BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17242
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53361|TBP_SPOFR TATA-box-binding protein OS=Spodoptera frugiperda GN=Tbp PE=2 SV=1
Length = 307
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/173 (91%), Positives = 161/173 (93%), Gaps = 3/173 (1%)
Query: 1 MSPSTPGP--PMTPVDMG-GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAV 57
+S ++P P PMTP G VPQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV
Sbjct: 110 LSQASPAPMTPMTPHSADPGIVPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAV 169
Query: 58 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVG 117
IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGF AKFLDFKIQNMVG
Sbjct: 170 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 229
Query: 118 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 230 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 282
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 223 KIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 282
Query: 80 GAKSEED 86
GAK E+
Sbjct: 283 GAKVREE 289
>sp|O45211|TBP_BOMMO TATA-box-binding protein OS=Bombyx mori GN=Tbp PE=2 SV=1
Length = 307
Score = 311 bits (798), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 156/173 (90%), Positives = 162/173 (93%), Gaps = 3/173 (1%)
Query: 1 MSPSTPGP--PMTPVDMG-GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAV 57
+S ++P P P+TP+ G +PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV
Sbjct: 110 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 169
Query: 58 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVG 117
IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGF AKFLDFKIQNMVG
Sbjct: 170 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 229
Query: 118 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 230 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 282
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 223 KIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 282
Query: 80 GAKSEED 86
GAK E+
Sbjct: 283 GAKVREE 289
>sp|A6H907|TBPL2_PANTR TATA box-binding protein-like protein 2 OS=Pan troglodytes GN=TBPL2
PE=2 SV=1
Length = 376
Score = 311 bits (798), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/167 (91%), Positives = 158/167 (94%), Gaps = 1/167 (0%)
Query: 5 TPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRE 63
TP PMTP+ + G VPQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAVIMRIRE
Sbjct: 184 TPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIRE 243
Query: 64 PRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKF 123
PRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSCDVKF
Sbjct: 244 PRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKF 303
Query: 124 PIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
PIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 304 PIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 350
Query: 80 GAK 82
GAK
Sbjct: 351 GAK 353
>sp|Q92146|TBP_TRIGA TATA-box-binding protein OS=Trimeresurus gramineus GN=TBP PE=3 SV=1
Length = 302
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 106 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 165
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 166 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 225
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 226 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 217 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Query: 80 GAK 82
GAK
Sbjct: 277 GAK 279
>sp|Q92117|TBP_PROFL TATA-box-binding protein OS=Protobothrops flavoviridis GN=TBP PE=3
SV=1
Length = 300
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 104 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 163
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 164 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 223
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 224 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 274
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 215 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 274
Query: 80 GAK 82
GAK
Sbjct: 275 GAK 277
>sp|P53360|TBP_MESAU TATA-box-binding protein OS=Mesocricetus auratus GN=TBP PE=2 SV=1
Length = 318
Score = 310 bits (795), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 122 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 181
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 182 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 241
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 242 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 292
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 233 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 292
Query: 80 GAK 82
GAK
Sbjct: 293 GAK 295
>sp|P29037|TBP_MOUSE TATA-box-binding protein OS=Mus musculus GN=Tbp PE=1 SV=1
Length = 316
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 120 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 179
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 180 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 239
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 240 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 290
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 231 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 290
Query: 80 GAK 82
GAK
Sbjct: 291 GAK 293
>sp|P20227|TBP_DROME TATA-box-binding protein OS=Drosophila melanogaster GN=Tbp PE=1
