++|+.+...+...|++.+
T Consensus 109 GQvl~~~fd~~De------dSIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~G 168 (391)
T KOG2865|consen 109 GQVLFMKFDLRDE------DSIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEAG 168 (391)
T ss_pred cceeeeccCCCCH------HHHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhhC
Confidence 4566777777775 46888888899999998863222222 256789999999999999875
No 281
>PRK09620 hypothetical protein; Provisional
Probab=88.40 E-value=0.47 Score=31.83 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=15.8
Q ss_pred HHHHh--cCcCEEEEcCcccChh
Q psy17241 44 LKLLQ--TNVNVIFHTAAIVNFE 64 (93)
Q Consensus 44 ~~~l~--~~vd~V~H~Aa~~~~~ 64 (93)
+.+++ .++|+|||+||..++.
T Consensus 79 l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 79 MKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHhcccCCCEEEECcccccee
Confidence 44445 3689999999998764
No 282
>KOG1200|consensus
Probab=88.28 E-value=1.9 Score=29.03 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=40.6
Q ss_pred EEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 26 TIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 26 ~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
.-+.+|++++.- . ...+++. +..++++++||+.+.- .+.+.+.+.+|+.|+..+-+++.+
T Consensus 65 ~aF~~DVS~a~~-v-~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r 134 (256)
T KOG1200|consen 65 SAFSCDVSKAHD-V-QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR 134 (256)
T ss_pred ceeeeccCcHHH-H-HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH
Confidence 345889988641 0 0112222 3468999999999851 345566889999999888887754
No 283
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=87.75 E-value=1.6 Score=30.96 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=27.2
Q ss_pred CCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 21 FLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
...++.++..|+.++ +.+.++++++|+|+||+++.
T Consensus 44 ~~~~~~~~~~d~~~~------~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 44 LGDRVEAVQVDVNDP------ESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp TTTTEEEEE--TTTH------HHHHHHHTTSSEEEE-SSGG
T ss_pred cccceeEEEEecCCH------HHHHHHHhcCCEEEECCccc
Confidence 346899999999986 35888899999999999987
No 284
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.15 E-value=3.2 Score=28.82 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=28.5
Q ss_pred cCcCEEEEcCcccC-----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 49 TNVNVIFHTAAIVN-----F----EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 49 ~~vd~V~H~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
..+|++||+|+... + ...++..+++|+.|+.++.+++..
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46899999997531 2 123345789999999999888764
No 285
>KOG1199|consensus
Probab=86.18 E-value=0.17 Score=33.37 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=41.2
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHh-------cCcCEEEEcCcccC------h-------hhhHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQ-------TNVNVIFHTAAIVN------F-------EASLAQAVLSNVCATKEF 81 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~-------~~vd~V~H~Aa~~~------~-------~~~~~~~~~~Nv~gt~~l 81 (93)
..++.|...|++.. ++.+..+ ...|..++||+..- + .+.++..+++|+.||.|+
T Consensus 54 g~~~vf~padvtse------kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnv 127 (260)
T KOG1199|consen 54 GGKVVFTPADVTSE------KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNV 127 (260)
T ss_pred CCceEEeccccCcH------HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeee
Confidence 46899999999964 3443332 35799999999752 1 123344678999999999
Q ss_pred HHHHH
Q psy17241 82 LELAT 86 (93)
Q Consensus 82 l~~a~ 86 (93)
++...
T Consensus 128 irl~a 132 (260)
T KOG1199|consen 128 IRLGA 132 (260)
T ss_pred eeehh
Confidence 87653
No 286
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=85.58 E-value=3.2 Score=29.07 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=29.4
Q ss_pred CcCEEEEcCcccC----hhhhHH-HHHHHHHHHHHHHHHHHHhc
Q psy17241 50 NVNVIFHTAAIVN----FEASLA-QAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 50 ~vd~V~H~Aa~~~----~~~~~~-~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++|+|||+|+..= +....+ ...+.=+.+|..|.++..+.
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~ 99 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS 99 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 7999999999763 333333 36778899999999988754
No 287
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=83.11 E-value=3.8 Score=28.91 Aligned_cols=43 Identities=19% Similarity=0.047 Sum_probs=33.0
Q ss_pred HHhcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 46 LLQTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 46 ~l~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.+.++|+|+|+|+...- ..+..+.+..|+.-.+.+.+...+.
T Consensus 71 ~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 71 VAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred HHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 446899999999998654 3345567889999988888777664
No 288
>KOG1610|consensus
Probab=83.04 E-value=6.6 Score=27.92 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=39.4
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc---------CcCEEEEcCcccCh--------hhhHHHHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT---------NVNVIFHTAAIVNF--------EASLAQAVLSNVCATKEFLEL 84 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~---------~vd~V~H~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~ 84 (93)
.++..-+.-|+++++ .++++.+ +-=.|+|.|+...+ .+.++..+++|+.|+..+-..
T Consensus 75 s~rl~t~~LDVT~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~ 148 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKA 148 (322)
T ss_pred CCcceeEeeccCCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHH
Confidence 578888899999874 3433321 33589999996643 234455789999998776544
Q ss_pred H
Q psy17241 85 A 85 (93)
Q Consensus 85 a 85 (93)
.
T Consensus 149 ~ 149 (322)
T KOG1610|consen 149 F 149 (322)
T ss_pred H
Confidence 3
No 289
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=78.90 E-value=3.4 Score=27.54 Aligned_cols=15 Identities=13% Similarity=0.592 Sum_probs=12.3
Q ss_pred cCcCEEEEcCcccCh
Q psy17241 49 TNVNVIFHTAAIVNF 63 (93)
Q Consensus 49 ~~vd~V~H~Aa~~~~ 63 (93)
..+|++||+||...+
T Consensus 79 g~iDiLVnnAgv~d~ 93 (227)
T TIGR02114 79 QEHDILIHSMAVSDY 93 (227)
T ss_pred CCCCEEEECCEeccc
Confidence 568999999997653
No 290
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=78.62 E-value=16 Score=23.85 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=39.5
Q ss_pred CCEEEEeccCCC-CCCCCCHHHHHHH---hcCcCEEEEcCcccC----h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSK-KKLGISDENLKLL---QTNVNVIFHTAAIVN----F----EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~-~~~gl~~~~~~~l---~~~vd~V~H~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
..+.+...|+++ +.- + ...+..+ ...+|+++|.|+... + ...++..+.+|+.|...+.+.+.
T Consensus 57 ~~~~~~~~Dvs~~~~~-v-~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 130 (251)
T COG1028 57 GRAAAVAADVSDDEES-V-EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAAL 130 (251)
T ss_pred CcEEEEEecCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 367788899997 321 0 1112222 235899999999752 2 12334578999999988887443
No 291
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=76.43 E-value=2.5 Score=27.49 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=12.9
Q ss_pred HHHhcCcCEEEEcCcccChh
Q psy17241 45 KLLQTNVNVIFHTAAIVNFE 64 (93)
Q Consensus 45 ~~l~~~vd~V~H~Aa~~~~~ 64 (93)
...+.+.|++||+||..++.