SV=1
Length = 353
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPVDMG-GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M PSTP P TP G VPQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 157 MGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC
Sbjct: 217 RIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 276
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH FSSYEPELFPGLIYRMV+PRIVLLIFVSGKVVLT
Sbjct: 277 DVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 80 GAKSEEDSRLAARKYARIIQKL 101
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKKF 349
>sp|Q6SJ96|TBPL2_HUMAN TATA box-binding protein-like protein 2 OS=Homo sapiens GN=TBPL2
PE=2 SV=1
Length = 375
Score = 310 bits (793), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/167 (90%), Positives = 158/167 (94%), Gaps = 1/167 (0%)
Query: 5 TPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRE 63
TP PMTP+ + G VPQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAVIMRIRE
Sbjct: 184 TPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIRE 243
Query: 64 PRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKF 123
PRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPA+FLDFKIQNMVGSCDV+F
Sbjct: 244 PRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRF 303
Query: 124 PIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
PIRLEGLVLTH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 304 PIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Query: 80 GAKSEED 86
GAK +
Sbjct: 351 GAKERSE 357
>sp|O13270|TBP_CHICK TATA-box-binding protein OS=Gallus gallus GN=TBP PE=2 SV=1
Length = 302
Score = 309 bits (792), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 106 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 165
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 166 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 225
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 226 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 217 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Query: 80 GAK 82
GAK
Sbjct: 277 GAK 279
>sp|P20226|TBP_HUMAN TATA-box-binding protein OS=Homo sapiens GN=TBP PE=1 SV=2
Length = 339
Score = 309 bits (792), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 143 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 202
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 203 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 262
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 263 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 80 GAK 82
GAK
Sbjct: 314 GAK 316
>sp|Q2HJ52|TBP_BOVIN TATA-box-binding protein OS=Bos taurus GN=TBP PE=2 SV=1
Length = 319
Score = 309 bits (791), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 123 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 182
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 183 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 242
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 243 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 293
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 234 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 293
Query: 80 GAK 82
GAK
Sbjct: 294 GAK 296
>sp|Q28GG8|TBP_XENTR TATA-box-binding protein OS=Xenopus tropicalis GN=tbp PE=2 SV=1
Length = 297
Score = 308 bits (790), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M+P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 101 MTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 160
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 161 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 220
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 221 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 271
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 212 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 271
Query: 80 GAK 82
GAK
Sbjct: 272 GAK 274
>sp|Q4R4F5|TBP_MACFA TATA-box-binding protein OS=Macaca fascicularis GN=TBP PE=2 SV=1
Length = 326
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/173 (88%), Positives = 158/173 (91%), Gaps = 4/173 (2%)
Query: 2 SPSTPGPPMTPV----DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAV 57
SP TP P+TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAV
Sbjct: 128 SPVTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAV 187
Query: 58 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVG 117
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVG
Sbjct: 188 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVG 247
Query: 118 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
SCDVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 248 SCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 300
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 241 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 300
Query: 80 GAK 82
GAK
Sbjct: 301 GAK 303
>sp|Q7SXL3|TBP_DANRE TATA-box-binding protein OS=Danio rerio GN=tbp PE=1 SV=1
Length = 302
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
++P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 106 LTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 165
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 166 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 225
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 226 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 217 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 276
Query: 80 GAK 82
GAK
Sbjct: 277 GAK 279
>sp|P27633|TBP_XENLA TATA-box-binding protein OS=Xenopus laevis GN=tbp PE=1 SV=1
Length = 297
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
++P TP P TP + G VPQLQNIVSTVNLGCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 101 ITPMTPISPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 160
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSC
Sbjct: 161 RIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSC 220
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLT
Sbjct: 221 DVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 271
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 212 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 271
Query: 80 GAK 82
GAK
Sbjct: 272 GAK 274
>sp|Q5UE94|TBPL2_XENLA TATA box-binding protein-like protein 2 OS=Xenopus laevis GN=tbpl2
PE=2 SV=1
Length = 320
Score = 306 bits (783), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 151/158 (95%)
Query: 13 VDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 72
+ G VPQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS
Sbjct: 137 AESSGIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 196
Query: 73 SGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL 132
SGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSCDV+FPIRLEGLVL
Sbjct: 197 SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVL 256
Query: 133 THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
TH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 257 THQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 294
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 235 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 294
Query: 80 GAK 82
GAK
Sbjct: 295 GAK 297
>sp|P91809|TBP_STRPU TATA-box-binding protein OS=Strongylocentrotus purpuratus PE=2 SV=1
Length = 265
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/170 (88%), Positives = 158/170 (92%), Gaps = 1/170 (0%)
Query: 1 MSPSTPGPPMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMR 60
M+P TP P + + G VPQLQNIVSTVNL C+LDLKKIALHARNAEYNPKRFAAVIMR
Sbjct: 71 MAPLTPATPAS-SESSGIVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMR 129
Query: 61 IREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCD 120
IREPRTTALIFSSGKMVCTGAK E++SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCD
Sbjct: 130 IREPRTTALIFSSGKMVCTGAKREDNSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCD 189
Query: 121 VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 190 VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 239
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 180 KIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 239
Query: 80 GAKSEED 86
GAK ++
Sbjct: 240 GAKVRQE 246
>sp|Q28DH2|TBPL2_XENTR TATA box-binding protein-like protein 2 OS=Xenopus tropicalis
GN=tbpl2 PE=2 SV=1
Length = 322
Score = 305 bits (782), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 151/158 (95%)
Query: 13 VDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 72
+ G VPQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS
Sbjct: 139 AESSGIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 198
Query: 73 SGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL 132
SGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSCDV+FPIRLEGLVL
Sbjct: 199 SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVL 258
Query: 133 THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
TH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 259 THQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 296
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 237 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 296
Query: 80 GAKSEED 86
GAK +
Sbjct: 297 GAKERSE 303
>sp|O17488|TBP_ARTSF TATA-box-binding protein OS=Artemia franciscana PE=2 SV=1
Length = 275
Score = 305 bits (782), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/172 (88%), Positives = 158/172 (91%), Gaps = 4/172 (2%)
Query: 3 PSTPGP--PMTPVDMG--GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVI 58
P TP P P TP + G +P L+NIVSTVNLGC+LDLKKIAL ARNAEYNPKRFAAVI
Sbjct: 80 PGTPAPATPHTPASVADPGIIPVLENIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVI 139
Query: 59 MRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGS 118
MRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARI+QKLGF AKFLDFKIQNMVGS
Sbjct: 140 MRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIVQKLGFSAKFLDFKIQNMVGS 199
Query: 119 CDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
CDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 200 CDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 251
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 192 KIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 251
Query: 80 GAKSEED 86
GAK ++
Sbjct: 252 GAKVRQE 258
>sp|Q1JPY4|TBPL2_DANRE TATA box-binding protein-like protein 2 OS=Danio rerio GN=tbpl2
PE=1 SV=1
Length = 312
Score = 298 bits (762), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/158 (90%), Positives = 147/158 (93%)
Query: 13 VDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 72
+ G +PQLQNIVSTVNL C LDLK IAL ARNAEYNPKRFAAVIMRIREPRTTALIFS
Sbjct: 130 AESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFS 189
Query: 73 SGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL 132
SGKMVCTGAKSEE SRLAARKYAR++QKLGFPAKFLDFKIQNMVGSCDV FPIRLEGLVL
Sbjct: 190 SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVL 249