T Consensus 77 ~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 77 KELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHGGGGSEEEE-SB--SEE
T ss_pred ccccCcceeEEEecchhhee
Confidence 34456789999999999863
No 292
>KOG1208|consensus
Probab=75.90 E-value=8.1 Score=27.23 Aligned_cols=64 Identities=20% Similarity=0.154 Sum_probs=40.4
Q ss_pred CCCEEEEeccCCCCCCCCC-HHHHHHHhcCcCEEEEcCcccChh-----hhHHHHHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGIS-DENLKLLQTNVNVIFHTAAIVNFE-----ASLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~-~~~~~~l~~~vd~V~H~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a 85 (93)
...+.++++|+++..--.. .+.+.......|+.|+.||..... +.++..+.+|..|...|.++.
T Consensus 85 ~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lL 154 (314)
T KOG1208|consen 85 NQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELL 154 (314)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHH
Confidence 4678899999998641000 011112224569999999987542 234557889999976665544
No 293
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=74.56 E-value=25 Score=24.22 Aligned_cols=79 Identities=9% Similarity=0.098 Sum_probs=42.3
Q ss_pred chhHHHHHHHhhCCCCCCCEEEEeccCCCCCCCCCH--HHHHHHhcCcCEEEEcCcccCh--------h---hhHHHHHH
Q psy17241 6 GANMIFDKLKQEQPGFLSKVTIICGDCSKKKLGISD--ENLKLLQTNVNVIFHTAAIVNF--------E---ASLAQAVL 72 (93)
Q Consensus 6 ~~~~~~d~~~~~~~~~~~~v~~v~gDl~~~~~gl~~--~~~~~l~~~vd~V~H~Aa~~~~--------~---~~~~~~~~ 72 (93)
..+++..|.++..+.. ....++++|+++..- ++. +++.+-+.+.|.++|+-|...- . +.+...+.
T Consensus 40 ~~e~l~krv~~la~~~-~s~~v~~cDV~~d~~-i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~ 117 (259)
T COG0623 40 QGERLEKRVEELAEEL-GSDLVLPCDVTNDES-IDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117 (259)
T ss_pred ccHHHHHHHHHHHhhc-cCCeEEecCCCCHHH-HHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhh
Confidence 3455556655544322 224568999997531 110 1122224578999999998752 1 11122455
Q ss_pred HHHHHHHHHHHHHH
Q psy17241 73 SNVCATKEFLELAT 86 (93)
Q Consensus 73 ~Nv~gt~~ll~~a~ 86 (93)
+...+...+.+.|+
T Consensus 118 IS~YS~~~lak~a~ 131 (259)
T COG0623 118 ISAYSFTALAKAAR 131 (259)
T ss_pred hhHhhHHHHHHHHH
Confidence 55555555655554
No 294
>cd02905 Macro_GDAP2_like Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family contains proteins similar to human GDAP2, the ganglioside induced differentiation associated protein 2, whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal
Probab=73.32 E-value=8.3 Score=23.86 Aligned_cols=43 Identities=21% Similarity=0.145 Sum_probs=22.6
Q ss_pred CcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy17241 50 NVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFGELET 93 (93)
Q Consensus 50 ~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 93 (93)
.+.+|||.+++.-.........+.=-...++.|+.|.+. +++|
T Consensus 68 ~~k~VIH~vgP~~~~~~~~~~~~~L~~~~~~~L~~a~~~-~~~S 110 (140)
T cd02905 68 PARFIIHTVGPKYNVKYRTAAENALYSCYRNVLQLAKEL-GLES 110 (140)
T ss_pred CccEEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHc-CCCE
Confidence 468999999876322111111111112357778888664 3443
No 295
>KOG1611|consensus
Probab=72.75 E-value=7.4 Score=26.63 Aligned_cols=64 Identities=17% Similarity=0.155 Sum_probs=41.2
Q ss_pred CCCCEEEEeccCCCCCCCCCH--HHHHHH--hcCcCEEEEcCcccChh----h----hHHHHHHHHHHHHHHHHHHH
Q psy17241 21 FLSKVTIICGDCSKKKLGISD--ENLKLL--QTNVNVIFHTAAIVNFE----A----SLAQAVLSNVCATKEFLELA 85 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~--~~~~~l--~~~vd~V~H~Aa~~~~~----~----~~~~~~~~Nv~gt~~ll~~a 85 (93)
..+++++++.|++..+- +.. .+.+.+ .++.++.++.||..... . .+-+.+++|+.|...+.+.+
T Consensus 52 ~d~rvHii~Ldvt~deS-~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 52 SDSRVHIIQLDVTCDES-IDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred cCCceEEEEEecccHHH-HHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence 35799999999986531 111 122333 35679999999986421 1 22236799999988776654
No 296
>PRK05086 malate dehydrogenase; Provisional
Probab=72.61 E-value=13 Score=25.97 Aligned_cols=46 Identities=11% Similarity=0.080 Sum_probs=34.7
Q ss_pred HHHHHhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 43 NLKLLQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 43 ~~~~l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++.+.++++|+||-+|+... ...+..+.+..|...+.++++...+.
T Consensus 62 d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~ 108 (312)
T PRK05086 62 DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT 108 (312)
T ss_pred CHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344578999999999854 33344567899999999999888765
No 297
>KOG0725|consensus
Probab=72.27 E-value=12 Score=25.65 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=40.2
Q ss_pred CCCEEEEeccCCCCCCC--CCHHHHHHHhcCcCEEEEcCcccChh--------hhHHHHHHHHHHH-HHHHHHHHHh
Q psy17241 22 LSKVTIICGDCSKKKLG--ISDENLKLLQTNVNVIFHTAAIVNFE--------ASLAQAVLSNVCA-TKEFLELATS 87 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~g--l~~~~~~~l~~~vd~V~H~Aa~~~~~--------~~~~~~~~~Nv~g-t~~ll~~a~~ 87 (93)
.+++..+.+|+++..-- +-+...+......|++++.|+..... +.+...+.+|+.| +.++...+..
T Consensus 59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~ 135 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARP 135 (270)
T ss_pred CCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHH
Confidence 45788999999965210 00011112134689999999986522 2233478999995 6666666653
No 298
>PRK06720 hypothetical protein; Provisional
Probab=70.70 E-value=8.7 Score=24.35 Aligned_cols=34 Identities=12% Similarity=0.333 Sum_probs=23.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHH-------hcCcCEEEEcCcccC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLL-------QTNVNVIFHTAAIVN 62 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l-------~~~vd~V~H~Aa~~~ 62 (93)
.+..++.+|++++. ++..+ ...+|++||+|+...
T Consensus 65 ~~~~~~~~Dl~~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 65 GEALFVSYDMEKQG------DWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 45678899999763 23322 246899999999754
No 299
>KOG2733|consensus
Probab=66.92 E-value=14 Score=27.11 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=29.1
Q ss_pred CCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccCh
Q psy17241 21 FLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNF 63 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~ 63 (93)
....+ ++.+|.+++ +.+.++.+.+-+|++|+++..+
T Consensus 61 ls~~~-i~i~D~~n~------~Sl~emak~~~vivN~vGPyR~ 96 (423)
T KOG2733|consen 61 LSSSV-ILIADSANE------ASLDEMAKQARVIVNCVGPYRF 96 (423)
T ss_pred cccce-EEEecCCCH------HHHHHHHhhhEEEEecccccee
Confidence 34455 888999986 4688888999999999999764
No 300
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=66.01 E-value=37 Score=22.66 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=26.2
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcC--cCEEEEcCcc
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTN--VNVIFHTAAI 60 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~--vd~V~H~Aa~ 60 (93)
.+++.++++|+++++. .+.+.+.+.+ +|+|++=+|+
T Consensus 84 ~~~V~~iq~d~~~~~~---~~~l~~~l~~~~~DvV~sD~ap 121 (205)
T COG0293 84 IPGVIFLQGDITDEDT---LEKLLEALGGAPVDVVLSDMAP 121 (205)
T ss_pred CCCceEEeeeccCccH---HHHHHHHcCCCCcceEEecCCC
Confidence 4679999999999863 3445554444 5999987776
No 301
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=63.19 E-value=22 Score=25.98 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=28.2
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
.++++....|..+.. .+.+++++.|+||+++-..