Query: 133 THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
TH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 250 THQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 287
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 228 KIQNMVGSCDVCFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 287
Query: 80 GAK 82
GAK
Sbjct: 288 GAK 290
>sp|Q6SJ94|TBPL2_TAKRU TATA box-binding protein-like protein 2 OS=Takifugu rubripes
GN=tbpl2 PE=2 SV=1
Length = 322
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/158 (89%), Positives = 147/158 (93%)
Query: 13 VDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 72
+ G +PQLQNIVSTVNLGC LDLK IAL ARNAEYNPKRFAAVIMRIREPRTTALIFS
Sbjct: 140 TERSGIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFS 199
Query: 73 SGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL 132
SGKMVCTGAKSEE SRLAARKYAR++QKLGFPA+F+DFKIQNMV SCDV FPIRLEGLVL
Sbjct: 200 SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFMDFKIQNMVASCDVCFPIRLEGLVL 259
Query: 133 THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
TH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
Sbjct: 260 THQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 297
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V++ ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 238 KIQNMVASCDVCFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 297
Query: 80 GAK 82
GAK
Sbjct: 298 GAK 300
>sp|Q9NHP5|TBP_DROVI TATA-box-binding protein OS=Drosophila virilis GN=Tbp PE=3 SV=1
Length = 349
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/171 (85%), Positives = 149/171 (87%), Gaps = 1/171 (0%)
Query: 1 MSPSTPGPPMTPVDMG-GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIM 59
M PSTP P TP G VPQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFA VIM
Sbjct: 153 MGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAPVIM 212
Query: 60 RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC 119
RIREPRTTALIFSSGKMVCTGAK E+DSRLAARKYARIIQKLGF AKFLD KIQNMVG C
Sbjct: 213 RIREPRTTALIFSSGKMVCTGAKGEDDSRLAARKYARIIQKLGFRAKFLDLKIQNMVGLC 272
Query: 120 DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
DVKFPIRLEGLVLTH FS YEPELFPGLIYRMV+PRIVLL+ GKVVLT
Sbjct: 273 DVKFPIRLEGLVLTHCNFSRYEPELFPGLIYRMVRPRIVLLLPAPGKVVLT 323
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V ++ + L+ + L H + Y P+ F +I R+ PR L+ + GK+V T
Sbjct: 264 KIQNMVGLCDVKFPIRLEGLVLTHCNFSRYEPELFPGLIYRMVRPRIVLLLPAPGKVVLT 323
Query: 80 GAKSEEDSRLAARKYARIIQKL 101
GAK ++ A K I++K
Sbjct: 324 GAKVRQEIYDAFDKIFSILKKF 345
>sp|P26354|TBP_ACACA TATA-box-binding protein OS=Acanthamoeba castellanii GN=TFIID PE=2
SV=1
Length = 258
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/154 (87%), Positives = 143/154 (92%)
Query: 17 GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 76
G VP LQNIVSTVNLGCKLDLK IALHARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 80 GIVPTLQNIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 139
Query: 77 VCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQ 136
VCTGAKSEE SRLAARKYARIIQKLGF AKFLDFKIQN+VGSCDV+FPIRLEGL H
Sbjct: 140 VCTGAKSEEASRLAARKYARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNH 199
Query: 137 FSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
+ SYEPELFPGLIYRMV+P+IVLLIFVSGK+VLT
Sbjct: 200 YCSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLT 233
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 174 KIQNIVGSCDVRFPIRLEGLAFAHNHYCSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLT 233
Query: 80 GAKSEED 86
GAK E+
Sbjct: 234 GAKVREE 240
>sp|P32085|TBP_CAEEL TATA-box-binding protein OS=Caenorhabditis elegans GN=tbp-1 PE=2
SV=1
Length = 340
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/165 (82%), Positives = 150/165 (90%), Gaps = 2/165 (1%)
Query: 6 PGPPMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPR 65
P P + +D+ +P LQNIVSTVNLG +LDLKKIALHARNAEYNPKRFAAVIMRIREPR
Sbjct: 154 PATPASQLDI--PMPALQNIVSTVNLGVQLDLKKIALHARNAEYNPKRFAAVIMRIREPR 211
Query: 66 TTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPI 125
TTALIFSSGKMVCTGAKSEE SRLAARKYARI+QKLGF AKF +F +QNMVGSCDV+FPI
Sbjct: 212 TTALIFSSGKMVCTGAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPI 271
Query: 126 RLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
+LEGL +TH QFS+YEPELFPGLIYRMVKPR+VLLIFVSGKVV+T
Sbjct: 272 QLEGLCITHSQFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVIT 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 22 LQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 80
+QN+V + ++ + L+ + + H++ + Y P+ F +I R+ +PR LIF SGK+V TG
Sbjct: 258 VQNMVGSCDVRFPIQLEGLCITHSQFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITG 317
Query: 81 AKSEED 86
AK++ D
Sbjct: 318 AKTKRD 323
>sp|P50158|TBP1_MAIZE TATA-box-binding protein 1 OS=Zea mays GN=TBP1 PE=2 SV=1
Length = 200
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/163 (84%), Positives = 147/163 (90%), Gaps = 4/163 (2%)
Query: 12 PVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 131 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Query: 80 GAKSEEDSRLA 90
GAK E++ A
Sbjct: 174 GAKVREETYTA 184
>sp|A6H909|TBPL2_RAT TATA box-binding protein-like protein 2 OS=Rattus norvegicus
GN=Tbpl2 PE=2 SV=1
Length = 344
Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 148/163 (90%), Gaps = 1/163 (0%)
Query: 9 PMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PM PV + G VPQLQN+VST NL CKLDL+KIAL+A+N EYNPKRFAAVIMRIREPRTT
Sbjct: 157 PMNPVTECSGIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTT 216
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIFSSGK+VCTGAKSE++SRLAARKYAR++QKLGFP +F +FKIQNMV SCDVKFPIRL
Sbjct: 217 ALIFSSGKVVCTGAKSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRL 276
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
E L LTH QFSSYEPELFPGLIY+MVKP++VLLIF SGKVVLT
Sbjct: 277 EILALTHRQFSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLT 319
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V++ ++ + L+ +AL H + + Y P+ F +I ++ +P+ LIF+SGK+V T
Sbjct: 260 KIQNMVASCDVKFPIRLEILALTHRQFSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLT 319
Query: 80 GAK 82
GAK
Sbjct: 320 GAK 322
>sp|P13393|TBP_YEAST TATA-box-binding protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPT15 PE=1 SV=3
Length = 240
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 144/155 (92%)
Query: 16 GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 75
G VP LQNIV+TV LGC+LDLK +ALHARNAEYNPKRFAAVIMRIREP+TTALIF+SGK
Sbjct: 61 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 120
Query: 76 MVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHG 135
MV TGAKSE+DS+LA+RKYARIIQK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +HG
Sbjct: 121 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 180
Query: 136 QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
FSSYEPELFPGLIYRMVKP+IVLLIFVSGK+VLT
Sbjct: 181 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLT 215
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 156 KIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLT 215
Query: 80 GAKSEED 86
GAK E+
Sbjct: 216 GAKQREE 222
>sp|Q8W0W4|TBP2_ORYSJ TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1
SV=2
Length = 203
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 147/163 (90%), Gaps = 4/163 (2%)
Query: 12 PVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G +P LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 14 PVDLAKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 73
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 74 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 133
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 134 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 176
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 117 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 176
Query: 80 GAKSEEDSRLA 90
GAK +++ A
Sbjct: 177 GAKVRDETYTA 187
>sp|P50159|TBP2_MAIZE TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1
Length = 200
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/163 (84%), Positives = 147/163 (90%), Gaps = 4/163 (2%)
Query: 12 PVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 131 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Query: 80 GAKSEEDSRLA 90
GAK E++ A
Sbjct: 174 GAKVREETYTA 184
>sp|P48511|TBP_MESCR TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1
Length = 200
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 147/163 (90%), Gaps = 1/163 (0%)
Query: 9 PMTPVDM-GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
P+ P+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 131 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Query: 80 GAKSEEDSRLA 90
GAK E++ A
Sbjct: 174 GAKVREETYTA 184
>sp|Q42808|TBP_SOYBN TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1
Length = 200
Score = 279 bits (713), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 147/163 (90%), Gaps = 4/163 (2%)
Query: 12 PVDM----GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIR+P+TT
Sbjct: 11 PVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 131 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Query: 80 GAKSEEDSRLA 90
GAK +++ A
Sbjct: 174 GAKVRDETYTA 184
>sp|Q02879|TBP2_WHEAT TATA-box-binding protein 2 OS=Triticum aestivum GN=TBP2 PE=2 SV=1
Length = 201
Score = 279 bits (713), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 146/163 (89%), Gaps = 4/163 (2%)
Query: 12 PVDM----GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G +P LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 12 PVDLTKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 71
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+V SCDVKFPIRL
Sbjct: 72 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRL 131
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 132 EGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLT 174
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV++ ++ + L+ +A H + Y P+ F +I R+R+P+ LIF SGK+V T
Sbjct: 115 KIQNIVASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLT 174
Query: 80 GAKSEEDS 87
GAK E++
Sbjct: 175 GAKVREET 182
>sp|P26357|TBP_SOLTU TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1
Length = 200
Score = 279 bits (713), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 146/163 (89%), Gaps = 4/163 (2%)
Query: 12 PVDM----GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+V+T
Sbjct: 131 EGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 173
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVIT 173
Query: 80 GAKSEEDSRLA 90
GAK +++ A
Sbjct: 174 GAKVRDETYTA 184
>sp|P93348|TBP_TOBAC TATA-box-binding protein OS=Nicotiana tabacum PE=2 SV=1
Length = 200
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 146/163 (89%), Gaps = 4/163 (2%)
Query: 12 PVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE+ S+LAARKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLLIFVSGK+VLT