T Consensus 46 ~~~v~~~~vD~~d~~------al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 46 GGKVEALQVDAADVD------ALVALIKDFDLVINAAPPF 79 (389)
T ss_pred cccceeEEecccChH------HHHHHHhcCCEEEEeCCch
Confidence 348999999999863 5778888999999998764
No 302
>PF10154 DUF2362: Uncharacterized conserved protein (DUF2362); InterPro: IPR019311 This is a family of proteins conserved from nematodes to humans. The function is not known.
Probab=60.63 E-value=5.9 Score=29.93 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=28.1
Q ss_pred cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 49 TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 49 ~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++.+|||+.+.-+...+.-.....-+.|.+|+|..|.+++
T Consensus 386 ~~~~vvfhlv~d~~~~~~~~~~r~~~~~glrnil~~~~~~~ 426 (510)
T PF10154_consen 386 SDVHVVFHLVVDDSLRSSNINSRHPIILGLRNILRTASRYD 426 (510)
T ss_pred ccceEEEEEEecCccccCCCCCcChHHHHHHHHHHHHHHcC
Confidence 46899999988765432111123445889999999998763
No 303
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=59.60 E-value=33 Score=22.42 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=37.4
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
..+++..+|+.++. .+....++++.++++..... ... . .......+..+..+.+.
T Consensus 42 ~~v~~~~~d~~~~~------~l~~a~~G~~~~~~i~~~~~-~~~-~-~~~~~~~~~~~~a~~a~ 96 (275)
T COG0702 42 GGVEVVLGDLRDPK------SLVAGAKGVDGVLLISGLLD-GSD-A-FRAVQVTAVVRAAEAAG 96 (275)
T ss_pred CCcEEEEeccCCHh------HHHHHhccccEEEEEecccc-ccc-c-hhHHHHHHHHHHHHHhc
Confidence 67889999999974 57777899999999999776 333 1 12333444444444443
No 304
>KOG1209|consensus
Probab=59.56 E-value=10 Score=25.96 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=39.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh----cCcCEEEEcCcccC-h------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ----TNVNVIFHTAAIVN-F------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~----~~vd~V~H~Aa~~~-~------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.++...+.|+++++- +. +...++. ...|+.|+.|+..- + ....+..+++|+.|..++-++..
T Consensus 52 ~gl~~~kLDV~~~~~-V~-~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~ 124 (289)
T KOG1209|consen 52 FGLKPYKLDVSKPEE-VV-TVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS 124 (289)
T ss_pred hCCeeEEeccCChHH-HH-HHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH
Confidence 468889999998752 10 1112222 24699999998752 1 23445688999999877766544
No 305
>cd02901 Macro_Poa1p_like Macro domain, Poa1p_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. Poa1p may play a role in tRNA splicing regulation.
Probab=58.32 E-value=11 Score=22.80 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=19.2
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccC
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVN 62 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~ 62 (93)
+.++.||+.+. .++|+|+|.+-...
T Consensus 2 i~~v~GDi~~~-------------~~~d~Iv~~~N~~~ 26 (140)
T cd02901 2 ITYVKGDLLHA-------------PEAAALAHAVNCDG 26 (140)
T ss_pred eEEEcCccccC-------------CCCCEEEEEEcCCC
Confidence 67899999975 15699999876553
No 306
>smart00506 A1pp Appr-1"-p processing enzyme. Function determined by Martzen et al. Extended family detected by reciprocal PSI-BLAST searches (unpublished results, and Pehrson & Fuji).
Probab=57.66 E-value=15 Score=21.72 Aligned_cols=23 Identities=22% Similarity=0.372 Sum_probs=17.9
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
++++.||+++. .+|+|+|.+-..
T Consensus 2 i~~~~Gdi~~~--------------~~d~IV~~~n~~ 24 (133)
T smart00506 2 LKVVKGDITKP--------------RADAIVNAANSD 24 (133)
T ss_pred eEEEeCCCCcc--------------cCCEEEECCCcc
Confidence 57899999974 369999977654
No 307
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=57.28 E-value=43 Score=20.52 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=31.7
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++|+|+=+|+... ...+..+.++.|..-.+.+.+...+.
T Consensus 67 ~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 67 LKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp GTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 478999999999764 34555567889999988888877654
No 308
>PF09015 NgoMIV_restric: NgoMIV restriction enzyme; InterPro: IPR015105 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents NgoMIV-type prokaryotic DNA restriction enzymes exhibiting an alpha/beta structure, with a central region comprising a mixed six-stranded beta-sheet with alpha-helices on each side. A long 'arm' protrudes out of the core of the domain between strands beta2 and beta3 and is mainly involved in the tetramerisation interface of the protein. These restriction enzymes recognise the double-stranded sequence GCCGGC and cleave after G-1 []. ; PDB: 1FIU_C 4ABT_B.
Probab=56.66 E-value=25 Score=24.45 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=29.0
Q ss_pred CCCCEEEEeccCCCCCCCCCHHHHHHHh---cCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy17241 21 FLSKVTIICGDCSKKKLGISDENLKLLQ---TNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFGELE 92 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~~~~~~l~---~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 92 (93)
..+.+..|.+.-. +..+..+. .++|.|||+|-+-- .+......-.....+++.....+|||
T Consensus 204 ~~phiv~vt~ep~-------psrlas~a~gtgdid~vyh~al~el----~~a~~~~~~~~~~~~l~~~~~g~Rlr 267 (278)
T PF09015_consen 204 RLPHIVAVTAEPL-------PSRLASLALGTGDIDCVYHFALPEL----IAAVKELGNDDAADMLRTLIDGKRLR 267 (278)
T ss_dssp S--EEEEEE-----------HHHHHHHHSSSSS-SEEEETTHHHH----HHHHHHHT-HHHHHHHHHHHHTTSEE
T ss_pred CCCeEEEEeCCCC-------hHHHHHHHcCCCccceeeeecHHHH----HHHHHHhCChhHHHHHHHHhcCcccc
Confidence 3456777775443 23455543 46899999986521 11111112222445666666777765
No 309
>KOG1494|consensus
Probab=55.73 E-value=37 Score=24.22 Aligned_cols=48 Identities=10% Similarity=0.041 Sum_probs=37.6
Q ss_pred HHHHHHHhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 41 DENLKLLQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 41 ~~~~~~l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++.++..++++|+|+=-|+... +.....+++.+|..-...|..++.++
T Consensus 87 ~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~ 135 (345)
T KOG1494|consen 87 ADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC 135 (345)
T ss_pred hhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence 3467888899999999999875 44445568899998888888887664
No 310
>cd03330 Macro_2 Macro domain, Unknown family 2. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins containing a stand-alone macro domain.
Probab=55.47 E-value=16 Score=21.97 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=17.9
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
++++.||+++. ++|+|+|.+-..
T Consensus 2 i~i~~GdI~~~--------------~~DaIVn~~N~~ 24 (133)
T cd03330 2 LEVVQGDITKV--------------DADAIVNAANSR 24 (133)
T ss_pred EEEEEcccccc--------------cCCEEEeCCCCC
Confidence 67899999963 579999976654
No 311
>cd02903 Macro_BAL_like Macro domain, BAL_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family show similarity to BAL (B-aggressive lymphoma) proteins, which contain one to three macro domains. Most BAL family macro domains belong to this family except for the most N-terminal domain in multiple-domain containing proteins. Most BAL proteins also contain a C-termin
Probab=53.55 E-value=17 Score=22.18 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=18.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
+++++.||+++. ++|+|++.|-..
T Consensus 2 ~i~i~~GdI~~~--------------~~DaIVN~an~~ 25 (137)
T cd02903 2 TLQVAKGDIEDE--------------TTDVIVNSVNPD 25 (137)
T ss_pred EEEEEeCccCCc--------------cCCEEEECCCCc
Confidence 367899999973 579999977654
No 312
>cd02908 Macro_Appr_pase_like Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase, containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate.
Probab=51.45 E-value=16 Score=22.92 Aligned_cols=24 Identities=38% Similarity=0.506 Sum_probs=18.4
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
+++++.||+++. ++|.|++.|-..
T Consensus 1 ~i~i~~GdI~~~--------------~~daIVn~an~~ 24 (165)
T cd02908 1 KIEIIQGDITKL--------------EVDAIVNAANSS 24 (165)
T ss_pred CeEEEeccccee--------------ecCEEEECCCCc
Confidence 478899999963 479999976653
No 313
>KOG1204|consensus
Probab=51.36 E-value=39 Score=23.27 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=27.9
Q ss_pred CcCEEEEcCcccCh----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 50 NVNVIFHTAAIVNF----------EASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 50 ~vd~V~H~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+-|+|||.|+.... ...++.+|..|+.+...+-..+..
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~ 129 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALP 129 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHH
Confidence 46999999998642 123345899999999888776653
No 314
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=49.24 E-value=62 Score=22.90 Aligned_cols=41 Identities=15% Similarity=-0.032 Sum_probs=32.2
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++|+|+-.|+... ...+..+.+..|+.-.+.+.....+.
T Consensus 77 ~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 77 FKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 578999999999864 34455567899999999888877665
No 315
>PHA02099 hypothetical protein
Probab=48.56 E-value=14 Score=20.51 Aligned_cols=13 Identities=23% Similarity=0.598 Sum_probs=10.9
Q ss_pred cCcCEEEEcCccc
Q psy17241 49 TNVNVIFHTAAIV 61 (93)
Q Consensus 49 ~~vd~V~H~Aa~~ 61 (93)
+++|+|||.-++-
T Consensus 42 ~g~diifha~gy~ 54 (84)
T PHA02099 42 EGVDIVFHAEGYN 54 (84)
T ss_pred CCccEEEEcCCCC
Confidence 6899999988864
No 316
>cd02906 Macro_1 Macro domain, Unknown family 1. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins containing a macro domain, either as a stand-alone domain or in addition to a C-terminal SIR2 (silent information regulator 2) domain.
Probab=47.79 E-value=23 Score=22.01 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=17.4
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
++.+++||+++. .+|.|++.|-.
T Consensus 1 ~i~v~~GdIt~~--------------~~DaIVNaaN~ 23 (147)
T cd02906 1 SIYLWKGDITTL--------------KVDAIVNAANS 23 (147)
T ss_pred CeEEEECCcCCc--------------cCCEEECCCCc
Confidence 467899999963 37999996654
No 317
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=47.28 E-value=74 Score=21.74 Aligned_cols=63 Identities=21% Similarity=0.231 Sum_probs=39.9
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc---CcCEEEEcCcccCh------hhh---HHHHHHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT---NVNVIFHTAAIVNF------EAS---LAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~---~vd~V~H~Aa~~~~------~~~---~~~~~~~Nv~gt~~ll~~a~ 86 (93)
.+.+.-..+|+.|.+- + .+.++.+.+ ..++++++|+.... ... .++.+.+|+.++.+|..+..
T Consensus 49 ~p~~~t~v~Dv~d~~~-~-~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~l 123 (245)
T COG3967 49 NPEIHTEVCDVADRDS-R-RELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLL 123 (245)
T ss_pred Ccchheeeecccchhh-H-HHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHH
Confidence 3456667789988641 1 122333333 56999999998642 122 23357899999998877654
No 318
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 []. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A ....
Probab=45.99 E-value=44 Score=22.08 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=19.2
Q ss_pred CCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEE
Q psy17241 21 FLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFH 56 (93)
Q Consensus 21 ~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H 56 (93)
...++++..||+.++. ....++.++|+||=
T Consensus 99 ~~~~v~l~~gdfl~~~------~~~~~~s~AdvVf~ 128 (205)
T PF08123_consen 99 RPGKVELIHGDFLDPD------FVKDIWSDADVVFV 128 (205)
T ss_dssp ---EEEEECS-TTTHH------HHHHHGHC-SEEEE
T ss_pred ccccceeeccCccccH------hHhhhhcCCCEEEE
Confidence 3568899999999753 35666788998874
No 319
>PRK00431 RNase III inhibitor; Provisional
Probab=45.64 E-value=26 Score=22.22 Aligned_cols=23 Identities=22% Similarity=0.481 Sum_probs=18.1
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
+++++.||+++. ++|+|++.|-.
T Consensus 4 ~i~i~~Gdi~~~--------------~~daIVn~aN~ 26 (177)
T PRK00431 4 RIEVVQGDITEL--------------EVDAIVNAANS 26 (177)
T ss_pred EEEEEeCCcccc--------------cCCEEEECCCc
Confidence 578899999973 47999997644
No 320
>COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only]
Probab=44.00 E-value=16 Score=23.80 Aligned_cols=25 Identities=20% Similarity=0.399 Sum_probs=19.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
..++.++||+++. .+|.|+|.|-..
T Consensus 3 ~~i~~v~GDIt~~--------------~~daIVnaAN~~ 27 (179)
T COG2110 3 TNIRVVQGDITKL--------------EADAIVNAANSQ 27 (179)
T ss_pred ceEEEEeccccee--------------ehhheeeccccc
Confidence 3688999999974 458888877654
No 321
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=43.72 E-value=85 Score=22.16 Aligned_cols=41 Identities=7% Similarity=-0.149 Sum_probs=31.4
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.++|+|+-+|+... ...+..+.+..|+.-.+.+.....+.
T Consensus 76 ~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 76 FKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 579999999999864 33454567889999888888777654
No 322
>cd02907 Macro_Af1521_BAL_like Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. The macro domains in this family show similarity to Af1521, a protein from Archaeoglobus fulgidus containing a stand-alone macro domain. Af1521 binds ADP-ribose and exhibits phosphatase activity toward Appr-1"-p. Also included in this family are the N-terminal (or first) macro domains
Probab=42.29 E-value=59 Score=20.53 Aligned_cols=39 Identities=13% Similarity=-0.016 Sum_probs=19.7
Q ss_pred CcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 50 NVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 50 ~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
.+..|||.+++.-...+.....+.=-.+.+++|+.|.+.