Sbjct: 131 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 173
Query: 80 GAKSEEDSRLA 90
GAK +++ A
Sbjct: 174 GAKVRDETYTA 184
>sp|Q6SJ95|TBPL2_MOUSE TATA box-binding protein-like protein 2 OS=Mus musculus GN=Tbpl2
PE=1 SV=1
Length = 350
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 148/164 (90%), Gaps = 2/164 (1%)
Query: 9 PMTPV-DMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PM PV G VPQLQN+VST NL CKLDL+KIAL+A+N EYNPKRFAAVIMRIREPRTT
Sbjct: 162 PMNPVPGFSGIVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTT 221
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIFSSGK+VCTGAKSEE+SRLAARKYAR++QKLGFP +F +FKIQNMVGSCDVKFPIRL
Sbjct: 222 ALIFSSGKVVCTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRL 281
Query: 128 EGLVLTHGQF-SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
E L LTH QF SSYEPELFPGLIY+MVKP++VLLIF SGKVVLT
Sbjct: 282 EILALTHRQFSSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLT 325
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 21 QLQNIVSTVNLGCKLDLKKIALHAR--NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 78
++QN+V + ++ + L+ +AL R ++ Y P+ F +I ++ +P+ LIF+SGK+V
Sbjct: 265 KIQNMVGSCDVKFPIRLEILALTHRQFSSSYEPELFPGLIYKMVKPQVVLLIFASGKVVL 324
Query: 79 TGAKSEED 86
TGAK +
Sbjct: 325 TGAKERSE 332
>sp|P26356|TBP1_WHEAT TATA-box-binding protein 1 OS=Triticum aestivum GN=TBP1 PE=2 SV=1
Length = 233
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 146/163 (89%), Gaps = 4/163 (2%)
Query: 12 PVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL C+LDLK+IAL ARNAEYNPKRFAAVIMRIR+P+TT
Sbjct: 44 PVDLARHPSGIVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTT 103
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSEE S+LAARKYARI+QKLGFPA F DFKIQN+V SCDVKFPIRL
Sbjct: 104 ALIFASGKMVCTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRL 163
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +HG FSSYEPELFPGLIYRM +P+IVLL+FVSGK+VLT
Sbjct: 164 EGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLT 206
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV++ ++ + L+ +A H + Y P+ F +I R+++P+ L+F SGK+V T
Sbjct: 147 KIQNIVASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLT 206
Query: 80 GAKSEED 86
GAK ++
Sbjct: 207 GAKVRDE 213
>sp|Q12731|TBP_EMENI TATA-box-binding protein OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tbpA PE=2
SV=1
Length = 268
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 147/169 (86%), Gaps = 1/169 (0%)
Query: 3 PSTPGP-PMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRI 61
P+TP P G VP LQNIV+TVNL C+LDLK IALHARNAEYNPKRFAAVIMRI
Sbjct: 75 PATPAATPGASAPGSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRI 134
Query: 62 REPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDV 121
REP+TTALIF+SGKMV TGAKSE+DS+LA+RKYARIIQKLGF AKF DFKIQN+VGSCD+
Sbjct: 135 REPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDI 194
Query: 122 KFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
KFPIRLEGL H FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLT
Sbjct: 195 KFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLT 243
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIALHARN-AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A N + Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 184 KIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLT 243
Query: 80 GAKSEED 86
GAK E+
Sbjct: 244 GAKVREE 250
>sp|P17871|TBP_SCHPO TATA-box-binding protein OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tbp1 PE=3 SV=1
Length = 231
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/156 (82%), Positives = 143/156 (91%)
Query: 15 MGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 74
+ G VP LQNIV+TVNL C+LDLK IALHARNAEYNPKRFAAVIMRIREP++TALIF+SG
Sbjct: 51 VSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASG 110
Query: 75 KMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH 134
KMV G KSE+DS+LA+RKYARIIQKLGF AKF DFKIQN+VGSCDVKFPIRLEGL +H
Sbjct: 111 KMVVLGGKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSH 170
Query: 135 GQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
G FSSYEPELFPGLIYRMVKP++VLLIFVSGK+VLT
Sbjct: 171 GTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLT 206
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 147 KIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLT 206
Query: 80 GAKSEED 86
GAK E+
Sbjct: 207 GAKVREE 213
>sp|P28147|TBP1_ARATH TATA-box-binding protein 1 OS=Arabidopsis thaliana GN=TBP1 PE=1
SV=1
Length = 200
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 145/164 (88%), Gaps = 4/164 (2%)
Query: 11 TPVDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRT 66
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+T
Sbjct: 10 NPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKT 69
Query: 67 TALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIR 126
TALIF+SGKMVCTGAKSE+ S++AARKYARI+QKLGFPAKF DFKIQN+VGSCDVKFPIR
Sbjct: 70 TALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIR 129
Query: 127 LEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
LEGL +H FSSYEPELFPGLIYRM P+IVLLIFVSGK+V+T
Sbjct: 130 LEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVIT 173
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A HA + Y P+ F +I R++ P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVIT 173
Query: 80 GAKSEEDSRLA 90
GAK +++ A
Sbjct: 174 GAKMRDETYKA 184
>sp|P28148|TBP2_ARATH TATA-box-binding protein 2 OS=Arabidopsis thaliana GN=TBP2 PE=1
SV=1
Length = 200
Score = 273 bits (697), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 144/163 (88%), Gaps = 4/163 (2%)
Query: 12 PVDM----GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 67
PVD+ G VP LQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TT
Sbjct: 11 PVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTT 70
Query: 68 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRL 127
ALIF+SGKMVCTGAKSE S+LAARKYARI+QKLGFPAKF DFKIQN+VGSCDVKFPIRL
Sbjct: 71 ALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRL 130
Query: 128 EGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
EGL +H FSSYEPELFPGLIYRM P+IVLLIFVSGK+V+T
Sbjct: 131 EGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVIT 173
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H+ + Y P+ F +I R++ P+ LIF SGK+V T
Sbjct: 114 KIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVIT 173
Query: 80 GAKSEEDSRLA 90
GAK E++ A
Sbjct: 174 GAKMREETYTA 184
>sp|O43133|TBP_CANAL TATA-box-binding protein OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=TBP1 PE=2 SV=1
Length = 238
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/152 (84%), Positives = 140/152 (92%)
Query: 19 VPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 78
VP LQNIV+TVNL C+LDLK IALHARNAEYNPKRFAAVIMRIR+P+TTALIF+SGKMV
Sbjct: 62 VPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVV 121
Query: 79 TGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFS 138
TGAKSE+DS+LA+RKYARIIQKLGF AKF DFKIQN+VGS DVKF IRLEGL HG FS
Sbjct: 122 TGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTFS 181
Query: 139 SYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
SYEPELFPGLIYRMVKP+IVLLIFVSGK+VLT
Sbjct: 182 SYEPELFPGLIYRMVKPKIVLLIFVSGKIVLT 213
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + L+ +A H + Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 154 KIQNIVGSTDVKFAIRLEGLAFAHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLT 213
Query: 80 GAKSEED 86
GAK E+
Sbjct: 214 GAKKREE 220
>sp|P46272|TBP_ACECL TATA-box-binding protein OS=Acetabularia cliftonii PE=2 SV=1
Length = 191
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 145/162 (89%), Gaps = 4/162 (2%)
Query: 13 VDMG----GSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTA 68
VDM G +P+LQN+VSTVNLGC L+LK+IA+ ARNAEYNPKRFAAVIMRIR+P+TTA
Sbjct: 5 VDMSLHPSGIIPELQNVVSTVNLGCTLELKEIAMQARNAEYNPKRFAAVIMRIRDPKTTA 64
Query: 69 LIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLE 128
LIF SGKMVCTGAKSE+DSR AARKYA+I+QKLGFPAKF +FKIQN+VGSCDVKFPIR+E
Sbjct: 65 LIFGSGKMVCTGAKSEQDSRTAARKYAKIVQKLGFPAKFTEFKIQNIVGSCDVKFPIRME 124
Query: 129 GLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
L H QF SYEPELFPGLIYRM++P+IVLLIFVSGKVVLT
Sbjct: 125 PLAYQHQQFCSYEPELFPGLIYRMLQPKIVLLIFVSGKVVLT 166
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ + ++ +A H + Y P+ F +I R+ +P+ LIF SGK+V T
Sbjct: 107 KIQNIVGSCDVKFPIRMEPLAYQHQQFCSYEPELFPGLIYRMLQPKIVLLIFVSGKVVLT 166
Query: 80 GAKSEED 86
GAK +
Sbjct: 167 GAKERTE 173
>sp|P26355|TBP_DICDI TATA-box-binding protein OS=Dictyostelium discoideum GN=tbpA PE=2
SV=2
Length = 205
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 137/155 (88%)
Query: 16 GGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 75
G +P LQNIVSTVN+ +LDLK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF SGK
Sbjct: 21 SGIIPTLQNIVSTVNMATELDLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGK 80
Query: 76 MVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHG 135
MVCTGAKSE+ SR AARKYARIIQKL FPA+F DFKIQN+VGSCDVKFPI+LE L H
Sbjct: 81 MVCTGAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHT 140
Query: 136 QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
F++YEPE+FPGLIY+M++P++VLLIFVSGK+VLT
Sbjct: 141 SFTNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVLT 175
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 21 QLQNIVST--VNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 78
++QNIV + V KL+L A H Y P+ F +I ++ +P+ LIF SGK+V
Sbjct: 116 KIQNIVGSCDVKFPIKLELLHNA-HTSFTNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVL 174
Query: 79 TGAKSEED 86
TGAK E+
Sbjct: 175 TGAKVREE 182
>sp|Q27850|TBP_TETTH TATA-box-binding protein OS=Tetrahymena thermophila PE=3 SV=1
Length = 246
Score = 243 bits (621), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 130/151 (86%)
Query: 20 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
P+LQNIVSTVNL KLDLK+IAL ARNAEYNPKRFAAVIMR+R+P+TTALIF+SGKMVCT
Sbjct: 51 PKLQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMVCT 110
Query: 80 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 139
GAK+EEDS AARKYA+IIQK+GFP +F DFKIQN+VGS DVKFPI L+ L H +F
Sbjct: 111 GAKTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKFVQ 170
Query: 140 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
YEPE+FPG IYR +IVLLIFVSGK+VLT
Sbjct: 171 YEPEIFPGKIYREFNTKIVLLIFVSGKIVLT 201
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QNIV + ++ ++L + H + +Y P+ F I R + LIF SGK+V T
Sbjct: 142 KIQNIVGSTDVKFPINLDHLEQDHKKFVQYEPEIFPGKIYREFNTKIVLLIFVSGKIVLT 201
Query: 80 GAKSEEDSRLAARK 93
GAK+ E+ A +K
Sbjct: 202 GAKTRENINKAFQK 215
>sp|Q27896|TRF_DROME TBP-related factor OS=Drosophila melanogaster GN=Trf PE=2 SV=1
Length = 224
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 1 MSPSTPGPPMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMR 60
+ P P + P D + +LQNIV+T ++ C+LDLK I RN+EY+PKRF VIMR
Sbjct: 31 LQPQQPVALVEPKDAQHEI-RLQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMR 89