T Consensus 73 ~~k~IiH~v~P~~~~~~~~~~~~~L~~~~~~~L~~a~~~ 111 (175)
T cd02907 73 PCKYVIHAVGPRWSGGEAEECVEKLKKAILNSLRKAEEL 111 (175)
T ss_pred CCCEEEEeCCCcCCCCCCchHHHHHHHHHHHHHHHHHHc
Confidence 368999998874321111111111123456677766653
No 323
>KOG1014|consensus
Probab=41.90 E-value=47 Score=23.64 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=36.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhc--CcCEEEEcCcccCh-----hh----hHHHHHHHHHHHHHHHHHH
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQT--NVNVIFHTAAIVNF-----EA----SLAQAVLSNVCATKEFLEL 84 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~--~vd~V~H~Aa~~~~-----~~----~~~~~~~~Nv~gt~~ll~~ 84 (93)
-.+.++..|+++++. .-+.+...+. ++.+.+++++...- .+ ..+..+.+|+.++..+.+.
T Consensus 99 vev~~i~~Dft~~~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ 169 (312)
T KOG1014|consen 99 VEVRIIAIDFTKGDE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQL 169 (312)
T ss_pred cEEEEEEEecCCCch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHH
Confidence 357889999999862 1122333334 45699999998751 11 1233566788887666544
No 324
>KOG3923|consensus
Probab=41.73 E-value=39 Score=24.26 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=22.8
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHh-cCcCEEEEcCcccC
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQ-TNVNVIFHTAAIVN 62 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~-~~vd~V~H~Aa~~~ 62 (93)
.+++|++-.+++ +.++. .+.|+|++|++.-+
T Consensus 164 ~Gvef~~r~v~~---------l~E~~~~~~DVivNCtGL~a 195 (342)
T KOG3923|consen 164 NGVEFVQRRVES---------LEEVARPEYDVIVNCTGLGA 195 (342)
T ss_pred cCcEEEEeeecc---------HHHhccCCCcEEEECCcccc
Confidence 467777766664 44544 78999999999854
No 325
>cd03331 Macro_Poa1p_like_SNF2 Macro domain, Poa1p_like family, SNF2 subfamily. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this subfamily contain a C-terminal macro domain that show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. In addition, they also contain an SNF2 domain, defined by the presence of seven
Probab=41.70 E-value=34 Score=21.60 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=18.8
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 25 VTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 25 v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
++++.||+++|.- . ..+..+|+|+.=-.
T Consensus 2 I~yv~GD~~~p~~-------~--~~~~~iI~H~cN~~ 29 (152)
T cd03331 2 VRYVYGDVTHPSA-------V--CAEDAIIVHCVDDS 29 (152)
T ss_pred eEEEeCccCCCCc-------c--CCCCeEEEEEECCC
Confidence 6799999999831 0 02356899975444
No 326
>PF01661 Macro: Macro domain; InterPro: IPR002589 The Macro or A1pp domain is a module of about 180 amino acids which can bind ADP-ribose, an NAD metabolite or related ligands. Binding to ADP-ribose could be either covalent or non-covalent []: in certain cases it is believed to bind non-covalently []; while in other cases (such as Aprataxin) it appears to bind both non-covalently through a zinc finger motif, and covalently through a separate region of the protein []. The domain was described originally in association with ADP-ribose 1''-phosphate (Appr-1''-P) processing activity (A1pp) of the yeast YBR022W protein []. The domain is also called Macro domain as it is the C-terminal domain of mammalian core histone macro-H2A [, ]. Macro domain proteins can be found in eukaryotes, in (mostly pathogenic) bacteria, in archaea and in ssRNA viruses, such as coronaviruses, Rubella and Hepatitis E viruses. In vertebrates the domain occurs e.g. in histone macroH2A, in predicted poly-ADP-ribose polymerases (PARPs) and in B aggressive lymphoma (BAL) protein. The macro domain can be associated with catalytic domains, such as PARP, or sirtuin. The Macro domain can recognise ADP-ribose or in some cases poly-ADP-ribose, which can be involved in ADP-ribosylation reactions that occur in important processes, such as chromatin biology, DNA repair and transcription regulation []. The human macroH2A1.1 Macro domain binds an NAD metabolite O-acetyl-ADP-ribose []. The Macro domain has been suggested to play a regulatory role in ADP-ribosylation, which is involved in inter- and intracellular signaling, transcriptional regulation, DNA repair pathways and maintenance of genomic stability, telomere dynamics, cell differentiation and proliferation, and necrosis and apoptosis. The 3D structure of the Macro domain has a mixed alpha/beta fold of a mixed beta sheet sandwiched between four helices. Several Macro domain only domains are shorter than the structure of AF1521 and lack either the first strand or the C-terminal helix 5. Well conserved residues form a hydrophobic cleft and cluster around the AF1521-ADP-ribose binding site [, , , ]. ; PDB: 2DX6_A 2XD7_D 3Q71_A 2FAV_B 1SPV_A 3EKE_A 3EJF_A 1YD9_B 3GPG_B 3GPQ_A ....
Probab=40.89 E-value=38 Score=19.37 Aligned_cols=38 Identities=13% Similarity=0.016 Sum_probs=19.4
Q ss_pred cCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 51 VNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 51 vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.+|+|+.++.-.........+.=-.+..++|+.|.+.
T Consensus 55 ~~~Iih~v~P~~~~~~~~~~~~~L~~~~~~~l~~a~~~ 92 (118)
T PF01661_consen 55 CKYIIHAVGPTYNSPGEKNSYEALESAYRNALQKAEEN 92 (118)
T ss_dssp SSEEEEEEEEETTTSTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred ccceEEEecceeccccccccHHHHHHHHHHHHHHHHHc
Confidence 58999998865210011111122233456777777553
No 327
>KOG1207|consensus
Probab=40.32 E-value=11 Score=25.14 Aligned_cols=59 Identities=24% Similarity=0.208 Sum_probs=38.8
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhc---CcCEEEEcCcccCh-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQT---NVNVIFHTAAIVNF-------EASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~---~vd~V~H~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
+..++++.+|+++. +.+.+++. .+|..++.|+.... .+++...+++|+.+..++.+...
T Consensus 52 p~~I~Pi~~Dls~w------ea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~va 120 (245)
T KOG1207|consen 52 PSLIIPIVGDLSAW------EALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVA 120 (245)
T ss_pred CcceeeeEecccHH------HHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHH
Confidence 34588999999974 23444433 45888898887532 12223357889999888877643
No 328
>COG1744 Med Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [General function prediction only]
Probab=40.05 E-value=33 Score=24.49 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=24.4
Q ss_pred EEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChh
Q psy17241 27 IICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFE 64 (93)
Q Consensus 27 ~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~ 64 (93)
.+.|+..|+..+-+ .....+-+++|+|+|.|+.+...
T Consensus 198 ~~~gsf~D~~k~k~-~a~~li~~GaDVI~~~ag~~~~g 234 (345)
T COG1744 198 VYVGSFSDPAKGKE-AANALIDQGADVIYPAAGGTGVG 234 (345)
T ss_pred EEecCccChHHHHH-HHHHHHhcCCCEEEecCCCCcch
Confidence 46678998865321 11223347999999999887653
No 329
>cd02749 Macro Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes.
Probab=39.91 E-value=79 Score=18.94 Aligned_cols=39 Identities=13% Similarity=-0.038 Sum_probs=23.6
Q ss_pred CcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 50 NVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 50 ~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++.+|+|+.++...........+.-..+..++|+.|.+.
T Consensus 72 ~~~~vih~~~p~~~~~~~~~~~~~l~~a~~~~L~~~~~~ 110 (147)
T cd02749 72 GAKYLIHIVGPKYNQGNNKAAFELLKNAYENCLKEAEEK 110 (147)
T ss_pred cCCEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHHHHHc
Confidence 378999999976443321122344455667777777653
No 330
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=39.01 E-value=1.1e+02 Score=21.09 Aligned_cols=41 Identities=10% Similarity=0.027 Sum_probs=30.7
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.++|+||.+++... ...+..+.+..|+.-.+.+.+...+.
T Consensus 66 l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 66 CKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999754 33344567788998888888777654
No 331
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=38.33 E-value=47 Score=24.44 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=23.7
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHH---hcCcCEEEEcCccc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLL---QTNVNVIFHTAAIV 61 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l---~~~vd~V~H~Aa~~ 61 (93)
.+..+.+|+++++- + ...++.+ ..++|+++|++|..
T Consensus 104 ~a~~i~~DVss~E~-v-~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 104 YAKSINGDAFSDEI-K-QKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred ceEEEEcCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCccC
Confidence 46678999998641 1 1122222 34689999999976
No 332
>cd02904 Macro_H2A_like Macro domain, Macro_H2A_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family are similar to macroH2A, a variant of the major-type core histone H2A, which contains an N-terminal H2A domain and a C-terminal nonhistone macro domain. Histone macroH2A is enriched on the inactive X chromosome of mammalian female cells. It does not bind poly ADP-r
Probab=38.11 E-value=31 Score=22.52 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=18.9
Q ss_pred CCCEEEEeccC--CCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 22 LSKVTIICGDC--SKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 22 ~~~v~~v~gDl--~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
..++.+++||+ ++ .++|.|++.|-.
T Consensus 17 ~~~i~i~~gDI~~t~--------------~~vDaIVNaaN~ 43 (186)
T cd02904 17 GQKLSLVQSDISIGS--------------IDVEGIVHPTNA 43 (186)
T ss_pred CCEEEEEECCccccc--------------eeccEEEcCCcc
Confidence 45799999999 54 257999986654
No 333
>PRK04143 hypothetical protein; Provisional
Probab=36.65 E-value=35 Score=23.60 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=19.0
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
.++.++.||+++. .+|.|++.|-.
T Consensus 83 ~~i~i~~GDIt~l--------------~vDAIVNAANs 106 (264)
T PRK04143 83 DNIFLWQGDITRL--------------KVDAIVNAANS 106 (264)
T ss_pred CEEEEEECCccee--------------ecCEEEeCccc
Confidence 5788999999963 47999987654
No 334
>KOG0532|consensus
Probab=36.48 E-value=56 Score=25.67 Aligned_cols=31 Identities=29% Similarity=0.358 Sum_probs=17.4
Q ss_pred EEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 55 FHTAAIVNFEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 55 ~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
||.+++....-++... +-||. |.||+|++.|
T Consensus 622 IHVPSPaV~klsmarc-rrNVd---nFLeaCRkiG 652 (722)
T KOG0532|consen 622 IHVPSPAVPKLSMARC-RRNVD---NFLEACRKIG 652 (722)
T ss_pred eecCCCccchhHHHHH-HHhHH---HHHHHHHHcC
Confidence 3444443333333333 44665 7899999876
No 335
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=36.46 E-value=77 Score=17.68 Aligned_cols=29 Identities=14% Similarity=0.400 Sum_probs=20.1
Q ss_pred CCCCCEEEEeccC-CCCCCCCCHHHHHHHhcCcCEEEEcC
Q psy17241 20 GFLSKVTIICGDC-SKKKLGISDENLKLLQTNVNVIFHTA 58 (93)
Q Consensus 20 ~~~~~v~~v~gDl-~~~~~gl~~~~~~~l~~~vd~V~H~A 58 (93)
...++++++.+|+ ..... ..+.|+|+=..
T Consensus 49 ~~~~~i~~~~~d~~~~~~~----------~~~~D~v~~~~ 78 (112)
T PF12847_consen 49 GLSDRITFVQGDAEFDPDF----------LEPFDLVICSG 78 (112)
T ss_dssp TTTTTEEEEESCCHGGTTT----------SSCEEEEEECS
T ss_pred CCCCCeEEEECccccCccc----------CCCCCEEEECC
Confidence 4568999999999 33221 24689887766
No 336
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=36.29 E-value=22 Score=22.92 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=10.3
Q ss_pred HHHHHHhcCcCEEEEcCcc
Q psy17241 42 ENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 42 ~~~~~l~~~vd~V~H~Aa~ 60 (93)
+.+.+|+.++|+||+.-.+
T Consensus 12 ~~l~~L~~~ADV~i~n~rp 30 (191)
T PF02515_consen 12 AALRRLLATADVVIENFRP 30 (191)
T ss_dssp HHHHHHHHT-SEEEEESST
T ss_pred HHHHHHHHhCCEEEECCch
Confidence 3455666666666665443
No 337
>KOG2633|consensus
Probab=35.05 E-value=83 Score=20.98 Aligned_cols=39 Identities=21% Similarity=0.129 Sum_probs=23.0
Q ss_pred CEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy17241 52 NVIFHTAAIVNFEASLAQAVLSNVCATKEFLELATSFGELE 92 (93)
Q Consensus 52 d~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 92 (93)
-.|||+.++.......+... .=..+.++.|++|.. +.|+
T Consensus 96 k~vIHtvgP~~~~d~~~~~~-~L~~~~rs~L~la~~-~~ls 134 (200)
T KOG2633|consen 96 KRVIHTVGPRWKEDKLQECY-FLHSCYRSCLDLAIE-KLLS 134 (200)
T ss_pred eEEEEecCchhhccchHHHH-HHHHHHHHHHHHHHH-hccc
Confidence 57999999976544443332 112334677777776 4443
No 338
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=34.96 E-value=1e+02 Score=21.41 Aligned_cols=47 Identities=21% Similarity=0.323 Sum_probs=34.1
Q ss_pred HHHHHHHhhCCCCCCCEEEEeccCCCCCCCCCHHHHHHHhc-CcCEEE
Q psy17241 9 MIFDKLKQEQPGFLSKVTIICGDCSKKKLGISDENLKLLQT-NVNVIF 55 (93)
Q Consensus 9 ~~~d~~~~~~~~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~-~vd~V~ 55 (93)
.+.+.+..........+.++.+.-+-..+||+++.+..+.+ ++|+|-
T Consensus 17 ~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~dviT 64 (266)
T COG1692 17 AVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGADVIT 64 (266)
T ss_pred HHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCCCEEe
Confidence 34444444444555678889999999999999988887764 788773
No 339
>PRK14982 acyl-ACP reductase; Provisional
Probab=34.75 E-value=39 Score=24.20 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=15.5
Q ss_pred HHHHhcCcCEEEEcCcccCh
Q psy17241 44 LKLLQTNVNVIFHTAAIVNF 63 (93)
Q Consensus 44 ~~~l~~~vd~V~H~Aa~~~~ 63 (93)
+.+.+.++|+|||+|+....
T Consensus 209 l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 209 LEEALPEADIVVWVASMPKG 228 (340)
T ss_pred HHHHHccCCEEEECCcCCcC
Confidence 44566789999999998553
No 340
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=34.56 E-value=1.5e+02 Score=20.92 Aligned_cols=43 Identities=7% Similarity=0.003 Sum_probs=32.3
Q ss_pred HHhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 46 LLQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 46 ~l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.++++|+|+=+|+... ...+..+.+..|..-.+.+.+...+.