Query: 61 IREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCD 120
+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QKLGFP KF+++K+QN+V + D
Sbjct: 90 MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVD 149
Query: 121 VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
++FPIRLE L HGQFSSYEPE+FPGLIYRMVKPRIVLLIFV+GKVV T
Sbjct: 150 LRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKKI-ALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 80 GAKSEED 86
GAKS +D
Sbjct: 200 GAKSRKD 206
>sp|A7UFC2|TBPL1_ENTHI TATA-box-binding protein-like protein 1 OS=Entamoeba histolytica
GN=trf1 PE=3 SV=1
Length = 216
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 116/151 (76%)
Query: 20 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
P +QNIV+TV L C ++L+ + RNAEYNPKRF A+I+RI P+TTAL+F SGK+V T
Sbjct: 39 PVIQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVVT 98
Query: 80 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 139
G K+ +DSRLA RKYARI+Q+LG+ KF FKIQN+V SCD+KF I L+ L+ + +
Sbjct: 99 GGKTVDDSRLAGRKYARILQRLGYNVKFNHFKIQNVVASCDMKFAISLKELIQLAPKITK 158
Query: 140 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
YEPE+FPG++YR+ P++VLLIF SGK+V T
Sbjct: 159 YEPEIFPGVVYRLADPKMVLLIFASGKIVFT 189
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKK-IALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
++QN+V++ ++ + LK+ I L + +Y P+ F V+ R+ +P+ LIF+SGK+V T
Sbjct: 130 KIQNVVASCDMKFAISLKELIQLAPKITKYEPEIFPGVVYRLADPKMVLLIFASGKIVFT 189
Query: 80 GAKSEEDSRLAARKYARIIQKLG 102
G K E A + +I+ ++
Sbjct: 190 GGKEIEQINKAFSEIYKILLQVA 212
>sp|C4M7H7|TBP2_ENTHI TATA-box-binding protein 2 OS=Entamoeba histolytica GN=EHI_112050
PE=3 SV=1
Length = 212
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%)
Query: 1 MSPSTPGPPMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMR 60
MS ST + + + P++ N+VST LG KL+L+KI ARNAEYNPKRFA IMR
Sbjct: 13 MSTSTESQERSLNNPNDTHPEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMR 72
Query: 61 IREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCD 120
I P++TALIF +GK+VCTG +S E+S++A++KYA+II+K+G+P + +F +QN+VGSCD
Sbjct: 73 ISSPKSTALIFQTGKIVCTGTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCD 132
Query: 121 VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
VKF I L LV ++ F YEPE+FPGL+YRM P++ LL+F +GKVVLT
Sbjct: 133 VKFQIALRTLVDSYLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLT 182
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKK-IALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
+QNIV + ++ ++ L+ + + +Y P+ F ++ R+ P+ T L+FS+GK+V T
Sbjct: 123 NVQNIVGSCDVKFQIALRTLVDSYLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLT 182
Query: 80 GAKSEEDSRLAARK 93
GAK EE LA +
Sbjct: 183 GAKDEESLNLAYKN 196
>sp|P52653|TBP1_ENTHI TATA-box-binding protein 1 OS=Entamoeba histolytica GN=TBP PE=3
SV=2
Length = 234
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%)
Query: 1 MSPSTPGPPMTPVDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMR 60
MS ST + + + P++ N+VST LG KL+L+KI ARNAEYNPKRFA IMR
Sbjct: 35 MSTSTESQERSLNNPNDTHPEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMR 94
Query: 61 IREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCD 120
I P++TALIF +GK+VCTG +S E+S++A++KYA+II+K+G+P + +F +QN+VGSCD
Sbjct: 95 ISSPKSTALIFQTGKIVCTGTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCD 154
Query: 121 VKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
VKF I L LV ++ F YEPE+FPGL+YRM P++ LL+F +GKVVLT
Sbjct: 155 VKFQIALRTLVDSYLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLT 204
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 21 QLQNIVSTVNLGCKLDLKK-IALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 79
+QNIV + ++ ++ L+ + + +Y P+ F ++ R+ P+ T L+FS+GK+V T
Sbjct: 145 NVQNIVGSCDVKFQIALRTLVDSYLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLT 204
Query: 80 GAKSEEDSRLAARK 93
GAK EE LA +
Sbjct: 205 GAKDEESLNLAYKN 218
>sp|A1RSQ1|TBP_PYRIL TATA-box-binding protein OS=Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189) GN=tbp PE=3 SV=1
Length = 199
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 110/159 (69%), Gaps = 2/159 (1%)
Query: 13 VDMGGSVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 72
++ GG +++NIV+TVNLG +LDL+K+A AEYNP +F +I+R+ +PR +ALIF
Sbjct: 1 MESGGPTYRIENIVATVNLGVELDLEKLAERLAMAEYNPDQFPGLILRLTKPRISALIFR 60
Query: 73 SGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFL-DFKIQNMVGSCDVKFPIRLEGLV 131
+GKMVCTGAK+EED + A R ++++ G F + ++QN+V S ++ + LE V
Sbjct: 61 TGKMVCTGAKNEEDLKNAVRALVKLLRDHGAEVPFDPEVQVQNIVASGNLHAEVDLEQAV 120
Query: 132 LTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 170
L + + YEPE FPGLIYRM PR+V+LIF SGK+V T
Sbjct: 121 LML-ENAMYEPEQFPGLIYRMSSPRVVMLIFGSGKIVCT 158
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 14 DMGGSVP-----QLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTA 68
D G VP Q+QNIV++ NL ++DL++ L NA Y P++F +I R+ PR
Sbjct: 88 DHGAEVPFDPEVQVQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVM 147
Query: 69 LIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLG 102
LIF SGK+VCTGAKSE D A +K ++ LG
Sbjct: 148 LIFGSGKIVCTGAKSERDVATAVQKLYNQLKDLG 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,744,822
Number of Sequences: 539616
Number of extensions: 2365230
Number of successful extensions: 5804
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5385
Number of HSP's gapped (non-prelim): 236
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)