T Consensus 64 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 64 KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33689999999999854 44455567889999888888776654
No 341
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=33.27 E-value=1.6e+02 Score=20.70 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=31.1
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++|+|+-.|+... ...+..+.+..|..-.+.+++...+.
T Consensus 71 ~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 71 CKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 479999999999754 34455567888999888887777653
No 342
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=32.22 E-value=1.7e+02 Score=20.32 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=30.8
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++|+|+=.|+... ...+..+.+..|+.-.+.+.+...+.
T Consensus 62 ~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 62 CKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred HCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999754 33344567888999888888777654
No 343
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=31.13 E-value=2.2e+02 Score=23.90 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=23.3
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCccc
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIV 61 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~ 61 (93)
+++.+..|+.|. +.+..+++++|+|+.|.-..
T Consensus 628 ~~~~v~lDv~D~------e~L~~~v~~~DaVIsalP~~ 659 (1042)
T PLN02819 628 NAEAVQLDVSDS------ESLLKYVSQVDVVISLLPAS 659 (1042)
T ss_pred CCceEEeecCCH------HHHHHhhcCCCEEEECCCch
Confidence 456677787764 35666667899999987663
No 344
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=31.06 E-value=55 Score=23.90 Aligned_cols=16 Identities=13% Similarity=0.443 Sum_probs=13.1
Q ss_pred hcCcCEEEEcCcccCh
Q psy17241 48 QTNVNVIFHTAAIVNF 63 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~~ 63 (93)
...+|++||+||..++
T Consensus 265 ~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 265 LPQADIFIMAAAVADY 280 (399)
T ss_pred cCCCCEEEEccccccc
Confidence 3568999999998765
No 345
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=30.44 E-value=2e+02 Score=20.31 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=32.4
Q ss_pred HhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy17241 47 LQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSFG 89 (93)
Q Consensus 47 l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 89 (93)
.++++|+|+=.|+... ...+..+.+..|+.-.+.+.....+..
T Consensus 57 ~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~~i~~~a 100 (313)
T TIGR01756 57 AFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYA 100 (313)
T ss_pred HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3589999999999854 344555678999998888887766543
No 346
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=29.22 E-value=1e+02 Score=17.07 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=19.7
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAA 59 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa 59 (93)
.+++++.+|+.+ +.......|+|+-...
T Consensus 49 ~~~~~~~~D~~~---------l~~~~~~~D~v~~~~~ 76 (101)
T PF13649_consen 49 PKVRFVQADARD---------LPFSDGKFDLVVCSGL 76 (101)
T ss_dssp TTSEEEESCTTC---------HHHHSSSEEEEEE-TT
T ss_pred CceEEEECCHhH---------CcccCCCeeEEEEcCC
Confidence 388999999975 3333457899998655
No 347
>PTZ00146 fibrillarin; Provisional
Probab=28.35 E-value=72 Score=22.47 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=22.9
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
+++.++.+|..++. .+..+...+|+||+-++.
T Consensus 181 ~NI~~I~~Da~~p~------~y~~~~~~vDvV~~Dva~ 212 (293)
T PTZ00146 181 PNIVPIIEDARYPQ------KYRMLVPMVDVIFADVAQ 212 (293)
T ss_pred CCCEEEECCccChh------hhhcccCCCCEEEEeCCC
Confidence 57889999988652 244444678999998864
No 348
>KOG1178|consensus
Probab=28.15 E-value=4.5 Score=33.06 Aligned_cols=63 Identities=25% Similarity=0.298 Sum_probs=49.4
Q ss_pred CEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHHHHHHHHHHHHHHHHHHH
Q psy17241 24 KVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQAVLSNVCATKEFLELAT 86 (93)
Q Consensus 24 ~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~ 86 (93)
++..+.+++....++++...+..+...++.++|..+..+...++......|+.++.+.++.+.
T Consensus 783 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~~~~~~~l~~ 845 (1032)
T KOG1178|consen 783 NIIVHLIDLSKSLFGLEDTLWNKLQEPVSIVIHNGALVHEVLRYTELRYPNVIGTITVLPLYS 845 (1032)
T ss_pred eeeeehhhhhhhhhcccchhhhccccCcceecccccceeeechhhccCCceeeeeeeeeeeec
Confidence 566677888888888988888888889999999999998776666655667777766655543
No 349
>PRK05442 malate dehydrogenase; Provisional
Probab=27.94 E-value=2.1e+02 Score=20.29 Aligned_cols=40 Identities=8% Similarity=-0.110 Sum_probs=31.5
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.++|+|+-+|+... ...+..+.+..|+.-.+.+.+...+
T Consensus 78 ~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~ 118 (326)
T PRK05442 78 FKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNE 118 (326)
T ss_pred hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999754 3445566789999999988877766
No 350
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=27.76 E-value=2.1e+02 Score=19.79 Aligned_cols=41 Identities=7% Similarity=0.089 Sum_probs=30.2
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.++|+||-+|+... ...+..+.+..|+.-.+.+.+...+.
T Consensus 64 l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 64 AADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999754 33444556778888888887776654
No 351
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=27.35 E-value=2.1e+02 Score=20.12 Aligned_cols=43 Identities=9% Similarity=0.027 Sum_probs=31.1
Q ss_pred HHhcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 46 LLQTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 46 ~l~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
+.++++|+|+=+|+... ...+..+.+..|+.-.+.+.+...+.
T Consensus 63 ~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 63 NALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred HHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 34689999999999754 33344457788988888877766543
No 352
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=26.87 E-value=1.7e+02 Score=20.20 Aligned_cols=44 Identities=20% Similarity=0.262 Sum_probs=27.1
Q ss_pred HHHHhhCCCCCCCEEEEeccCCCCCCCCCHHHHHHHhc-CcCEEE
Q psy17241 12 DKLKQEQPGFLSKVTIICGDCSKKKLGISDENLKLLQT-NVNVIF 55 (93)
Q Consensus 12 d~~~~~~~~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~-~vd~V~ 55 (93)
+.+.+........+.+..|+-....+||+...++++.+ ++|+|-
T Consensus 17 ~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~~GvDviT 61 (253)
T PF13277_consen 17 EHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFKAGVDVIT 61 (253)
T ss_dssp HHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHHHT-SEEE
T ss_pred HHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHhcCCCEEe
Confidence 33443334455678888999998899999988888764 789874
No 353
>PF06162 DUF976: Caenorhabditis elegans protein of unknown function (DUF976); InterPro: IPR010381 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=25.56 E-value=48 Score=21.41 Aligned_cols=12 Identities=17% Similarity=0.288 Sum_probs=10.5
Q ss_pred CcCEEEEcCccc
Q psy17241 50 NVNVIFHTAAIV 61 (93)
Q Consensus 50 ~vd~V~H~Aa~~ 61 (93)
..|.|||+|+.+
T Consensus 81 ~~~~viHL~~Hs 92 (166)
T PF06162_consen 81 QPDFVIHLASHS 92 (166)
T ss_pred CCCeEEEecCCC
Confidence 569999999986
No 354
>PRK04266 fibrillarin; Provisional
Probab=25.18 E-value=1e+02 Score=20.60 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=20.3
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAA 59 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa 59 (93)
.++.++.+|..++. ....+...+|+|+|-.+
T Consensus 120 ~nv~~i~~D~~~~~------~~~~l~~~~D~i~~d~~ 150 (226)
T PRK04266 120 KNIIPILADARKPE------RYAHVVEKVDVIYQDVA 150 (226)
T ss_pred CCcEEEECCCCCcc------hhhhccccCCEEEECCC
Confidence 56889999988652 11222346899998644
No 355
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=24.55 E-value=2.5e+02 Score=19.68 Aligned_cols=41 Identities=22% Similarity=0.147 Sum_probs=30.0
Q ss_pred hcCcCEEEEcCcccCh-hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy17241 48 QTNVNVIFHTAAIVNF-EASLAQAVLSNVCATKEFLELATSF 88 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 88 (93)
++++|+|+-+|+...- ..+..+.+..|+.-.+.+.+...+.
T Consensus 69 ~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 69 TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5799999999987543 3344557788888888777776654
No 356
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=24.36 E-value=78 Score=23.08 Aligned_cols=40 Identities=8% Similarity=0.300 Sum_probs=23.5
Q ss_pred hcCcCEEEEcCcccChhhh--HH-------HHHHHHHHHHHHHHHHHHh
Q psy17241 48 QTNVNVIFHTAAIVNFEAS--LA-------QAVLSNVCATKEFLELATS 87 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~~~~~--~~-------~~~~~Nv~gt~~ll~~a~~ 87 (93)
..++|++||+||...+... .. ..+..|+..+-.+|...++
T Consensus 263 ~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~ 311 (390)
T TIGR00521 263 AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK 311 (390)
T ss_pred cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence 3568999999999875321 10 1123455556666665543
No 357
>PLN00135 malate dehydrogenase
Probab=23.42 E-value=2.7e+02 Score=19.59 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=31.7
Q ss_pred hcCcCEEEEcCcccC-hhhhHHHHHHHHHHHHHHHHHHHHh
Q psy17241 48 QTNVNVIFHTAAIVN-FEASLAQAVLSNVCATKEFLELATS 87 (93)
Q Consensus 48 ~~~vd~V~H~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~ 87 (93)
+.++|+|+=+|+... ...+..+.+..|+.-.+.+.....+
T Consensus 56 ~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~~~i~~ 96 (309)
T PLN00135 56 CKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEK 96 (309)
T ss_pred hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999854 3445556788999999988887776
No 358
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=22.49 E-value=98 Score=20.73 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=24.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
+.+.+++.|+.|+. .+...+.+.|+||-.-+.
T Consensus 41 ~~~~i~q~Difd~~------~~a~~l~g~DaVIsA~~~ 72 (211)
T COG2910 41 QGVTILQKDIFDLT------SLASDLAGHDAVISAFGA 72 (211)
T ss_pred ccceeecccccChh------hhHhhhcCCceEEEeccC
Confidence 67889999999874 355667899999976444
No 359
>KOG2648|consensus
Probab=22.34 E-value=3e+02 Score=20.82 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=29.1
Q ss_pred HHHHHHHhhCCCCCCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCc
Q psy17241 9 MIFDKLKQEQPGFLSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAA 59 (93)
Q Consensus 9 ~~~d~~~~~~~~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa 59 (93)
.+.+++.+..+. =.||-||.+-....++ ++.+.--++|.|+|.+-
T Consensus 67 ~I~~ile~~~~~----k~~VLaDttYGsCCVD--evaA~h~~ad~lVHyG~ 111 (453)
T KOG2648|consen 67 KISDILESFTGA----KTFVLGDTTYGSCCVD--EVAAEHLDADALVHYGH 111 (453)
T ss_pred HHHHHHHHhccc----cEEEEecCcccccccc--hHHHhhcCCCEEEEecc
Confidence 344455544432 4578899987766554 45544468999999854
No 360
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=21.57 E-value=2.7e+02 Score=19.26 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=27.8
Q ss_pred CCCCCEEEEeccCCCCCCCCCHHHHHHHhc-CcCEEEE
Q psy17241 20 GFLSKVTIICGDCSKKKLGISDENLKLLQT-NVNVIFH 56 (93)
Q Consensus 20 ~~~~~v~~v~gDl~~~~~gl~~~~~~~l~~-~vd~V~H 56 (93)
.....+.+..||.....+|++++..+.+.+ ++|++--
T Consensus 28 ~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvDviT~ 65 (266)
T TIGR00282 28 KYQADLVIANGENTTHGKGLTLKIYEFLKQSGVNYITM 65 (266)
T ss_pred hCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCCEEEc
Confidence 334568888899987778999888877753 7887754
No 361
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=21.52 E-value=1.4e+02 Score=19.81 Aligned_cols=40 Identities=18% Similarity=0.369 Sum_probs=26.8
Q ss_pred CCCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcccChhhhHHH
Q psy17241 22 LSKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAIVNFEASLAQ 69 (93)
Q Consensus 22 ~~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~~~~~~~~~~ 69 (93)
..+++++.||+-+... + ....+|.||-.++...+....+.
T Consensus 96 ~~~i~~~~gDfF~l~~----~----~~g~fD~iyDr~~l~Alpp~~R~ 135 (218)
T PF05724_consen 96 AGRITIYCGDFFELPP----E----DVGKFDLIYDRTFLCALPPEMRE 135 (218)
T ss_dssp TSSEEEEES-TTTGGG----S----CHHSEEEEEECSSTTTS-GGGHH
T ss_pred CCceEEEEcccccCCh----h----hcCCceEEEEecccccCCHHHHH
Confidence 3578999999987421 1 12468999999999887555443
No 362
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.41 E-value=87 Score=19.28 Aligned_cols=27 Identities=11% Similarity=0.362 Sum_probs=20.2
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHT 57 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~ 57 (93)
..+.++.-|+++|++++ -+++|.||-+
T Consensus 51 ~g~~~v~DDitnP~~~i--------Y~~A~lIYSi 77 (129)
T COG1255 51 EGLRFVVDDITNPNISI--------YEGADLIYSI 77 (129)
T ss_pred ccceEEEccCCCccHHH--------hhCccceeec
Confidence 67889999999997532 3567877754
No 363
>TIGR03253 oxalate_frc formyl-CoA transferase. This enzyme, formyl-CoA transferase, transfers coenzyme A from formyl-CoA to oxalate. It forms a pathway, together with oxalyl-CoA decarboxylase, for oxalate degradation; decarboxylation by the latter gene regenerates formyl-CoA. The two enzymes typically are encoded by a two-gene operon.
Probab=20.33 E-value=1.8e+02 Score=21.19 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=24.5
Q ss_pred CCEEEEeccCCCCCCCCCHHHHHHHhcCcCEEEEcCcc
Q psy17241 23 SKVTIICGDCSKKKLGISDENLKLLQTNVNVIFHTAAI 60 (93)
Q Consensus 23 ~~v~~v~gDl~~~~~gl~~~~~~~l~~~vd~V~H~Aa~ 60 (93)
.+=+.+..|+.++. | .+.+.+|++++|+||+.--+
T Consensus 64 r~Krsi~lDLk~~~-g--~~~l~~Lv~~ADVvien~rp 98 (415)
T TIGR03253 64 CNKRSITLNTKTPE-G--KEVLEELIKKADVMVENFGP 98 (415)
T ss_pred CCCeEEEeeCCCHH-H--HHHHHHHHhhCCEEEECCCC
Confidence 34456677888764 1 24578888999999986644
Done!